Psyllid ID: psy7482

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------
Protein Sequence
KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPVV
Secondary Structure (PSIPRED)
cEEEEEEcEEccccEEEEEEcccccEEEEEcccccEEEEEccccEEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEEEccccccccccEEEEEEcccccEEEEEEcccEEEEEcccccEEEEEcccccEEEEEEccccEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEEcccccccEEEEEcccccEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEccccEEEEEcccccccccEEEEccccccEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEccccccEEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEccccccccccEEEEEEcccccEEEEccccEEEEEEcccccEEEEEEccccEEEEEEccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEEccccccEEEEEccccEEEEEEcccccEEEEEccccccEEEEEEcccccEEcccccEEEEEEcccccEEEEEEEEcccccccEEEEEEccccc
Coil and Loop (DISEMBL)
KYTLTQTFVTHSHTASVRSVAATSKLaassgadeTVVLYDMVKRkqsgalmqhegtitclkftpegshliscsddgsiaIFRVGSWQLEKLFKKAHkgtavnhisihpsgklalsvgkdktlrtwNLVKGRSAYITNlssygvgfenldsvvwspegllyaipiqnkAVVFSVEKAGVLQTLKSESKVHSVCFLnettvctgneesaitaynltdgshlWQIKASASRIKGLvffsipqettvctgneesaitaynltdgshlwHIKASASRIKGLASHRNHLICITSAGDLVVWELnedvtrepqrvsatndgcrftclairppvv
Flexible Loop (DISEMBL)
kytltqtfvthshtasvrsvaatsklaassgadetVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTavnhisihpsgklalsvgKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTlkseskvhsvCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVtrepqrvsatndgcrftclairppvv
Low Complexity Region (SEG)
KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPVV
Disordered region (IsUnstruct)
*********************************ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAI*****
Disordered Region (DISOPRED)
KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV*
Disordered Region (DISEMBL)
KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPVV
Disordered Region (DISPRO)
KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPVV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	327	2.2.26 [Sep-21-2011]
Q9NWT1	392	p21-activated protein kin	yes	N/A	0.834	0.696	0.369	4e-49
Q9DCE5	382	p21-activated protein kin	yes	N/A	0.755	0.646	0.402	2e-46
Q5ZKU8	369	p21-activated protein kin	yes	N/A	0.755	0.669	0.398	9e-46
Q5EA99	392	p21-activated protein kin	yes	N/A	0.813	0.678	0.352	3e-45
Q6TNS2	368	p21-activated protein kin	yes	N/A	0.844	0.75	0.316	4e-45
Q68FJ6	363	p21-activated protein kin	N/A	N/A	0.737	0.663	0.376	7e-43
P20484	468	Protein MAK11 OS=Saccharo	yes	N/A	0.850	0.594	0.253	2e-20
O74453	341	Shk1 kinase-binding prote	yes	N/A	0.703	0.674	0.242	4e-16
Q8YRI1	1526	Uncharacterized WD repeat	no	N/A	0.737	0.157	0.239	2e-11
Q9VU65	391	POC1 centriolar protein h	no	N/A	0.660	0.552	0.254	1e-10

>sp|Q9NWT1|PK1IP_HUMAN p21-activated protein kinase-interacting protein 1 OS=Homo sapiens GN=PAK1IP1 PE=1 SV=2

 Score =  195 bits (495), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/322 (36%), Positives = 168/322 (52%), Gaps = 49/322 (15%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           ++TL   F  H+HTAS+ +VA  S+   +   DET+ +YDM K+ + GAL+ H GTITCL
Sbjct: 29  QWTLVADFTHHAHTASLSAVAVNSRFVVTGSKDETIHIYDMKKKIEHGALVHHSGTITCL 88

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
           KF     HLIS ++DG I I+    W+  K   KAHKG  V  +SIHPSGKLALSVG DK
Sbjct: 89  KFYG-NRHLISGAEDGLICIWDAKKWECLKSI-KAHKGQ-VTFLSIHPSGKLALSVGTDK 145

Query: 121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQ 180
           TLRTWNLV+GRSA+I N+       +N   V WSP G  Y + IQNK  ++ ++ A +  
Sbjct: 146 TLRTWNLVEGRSAFIKNIK------QNAHIVEWSPRGEQYVVIIQNKIDIYQLDTASISG 199

Query: 181 TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE 240
           T+ +E ++ SV FL+E+ +    +E  I  ++      L + KA  +R+K +  F IP+ 
Sbjct: 200 TITNEKRISSVKFLSESVLAVAGDEEVIRFFDCDSLVCLCEFKAHENRVKDMFSFEIPEH 259

Query: 241 TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNED 300
                                   H+  SAS                S G + +W+L +D
Sbjct: 260 ------------------------HVIVSAS----------------SDGFIKMWKLKQD 279

Query: 301 VTREPQRVSATNDGCRFTCLAI 322
               P  +   N   R TCL +
Sbjct: 280 KKVPPSLLCEINTNARLTCLGV 301

Negatively regulates the PAK1 kinase. PAK1 is a member of the PAK kinase family, which have been shown to play a positive role in the regulation of signaling pathways involving MAPK8 and RELA. PAK1 exists as an inactive homodimer, which is activated by binding of small GTPases such as CDC42 to an N-terminal regulatory domain. PAK1IP1 also binds to the N-terminus of PAK1, and inhibits the specific activation of PAK1 by CDC42.
Homo sapiens (taxid: 9606)

>sp|Q9DCE5|PK1IP_MOUSE p21-activated protein kinase-interacting protein 1 OS=Mus musculus GN=Pak1ip1 PE=2 SV=2

 Score =  186 bits (473), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/256 (40%), Positives = 151/256 (58%), Gaps = 9/256 (3%)

Query: 2   YTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLK 61
           +T    F  HSHTAS+  +A+ S+   S   DET+ +YDM ++ + GAL+ H GT+TCLK
Sbjct: 30  WTPVADFTHHSHTASLSVLASNSRYVVSGSKDETIHIYDMKRKVEHGALVHHAGTVTCLK 89

Query: 62  FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121
           F     HLIS ++DG I I+ V  W+  K FK AH+G  V  +SIHPSGKLALSVG DKT
Sbjct: 90  FH-GNQHLISGAEDGHICIWDVKRWKCLKTFK-AHRG-HVTFLSIHPSGKLALSVGTDKT 146

Query: 122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQT 181
           LRTWNL++GRSA+I N+       EN   V WSP G  Y + +QNK  V+ +  A V  T
Sbjct: 147 LRTWNLIEGRSAFIKNIK------ENAHIVEWSPSGGKYIVVVQNKVDVYRLGTASVSGT 200

Query: 182 LKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET 241
           + +  ++ SV FL+++ +    +E  +  ++      L + +A  +R+K +V F +P   
Sbjct: 201 ITNGKRISSVTFLSDSVLAVAGDEEVVRIFDCDSLECLCEFRAHENRVKDMVSFEVPDHH 260

Query: 242 TVCTGNEESAITAYNL 257
            + T + +  I  + L
Sbjct: 261 VLVTASNDGFIKMWTL 276

Negatively regulates the PAK1 kinase. PAK1 is a member of the PAK kinase family, which have been shown to play a positive role in the regulation of signaling pathways involving MAPK8 and RELA. PAK1 exists as an inactive homodimer, which is activated by binding of small GTPases such as CDC42 to an N-terminal regulatory domain. PAK1IP1 also binds to the N-terminus of PAK1, and inhibits the specific activation of PAK1 by CDC42.

Mus musculus (taxid: 10090)

>sp|Q5ZKU8|PK1IP_CHICK p21-activated protein kinase-interacting protein 1-like OS=Gallus gallus GN=PAK1IP1 PE=2 SV=1

 Score =  184 bits (466), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 102/256 (39%), Positives = 151/256 (58%), Gaps = 9/256 (3%)

Query: 2   YTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLK 61
           +T+T  F  H+HTAS+ +VA  SK   +   DE++ +YDM K+ + GAL+QH GTITCL+
Sbjct: 23  WTVTPDFTHHAHTASLSAVAVNSKYVVTGSRDESIQIYDMRKKVEHGALLQHNGTITCLE 82

Query: 62  FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121
           F    +HL+S ++DG I I+    W+  K   KAHKG  V  +SIHPSGKLALSVG DKT
Sbjct: 83  FYGT-AHLLSGAEDGLICIWNTKRWECLKSI-KAHKG-HVTSLSIHPSGKLALSVGTDKT 139

Query: 122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQT 181
           LRTWNLV+GRSA+I NL       +N   + WSP+G  Y   I NK  ++ ++ A +  T
Sbjct: 140 LRTWNLVEGRSAFIKNLK------QNAHIIKWSPDGEKYVTVITNKVDIYKLDTASITGT 193

Query: 182 LKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET 241
           +  E ++ S+ F+ ++ +    ++  I  Y+      L + KA  +RIK +  F    + 
Sbjct: 194 ITIEKRISSIRFITDSVLAIAGDDEIIRFYSCDSQKCLCEFKARENRIKDIYSFEREGQH 253

Query: 242 TVCTGNEESAITAYNL 257
            + T + +  I  +NL
Sbjct: 254 VIVTASSDGYIKVWNL 269

Negatively regulates the PAK1 kinase.

Gallus gallus (taxid: 9031)

>sp|Q5EA99|PK1IP_BOVIN p21-activated protein kinase-interacting protein 1 OS=Bos taurus GN=PAK1IP1 PE=2 SV=1

 Score =  182 bits (462), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 163/315 (51%), Gaps = 49/315 (15%)

Query: 8   FVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS 67
           F  H+HTAS+ +VA  S+   +   DET+ +YDM K+   GALM H GTITCLKF     
Sbjct: 36  FTHHAHTASLSAVAVNSRFVVTGSKDETIHIYDMKKKVDHGALMHHNGTITCLKFHG-NR 94

Query: 68  HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127
           HLIS ++DG I ++    W+  K   +AHKG  V  +SIHPSG+LALSVG DKTLRTWNL
Sbjct: 95  HLISGAEDGLICVWDARRWECLKSI-RAHKG-HVTFLSIHPSGRLALSVGTDKTLRTWNL 152

Query: 128 VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESK 187
           V+GRSA+I N+       ++   V WSP+G  Y + I N+  V+ ++ A V  T+ +E +
Sbjct: 153 VEGRSAFIKNIK------QSAHIVEWSPKGEKYVVVILNRIDVYQLDTASVSGTITNERR 206

Query: 188 VHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN 247
           V SV FL+E+ +    +E  +  ++    + L + KA  +R+K +  F  P+        
Sbjct: 207 VSSVTFLSESVLTVAGDEEVVRFFDCDSLTCLSEFKAHENRVKDMFSFETPEH------- 259

Query: 248 EESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQR 307
                            H+                L+  +S G + +W+L +D    P  
Sbjct: 260 -----------------HV----------------LVTASSDGFIKMWKLKQDKKVSPSL 286

Query: 308 VSATNDGCRFTCLAI 322
           +   N   R TCL +
Sbjct: 287 LCEINTNARLTCLGV 301

Negatively regulates the PAK1 kinase. The PAK kinase family have been shown to play a positive role in the regulation of signaling by pathways involving MAPK8 and RELA. PAK1 exists as an inactive homodimer, which is activated by binding of small GTPases such as CDC42 to an N-terminal regulatory domain. PAK1IP1 also binds to the N-terminus of PAK1, and inhibits the specific activation of PAK1 by CDC42.

Bos taurus (taxid: 9913)

>sp|Q6TNS2|PK1IP_DANRE p21-activated protein kinase-interacting protein 1-like OS=Danio rerio GN=pak1ip1 PE=2 SV=1

 Score =  182 bits (461), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 174/325 (53%), Gaps = 49/325 (15%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           ++T+  TF  H+HTAS+ +V+++++  A+   DET+ LYDM K+ + GAL+ H+GTI+CL
Sbjct: 34  EWTIEPTFTHHAHTASLNAVSSSNQFIATGSKDETIQLYDMCKKTEHGALLHHDGTISCL 93

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
           +F    SHL+S   DG I ++    W+  K   +AHKG  V  +S+HPSGKLALSVG DK
Sbjct: 94  EFYGT-SHLLSGGQDGLICVWSTKKWECLKTI-RAHKG-QVTSLSVHPSGKLALSVGTDK 150

Query: 121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQ 180
           TLRTWNL++GRSA+I N+       +N + V+WSP+G  YA+ + +K  +++++ A ++ 
Sbjct: 151 TLRTWNLIEGRSAFIKNIK------QNAEIVLWSPDGDKYAVVVNDKVDIYTLDSATIIG 204

Query: 181 TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE 240
           T+    ++  + FL  + +  G ++ ++  Y++T    + + KA  +R+K +  F    +
Sbjct: 205 TIAFTKRISCLKFLKNSLLAVGGDDESVRIYDVTSQKCVCEFKAHENRVKAIESF---MK 261

Query: 241 TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNED 300
              C                                      L+  ++ G + +W+LN +
Sbjct: 262 DDFCV-------------------------------------LVTASNDGFIKLWKLNLE 284

Query: 301 VTREPQRVSATNDGCRFTCLAIRPP 325
               P  +   N   R TCL +  P
Sbjct: 285 SIESPTLLGQLNTTARLTCLCVWMP 309

Negatively regulates the PAK1 kinase.

Danio rerio (taxid: 7955)

>sp|Q68FJ6|PK1IP_XENLA p21-activated protein kinase-interacting protein 1-like OS=Xenopus laevis GN=pak1ip1 PE=2 SV=1

 Score =  174 bits (442), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 145/250 (58%), Gaps = 9/250 (3%)

Query: 8   FVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS 67
           F  H+HTASV  +A  ++  A+   DET+ +YDM K+ + GAL+ H GTITCL+F    +
Sbjct: 34  FTHHAHTASVSVLAVNNRFVATGSRDETIQIYDMKKKVEHGALLHHNGTITCLEFYG-NT 92

Query: 68  HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127
           HL+S ++DG I ++    W+ ++ FK AHKG  ++ +SIHPSGKLALSVG DKTLRTWNL
Sbjct: 93  HLLSGAEDGLICVWNTKKWECQQTFK-AHKGQVLS-LSIHPSGKLALSVGTDKTLRTWNL 150

Query: 128 VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESK 187
           V+GRSA+I N+       +N   V WSP G  Y + I +   V+ +E A V+ T+ +  +
Sbjct: 151 VEGRSAFIKNIK------KNAHIVHWSPSGEKYVVVIHDTVDVYQLETAAVVGTINNPKR 204

Query: 188 VHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN 247
           + S  F+ +  +    +E  I  Y+      + + KA  +R+K L    +     V + +
Sbjct: 205 ISSAQFITDALIAVAGDEEVIRLYDTASQKCVCEFKAHENRVKNLHVIELQGTHVVVSSS 264

Query: 248 EESAITAYNL 257
            +  I  + +
Sbjct: 265 SDGYIKMWRI 274

Negatively regulates the PAK1 kinase.

Xenopus laevis (taxid: 8355)

>sp|P20484|MAK11_YEAST Protein MAK11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAK11 PE=1 SV=1

 Score =  100 bits (248), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 161/343 (46%), Gaps = 65/343 (18%)

Query: 8   FVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS 67
           F   +H+ S++ +A + +   S   DE + +YD+ KRK+ G L+ H+G+IT L+F+   S
Sbjct: 100 FHFQAHSLSIKCLAVSRRYLVSGSNDEHIRIYDLQKRKELGTLLSHQGSITALQFSHPAS 159

Query: 68  H---------------LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKL 112
                           L+S S+D  I ++RV  W+      K H    VN + IHP+ ++
Sbjct: 160 SSEDAAVSKGSKNSKWLLSASEDHKIMVWRVKDWETVGTL-KGHTA-RVNDVDIHPTNRI 217

Query: 113 ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW-SPEGLLYAIPIQNKAVVF 171
           A+SV  D ++R WNL+  R+A +  L  Y     N   V W   +G  +A+ ++++ +++
Sbjct: 218 AISVSDDHSIRLWNLMTLRNAAVLKLRKYNT---NGTCVRWLGAKGDYFAVGLRDRVLIY 274

Query: 172 SVEKAGVLQTLKSESK------VHSVCFLNETTVCTGNEESAITAYNLTDGS-HLWQIKA 224
               A V + +  + K       H + F N+  +  G          ++DG+ H +  + 
Sbjct: 275 ETGSAKVFKEIVFQRKTLMHIETHILPFDNKEYLSVG----------ISDGNVHFYPCEE 324

Query: 225 SASRIKGLVFFSIPQETTVCTGNEESAIT-AYNLTDGSHLWHIKASASRIKGLASHRN-- 281
                   +F  + +       +++  I+ A++L     L H     +RIK    + N  
Sbjct: 325 --------LFEKVEENEKQEDDDDKEDISPAFSL-----LGH----TNRIKDFKFYTNEF 367

Query: 282 --HLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAI 322
             +L+ I S G +VVW+++   T+E  +V+  + G R  CL +
Sbjct: 368 GTYLVTIGSDGKIVVWDMS---TKE--QVAVYDCGERLNCLTL 405

Essential for cell growth. Plays a role in assembly of 60S pre-ribosomal particles in the nucleolus. Also required for replication of the M1 double-stranded RNA of the L-A virus. This latter function may reflect an enhanced requirement for free 60S ribosomal particles for the translation of viral mRNAs which lack poly-A tails.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|O74453|SKB15_SCHPO Shk1 kinase-binding protein 15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=skb15 PE=4 SV=1

 Score = 85.9 bits (211), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 136/272 (50%), Gaps = 42/272 (15%)

Query: 12  SHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLK---FTPEGS 67
           +H  ++ ++A      AS+ +DET+ ++D  +  Q   + +  +    C++   FT   +
Sbjct: 33  AHEGALTALAVDGIYLASTSSDETIKIFDHTRNVQIADVSVPTDIANACIRDMCFTK--N 90

Query: 68  HLISCSDDGSIAIFRVGSWQLEKLFKKA-HKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126
           HL++C D+G I+++  GSW L    K + HKG  +  I++HPS KLAL+VG D  LR W+
Sbjct: 91  HLLACHDNGQISMWSKGSWLLVHTLKSSSHKG--ITGIAVHPSEKLALTVGGDGKLRLWD 148

Query: 127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV-------- 178
           LV+G+   +  LS+              PE +L+     N++    + + G+        
Sbjct: 149 LVRGKGGKVLPLSTI-------------PESILFL----NESSFVIMSRRGIDAFKLDLT 191

Query: 179 -LQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL----- 232
            L +  S+S+++++C L ++ +  G +   +   + +DG  L +  A   R+K +     
Sbjct: 192 SLFSFSSKSQLNALC-LYQSKLIVGRDNGTVLVLDTSDGKILHEFTAHKKRVKSVYPVDD 250

Query: 233 VFFSIPQETTVCTGNEE-SAITAYNLTDGSHL 263
              +   + +VC  +++ + +  +N+ +G+ +
Sbjct: 251 YLITASSDGSVCIWDKDWNLVIEHNIPEGNRI 282

Interacts with pak1/shk1.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 123/255 (48%), Gaps = 14/255 (5%)

Query: 11   HSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH 68
              HT+ V SV       + AS  +D+TV L+D+   K       H   +  + F P+GS 
Sbjct: 1239 QGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSM 1298

Query: 69   LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128
            L S S D ++ ++ + S +    F + H  + V+ ++  P G +  S   D+T+R W++ 
Sbjct: 1299 LASGSGDQTVRLWEISSSKCLHTF-QGHT-SWVSSVTFSPDGTMLASGSDDQTVRLWSIS 1356

Query: 129  KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAV-VFSVEKAGVLQTLKSESK 187
             G   Y     +  VG     SV++SP+G + A    ++ V ++S+     L TL+  + 
Sbjct: 1357 SGECLYTFLGHTNWVG-----SVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNN 1411

Query: 188  -VHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCT 245
             V S+ F  + T + +G+++  +  +N++ G  L+ +    + ++ + F S      + +
Sbjct: 1412 WVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSS--DGLILAS 1469

Query: 246  GNEESAITAYNLTDG 260
            G+++  I  +++  G
Sbjct: 1470 GSDDETIKLWDVKTG 1484

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q9VU65|POC1_DROME POC1 centriolar protein homolog OS=Drosophila melanogaster GN=Poc1 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 12/228 (5%)

Query: 12  SHTASVRSVAATSK--LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL 69
           SH+A V  VA + K  L AS+G D TV +++   R  SG  + H   +  + F   G  +
Sbjct: 58  SHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLM 117

Query: 70  ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129
           ++ SDD S  I+RV   Q    F  A +   V      P+GKL  +   DK++R +++  
Sbjct: 118 LTASDDKSAKIWRVARRQFVSSF--AQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDS 175

Query: 130 GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ-NKAVVFSVEKAGVLQTLKSES-K 187
           G    +   +        L    W P G + A+ +  N+  +F V  + +LQ     S  
Sbjct: 176 GEC--VRTFTEERAAPRQL---AWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAP 230

Query: 188 VHSVCF-LNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234
           V+ V F  +   + +G+++  I   +L +G  ++ +      +  + F
Sbjct: 231 VNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAF 278

Plays an important role in centriole formation.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
193678963	373	PREDICTED: p21-activated protein kinase-	0.825	0.723	0.413	3e-64
332031286	497	p21-activated protein kinase-interacting	0.703	0.462	0.484	7e-57
340717907	306	PREDICTED: p21-activated protein kinase-	0.715	0.764	0.451	2e-55
307208694	517	p21-activated protein kinase-interacting	0.840	0.531	0.399	9e-55
322794796	500	hypothetical protein SINV_07395 [Solenop	0.721	0.472	0.472	1e-54
350400307	306	PREDICTED: p21-activated protein kinase-	0.715	0.764	0.446	3e-54
383864157	479	PREDICTED: p21-activated protein kinase-	0.715	0.488	0.451	3e-54
328788130	487	PREDICTED: p21-activated protein kinase-	0.715	0.480	0.459	1e-53
380012738	375	PREDICTED: p21-activated protein kinase-	0.715	0.624	0.459	3e-53
307175895	498	p21-activated protein kinase-interacting	0.703	0.461	0.480	1e-52

>gi|193678963|ref|XP_001952263.1| PREDICTED: p21-activated protein kinase-interacting protein 1-like [Acyrthosiphon pisum]

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 131/317 (41%), Positives = 183/317 (57%), Gaps = 47/317 (14%)

Query: 4   LTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFT 63
           L Q+F  H H AS+RSV+ +SK   SS  DET+ +Y+MV+R     ++QH GT+T L FT
Sbjct: 32  LVQSFNDHVHQASIRSVSCSSKYMVSSSTDETIEVYNMVRRCHIHTILQHSGTVTSLAFT 91

Query: 64  PEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR 123
           P+ SHLIS SDDGSIA+F  G+W+L+KL+ KAHKG+AV+ +++HPSGKLALSVGKDKTLR
Sbjct: 92  PDESHLISTSDDGSIAMFETGTWKLKKLWDKAHKGSAVSFLAVHPSGKLALSVGKDKTLR 151

Query: 124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK 183
           TWNLVKGR AY TN SS    +   D+++WSP G  Y +P+  K ++F+VE AG+  T++
Sbjct: 152 TWNLVKGRPAYTTNQSSMS-SYYFFDNIIWSPAGQYYGLPLNTKLMIFNVETAGIAITIE 210

Query: 184 SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV 243
              K+H V F+ E  VC G+E  ++  YN+ +   +W+IK   +R+K L+          
Sbjct: 211 DSYKIHGVTFIEEHLVCYGSENGSLHCYNIINKESMWEIKIGDTRVKCLIKID------- 263

Query: 244 CTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTR 303
                                                N L+   S G + VWELN    +
Sbjct: 264 -------------------------------------NRLVTALSDGHVTVWELNG--CK 284

Query: 304 EPQRVSATNDGCRFTCL 320
           +P    +    CR TC+
Sbjct: 285 KPVESCSLFLDCRITCI 301

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332031286|gb|EGI70814.1| p21-activated protein kinase-interacting protein 1-like protein [Acromyrmex echinatior]

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 112/231 (48%), Positives = 152/231 (65%), Gaps = 1/231 (0%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +Y + ++F THSH +S+R+VA++    AS+GADETV LYDM  R++SG LM H+ TI C+
Sbjct: 33  EYKIEKSFATHSHVSSIRAVASSKYYLASAGADETVCLYDMRYRRESGKLMHHKDTINCI 92

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            FTPEGSHL +CS+DGSI + R G+WQLEK++  AHKG+AVN ++IHP+GKLALS G+D 
Sbjct: 93  AFTPEGSHLFACSNDGSITVVRCGNWQLEKVWSTAHKGSAVNTLAIHPTGKLALSTGEDG 152

Query: 121 TLRTWNLVKGRSAYITNL-SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            LRTWNL+KGR AY TNL S      + +  + WSP G  Y I +     ++SVE AG+ 
Sbjct: 153 VLRTWNLIKGRPAYATNLVSKLKSSAKRITIIKWSPNGEKYLIAVDGSIYIYSVESAGID 212

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIK 230
           + L  +SKV  V FL +  +  G E   I   +L    H    KA + R+K
Sbjct: 213 KELTFDSKVICVEFLKDDLIAVGFENGDIKFCDLRTSLHTMNTKAHSMRVK 263

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340717907|ref|XP_003397415.1| PREDICTED: p21-activated protein kinase-interacting protein 1-like [Bombus terrestris]

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 106/235 (45%), Positives = 151/235 (64%), Gaps = 1/235 (0%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +Y + ++F THSH +S+RSVA+   + AS GAD++V LYD+  R + G LM H  T+ C+
Sbjct: 27  EYNMVKSFATHSHVSSIRSVASNKNILASGGADDSVYLYDLHNRVEFGRLMHHNDTVNCI 86

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            FTP+ SHL SCS DG+IA  R G+WQ EK ++K HKG+AVN ++IHP+GK+ALS G D 
Sbjct: 87  AFTPDASHLFSCSSDGTIAAIRCGNWQTEKHWQKPHKGSAVNTLAIHPTGKIALSTGADG 146

Query: 121 TLRTWNLVKGRSAYITNL-SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            LRTWNLVKGR AY TNL     +   N++ + WSP G  Y + +  +  V+SVE AG+ 
Sbjct: 147 ILRTWNLVKGRQAYATNLVPRLRLDARNVNVLKWSPNGEKYLLAVNQRIDVYSVESAGID 206

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234
             +K +SK+  V FLN+  +  G E   I  Y+L     + ++ A  +R+K + F
Sbjct: 207 NEIKFDSKIICVEFLNDDLIAAGLENGQIKFYDLEKSVEIVEVVAHVNRVKCMAF 261

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307208694|gb|EFN85984.1| p21-activated protein kinase-interacting protein 1-like [Harpegnathos saltator]

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 176/323 (54%), Gaps = 48/323 (14%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +Y + ++F THSH AS+RSV ++    AS+GAD+ V LYD+  RK++G LM H  TI CL
Sbjct: 34  EYKVEKSFATHSHVASIRSVTSSKNYLASAGADDIVCLYDLRNRKETGKLMFHNDTINCL 93

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            FTPE SHL +CS+DGSIA  R G+WQ+EK ++KAHKG AVN ++IHP+GKLALS G D 
Sbjct: 94  AFTPEASHLFTCSNDGSIAAVRCGNWQIEKHWQKAHKGLAVNTLAIHPTGKLALSTGMDG 153

Query: 121 TLRTWNLVKGRSAYITNL-SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            LRTWNLVKGR AY  NL        +N+  + W+P G  Y + I  +  V+ VE AGV 
Sbjct: 154 ALRTWNLVKGRQAYAINLIPRMKYNAKNITIIRWNPNGDKYLLAINQEIYVYFVETAGVH 213

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQ 239
                ESK+  V FLN+  +  G E                QIK    R K         
Sbjct: 214 SEFTFESKIVCVEFLNDNMIAAGFENG--------------QIKFCDLRTKSPTL----- 254

Query: 240 ETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNE 299
                       +TA+++              R+K +A+  N L+  +S+G++ +W+ +E
Sbjct: 255 -----------EMTAHDI--------------RVKCIANINNLLVSASSSGEIKLWKYSE 289

Query: 300 DVTREPQRVSATNDGCRFTCLAI 322
                 Q V   N G R TCLA+
Sbjct: 290 HNLNMLQSV---NCGARITCLAL 309

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322794796|gb|EFZ17743.1| hypothetical protein SINV_07395 [Solenopsis invicta]

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 112/237 (47%), Positives = 151/237 (63%), Gaps = 1/237 (0%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +YT+ ++F TH+H AS+RSVA++    AS+GADET+ LYDM  R++SG L+ H+ TI C+
Sbjct: 33  EYTIEKSFATHNHIASIRSVASSKYHLASAGADETICLYDMRFRRESGKLVHHKDTINCI 92

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            FTPEGSHL SCS+DGSI+  R G+WQLEK++  AHKG+AVN ++IHP+GKLALS G+D 
Sbjct: 93  AFTPEGSHLFSCSNDGSISAVRCGNWQLEKVWPTAHKGSAVNTLAIHPTGKLALSTGQDG 152

Query: 121 TLRTWNLVKGRSAYITNL-SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            LRTWNL+KGR AY  NL        + +  + WSP G  Y +       V+SVE AG+ 
Sbjct: 153 VLRTWNLIKGRQAYAINLIPKLKSNAKWITVIKWSPSGERYLLAADGNIYVYSVETAGIE 212

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFS 236
           + L  +S V  V FL +  +  G E   I   NL    H    KA + R+K L   +
Sbjct: 213 KELTFDSNVVCVEFLKDNLIAVGFENGDIKFCNLKTSLHTINTKAHSMRVKCLAHMN 269

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350400307|ref|XP_003485793.1| PREDICTED: p21-activated protein kinase-interacting protein 1-like [Bombus impatiens]

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 105/235 (44%), Positives = 150/235 (63%), Gaps = 1/235 (0%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +Y + ++F THSH +S+RSVA+   + AS GAD++V LYD+  R + G LM H  T+ C+
Sbjct: 27  EYNMVKSFATHSHVSSIRSVASNKNILASGGADDSVYLYDLHNRVEFGRLMHHNDTVNCI 86

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            FTP+GSHL SCS DG+IA  R G+WQ EK ++K+HKG+AVN ++IHP+GK+ALS G D 
Sbjct: 87  AFTPDGSHLFSCSSDGTIAAIRCGNWQTEKHWQKSHKGSAVNTLAIHPTGKIALSTGADG 146

Query: 121 TLRTWNLVKGRSAYITNL-SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            LRTWNL+KGR AY TNL         N++ + WSP G  Y + +  +  V+SV+ AG+ 
Sbjct: 147 ILRTWNLIKGRQAYATNLVPRLRSDGRNVNILKWSPNGEKYLLAVNQRIDVYSVKSAGID 206

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234
             +K +SK+  V FLN+  +  G E   I  Y+L     + +  A   R+K + F
Sbjct: 207 NEIKFDSKIICVEFLNDDLIAAGLENGQIKFYDLEKSVEIVEAVAHDKRVKCMAF 261

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383864157|ref|XP_003707546.1| PREDICTED: p21-activated protein kinase-interacting protein 1-like [Megachile rotundata] gi|383866436|ref|XP_003708676.1| PREDICTED: p21-activated protein kinase-interacting protein 1-like [Megachile rotundata]

 Score =  218 bits (554), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 106/235 (45%), Positives = 150/235 (63%), Gaps = 1/235 (0%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +Y + +TF TH+HT+SVRSVA+     AS GAD++V LYDM  R +SG LM H  T+ C+
Sbjct: 27  EYKMERTFATHNHTSSVRSVASDKHYLASGGADDSVYLYDMRYRIESGRLMHHNDTVNCV 86

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            FTPE SHL +CS+DG+IA  + G+WQ+EK ++KAHKG  VN ++IHP+GK+ALS G D 
Sbjct: 87  AFTPEASHLFTCSNDGTIAAIKCGNWQMEKHWQKAHKGLGVNTLAIHPTGKIALSTGADG 146

Query: 121 TLRTWNLVKGRSAYITNL-SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            LRTWNL+KGR AY TNL     +  +N++ + WSP G  Y + +  +  V+SVE AG+ 
Sbjct: 147 ILRTWNLIKGRQAYATNLVPRLKLDAKNVNILKWSPNGEKYLLAVNQRIDVYSVELAGIG 206

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234
             +K  +K+  V FL +  +  G E   I  Y+L       +  A  +R+K + F
Sbjct: 207 SEIKFNAKIVCVEFLRDDLIAVGLENGQIKFYDLEKSVQTLEAIAHDTRVKCMAF 261

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788130|ref|XP_395312.3| PREDICTED: p21-activated protein kinase-interacting protein 1-like [Apis mellifera]

 Score =  216 bits (549), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 149/235 (63%), Gaps = 1/235 (0%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +Y + +TF THSH++S+RSVA+     AS GAD++V LYD+  R +SG L+ H  TI C+
Sbjct: 27  EYKMEKTFATHSHSSSIRSVASNKYYLASGGADDSVYLYDLRHRVESGRLIHHNDTINCI 86

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            FTPE SHL SCS+DG+IA  R G+WQLEK ++K HKG AVN ++IHP+GK+ALS G D 
Sbjct: 87  AFTPEASHLFSCSNDGTIAAVRCGNWQLEKHWQKPHKGLAVNTLAIHPTGKIALSTGADG 146

Query: 121 TLRTWNLVKGRSAYITNL-SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            LRTWNLVKGR AY  NL     +  +N++ + WSP G  Y + +  K  V+SVE AG+ 
Sbjct: 147 ILRTWNLVKGRQAYAINLVPRLKLDAKNVNVLKWSPNGEKYLMAVNQKIDVYSVELAGID 206

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234
             ++ +SK+  V FL +  +  G E   I  Y+L       +  A   R+K + F
Sbjct: 207 TEIEFDSKIVCVEFLQDDLIAVGLENGQIKFYDLEKSVQTVEAIAHDIRVKCMAF 261

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380012738|ref|XP_003690434.1| PREDICTED: p21-activated protein kinase-interacting protein 1-like, partial [Apis florea]

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 108/235 (45%), Positives = 147/235 (62%), Gaps = 1/235 (0%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +Y + +TF THSH  S+RSVA+     AS GAD++V LYD+  R +SG L+ H  TI C+
Sbjct: 27  EYKMEKTFATHSHANSIRSVASNKHYLASGGADDSVYLYDLRHRIESGRLVHHNDTINCI 86

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            FTPE SHL SCS+DG+IA  R G+WQLEK ++K HKG AVN ++IHP+GK+ALS G D 
Sbjct: 87  AFTPEASHLFSCSNDGTIAAIRCGNWQLEKHWQKPHKGLAVNTLAIHPTGKIALSTGADG 146

Query: 121 TLRTWNLVKGRSAYITNL-SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            LRTWNLVKGR AY  NL     +  +N++ + WSP G  Y + +  K  V+SVE AG+ 
Sbjct: 147 ILRTWNLVKGRQAYAINLVPRLKLDAKNVNVLKWSPNGEKYLMAVNQKIDVYSVELAGID 206

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF 234
             ++ +SK+  V FL +  +  G E   I  Y+L       +  A   R+K + F
Sbjct: 207 TEIEFDSKIVCVEFLQDDLIAVGLENGQIKFYDLEKSVQTVEAIAHDIRVKCMAF 261

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307175895|gb|EFN65710.1| p21-activated protein kinase-interacting protein 1-like [Camponotus floridanus]

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 111/231 (48%), Positives = 147/231 (63%), Gaps = 1/231 (0%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +Y + ++F THSH AS+RSV++     AS+GADETV LYDM  R++S  LM H+ TI C+
Sbjct: 33  EYNIEKSFATHSHVASIRSVSSNKYYLASAGADETVCLYDMRSRRESIKLMHHKDTINCV 92

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            FTP+GSHL +CS DGSI+  R G+WQL+K +  AHKG+AVN  +IHP+GKLALS G+D 
Sbjct: 93  AFTPDGSHLFTCSSDGSISAIRCGNWQLDKHWLTAHKGSAVNIFAIHPTGKLALSTGEDG 152

Query: 121 TLRTWNLVKGRSAYITNL-SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            LRTWNLVKGR AY TNL        + +  + WSP G  Y + I +   V+SVE A + 
Sbjct: 153 VLRTWNLVKGRQAYATNLVPKLKSDAKWITIIKWSPSGEQYLLAINSNIYVYSVESASID 212

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIK 230
           + L  +SKV  V FL +T +  G E   I   +L    H    KA + R+K
Sbjct: 213 RELTFDSKVICVEFLKDTLIAIGFENGEIKFCDLRTSVHTVNTKAHSMRVK 263

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	327
UNIPROTKB|Q9NWT1	392	PAK1IP1 "p21-activated protein	0.758	0.632	0.412	7.7e-48
MGI|MGI:1915333	382	Pak1ip1 "PAK1 interacting prot	0.755	0.646	0.402	1.4e-46
UNIPROTKB|E2RDQ1	394	PAK1IP1 "Uncharacterized prote	0.758	0.629	0.404	1.8e-46
UNIPROTKB|F1NWB8	367	PAK1IP1 "p21-activated protein	0.755	0.673	0.398	3e-46
UNIPROTKB|Q5ZKU8	369	PAK1IP1 "p21-activated protein	0.755	0.669	0.398	3e-46
RGD|1565353	382	Pak1ip1 "PAK1 interacting prot	0.755	0.646	0.399	3.8e-46
ZFIN|ZDB-GENE-030131-8414	368	pak1ip1 "PAK1 interacting prot	0.758	0.673	0.361	1.3e-45
UNIPROTKB|F1MRA9	392	PAK1IP1 "p21-activated protein	0.733	0.612	0.410	2.7e-45
UNIPROTKB|Q5EA99	392	PAK1IP1 "p21-activated protein	0.733	0.612	0.406	5.6e-45
TAIR|locus:2014988	345	AT1G65030 "AT1G65030" [Arabido	0.911	0.863	0.322	1.6e-29

UNIPROTKB|Q9NWT1 PAK1IP1 "p21-activated protein kinase-interacting protein 1" [Homo sapiens (taxid:9606)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 106/257 (41%), Positives = 153/257 (59%)

Query:     1 KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
             ++TL   F  H+HTAS+ +VA  S+   +   DET+ +YDM K+ + GAL+ H GTITCL
Sbjct:    29 QWTLVADFTHHAHTASLSAVAVNSRFVVTGSKDETIHIYDMKKKIEHGALVHHSGTITCL 88

Query:    61 KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
             KF     HLIS ++DG I I+    W+  K  K AHKG  V  +SIHPSGKLALSVG DK
Sbjct:    89 KFYGN-RHLISGAEDGLICIWDAKKWECLKSIK-AHKGQ-VTFLSIHPSGKLALSVGTDK 145

Query:   121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQ 180
             TLRTWNLV+GRSA+I N+       +N   V WSP G  Y + IQNK  ++ ++ A +  
Sbjct:   146 TLRTWNLVEGRSAFIKNIK------QNAHIVEWSPRGEQYVVIIQNKIDIYQLDTASISG 199

Query:   181 TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE 240
             T+ +E ++ SV FL+E+ +    +E  I  ++      L + KA  +R+K +  F IP+ 
Sbjct:   200 TITNEKRISSVKFLSESVLAVAGDEEVIRFFDCDSLVCLCEFKAHENRVKDMFSFEIPEH 259

Query:   241 TTVCTGNEESAITAYNL 257
               + + + +  I  + L
Sbjct:   260 HVIVSASSDGFIKMWKL 276

GO:0009968 "negative regulation of signal transduction" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

MGI|MGI:1915333 Pak1ip1 "PAK1 interacting protein 1" [Mus musculus (taxid:10090)]

 Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
 Identities = 103/256 (40%), Positives = 151/256 (58%)

Query:     2 YTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLK 61
             +T    F  HSHTAS+  +A+ S+   S   DET+ +YDM ++ + GAL+ H GT+TCLK
Sbjct:    30 WTPVADFTHHSHTASLSVLASNSRYVVSGSKDETIHIYDMKRKVEHGALVHHAGTVTCLK 89

Query:    62 FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121
             F     HLIS ++DG I I+ V  W+  K FK AH+G  V  +SIHPSGKLALSVG DKT
Sbjct:    90 FHGN-QHLISGAEDGHICIWDVKRWKCLKTFK-AHRGH-VTFLSIHPSGKLALSVGTDKT 146

Query:   122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQT 181
             LRTWNL++GRSA+I N+       EN   V WSP G  Y + +QNK  V+ +  A V  T
Sbjct:   147 LRTWNLIEGRSAFIKNIK------ENAHIVEWSPSGGKYIVVVQNKVDVYRLGTASVSGT 200

Query:   182 LKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET 241
             + +  ++ SV FL+++ +    +E  +  ++      L + +A  +R+K +V F +P   
Sbjct:   201 ITNGKRISSVTFLSDSVLAVAGDEEVVRIFDCDSLECLCEFRAHENRVKDMVSFEVPDHH 260

Query:   242 TVCTGNEESAITAYNL 257
              + T + +  I  + L
Sbjct:   261 VLVTASNDGFIKMWTL 276

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0009968 "negative regulation of signal transduction" evidence=IEA

UNIPROTKB|E2RDQ1 PAK1IP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 104/257 (40%), Positives = 150/257 (58%)

Query:     1 KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
             K+T    F  H+HTAS+ +VA  S+   +   DET+ +YDM K+   GAL+ H GTITCL
Sbjct:    31 KWTAVADFTHHAHTASLSAVAVNSRFVVTGSKDETIHIYDMKKKIDHGALVHHNGTITCL 90

Query:    61 KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
             KF     HLIS ++DG I ++    W+  K  K AHKG  V  +SIHPSGKLALSVG DK
Sbjct:    91 KFYGN-RHLISGAEDGLICVWDAKKWECLKSIK-AHKGH-VTFLSIHPSGKLALSVGTDK 147

Query:   121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQ 180
             TLRTWNLV+GRSA+I N+       +N   V WSP G  Y + I NK  V+ ++ A V  
Sbjct:   148 TLRTWNLVEGRSAFIKNIK------QNAHIVEWSPRGERYIVVILNKINVYQLDTASVSG 201

Query:   181 TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE 240
             T+ +E ++ SV FL+E+ +    +E  +  ++    + + + KA  +R+K +  F  P+ 
Sbjct:   202 TITNEKRISSVTFLSESVLAVAGDEEVVRFFDCDSLTCVCEFKAHENRVKDIFSFEDPEH 261

Query:   241 TTVCTGNEESAITAYNL 257
               + T + +  I  + L
Sbjct:   262 HIIVTASSDGFIKMWKL 278

GO:0005886 "plasma membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1NWB8 PAK1IP1 "p21-activated protein kinase-interacting protein 1-like" [Gallus gallus (taxid:9031)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 102/256 (39%), Positives = 151/256 (58%)

Query:     2 YTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLK 61
             +T+T  F  H+HTAS+ +VA  SK   +   DE++ +YDM K+ + GAL+QH GTITCL+
Sbjct:    21 WTVTPDFTHHAHTASLSAVAVNSKYVVTGSRDESIQIYDMRKKVEHGALLQHNGTITCLE 80

Query:    62 FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121
             F    +HL+S ++DG I I+    W+  K  K AHKG  V  +SIHPSGKLALSVG DKT
Sbjct:    81 FYGT-AHLLSGAEDGLICIWNTKRWECLKSIK-AHKGH-VTSLSIHPSGKLALSVGTDKT 137

Query:   122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQT 181
             LRTWNLV+GRSA+I NL       +N   + WSP+G  Y   I NK  ++ ++ A +  T
Sbjct:   138 LRTWNLVEGRSAFIKNLK------QNAHIIKWSPDGEKYVTVITNKVDIYKLDTASITGT 191

Query:   182 LKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET 241
             +  E ++ S+ F+ ++ +    ++  I  Y+      L + KA  +RIK +  F    + 
Sbjct:   192 ITIEKRISSIRFITDSVLAIAGDDEIIRFYSCDSQKCLCEFKAHENRIKDIYSFEREGQH 251

Query:   242 TVCTGNEESAITAYNL 257
              + T + +  I  +NL
Sbjct:   252 VIVTASSDGYIKVWNL 267

GO:0005634 "nucleus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|Q5ZKU8 PAK1IP1 "p21-activated protein kinase-interacting protein 1-like" [Gallus gallus (taxid:9031)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 102/256 (39%), Positives = 151/256 (58%)

Query:     2 YTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLK 61
             +T+T  F  H+HTAS+ +VA  SK   +   DE++ +YDM K+ + GAL+QH GTITCL+
Sbjct:    23 WTVTPDFTHHAHTASLSAVAVNSKYVVTGSRDESIQIYDMRKKVEHGALLQHNGTITCLE 82

Query:    62 FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121
             F    +HL+S ++DG I I+    W+  K  K AHKG  V  +SIHPSGKLALSVG DKT
Sbjct:    83 FYGT-AHLLSGAEDGLICIWNTKRWECLKSIK-AHKGH-VTSLSIHPSGKLALSVGTDKT 139

Query:   122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQT 181
             LRTWNLV+GRSA+I NL       +N   + WSP+G  Y   I NK  ++ ++ A +  T
Sbjct:   140 LRTWNLVEGRSAFIKNLK------QNAHIIKWSPDGEKYVTVITNKVDIYKLDTASITGT 193

Query:   182 LKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET 241
             +  E ++ S+ F+ ++ +    ++  I  Y+      L + KA  +RIK +  F    + 
Sbjct:   194 ITIEKRISSIRFITDSVLAIAGDDEIIRFYSCDSQKCLCEFKARENRIKDIYSFEREGQH 253

Query:   242 TVCTGNEESAITAYNL 257
              + T + +  I  +NL
Sbjct:   254 VIVTASSDGYIKVWNL 269

GO:0009968 "negative regulation of signal transduction" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

RGD|1565353 Pak1ip1 "PAK1 interacting protein 1" [Rattus norvegicus (taxid:10116)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 103/258 (39%), Positives = 153/258 (59%)

Query:     2 YTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLK 61
             +T    F  H+HTAS+ +VAA ++   +   DET+ +YDM K+ + GAL+ H GT+TCLK
Sbjct:    30 WTPVADFTHHAHTASLSAVAANNRYVVTGSKDETIHIYDMKKKVEHGALVHHSGTVTCLK 89

Query:    62 FTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
             F   GS HLIS ++DG I ++    W+  K  K AH+G  V  +SIHPSGKLALSVG DK
Sbjct:    90 FY--GSRHLISGAEDGLICVWDAKKWECLKSIK-AHRGH-VTFLSIHPSGKLALSVGTDK 145

Query:   121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQ 180
             TLRTWNLV+GRSA+I N+       +N   V WSP G  Y + + NK  V+ ++ A V  
Sbjct:   146 TLRTWNLVEGRSAFIKNIK------QNAHIVEWSPNGEKYVVVVMNKVDVYHLDTASVSG 199

Query:   181 TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE 240
             TL +  ++ ++ FL+++ +    +E  +  ++      L + KA  +R+K +V F IP  
Sbjct:   200 TLTNGKRISAITFLSDSVLAVAGDEEVVRFFDCDTLVCLCEFKAHENRVKDMVSFEIPDH 259

Query:   241 TTVCTGNEESAITAYNLT 258
               + T + +  I  + LT
Sbjct:   260 HVLVTASNDGFIKMWTLT 277

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

ZFIN|ZDB-GENE-030131-8414 pak1ip1 "PAK1 interacting protein 1" [Danio rerio (taxid:7955)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 93/257 (36%), Positives = 158/257 (61%)

Query:     1 KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
             ++T+  TF  H+HTAS+ +V+++++  A+   DET+ LYDM K+ + GAL+ H+GTI+CL
Sbjct:    34 EWTIEPTFTHHAHTASLNAVSSSNQFIATGSKDETIQLYDMCKKTEHGALLHHDGTISCL 93

Query:    61 KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
             +F    SHL+S   DG I ++    W+  K  + AHKG  V  +S+HPSGKLALSVG DK
Sbjct:    94 EFYGT-SHLLSGGQDGLICVWSTKKWECLKTIR-AHKGQ-VTSLSVHPSGKLALSVGTDK 150

Query:   121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQ 180
             TLRTWNL++GRSA+I N+       +N + V+WSP+G  YA+ + +K  +++++ A ++ 
Sbjct:   151 TLRTWNLIEGRSAFIKNIK------QNAEIVLWSPDGDKYAVVVNDKVDIYTLDSATIIG 204

Query:   181 TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE 240
             T+    ++  + FL  + +  G ++ ++  Y++T    + + KA  +R+K +  F     
Sbjct:   205 TIAFTKRISCLKFLKNSLLAVGGDDESVRIYDVTSQKCVCEFKAHENRVKAIESFMKDDF 264

Query:   241 TTVCTGNEESAITAYNL 257
               + T + +  I  + L
Sbjct:   265 CVLVTASNDGFIKLWKL 281

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0009968 "negative regulation of signal transduction" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|F1MRA9 PAK1IP1 "p21-activated protein kinase-interacting protein 1" [Bos taurus (taxid:9913)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 103/251 (41%), Positives = 150/251 (59%)

Query:     8 FVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS 67
             F  H+HTAS+ +VA  S+   +   DET+ +YDM K+   GALM H GTITCLKF   G+
Sbjct:    36 FTHHAHTASLSAVAVNSRFVVTGSKDETIHIYDMKKKVDHGALMHHNGTITCLKF--HGN 93

Query:    68 -HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126
              HLIS ++DG I ++    W+  K  + AHKG  V  +SIHPSGKLALSVG DKTLRTWN
Sbjct:    94 RHLISGAEDGLICVWDARRWECLKSIR-AHKGH-VTFLSIHPSGKLALSVGTDKTLRTWN 151

Query:   127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSES 186
             LV+GRSA+I N+       ++   V WSP+G  Y + I N+  V+ ++ A V  T+ +E 
Sbjct:   152 LVEGRSAFIKNIK------QSAHIVEWSPKGEKYVVVILNRIDVYQLDTASVSGTITNER 205

Query:   187 KVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG 246
             +V SV FL+E+ +    +E  +  ++    + L + KA  +R+K +  F  P+   + T 
Sbjct:   206 RVSSVTFLSESVLTVAGDEEVVRFFDCDSLTCLSEFKAHENRVKDMFSFETPEHHVLVTA 265

Query:   247 NEESAITAYNL 257
             + +  I  + L
Sbjct:   266 SSDGFIKMWKL 276

GO:0005886 "plasma membrane" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q5EA99 PAK1IP1 "p21-activated protein kinase-interacting protein 1" [Bos taurus (taxid:9913)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 102/251 (40%), Positives = 150/251 (59%)

Query:     8 FVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS 67
             F  H+HTAS+ +VA  S+   +   DET+ +YDM K+   GALM H GTITCLKF   G+
Sbjct:    36 FTHHAHTASLSAVAVNSRFVVTGSKDETIHIYDMKKKVDHGALMHHNGTITCLKF--HGN 93

Query:    68 -HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126
              HLIS ++DG I ++    W+  K  + AHKG  V  +SIHPSG+LALSVG DKTLRTWN
Sbjct:    94 RHLISGAEDGLICVWDARRWECLKSIR-AHKGH-VTFLSIHPSGRLALSVGTDKTLRTWN 151

Query:   127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSES 186
             LV+GRSA+I N+       ++   V WSP+G  Y + I N+  V+ ++ A V  T+ +E 
Sbjct:   152 LVEGRSAFIKNIK------QSAHIVEWSPKGEKYVVVILNRIDVYQLDTASVSGTITNER 205

Query:   187 KVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG 246
             +V SV FL+E+ +    +E  +  ++    + L + KA  +R+K +  F  P+   + T 
Sbjct:   206 RVSSVTFLSESVLTVAGDEEVVRFFDCDSLTCLSEFKAHENRVKDMFSFETPEHHVLVTA 265

Query:   247 NEESAITAYNL 257
             + +  I  + L
Sbjct:   266 SSDGFIKMWKL 276

GO:0005730 "nucleolus" evidence=IEA

GO:0009968 "negative regulation of signal transduction" evidence=IEA

TAIR|locus:2014988 AT1G65030 "AT1G65030" [Arabidopsis thaliana (taxid:3702)]

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 105/326 (32%), Positives = 168/326 (51%)

Query:     3 TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHE--GTITCL 60
             TL+  F   SH + + +VA +   AAS G+D+T+ LYD+      G+L+ H    +IT L
Sbjct:    30 TLSPLFSYPSHISPITTVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITAL 89

Query:    61 KF-TPEG----SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALS 115
              F TP       +LIS + DGS+AIF    + L K F+  HK  AVN ++IHPSGKLAL+
Sbjct:    90 SFYTPSSLSFPRNLISAAADGSVAIFDTDPFVLLKSFRP-HK-KAVNDLAIHPSGKLALA 147

Query:   116 VGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEK 175
             V +D+     NLV+G+ ++   L     G E    V + P G  + + + NK  V   E 
Sbjct:   148 VYRDEFFAMLNLVRGKRSFCCRL-----GHE-ASLVKFDPSGERFYMVVSNKVGVHQSED 201

Query:   176 AGVLQTLKSESKVHSVCFL-NET-TVCTGNEESAITAYNLTDGSHLWQIK-ASASRIKGL 232
             A +L  L++ S+   +C    E+ T+ TG E+ AITA++   G   + I+ A  +RIKG+
Sbjct:   202 AKLLLELENPSRKRILCATPGESGTLFTGGEDRAITAWDTNSGKLAYSIEDAHPARIKGI 261

Query:   233 VFFSIPQETTVCTGN-EESAITAYNLTDGS-HLWHIKASASR-IKGLA--SHRNHLICIT 287
             V  +         G+ E+  +     +DG   +W ++ +A    K LA  + ++ L C+ 
Sbjct:   262 VVLTRNDSD----GSLEDPYLIGSASSDGIIRVWDVRMAAKENTKPLAETNTKSRLTCLA 317

Query:   288 SAGDLVVWELNEDVTREPQRVSATND 313
              +  L      +   +EPQ+V   ++
Sbjct:   318 GSA-LKSMRRPQIGKQEPQKVDEEHE 342

GO:0000166 "nucleotide binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005834 "heterotrimeric G-protein complex" evidence=ISS

GO:0005730 "nucleolus" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9DCE5	PK1IP_MOUSE	No assigned EC number	0.4023	0.7553	0.6465	yes	N/A
Q6TNS2	PK1IP_DANRE	No assigned EC number	0.3169	0.8440	0.75	yes	N/A
Q5ZKU8	PK1IP_CHICK	No assigned EC number	0.3984	0.7553	0.6693	yes	N/A
Q9NWT1	PK1IP_HUMAN	No assigned EC number	0.3695	0.8348	0.6964	yes	N/A
Q5EA99	PK1IP_BOVIN	No assigned EC number	0.3523	0.8134	0.6785	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	327
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-20
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-20
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-20
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	6e-19
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-14
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-13
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-10
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	8e-09
smart00320	40	smart00320, WD40, WD40 repeats	2e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	6e-05

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 90.1 bits (224), Expect = 1e-20
 Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 14/198 (7%)

Query: 11  HSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH 68
             HT+ V SVA     ++ +SS  D+T+ ++D+   K    L  H   +  + F+P+G+ 
Sbjct: 90  TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTF 149

Query: 69  LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128
           + S S DG+I ++ + + +        H G  VN ++  P G+  LS   D T++ W+L 
Sbjct: 150 VASSSQDGTIKLWDLRTGKCVATL-TGHTG-EVNSVAFSPDGEKLLSSSSDGTIKLWDLS 207

Query: 129 KGRSAYITNLSSYGVGFEN-LDSVVWSPEG-LLYAIPIQNKAVVFSVEKAGVLQTLKS-E 185
            G+            G EN ++SV +SP+G LL +        V+ +     +QTL    
Sbjct: 208 TGKCLGT------LRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHT 261

Query: 186 SKVHSVCFLNE-TTVCTG 202
           + V S+ +  +   + +G
Sbjct: 262 NSVTSLAWSPDGKRLASG 279

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 89.7 bits (223), Expect = 1e-20
 Identities = 58/240 (24%), Positives = 110/240 (45%), Gaps = 16/240 (6%)

Query: 13  HTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           HT  VR VA  A     AS  +D+T+ L+D+   +    L  H   ++ + F+P+G  L 
Sbjct: 50  HTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILS 109

Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
           S S D +I ++ V + +      + H    VN ++  P G    S  +D T++ W+L  G
Sbjct: 110 SSSRDKTIKVWDVETGKCLTTL-RGHTDW-VNSVAFSPDGTFVASSSQDGTIKLWDLRTG 167

Query: 131 RSAYITNLSSYGVGFEN-LDSVVWSPEGLLYAIPIQNKAV-VFSVEKAGVLQTLKS-ESK 187
           +   +  L+    G    ++SV +SP+G        +  + ++ +     L TL+  E+ 
Sbjct: 168 KC--VATLT----GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG 221

Query: 188 VHSVCFL-NETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG 246
           V+SV F  +   + +G+E+  I  ++L  G  +  +    + +  L +   P    + +G
Sbjct: 222 VNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWS--PDGKRLASG 279

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 88.5 bits (220), Expect = 3e-20
 Identities = 58/285 (20%), Positives = 126/285 (44%), Gaps = 14/285 (4%)

Query: 12  SHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL 69
            HT  V  VA     KL A+   D T+ ++D+   +    L  H G +  +  + +G++L
Sbjct: 7   GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYL 66

Query: 70  ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129
            S S D +I ++ + + +  +     H    V+ ++  P G++  S  +DKT++ W++  
Sbjct: 67  ASGSSDKTIRLWDLETGECVRTL-TGHTS-YVSSVAFSPDGRILSSSSRDKTIKVWDVET 124

Query: 130 GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAV-VFSVEKAGVLQTLKS-ESK 187
           G+        +  V     +SV +SP+G   A   Q+  + ++ +     + TL     +
Sbjct: 125 GKCLTTLRGHTDWV-----NSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGE 179

Query: 188 VHSVCFL-NETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG 246
           V+SV F  +   + + + +  I  ++L+ G  L  ++   + +  + F   P    + +G
Sbjct: 180 VNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFS--PDGYLLASG 237

Query: 247 NEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGD 291
           +E+  I  ++L  G  +  +    + +  LA   +     + + D
Sbjct: 238 SEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSAD 282

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 85.1 bits (211), Expect = 6e-19
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 9/157 (5%)

Query: 3   TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           T         HT  V SVA        ASS  D T+ L+D+   K    L  H G +  +
Sbjct: 124 TGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSV 183

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
            F+P+G  L+S S DG+I ++ + + +      + H+   VN ++  P G L  S  +D 
Sbjct: 184 AFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTL-RGHEN-GVNSVAFSPDGYLLASGSEDG 241

Query: 121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG 157
           T+R W+L  G      +  +  V      S+ WSP+G
Sbjct: 242 TIRVWDLRTGECVQTLSGHTNSVT-----SLAWSPDG 273

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 73.6 bits (179), Expect = 1e-14
 Identities = 77/298 (25%), Positives = 134/298 (44%), Gaps = 21/298 (7%)

Query: 13  HTASVRSVAATSK---LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL 69
           H+ SV S+A +     LA+ S  D T+ L+D+   K    L  H   ++ L F+P+G  L
Sbjct: 154 HSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLL 213

Query: 70  I-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128
           I S S DG+I ++ + + +L +     H  + V+  S  P G L  S   D T+R W+L 
Sbjct: 214 IASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVS--SFSPDGSLLASGSSDGTIRLWDLR 271

Query: 129 KGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYAIPIQNKAVVFSVEKAGVLQTLK---S 184
              S   T          ++ SV +SP+G LL +        ++ +E   +L +L     
Sbjct: 272 SSSSLLRTLSGHS----SSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGH 327

Query: 185 ESKVHSVCFL--NETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT 242
           E  V S+ F       V  G+++  I  ++L  G  L  ++   S +  + F   P    
Sbjct: 328 EGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNVLSVSFS--PDGRV 384

Query: 243 VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRN--HLICITSAGDLVVWELN 298
           V +G+ +  +  ++L+ GS L ++    SR+  L    +   L   +S   + +W+L 
Sbjct: 385 VSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLK 442

Length = 466

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 4   LTQTFVTHSHTASVRSVAATSKLA--ASSGADETVVLYDMVKRKQSGALMQHEGTITCLK 61
              T     HT  V SVA +       SS +D T+ L+D+   K  G L  HE  +  + 
Sbjct: 169 CVATL--TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVA 226

Query: 62  FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121
           F+P+G  L S S+DG+I ++ + + +  +     H   +V  ++  P GK   S   D T
Sbjct: 227 FSPDGYLLASGSEDGTIRVWDLRTGECVQTLS-GHTN-SVTSLAWSPDGKRLASGSADGT 284

Query: 122 LRTWN 126
           +R W+
Sbjct: 285 IRIWD 289

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 61.6 bits (148), Expect = 1e-10
 Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 12/223 (5%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDM-VKRKQSGALMQHEGTITC 59
              L  T   HS  + V S +    L AS  +D T+ L+D+         L  H  ++  
Sbjct: 231 GKLLRSTLSGHS-DSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLS 289

Query: 60  LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGK 118
           + F+P+G  L S S DG++ ++ + + +L            V+ +S  P G  L      
Sbjct: 290 VAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSD 349

Query: 119 DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI-PIQNKAVVFSVEKAG 177
           D T+R W+L  G+        S      N+ SV +SP+G + +         ++ +    
Sbjct: 350 DGTIRLWDLRTGKPLKTLEGHS------NVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGS 403

Query: 178 VLQTLKS-ESKVHSVCFLNET-TVCTGNEESAITAYNLTDGSH 218
           +L+ L    S+V S+ F  +  ++ +G+ ++ I  ++L     
Sbjct: 404 LLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLK 446

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 56.3 bits (134), Expect = 8e-09
 Identities = 60/294 (20%), Positives = 117/294 (39%), Gaps = 19/294 (6%)

Query: 42  VKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV-GSWQLEKLFKKAHKGTA 100
           +    S  L  HE +IT + F+P+G  L+S S DG+I ++ +    +L K  +  H  + 
Sbjct: 53  LPDLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSV 112

Query: 101 VNHISIHPSGK--LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL 158
                  P G   L  S   D T++ W+L        T         E++ S+ +SP+G 
Sbjct: 113 SKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHS----ESVTSLAFSPDGK 168

Query: 159 LYAIPIQ--NKAVVFSVEKAGVLQTLK-SESKVHSVCF--LNETTVCTGNEESAITAYNL 213
           L A          ++ +     L TL      V S+ F       + +G+ +  I  ++L
Sbjct: 169 LLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDL 228

Query: 214 TDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL-TDGSHLWHIKASASR 272
           + G  L    +  S      F   P  + + +G+ +  I  ++L +  S L  +   +S 
Sbjct: 229 STGKLLRSTLSGHSDSVVSSFS--PDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSS 286

Query: 273 IKGLASHRNHLICITSAGD--LVVWELNEDVTREPQRVSATNDGCRFTCLAIRP 324
           +  +A   +  +  + + D  + +W+L     +    ++        + L+  P
Sbjct: 287 VLSVAFSPDGKLLASGSSDGTVRLWDLETG--KLLSSLTLKGHEGPVSSLSFSP 338

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 40.8 bits (96), Expect = 2e-05
 Identities = 14/32 (43%), Positives = 22/32 (68%)

Query: 50 LMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81
          L  H G +T + F+P+G +L S SDDG+I ++
Sbjct: 8  LKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 39.3 bits (92), Expect = 6e-05
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 44 RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81
           K    L  H G +T + F+P+G+ L S SDDG++ ++
Sbjct: 1  GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	327
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0271|consensus	480		100.0
KOG0286|consensus	343		100.0
KOG0315|consensus	311		100.0
KOG0279|consensus	315		100.0
KOG0272|consensus	459		100.0
KOG0295|consensus	406		100.0
KOG0286|consensus	343		100.0
KOG0284|consensus	464		100.0
KOG0285|consensus	460		100.0
KOG0293|consensus	519		100.0
KOG0273|consensus	524		100.0
KOG0281|consensus	499		100.0
KOG0282|consensus	503		100.0
KOG0318|consensus	603		100.0
KOG0316|consensus	307		100.0
KOG0279|consensus	315		100.0
KOG0318|consensus	603		100.0
KOG0265|consensus	338		100.0
KOG0273|consensus	524		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0266|consensus	456		100.0
KOG0296|consensus	399		100.0
KOG0645|consensus	312		100.0
KOG0284|consensus	464		100.0
KOG0294|consensus	362		100.0
KOG0315|consensus	311		100.0
KOG0291|consensus	893		100.0
KOG0319|consensus	775		100.0
KOG0319|consensus	775		100.0
KOG0291|consensus	893		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0263|consensus	707		100.0
KOG0263|consensus	707		100.0
KOG0295|consensus	406		100.0
KOG0313|consensus	423		100.0
KOG0265|consensus	338		100.0
KOG0278|consensus	334		100.0
KOG0276|consensus	794		100.0
KOG0643|consensus	327		100.0
KOG0306|consensus	888		100.0
KOG1407|consensus	313		100.0
KOG0316|consensus	307		100.0
KOG0285|consensus	460		100.0
KOG0645|consensus	312		100.0
KOG0292|consensus	1202		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0275|consensus	508		100.0
KOG0276|consensus	794		100.0
KOG1446|consensus	311		100.0
KOG0296|consensus	399		100.0
KOG0283|consensus	712		100.0
KOG0278|consensus	334		100.0
KOG1407|consensus	313		100.0
KOG0266|consensus	456		100.0
KOG0281|consensus	499		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0274|consensus	537		100.0
KOG0288|consensus	459		100.0
KOG0640|consensus	430		100.0
KOG0306|consensus	888		100.0
KOG0268|consensus	433		100.0
KOG0282|consensus	503		100.0
KOG0294|consensus	362		100.0
KOG0277|consensus	311		100.0
KOG0643|consensus	327		100.0
KOG0772|consensus	641		100.0
KOG0293|consensus	519		100.0
KOG0305|consensus	484		100.0
PTZ00420	568	coronin; Provisional	100.0
KOG0289|consensus	506		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0292|consensus	1202		100.0
KOG0313|consensus	423		100.0
KOG0283|consensus	712		100.0
KOG0301|consensus	745		100.0
KOG0277|consensus	311		100.0
KOG0300|consensus	481		100.0
KOG0310|consensus	487		100.0
KOG0310|consensus	487		100.0
KOG0647|consensus	347		100.0
PTZ00420	568	coronin; Provisional	100.0
KOG0305|consensus	484		100.0
KOG0308|consensus	735		100.0
KOG0973|consensus	942		100.0
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	100.0
KOG0274|consensus	537		100.0
KOG1446|consensus	311		100.0
KOG0647|consensus	347		100.0
KOG0641|consensus	350		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0299|consensus	479		100.0
KOG1036|consensus	323		100.0
KOG1063|consensus	764		100.0
KOG0299|consensus	479		100.0
KOG0640|consensus	430		100.0
KOG0275|consensus	508		100.0
KOG0300|consensus	481		100.0
KOG0288|consensus	459		100.0
KOG0641|consensus	350		100.0
KOG1539|consensus	910		99.98
KOG0264|consensus	422		99.98
KOG1408|consensus	1080		99.97
KOG0264|consensus	422		99.97
KOG0973|consensus	942		99.97
KOG0289|consensus	506		99.97
KOG0308|consensus	735		99.97
KOG2055|consensus	514		99.97
KOG0639|consensus	705		99.97
KOG0268|consensus	433		99.97
KOG1036|consensus	323		99.97
KOG0650|consensus	733		99.97
KOG1273|consensus	405		99.97
KOG0646|consensus	476		99.97
KOG2048|consensus	691		99.97
KOG2106|consensus	626		99.97
KOG2096|consensus	420		99.97
KOG0772|consensus	641		99.97
KOG1332|consensus	299		99.97
KOG2106|consensus	626		99.97
KOG0646|consensus	476		99.97
KOG1539|consensus	910		99.97
KOG2445|consensus	361		99.97
KOG0321|consensus	720		99.97
KOG1274|consensus	933		99.97
KOG0269|consensus	839		99.96
KOG4283|consensus	397		99.96
KOG1332|consensus	299		99.96
KOG0269|consensus	839		99.96
KOG2055|consensus	514		99.96
KOG2048|consensus	691		99.96
KOG2445|consensus	361		99.96
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.96
KOG0267|consensus	825		99.96
KOG4283|consensus	397		99.96
KOG1274|consensus	933		99.96
KOG1007|consensus	370		99.95
KOG0301|consensus	745		99.95
KOG2919|consensus	406		99.95
KOG1408|consensus	1080		99.95
KOG1273|consensus	405		99.95
KOG1445|consensus	1012		99.95
KOG4378|consensus	673		99.95
KOG2096|consensus	420		99.95
KOG0270|consensus	463		99.95
KOG4328|consensus	498		99.95
KOG1538|consensus	1081		99.95
KOG0302|consensus	440		99.95
KOG0267|consensus	825		99.95
KOG1063|consensus	764		99.95
KOG0639|consensus	705		99.95
KOG0302|consensus	440		99.94
KOG0322|consensus	323		99.94
KOG0270|consensus	463		99.94
KOG4378|consensus	673		99.94
KOG0321|consensus	720		99.94
KOG1034|consensus	385		99.94
KOG0307|consensus	1049		99.94
KOG0650|consensus	733		99.93
KOG1188|consensus	376		99.93
KOG2919|consensus	406		99.93
KOG1034|consensus	385		99.93
KOG0642|consensus	577		99.93
KOG0307|consensus	1049		99.93
KOG4328|consensus	498		99.92
KOG1009|consensus	434		99.92
KOG4227|consensus	609		99.92
COG2319	466	FOG: WD40 repeat [General function prediction only	99.92
PRK11028	330	6-phosphogluconolactonase; Provisional	99.91
KOG0290|consensus	364		99.91
KOG0644|consensus	1113		99.91
KOG1334|consensus	559		99.91
KOG0303|consensus	472		99.9
KOG0649|consensus	325		99.9
KOG1587|consensus	555		99.89
COG2319	466	FOG: WD40 repeat [General function prediction only	99.89
KOG2110|consensus	391		99.89
KOG0649|consensus	325		99.89
KOG0771|consensus	398		99.88
KOG1517|consensus	1387		99.88
KOG1240|consensus	1431		99.88
KOG2110|consensus	391		99.88
KOG1538|consensus	1081		99.88
KOG1007|consensus	370		99.88
KOG1009|consensus	434		99.88
KOG1272|consensus	545		99.87
KOG0290|consensus	364		99.87
KOG1963|consensus	792		99.87
KOG1310|consensus	758		99.87
KOG1963|consensus	792		99.87
KOG1523|consensus	361		99.87
KOG1524|consensus	737		99.86
KOG1587|consensus	555		99.86
PRK01742	429	tolB translocation protein TolB; Provisional	99.86
KOG0642|consensus	577		99.86
KOG4227|consensus	609		99.86
KOG1188|consensus	376		99.85
KOG0303|consensus	472		99.85
KOG1517|consensus	1387		99.84
KOG2111|consensus	346		99.83
KOG0771|consensus	398		99.83
PRK01742	429	tolB translocation protein TolB; Provisional	99.83
KOG1523|consensus	361		99.82
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.82
KOG0644|consensus	1113		99.82
KOG4497|consensus	447		99.82
PRK03629	429	tolB translocation protein TolB; Provisional	99.81
KOG1445|consensus	1012		99.81
KOG1240|consensus	1431		99.81
PRK11028	330	6-phosphogluconolactonase; Provisional	99.8
KOG1524|consensus	737		99.8
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.8
KOG0322|consensus	323		99.79
KOG1272|consensus	545		99.79
KOG3881|consensus	412		99.79
KOG2111|consensus	346		99.78
PRK04922	433	tolB translocation protein TolB; Provisional	99.78
PRK05137	435	tolB translocation protein TolB; Provisional	99.78
KOG2139|consensus	445		99.78
KOG1334|consensus	559		99.78
KOG2394|consensus	636		99.78
KOG2139|consensus	445		99.78
PRK02889	427	tolB translocation protein TolB; Provisional	99.77
KOG1310|consensus	758		99.76
KOG2321|consensus	703		99.75
PRK03629	429	tolB translocation protein TolB; Provisional	99.74
KOG1409|consensus	404		99.74
KOG2321|consensus	703		99.74
KOG2394|consensus	636		99.73
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.72
KOG4497|consensus	447		99.71
KOG4190|consensus	1034		99.71
PRK04922	433	tolB translocation protein TolB; Provisional	99.7
PRK05137	435	tolB translocation protein TolB; Provisional	99.69
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.68
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.68
PRK02889	427	tolB translocation protein TolB; Provisional	99.68
PRK00178	430	tolB translocation protein TolB; Provisional	99.67
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.67
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.67
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.66
PRK04792	448	tolB translocation protein TolB; Provisional	99.66
KOG1409|consensus	404		99.66
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.66
KOG2041|consensus	1189		99.66
KOG1354|consensus	433		99.65
KOG1354|consensus	433		99.65
KOG3881|consensus	412		99.64
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.64
KOG4547|consensus	541		99.63
KOG0974|consensus	967		99.62
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.62
KOG2315|consensus	566		99.6
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.59
KOG4190|consensus	1034		99.58
KOG0974|consensus	967		99.58
PRK04792	448	tolB translocation protein TolB; Provisional	99.57
PRK00178	430	tolB translocation protein TolB; Provisional	99.57
KOG0280|consensus	339		99.55
KOG1064|consensus	2439		99.54
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.54
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.53
KOG1912|consensus	1062		99.53
PRK01029	428	tolB translocation protein TolB; Provisional	99.53
KOG0280|consensus	339		99.51
KOG4547|consensus	541		99.51
PRK01029	428	tolB translocation protein TolB; Provisional	99.49
KOG2314|consensus	698		99.48
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.48
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.44
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.43
KOG1912|consensus	1062		99.42
KOG1064|consensus	2439		99.42
KOG2314|consensus	698		99.42
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.42
KOG2041|consensus	1189		99.42
KOG0309|consensus	1081		99.42
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.4
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.39
PRK04043	419	tolB translocation protein TolB; Provisional	99.37
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.37
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.37
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.37
KOG2315|consensus	566		99.36
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.35
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.33
KOG4532|consensus	344		99.33
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.33
COG4946	668	Uncharacterized protein related to the periplasmic	99.32
KOG3914|consensus	390		99.31
KOG3914|consensus	390		99.31
COG4946	668	Uncharacterized protein related to the periplasmic	99.31
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.3
KOG4714|consensus	319		99.29
KOG4532|consensus	344		99.27
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.27
KOG2695|consensus	425		99.25
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	99.24
KOG2066|consensus	846		99.22
KOG4649|consensus	354		99.22
KOG4649|consensus	354		99.2
PRK04043	419	tolB translocation protein TolB; Provisional	99.17
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	99.16
KOG1645|consensus	463		99.14
KOG0882|consensus	558		99.13
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	99.11
KOG2695|consensus	425		99.1
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.1
KOG1832|consensus	1516		99.1
KOG4714|consensus	319		99.09
KOG0309|consensus	1081		99.06
KOG1275|consensus	1118		99.02
KOG2114|consensus	933		99.02
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	99.01
KOG1832|consensus	1516		98.98
KOG1920|consensus	1265		98.96
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.96
KOG1920|consensus	1265		98.95
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.95
KOG0882|consensus	558		98.9
KOG2066|consensus	846		98.9
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.9
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	98.88
KOG3621|consensus	726		98.86
KOG2114|consensus	933		98.86
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.85
KOG1275|consensus	1118		98.82
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.82
KOG1645|consensus	463		98.81
PRK02888	635	nitrous-oxide reductase; Validated	98.81
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.81
PRK02888	635	nitrous-oxide reductase; Validated	98.79
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.79
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.78
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.77
KOG1008|consensus	783		98.76
KOG1008|consensus	783		98.75
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.75
KOG3617|consensus	1416		98.73
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.7
KOG3621|consensus	726		98.68
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.66
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.64
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.62
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.59
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.53
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.46
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.45
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.44
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.43
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.38
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.36
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.31
COG3391	381	Uncharacterized conserved protein [Function unknow	98.31
KOG1897|consensus	1096		98.29
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	98.28
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	98.27
PRK13616	591	lipoprotein LpqB; Provisional	98.25
KOG4640|consensus	665		98.21
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.18
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	98.18
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.18
KOG3617|consensus	1416		98.18
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.15
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.13
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.12
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	98.1
KOG4640|consensus	665		98.1
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	98.09
PHA02713	557	hypothetical protein; Provisional	98.06
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.05
KOG4499|consensus	310		98.01
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.0
KOG4441|consensus	571		97.98
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.96
PHA02713	557	hypothetical protein; Provisional	97.96
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.95
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.91
KOG4441|consensus	571		97.9
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.84
KOG2395|consensus	644		97.84
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.83
PRK13616	591	lipoprotein LpqB; Provisional	97.8
COG3391	381	Uncharacterized conserved protein [Function unknow	97.8
KOG2079|consensus	1206		97.77
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	97.75
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.74
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.73
KOG2395|consensus	644		97.71
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.67
KOG2079|consensus	1206		97.6
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.59
COG1520	370	FOG: WD40-like repeat [Function unknown]	97.59
KOG2444|consensus	238		97.52
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.5
KOG2444|consensus	238		97.5
PHA03098	534	kelch-like protein; Provisional	97.48
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.46
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.41
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.4
KOG4499|consensus	310		97.36
PHA02790	480	Kelch-like protein; Provisional	97.33
PRK13684	334	Ycf48-like protein; Provisional	97.29
PHA03098	534	kelch-like protein; Provisional	97.24
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	97.24
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	97.17
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.15
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	97.14
PF14727	418	PHTB1_N: PTHB1 N-terminus	97.13
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	97.07
PRK10115	686	protease 2; Provisional	97.05
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	97.04
COG1520	370	FOG: WD40-like repeat [Function unknown]	96.95
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.9
COG5276	370	Uncharacterized conserved protein [Function unknow	96.8
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	96.77
PRK13684	334	Ycf48-like protein; Provisional	96.77
COG3292	671	Predicted periplasmic ligand-binding sensor domain	96.72
PHA02790	480	Kelch-like protein; Provisional	96.72
KOG1897|consensus	1096		96.66
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.54
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.49
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	96.44
COG5167	776	VID27 Protein involved in vacuole import and degra	96.42
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.24
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.21
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.21
PF14727	418	PHTB1_N: PTHB1 N-terminus	96.2
PF10214	765	Rrn6: RNA polymerase I-specific transcription-init	96.09
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.04
PLN00033	398	photosystem II stability/assembly factor; Provisio	96.03
PRK10115	686	protease 2; Provisional	96.0
KOG3630|consensus	1405		95.9
KOG3630|consensus	1405		95.87
KOG2280|consensus	829		95.84
KOG2280|consensus	829		95.83
KOG1916|consensus	1283		95.82
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.6
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.43
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	95.4
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	95.35
COG5167	776	VID27 Protein involved in vacuole import and degra	95.25
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	95.23
KOG2247|consensus	615		95.23
KOG1916|consensus	1283		95.2
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	94.95
KOG2247|consensus	615		94.92
KOG2377|consensus	657		94.86
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.84
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	94.84
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	94.8
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	94.63
KOG2377|consensus	657		94.53
KOG1900|consensus	1311		94.48
KOG1898|consensus	1205		94.46
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	94.39
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	94.37
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	94.33
PF12768	281	Rax2: Cortical protein marker for cell polarity	94.31
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	94.07
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	94.04
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	94.03
COG4590	733	ABC-type uncharacterized transport system, permeas	94.0
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	93.98
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	93.8
TIGR03032	335	conserved hypothetical protein TIGR03032. This pro	93.63
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	93.01
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	92.99
PLN02193	470	nitrile-specifier protein	92.89
PLN02153	341	epithiospecifier protein	92.88
KOG3616|consensus	1636		92.79
COG4257	353	Vgb Streptogramin lyase [Defense mechanisms]	92.7
PLN00033	398	photosystem II stability/assembly factor; Provisio	92.56
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	92.5
KOG1983|consensus	993		92.35
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	92.34
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	92.32
KOG1900|consensus	1311		92.15
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	91.96
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	91.82
COG4590	733	ABC-type uncharacterized transport system, permeas	91.75
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	91.7
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	91.35
PLN02153	341	epithiospecifier protein	91.21
KOG1896|consensus	1366		91.14
PF12768	281	Rax2: Cortical protein marker for cell polarity	91.13
KOG4460|consensus	741		90.92
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	90.89
PF10395	670	Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an	90.87
smart00036	302	CNH Domain found in NIK1-like kinases, mouse citro	90.65
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	90.45
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	89.96
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	89.94
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	89.28
PLN02193	470	nitrile-specifier protein	89.28
COG5276	370	Uncharacterized conserved protein [Function unknow	89.2
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	89.18
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	88.98
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	88.92

>KOG0271|consensus

Probab=100.00  E-value=1.5e-55  Score=335.33  Aligned_cols=305  Identities=17%  Similarity=0.257  Sum_probs=270.1

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      .+.||.++|.|++|  ++..|++|+.|.++|+||+.+..+..+.++|...|.|++|+|||+.||+|+.||+|++||.+++
T Consensus       110 S~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg  189 (480)
T KOG0271|consen  110 SIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTG  189 (480)
T ss_pred             ccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCC
Confidence            34599999999999  8999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             eEEEeEEecccCCceeeEEEec-----CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHP-----SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      +++..-..+|... |++++|.|     ..++|++++.||.++|||+..+.++..+..     |..+|+|+.|--+| +++
T Consensus       190 ~~~g~~l~gH~K~-It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsg-----HT~~VTCvrwGG~g-liy  262 (480)
T KOG0271|consen  190 QQIGRALRGHKKW-ITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSG-----HTASVTCVRWGGEG-LIY  262 (480)
T ss_pred             CcccccccCcccc-eeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEecc-----CccceEEEEEcCCc-eEE
Confidence            8765544899988 99999987     467999999999999999998887655433     35569999998766 667


Q ss_pred             eec-CCeEEEEEecCCceeeEec-CCCceeEEEee-----------cC--------------------------ceEEEe
Q psy7482         162 IPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFL-----------NE--------------------------TTVCTG  202 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~-----------~~--------------------------~~l~~~  202 (327)
                      +|+ |++|++|+...|+....++ |...|+.++.+           |.                          ..|++|
T Consensus       263 SgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSg  342 (480)
T KOG0271|consen  263 SGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSG  342 (480)
T ss_pred             ecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEe
Confidence            776 9999999999999999998 88889988877           11                          259999


Q ss_pred             CCCCcEEEEEcCC-CceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-
Q psy7482         203 NEESAITAYNLTD-GSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-  280 (327)
Q Consensus       203 ~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-  280 (327)
                      +.|.++.+|+... .+++..+.+|..-|+.+.|  |||++++|+++.|..|++||-++|+.+.+|++|-++|+.++|+. 
T Consensus       343 sDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~f--SPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaD  420 (480)
T KOG0271|consen  343 SDDFTLFLWNPFKSKKPITRMTGHQALVNHVSF--SPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSAD  420 (480)
T ss_pred             cCCceEEEecccccccchhhhhchhhheeeEEE--CCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccC
Confidence            9999999999654 4578889999999999999  59999999999999999999999999999999999999999999 


Q ss_pred             -cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         281 -NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       281 -~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                       ++|++|+.|.++++|++.+..    ...-...|..+|.++.|+||-
T Consensus       421 sRLlVS~SkDsTLKvw~V~tkK----l~~DLpGh~DEVf~vDwspDG  463 (480)
T KOG0271|consen  421 SRLLVSGSKDSTLKVWDVRTKK----LKQDLPGHADEVFAVDWSPDG  463 (480)
T ss_pred             ccEEEEcCCCceEEEEEeeeee----ecccCCCCCceEEEEEecCCC
Confidence             899999999999999999882    112223478899999999983

>KOG0272|consensus

Probab=100.00  E-value=1.4e-52  Score=322.69  Aligned_cols=277  Identities=17%  Similarity=0.272  Sum_probs=258.7

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCC--CCeEEEecCCCcEEEEEcCCCe
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      |-..+|..+.|  +++.||||+.+|.++||+..+...++++.+|...|.++.|+|.  +..||+|+.||++++|++.+..
T Consensus       173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~  252 (459)
T KOG0272|consen  173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET  252 (459)
T ss_pred             cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence            56788999999  9999999999999999999999999999999999999999996  6689999999999999999989


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      ++..+ .+|... |..++|+|+|++|++++.|.+-++||++++..+....     .|...|.+++|.|||.++++|+ |.
T Consensus       253 ~l~~l-~gH~~R-Vs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QE-----GHs~~v~~iaf~~DGSL~~tGGlD~  325 (459)
T KOG0272|consen  253 PLQDL-EGHLAR-VSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQE-----GHSKGVFSIAFQPDGSLAATGGLDS  325 (459)
T ss_pred             chhhh-hcchhh-heeeeecCCCceeeecccccchhhcccccchhhHhhc-----ccccccceeEecCCCceeeccCccc
Confidence            99999 899877 9999999999999999999999999999987754433     3344599999999999999998 99


Q ss_pred             eEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEE
Q psy7482         167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVC  244 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~  244 (327)
                      .-+|||++++..+..+. |..+|.+++|+|+ ..+++|+.|++++|||++..+.+.++.+|..-|+.+.|.| ..|.+|+
T Consensus       326 ~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p-~~g~fL~  404 (459)
T KOG0272|consen  326 LGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSP-QEGYFLV  404 (459)
T ss_pred             hhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecc-cCCeEEE
Confidence            99999999999999998 9999999999999 5689999999999999999999999999999999999963 4899999


Q ss_pred             EecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         245 TGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       245 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      +++.|+++++|...+..++..+.+|++.|.++++++  +.+++++.|.++++|.
T Consensus       405 TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  405 TASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             EcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence            999999999999999999999999999999999999  8999999999999995

>KOG0271|consensus

Probab=100.00  E-value=4.6e-50  Score=305.53  Aligned_cols=284  Identities=18%  Similarity=0.248  Sum_probs=252.5

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccc-cccccccccEEEEEECC-----CCCeEEEecC
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS-GALMQHEGTITCLKFTP-----EGSHLISCSD   74 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~   74 (327)
                      +..+.+..+||...|.|++|  ||+.||+|+.||+|++||.++++++ ..+.+|...|++++|.|     ..++||+++.
T Consensus       146 TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~sk  225 (480)
T KOG0271|consen  146 TETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSK  225 (480)
T ss_pred             CCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccC
Confidence            34566778899999999999  9999999999999999999998765 67899999999999987     5679999999


Q ss_pred             CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc
Q psy7482          75 DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS  154 (327)
Q Consensus        75 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  154 (327)
                      ||.++|||+..+.++..+ .+|..+ |+|+.|--+| ++++++.|++|++|+...|.....+..+.+     .|+.++.+
T Consensus       226 Dg~vrIWd~~~~~~~~~l-sgHT~~-VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkGHah-----wvN~lals  297 (480)
T KOG0271|consen  226 DGSVRIWDTKLGTCVRTL-SGHTAS-VTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKGHAH-----WVNHLALS  297 (480)
T ss_pred             CCCEEEEEccCceEEEEe-ccCccc-eEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcccch-----heeeeecc
Confidence            999999999999999999 999998 9999997555 899999999999999998887655544433     46666665


Q ss_pred             -----------cCC-------------------------cEEEeec-CCeEEEEEecCC-ceeeEec-CCCceeEEEeec
Q psy7482         155 -----------PEG-------------------------LLYAIPI-QNKAVVFSVEKA-GVLQTLK-SESKVHSVCFLN  195 (327)
Q Consensus       155 -----------~~~-------------------------~~l~~~~-~~~i~i~d~~~~-~~~~~~~-~~~~i~~~~~~~  195 (327)
                                 |.+                         ..+++|+ |.++.+|+.... +++..+. |..-|+.+.|+|
T Consensus       298 Tdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSP  377 (480)
T KOG0271|consen  298 TDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSP  377 (480)
T ss_pred             chhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECC
Confidence                       322                         3488887 889999987644 3665555 889999999999


Q ss_pred             C-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceE
Q psy7482         196 E-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIK  274 (327)
Q Consensus       196 ~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~  274 (327)
                      | .++++++.|..|++||.++|+.+.+|++|-.+|+.++|+  .|.++|++|+.|.++++||+++.+....+.+|.+.|.
T Consensus       378 d~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvaws--aDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf  455 (480)
T KOG0271|consen  378 DGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWS--ADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVF  455 (480)
T ss_pred             CccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEec--cCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEE
Confidence            9 889999999999999999999999999999999999995  8999999999999999999999999999999999999


Q ss_pred             EEeeeC--cEEEEEecCCcEEEEE
Q psy7482         275 GLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       275 ~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      ++.|+|  ..+++|+.|..+++|.
T Consensus       456 ~vDwspDG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  456 AVDWSPDGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             EEEecCCCceeecCCCceEEEeec
Confidence            999999  9999999999999995

>KOG0286|consensus

Probab=100.00  E-value=3.1e-46  Score=275.06  Aligned_cols=284  Identities=15%  Similarity=0.265  Sum_probs=255.9

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      ++..+..++||.+.|.++.|  |.+++++++.||.+.|||.-+...++.++-....|..++|+|.|+++|+|+-|+...|
T Consensus        44 ~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csi  123 (343)
T KOG0286|consen   44 QMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSI  123 (343)
T ss_pred             eeeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEE
Confidence            44555667799999999999  9999999999999999999998888888888899999999999999999999999999


Q ss_pred             EEcCCC------eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc
Q psy7482          81 FRVGSW------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS  154 (327)
Q Consensus        81 w~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  154 (327)
                      |++.+.      +..+.+ .+|.+. +.++.|.+| ..|++++.|.+..+||+++++....+.     .|...|.+++++
T Consensus       124 y~ls~~d~~g~~~v~r~l-~gHtgy-lScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f~-----GH~gDV~slsl~  195 (343)
T KOG0286|consen  124 YPLSTRDAEGNVRVSREL-AGHTGY-LSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVFH-----GHTGDVMSLSLS  195 (343)
T ss_pred             Eecccccccccceeeeee-cCccce-eEEEEEcCC-CceEecCCCceEEEEEcccceEEEEec-----CCcccEEEEecC
Confidence            999754      334456 899998 999999875 478999999999999999999876654     334559999999


Q ss_pred             c-CCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee--cccc
Q psy7482         155 P-EGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA--SASR  228 (327)
Q Consensus       155 ~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~  228 (327)
                      | +++.+++|+ |...++||++.+...+.|. |...|++++|.|+ .-+++|+.|++.++||++..+.+..+..  -..+
T Consensus       196 p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~g  275 (343)
T KOG0286|consen  196 PSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICG  275 (343)
T ss_pred             CCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCC
Confidence            9 889999997 9999999999999999998 9999999999999 6799999999999999999988887753  2358


Q ss_pred             eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         229 IKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       229 v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      |++++|+  ..|++|++|..|..+.+||.-.++.+..+.+|.+.|.++..+|  ..+++|+.|..++||.
T Consensus       276 itSv~FS--~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  276 ITSVAFS--KSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             ceeEEEc--ccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence            9999994  8999999999999999999999999999999999999999999  8999999999999994

>KOG0315|consensus

Probab=100.00  E-value=3.4e-45  Score=263.85  Aligned_cols=286  Identities=14%  Similarity=0.254  Sum_probs=246.5

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCc
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTA  100 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~  100 (327)
                      +.-+|++++.|.+||+|...+|.+.++++...+.|+.+...|+++.||+++.- .|++||+++++  ++..+ .+|.+. 
T Consensus         9 ~~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~Pv~t~-e~h~kN-   85 (311)
T KOG0315|consen    9 DPVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPNPVATF-EGHTKN-   85 (311)
T ss_pred             CceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCCceeEE-eccCCc-
Confidence            34589999999999999999999999999888899999999999999988865 79999998765  57777 888888 


Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCcee
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVL  179 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~  179 (327)
                      |.++.|..+|+.+++|++||+++|||++...+...+....      +|+++..+|+...|++|. +|.|++||+......
T Consensus        86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~s------pVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~  159 (311)
T KOG0315|consen   86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNS------PVNTVVLHPNQTELISGDQSGNIRVWDLGENSCT  159 (311)
T ss_pred             eEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCC------CcceEEecCCcceEEeecCCCcEEEEEccCCccc
Confidence            9999999999999999999999999999866655555443      499999999988888887 999999999988766


Q ss_pred             eEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC------ceeEEeeecccceEEEEEEecCCCcEEEEecCCC
Q psy7482         180 QTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG------SHLWQIKASASRIKGLVFFSIPQETTVCTGNEES  250 (327)
Q Consensus       180 ~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~  250 (327)
                      ..+-  ....|.++...|| .+++.+...|..++|++-+.      +++.+++.|++-+..+.+  ||++++|++++.|.
T Consensus       160 ~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~l--SPd~k~lat~ssdk  237 (311)
T KOG0315|consen  160 HELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLL--SPDVKYLATCSSDK  237 (311)
T ss_pred             cccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEE--CCCCcEEEeecCCc
Confidence            6654  4578999999999 78888899999999998664      356778999999999999  59999999999999


Q ss_pred             eEEEEEcCCC-ceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeC
Q psy7482         251 AITAYNLTDG-SHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIR  323 (327)
Q Consensus       251 ~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~  323 (327)
                      +++||+.++. +....+++|...+++.+|+.  .+|++|+.|+.+++|++..+.  +...  ...|.....|++.+
T Consensus       238 tv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k--~v~q--y~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  238 TVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGK--EVRQ--YQGHHKAAVCVALN  309 (311)
T ss_pred             eEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCc--eeee--cCCcccccEEEEee
Confidence            9999999988 66778899999999999999  999999999999999999982  2222  22344456677665

>KOG0279|consensus

Probab=100.00  E-value=6.8e-44  Score=261.08  Aligned_cols=285  Identities=18%  Similarity=0.326  Sum_probs=243.3

Q ss_pred             EEeeeeccCCccEEEEEe---CCCEEEEecCCCeEEEEEccc-----cccccccccccccEEEEEECCCCCeEEEecCCC
Q psy7482           5 TQTFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVK-----RKQSGALMQHEGTITCLKFTPEGSHLISCSDDG   76 (327)
Q Consensus         5 ~~~~~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~   76 (327)
                      ...-.+++|.+.|+.++.   +.+.+++++.|.++.+|++..     |.+++.+.+|+..|..+..++||++.++++.|+
T Consensus         6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~   85 (315)
T KOG0279|consen    6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDG   85 (315)
T ss_pred             eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccc
Confidence            344456699999999999   678999999999999998753     567888999999999999999999999999999


Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  156 (327)
                      ++++||+.+++..+.| .+|... |.+++|++|.+.+++|+.|.+|++|+.. +.+...+.....   .+.|.|+.|+|+
T Consensus        86 ~lrlWDl~~g~~t~~f-~GH~~d-Vlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~---~~WVscvrfsP~  159 (315)
T KOG0279|consen   86 TLRLWDLATGESTRRF-VGHTKD-VLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSH---REWVSCVRFSPN  159 (315)
T ss_pred             eEEEEEecCCcEEEEE-EecCCc-eEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCCC---cCcEEEEEEcCC
Confidence            9999999999999999 999998 9999999999999999999999999986 444444333221   567999999998


Q ss_pred             --CcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEE
Q psy7482         157 --GLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKG  231 (327)
Q Consensus       157 --~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~  231 (327)
                        ..+++.++ |+++++||+++.+....+. |.+.++.++++|| .+.++|+.||.+.+||++.++.+..+. |...|.+
T Consensus       160 ~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~s  238 (315)
T KOG0279|consen  160 ESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNS  238 (315)
T ss_pred             CCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEee
Confidence              56777777 9999999999999888877 8899999999999 778899999999999999999987765 7788999


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc---------cCceEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS---------ASRIKGLASHR--NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---------~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~  299 (327)
                      ++|.  |+.-.|+.+ .+..|+|||+.++..+.++...         .....+++|++  ..|++|..|+.|++|.+..
T Consensus       239 l~fs--pnrywL~~a-t~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~~  314 (315)
T KOG0279|consen  239 LCFS--PNRYWLCAA-TATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVAK  314 (315)
T ss_pred             EEec--CCceeEeec-cCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEeec
Confidence            9994  666666555 4556999999999877666521         22356788997  9999999999999999753

>KOG0272|consensus

Probab=100.00  E-value=1.1e-45  Score=284.85  Aligned_cols=262  Identities=17%  Similarity=0.281  Sum_probs=237.3

Q ss_pred             cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCC
Q psy7482          52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~  129 (327)
                      +.+.+|..+.|+++++.|+||+.+|.+++|+..+.+.+.++ .+|... +.++.|+|.  +..+++|+.||++++|++.+
T Consensus       173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l-~gH~~~-v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~  250 (459)
T KOG0272|consen  173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTL-RGHTSR-VGAAVFHPVDSDLNLATASADGTVKLWKLSQ  250 (459)
T ss_pred             cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEE-eccccc-eeeEEEccCCCccceeeeccCCceeeeccCC
Confidence            45679999999999999999999999999999999999999 999999 999999995  66899999999999999988


Q ss_pred             CceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCC
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEES  206 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~  206 (327)
                      ...+..+.     .|...|..++|+|+|++|++++ |.+-++||+++++.+.... |...|.+++|.|| .++++|+.|.
T Consensus       251 e~~l~~l~-----gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~  325 (459)
T KOG0272|consen  251 ETPLQDLE-----GHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDS  325 (459)
T ss_pred             Ccchhhhh-----cchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccc
Confidence            76655443     3345599999999999999998 9999999999998776666 9999999999999 7788999999


Q ss_pred             cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEE
Q psy7482         207 AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHL  283 (327)
Q Consensus       207 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l  283 (327)
                      .-+|||++++.++..+.+|..+|.+++|  +|+|..||+|+.|++++|||++...++.++.+|.+-|+.+.|+|   .+|
T Consensus       326 ~~RvWDlRtgr~im~L~gH~k~I~~V~f--sPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL  403 (459)
T KOG0272|consen  326 LGRVWDLRTGRCIMFLAGHIKEILSVAF--SPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFL  403 (459)
T ss_pred             hhheeecccCcEEEEecccccceeeEeE--CCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEE
Confidence            9999999999999999999999999999  59999999999999999999999999999999999999999998   999


Q ss_pred             EEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         284 ICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       284 ~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +|++.|++++||.-.+..  ..+.  ...|.++|.+++.+|+.
T Consensus       404 ~TasyD~t~kiWs~~~~~--~~ks--LaGHe~kV~s~Dis~d~  442 (459)
T KOG0272|consen  404 VTASYDNTVKIWSTRTWS--PLKS--LAGHEGKVISLDISPDS  442 (459)
T ss_pred             EEcccCcceeeecCCCcc--cchh--hcCCccceEEEEeccCC
Confidence            999999999999998872  2222  24577889999999974

>KOG0295|consensus

Probab=100.00  E-value=9.4e-45  Score=274.69  Aligned_cols=281  Identities=19%  Similarity=0.324  Sum_probs=257.7

Q ss_pred             eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      .++.||..+|+.+-|  +..++++++.|++|++||..+++....+++|.+.+..++|+..|++|++++.|-.+++||..+
T Consensus       102 ~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~  181 (406)
T KOG0295|consen  102 QKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDT  181 (406)
T ss_pred             hhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHH
Confidence            345589999999999  666788889999999999999999999999999999999999999999999998899999986


Q ss_pred             -CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          86 -WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        86 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                       .++++.+ .+|... |.++.|-|.|.++++++.|.+|+.|++.++.++..+..+.     ..+..+..+.||.++++++
T Consensus       182 ~~~c~ks~-~gh~h~-vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~-----ewvr~v~v~~DGti~As~s  254 (406)
T KOG0295|consen  182 FFRCIKSL-IGHEHG-VSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHS-----EWVRMVRVNQDGTIIASCS  254 (406)
T ss_pred             HHHHHHHh-cCcccc-eeeEEEEecCCeeeecccccceeEEecccceeEEeccCch-----HhEEEEEecCCeeEEEecC
Confidence             4556666 788888 9999999999999999999999999999999977765443     4699999999999999998


Q ss_pred             -CCeEEEEEecCCceeeEec-CCCceeEEEeecC----------------ceEEEeCCCCcEEEEEcCCCceeEEeeecc
Q psy7482         165 -QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE----------------TTVCTGNEESAITAYNLTDGSHLWQIKASA  226 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~----------------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  226 (327)
                       |.++++|-+.++++...+. |+.++.+++|.|.                .++.+++.|++|++||+.++.++.++.+|.
T Consensus       255 ~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghd  334 (406)
T KOG0295|consen  255 NDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHD  334 (406)
T ss_pred             CCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEeccc
Confidence             9999999999998888887 8889999998642                278899999999999999999999999999


Q ss_pred             cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482         227 SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWEL  297 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~  297 (327)
                      ..|..++|+  |.|+||+++.+|+++++||+++++++..+..|..-+++++|+.  .++++|+-|.++++|..
T Consensus       335 nwVr~~af~--p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  335 NWVRGVAFS--PGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             ceeeeeEEc--CCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence            999999995  9999999999999999999999999999999999999999998  99999999999999974

>KOG0286|consensus

Probab=100.00  E-value=1.6e-42  Score=255.60  Aligned_cols=272  Identities=15%  Similarity=0.224  Sum_probs=238.1

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN  126 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  126 (327)
                      .+++++|.+.|.++.|++|.++|++++.||.+.|||.-+.+..+.+ +-.... |..++|+|.|+++++|+.|+...||+
T Consensus        48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~hai-pl~s~W-VMtCA~sPSg~~VAcGGLdN~Csiy~  125 (343)
T KOG0286|consen   48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAI-PLPSSW-VMTCAYSPSGNFVACGGLDNKCSIYP  125 (343)
T ss_pred             EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEE-ecCcee-EEEEEECCCCCeEEecCcCceeEEEe
Confidence            3789999999999999999999999999999999999988888887 556666 99999999999999999999999999


Q ss_pred             cCCCceeeeee-ccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeec-C-ceEEEe
Q psy7482         127 LVKGRSAYITN-LSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLN-E-TTVCTG  202 (327)
Q Consensus       127 ~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~-~-~~l~~~  202 (327)
                      +.+.......+ ......|...+.++.|-+|++++..++|.+..+||+++++.+..+. |.+.|.++.++| + +.+++|
T Consensus       126 ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg  205 (343)
T KOG0286|consen  126 LSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSG  205 (343)
T ss_pred             cccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEec
Confidence            98652221111 2223455677999999998777766679999999999999999998 999999999999 5 899999


Q ss_pred             CCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc--cCceEEEeeeC
Q psy7482         203 NEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS--ASRIKGLASHR  280 (327)
Q Consensus       203 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~  280 (327)
                      +.|+..++||++.+..+++|.+|+..|+++.|+  |+|.-+++|++|++.++||++..+.+..+...  ..+|++++|+.
T Consensus       206 ~cD~~aklWD~R~~~c~qtF~ghesDINsv~ff--P~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~  283 (343)
T KOG0286|consen  206 GCDKSAKLWDVRSGQCVQTFEGHESDINSVRFF--PSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSK  283 (343)
T ss_pred             ccccceeeeeccCcceeEeecccccccceEEEc--cCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcc
Confidence            999999999999999999999999999999998  89999999999999999999999988887743  36899999998


Q ss_pred             --cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         281 --NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       281 --~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                        ++|++|..|.++.+||.-.+.    ..-....|..+|+||..+||-
T Consensus       284 SGRlLfagy~d~~c~vWDtlk~e----~vg~L~GHeNRvScl~~s~DG  327 (343)
T KOG0286|consen  284 SGRLLFAGYDDFTCNVWDTLKGE----RVGVLAGHENRVSCLGVSPDG  327 (343)
T ss_pred             cccEEEeeecCCceeEeeccccc----eEEEeeccCCeeEEEEECCCC
Confidence              999999999999999998872    223345688999999999985

>KOG0284|consensus

Probab=100.00  E-value=4.4e-45  Score=280.31  Aligned_cols=278  Identities=17%  Similarity=0.294  Sum_probs=247.6

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .-+|..+.|  +|+.|++|+..|.+.+|+.........++.|..+|.++.|++++.++++|+.+|.|++|+.... .++.
T Consensus        96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-nVk~  174 (464)
T KOG0284|consen   96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-NVKI  174 (464)
T ss_pred             ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh-hhHH
Confidence            357888899  8999999999999999998777777778899999999999999999999999999999998654 4445


Q ss_pred             EEeccc-CCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEE
Q psy7482          92 FKKAHK-GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAV  169 (327)
Q Consensus        92 ~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~  169 (327)
                      + ..|. .. |++++|+|+...+++++.||+|+|||....+....+..+..     .|.+++|+|...++++++ |+.|+
T Consensus       175 ~-~ahh~ea-IRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgw-----dVksvdWHP~kgLiasgskDnlVK  247 (464)
T KOG0284|consen  175 I-QAHHAEA-IRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGW-----DVKSVDWHPTKGLIASGSKDNLVK  247 (464)
T ss_pred             h-hHhhhhh-hheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCC-----CcceeccCCccceeEEccCCceeE
Confidence            5 4555 55 99999999999999999999999999988776555543333     499999999999999998 89999


Q ss_pred             EEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec
Q psy7482         170 VFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN  247 (327)
Q Consensus       170 i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~  247 (327)
                      +||.+++.++.++. |...|..+.|.|+ ++|++++.|..+++||+++.+.++++++|+..++++.|+| -...+|.+|+
T Consensus       248 lWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP-~~~~lftsgg  326 (464)
T KOG0284|consen  248 LWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHP-LNESLFTSGG  326 (464)
T ss_pred             eecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeecccc-ccccceeecc
Confidence            99999999999887 8999999999999 9999999999999999999999999999999999999996 6788999999


Q ss_pred             CCCeEEEEEcCCCceeEEe-ecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         248 EESAITAYNLTDGSHLWHI-KASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       248 ~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .||.|..|.+...+++..+ .+|...|++++|+|  .+|++|+.|.++++|.-...
T Consensus       327 ~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp  382 (464)
T KOG0284|consen  327 SDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRP  382 (464)
T ss_pred             CCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccCCC
Confidence            9999999999866655554 47999999999999  99999999999999987654

>KOG0285|consensus

Probab=100.00  E-value=1.5e-43  Score=267.86  Aligned_cols=287  Identities=17%  Similarity=0.303  Sum_probs=254.7

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEE
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIA   79 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~   79 (327)
                      |++.+.++  ||.+.|.|+++  .+++|++|+.|++++|||+.++++..++.+|-..|..+++++...||++++.|+.|+
T Consensus       141 wKl~rVi~--gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VK  218 (460)
T KOG0285|consen  141 WKLYRVIS--GHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVK  218 (460)
T ss_pred             ceehhhhh--hccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeE
Confidence            55666655  99999999999  678999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE
Q psy7482          80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL  159 (327)
Q Consensus        80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  159 (327)
                      .||++..+.++.+ .+|... |.+++.+|.-..|++|+.|..+++||+++...+..+..     |..+|.++.+.|-+..
T Consensus       219 CwDLe~nkvIR~Y-hGHlS~-V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~G-----H~~~V~~V~~~~~dpq  291 (460)
T KOG0285|consen  219 CWDLEYNKVIRHY-HGHLSG-VYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSG-----HTNPVASVMCQPTDPQ  291 (460)
T ss_pred             EEechhhhhHHHh-ccccce-eEEEeccccceeEEecCCcceEEEeeecccceEEEecC-----CCCcceeEEeecCCCc
Confidence            9999999999999 999998 99999999989999999999999999999887666543     3456999999997777


Q ss_pred             EEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEe
Q psy7482         160 YAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFS  236 (327)
Q Consensus       160 l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~  236 (327)
                      +++|+ |++|++||++.++....+. |...+.+++.+|. ..+++++.| .|+-|++..+..+..+.+|...+.+++.  
T Consensus       292 vit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~--  368 (460)
T KOG0285|consen  292 VITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSV--  368 (460)
T ss_pred             eEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeee--
Confidence            77877 9999999999999988887 7889999999999 566666655 6899999999999999999999999998  


Q ss_pred             cCCCcEEEEecCCCeEEEEEcCCCceeEEeec--------ccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482         237 IPQETTVCTGNEESAITAYNLTDGSHLWHIKA--------SASRIKGLASHR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       237 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                       ....++++|++.|.+.+||.+++...+..+.        .+..|++.+|..  ..|++|..|.+|++|.-+...
T Consensus       369 -nsD~v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~a  442 (460)
T KOG0285|consen  369 -NSDGVLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEHA  442 (460)
T ss_pred             -ccCceEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEeccccc
Confidence             5678999999999999999999875554421        235688888988  899999999999999987774

>KOG0293|consensus

Probab=100.00  E-value=4.6e-44  Score=275.32  Aligned_cols=285  Identities=14%  Similarity=0.231  Sum_probs=245.9

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc---ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      .++.|.+.|.-+.|  +|++||+++.|.+..+|++...   +..+++.+|..+|..+.|+||.++|++++.|..+.+||+
T Consensus       219 il~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv  298 (519)
T KOG0293|consen  219 ILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDV  298 (519)
T ss_pred             hHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccC
Confidence            34589999999999  9999999999999999987654   347788899999999999999999999999999999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      .+|.....+..++... +.+++|.|||..+++|+.|+.+..||++.. .........    ...|.+++..+||+.++..
T Consensus       299 ~tgd~~~~y~~~~~~S-~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn-~~~~W~gvr----~~~v~dlait~Dgk~vl~v  372 (519)
T KOG0293|consen  299 DTGDLRHLYPSGLGFS-VSSCAWCPDGFRFVTGSPDRTIIMWDLDGN-ILGNWEGVR----DPKVHDLAITYDGKYVLLV  372 (519)
T ss_pred             CcchhhhhcccCcCCC-cceeEEccCCceeEecCCCCcEEEecCCcc-hhhcccccc----cceeEEEEEcCCCcEEEEE
Confidence            9999999986665555 999999999999999999999999998643 322221111    1339999999999877666


Q ss_pred             c-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceE--EEEEEecCC
Q psy7482         164 I-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIK--GLVFFSIPQ  239 (327)
Q Consensus       164 ~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~--~~~~~~s~~  239 (327)
                      . |..|++|+.++......+....+|++++.+.+ .++++.-.+..+++||++..+.+.++.+|...-.  .-+|- ..+
T Consensus       373 ~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFg-g~~  451 (519)
T KOG0293|consen  373 TVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFG-GGN  451 (519)
T ss_pred             ecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccC-CCC
Confidence            5 99999999988877777778899999999999 6777888999999999998888999999876433  33443 256


Q ss_pred             CcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCc
Q psy7482         240 ETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       240 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ..++++|++|+.|+||+..+++++..+.+|...|++++|+|   .++|+||+||+||||.....
T Consensus       452 ~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~  515 (519)
T KOG0293|consen  452 DKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN  515 (519)
T ss_pred             cceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence            68999999999999999999999999999999999999999   89999999999999988754

>KOG0273|consensus

Probab=100.00  E-value=9.1e-43  Score=272.21  Aligned_cols=304  Identities=15%  Similarity=0.224  Sum_probs=261.1

Q ss_pred             eeccCCccEEEEEe---CCCEEEEecCCCeEEEEEcccc----ccccccc------c----ccccEEEEEECCCCCeEEE
Q psy7482           9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR----KQSGALM------Q----HEGTITCLKFTPEGSHLIS   71 (327)
Q Consensus         9 ~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~----~~~~~~~------~----~~~~v~~~~~~~~~~~l~~   71 (327)
                      +...|..+|.+.+|   ...++++|+.|-..++|++...    .....++      +    .+..|++++|+.+|..||+
T Consensus       173 kvl~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat  252 (524)
T KOG0273|consen  173 KVLRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT  252 (524)
T ss_pred             eeccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence            34459999999999   4558999999999999998751    1111111      1    2357999999999999999


Q ss_pred             ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEE
Q psy7482          72 CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSV  151 (327)
Q Consensus        72 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  151 (327)
                      |+.||.+++|+.. |..+.++ ..|.++ |.++.|+..|.+|++++.||++.+||..+++..+.+.+....     -..+
T Consensus       253 G~~~G~~riw~~~-G~l~~tl-~~HkgP-I~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~-----~lDV  324 (524)
T KOG0273|consen  253 GSEDGEARIWNKD-GNLISTL-GQHKGP-IFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAP-----ALDV  324 (524)
T ss_pred             eecCcEEEEEecC-chhhhhh-hccCCc-eEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCC-----ccce
Confidence            9999999999975 5667777 777777 999999999999999999999999999999998888877652     3678


Q ss_pred             EEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccce
Q psy7482         152 VWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRI  229 (327)
Q Consensus       152 ~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v  229 (327)
                      .|-.+..+..++.|+.|+++.+....+..++. |.++|.++.|.|. .+|++++.|++++||+.......+.+.+|...|
T Consensus       325 dW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei  404 (524)
T KOG0273|consen  325 DWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEI  404 (524)
T ss_pred             EEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccce
Confidence            89877776666679999999999999999888 8999999999998 889999999999999999999999999999999


Q ss_pred             EEEEEEec-------CCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         230 KGLVFFSI-------PQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       230 ~~~~~~~s-------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +.+.|+|.       ..+..+++++.|++|++||+..+.+++.+..|..+|++++|+|  +++|+|+.||.|.+|+...+
T Consensus       405 ~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~  484 (524)
T KOG0273|consen  405 YTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTG  484 (524)
T ss_pred             eeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccch
Confidence            99999631       1345799999999999999999999999999999999999999  99999999999999999998


Q ss_pred             cCCCceeeeecCCCCceEEEEeCCC
Q psy7482         301 VTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       301 ~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                           +.+......+.|..++|+-+
T Consensus       485 -----~l~~s~~~~~~Ifel~Wn~~  504 (524)
T KOG0273|consen  485 -----KLVKSYQGTGGIFELCWNAA  504 (524)
T ss_pred             -----heeEeecCCCeEEEEEEcCC
Confidence                 44555555666899998754

>KOG0281|consensus

Probab=100.00  E-value=4.6e-44  Score=270.09  Aligned_cols=274  Identities=14%  Similarity=0.291  Sum_probs=241.8

Q ss_pred             cCCccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          12 SHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        12 ~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .....|.|+.+|...+++|..|++|+|||..+..+...+.+|++.|.|+.|.  .+.|++|+.|.+|++||+++++++.+
T Consensus       195 e~skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~t  272 (499)
T KOG0281|consen  195 ENSKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNT  272 (499)
T ss_pred             ccCCceEEEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhH
Confidence            3567899999999999999999999999999999999999999999999996  56999999999999999999999999


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEE
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVV  170 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i  170 (327)
                      + ..|... |..+.|+  ..++++++.|.++.+||+.....+...  .-...|...|+.+.|+.  +++++++ |.+|++
T Consensus       273 l-ihHcea-VLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~r--rVLvGHrAaVNvVdfd~--kyIVsASgDRTikv  344 (499)
T KOG0281|consen  273 L-IHHCEA-VLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLR--RVLVGHRAAVNVVDFDD--KYIVSASGDRTIKV  344 (499)
T ss_pred             H-hhhcce-eEEEEEe--CCEEEEecCCceeEEEeccCchHHHHH--HHHhhhhhheeeecccc--ceEEEecCCceEEE
Confidence            9 888888 9999998  459999999999999999876532221  11233455688888874  4888876 999999


Q ss_pred             EEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC
Q psy7482         171 FSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE  249 (327)
Q Consensus       171 ~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d  249 (327)
                      |++.+++.+.++. |...|.|+.+. +.++++|+.|.+|++||+..|.+++.+++|+.-|.++.|    +.+.+++|+.|
T Consensus       345 W~~st~efvRtl~gHkRGIAClQYr-~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF----d~krIVSGaYD  419 (499)
T KOG0281|consen  345 WSTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGAYD  419 (499)
T ss_pred             Eeccceeeehhhhcccccceehhcc-CeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee----cCceeeecccc
Confidence            9999999999998 88889888873 478999999999999999999999999999999999998    68899999999


Q ss_pred             CeEEEEEcCCCc---------eeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         250 SAITAYNLTDGS---------HLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       250 ~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      |+|++||+..+.         ++.++..|.+.|..+.|....+++++.|.+|.|||+..+
T Consensus       420 GkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD~fqIvsssHddtILiWdFl~~  479 (499)
T KOG0281|consen  420 GKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNG  479 (499)
T ss_pred             ceEEEEecccccCCcccccchHHHhhhhccceeEEEeecceEEEeccCCCeEEEEEcCCC
Confidence            999999998754         445666799999999999988999999999999999887

>KOG0282|consensus

Probab=100.00  E-value=4.2e-44  Score=280.46  Aligned_cols=283  Identities=14%  Similarity=0.242  Sum_probs=246.7

Q ss_pred             EeeeeccCCccEEEEEe---CCCEEEEecCCCeEEEEEccc-cccccccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482           6 QTFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVK-RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF   81 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw   81 (327)
                      .++.++||...|+++.|   .+.+|++++.|+.|+||++.. +++++++.+|..+|.+++|+++|..+++++.|+.+++|
T Consensus       206 ~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlw  285 (503)
T KOG0282|consen  206 LSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLW  285 (503)
T ss_pred             heeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeee
Confidence            34566799999999999   789999999999999999987 89999999999999999999999999999999999999


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY  160 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  160 (327)
                      |+++|++...+   +.+..+.|+.|+|++ +.+++|+.|+.|+.||+++++.++.+.     .|-+.+..+.|-++|+.+
T Consensus       286 DtETG~~~~~f---~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd-----~hLg~i~~i~F~~~g~rF  357 (503)
T KOG0282|consen  286 DTETGQVLSRF---HLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYD-----RHLGAILDITFVDEGRRF  357 (503)
T ss_pred             ccccceEEEEE---ecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHH-----hhhhheeeeEEccCCceE
Confidence            99999999988   444448999999987 889999999999999999999755443     334569999999999999


Q ss_pred             Eeec-CCeEEEEEecCCceeeEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc---eeEEeeecccceEEEE
Q psy7482         161 AIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS---HLWQIKASASRIKGLV  233 (327)
Q Consensus       161 ~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~  233 (327)
                      ++++ |+++++|+.+....++...  ......++..+|+ +.+++-+.|+.|.+|.+...-   ....+++|..+=.++.
T Consensus       358 issSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~  437 (503)
T KOG0282|consen  358 ISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQ  437 (503)
T ss_pred             eeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceee
Confidence            9887 8999999999888777665  4456778889998 889999999999999875432   2345677765444443


Q ss_pred             EEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEE
Q psy7482         234 FFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWE  296 (327)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~  296 (327)
                      ...||||++|++|+.||.+.+||.++-+++..+++|.+++..+.|+|   ..+|+++.||.|++|+
T Consensus       438 v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  438 VDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             EEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence            33369999999999999999999999999999999999999999999   8999999999999996

>KOG0318|consensus

Probab=100.00  E-value=4.9e-41  Score=266.00  Aligned_cols=312  Identities=16%  Similarity=0.303  Sum_probs=255.3

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc---cccccEEEEEECCCCCeEEEecCCC
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM---QHEGTITCLKFTPEGSHLISCSDDG   76 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~   76 (327)
                      |+++.+++  .|+.-|.|+.|  ||.++|+++.||++.+||=.+++.+..+.   +|.+.|.+++|+||+..+++++.|.
T Consensus       180 FKFk~s~r--~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk  257 (603)
T KOG0318|consen  180 FKFKSSFR--EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK  257 (603)
T ss_pred             eeeeeccc--ccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc
Confidence            44555554  79999999999  99999999999999999999999998888   8999999999999999999999999


Q ss_pred             cEEEEEcCCCeEEEeEE------------------------------------------ecccCCceeeEEEecCCCEEE
Q psy7482          77 SIAIFRVGSWQLEKLFK------------------------------------------KAHKGTAVNHISIHPSGKLAL  114 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~------------------------------------------~~~~~~~v~~~~~~~~~~~l~  114 (327)
                      +++|||+.+.++++++.                                          .+|... |+++..+|++++|+
T Consensus       258 t~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~-ITaLtv~~d~~~i~  336 (603)
T KOG0318|consen  258 TIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKS-ITALTVSPDGKTIY  336 (603)
T ss_pred             eEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccc-eeEEEEcCCCCEEE
Confidence            99999998766554442                                          577777 99999999999999


Q ss_pred             EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCce----------------
Q psy7482         115 SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV----------------  178 (327)
Q Consensus       115 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~----------------  178 (327)
                      +|+.||.|.-|+..++..-...    ...|...|.+++-+..+.++.++-|.++++.++..+..                
T Consensus       337 SgsyDG~I~~W~~~~g~~~~~~----g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~la  412 (603)
T KOG0318|consen  337 SGSYDGHINSWDSGSGTSDRLA----GKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLA  412 (603)
T ss_pred             eeccCceEEEEecCCccccccc----cccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEE
Confidence            9999999999999887653322    12234558888888878888888888888887643110                


Q ss_pred             ------------------------eeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce--eEEeeecccceEE
Q psy7482         179 ------------------------LQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH--LWQIKASASRIKG  231 (327)
Q Consensus       179 ------------------------~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~  231 (327)
                                              +..........+++++|+ ..+++|+.|+.+++|.+.....  ......|.+++++
T Consensus       413 v~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~  492 (603)
T KOG0318|consen  413 VLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITD  492 (603)
T ss_pred             EcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceE
Confidence                                    001112334678899999 8899999999999999987553  3345679999999


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCcee-EEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceee
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHL-WHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRV  308 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~  308 (327)
                      +++  ||++.+||++...+.+.+||+.+.+.. ..+.-|...|.+++|+|  .++|+|+.|-.|.||+++.+.   ....
T Consensus       493 vay--Spd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~---~~i~  567 (603)
T KOG0318|consen  493 VAY--SPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPA---KHII  567 (603)
T ss_pred             EEE--CCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChh---hheE
Confidence            999  599999999999999999999988753 34445999999999999  999999999999999999984   3344


Q ss_pred             eecCCCCceEEEEeCCC
Q psy7482         309 SATNDGCRFTCLAIRPP  325 (327)
Q Consensus       309 ~~~~~~~~i~~l~~~p~  325 (327)
                      ....|...|+.++|-.+
T Consensus       568 iknAH~~gVn~v~wlde  584 (603)
T KOG0318|consen  568 IKNAHLGGVNSVAWLDE  584 (603)
T ss_pred             eccccccCceeEEEecC
Confidence            44556666999999765

>KOG0316|consensus

Probab=100.00  E-value=2.4e-42  Score=247.31  Aligned_cols=282  Identities=16%  Similarity=0.252  Sum_probs=242.4

Q ss_pred             eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC
Q psy7482           7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG   84 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~   84 (327)
                      .-.+.+|+++|.++.|  +|+|.++++.|.+|++|+...+.+++++.+|..+|..++.+.|+..+++|+.|+.+.+||++
T Consensus        10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~   89 (307)
T KOG0316|consen   10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN   89 (307)
T ss_pred             ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence            3345689999999999  99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      +|+..+.+ .+|... |+.+.|+.+...+++|+.|.++++||.++........+...   .+.|.++...  +..+++|+
T Consensus        90 TGkv~Rr~-rgH~aq-VNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea---~D~V~Si~v~--~heIvaGS  162 (307)
T KOG0316|consen   90 TGKVDRRF-RGHLAQ-VNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEA---KDGVSSIDVA--EHEIVAGS  162 (307)
T ss_pred             cCeeeeec-ccccce-eeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhh---cCceeEEEec--ccEEEeec
Confidence            99999999 999998 99999999999999999999999999987654443333333   3448888776  45677776


Q ss_pred             -CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcE
Q psy7482         165 -QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT  242 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~  242 (327)
                       ||+++.||++.|...... ...+|++++|+++ +..++++.|+++++.|-.+|+.+..+++|...-+.+...-+.....
T Consensus       163 ~DGtvRtydiR~G~l~sDy-~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdth  241 (307)
T KOG0316|consen  163 VDGTVRTYDIRKGTLSSDY-FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTH  241 (307)
T ss_pred             cCCcEEEEEeecceeehhh-cCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeeccccee
Confidence             999999999988754433 4678999999999 8899999999999999999999999999988666555443467889


Q ss_pred             EEEecCCCeEEEEEcCCCceeEEeecccCc-eEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482         243 VCTGNEESAITAYNLTDGSHLWHIKASASR-IKGLASHR--NHLICITSAGDLVVWEL  297 (327)
Q Consensus       243 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~--~~l~~~~~dg~v~iw~~  297 (327)
                      +++|++||.+++||+.+...+..+..+... +.+++++|  ..++++. ++.+..|.-
T Consensus       242 V~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~-~~~~~~~~~  298 (307)
T KOG0316|consen  242 VFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITAT-GHGDLFWYQ  298 (307)
T ss_pred             EEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEec-CCceeceee
Confidence            999999999999999999999999988877 89999999  5555555 344555543

>KOG0279|consensus

Probab=100.00  E-value=1.6e-41  Score=248.67  Aligned_cols=247  Identities=17%  Similarity=0.288  Sum_probs=217.5

Q ss_pred             ccccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcC-----CCeEEEeEEecccCCceeeEEEecCCCEEEEEeC
Q psy7482          45 KQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVG-----SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK  118 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  118 (327)
                      ....++++|++.|+.++..+. .+.+++++.|.++.+|++.     .|.+.+.+ .+|... |..+..+++|++.++++.
T Consensus         6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~-~GHsH~-v~dv~~s~dg~~alS~sw   83 (315)
T KOG0279|consen    6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRL-TGHSHF-VSDVVLSSDGNFALSASW   83 (315)
T ss_pred             eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeee-eccceE-ecceEEccCCceEEeccc
Confidence            345678899999999999886 5688899999999999874     36677888 888888 999999999999999999


Q ss_pred             CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeec
Q psy7482         119 DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLN  195 (327)
Q Consensus       119 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~  195 (327)
                      |+.+++||+.+++..+.+..+..     .|.+++|+||++.+++|+ |.+|.+|++..........  +...|.++.|+|
T Consensus        84 D~~lrlWDl~~g~~t~~f~GH~~-----dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP  158 (315)
T KOG0279|consen   84 DGTLRLWDLATGESTRRFVGHTK-----DVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSP  158 (315)
T ss_pred             cceEEEEEecCCcEEEEEEecCC-----ceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcC
Confidence            99999999999987666655443     499999999999999999 9999999987655544444  378999999999


Q ss_pred             C---ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCc
Q psy7482         196 E---TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASR  272 (327)
Q Consensus       196 ~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  272 (327)
                      +   .++++++.|++|++||+++.+....+.+|.+.++.+++  ||||...++|+.||.+.+||++.++.+..+. |...
T Consensus       159 ~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~v--SpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~  235 (315)
T KOG0279|consen  159 NESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTV--SPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDI  235 (315)
T ss_pred             CCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEE--CCCCCEEecCCCCceEEEEEccCCceeEecc-CCCe
Confidence            7   57999999999999999999999999999999999999  5999999999999999999999999988877 6669


Q ss_pred             eEEEeeeC-cEEEEEecCCcEEEEEccCcc
Q psy7482         273 IKGLASHR-NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       273 v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      |.+++|+| ++.+++..+..|+|||+.+..
T Consensus       236 v~sl~fspnrywL~~at~~sIkIwdl~~~~  265 (315)
T KOG0279|consen  236 VNSLCFSPNRYWLCAATATSIKIWDLESKA  265 (315)
T ss_pred             EeeEEecCCceeEeeccCCceEEEeccchh
Confidence            99999999 666667777789999999874

>KOG0318|consensus

Probab=100.00  E-value=6e-41  Score=265.49  Aligned_cols=309  Identities=17%  Similarity=0.313  Sum_probs=258.5

Q ss_pred             eeccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         9 ~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      .+.||+..|++++|   ..-.++||+.|++|.+|+=...+...++..|..-|+|+.|+|||+++++++.||++.+||-.+
T Consensus       142 ei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGkt  221 (603)
T KOG0318|consen  142 EITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKT  221 (603)
T ss_pred             eeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCC
Confidence            35689999999999   556899999999999999887888888999999999999999999999999999999999999


Q ss_pred             CeEEEeEE--ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          86 WQLEKLFK--KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        86 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      ++.+..+.  .+|.+. |.+++|+||++.+++++.|.+++|||+.+.+....+.....-  .+....+-|. ++.++.+.
T Consensus       222 ge~vg~l~~~~aHkGs-IfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v--~dqqvG~lWq-kd~lItVS  297 (603)
T KOG0318|consen  222 GEKVGELEDSDAHKGS-IFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTV--EDQQVGCLWQ-KDHLITVS  297 (603)
T ss_pred             ccEEEEecCCCCcccc-EEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCch--hceEEEEEEe-CCeEEEEE
Confidence            99999882  388888 999999999999999999999999999999988887766551  2224455565 55566666


Q ss_pred             cCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEe-eeccc-------------
Q psy7482         164 IQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQI-KASAS-------------  227 (327)
Q Consensus       164 ~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~-------------  227 (327)
                      .+|.|.+++.....++..+. |...|+++..+|+ .++++|+.||.|.-|+..++..-+.. +.|..             
T Consensus       298 l~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~  377 (603)
T KOG0318|consen  298 LSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGEL  377 (603)
T ss_pred             cCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcE
Confidence            69999999999999888887 9999999999999 89999999999999998654211000 01111             


Q ss_pred             -------------------------------------------------------------------ceEEEEEEecCCC
Q psy7482         228 -------------------------------------------------------------------RIKGLVFFSIPQE  240 (327)
Q Consensus       228 -------------------------------------------------------------------~v~~~~~~~s~~~  240 (327)
                                                                                         ...++++  +|++
T Consensus       378 ~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv--~~~~  455 (603)
T KOG0318|consen  378 FTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAV--SPDG  455 (603)
T ss_pred             EEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEE--cCCC
Confidence                                                                               1123334  4899


Q ss_pred             cEEEEecCCCeEEEEEcCCCc--eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCc
Q psy7482         241 TTVCTGNEESAITAYNLTDGS--HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCR  316 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~  316 (327)
                      ..++.|+.|+.|++|.+....  ....+..|.++|++++|+|  .+||++...+.+.+||+.+.   +...-....|.++
T Consensus       456 ~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~---~~~~~~w~FHtak  532 (603)
T KOG0318|consen  456 SEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASR---EVKTNRWAFHTAK  532 (603)
T ss_pred             CEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccC---ceecceeeeeeee
Confidence            999999999999999998765  3345678999999999999  99999999999999999998   4555566679999


Q ss_pred             eEEEEeCCCC
Q psy7482         317 FTCLAIRPPV  326 (327)
Q Consensus       317 i~~l~~~p~~  326 (327)
                      |+|++|+|+.
T Consensus       533 I~~~aWsP~n  542 (603)
T KOG0318|consen  533 INCVAWSPNN  542 (603)
T ss_pred             EEEEEeCCCc
Confidence            9999999985

>KOG0265|consensus

Probab=100.00  E-value=4.7e-42  Score=253.90  Aligned_cols=280  Identities=16%  Similarity=0.245  Sum_probs=244.9

Q ss_pred             eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEc-cccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDM-VKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      ...+.||.+.|..+.|  +|..||+|+.|..|.+|+. ...+....+++|.+.|..+.|.+|++.|++++.|.+|+.||.
T Consensus        40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~  119 (338)
T KOG0265|consen   40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDA  119 (338)
T ss_pred             hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEec
Confidence            3456799999999999  9999999999999999995 445666788899999999999999999999999999999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      ++|+....+ +.|... |+.+.-+.-| .++.+++.||++++||+++...++.+.....      ++++.|..++..+.+
T Consensus       120 ~tG~~~rk~-k~h~~~-vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyq------ltAv~f~d~s~qv~s  191 (338)
T KOG0265|consen  120 ETGKRIRKH-KGHTSF-VNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQ------LTAVGFKDTSDQVIS  191 (338)
T ss_pred             ccceeeehh-ccccce-eeecCccccCCeEEEecCCCceEEEEeecccchhhcccccee------EEEEEecccccceee
Confidence            999999999 899988 9988844434 4677888999999999998887766544443      999999999988888


Q ss_pred             ec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc----eeEEeeeccc--c--eEE
Q psy7482         163 PI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS----HLWQIKASAS--R--IKG  231 (327)
Q Consensus       163 ~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~--~--v~~  231 (327)
                      |. |+.|++||++.+.....+. |..+|+.+..+|+ .++.+-+.|.++++||++...    ++..+.+|..  .  ...
T Consensus       192 ggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~  271 (338)
T KOG0265|consen  192 GGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLK  271 (338)
T ss_pred             ccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcce
Confidence            87 9999999999999999998 8999999999998 789999999999999997643    3556665533  3  344


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      ++|  +|++..+.+|+.|..+++||......+..+.+|.+.|.+++|+|  .+|.+++.|.+|++=+
T Consensus       272 csw--sp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge  336 (338)
T KOG0265|consen  272 CSW--SPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE  336 (338)
T ss_pred             eec--cCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence            555  69999999999999999999999999999999999999999999  9999999999998744

>KOG0273|consensus

Probab=100.00  E-value=3.8e-41  Score=263.14  Aligned_cols=273  Identities=15%  Similarity=0.273  Sum_probs=245.4

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      ...|++++|  +|.+||+|+.||.+++|+. +|..+.++..|.++|.++.|+..|++|++++.|+++.+||..+++..+.
T Consensus       235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~  313 (524)
T KOG0273|consen  235 NKDVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQ  313 (524)
T ss_pred             cCCcceEEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEe
Confidence            367999999  7999999999999999995 6888899999999999999999999999999999999999999998888


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEE
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVV  170 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i  170 (327)
                      + ..|... -..+.|-.+ ..+++++.||.|+++.+....+...+..     |.++|.++.|+|.+.+|++++ |++++|
T Consensus       314 f-~~~s~~-~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~G-----H~g~V~alk~n~tg~LLaS~SdD~Tlki  385 (524)
T KOG0273|consen  314 F-EFHSAP-ALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPVKTFIG-----HHGEVNALKWNPTGSLLASCSDDGTLKI  385 (524)
T ss_pred             e-eeccCC-ccceEEecC-ceEeecCCCceEEEEEecCCCcceeeec-----ccCceEEEEECCCCceEEEecCCCeeEe
Confidence            8 666655 577888754 4689999999999999987777555433     456699999999999999998 999999


Q ss_pred             EEecCCceeeEec-CCCceeEEEeecCc----------eEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCC
Q psy7482         171 FSVEKAGVLQTLK-SESKVHSVCFLNET----------TVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQ  239 (327)
Q Consensus       171 ~d~~~~~~~~~~~-~~~~i~~~~~~~~~----------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~  239 (327)
                      |..........+. |...|..+.|+|.+          .+++++.|++|++||+..+.+++.|..|..+|++++|  +|+
T Consensus       386 Ws~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvaf--S~~  463 (524)
T KOG0273|consen  386 WSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAF--SPN  463 (524)
T ss_pred             eecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEe--cCC
Confidence            9998888888887 88899999999852          6889999999999999999999999999999999999  499


Q ss_pred             CcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         240 ETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       240 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      |+++|+|+.||.|.+|+.++++..+.+.+.. .|..++|+.  .+|..+-.||.+++-|+.
T Consensus       464 g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~-~Ifel~Wn~~G~kl~~~~sd~~vcvldlr  523 (524)
T KOG0273|consen  464 GRYLASGSLDGCVHIWSTKTGKLVKSYQGTG-GIFELCWNAAGDKLGACASDGSVCVLDLR  523 (524)
T ss_pred             CcEEEecCCCCeeEeccccchheeEeecCCC-eEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence            9999999999999999999999999988654 699999998  888888899999998875

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.3e-40  Score=268.06  Aligned_cols=278  Identities=21%  Similarity=0.409  Sum_probs=250.2

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      +++|.++|.+++|  ++++|++++.||.+++|++.+++....+..|...+..+.|+|++++|++++.||.|++|++.+++
T Consensus         5 ~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~   84 (289)
T cd00200           5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE   84 (289)
T ss_pred             hcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc
Confidence            3489999999999  77999999999999999999988888888999999999999999999999999999999999887


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      ....+ ..|... +.++.|+++++++++++.+|.+.+||+++++....+..     +...+.++.|+|++.+++++. ++
T Consensus        85 ~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~~~  157 (289)
T cd00200          85 CVRTL-TGHTSY-VSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRG-----HTDWVNSVAFSPDGTFVASSSQDG  157 (289)
T ss_pred             ceEEE-eccCCc-EEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEecc-----CCCcEEEEEEcCcCCEEEEEcCCC
Confidence            77777 667666 99999999988888888899999999987776655542     234599999999999999998 99


Q ss_pred             eEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEE
Q psy7482         167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVC  244 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~  244 (327)
                      .+++||+++++....+. +...+.++.|+|+ ..+++++.++.+++||++.++.+..+..|...+.++.|.  +++.+++
T Consensus       158 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~  235 (289)
T cd00200         158 TIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFS--PDGYLLA  235 (289)
T ss_pred             cEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEc--CCCcEEE
Confidence            99999999888888887 6679999999999 588899999999999999998888888899899999995  7788999


Q ss_pred             EecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         245 TGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       245 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      +++.|+.|++||+.+++.+..+..|...+.+++|++  .+|++++.||.+++|+
T Consensus       236 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~  289 (289)
T cd00200         236 SGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD  289 (289)
T ss_pred             EEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence            888899999999999999999999999999999999  8999999999999996

>KOG0266|consensus

Probab=100.00  E-value=6.7e-41  Score=282.55  Aligned_cols=279  Identities=20%  Similarity=0.362  Sum_probs=247.9

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc-CCCe
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV-GSWQ   87 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~-~~~~   87 (327)
                      |...|.++.|  +|+.+++++.|+.+++|+....+  ..+.+.+|...|.+++|+|+++++++++.|++|++||+ ..+.
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~  237 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGR  237 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCe
Confidence            4788999999  99999999999999999998877  77888899999999999999999999999999999999 5558


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      .++++ .+|... |++++|+|+++++++|+.|++|++||++++++...+..+.     +.|.+++|+++++++++++ |+
T Consensus       238 ~~~~l-~gH~~~-v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs-----~~is~~~f~~d~~~l~s~s~d~  310 (456)
T KOG0266|consen  238 NLKTL-KGHSTY-VTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHS-----DGISGLAFSPDGNLLVSASYDG  310 (456)
T ss_pred             EEEEe-cCCCCc-eEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccC-----CceEEEEECCCCCEEEEcCCCc
Confidence            88888 799998 9999999999999999999999999999988877665554     3599999999999999998 99


Q ss_pred             eEEEEEecCCc--eeeEec-CCC--ceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEE-EEEecCC
Q psy7482         167 KAVVFSVEKAG--VLQTLK-SES--KVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL-VFFSIPQ  239 (327)
Q Consensus       167 ~i~i~d~~~~~--~~~~~~-~~~--~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~-~~~~s~~  239 (327)
                      .|++||+.++.  +...+. +..  ++++++|+|+ .++++++.|+.+++||+..+..+..+.+|...+.++ .+..++.
T Consensus       311 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (456)
T KOG0266|consen  311 TIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTG  390 (456)
T ss_pred             cEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCC
Confidence            99999999999  445555 222  6899999999 899999999999999999999999999988754333 1111489


Q ss_pred             CcEEEEecCCCeEEEEEcCCCceeEEeecc-cCceEEEeeeC--cEEEEEe--cCCcEEEEEcc
Q psy7482         240 ETTVCTGNEESAITAYNLTDGSHLWHIKAS-ASRIKGLASHR--NHLICIT--SAGDLVVWELN  298 (327)
Q Consensus       240 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~--~~l~~~~--~dg~v~iw~~~  298 (327)
                      +.++++|+.|+.|++||+.++..+..+.+| ...+..+.+++  +++++++  .|+.+++|..+
T Consensus       391 ~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  391 GKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             CCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            999999999999999999999999999999 88999999999  8888888  68889999865

>KOG0296|consensus

Probab=100.00  E-value=6.8e-41  Score=253.93  Aligned_cols=279  Identities=16%  Similarity=0.281  Sum_probs=240.4

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      .+..|+++|.+++.  +.++++||+.|..-.||++.+++....+.+|...|+++.|+.+|.+||+|+-+|.|+||+..++
T Consensus        59 tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg  138 (399)
T KOG0296|consen   59 TFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTG  138 (399)
T ss_pred             ehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccC
Confidence            45589999999999  7889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q  165 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~  165 (327)
                      .....+ ...... +.-+.|+|.+..|++|+.||.+-+|.+.++...+.+.-     |..++++-.|.|+|+.++++. |
T Consensus       139 ~~~~~~-~~e~~d-ieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~G-----h~~~ct~G~f~pdGKr~~tgy~d  211 (399)
T KOG0296|consen  139 GEQWKL-DQEVED-IEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSG-----HNSPCTCGEFIPDGKRILTGYDD  211 (399)
T ss_pred             ceEEEe-ecccCc-eEEEEecccccEEEeecCCCcEEEEECCCcceeeEecC-----CCCCcccccccCCCceEEEEecC
Confidence            888887 444444 88899999999999999999999999988655444433     345699999999999999997 9


Q ss_pred             CeEEEEEecCCceeeEecC----------------------------------------------------CCceeEEEe
Q psy7482         166 NKAVVFSVEKAGVLQTLKS----------------------------------------------------ESKVHSVCF  193 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~~~----------------------------------------------------~~~i~~~~~  193 (327)
                      |+|++|+..+++++..+..                                                    ...+.++.+
T Consensus       212 gti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~  291 (399)
T KOG0296|consen  212 GTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVES  291 (399)
T ss_pred             ceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhh
Confidence            9999999999887665430                                                    011222223


Q ss_pred             ec---C-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482         194 LN---E-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       194 ~~---~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                      .|   . .+.++|+.||+|.|||+...+..+.+ .|..+|..+.|.  + ..+|++++.+|.|+.||.++|+++.++.+|
T Consensus       292 ~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c-~he~~V~~l~w~--~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH  367 (399)
T KOG0296|consen  292 IPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC-EHEDGVTKLKWL--N-TDYLLTACANGKVRQWDARTGQLKFTYTGH  367 (399)
T ss_pred             cccccccchhhcccccceEEEEecccchhheec-cCCCceEEEEEc--C-cchheeeccCceEEeeeccccceEEEEecC
Confidence            22   3 57889999999999999877655444 588889999994  4 899999999999999999999999999999


Q ss_pred             cCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         270 ASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       270 ~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      ...|.+++.+|  ++++|+|.|++.+||+++
T Consensus       368 ~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  368 QMGILDFALSPQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             chheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence            99999999999  999999999999999875

>KOG0645|consensus

Probab=100.00  E-value=3.5e-40  Score=240.71  Aligned_cols=284  Identities=19%  Similarity=0.293  Sum_probs=233.3

Q ss_pred             eEEEeeeeccCCccEEEEEe-C--CCEEEEecCCCeEEEEEccc---cccccccc-cccccEEEEEECCCCCeEEEecCC
Q psy7482           3 TLTQTFVTHSHTASVRSVAA-T--SKLAASSGADETVVLYDMVK---RKQSGALM-QHEGTITCLKFTPEGSHLISCSDD   75 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~-~--~~~l~~~~~dg~v~~w~~~~---~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d   75 (327)
                      ++.....+++|.+++..++| .  |..||+++.|..|++|+...   -.+...+. +|+..|.+++|+|.|++|++|+.|
T Consensus         3 ~l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD   82 (312)
T KOG0645|consen    3 RLILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFD   82 (312)
T ss_pred             cceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeecc
Confidence            45666777899999999999 2  45899999999999999874   23443443 699999999999999999999999


Q ss_pred             CcEEEEEcCC--CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482          76 GSIAIFRVGS--WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW  153 (327)
Q Consensus        76 ~~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  153 (327)
                      .++.||.-..  .+++..+ .+|... |.+++|+++|.+||++++|..|-+|.+..+........-  ..|...|..+.|
T Consensus        83 ~t~~Iw~k~~~efecv~~l-EGHEnE-VK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL--~~HtqDVK~V~W  158 (312)
T KOG0645|consen   83 ATVVIWKKEDGEFECVATL-EGHENE-VKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVL--QEHTQDVKHVIW  158 (312)
T ss_pred             ceEEEeecCCCceeEEeee-eccccc-eeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeee--ccccccccEEEE
Confidence            9999998754  4667778 899988 999999999999999999999999999865443332221  223455999999


Q ss_pred             ccCCcEEEeec-CCeEEEEEecC---CceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeeccc
Q psy7482         154 SPEGLLYAIPI-QNKAVVFSVEK---AGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASAS  227 (327)
Q Consensus       154 ~~~~~~l~~~~-~~~i~i~d~~~---~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  227 (327)
                      +|...+|++++ |++|++|+-..   -++..++. |...+.+++|+|. ..|++++.|++++||.....-    -..|+.
T Consensus       159 HPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~----~~~~sr  234 (312)
T KOG0645|consen  159 HPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL----SGMHSR  234 (312)
T ss_pred             cCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc----chhccc
Confidence            99999999998 99999998763   34677777 7779999999998 699999999999999865321    134778


Q ss_pred             ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc------e-eEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEc
Q psy7482         228 RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS------H-LWHIKASASRIKGLASHR---NHLICITSAGDLVVWEL  297 (327)
Q Consensus       228 ~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~------~-~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~  297 (327)
                      +++.+.|   . ...|++++.|+.|++|.-...-      . ...-..|...|++++|.|   ++|++++.||.|++|.+
T Consensus       235 ~~Y~v~W---~-~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l  310 (312)
T KOG0645|consen  235 ALYDVPW---D-NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWEL  310 (312)
T ss_pred             ceEeeee---c-ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEe
Confidence            8999999   3 6789999999999999865431      1 123457888999999999   89999999999999987


Q ss_pred             c
Q psy7482         298 N  298 (327)
Q Consensus       298 ~  298 (327)
                      .
T Consensus       311 ~  311 (312)
T KOG0645|consen  311 E  311 (312)
T ss_pred             c
Confidence            5

>KOG0284|consensus

Probab=100.00  E-value=5.5e-43  Score=268.83  Aligned_cols=261  Identities=17%  Similarity=0.315  Sum_probs=231.5

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      -..+|..+.|.|+|+.|++|+..|.+.+|+..+......+ ..|... |.++.|++++.++++|+.+|.|++|+......
T Consensus        95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtil-QaHDs~-Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnV  172 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETIL-QAHDSP-VRTMKWSHNGTWMISGDKGGMIKYWQPNMNNV  172 (464)
T ss_pred             cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHh-hhhccc-ceeEEEccCCCEEEEcCCCceEEecccchhhh
Confidence            3457999999999999999999999999998665554455 788887 99999999999999999999999999865443


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEE
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAIT  209 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~  209 (327)
                      ....     ..+...|++++|+|+...|++++ ||.|+|||....+....+. |.-.|.++.|+|. +++++|+.|..|+
T Consensus       173 k~~~-----ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVK  247 (464)
T KOG0284|consen  173 KIIQ-----AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVK  247 (464)
T ss_pred             HHhh-----HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeE
Confidence            2211     12235599999999888888887 9999999999888888887 8889999999998 9999999999999


Q ss_pred             EEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEE
Q psy7482         210 AYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICI  286 (327)
Q Consensus       210 i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~  286 (327)
                      +||.++++++.++..|+..|..+.|.  +++.+|+++|.|..++++|+++.+.+..+++|...++++.|+|   .+|.+|
T Consensus       248 lWDprSg~cl~tlh~HKntVl~~~f~--~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsg  325 (464)
T KOG0284|consen  248 LWDPRSGSCLATLHGHKNTVLAVKFN--PNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSG  325 (464)
T ss_pred             eecCCCcchhhhhhhccceEEEEEEc--CCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeec
Confidence            99999999999999999999999995  8999999999999999999999999999999999999999999   999999


Q ss_pred             ecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         287 TSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       287 ~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +.||.|..|.+...   ++.......|...|.+|+|+|-
T Consensus       326 g~Dgsvvh~~v~~~---~p~~~i~~AHd~~iwsl~~hPl  361 (464)
T KOG0284|consen  326 GSDGSVVHWVVGLE---EPLGEIPPAHDGEIWSLAYHPL  361 (464)
T ss_pred             cCCCceEEEecccc---ccccCCCcccccceeeeecccc
Confidence            99999999999855   5566666778899999999993

>KOG0294|consensus

Probab=100.00  E-value=1.4e-40  Score=247.72  Aligned_cols=252  Identities=39%  Similarity=0.656  Sum_probs=235.7

Q ss_pred             CeeEEEeeeeccCCccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCC--eEEEecCCCcE
Q psy7482           1 KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS--HLISCSDDGSI   78 (327)
Q Consensus         1 ~~~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i   78 (327)
                      ++++.+.|.++.|.++|++++.++.++|+|+.|.+|+|||+.+...+..+..|.+.|+++.|.++-.  .|++|+.||.|
T Consensus        30 ~~~l~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i  109 (362)
T KOG0294|consen   30 KPTLKPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHI  109 (362)
T ss_pred             ceeeeccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcE
Confidence            4688999999999999999999999999999999999999999999999999999999999998764  89999999999


Q ss_pred             EEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc
Q psy7482          79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL  158 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  158 (327)
                      .+|+...++++..+ ++|.+. |+.++.+|.+++-++.+.|+.++.||+-+|+.....++...      ...+.|+|.|.
T Consensus       110 ~iw~~~~W~~~~sl-K~H~~~-Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~------at~v~w~~~Gd  181 (362)
T KOG0294|consen  110 IIWRVGSWELLKSL-KAHKGQ-VTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNK------ATLVSWSPQGD  181 (362)
T ss_pred             EEEEcCCeEEeeee-cccccc-cceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCc------ceeeEEcCCCC
Confidence            99999999999999 999999 99999999999999999999999999999998888888776      56699999999


Q ss_pred             EEEeecCCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecC
Q psy7482         159 LYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIP  238 (327)
Q Consensus       159 ~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~  238 (327)
                      +++.+..+.|-+|.+.+.+....+..+..+.++.|...+.+++|..++.|.+||..+..+...+.+|..+|.++.+...|
T Consensus       182 ~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~  261 (362)
T KOG0294|consen  182 HFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNP  261 (362)
T ss_pred             EEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecC
Confidence            99999999999999998888888877788899999888999999999999999999999999999999999999977678


Q ss_pred             CCcEEEEecCCCeEEEEEcCCC
Q psy7482         239 QETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       239 ~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                      ++.+|++++.||.|++||++..
T Consensus       262 ~~~~lvTaSSDG~I~vWd~~~~  283 (362)
T KOG0294|consen  262 EHEYLVTASSDGFIKVWDIDME  283 (362)
T ss_pred             CceEEEEeccCceEEEEEcccc
Confidence            9999999999999999999765

>KOG0315|consensus

Probab=100.00  E-value=8.2e-40  Score=236.13  Aligned_cols=257  Identities=15%  Similarity=0.275  Sum_probs=221.0

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      ..+.|+.+..  +++.||+|+ ...||+||+.++.  ++.++.+|...|+++.|..+|+.+++|++||+++|||++...+
T Consensus        39 ~dsqVNrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~  117 (311)
T KOG0315|consen   39 PDSQVNRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSC  117 (311)
T ss_pred             CccceeeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCccc
Confidence            3467888888  888999888 4569999999875  5788999999999999999999999999999999999999777


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCe
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNK  167 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~  167 (327)
                      .+.+  .+... |+++..+|+...|++|..+|.|++||+.+..+........    ..++.++...|||..++++. .|.
T Consensus       118 qR~~--~~~sp-Vn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~----~~~i~sl~v~~dgsml~a~nnkG~  190 (311)
T KOG0315|consen  118 QRNY--QHNSP-VNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPED----DTSIQSLTVMPDGSMLAAANNKGN  190 (311)
T ss_pred             chhc--cCCCC-cceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCC----CcceeeEEEcCCCcEEEEecCCcc
Confidence            6666  34444 9999999999999999999999999998875544332222    23499999999999999987 899


Q ss_pred             EEEEEecCCc------eeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC-ceeEEeeecccceEEEEEEecC
Q psy7482         168 AVVFSVEKAG------VLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG-SHLWQIKASASRIKGLVFFSIP  238 (327)
Q Consensus       168 i~i~d~~~~~------~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~s~  238 (327)
                      .++|++-...      ++..++ |.+.+..+.+||| ++|++++.|.+++||+.++. +....+++|...+...+|+  .
T Consensus       191 cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS--~  268 (311)
T KOG0315|consen  191 CYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFS--A  268 (311)
T ss_pred             EEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeec--c
Confidence            9999987643      444555 8889999999999 89999999999999999887 5566778999999999994  8


Q ss_pred             CCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeee
Q psy7482         239 QETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASH  279 (327)
Q Consensus       239 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  279 (327)
                      +|+||++|+.|+.+++|++..++.+..+.+|.....+++..
T Consensus       269 dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  269 DGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             CccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence            99999999999999999999999999999998877776643

>KOG0291|consensus

Probab=100.00  E-value=4.7e-39  Score=264.90  Aligned_cols=288  Identities=16%  Similarity=0.299  Sum_probs=250.4

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecCC-CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcE
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGAD-ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI   78 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~d-g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i   78 (327)
                      |++.+.+..  -..+|..++|  .|..||.|+.. |.+-||+.++..-+...++|...+++++++|||+++|+|+.||.|
T Consensus       297 f~lih~LSi--s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKV  374 (893)
T KOG0291|consen  297 FNLIHSLSI--SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKV  374 (893)
T ss_pred             ceEEEEeec--ccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcE
Confidence            345555553  4567889999  59999988755 899999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc
Q psy7482          79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL  158 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  158 (327)
                      +|||..++-+..++ ..|... |+.+.|+..++.+++++.||+|+.||+...+.-..+..+..    -...|++..|.|.
T Consensus       375 KvWn~~SgfC~vTF-teHts~-Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p----~QfscvavD~sGe  448 (893)
T KOG0291|consen  375 KVWNTQSGFCFVTF-TEHTSG-VTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEP----IQFSCVAVDPSGE  448 (893)
T ss_pred             EEEeccCceEEEEe-ccCCCc-eEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCc----eeeeEEEEcCCCC
Confidence            99999999999999 899998 99999999999999999999999999999888777766654    2378999999999


Q ss_pred             EEEeec-C-CeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc-eeEEeeecccceEEEE
Q psy7482         159 LYAIPI-Q-NKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS-HLWQIKASASRIKGLV  233 (327)
Q Consensus       159 ~l~~~~-~-~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~  233 (327)
                      ++.+|. | -.|.+|++++|+.+..+. |+++|.+++|+|+ ..|++++.|.+|++||+-... .+.+++ +...+..++
T Consensus       449 lV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vs  527 (893)
T KOG0291|consen  449 LVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVS  527 (893)
T ss_pred             EEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEE
Confidence            999997 4 479999999999999998 9999999999998 899999999999999986553 344444 556799999


Q ss_pred             EEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec--------------------ccCceEEEeeeC--cEEEEEecCCc
Q psy7482         234 FFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA--------------------SASRIKGLASHR--NHLICITSAGD  291 (327)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------------------~~~~v~~~~~~~--~~l~~~~~dg~  291 (327)
                      |.  |+|+.|+++..||.|.+||...+..+..+.+                    .....+.+++++  ..|++|+..+.
T Consensus       528 fr--PdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~  605 (893)
T KOG0291|consen  528 FR--PDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNS  605 (893)
T ss_pred             Ec--CCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCccc
Confidence            95  9999999999999999999987765544332                    124688899998  99999999999


Q ss_pred             EEEEEccCc
Q psy7482         292 LVVWELNED  300 (327)
Q Consensus       292 v~iw~~~~~  300 (327)
                      |++|++.++
T Consensus       606 iCiY~v~~~  614 (893)
T KOG0291|consen  606 ICIYDVPEG  614 (893)
T ss_pred             EEEEECchh
Confidence            999999886

>KOG0319|consensus

Probab=100.00  E-value=2.9e-40  Score=271.28  Aligned_cols=286  Identities=16%  Similarity=0.246  Sum_probs=249.5

Q ss_pred             eccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482          10 THSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        10 ~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      +-|..+.|..|+|   +.++||.++..+.+|+|+..+..+. .+.+|++.|.++....+|.+|++|+.|.++++|.++++
T Consensus       319 ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~  397 (775)
T KOG0319|consen  319 IVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNN  397 (775)
T ss_pred             hcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCC
Confidence            3488899999999   6689999999999999998877665 88899999999996667889999999999999988543


Q ss_pred             e----EEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeee-eec--c-ccCccccceEEEEEccCC
Q psy7482          87 Q----LEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYI-TNL--S-SYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        87 ~----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~-~~~--~-~~~~~~~~v~~~~~~~~~  157 (327)
                      .    ++... .+|.+. |.+++++..+ .+|++++.|+++++|++...+.... ..+  . ....|...|++++.+|+.
T Consensus       398 ~~~~~~~a~~-~gH~~s-vgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~nd  475 (775)
T KOG0319|consen  398 CSKSLCVAQA-NGHTNS-VGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPND  475 (775)
T ss_pred             cchhhhhhhh-cccccc-cceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCC
Confidence            3    23334 788888 9999997744 6899999999999999976322211 111  0 113455669999999999


Q ss_pred             cEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482         158 LLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF  234 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  234 (327)
                      +++|+|+ |.+.++|+++.......+. |...+.++.|+|. ..+++++.|++|+||.+.+..+++++.+|...|..+.|
T Consensus       476 kLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F  555 (775)
T KOG0319|consen  476 KLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASF  555 (775)
T ss_pred             ceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeee
Confidence            9999999 9999999999999999998 9999999999997 89999999999999999999999999999999999999


Q ss_pred             EecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         235 FSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .  .+|+.|++++.||.|++|++++++++.++.+|++.|++++.++  .+++||+.||.|.+|.=.+.
T Consensus       556 ~--~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~Te  621 (775)
T KOG0319|consen  556 I--RNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVTE  621 (775)
T ss_pred             e--eCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecCcH
Confidence            7  7999999999999999999999999999999999999999999  89999999999999975443

>KOG0319|consensus

Probab=100.00  E-value=1.2e-39  Score=267.68  Aligned_cols=310  Identities=17%  Similarity=0.254  Sum_probs=254.3

Q ss_pred             eeeccCCccEEEEEe----CCCEEEEecCCCeEEEEEccccc-cccccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482           8 FVTHSHTASVRSVAA----TSKLAASSGADETVVLYDMVKRK-QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~----~~~~l~~~~~dg~v~~w~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      ..++||.+.|.++.|    ...+|++|..|+++++||+.+.. ++..+..|.+.|++++|++|+..+++++.|..+.+||
T Consensus       141 h~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd  220 (775)
T KOG0319|consen  141 HSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWD  220 (775)
T ss_pred             EEecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEee
Confidence            355699999999999    34568999999999999999654 4888999999999999999999999999999999998


Q ss_pred             cCCCeEEEeEE---------------------------------------------------------------------
Q psy7482          83 VGSWQLEKLFK---------------------------------------------------------------------   93 (327)
Q Consensus        83 ~~~~~~~~~~~---------------------------------------------------------------------   93 (327)
                      +.+.+...+++                                                                     
T Consensus       221 ~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vt  300 (775)
T KOG0319|consen  221 LVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVT  300 (775)
T ss_pred             hhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEE
Confidence            74211111100                                                                     


Q ss_pred             -------------------------------------------------------------ecccCCceeeEEEecCCCE
Q psy7482          94 -------------------------------------------------------------KAHKGTAVNHISIHPSGKL  112 (327)
Q Consensus        94 -------------------------------------------------------------~~~~~~~v~~~~~~~~~~~  112 (327)
                                                                                   .+|.+. |.+++...+|.+
T Consensus       301 aeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~-vlSL~~~~~g~l  379 (775)
T KOG0319|consen  301 AEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEA-VLSLDVWSSGDL  379 (775)
T ss_pred             ccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhh-eeeeeecccCcE
Confidence                                                                         466666 777775556779


Q ss_pred             EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecCCcee---eEe-----
Q psy7482         113 ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVL---QTL-----  182 (327)
Q Consensus       113 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~---~~~-----  182 (327)
                      |++|+.|.++++|.++++.. ..........|...|.+++++..+ .+|++++ |.++++|++...+..   ..+     
T Consensus       380 lat~sKD~svilWr~~~~~~-~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t  458 (775)
T KOG0319|consen  380 LATGSKDKSVILWRLNNNCS-KSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYT  458 (775)
T ss_pred             EEEecCCceEEEEEecCCcc-hhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHH
Confidence            99999999999998854332 222233445566779999997765 5777776 999999999763211   111     


Q ss_pred             --cCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         183 --KSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       183 --~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                        .|...|++++++|+ .++++|+.|.+.++|++++...+.++.+|...+.++.|+  |..+.++++|.|++|+||.+.+
T Consensus       459 ~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs--~~dq~laT~SgD~TvKIW~is~  536 (775)
T KOG0319|consen  459 ERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFS--KNDQLLATCSGDKTVKIWSIST  536 (775)
T ss_pred             HHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEec--cccceeEeccCCceEEEEEecc
Confidence              28899999999998 899999999999999999999999999999999999995  8999999999999999999999


Q ss_pred             CceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         260 GSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       260 ~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ..++.++.+|...|....|-.  ..|++++.||.+++|++.+..  -.  .....|..+|.+++-+|+
T Consensus       537 fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~e--C~--~tlD~H~DrvWaL~~~~~  600 (775)
T KOG0319|consen  537 FSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNE--CE--MTLDAHNDRVWALSVSPL  600 (775)
T ss_pred             ceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchh--hh--hhhhhccceeEEEeecCc
Confidence            999999999999999999987  999999999999999999983  11  223457788988888775

>KOG0291|consensus

Probab=100.00  E-value=3.1e-38  Score=260.09  Aligned_cols=304  Identities=14%  Similarity=0.226  Sum_probs=257.6

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccccc--ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      ..||...|.++.|  |.++|++|+.|-++++|++...+.  ...+.+|.+.|.++-|..+...+++.+.||.+.+|....
T Consensus       141 ~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~  220 (893)
T KOG0291|consen  141 YLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDL  220 (893)
T ss_pred             ecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecC
Confidence            3489999999999  899999999999999999987766  566789999999999999999999999999999997651


Q ss_pred             -----------------------CeE---------E-EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          86 -----------------------WQL---------E-KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        86 -----------------------~~~---------~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                                             ++.         . +.+ .......+++.+|++..+.|++|-..|...+|++..-..
T Consensus       221 ~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~-ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~l  299 (893)
T KOG0291|consen  221 RPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHY-LNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNL  299 (893)
T ss_pred             CCcccccccccccccccccccccchhhhcceEEEEEEeee-ecccccceeeeeccCCceEEEEEecCCeeEEEecCCceE
Confidence                                   111         0 111 111223499999999999999999999999999998888


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcE
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAI  208 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i  208 (327)
                      +........     +|..++|+..|..+|.|+  -|.+.+|+.++...+...+ |...+++++++|| +++++|+.||.|
T Consensus       300 ih~LSis~~-----~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKV  374 (893)
T KOG0291|consen  300 IHSLSISDQ-----KILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKV  374 (893)
T ss_pred             EEEeecccc-----eeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcE
Confidence            887776644     399999999999999997  4799999999887766665 8899999999999 889999999999


Q ss_pred             EEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC------------------------------
Q psy7482         209 TAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT------------------------------  258 (327)
Q Consensus       209 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~------------------------------  258 (327)
                      ++||..++-+..+|..|...|+.+.|.  ..|+.+++++.||+|+.||+.                              
T Consensus       375 KvWn~~SgfC~vTFteHts~Vt~v~f~--~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~A  452 (893)
T KOG0291|consen  375 KVWNTQSGFCFVTFTEHTSGVTAVQFT--ARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCA  452 (893)
T ss_pred             EEEeccCceEEEEeccCCCceEEEEEE--ecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEe
Confidence            999999999999999999999999996  788888888888888888764                              


Q ss_pred             --------------CCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEe
Q psy7482         259 --------------DGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAI  322 (327)
Q Consensus       259 --------------~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~  322 (327)
                                    +|+++..+.+|++||.+++|+|  ..|+++|.|.+||+|++-...    ...........++.++|
T Consensus       453 G~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~----~~vEtl~i~sdvl~vsf  528 (893)
T KOG0291|consen  453 GAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSS----GTVETLEIRSDVLAVSF  528 (893)
T ss_pred             eccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccC----ceeeeEeeccceeEEEE
Confidence                          3556667789999999999999  999999999999999997652    33344455566999999


Q ss_pred             CCC
Q psy7482         323 RPP  325 (327)
Q Consensus       323 ~p~  325 (327)
                      +|+
T Consensus       529 rPd  531 (893)
T KOG0291|consen  529 RPD  531 (893)
T ss_pred             cCC
Confidence            997

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.9e-38  Score=286.55  Aligned_cols=276  Identities=15%  Similarity=0.237  Sum_probs=231.5

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc--------cccccccccccEEEEEECC-CCCeEEEecCCCcEE
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--------QSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIA   79 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~   79 (327)
                      .+|.+.|.+++|  ++++||+|+.|+.|+|||.....        +...+. +...+.+++|+| ++.+|++++.||+|+
T Consensus       480 ~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~  558 (793)
T PLN00181        480 LNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQ  558 (793)
T ss_pred             cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEE
Confidence            459999999999  89999999999999999975421        112222 346799999987 478999999999999


Q ss_pred             EEEcCCCeEEEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc-cCC
Q psy7482          80 IFRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS-PEG  157 (327)
Q Consensus        80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~  157 (327)
                      +||+.+++.+..+ .+|.+. |++++|+| ++.+|++|+.||.|++||++++.....+....      .+.++.|+ +++
T Consensus       559 lWd~~~~~~~~~~-~~H~~~-V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~------~v~~v~~~~~~g  630 (793)
T PLN00181        559 VWDVARSQLVTEM-KEHEKR-VWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA------NICCVQFPSESG  630 (793)
T ss_pred             EEECCCCeEEEEe-cCCCCC-EEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCC------CeEEEEEeCCCC
Confidence            9999999988888 788887 99999997 78899999999999999999888766554332      38899995 578


Q ss_pred             cEEEeec-CCeEEEEEecCCc-eeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCC------CceeEEeeecccc
Q psy7482         158 LLYAIPI-QNKAVVFSVEKAG-VLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTD------GSHLWQIKASASR  228 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~~-~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~  228 (327)
                      .++++|+ |+.|++||+++.+ ....+. |...|.++.|.+...+++++.|+.|++||++.      .+++..+.+|...
T Consensus       631 ~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~  710 (793)
T PLN00181        631 RSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNV  710 (793)
T ss_pred             CEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCC
Confidence            8999887 9999999998765 344554 88899999998668999999999999999974      3567888999999


Q ss_pred             eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe-------------ecccCceEEEeeeC--cEEEEEecCCcEE
Q psy7482         229 IKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI-------------KASASRIKGLASHR--NHLICITSAGDLV  293 (327)
Q Consensus       229 v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-------------~~~~~~v~~~~~~~--~~l~~~~~dg~v~  293 (327)
                      +..++|.  +++.+|++|+.|+.|++|+.....++..+             ..+...|.+++|+|  ..|++|+.||.|+
T Consensus       711 i~~v~~s--~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~  788 (793)
T PLN00181        711 KNFVGLS--VSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIK  788 (793)
T ss_pred             eeEEEEc--CCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEE
Confidence            9999994  88999999999999999998766544322             23456799999999  8999999999999


Q ss_pred             EEEc
Q psy7482         294 VWEL  297 (327)
Q Consensus       294 iw~~  297 (327)
                      ||++
T Consensus       789 i~~~  792 (793)
T PLN00181        789 ILEM  792 (793)
T ss_pred             EEec
Confidence            9996

>KOG0263|consensus

Probab=100.00  E-value=3.4e-40  Score=272.96  Aligned_cols=242  Identities=21%  Similarity=0.371  Sum_probs=219.5

Q ss_pred             cccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC-------------------------------eEEEeEEecccC
Q psy7482          50 LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-------------------------------QLEKLFKKAHKG   98 (327)
Q Consensus        50 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-------------------------------~~~~~~~~~~~~   98 (327)
                      +..-...++|..|++|+.+||.|..|..|++|.+...                               .....+ .+|.+
T Consensus       374 ~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L-~GH~G  452 (707)
T KOG0263|consen  374 FHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTL-YGHSG  452 (707)
T ss_pred             EEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEe-ecCCC
Confidence            3334567999999999999999999999999987621                               112334 78888


Q ss_pred             CceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCc
Q psy7482          99 TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAG  177 (327)
Q Consensus        99 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~  177 (327)
                      + |....|+|+.++|+++++|+++++|.+.+..+...+.     .|..||..+.|+|.|-++|+++ |++.++|.....+
T Consensus       453 P-Vyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~-----GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~  526 (707)
T KOG0263|consen  453 P-VYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYK-----GHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNK  526 (707)
T ss_pred             c-eeeeeecccccceeeccCCcceeeeecccceeEEEec-----CCCcceeeEEecCCceEEEecCCCceeeeeecccCC
Confidence            7 9999999999999999999999999999988866654     3355699999999999999998 9999999999999


Q ss_pred             eeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEE
Q psy7482         178 VLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAY  255 (327)
Q Consensus       178 ~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~  255 (327)
                      +++.+. |.+.+.|+.|+|+ .++++|+.|.++++||+.+|..++.|.+|.++|.+++|+  |+|++|++|+.||.|.+|
T Consensus       527 PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~S--p~Gr~LaSg~ed~~I~iW  604 (707)
T KOG0263|consen  527 PLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFS--PCGRYLASGDEDGLIKIW  604 (707)
T ss_pred             chhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEc--CCCceEeecccCCcEEEE
Confidence            988888 8899999999999 999999999999999999999999999999999999994  999999999999999999


Q ss_pred             EcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         256 NLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       256 d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      |+.+++++..+.+|.+.|.++.|+.  ..||+|+.|.+|++||+...
T Consensus       605 Dl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~  651 (707)
T KOG0263|consen  605 DLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV  651 (707)
T ss_pred             EcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence            9999999999999999999999999  99999999999999998765

>KOG0263|consensus

Probab=100.00  E-value=1.6e-39  Score=269.06  Aligned_cols=239  Identities=21%  Similarity=0.400  Sum_probs=215.3

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccc-------------------------------cccccccccccEEE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-------------------------------QSGALMQHEGTITC   59 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~-------------------------------~~~~~~~~~~~v~~   59 (327)
                      -...++|..|  ++.+||.|-.|..|++|.+...+                               ...++.+|.++|..
T Consensus       377 t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg  456 (707)
T KOG0263|consen  377 TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG  456 (707)
T ss_pred             cCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence            3456889999  78899999999999999886321                               12346789999999


Q ss_pred             EEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc
Q psy7482          60 LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS  139 (327)
Q Consensus        60 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  139 (327)
                      +.|+|+.++|++++.|+++++|.+.+....-.+ .+|..+ |+.+.|+|.|-++++++.|++-++|......+...+   
T Consensus       457 ~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y-~GH~~P-VwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRif---  531 (707)
T KOG0263|consen  457 CSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIY-KGHLAP-VWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIF---  531 (707)
T ss_pred             eeecccccceeeccCCcceeeeecccceeEEEe-cCCCcc-eeeEEecCCceEEEecCCCceeeeeecccCCchhhh---
Confidence            999999999999999999999999999999998 788887 999999999999999999999999998876654444   


Q ss_pred             ccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC
Q psy7482         140 SYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG  216 (327)
Q Consensus       140 ~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~  216 (327)
                        ..|...+.|+.|+|+..++++|+ |.++++||+.+|..++.|. |.++|.+++|+|+ .+|++|+.||.|.+||+.++
T Consensus       532 --aghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~  609 (707)
T KOG0263|consen  532 --AGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG  609 (707)
T ss_pred             --cccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC
Confidence              33345599999999999999998 9999999999999999998 9999999999999 78999999999999999999


Q ss_pred             ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482         217 SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                      +.+..+.+|.+.|.++.|+  .+|..|++|+.|++|++||+...
T Consensus       610 ~~v~~l~~Ht~ti~SlsFS--~dg~vLasgg~DnsV~lWD~~~~  651 (707)
T KOG0263|consen  610 SLVKQLKGHTGTIYSLSFS--RDGNVLASGGADNSVRLWDLTKV  651 (707)
T ss_pred             cchhhhhcccCceeEEEEe--cCCCEEEecCCCCeEEEEEchhh
Confidence            9999999999999999995  99999999999999999998643

>KOG0295|consensus

Probab=100.00  E-value=2.4e-39  Score=245.47  Aligned_cols=269  Identities=16%  Similarity=0.259  Sum_probs=235.8

Q ss_pred             cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEE
Q psy7482          46 QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW  125 (327)
Q Consensus        46 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  125 (327)
                      +.+.+.+|..+|+.+.|+|+-..+++++.|++|++||..+++....+ .+|.+. +..+.|+..|+++++++.|-.+++|
T Consensus       100 l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~L-rGHt~s-v~di~~~a~Gk~l~tcSsDl~~~LW  177 (406)
T KOG0295|consen  100 LVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSL-RGHTDS-VFDISFDASGKYLATCSSDLSAKLW  177 (406)
T ss_pred             chhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhh-hccccc-eeEEEEecCccEEEecCCccchhhe
Confidence            34556789999999999999999999999999999999999998888 999999 9999999999999999999999999


Q ss_pred             EcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEE
Q psy7482         126 NLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCT  201 (327)
Q Consensus       126 d~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~  201 (327)
                      |..+. ++......+     ...|.++.|-|.|.++++++ |.+|+.|++.++.++.++. |...+..+..+.| ..+++
T Consensus       178 d~~~~~~c~ks~~gh-----~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As  252 (406)
T KOG0295|consen  178 DFDTFFRCIKSLIGH-----EHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIAS  252 (406)
T ss_pred             eHHHHHHHHHHhcCc-----ccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEe
Confidence            98763 222222222     23399999999999999998 9999999999999999999 8889999999999 67889


Q ss_pred             eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEe-------------cCCCcEEEEecCCCeEEEEEcCCCceeEEeec
Q psy7482         202 GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFS-------------IPQETTVCTGNEESAITAYNLTDGSHLWHIKA  268 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-------------s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  268 (327)
                      ++.|.++++|-+.++++...++.|+.+|.+++|.|             ...+.++.+++.|++|++||+.++.++.++.+
T Consensus       253 ~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g  332 (406)
T KOG0295|consen  253 CSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG  332 (406)
T ss_pred             cCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec
Confidence            99999999999999999999999999999999975             01246999999999999999999999999999


Q ss_pred             ccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         269 SASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       269 ~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      |.+.|.+++|+|  ++|+++.+|+++++||++...  ..  .....|..-+++++|+.+
T Consensus       333 hdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~--cm--k~~~ah~hfvt~lDfh~~  387 (406)
T KOG0295|consen  333 HDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQ--CM--KTLEAHEHFVTSLDFHKT  387 (406)
T ss_pred             ccceeeeeEEcCCCeEEEEEecCCcEEEEEeccce--ee--eccCCCcceeEEEecCCC
Confidence            999999999999  999999999999999999983  22  222356667999999865

>KOG0313|consensus

Probab=100.00  E-value=9.5e-39  Score=243.48  Aligned_cols=284  Identities=17%  Similarity=0.279  Sum_probs=240.2

Q ss_pred             cCCccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCC---CeEEEecCCCcEEEEEcCCCeE
Q psy7482          12 SHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG---SHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        12 ~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      -|.+.|.++...++.+++|+.||.+++||. .|+...++.+|.++|.+++|....   ..+++++.|.++++|.++.++.
T Consensus       103 ~hdDWVSsv~~~~~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~  181 (423)
T KOG0313|consen  103 LHDDWVSSVKGASKWILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGEN  181 (423)
T ss_pred             cchhhhhhhcccCceEEEeecCCeeEEEec-CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchh
Confidence            488889988888999999999999999996 588899999999999988886533   3599999999999999877654


Q ss_pred             EEeE---EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce--------------------eeeeeccccCccc
Q psy7482          89 EKLF---KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS--------------------AYITNLSSYGVGF  145 (327)
Q Consensus        89 ~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------------------~~~~~~~~~~~~~  145 (327)
                      ....   ..+|... |.++...+++..+++|+.|..|.+|+..+...                    ....++.....|.
T Consensus       182 ~~~~~~~~~GHk~~-V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt  260 (423)
T KOG0313|consen  182 KVKALKVCRGHKRS-VDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHT  260 (423)
T ss_pred             hhhHHhHhcccccc-eeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccc
Confidence            3221   1488888 99999999999999999999999999322110                    0001111124567


Q ss_pred             cceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc---eeE
Q psy7482         146 ENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS---HLW  220 (327)
Q Consensus       146 ~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~---~~~  220 (327)
                      .+|.++.|++.+ .+.+++ |.+|+.||+.+++....+..+..+.++..+|. .+|++|+.|..+++||.+++.   ..+
T Consensus       261 ~~Vs~V~w~d~~-v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~  339 (423)
T KOG0313|consen  261 EPVSSVVWSDAT-VIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQ  339 (423)
T ss_pred             cceeeEEEcCCC-ceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEE
Confidence            889999999844 455555 99999999999999999999999999999998 899999999999999998764   367


Q ss_pred             EeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-eeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEcc
Q psy7482         221 QIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-HLWHIKASASRIKGLASHR-NHLICITSAGDLVVWELN  298 (327)
Q Consensus       221 ~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~  298 (327)
                      ++.+|.+.|.++.|+| .+...|++|+.|+++++||+++.+ ++..+.+|.+.|.++.|.. ..|++|+.|.+|+|+.-.
T Consensus       340 s~~gH~nwVssvkwsp-~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~  418 (423)
T KOG0313|consen  340 SLIGHKNWVSSVKWSP-TNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS  418 (423)
T ss_pred             eeecchhhhhheecCC-CCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence            7899999999999985 667788999999999999999988 9999999999999999999 799999999999998765


Q ss_pred             C
Q psy7482         299 E  299 (327)
Q Consensus       299 ~  299 (327)
                      .
T Consensus       419 ~  419 (423)
T KOG0313|consen  419 P  419 (423)
T ss_pred             c
Confidence            4

>KOG0265|consensus

Probab=100.00  E-value=4.6e-38  Score=232.85  Aligned_cols=268  Identities=18%  Similarity=0.257  Sum_probs=228.6

Q ss_pred             cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC-eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          46 QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        46 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      ++..+.+|++.|..+.|+|+|.+|++|+.|..|.+|++... +-...+ ++|.+. |..+.|.+|+..+++++.|.+++.
T Consensus        39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~l-kgHsgA-VM~l~~~~d~s~i~S~gtDk~v~~  116 (338)
T KOG0265|consen   39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVL-KGHSGA-VMELHGMRDGSHILSCGTDKTVRG  116 (338)
T ss_pred             hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeee-ccccce-eEeeeeccCCCEEEEecCCceEEE
Confidence            45567899999999999999999999999999999997533 334445 789998 999999999999999999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCc-EEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEE
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-LYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCT  201 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~  201 (327)
                      ||+++|+.....+.+.     .-++++.-+.-|. ++.+++ |+++++||+++.+.++++....+++++.|..+ ..+.+
T Consensus       117 wD~~tG~~~rk~k~h~-----~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~s  191 (338)
T KOG0265|consen  117 WDAETGKRIRKHKGHT-----SFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVIS  191 (338)
T ss_pred             Eecccceeeehhcccc-----ceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceee
Confidence            9999999866554443     3477777444554 455555 89999999999999999999999999999887 88999


Q ss_pred             eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC----ceeEEeeccc----Cce
Q psy7482         202 GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG----SHLWHIKASA----SRI  273 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~----~~v  273 (327)
                      |+-|+.|++||++....+..+.+|..+|+.+..  +++|.++.+-+.|.++++||++..    .++..+.+|.    ...
T Consensus       192 ggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsl--s~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknl  269 (338)
T KOG0265|consen  192 GGIDNDIKVWDLRKNDGLYTLSGHADTITGLSL--SRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNL  269 (338)
T ss_pred             ccccCceeeeccccCcceEEeecccCceeeEEe--ccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhc
Confidence            999999999999999999999999999999999  499999999999999999998753    3577777764    345


Q ss_pred             EEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         274 KGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       274 ~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ...+|+|  ..+.+|+.|..+++||.....    .......|.+.|++++|+|.+
T Consensus       270 L~cswsp~~~~i~ags~dr~vyvwd~~~r~----~lyklpGh~gsvn~~~Fhp~e  320 (338)
T KOG0265|consen  270 LKCSWSPNGTKITAGSADRFVYVWDTTSRR----ILYKLPGHYGSVNEVDFHPTE  320 (338)
T ss_pred             ceeeccCCCCccccccccceEEEeeccccc----EEEEcCCcceeEEEeeecCCC
Confidence            6778999  899999999999999998862    344455677889999999964

>KOG0278|consensus

Probab=100.00  E-value=1.2e-39  Score=235.47  Aligned_cols=284  Identities=15%  Similarity=0.213  Sum_probs=252.9

Q ss_pred             eeeccCCccEEEEEe-----CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482           8 FVTHSHTASVRSVAA-----TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~-----~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      +.-+||+.+|..++|     +|-+|++++.||.-.+-+-++|..+.++.+|.+.|.....+.+...-++++.|-+-++||
T Consensus         8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~   87 (334)
T KOG0278|consen    8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWD   87 (334)
T ss_pred             eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhh
Confidence            455799999999999     788999999999999999999999999999999999999999888889999999999999


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      .-+|..+..+  .|..- |..++|+.|.++|++|+.+..+++||++..+..    ......|...|..+.|....+.+++
T Consensus        88 a~tgdelhsf--~hkhi-vk~~af~~ds~~lltgg~ekllrvfdln~p~Ap----p~E~~ghtg~Ir~v~wc~eD~~iLS  160 (334)
T KOG0278|consen   88 AVTGDELHSF--EHKHI-VKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAP----PKEISGHTGGIRTVLWCHEDKCILS  160 (334)
T ss_pred             hhhhhhhhhh--hhhhe-eeeEEecccchhhhccchHHHhhhhhccCCCCC----chhhcCCCCcceeEEEeccCceEEe
Confidence            9999999988  44444 999999999999999999999999999865532    2223444566999999887777777


Q ss_pred             ec-CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCc
Q psy7482         163 PI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET  241 (327)
Q Consensus       163 ~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~  241 (327)
                      +. |++|++||.++++.++.+..+.+++++.+++++.+++....+.|.+||..+...++.++.. ..|.+...+  |+..
T Consensus       161 Sadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P-~nV~SASL~--P~k~  237 (334)
T KOG0278|consen  161 SADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMP-CNVESASLH--PKKE  237 (334)
T ss_pred             eccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCc-ccccccccc--CCCc
Confidence            55 9999999999999999999999999999999998889889999999999999888887654 347777775  8889


Q ss_pred             EEEEecCCCeEEEEEcCCCceeEEe-ecccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482         242 TVCTGNEESAITAYNLTDGSHLWHI-KASASRIKGLASHR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      .+++|++|..++.||..+++.+..+ ++|.++|.++.|+|  ...++||+||+|++|....+.
T Consensus       238 ~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~  300 (334)
T KOG0278|consen  238 FFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK  300 (334)
T ss_pred             eEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence            9999999999999999999998886 89999999999999  899999999999999998873

>KOG0276|consensus

Probab=100.00  E-value=1.4e-38  Score=257.20  Aligned_cols=282  Identities=18%  Similarity=0.280  Sum_probs=250.9

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      ++++++.  .|+.+|.++.+  ....++++-.+|.|.|||.++...+..+.-...+|.+..|-+..+.+++|+.|..|++
T Consensus         4 ~~krk~~--~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrV   81 (794)
T KOG0276|consen    4 DFKRKFQ--SRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRV   81 (794)
T ss_pred             hhhhHhh--ccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEE
Confidence            3444444  59999999999  7789999999999999999999999999989999999999999999999999999999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcE
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLL  159 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~  159 (327)
                      |+.++++.+..+ ..|.+. |.+++.+|...++++++.|-.|++||.+.+ ......+.++   ...|.+++|+| |.+.
T Consensus        82 fnynt~ekV~~F-eAH~Dy-IR~iavHPt~P~vLtsSDDm~iKlW~we~~-wa~~qtfeGH---~HyVMqv~fnPkD~nt  155 (794)
T KOG0276|consen   82 FNYNTGEKVKTF-EAHSDY-IRSIAVHPTLPYVLTSSDDMTIKLWDWENE-WACEQTFEGH---EHYVMQVAFNPKDPNT  155 (794)
T ss_pred             EecccceeeEEe-eccccc-eeeeeecCCCCeEEecCCccEEEEeeccCc-eeeeeEEcCc---ceEEEEEEecCCCccc
Confidence            999999999999 999999 999999999999999999999999998753 3333333333   34599999999 4578


Q ss_pred             EEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC---ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482         160 YAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE---TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF  234 (327)
Q Consensus       160 l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  234 (327)
                      +++++ |++|++|.+.+..+..+++ |...|+++.+-+.   .+|++|+.|.++++||.++..+++++.+|...|..+.|
T Consensus       156 FaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~f  235 (794)
T KOG0276|consen  156 FASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFF  235 (794)
T ss_pred             eeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEe
Confidence            88888 9999999999999999998 8999999999885   49999999999999999999999999999999999999


Q ss_pred             EecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEE
Q psy7482         235 FSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVV  294 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~i  294 (327)
                      +  |.-..+++|++||+++||+..+.+...++.-.-+.+++++-.+  +.++.|.+.|.|.+
T Consensus       236 h--p~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v  295 (794)
T KOG0276|consen  236 H--PELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV  295 (794)
T ss_pred             c--CCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence            7  8999999999999999999999888888887778999999887  77788877776543

>KOG0643|consensus

Probab=100.00  E-value=1.7e-38  Score=231.60  Aligned_cols=284  Identities=15%  Similarity=0.236  Sum_probs=236.4

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      +.+.++||..+++.+.+  +|.+|.+++.|.+..+|-..+|+.+.++.+|.+.|+|+....+.+.+++|+.|.++++||+
T Consensus         2 rpi~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv   81 (327)
T KOG0643|consen    2 RPILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDV   81 (327)
T ss_pred             CccccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEc
Confidence            34667899999999999  9999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC-----CCCEEEEEcCCC-------ceeeeeeccccCccccceEEE
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-----DKTLRTWNLVKG-------RSAYITNLSSYGVGFENLDSV  151 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~-------~~~~~~~~~~~~~~~~~v~~~  151 (327)
                      ++|+.+..++   .+.+|..+.|+++|++++....     .+.|.++|++..       ++...+..+     ...++.+
T Consensus        82 ~tGk~la~~k---~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~-----~skit~a  153 (327)
T KOG0643|consen   82 ETGKQLATWK---TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTP-----DSKITSA  153 (327)
T ss_pred             CCCcEEEEee---cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCC-----ccceeee
Confidence            9999999883   2334999999999998877654     467999999843       223333222     2449999


Q ss_pred             EEccCCcEEEeec-CCeEEEEEecCCceeeEe-c-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeeccc
Q psy7482         152 VWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL-K-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASAS  227 (327)
Q Consensus       152 ~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~-~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  227 (327)
                      -|.|-++.+++|. +|.|.+||+++++....- + |...|+.++++++ .++++++.|.+-++||..+.+.++++. ...
T Consensus       154 ~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te~  232 (327)
T KOG0643|consen  154 LWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TER  232 (327)
T ss_pred             eecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEee-ecc
Confidence            9999999999997 999999999998655444 3 8889999999999 899999999999999999999998886 457


Q ss_pred             ceEEEEEEecCCCcEEEEecCCCe--EE------------EEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCc
Q psy7482         228 RIKGLVFFSIPQETTVCTGNEESA--IT------------AYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGD  291 (327)
Q Consensus       228 ~v~~~~~~~s~~~~~l~~~~~d~~--i~------------i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~  291 (327)
                      |+++.+++  |....++.|+....  |.            +|++--.+.+..+++|-++|++++|+|  ...++|++||.
T Consensus       233 PvN~aais--P~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~  310 (327)
T KOG0643|consen  233 PVNTAAIS--PLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGY  310 (327)
T ss_pred             cccceecc--cccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCce
Confidence            89999995  66666665543221  22            222222346678899999999999999  88999999999


Q ss_pred             EEEEEccCc
Q psy7482         292 LVVWELNED  300 (327)
Q Consensus       292 v~iw~~~~~  300 (327)
                      ||+..++..
T Consensus       311 VR~h~Fd~~  319 (327)
T KOG0643|consen  311 VRLHHFDSN  319 (327)
T ss_pred             EEEEEeccc
Confidence            999887765

>KOG0306|consensus

Probab=100.00  E-value=4.6e-38  Score=258.99  Aligned_cols=290  Identities=19%  Similarity=0.319  Sum_probs=252.8

Q ss_pred             EEeeeeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           5 TQTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         5 ~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      ...+...||...|+++++ +.+.++..+..+.+++|+..+.++++++..  +.+.+..|.|.++++++|...|.+.++|+
T Consensus       364 ~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~--~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdl  441 (888)
T KOG0306|consen  364 TSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITC--GYILASKFVPGDRYIVLGTKNGELQVFDL  441 (888)
T ss_pred             cceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEecc--ccEEEEEecCCCceEEEeccCCceEEEEe
Confidence            345677899999999999 444444444578899999999999999874  37899999999999999999999999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC-----Cceeeeeecccc--CccccceEEEEEccC
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK-----GRSAYITNLSSY--GVGFENLDSVVWSPE  156 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~--~~~~~~v~~~~~~~~  156 (327)
                      .+...+.++ .+|.+. |++++.+||++.+++|+.|.+|++||..-     +.....+.+...  -.-.+.+.|+.+|||
T Consensus       442 aS~~l~Eti-~AHdga-IWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spd  519 (888)
T KOG0306|consen  442 ASASLVETI-RAHDGA-IWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPD  519 (888)
T ss_pred             ehhhhhhhh-hccccc-eeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCC
Confidence            999999998 799998 99999999999999999999999999742     111111111111  011234999999999


Q ss_pred             CcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEE
Q psy7482         157 GLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLV  233 (327)
Q Consensus       157 ~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~  233 (327)
                      +++++++- |+++++|-+.+.+..-.+- |.-||.|+..+|| .++++|+.|..|++|-+.-|.+-+.+-+|...|.++.
T Consensus       520 gk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~  599 (888)
T KOG0306|consen  520 GKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQ  599 (888)
T ss_pred             CcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEE
Confidence            99999997 9999999999988766665 9999999999999 8999999999999999999999999999999999999


Q ss_pred             EEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         234 FFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      |.  |....+++++.|+.|+-||-...+.+..+.+|...|++++.+|  .+++++|.|..|++|.....
T Consensus       600 F~--P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde  666 (888)
T KOG0306|consen  600 FL--PKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDE  666 (888)
T ss_pred             Ec--ccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccCc
Confidence            97  8999999999999999999999999999999999999999999  79999999999999998764

>KOG1407|consensus

Probab=100.00  E-value=6.5e-37  Score=222.62  Aligned_cols=269  Identities=16%  Similarity=0.213  Sum_probs=237.1

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccccccc--ccccccccEEEEEECC-CCCeEEEecCCCcEEEEEc
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG--ALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~   83 (327)
                      .+++|.+.|.+++|  +|..|++|+.|+++.+|+++..+...  ...+|.+.|-.++|+| +...+++++.|.+|++||+
T Consensus        15 ~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~   94 (313)
T KOG1407|consen   15 ELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDI   94 (313)
T ss_pred             HhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEe
Confidence            45689999999999  99999999999999999998775544  3567999999999998 5678999999999999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      +++++.... ....+  =.-+.|+|+|++++.++.|..|.+.|.++.+.....+....      +..++|+.++.++...
T Consensus        95 r~~k~~~~i-~~~~e--ni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e------~ne~~w~~~nd~Fflt  165 (313)
T KOG1407|consen   95 RSGKCTARI-ETKGE--NINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFE------VNEISWNNSNDLFFLT  165 (313)
T ss_pred             ccCcEEEEe-eccCc--ceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccce------eeeeeecCCCCEEEEe
Confidence            999998887 33333  34578999999999999999999999998887766666555      8889999777766665


Q ss_pred             c-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482         164 I-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       164 ~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      . .|.|.|......+++..++ |+....|+.|+|+ .++++|+.|-.+.+||+...-+++.+.-+.-+|+.+.|+  .+|
T Consensus       166 ~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS--~dg  243 (313)
T KOG1407|consen  166 NGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFS--HDG  243 (313)
T ss_pred             cCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEec--cCc
Confidence            5 7999999999999999999 9999999999999 899999999999999999998999999999999999995  899


Q ss_pred             cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecC
Q psy7482         241 TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSA  289 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d  289 (327)
                      ++||+|++|..|-|=++++|..++.++ +.++...++|+|  .+||-+.+|
T Consensus       244 ~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  244 RMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             ceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecC
Confidence            999999999999999999999999988 677999999999  777777655

>KOG0316|consensus

Probab=100.00  E-value=1.5e-37  Score=222.86  Aligned_cols=264  Identities=15%  Similarity=0.280  Sum_probs=226.1

Q ss_pred             cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEE
Q psy7482          46 QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW  125 (327)
Q Consensus        46 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  125 (327)
                      ....+..++++|.++.|+-+|+|.++++.|++|++|+...+.+++++ .+|... |..++.+.|+..+++|+.|..+.+|
T Consensus         9 r~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktY-sghG~E-VlD~~~s~Dnskf~s~GgDk~v~vw   86 (307)
T KOG0316|consen    9 RLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTY-SGHGHE-VLDAALSSDNSKFASCGGDKAVQVW   86 (307)
T ss_pred             hceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeee-cCCCce-eeeccccccccccccCCCCceEEEE
Confidence            34567889999999999999999999999999999999999999999 888877 9999999999999999999999999


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC--ceeeEec-CCCceeEEEeecCceEEE
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA--GVLQTLK-SESKVHSVCFLNETTVCT  201 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~--~~~~~~~-~~~~i~~~~~~~~~~l~~  201 (327)
                      |+.+|+....+..+     ...|+.+.|+.+...+++|+ |..+++||.++.  ++++.+. ....|.++.... ..+++
T Consensus        87 DV~TGkv~Rr~rgH-----~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~-heIva  160 (307)
T KOG0316|consen   87 DVNTGKVDRRFRGH-----LAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAE-HEIVA  160 (307)
T ss_pred             EcccCeeeeecccc-----cceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecc-cEEEe
Confidence            99999986665433     44599999999999999998 999999998764  5777776 677888888753 68899


Q ss_pred             eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEE--eee
Q psy7482         202 GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGL--ASH  279 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~--~~~  279 (327)
                      |+.||+++.||++.|+....+-+  .+|+++.|  +++++..++++.|+++++.|-.+|+++..+++|.+.=+.+  ++.
T Consensus       161 GS~DGtvRtydiR~G~l~sDy~g--~pit~vs~--s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~  236 (307)
T KOG0316|consen  161 GSVDGTVRTYDIRKGTLSSDYFG--HPITSVSF--SKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLN  236 (307)
T ss_pred             eccCCcEEEEEeecceeehhhcC--CcceeEEe--cCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeec
Confidence            99999999999999987665544  47999999  4999999999999999999999999999999998654443  444


Q ss_pred             C--cEEEEEecCCcEEEEEccCccCCCceeeeecC-CCCc-eEEEEeCCCC
Q psy7482         280 R--NHLICITSAGDLVVWELNEDVTREPQRVSATN-DGCR-FTCLAIRPPV  326 (327)
Q Consensus       280 ~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~-i~~l~~~p~~  326 (327)
                      .  ..+++|++||.|++||+...     ..+.... ++.. +++++++|..
T Consensus       237 qsdthV~sgSEDG~Vy~wdLvd~-----~~~sk~~~~~~v~v~dl~~hp~~  282 (307)
T KOG0316|consen  237 QSDTHVFSGSEDGKVYFWDLVDE-----TQISKLSVVSTVIVTDLSCHPTM  282 (307)
T ss_pred             ccceeEEeccCCceEEEEEeccc-----eeeeeeccCCceeEEeeecccCc
Confidence            4  89999999999999999888     3333333 3444 7899999864

>KOG0285|consensus

Probab=100.00  E-value=1e-37  Score=236.39  Aligned_cols=246  Identities=17%  Similarity=0.305  Sum_probs=226.5

Q ss_pred             cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEE
Q psy7482          46 QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW  125 (327)
Q Consensus        46 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  125 (327)
                      ..+.+.+|.+.|.|+++.|.++++++|+.|++++|||+.++++..++ .+|... |..+++++...|+++++.|+.|+.|
T Consensus       143 l~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lkltl-tGhi~~-vr~vavS~rHpYlFs~gedk~VKCw  220 (460)
T KOG0285|consen  143 LYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTL-TGHIET-VRGVAVSKRHPYLFSAGEDKQVKCW  220 (460)
T ss_pred             ehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEee-cchhhe-eeeeeecccCceEEEecCCCeeEEE
Confidence            34567899999999999999999999999999999999999999999 899988 9999999999999999999999999


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEe
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTG  202 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~  202 (327)
                      |++..+.+..+     ..|-..|.+++.+|.-..+++++ |..+++||+++...+..+. |..+|.++.+.|- ..+++|
T Consensus       221 DLe~nkvIR~Y-----hGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~  295 (460)
T KOG0285|consen  221 DLEYNKVIRHY-----HGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITG  295 (460)
T ss_pred             echhhhhHHHh-----ccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEe
Confidence            99988775433     33455699999999999999887 9999999999999999998 9999999999885 899999


Q ss_pred             CCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-c
Q psy7482         203 NEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-N  281 (327)
Q Consensus       203 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~  281 (327)
                      +.|++|++||++.++...++..|...+.+++.+  |....+|+++.| .|+-|++..+..+..+.+|+..|++++... .
T Consensus       296 S~D~tvrlWDl~agkt~~tlt~hkksvral~lh--P~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~  372 (460)
T KOG0285|consen  296 SHDSTVRLWDLRAGKTMITLTHHKKSVRALCLH--PKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG  372 (460)
T ss_pred             cCCceEEEeeeccCceeEeeecccceeeEEecC--CchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc
Confidence            999999999999999999999999999999997  888889998876 599999999999999999999999999988 9


Q ss_pred             EEEEEecCCcEEEEEccCcc
Q psy7482         282 HLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       282 ~l~~~~~dg~v~iw~~~~~~  301 (327)
                      ++++|++.|.+.+||..++.
T Consensus       373 v~~~G~dng~~~fwdwksg~  392 (460)
T KOG0285|consen  373 VLVSGGDNGSIMFWDWKSGH  392 (460)
T ss_pred             eEEEcCCceEEEEEecCcCc
Confidence            99999999999999999884

>KOG0645|consensus

Probab=100.00  E-value=1.6e-36  Score=221.67  Aligned_cols=270  Identities=14%  Similarity=0.267  Sum_probs=223.6

Q ss_pred             cccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCC---CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC
Q psy7482          46 QSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGS---WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT  121 (327)
Q Consensus        46 ~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  121 (327)
                      .++.+++|.+.+..++|+|- |..||+++.|+.|++|+...   ..+...+..+|... |.+++|+|.|++|++++.|.+
T Consensus         6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrs-VRsvAwsp~g~~La~aSFD~t   84 (312)
T KOG0645|consen    6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRS-VRSVAWSPHGRYLASASFDAT   84 (312)
T ss_pred             eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchhe-eeeeeecCCCcEEEEeeccce
Confidence            45678899999999999997 88999999999999999984   45566665678888 999999999999999999999


Q ss_pred             EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCc---eeeEec-CCCceeEEEeecC
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAG---VLQTLK-SESKVHSVCFLNE  196 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~---~~~~~~-~~~~i~~~~~~~~  196 (327)
                      +.||.-..++......+.++   ...|.+++|+++|++||+++ |..+-||.+..+.   +...++ |...|..+.|+|.
T Consensus        85 ~~Iw~k~~~efecv~~lEGH---EnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt  161 (312)
T KOG0645|consen   85 VVIWKKEDGEFECVATLEGH---ENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT  161 (312)
T ss_pred             EEEeecCCCceeEEeeeecc---ccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCC
Confidence            99999776665554444444   56699999999999999999 9999999988554   445555 8889999999998


Q ss_pred             -ceEEEeCCCCcEEEEEcC---CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCc
Q psy7482         197 -TTVCTGNEESAITAYNLT---DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASR  272 (327)
Q Consensus       197 -~~l~~~~~d~~i~i~d~~---~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  272 (327)
                       .+|++++.|++|++|+-.   ..+++.++.+|...|.+++|.  +.|..|++++.|++++||.....-    -..|..+
T Consensus       162 ~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~--~~G~rl~s~sdD~tv~Iw~~~~~~----~~~~sr~  235 (312)
T KOG0645|consen  162 EDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFD--NIGSRLVSCSDDGTVSIWRLYTDL----SGMHSRA  235 (312)
T ss_pred             cceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEec--CCCceEEEecCCcceEeeeeccCc----chhcccc
Confidence             899999999999999876   345789999999999999995  889999999999999999865221    1236778


Q ss_pred             eEEEeeeCcEEEEEecCCcEEEEEccCccCC-Cceee--eecCCCCceEEEEeCCC
Q psy7482         273 IKGLASHRNHLICITSAGDLVVWELNEDVTR-EPQRV--SATNDGCRFTCLAIRPP  325 (327)
Q Consensus       273 v~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~-~~~~~--~~~~~~~~i~~l~~~p~  325 (327)
                      ++.++|....|++++.|+.|++|.-.....+ ....+  ....|...|++++|+|.
T Consensus       236 ~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~  291 (312)
T KOG0645|consen  236 LYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPK  291 (312)
T ss_pred             eEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCC
Confidence            9999999899999999999999988754211 11112  22347778999999993

>KOG0292|consensus

Probab=100.00  E-value=3.2e-37  Score=258.41  Aligned_cols=279  Identities=15%  Similarity=0.279  Sum_probs=247.5

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      ..+.+|..++|  ....++++-..|.|++||.+-+.++..+.+|.++|..++|+|.+.++++|+.|..|++|+..+.+++
T Consensus         7 skSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrcl   86 (1202)
T KOG0292|consen    7 SKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCL   86 (1202)
T ss_pred             cccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceeh
Confidence            56788999999  7789999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeE
Q psy7482          90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKA  168 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i  168 (327)
                      .++ .+|.+. |..+.|++.-.++++++.|.+|+||+..+++++.....+.+     .|.|..|+|...++++++ |.+|
T Consensus        87 ftL-~GHlDY-VRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnH-----YVMcAqFhptEDlIVSaSLDQTV  159 (1202)
T KOG0292|consen   87 FTL-LGHLDY-VRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNH-----YVMCAQFHPTEDLIVSASLDQTV  159 (1202)
T ss_pred             hhh-ccccce-eEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCce-----EEEeeccCCccceEEEecccceE
Confidence            999 999999 99999999999999999999999999999999888776655     399999999999999998 9999


Q ss_pred             EEEEecCCc----------------------------e-eeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc
Q psy7482         169 VVFSVEKAG----------------------------V-LQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS  217 (327)
Q Consensus       169 ~i~d~~~~~----------------------------~-~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~  217 (327)
                      ++||+...+                            . ...+. |...|+-++|+|. .++++|+.|..|++|.+...+
T Consensus       160 RVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetK  239 (1202)
T KOG0292|consen  160 RVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETK  239 (1202)
T ss_pred             EEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecccc
Confidence            999985311                            0 11223 7788999999998 899999999999999987654


Q ss_pred             e--eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEE
Q psy7482         218 H--LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLV  293 (327)
Q Consensus       218 ~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~  293 (327)
                      .  +.+.++|.+.|.++.|+  |...++++.++|+.|++||+...+.+.+++..++.-+.++-+|  +++++ +.|+-+.
T Consensus       240 aWEvDtcrgH~nnVssvlfh--p~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAA-gHDsGm~  316 (1202)
T KOG0292|consen  240 AWEVDTCRGHYNNVSSVLFH--PHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAA-GHDSGMI  316 (1202)
T ss_pred             ceeehhhhcccCCcceEEec--CccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeee-ecCCceE
Confidence            3  56678999999999997  8999999999999999999999999999988888999999999  55554 4566666


Q ss_pred             EEEccCc
Q psy7482         294 VWELNED  300 (327)
Q Consensus       294 iw~~~~~  300 (327)
                      ||.++..
T Consensus       317 VFkleRE  323 (1202)
T KOG0292|consen  317 VFKLERE  323 (1202)
T ss_pred             EEEEccc
Confidence            7777643

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=8.6e-36  Score=239.92  Aligned_cols=266  Identities=24%  Similarity=0.434  Sum_probs=230.1

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN  126 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  126 (327)
                      +.++.+|..+|++++|+|++++|++++.||.+++|++.+++....+ ..|... +..+.|+|+++++++++.+|.|++||
T Consensus         2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~~~~~~i~i~~   79 (289)
T cd00200           2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTL-KGHTGP-VRDVAASADGTYLASGSSDKTIRLWD   79 (289)
T ss_pred             chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEE-ecCCcc-eeEEEECCCCCEEEEEcCCCeEEEEE
Confidence            3567789999999999999999999999999999999988877776 677776 88999999999999999999999999


Q ss_pred             cCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeC
Q psy7482         127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGN  203 (327)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~  203 (327)
                      +.+++....+...     ...+.++.|+|++++++++. ++.+.+||+++++....+. +...+.+++|+|+ .++++++
T Consensus        80 ~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  154 (289)
T cd00200          80 LETGECVRTLTGH-----TSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSS  154 (289)
T ss_pred             cCcccceEEEecc-----CCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEc
Confidence            9987655544422     23499999999999999988 9999999999888888887 7889999999997 6677777


Q ss_pred             CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--c
Q psy7482         204 EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--N  281 (327)
Q Consensus       204 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~  281 (327)
                      .++.+++||+++++.+..+..|...+.++.|.  |+++.+++++.|+.|++||+..++.+..+..|...+.++.|+|  .
T Consensus       155 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~  232 (289)
T cd00200         155 QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFS--PDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGY  232 (289)
T ss_pred             CCCcEEEEEccccccceeEecCccccceEEEC--CCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCc
Confidence            79999999999998888899999899999995  8998999999999999999999999999988999999999999  6


Q ss_pred             EEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         282 HLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       282 ~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++++++.||.|++|++....  ....+.  .+...|.+++|+|+
T Consensus       233 ~~~~~~~~~~i~i~~~~~~~--~~~~~~--~~~~~i~~~~~~~~  272 (289)
T cd00200         233 LLASGSEDGTIRVWDLRTGE--CVQTLS--GHTNSVTSLAWSPD  272 (289)
T ss_pred             EEEEEcCCCcEEEEEcCCce--eEEEcc--ccCCcEEEEEECCC
Confidence            77777779999999998762  222222  56678999999995

>KOG0275|consensus

Probab=100.00  E-value=3.1e-38  Score=236.85  Aligned_cols=276  Identities=18%  Similarity=0.293  Sum_probs=242.8

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc--------cccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM--------QHEGTITCLKFTPEGSHLISCSDDGSIAIF   81 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw   81 (327)
                      |..+.+.|..|  ||++|++|+.||.|.+||..+|+....++        -+..+|.|+.|+.|.+.||+|+.||.|++|
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW  290 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW  290 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence            45666778888  99999999999999999999997655433        477899999999999999999999999999


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      .+.+|++++.+...|... |+++.|+.|+..+++++.|.++++.-+.+|+++..+.     .|...|+...|.++|..++
T Consensus       291 ri~tG~ClRrFdrAHtkG-vt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfr-----GHsSyvn~a~ft~dG~~ii  364 (508)
T KOG0275|consen  291 RIETGQCLRRFDRAHTKG-VTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFR-----GHSSYVNEATFTDDGHHII  364 (508)
T ss_pred             EEecchHHHHhhhhhccC-eeEEEEccCcchhhcccccceEEEeccccchhHHHhc-----CccccccceEEcCCCCeEE
Confidence            999999999997799988 9999999999999999999999999999999865543     3445699999999999998


Q ss_pred             eec-CCeEEEEEecCCceeeEec---CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeec---ccceEEE
Q psy7482         162 IPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKAS---ASRIKGL  232 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~v~~~  232 (327)
                      +++ ||++++|+..+.+++.+++   ...+|.++-..|.  ..++++...+++++.++. |+.++.+...   .+...+.
T Consensus       365 saSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~  443 (508)
T KOG0275|consen  365 SASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINA  443 (508)
T ss_pred             EecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEE
Confidence            887 9999999999999999888   4567888888886  789999999999999985 7788877432   2334444


Q ss_pred             EEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         233 VFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      +.  ||.|.++.+.++|+.++.|...+|++..++..|+..+..++-+|  +.||+-++||.+++|.
T Consensus       444 ~l--SpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  444 IL--SPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             Ee--cCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence            44  59999999999999999999999999999999999999999999  9999999999999995

>KOG0276|consensus

Probab=100.00  E-value=5.6e-37  Score=247.89  Aligned_cols=267  Identities=12%  Similarity=0.215  Sum_probs=232.6

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN  126 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  126 (327)
                      .+.+..++..|.++.|+|....++++-.+|.|.|||.++...++.+ ....-+ |.+..|-+..+.+++|+.|..|++|+
T Consensus         6 krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksf-eV~~~P-vRa~kfiaRknWiv~GsDD~~IrVfn   83 (794)
T KOG0276|consen    6 KRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSF-EVSEVP-VRAAKFIARKNWIVTGSDDMQIRVFN   83 (794)
T ss_pred             hhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeee-eecccc-hhhheeeeccceEEEecCCceEEEEe
Confidence            3456668999999999999999999999999999999999999888 444444 99999999999999999999999999


Q ss_pred             cCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC-ceeeEec-CCCceeEEEeecC--ceEEE
Q psy7482         127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA-GVLQTLK-SESKVHSVCFLNE--TTVCT  201 (327)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~-~~~~~~~-~~~~i~~~~~~~~--~~l~~  201 (327)
                      ..+++.+..+..+     .+.|++++.+|...++++++ |-.|++||.+.+ .+.+++. |...|++++|.|.  +.+++
T Consensus        84 ynt~ekV~~FeAH-----~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS  158 (794)
T KOG0276|consen   84 YNTGEKVKTFEAH-----SDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFAS  158 (794)
T ss_pred             cccceeeEEeecc-----ccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceee
Confidence            9999987766544     45599999999999999998 789999998865 4566777 8899999999996  89999


Q ss_pred             eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-
Q psy7482         202 GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-  280 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-  280 (327)
                      ++-|++|++|.+.+..+..++++|...|+++.+.+.+|..+|++|+.|..|+|||.++..++.++.+|...|..+.|+| 
T Consensus       159 ~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~  238 (794)
T KOG0276|consen  159 ASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPE  238 (794)
T ss_pred             eeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCC
Confidence            9999999999999999999999999999999998766778999999999999999999999999999999999999999 


Q ss_pred             -cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482         281 -NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       281 -~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                       ..+++|++||++|||+..+-.   .+. .......++.|++-.+
T Consensus       239 lpiiisgsEDGTvriWhs~Ty~---lE~-tLn~gleRvW~I~~~k  279 (794)
T KOG0276|consen  239 LPIIISGSEDGTVRIWNSKTYK---LEK-TLNYGLERVWCIAAHK  279 (794)
T ss_pred             CcEEEEecCCccEEEecCccee---hhh-hhhcCCceEEEEeecC
Confidence             999999999999999987762   111 1122345666666444

>KOG1446|consensus

Probab=100.00  E-value=4.4e-35  Score=218.83  Aligned_cols=286  Identities=21%  Similarity=0.352  Sum_probs=245.5

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC--CCc
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD--DGS   77 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~   77 (327)
                      ++..+.|+  .-...|.++.|  +|.++++++.|.+++|||..+++.+.++..+.-.+..++|......++.++.  |.+
T Consensus         4 ~~~ak~f~--~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~t   81 (311)
T KOG1446|consen    4 FRPAKVFR--ETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDT   81 (311)
T ss_pred             cccccccc--cCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCc
Confidence            34445555  36788999999  8999999999999999999999999999988888999999887777777766  889


Q ss_pred             EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      |+..++.+.+.++.+ .+|... |++++.+|-+..+++++.|++|++||++..++...+....       -...+|+|+|
T Consensus        82 IryLsl~dNkylRYF-~GH~~~-V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~-------~pi~AfDp~G  152 (311)
T KOG1446|consen   82 IRYLSLHDNKYLRYF-PGHKKR-VNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG-------RPIAAFDPEG  152 (311)
T ss_pred             eEEEEeecCceEEEc-CCCCce-EEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC-------CcceeECCCC
Confidence            999999999999999 999998 9999999988999999999999999999888877766654       3468999999


Q ss_pred             cEEEeec-CCeEEEEEecCC--ceeeEec----CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccce
Q psy7482         158 LLYAIPI-QNKAVVFSVEKA--GVLQTLK----SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRI  229 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~--~~~~~~~----~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v  229 (327)
                      -++|++. .+.|++||++..  .+...+.    .....+.+.|+|| +.++.+...+.+++.|.-+|..+.++..+...-
T Consensus       153 LifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~  232 (311)
T KOG1446|consen  153 LIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAG  232 (311)
T ss_pred             cEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCC
Confidence            9999998 449999999864  4555554    3578899999999 788899999999999999999988887765432


Q ss_pred             ---EEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec-ccCceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         230 ---KGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA-SASRIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       230 ---~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                         ....|  +|+++++++|+.||+|.+|+++++..+..+.+ +..++.++.|+|++..-++.+..+.+|=....
T Consensus       233 ~~~~~a~f--tPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~fw~p~~~  305 (311)
T KOG1446|consen  233 NLPLSATF--TPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASSNLVFWLPDED  305 (311)
T ss_pred             CcceeEEE--CCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecCceEEEEecccc
Confidence               34445  59999999999999999999999999999998 68899999999966666677788999977655

>KOG0296|consensus

Probab=100.00  E-value=2.7e-36  Score=229.03  Aligned_cols=248  Identities=19%  Similarity=0.234  Sum_probs=215.1

Q ss_pred             eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC
Q psy7482           7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG   84 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~   84 (327)
                      .+.+.||+++|+++.|  +|.+||||+-+|.|+||+..++.....+...-+.+.=+.|+|.+..|+.|+.||.+.+|.+.
T Consensus        99 ~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip  178 (399)
T KOG0296|consen   99 AGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIP  178 (399)
T ss_pred             eeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECC
Confidence            4566799999999999  99999999999999999999999888887667778889999999999999999999999999


Q ss_pred             CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc------C----------------
Q psy7482          85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY------G----------------  142 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~----------------  142 (327)
                      +....+.+ .+|..+ +++-.|.|+|+.++++..||+|++||+.++++.........      .                
T Consensus       179 ~~~~~kv~-~Gh~~~-ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~  256 (399)
T KOG0296|consen  179 SQALCKVM-SGHNSP-CTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGV  256 (399)
T ss_pred             CcceeeEe-cCCCCC-cccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCcc
Confidence            88777777 888877 99999999999999999999999999999987666541110      0                


Q ss_pred             ------------------------ccccceEEEEEcc---CCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEee
Q psy7482         143 ------------------------VGFENLDSVVWSP---EGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFL  194 (327)
Q Consensus       143 ------------------------~~~~~v~~~~~~~---~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~  194 (327)
                                              .+...+.++.+.|   .-.+.|+|+ ||+|.|||+...+......|+.+|..+.|.
T Consensus       257 ~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~  336 (399)
T KOG0296|consen  257 ACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWL  336 (399)
T ss_pred             EEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheeccCCCceEEEEEc
Confidence                                    0001122333333   335677787 999999999999999999999999999999


Q ss_pred             cCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         195 NETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       195 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                      +..+|++++.+|.|+.||.++|+.+.++.+|...|.++++.  |+.++++++|.|+..+||+..
T Consensus       337 ~t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls--~~~~~vvT~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  337 NTDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALS--PQKRLVVTVSDDNTALVFEVP  398 (399)
T ss_pred             CcchheeeccCceEEeeeccccceEEEEecCchheeEEEEc--CCCcEEEEecCCCeEEEEecC
Confidence            98899999999999999999999999999999999999994  999999999999999999864

>KOG0283|consensus

Probab=100.00  E-value=8.9e-37  Score=254.73  Aligned_cols=236  Identities=17%  Similarity=0.320  Sum_probs=204.3

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccc--------------------------------c-------------
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVK--------------------------------R-------------   44 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~--------------------------------~-------------   44 (327)
                      +|.+.|++|.|  ||+|||+||.|+.|+||.+..                                .             
T Consensus       265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~  344 (712)
T KOG0283|consen  265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ  344 (712)
T ss_pred             ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence            79999999999  999999999999999998755                                0             


Q ss_pred             ---------------ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec-
Q psy7482          45 ---------------KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP-  108 (327)
Q Consensus        45 ---------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-  108 (327)
                                     +++..+.+|.+.|..+.|+.+ ++|++++.|.+|++|++...++++.|  .|.+. |+|++|+| 
T Consensus       345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F--~Hndf-VTcVaFnPv  420 (712)
T KOG0283|consen  345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVF--SHNDF-VTCVAFNPV  420 (712)
T ss_pred             CccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEE--ecCCe-eEEEEeccc
Confidence                           134567899999999999975 58999999999999999999999998  67777 99999999 


Q ss_pred             CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec---C
Q psy7482         109 SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK---S  184 (327)
Q Consensus       109 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~  184 (327)
                      |.+++++|+-||.|+||++...+...-..+...      |++++|.|+|+..++|+ +|.+++|+....+......   +
T Consensus       421 DDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~l------ITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~  494 (712)
T KOG0283|consen  421 DDRYFISGSLDGKVRLWSISDKKVVDWNDLRDL------ITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLH  494 (712)
T ss_pred             CCCcEeecccccceEEeecCcCeeEeehhhhhh------heeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeec
Confidence            889999999999999999988877766666655      99999999999999998 9999999999887766543   1


Q ss_pred             ------CCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecccce--EEEEEEecCCCcEEEEecCCCeEEE
Q psy7482         185 ------ESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASASRI--KGLVFFSIPQETTVCTGNEESAITA  254 (327)
Q Consensus       185 ------~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v--~~~~~~~s~~~~~l~~~~~d~~i~i  254 (327)
                            ...|+.+.|.|.  ..+++.+.|..|+|||.++.+.+..|+++...-  ....|  +.||++|+++++|..|++
T Consensus       495 ~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asf--s~Dgk~IVs~seDs~VYi  572 (712)
T KOG0283|consen  495 NKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASF--SSDGKHIVSASEDSWVYI  572 (712)
T ss_pred             cCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeE--ccCCCEEEEeecCceEEE
Confidence                  337999999986  568899999999999999999999998765432  33445  489999999999999999


Q ss_pred             EEcCC
Q psy7482         255 YNLTD  259 (327)
Q Consensus       255 ~d~~~  259 (327)
                      |+...
T Consensus       573 W~~~~  577 (712)
T KOG0283|consen  573 WKNDS  577 (712)
T ss_pred             EeCCC
Confidence            99743

>KOG0278|consensus

Probab=100.00  E-value=5.1e-38  Score=227.18  Aligned_cols=242  Identities=20%  Similarity=0.324  Sum_probs=223.2

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      +.||.+.|+..+.  +....|+++.|-+-++||.-+|..+..+. |..-|.+++|+.|.++|++|+.++.++|+|++..+
T Consensus        55 feghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~  133 (334)
T KOG0278|consen   55 FEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK  133 (334)
T ss_pred             eeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCC
Confidence            4599999999999  45567889999999999999999999986 88999999999999999999999999999998765


Q ss_pred             E-EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCC
Q psy7482          88 L-EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN  166 (327)
Q Consensus        88 ~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~  166 (327)
                      . ...+ .+|.+. |..+.|....+.+++++.|++|++||.+++..++.+.+...      |.++..+++|.++..+..+
T Consensus       134 App~E~-~ghtg~-Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~------VtSlEvs~dG~ilTia~gs  205 (334)
T KOG0278|consen  134 APPKEI-SGHTGG-IRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSP------VTSLEVSQDGRILTIAYGS  205 (334)
T ss_pred             CCchhh-cCCCCc-ceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCC------CcceeeccCCCEEEEecCc
Confidence            3 4455 788888 99999999889999999999999999999999999988877      9999999999999999999


Q ss_pred             eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEe-eecccceEEEEEEecCCCcEEE
Q psy7482         167 KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQI-KASASRIKGLVFFSIPQETTVC  244 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~  244 (327)
                      .|.+||..+...++.++-+..|.+...+|+ +.+++|++|..++.||..+++.+..+ ++|.++|.++.|  +|+|...+
T Consensus       206 sV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrF--SPdGE~yA  283 (334)
T KOG0278|consen  206 SVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRF--SPDGELYA  283 (334)
T ss_pred             eeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEE--CCCCceee
Confidence            999999999999999999999999999999 89999999999999999999998886 899999999999  59999999


Q ss_pred             EecCCCeEEEEEcCCCce
Q psy7482         245 TGNEESAITAYNLTDGSH  262 (327)
Q Consensus       245 ~~~~d~~i~i~d~~~~~~  262 (327)
                      +|++||+|++|....++.
T Consensus       284 sGSEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  284 SGSEDGTIRLWQTTPGKT  301 (334)
T ss_pred             ccCCCceEEEEEecCCCc
Confidence            999999999999876653

>KOG1407|consensus

Probab=100.00  E-value=2.3e-36  Score=219.72  Aligned_cols=265  Identities=16%  Similarity=0.228  Sum_probs=236.1

Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE-EecccCCceeeEEEec-CCCEEEEEeCCCCEEEE
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF-KKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTW  125 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw  125 (327)
                      +.+++|...|.+++|+-+|..|++|+.|+++.+|+++..+..... ..+|.+. |-.++|+| ....+++++.|.+|++|
T Consensus        14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~s-vdql~w~~~~~d~~atas~dk~ir~w   92 (313)
T KOG1407|consen   14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDS-VDQLCWDPKHPDLFATASGDKTIRIW   92 (313)
T ss_pred             HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcc-hhhheeCCCCCcceEEecCCceEEEE
Confidence            567789999999999999999999999999999999877554433 2567767 99999998 66789999999999999


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN  203 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~  203 (327)
                      |.+++++.........      -.-+.|+|+|++++++. |..|.+.|.++.+.....+....+..++|+.+ .+++...
T Consensus        93 d~r~~k~~~~i~~~~e------ni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~  166 (313)
T KOG1407|consen   93 DIRSGKCTARIETKGE------NINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTN  166 (313)
T ss_pred             EeccCcEEEEeeccCc------ceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEec
Confidence            9999999887766554      45688999999999998 99999999999999998888888999999866 6777777


Q ss_pred             CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--c
Q psy7482         204 EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--N  281 (327)
Q Consensus       204 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~  281 (327)
                      ..|+|.|......+++..+++|.....++.|  +|+|+++|+|+.|..+.+||+...-+++.+..+.-+|+.+.|+.  +
T Consensus       167 GlG~v~ILsypsLkpv~si~AH~snCicI~f--~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~  244 (313)
T KOG1407|consen  167 GLGCVEILSYPSLKPVQSIKAHPSNCICIEF--DPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGR  244 (313)
T ss_pred             CCceEEEEeccccccccccccCCcceEEEEE--CCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcc
Confidence            7899999999999999999999998889999  59999999999999999999999999999999999999999998  9


Q ss_pred             EEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         282 HLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       282 ~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +||+||+|-.|-|=+++++     ..+-...+.++...++|+|..
T Consensus       245 ~lASaSEDh~IDIA~vetG-----d~~~eI~~~~~t~tVAWHPk~  284 (313)
T KOG1407|consen  245 MLASASEDHFIDIAEVETG-----DRVWEIPCEGPTFTVAWHPKR  284 (313)
T ss_pred             eeeccCccceEEeEecccC-----CeEEEeeccCCceeEEecCCC
Confidence            9999999999999999998     556667788899999999975

>KOG0266|consensus

Probab=100.00  E-value=7.5e-36  Score=251.99  Aligned_cols=261  Identities=20%  Similarity=0.394  Sum_probs=221.6

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcC-C
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV-K  129 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~  129 (327)
                      +...|.++.|+++|+.+++++.|+.+++|+....+  ....+ .+|... |.+++|+|+++++++++.|++|++||+. .
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l-~~h~~~-v~~~~fs~d~~~l~s~s~D~tiriwd~~~~  235 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLREL-SGHTRG-VSDVAFSPDGSYLLSGSDDKTLRIWDLKDD  235 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccc-cccccc-eeeeEECCCCcEEEEecCCceEEEeeccCC
Confidence            36789999999999999999999999999997777  66666 788888 9999999999999999999999999994 3


Q ss_pred             CceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCC
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEES  206 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~  206 (327)
                      +..+..+.     .|...|.+++|+|+++++++|+ |++|++||++++++...+. |..+|++++|+++ .++++++.|+
T Consensus       236 ~~~~~~l~-----gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~  310 (456)
T KOG0266|consen  236 GRNLKTLK-----GHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDG  310 (456)
T ss_pred             CeEEEEec-----CCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCc
Confidence            45544443     2345699999999999999998 9999999999999999999 8899999999999 8899999999


Q ss_pred             cEEEEEcCCCc--eeEEeeecccc--eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEE---eee
Q psy7482         207 AITAYNLTDGS--HLWQIKASASR--IKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGL---ASH  279 (327)
Q Consensus       207 ~i~i~d~~~~~--~~~~~~~~~~~--v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~---~~~  279 (327)
                      .|++||+.++.  ++..+..+..+  ++.+.|+  |++.++++++.|+.+++||+..+..+..+.+|...+.++   ..+
T Consensus       311 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fs--p~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~  388 (456)
T KOG0266|consen  311 TIRVWDLETGSKLCLKLLSGAENSAPVTSVQFS--PNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLS  388 (456)
T ss_pred             cEEEEECCCCceeeeecccCCCCCCceeEEEEC--CCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEeccccc
Confidence            99999999998  56777766655  8999995  999999999999999999999999999999998754332   233


Q ss_pred             C--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         280 R--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       280 ~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +  .++++|+.|+.|++|++.+..  ..+.+.... ...+..++++|.
T Consensus       389 ~~~~~i~sg~~d~~v~~~~~~s~~--~~~~l~~h~-~~~~~~~~~~~~  433 (456)
T KOG0266|consen  389 TGGKLIYSGSEDGSVYVWDSSSGG--ILQRLEGHS-KAAVSDLSSHPT  433 (456)
T ss_pred             CCCCeEEEEeCCceEEEEeCCccc--hhhhhcCCC-CCceeccccCCC
Confidence            3  999999999999999999873  333333222 567778888774

>KOG0281|consensus

Probab=100.00  E-value=3.5e-38  Score=238.39  Aligned_cols=252  Identities=15%  Similarity=0.305  Sum_probs=215.3

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      ....|.|+.+.  ...+++|..|.+|+|||.++..+...+ .+|.++ |.|+.|.  .+.+++|+.|.+|++||.+++++
T Consensus       196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L-~GHtGS-VLCLqyd--~rviisGSSDsTvrvWDv~tge~  269 (499)
T KOG0281|consen  196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKIL-TGHTGS-VLCLQYD--ERVIVSGSSDSTVRVWDVNTGEP  269 (499)
T ss_pred             cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhh-hcCCCc-EEeeecc--ceEEEecCCCceEEEEeccCCch
Confidence            34679999884  668999999999999999999999998 999999 9999986  56999999999999999999998


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeE---ec-CCCceeEEEeecCceEEEeCCCCc
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQT---LK-SESKVHSVCFLNETTVCTGNEESA  207 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~---~~-~~~~i~~~~~~~~~~l~~~~~d~~  207 (327)
                      +..+-.+     ...|..+.|+  +.++++++ |.++.+||+.....+..   +. |...|+.+.|+. .++++++.|.+
T Consensus       270 l~tlihH-----ceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~-kyIVsASgDRT  341 (499)
T KOG0281|consen  270 LNTLIHH-----CEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRT  341 (499)
T ss_pred             hhHHhhh-----cceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc-ceEEEecCCce
Confidence            7665333     3448888887  34777777 99999999987654332   22 888999999964 69999999999


Q ss_pred             EEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEe
Q psy7482         208 ITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICIT  287 (327)
Q Consensus       208 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~  287 (327)
                      |++|++.+++.++++.+|...|-++.+    .++++++|+.|.+|++||+..|.++..+++|++-|.++.|..+.+++|+
T Consensus       342 ikvW~~st~efvRtl~gHkRGIAClQY----r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd~krIVSGa  417 (499)
T KOG0281|consen  342 IKVWSTSTCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA  417 (499)
T ss_pred             EEEEeccceeeehhhhcccccceehhc----cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeecCceeeecc
Confidence            999999999999999999999999886    7999999999999999999999999999999999999999999999999


Q ss_pred             cCCcEEEEEccCccCCCce-------eeeecCCCCceEEEEeCC
Q psy7482         288 SAGDLVVWELNEDVTREPQ-------RVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       288 ~dg~v~iw~~~~~~~~~~~-------~~~~~~~~~~i~~l~~~p  324 (327)
                      .||+|++||+..+.  .|.       ......|.++|..+.|..
T Consensus       418 YDGkikvWdl~aal--dpra~~~~~Cl~~lv~hsgRVFrLQFD~  459 (499)
T KOG0281|consen  418 YDGKIKVWDLQAAL--DPRAPASTLCLRTLVEHSGRVFRLQFDE  459 (499)
T ss_pred             ccceEEEEeccccc--CCcccccchHHHhhhhccceeEEEeecc
Confidence            99999999998874  331       112234677888887743

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=5.6e-35  Score=264.05  Aligned_cols=283  Identities=11%  Similarity=0.181  Sum_probs=226.4

Q ss_pred             CCeEEEEEccccccccc-----cccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC----e----EEEeEEecccCC
Q psy7482          33 DETVVLYDMVKRKQSGA-----LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW----Q----LEKLFKKAHKGT   99 (327)
Q Consensus        33 dg~v~~w~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~----~~~~~~~~~~~~   99 (327)
                      +|.+++|+..+.+....     +..|.+.|.+++|+|++++|++|+.|+.|++|+....    .    ....+  .+...
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~--~~~~~  534 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL--ASRSK  534 (793)
T ss_pred             hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEe--cccCc
Confidence            67788888776554332     4458999999999999999999999999999997532    1    11122  23344


Q ss_pred             ceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCC
Q psy7482         100 AVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKA  176 (327)
Q Consensus       100 ~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~  176 (327)
                       +.+++|++ ++.+|++++.||.|++||+.+++.+..+..     |...|.+++|+| ++.+|++++ |+.|++||++++
T Consensus       535 -v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~-----H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~  608 (793)
T PLN00181        535 -LSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKE-----HEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG  608 (793)
T ss_pred             -eeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecC-----CCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC
Confidence             89999987 578999999999999999998876554432     345699999997 778888887 999999999999


Q ss_pred             ceeeEecCCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCc-eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEE
Q psy7482         177 GVLQTLKSESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGS-HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAIT  253 (327)
Q Consensus       177 ~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~  253 (327)
                      ..+..+.....+.++.|++ + .++++|+.||.|++||+++.+ .+..+.+|...|.++.|   .++.+|++++.|+.|+
T Consensus       609 ~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f---~~~~~lvs~s~D~~ik  685 (793)
T PLN00181        609 VSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRF---VDSSTLVSSSTDNTLK  685 (793)
T ss_pred             cEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEE---eCCCEEEEEECCCEEE
Confidence            9888888778899999965 4 789999999999999998765 46778899999999999   4788999999999999


Q ss_pred             EEEcCC------CceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCC---------CceeeeecCCCCc
Q psy7482         254 AYNLTD------GSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTR---------EPQRVSATNDGCR  316 (327)
Q Consensus       254 i~d~~~------~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~---------~~~~~~~~~~~~~  316 (327)
                      +||+..      ..++..+.+|...+..++|++  .+|++|+.||.|++|+.......         ....+....+...
T Consensus       686 iWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  765 (793)
T PLN00181        686 LWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQF  765 (793)
T ss_pred             EEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcE
Confidence            999974      357788999999999999998  89999999999999997654100         0000111234457


Q ss_pred             eEEEEeCCCC
Q psy7482         317 FTCLAIRPPV  326 (327)
Q Consensus       317 i~~l~~~p~~  326 (327)
                      |.+++|+|+.
T Consensus       766 V~~v~ws~~~  775 (793)
T PLN00181        766 ISSVCWRGQS  775 (793)
T ss_pred             EEEEEEcCCC
Confidence            9999999873

>KOG0274|consensus

Probab=100.00  E-value=1.4e-35  Score=249.71  Aligned_cols=274  Identities=17%  Similarity=0.324  Sum_probs=247.7

Q ss_pred             CCccEEEEEeCCCEEEEecCCCeEEEEEccccccccc-cccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          13 HTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        13 h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      |...+.+..+...++++++.|++|++||..++..+.. +.+|.+.|.++++..-+..|++|+.|.++++||..++++...
T Consensus       207 ~~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~  286 (537)
T KOG0274|consen  207 DDHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHS  286 (537)
T ss_pred             CcchhhhheeecCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEE
Confidence            5677888888889999999999999999999998888 999999999999987788999999999999999999999999


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEE
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVV  170 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i  170 (327)
                      + .+|... |.++...  +..+++|+.|.+|++|++.++..+.....     |..+|.++..+  +.++++|+ |+.|.+
T Consensus       287 l-~gh~st-v~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~-----h~~~V~~v~~~--~~~lvsgs~d~~v~V  355 (537)
T KOG0274|consen  287 L-QGHTSS-VRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRG-----HTGPVNCVQLD--EPLLVSGSYDGTVKV  355 (537)
T ss_pred             e-cCCCce-EEEEEcc--CceEeeccCCceEEEEeccCcceEEEecc-----ccccEEEEEec--CCEEEEEecCceEEE
Confidence            9 899988 8888765  45788899999999999999988776653     34569999998  66777776 999999


Q ss_pred             EEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCC-ceeEEeeecccceEEEEEEecCCCcEEEEecC
Q psy7482         171 FSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDG-SHLWQIKASASRIKGLVFFSIPQETTVCTGNE  248 (327)
Q Consensus       171 ~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~  248 (327)
                      ||+.++++++.+. |...|.++.+.+...+++|+.|+.|++||+++. +++.++.+|..-+..+.+    .+++|++++.
T Consensus       356 W~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~----~~~~Lvs~~a  431 (537)
T KOG0274|consen  356 WDPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL----RDNFLVSSSA  431 (537)
T ss_pred             EEhhhceeeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc----ccceeEeccc
Confidence            9999999999998 999999998877689999999999999999999 999999999998877774    7899999999


Q ss_pred             CCeEEEEEcCCCceeEEeec-ccCceEEEeeeCcEEEEEecCCcEEEEEccCcc
Q psy7482         249 ESAITAYNLTDGSHLWHIKA-SASRIKGLASHRNHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       249 d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      |+.|++||..+++++..+.+ |...|..+++....+++++.||.+++||++.+.
T Consensus       432 D~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~~~~il~s~~~~~~~l~dl~~~~  485 (537)
T KOG0274|consen  432 DGTIKLWDAEEGECLRTLEGRHVGGVSALALGKEEILCSSDDGSVKLWDLRSGT  485 (537)
T ss_pred             cccEEEeecccCceeeeeccCCcccEEEeecCcceEEEEecCCeeEEEecccCc
Confidence            99999999999999999999 678999998887888889999999999999883

>KOG0288|consensus

Probab=100.00  E-value=4e-37  Score=237.00  Aligned_cols=277  Identities=20%  Similarity=0.308  Sum_probs=242.2

Q ss_pred             eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      +.+..|.+.|..+.|  +...|++|+.|..|++|+...++  .+.++.+..++|+++.|.++++++++++.|+.+++|++
T Consensus       169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnv  248 (459)
T KOG0288|consen  169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNV  248 (459)
T ss_pred             hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeec
Confidence            456789999999999  55899999999999999987666  67788888999999999999999999999999999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      .+.+...++ .+|.+. |+++.|......+++|+.|.+|++||+....+.........      +..+..+  ...+++|
T Consensus       249 d~~r~~~TL-sGHtdk-Vt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~------cnDI~~~--~~~~~Sg  318 (459)
T KOG0288|consen  249 DSLRLRHTL-SGHTDK-VTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQ------CNDIVCS--ISDVISG  318 (459)
T ss_pred             cchhhhhhh-cccccc-eeeehhhccccceeeccccchhhhhhhhhhheecccccccc------ccceEec--ceeeeec
Confidence            999999999 899998 99999988766699999999999999998877665544443      6666665  4566677


Q ss_pred             c-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeec----ccceEEEEEEec
Q psy7482         164 I-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKAS----ASRIKGLVFFSI  237 (327)
Q Consensus       164 ~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~s  237 (327)
                      . |+.|++||.++.......+..+.|+++..+++ ..+++++.|.++.+.|+++.+....+...    ....+.+.|  |
T Consensus       319 H~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvf--S  396 (459)
T KOG0288|consen  319 HFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVF--S  396 (459)
T ss_pred             ccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEE--C
Confidence            5 99999999999999999998889999999999 66888899999999999999887776532    224778888  5


Q ss_pred             CCCcEEEEecCCCeEEEEEcCCCceeEEeecccCc--eEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         238 PQETTVCTGNEESAITAYNLTDGSHLWHIKASASR--IKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      |++.|+++|+.||.|+||++.++++...+.....+  |++++|+|  ..+++++.++.+.+|.
T Consensus       397 pd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  397 PDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             CCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence            99999999999999999999999998888766544  99999999  8999999999999994

>KOG0640|consensus

Probab=100.00  E-value=5.1e-36  Score=223.38  Aligned_cols=285  Identities=19%  Similarity=0.280  Sum_probs=235.1

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc------------------ccccccccccccEEEEEECCCCCeE
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR------------------KQSGALMQHEGTITCLKFTPEGSHL   69 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~------------------~~~~~~~~~~~~v~~~~~~~~~~~l   69 (327)
                      +..|++++.+-+|  ||.++|||+.|..|+|.|++..                  -.++++..|.++|+++.|+|....|
T Consensus       108 lt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~IL  187 (430)
T KOG0640|consen  108 LTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETIL  187 (430)
T ss_pred             EeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheE
Confidence            4479999999999  9999999999999999998721                  2356788899999999999999999


Q ss_pred             EEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          70 ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        70 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      ++|+.|++|+++|+......+.++....-.+|.++.|+|.|.+|+.|.....+++||+++-++.....  ....|.+.|+
T Consensus       188 iS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan--Pd~qht~ai~  265 (430)
T KOG0640|consen  188 ISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN--PDDQHTGAIT  265 (430)
T ss_pred             EeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC--ccccccccee
Confidence            99999999999999765443333222333349999999999999999999999999999887644332  3455677899


Q ss_pred             EEEEccCCcEEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee
Q psy7482         150 SVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~  224 (327)
                      ++.+++.+++.++++ ||.|++||--+++++.++.   ....|.+..|..+ .++++.+.|..+++|.+.+++++.++.+
T Consensus       266 ~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtG  345 (430)
T KOG0640|consen  266 QVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTG  345 (430)
T ss_pred             EEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEec
Confidence            999999999999998 9999999999999999988   3568999999998 8899999999999999999999988865


Q ss_pred             cc-----cceEEEEEEecCCCcEEEEecC-CCeEEEEEcCCCceeEEee-cccCceEEEeeeC--cEEEEEecCCcEEEE
Q psy7482         225 SA-----SRIKGLVFFSIPQETTVCTGNE-ESAITAYNLTDGSHLWHIK-ASASRIKGLASHR--NHLICITSAGDLVVW  295 (327)
Q Consensus       225 ~~-----~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~l~~~~~dg~v~iw  295 (327)
                      -.     .--+...|.  ....+++.-.+ .+.+.-||.++...+..+. +|++.++.+.-+|  .-+++++.|-.+|+|
T Consensus       346 Ag~tgrq~~rtqAvFN--htEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFW  423 (430)
T KOG0640|consen  346 AGTTGRQKHRTQAVFN--HTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFW  423 (430)
T ss_pred             CCcccchhhhhhhhhc--CccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeee
Confidence            31     112334453  55666665443 4679999999987665543 7999999999999  899999999999999


Q ss_pred             Ecc
Q psy7482         296 ELN  298 (327)
Q Consensus       296 ~~~  298 (327)
                      --.
T Consensus       424 yrr  426 (430)
T KOG0640|consen  424 YRR  426 (430)
T ss_pred             eec
Confidence            754

>KOG0306|consensus

Probab=100.00  E-value=1.4e-34  Score=238.54  Aligned_cols=310  Identities=16%  Similarity=0.253  Sum_probs=259.7

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      ..+.+.||...|+++.|  .|..||+||.|+.|.+||+-...-...+.+|++.|+.+-|..+.+++++.+.|+.|++||+
T Consensus        99 ~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL  178 (888)
T KOG0306|consen   99 ILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDL  178 (888)
T ss_pred             eeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEec
Confidence            45667799999999999  8999999999999999999988888999999999999999988899999999999999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC------------------------c--------
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG------------------------R--------  131 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~------------------------~--------  131 (327)
                      ++..+..+. ..|.+. ++.+++.+  +.+++++.|+.+++|++...                        +        
T Consensus       179 ~tqhCf~Th-vd~r~E-iw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~  254 (888)
T KOG0306|consen  179 ETQHCFETH-VDHRGE-IWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDF  254 (888)
T ss_pred             ccceeeeEE-ecccce-EEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecC
Confidence            999998888 888888 99999986  68999999999999998100                        0        


Q ss_pred             --------------------------------------------------------------------------------
Q psy7482         132 --------------------------------------------------------------------------------  131 (327)
Q Consensus       132 --------------------------------------------------------------------------------  131 (327)
                                                                                                      
T Consensus       255 s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~  334 (888)
T KOG0306|consen  255 SDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGT  334 (888)
T ss_pred             cccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCc
Confidence                                                                                            


Q ss_pred             e------------eeeeec--c-----------ccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecCCC
Q psy7482         132 S------------AYITNL--S-----------SYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSES  186 (327)
Q Consensus       132 ~------------~~~~~~--~-----------~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~  186 (327)
                      .            ...+..  .           ....|...|++++++.+...++++..+.+.+|+..+.+++.++... 
T Consensus       335 ~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~-  413 (888)
T KOG0306|consen  335 ENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCG-  413 (888)
T ss_pred             ceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccc-
Confidence            0            000000  0           0012345688999999998999999999999999999999999865 


Q ss_pred             ceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC------
Q psy7482         187 KVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD------  259 (327)
Q Consensus       187 ~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~------  259 (327)
                      .+.+..|-|. .++++|...|.+.+||+.+...+.++++|.+.+.+++..  ||++.+++|+.|.+|++||..-      
T Consensus       414 y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~--pD~~g~vT~saDktVkfWdf~l~~~~~g  491 (888)
T KOG0306|consen  414 YILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLS--PDNKGFVTGSADKTVKFWDFKLVVSVPG  491 (888)
T ss_pred             cEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeec--CCCCceEEecCCcEEEEEeEEEEeccCc
Confidence            7888889897 899999999999999999998888889999999999984  8999999999999999997521      


Q ss_pred             ------------------------------------------------CceeEEeecccCceEEEeeeC--cEEEEEecC
Q psy7482         260 ------------------------------------------------GSHLWHIKASASRIKGLASHR--NHLICITSA  289 (327)
Q Consensus       260 ------------------------------------------------~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d  289 (327)
                                                                      -+....+.+|.-||.++..+|  .+++|||.|
T Consensus       492 t~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSAD  571 (888)
T KOG0306|consen  492 TQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSAD  571 (888)
T ss_pred             ccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCC
Confidence                                                            111123558999999999999  999999999


Q ss_pred             CcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         290 GDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       290 g~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      .+|+||-++.+.    .......|...|.++.|-|+.
T Consensus       572 KnVKiWGLdFGD----CHKS~fAHdDSvm~V~F~P~~  604 (888)
T KOG0306|consen  572 KNVKIWGLDFGD----CHKSFFAHDDSVMSVQFLPKT  604 (888)
T ss_pred             CceEEeccccch----hhhhhhcccCceeEEEEcccc
Confidence            999999999984    223345677889999999964

>KOG0268|consensus

Probab=100.00  E-value=1.9e-36  Score=229.75  Aligned_cols=277  Identities=15%  Similarity=0.276  Sum_probs=233.2

Q ss_pred             eeccCCccEEEEEeCC---CEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           9 VTHSHTASVRSVAATS---KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         9 ~~~~h~~~v~~~~~~~---~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      .+.||.+.|.|++-+.   ..+|+|+.||.|+|||+.+.++..+++.|.+.|..+++..  ..+++++.|.+|+.|.++.
T Consensus        61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~  138 (433)
T KOG0268|consen   61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG  138 (433)
T ss_pred             hccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC
Confidence            3469999999999933   4689999999999999999999999999999999999986  6789999999999999875


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-EEEee-
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-LYAIP-  163 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-  163 (327)
                       .+.+++   +....+..+.-+..+..+++++.  .|.|||.+...++..+.....     .+.++.|+|... +|+++ 
T Consensus       139 -~p~~ti---lg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~D-----ti~svkfNpvETsILas~~  207 (433)
T KOG0268|consen  139 -PPLHTI---LGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGAD-----SISSVKFNPVETSILASCA  207 (433)
T ss_pred             -Ccceee---eccccccccccccccccccccCc--eeeecccccCCccceeecCCC-----ceeEEecCCCcchheeeec
Confidence             355555   33333778887777788998886  599999987777766655543     499999999664 55665 


Q ss_pred             cCCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc-eeEEeeecccceEEEEEEecCCCc
Q psy7482         164 IQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS-HLWQIKASASRIKGLVFFSIPQET  241 (327)
Q Consensus       164 ~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~s~~~~  241 (327)
                      +|+.|.+||++++.+++.+......+.++|+|+ -.+++|++|..++.||++..+ ++....+|...|.++.|  ||.|+
T Consensus       208 sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdf--sptG~  285 (433)
T KOG0268|consen  208 SDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDF--SPTGQ  285 (433)
T ss_pred             cCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEecc--CCCcc
Confidence            499999999999999999988888899999998 568899999999999998754 57778999999999999  49999


Q ss_pred             EEEEecCCCeEEEEEcCCCceeEEeec-ccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         242 TVCTGNEESAITAYNLTDGSHLWHIKA-SASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      -+++||.|.+|+||....+.....+.. -...|.++.|+.  +++++||+|+.|++|.....
T Consensus       286 EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~As  347 (433)
T KOG0268|consen  286 EFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKAS  347 (433)
T ss_pred             hhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchh
Confidence            999999999999999988764433321 124789999998  99999999999999998765

>KOG0282|consensus

Probab=100.00  E-value=1.7e-36  Score=237.96  Aligned_cols=269  Identities=15%  Similarity=0.234  Sum_probs=228.4

Q ss_pred             cccccccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCC-CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC
Q psy7482          44 RKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS-WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT  121 (327)
Q Consensus        44 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  121 (327)
                      .+.+.++.+|+..|+++.|.| .+.+|++++.|+.|+||++.. +++++++ .+|... |..++|+++|..+++++.|+.
T Consensus       204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf-~gH~k~-Vrd~~~s~~g~~fLS~sfD~~  281 (503)
T KOG0282|consen  204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTF-KGHRKP-VRDASFNNCGTSFLSASFDRF  281 (503)
T ss_pred             HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhh-hcchhh-hhhhhccccCCeeeeeeccee
Confidence            355678899999999999999 889999999999999999976 8899999 899988 999999999999999999999


Q ss_pred             EEEEEcCCCceeeeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-c
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-T  197 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~  197 (327)
                      |++||.++|++...+.....      +.|+.|.|++ +.+++|. |+.|+.||+++++.++.+. |-+.|..+.|-++ .
T Consensus       282 lKlwDtETG~~~~~f~~~~~------~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~  355 (503)
T KOG0282|consen  282 LKLWDTETGQVLSRFHLDKV------PTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGR  355 (503)
T ss_pred             eeeeccccceEEEEEecCCC------ceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCc
Confidence            99999999999988887776      9999999998 6666665 9999999999999999998 7899999999998 8


Q ss_pred             eEEEeCCCCcEEEEEcCCCceeEEee-ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc---eeEEeeccc--C
Q psy7482         198 TVCTGNEESAITAYNLTDGSHLWQIK-ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS---HLWHIKASA--S  271 (327)
Q Consensus       198 ~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~--~  271 (327)
                      ++++.+.|+.+++|+.+...++..+. .+.....++..+  |++.+++.-+.|+.|.+|.+...-   .-..+++|.  +
T Consensus       356 rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~--P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaG  433 (503)
T KOG0282|consen  356 RFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLH--PNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAG  433 (503)
T ss_pred             eEeeeccCccEEEEEcCCCccchhhcchhhccCcceecC--CCCCeehhhccCceEEEEecccccccCHhhhhcceeccC
Confidence            89999999999999998876655442 233345567765  999999999999999999976543   335677775  3


Q ss_pred             ceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         272 RIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       272 ~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      --..+.|+|  .+|++|+.||.+.+||.++..  ....  ...|..+++.+.|+|..
T Consensus       434 ys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k--l~~~--lkah~~~ci~v~wHP~e  486 (503)
T KOG0282|consen  434 YSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTK--LVSK--LKAHDQPCIGVDWHPVE  486 (503)
T ss_pred             ceeeEEEcCCCCeEEeecCCccEEEeechhhh--hhhc--cccCCcceEEEEecCCC
Confidence            455678999  999999999999999999872  2222  23356789999999964

>KOG0294|consensus

Probab=100.00  E-value=5.5e-34  Score=212.72  Aligned_cols=284  Identities=19%  Similarity=0.286  Sum_probs=235.8

Q ss_pred             EEEEecCCCeEEEEEcccc------------ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482          26 LAASSGADETVVLYDMVKR------------KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      .|++|+....|.=+++...            .+...+..|.+++++++.+  +.++|+|+.|-+|+|||+........+ 
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~l-   79 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGIL-   79 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcce-
Confidence            3667777777766665321            2356677899999999996  899999999999999999998888888 


Q ss_pred             ecccCCceeeEEEecCCC--EEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-cCCeEEE
Q psy7482          94 KAHKGTAVNHISIHPSGK--LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-IQNKAVV  170 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i  170 (327)
                      ..|.+. |+++.|.++-.  .|++|+.||.|.+|+...-+.+..++.+     ...|+.++.+|.+++.++. .|+.++.
T Consensus        80 l~Hags-itaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H-----~~~Vt~lsiHPS~KLALsVg~D~~lr~  153 (362)
T KOG0294|consen   80 LSHAGS-ITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAH-----KGQVTDLSIHPSGKLALSVGGDQVLRT  153 (362)
T ss_pred             eccccc-eEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeeccc-----ccccceeEecCCCceEEEEcCCceeee
Confidence            888888 99999998654  8999999999999998877665544333     3449999999999876554 5999999


Q ss_pred             EEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC
Q psy7482         171 FSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE  249 (327)
Q Consensus       171 ~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d  249 (327)
                      ||+-.|+.-..++.....+.+.|+|. .+++.+..+ .|-+|.+.+......+... ..+.++.|   -++..|++|..|
T Consensus       154 WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~-~r~l~~~~---l~~~~L~vG~d~  228 (362)
T KOG0294|consen  154 WNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENP-KRILCATF---LDGSELLVGGDN  228 (362)
T ss_pred             ehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhcc-ccceeeee---cCCceEEEecCC
Confidence            99999998887776666666999998 556666554 6889999887766555433 45777777   789999999999


Q ss_pred             CeEEEEEcCCCceeEEeecccCceEEEeeeC----cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeC
Q psy7482         250 SAITAYNLTDGSHLWHIKASASRIKGLASHR----NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIR  323 (327)
Q Consensus       250 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~  323 (327)
                      +.|.+||..+..++..+.+|...|.++.+-.    .+|+++|.||.|+|||++....+.|..+...+.+.+++|+...
T Consensus       229 ~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~~~RltCl~~~  306 (362)
T KOG0294|consen  229 EWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNTNVRLTCLRVK  306 (362)
T ss_pred             ceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccccCCcceeEEeecCCccceeeeh
Confidence            9999999999999999999999999999544    6999999999999999999877888999999999999999864

>KOG0277|consensus

Probab=100.00  E-value=6.4e-35  Score=211.52  Aligned_cols=258  Identities=14%  Similarity=0.245  Sum_probs=213.8

Q ss_pred             CCCeEEEEEccccccccccc--cccccEEEEEECCC-CCeEEEecCCCcEEEEEcCC-CeEEEeEEecccCCceeeEEEe
Q psy7482          32 ADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGS-WQLEKLFKKAHKGTAVNHISIH  107 (327)
Q Consensus        32 ~dg~v~~w~~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~  107 (327)
                      ..|.+.|-++...+-+....  .-++.+..++|+++ .+.+++++.||++++||+.. ..++..+ +.|... |.++.|+
T Consensus        36 G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~-kEH~~E-V~Svdwn  113 (311)
T KOG0277|consen   36 GNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKF-KEHKRE-VYSVDWN  113 (311)
T ss_pred             cCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHH-Hhhhhh-eEEeccc
Confidence            36889999986554444433  24678999999995 55788999999999999743 3566777 788887 9999999


Q ss_pred             c-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC-CcEEEeec-CCeEEEEEecCCceeeEec-
Q psy7482         108 P-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE-GLLYAIPI-QNKAVVFSVEKAGVLQTLK-  183 (327)
Q Consensus       108 ~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~-~~~i~i~d~~~~~~~~~~~-  183 (327)
                      + ++..+++++.|++|++|+...++.+.++..     |...|....|+|. .+++++++ |+.+++||++.......+. 
T Consensus       114 ~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g-----h~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~a  188 (311)
T KOG0277|consen  114 TVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNG-----HNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEA  188 (311)
T ss_pred             cccceeEEeeccCCceEeecCCCCcceEeecC-----CccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEe
Confidence            9 667788889999999999988877766543     3455999999994 56788776 9999999998654444466 


Q ss_pred             CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCc-eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482         184 SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGS-HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       184 ~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                      |...+.++.|+.-  ..+++|+.|+.|+.||+++.+ ++.++.+|.-.|+.++|+| .....|++++.|-+++|||...+
T Consensus       189 h~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sp-h~~~lLaSasYDmT~riw~~~~~  267 (311)
T KOG0277|consen  189 HNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSP-HHASLLASASYDMTVRIWDPERQ  267 (311)
T ss_pred             ccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCc-chhhHhhhccccceEEecccccc
Confidence            8889999999874  789999999999999998754 5888999999999999975 56788999999999999998855


Q ss_pred             c-eeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEc
Q psy7482         261 S-HLWHIKASASRIKGLASHR---NHLICITSAGDLVVWEL  297 (327)
Q Consensus       261 ~-~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~  297 (327)
                      . .+.+...|++-+..+.|++   .++|+.+.|+.++||+.
T Consensus       268 ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  268 DSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             hhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence            4 6777888999999999998   99999999999999985

>KOG0643|consensus

Probab=100.00  E-value=2.2e-33  Score=205.00  Aligned_cols=267  Identities=18%  Similarity=0.233  Sum_probs=221.5

Q ss_pred             ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcC
Q psy7482          49 ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV  128 (327)
Q Consensus        49 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  128 (327)
                      .+++|+.+++.+.++.+|.+|++++.|.+..+|-..+|+.+.++ .+|.+. |++++.+.+.+.+++|+.|.++++||++
T Consensus         5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty-~GHtGa-vW~~Did~~s~~liTGSAD~t~kLWDv~   82 (327)
T KOG0643|consen    5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTY-DGHTGA-VWCCDIDWDSKHLITGSADQTAKLWDVE   82 (327)
T ss_pred             ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeee-cCCCce-EEEEEecCCcceeeeccccceeEEEEcC
Confidence            46789999999999999999999999999999999899999999 999999 9999999999999999999999999999


Q ss_pred             CCceeeeeeccccCccccceEEEEEccCCcEEEeecC------CeEEEEEec-------CCceeeEec-CCCceeEEEee
Q psy7482         129 KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ------NKAVVFSVE-------KAGVLQTLK-SESKVHSVCFL  194 (327)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~i~i~d~~-------~~~~~~~~~-~~~~i~~~~~~  194 (327)
                      +|+++...+....      |..+.|+++|++++.+.|      +.|.++|++       ..++...+. +.+.++.+-|.
T Consensus        83 tGk~la~~k~~~~------Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg  156 (327)
T KOG0643|consen   83 TGKQLATWKTNSP------VKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWG  156 (327)
T ss_pred             CCcEEEEeecCCe------eEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeec
Confidence            9999998888776      999999999998887753      578999998       345555555 77899999999


Q ss_pred             cC-ceEEEeCCCCcEEEEEcCCCce-eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCc
Q psy7482         195 NE-TTVCTGNEESAITAYNLTDGSH-LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASR  272 (327)
Q Consensus       195 ~~-~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  272 (327)
                      |- ..+++|.++|.|.+||.++++. +...+.|...|+.++++  ++..++++++.|.+-++||..+-+.+.++..- .|
T Consensus       157 ~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s--~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te-~P  233 (327)
T KOG0643|consen  157 PLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFS--RDRTYFITGSKDTTAKLVDVRTLEVLKTYTTE-RP  233 (327)
T ss_pred             ccCCEEEEecCCCcEEEEEcccCceeeechhhhcccccccccc--CCcceEEecccCccceeeeccceeeEEEeeec-cc
Confidence            97 8999999999999999999855 55567899999999994  99999999999999999999999999988854 49


Q ss_pred             eEEEeeeC--cEEEEEecCCc--EEEEEccCccCC-------Cceee-eecCCCCceEEEEeCCCC
Q psy7482         273 IKGLASHR--NHLICITSAGD--LVVWELNEDVTR-------EPQRV-SATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       273 v~~~~~~~--~~l~~~~~dg~--v~iw~~~~~~~~-------~~~~~-~~~~~~~~i~~l~~~p~~  326 (327)
                      |++.+++|  ..++.|+.-..  |.-=+.+.+..+       ..+.+ ....|-++|++++|||+-
T Consensus       234 vN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdG  299 (327)
T KOG0643|consen  234 VNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDG  299 (327)
T ss_pred             ccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCC
Confidence            99999999  56655553222  211111111000       00111 223466899999999973

>KOG0772|consensus

Probab=100.00  E-value=6.1e-34  Score=225.55  Aligned_cols=287  Identities=16%  Similarity=0.238  Sum_probs=227.2

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc----cccccc-cccccEEEEEECCCCCeEEEecCCCcE
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK----QSGALM-QHEGTITCLKFTPEGSHLISCSDDGSI   78 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~----~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i   78 (327)
                      ..+.+++|+..|.++++  .|-.|++|+.|.+|++||+....    ..+.+. .....|.+++|++.|..|++.+.....
T Consensus       159 hEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa  238 (641)
T KOG0772|consen  159 HEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQA  238 (641)
T ss_pred             ceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcce
Confidence            44567799999999999  89999999999999999987542    122222 244569999999999999988888899


Q ss_pred             EEEEcCCCeEEEeE-----------EecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCc-eeeeeeccccCccc
Q psy7482          79 AIFRVGSWQLEKLF-----------KKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGR-SAYITNLSSYGVGF  145 (327)
Q Consensus        79 ~iw~~~~~~~~~~~-----------~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~  145 (327)
                      +++|-...+.....           .++|... +++.+|+|. ...+++++.||++++||+...+ ....+.........
T Consensus       239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~-lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~R  317 (641)
T KOG0772|consen  239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAE-LTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKR  317 (641)
T ss_pred             eEEccCCceeeeeeccchhhhhhhccCCceee-eeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcc
Confidence            99997655544333           2567777 999999994 5679999999999999997644 33444444444445


Q ss_pred             cceEEEEEccCCcEEEeec-CCeEEEEEecCCce--eeEec--CCC--ceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc
Q psy7482         146 ENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV--LQTLK--SES--KVHSVCFLNE-TTVCTGNEESAITAYNLTDGS  217 (327)
Q Consensus       146 ~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~--~~~~~--~~~--~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~  217 (327)
                      -++..++|+|+++++|+|. ||.|.+|+..+...  ...++  |..  .|+++.|+++ ++|++=+.|+++++||+++.+
T Consensus       318 v~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k  397 (641)
T KOG0772|consen  318 VPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK  397 (641)
T ss_pred             cCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc
Confidence            5689999999999999987 99999999865432  22222  544  8999999999 889999999999999998764


Q ss_pred             -eeEEeee--cccceEEEEEEecCCCcEEEEecC------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEE
Q psy7482         218 -HLWQIKA--SASRIKGLVFFSIPQETTVCTGNE------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICI  286 (327)
Q Consensus       218 -~~~~~~~--~~~~v~~~~~~~s~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~  286 (327)
                       ++....+  ..-+-+.++|  ||+.++|++|..      .|.+.+||..+.+.+..+.-....|..+.|+|  +.|+.|
T Consensus       398 kpL~~~tgL~t~~~~tdc~F--SPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~g  475 (641)
T KOG0772|consen  398 KPLNVRTGLPTPFPGTDCCF--SPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAG  475 (641)
T ss_pred             cchhhhcCCCccCCCCcccc--CCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeee
Confidence             3444333  2234567888  599999999863      47899999999999999988888999999999  888889


Q ss_pred             ecCCcEEEE
Q psy7482         287 TSAGDLVVW  295 (327)
Q Consensus       287 ~~dg~v~iw  295 (327)
                      +.||++++|
T Consensus       476 sgdG~~~vy  484 (641)
T KOG0772|consen  476 SGDGTAHVY  484 (641)
T ss_pred             cCCCceEEE
Confidence            999999886

>KOG0293|consensus

Probab=100.00  E-value=1.4e-34  Score=223.28  Aligned_cols=247  Identities=16%  Similarity=0.295  Sum_probs=208.8

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccccccccccc-ccccEEEEEECCCCCeEEEecCCCcE
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTPEGSHLISCSDDGSI   78 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i   78 (327)
                      +++.+++.  ||..+|..+.|  |.++|++++.|..+++||+.+|.....+.. +...+.+++|.|||..+++|+.|+.+
T Consensus       259 ~kl~~tlv--gh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i  336 (519)
T KOG0293|consen  259 FKLKKTLV--GHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTI  336 (519)
T ss_pred             eeeeeeee--cccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcE
Confidence            34455544  99999999999  999999999999999999999998887763 46889999999999999999999999


Q ss_pred             EEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc
Q psy7482          79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL  158 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  158 (327)
                      ..||++. +..... .+...+.|.+++..+||+++++.+.|..|++++.++...........      ++++++.+.+++
T Consensus       337 ~~wdlDg-n~~~~W-~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~------~its~~iS~d~k  408 (519)
T KOG0293|consen  337 IMWDLDG-NILGNW-EGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQ------PITSFSISKDGK  408 (519)
T ss_pred             EEecCCc-chhhcc-cccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccC------ceeEEEEcCCCc
Confidence            9999974 555555 44444559999999999999999999999999988766554444443      399999999999


Q ss_pred             EEEeec-CCeEEEEEecCCceeeEec-CC--CceeEEEeec--CceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482         159 LYAIPI-QNKAVVFSVEKAGVLQTLK-SE--SKVHSVCFLN--ETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL  232 (327)
Q Consensus       159 ~l~~~~-~~~i~i~d~~~~~~~~~~~-~~--~~i~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  232 (327)
                      ++.+.- +..+.+||++..+.+..+. |.  ..+..-||-.  +.++++|++|+.|+||+..+++++..+.+|...|+++
T Consensus       409 ~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcV  488 (519)
T KOG0293|consen  409 LALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCV  488 (519)
T ss_pred             EEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEE
Confidence            998886 9999999999887777665 32  3344555643  3789999999999999999999999999999999999


Q ss_pred             EEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         233 VFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      +|+| .+...+|+++.||+|+||....
T Consensus       489 swNP-~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  489 SWNP-ADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             ecCC-CCHHHhhccCCCCeEEEecCCc
Confidence            9986 6788899999999999998754

>KOG0305|consensus

Probab=100.00  E-value=1.5e-33  Score=229.29  Aligned_cols=266  Identities=17%  Similarity=0.265  Sum_probs=229.4

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEec-ccCCce
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA-HKGTAV  101 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~~~v  101 (327)
                      ..+.||+|. ...|++|+..+++.......+...|+++.|+++|.+|++|..+|.|.|||..+.+.+..+ .. |... |
T Consensus       187 s~n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~-~~~h~~r-v  263 (484)
T KOG0305|consen  187 SANVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTL-RGSHASR-V  263 (484)
T ss_pred             cCCeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccc-cCCcCce-e
Confidence            556788776 557999999988866555555889999999999999999999999999999998888888 56 6766 9


Q ss_pred             eeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceee
Q psy7482         102 NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQ  180 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~  180 (327)
                      -+++|.  +..+.+|+.++.|..+|++..+.... .   ...|...|..+.|++++.++|+|+ |+.+.|||....++..
T Consensus       264 g~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~-~---~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~  337 (484)
T KOG0305|consen  264 GSLAWN--SSVLSSGSRDGKILNHDVRISQHVVS-T---LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKF  337 (484)
T ss_pred             EEEecc--CceEEEecCCCcEEEEEEecchhhhh-h---hhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccE
Confidence            999998  66899999999999999998776544 2   233456699999999999999998 9999999998777777


Q ss_pred             Eec-CCCceeEEEeecC--ceEEEeC--CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEE--ecCCCeEE
Q psy7482         181 TLK-SESKVHSVCFLNE--TTVCTGN--EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCT--GNEESAIT  253 (327)
Q Consensus       181 ~~~-~~~~i~~~~~~~~--~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~--~~~d~~i~  253 (327)
                      .+. |...|.+++|+|-  ++||+|+  .|++|++||..+++.+..+... ..|..+.|+  +..+-|++  |..++.|.
T Consensus       338 ~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtg-sQVcsL~Ws--k~~kEi~sthG~s~n~i~  414 (484)
T KOG0305|consen  338 TFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTG-SQVCSLIWS--KKYKELLSTHGYSENQIT  414 (484)
T ss_pred             EEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccC-CceeeEEEc--CCCCEEEEecCCCCCcEE
Confidence            776 9999999999995  8899865  7999999999999998887644 569999996  66544443  55678999


Q ss_pred             EEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         254 AYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       254 i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ||+..+.+++..+.+|...|..++++|  ..+++|+.|.++++|++-..
T Consensus       415 lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  415 LWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence            999999999999999999999999999  99999999999999999775

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=1.6e-32  Score=232.04  Aligned_cols=268  Identities=16%  Similarity=0.238  Sum_probs=197.6

Q ss_pred             EEeCCCEEEE------ecCCCeEEEEEccccccccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCCCe-----
Q psy7482          20 VAATSKLAAS------SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQ-----   87 (327)
Q Consensus        20 ~~~~~~~l~~------~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~-----   87 (327)
                      ++.+++++|.      |+.++.|++|+......+..+.+|.+.|.+++|+|+ +++|++|+.|+.|++||+.++.     
T Consensus        34 ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~  113 (568)
T PTZ00420         34 IACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKE  113 (568)
T ss_pred             EeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccc
Confidence            3345555543      567889999998887788889999999999999996 7899999999999999997542     


Q ss_pred             ---EEEeEEecccCCceeeEEEecCCCE-EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          88 ---LEKLFKKAHKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        88 ---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                         ....+ .+|... |.+++|+|++.. +++++.|+.|++||+++++....+...      ..+.+++|+|+|.+|+++
T Consensus       114 i~~p~~~L-~gH~~~-V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~------~~V~SlswspdG~lLat~  185 (568)
T PTZ00420        114 IKDPQCIL-KGHKKK-ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMP------KKLSSLKWNIKGNLLSGT  185 (568)
T ss_pred             cccceEEe-ecCCCc-EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecC------CcEEEEEECCCCCEEEEE
Confidence               22345 677777 999999998875 578899999999999988765544322      249999999999999988


Q ss_pred             c-CCeEEEEEecCCceeeEec-CCCceeEE-----EeecC-ceEEEeCCCC----cEEEEEcCC-CceeEEeeecc--cc
Q psy7482         164 I-QNKAVVFSVEKAGVLQTLK-SESKVHSV-----CFLNE-TTVCTGNEES----AITAYNLTD-GSHLWQIKASA--SR  228 (327)
Q Consensus       164 ~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~-----~~~~~-~~l~~~~~d~----~i~i~d~~~-~~~~~~~~~~~--~~  228 (327)
                      + |+.|++||+++++.+..+. |.+.+...     .|+++ +++++++.++    .|++||+++ .+++..+..+.  +.
T Consensus       186 s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~  265 (568)
T PTZ00420        186 CVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAP  265 (568)
T ss_pred             ecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccc
Confidence            7 9999999999999988887 65554332     23466 7888876664    799999985 55565543332  22


Q ss_pred             eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee--cccCceEEEeeeCcEEEEEecCCcEEEEEcc
Q psy7482         229 IKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK--ASASRIKGLASHRNHLICITSAGDLVVWELN  298 (327)
Q Consensus       229 v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~  298 (327)
                      +.. .+. .+++.++++|+.|+.|++|++..+. +..+.  .+..+..+++|.|+..+=...--..|++.+.
T Consensus       266 L~p-~~D-~~tg~l~lsGkGD~tIr~~e~~~~~-~~~l~~~~s~~p~~g~~f~Pkr~~dv~~cEi~R~~kl~  334 (568)
T PTZ00420        266 LIP-HYD-ESTGLIYLIGKGDGNCRYYQHSLGS-IRKVNEYKSCSPFRSFGFLPKQICDVYKCEIGRVYKNE  334 (568)
T ss_pred             eEE-eee-CCCCCEEEEEECCCeEEEEEccCCc-EEeecccccCCCccceEEccccccCchhhhHhHHhhhc
Confidence            222 222 2668899999999999999998764 22222  2557889999999433322222234455543

>KOG0289|consensus

Probab=100.00  E-value=3.7e-33  Score=216.61  Aligned_cols=276  Identities=16%  Similarity=0.261  Sum_probs=239.6

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      ..+.++..  ..+.+++|+.|..+.++|...++.+..++||...|+.+.|+|+...+++++.|..|++|...........
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~  299 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSS  299 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcccc
Confidence            45667766  3488999999999999999999999999999999999999999999999999999999999776655555


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEE
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVF  171 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~  171 (327)
                       ..|... |+.+..+|.|.||++++.||+..+.|++++..+........   .-.+++.+|+|||.+|.+|. |+.+++|
T Consensus       300 -~~h~~~-V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s---~v~~ts~~fHpDgLifgtgt~d~~vkiw  374 (506)
T KOG0289|consen  300 -RPHEEP-VTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETS---DVEYTSAAFHPDGLIFGTGTPDGVVKIW  374 (506)
T ss_pred             -cccccc-ceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccc---cceeEEeeEcCCceEEeccCCCceEEEE
Confidence             778877 99999999999999999999999999999988766554322   22389999999999999998 9999999


Q ss_pred             EecCCceeeEec-CCCceeEEEeecCc-eEEEeCCCCcEEEEEcCCCceeEEeeecc-cceEEEEEEecCCCcEEEEecC
Q psy7482         172 SVEKAGVLQTLK-SESKVHSVCFLNET-TVCTGNEESAITAYNLTDGSHLWQIKASA-SRIKGLVFFSIPQETTVCTGNE  248 (327)
Q Consensus       172 d~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~s~~~~~l~~~~~  248 (327)
                      |+.++.....|. |.++|..++|+.++ +|++++.|+.|++||++..+...++.... .++.++.|  ++.|.+|+.++.
T Consensus       375 dlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~f--D~SGt~L~~~g~  452 (506)
T KOG0289|consen  375 DLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSF--DQSGTYLGIAGS  452 (506)
T ss_pred             EcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEE--cCCCCeEEeecc
Confidence            999999999998 99999999999994 68899999999999999888777775433 36889999  489999999988


Q ss_pred             CCeEEEEEcC--CCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482         249 ESAITAYNLT--DGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWEL  297 (327)
Q Consensus       249 d~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~  297 (327)
                      |=.|++++-.  +..++..+..|.+..+++.|..  ++++++|.|..++++.+
T Consensus       453 ~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  453 DLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             eeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence            7777777643  4557888888988999999988  99999999999998865

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=2.4e-32  Score=229.89  Aligned_cols=272  Identities=16%  Similarity=0.243  Sum_probs=203.3

Q ss_pred             EEeCCCEEEEecCCCeEEEEEcccccc----------c---cccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCC
Q psy7482          20 VAATSKLAASSGADETVVLYDMVKRKQ----------S---GALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus        20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~----------~---~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      .++++..+++++.+.....|+...+..          .   ..+.+|.+.|++++|+| ++++|++|+.|++|++||+.+
T Consensus        28 ~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~  107 (493)
T PTZ00421         28 ALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPE  107 (493)
T ss_pred             ccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCC
Confidence            334766677777777777777543321          1   23678999999999999 888999999999999999976


Q ss_pred             Ce-------EEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          86 WQ-------LEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        86 ~~-------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      +.       .+..+ .+|... |.+++|+|++ ++|++++.|+.|++||+++++....+..     |...|.+++|+|++
T Consensus       108 ~~~~~~~~~~l~~L-~gH~~~-V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~-----h~~~V~sla~spdG  180 (493)
T PTZ00421        108 EGLTQNISDPIVHL-QGHTKK-VGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKC-----HSDQITSLEWNLDG  180 (493)
T ss_pred             CccccccCcceEEe-cCCCCc-EEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcC-----CCCceEEEEEECCC
Confidence            42       34556 778877 9999999975 6999999999999999998876554432     23459999999999


Q ss_pred             cEEEeec-CCeEEEEEecCCceeeEec-CCC-ceeEEEeecC-ceEEEeC----CCCcEEEEEcCCCc-eeEEeeeccc-
Q psy7482         158 LLYAIPI-QNKAVVFSVEKAGVLQTLK-SES-KVHSVCFLNE-TTVCTGN----EESAITAYNLTDGS-HLWQIKASAS-  227 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~-~i~~~~~~~~-~~l~~~~----~d~~i~i~d~~~~~-~~~~~~~~~~-  227 (327)
                      .+|++++ |+.|++||+++++.+..+. |.+ ....+.|.++ +.+++++    .|+.|++||+++.. ++.....+.. 
T Consensus       181 ~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~  260 (493)
T PTZ00421        181 SLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSS  260 (493)
T ss_pred             CEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCC
Confidence            9999987 9999999999999888877 544 3456778887 6666543    57999999998754 3443333333 


Q ss_pred             ceEEEEEEecCCCcEEEEec-CCCeEEEEEcCCCceeEEeec-ccCceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         228 RIKGLVFFSIPQETTVCTGN-EESAITAYNLTDGSHLWHIKA-SASRIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       228 ~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+....|  ++++.+|++++ .|+.|++||+.+++.+..... +..++.+++|.|++-+=...--..|+|.+...
T Consensus       261 ~~~~~~~--d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~~~dv~~~Ei~r~~~l~~~  333 (493)
T PTZ00421        261 ALFIPFF--DEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKWSLDTRKCEIARFYALTYH  333 (493)
T ss_pred             ceEEEEE--cCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecccccccccceeeeEEEEecCC
Confidence            3333344  48999998887 599999999999987766543 45678899999944443333344577777544

>KOG0292|consensus

Probab=100.00  E-value=1e-32  Score=231.56  Aligned_cols=298  Identities=18%  Similarity=0.234  Sum_probs=237.5

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      +.+|.++|+.++|  .+.++++||.|..|++|+.++.+++.++.+|-+-|..+.|++.-.++++++.|.+|+||+..+++
T Consensus        47 FdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~  126 (1202)
T KOG0292|consen   47 FDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRK  126 (1202)
T ss_pred             hhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCc
Confidence            4489999999999  88999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeec------------------------cccCc
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL------------------------SSYGV  143 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------------------------~~~~~  143 (327)
                      ++..+ ++|... |.|..|+|....+++++-|.+|++||+..-+.....+.                        .-...
T Consensus       127 ~iavl-tGHnHY-VMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEG  204 (1202)
T KOG0292|consen  127 CIAVL-TGHNHY-VMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEG  204 (1202)
T ss_pred             eEEEE-ecCceE-EEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecc
Confidence            99999 999999 99999999989999999999999999853221111000                        00123


Q ss_pred             cccceEEEEEccCCcEEEeec-CCeEEEEEecCCceee---EecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce
Q psy7482         144 GFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQ---TLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH  218 (327)
Q Consensus       144 ~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~---~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~  218 (327)
                      |...|+-++|+|.-.++++|+ |..|++|.+...+.-.   ...|...|.++-|+|. +++++.++|+.|++||+...+.
T Consensus       205 HDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~  284 (1202)
T KOG0292|consen  205 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTS  284 (1202)
T ss_pred             cccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccc
Confidence            456699999999999999998 8999999987655332   2238899999999997 8999999999999999999999


Q ss_pred             eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEcc
Q psy7482         219 LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELN  298 (327)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~  298 (327)
                      +++++-.......++.+  |..+++++|- |+-+.+|.++...+.            .+.+.+.|.-.- |..|+-+|+.
T Consensus       285 v~tfrrendRFW~laah--P~lNLfAAgH-DsGm~VFkleRErpa------------~~v~~n~LfYvk-d~~i~~~d~~  348 (1202)
T KOG0292|consen  285 VQTFRRENDRFWILAAH--PELNLFAAGH-DSGMIVFKLERERPA------------YAVNGNGLFYVK-DRFIRSYDLR  348 (1202)
T ss_pred             eeeeeccCCeEEEEEec--CCcceeeeec-CCceEEEEEcccCce------------EEEcCCEEEEEc-cceEEeeecc
Confidence            99998888889999987  7888887775 555667776543322            233343444443 8888999988


Q ss_pred             CccCCCceeeeecC-CCCceEEEEeCCC
Q psy7482         299 EDVTREPQRVSATN-DGCRFTCLAIRPP  325 (327)
Q Consensus       299 ~~~~~~~~~~~~~~-~~~~i~~l~~~p~  325 (327)
                      +........+.... ...++.+|.++|.
T Consensus       349 t~~d~~v~~lr~~g~~~~~~~smsYNpa  376 (1202)
T KOG0292|consen  349 TQKDTAVASLRRPGTLWQPPRSLSYNPA  376 (1202)
T ss_pred             ccccceeEeccCCCcccCCcceeeeccc
Confidence            86322222332221 1256677777774

>KOG0313|consensus

Probab=100.00  E-value=4.8e-33  Score=212.47  Aligned_cols=261  Identities=15%  Similarity=0.226  Sum_probs=217.7

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC---CEEEEEeCCCCEEEEEcCC
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG---KLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~  129 (327)
                      |.+.|.++...  ++.|++|++||.+++||.. |+....+ .+|.+. |.+++|....   ..|++++.|.++++|..+.
T Consensus       104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~-~Ght~~-ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~  178 (423)
T KOG0313|consen  104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTI-VGHTGP-IKSVAWVIKNSSSCLFVSASMDQTLRLWKWNV  178 (423)
T ss_pred             chhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEE-ecCCcc-eeeeEEEecCCccceEEEecCCceEEEEEecC
Confidence            78888888776  7799999999999999976 7888888 899988 9988886533   3599999999999999988


Q ss_pred             CceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecC-------------------------CceeeEec
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEK-------------------------AGVLQTLK  183 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~-------------------------~~~~~~~~  183 (327)
                      ++....... ....|...|.+++..+++..+++|+ |..+.+|+..+                         +.++..+.
T Consensus       179 ~~~~~~~~~-~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~  257 (423)
T KOG0313|consen  179 GENKVKALK-VCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLE  257 (423)
T ss_pred             chhhhhHHh-HhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEec
Confidence            765433322 2235677899999999999999999 99999999322                         12334444


Q ss_pred             -CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-
Q psy7482         184 -SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-  261 (327)
Q Consensus       184 -~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-  261 (327)
                       |..+|.++.|++...+++++.|.+|+.||+.++....++.+. ..+.++.+.  |..++|++|+.|..|++||.+++. 
T Consensus       258 GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~-ksl~~i~~~--~~~~Ll~~gssdr~irl~DPR~~~g  334 (423)
T KOG0313|consen  258 GHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTN-KSLNCISYS--PLSKLLASGSSDRHIRLWDPRTGDG  334 (423)
T ss_pred             ccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecC-cceeEeecc--cccceeeecCCCCceeecCCCCCCC
Confidence             889999999998899999999999999999999988887654 458999995  899999999999999999998775 


Q ss_pred             --eeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         262 --HLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       262 --~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                        ...++.+|.+.|.++.|+|   ..|++|+.||++++||++..   .-...-...|..+|.++.|+..
T Consensus       335 s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~---k~plydI~~h~DKvl~vdW~~~  400 (423)
T KOG0313|consen  335 SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRST---KAPLYDIAGHNDKVLSVDWNEG  400 (423)
T ss_pred             ceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccC---CCcceeeccCCceEEEEeccCC
Confidence              5678999999999999999   89999999999999999988   2222333457889999999865

>KOG0283|consensus

Probab=100.00  E-value=7.2e-34  Score=237.42  Aligned_cols=244  Identities=19%  Similarity=0.313  Sum_probs=203.5

Q ss_pred             ccccc-cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC---------------------------------------
Q psy7482          47 SGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW---------------------------------------   86 (327)
Q Consensus        47 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~---------------------------------------   86 (327)
                      .+.+. .|.+.|.++.|++||+|||+||.|+.|+||.+...                                       
T Consensus       259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~  338 (712)
T KOG0283|consen  259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS  338 (712)
T ss_pred             eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence            45566 89999999999999999999999999999987540                                       


Q ss_pred             ---------------------eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc
Q psy7482          87 ---------------------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF  145 (327)
Q Consensus        87 ---------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  145 (327)
                                           ++...+ .+|.+. |..+.|+.++ +|++++.|.+|++|++...+++..+.....    
T Consensus       339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef-~GHt~D-ILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~Hndf----  411 (712)
T KOG0283|consen  339 SRKGSQSPCVLLPLKAFVFSEKPFCEF-KGHTAD-ILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFSHNDF----  411 (712)
T ss_pred             cccccCCccccCCCccccccccchhhh-hccchh-heecccccCC-eeEeccccccEEeecCCCcceeeEEecCCe----
Confidence                                 011222 677877 9999999755 899999999999999999999988877766    


Q ss_pred             cceEEEEEcc-CCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482         146 ENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       146 ~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~  222 (327)
                        |+|++|+| |.++|++|+ |+.++||++...+...-.....-|++++|.|| +..++|+.+|.+++|+....+....+
T Consensus       412 --VTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~  489 (712)
T KOG0283|consen  412 --VTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDF  489 (712)
T ss_pred             --eEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEee
Confidence              99999999 678999998 99999999999888888777899999999999 78899999999999999887765443


Q ss_pred             ee--c------ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC--ceEEEeeeC--cEEEEEecCC
Q psy7482         223 KA--S------ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS--RIKGLASHR--NHLICITSAG  290 (327)
Q Consensus       223 ~~--~------~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~--~~l~~~~~dg  290 (327)
                      ..  |      ...|+.+.|++ .+...+++.+.|..|+|||.++..++..++++..  .-....|+.  ++|+++++|.
T Consensus       490 ~I~~~~~Kk~~~~rITG~Q~~p-~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs  568 (712)
T KOG0283|consen  490 HIRLHNKKKKQGKRITGLQFFP-GDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDS  568 (712)
T ss_pred             eEeeccCccccCceeeeeEecC-CCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCc
Confidence            21  1      22799999985 4445678888999999999999999988887642  223445665  9999999999


Q ss_pred             cEEEEEccCc
Q psy7482         291 DLVVWELNED  300 (327)
Q Consensus       291 ~v~iw~~~~~  300 (327)
                      .|++|++...
T Consensus       569 ~VYiW~~~~~  578 (712)
T KOG0283|consen  569 WVYIWKNDSF  578 (712)
T ss_pred             eEEEEeCCCC
Confidence            9999998665

>KOG0301|consensus

Probab=100.00  E-value=6.6e-33  Score=226.77  Aligned_cols=280  Identities=18%  Similarity=0.268  Sum_probs=238.7

Q ss_pred             eeEEEeeeeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccc--cccccccccEEE-EEECC-CCCeEEEecCCC
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQS--GALMQHEGTITC-LKFTP-EGSHLISCSDDG   76 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~--~~~~~~~~~v~~-~~~~~-~~~~l~~~~~d~   76 (327)
                      |++...+.  ||...|..+++ ++..++++|.||++++|+-..++.+  ..+.+|.+-|.. +++.+ ++-.|++|+.|.
T Consensus         4 Y~ls~~l~--gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~   81 (745)
T KOG0301|consen    4 YKLSHELE--GHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDT   81 (745)
T ss_pred             ceeEEEec--cCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccc
Confidence            66666665  99999999999 8888999999999999997655443  446678887777 88876 455699999999


Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  156 (327)
                      .+.+|...+.++...+ .+|... |.+++...++. +++|+.|.++++|-...  ....     ...|...|.++..-|+
T Consensus        82 ~i~v~~~~~~~P~~~L-kgH~sn-VC~ls~~~~~~-~iSgSWD~TakvW~~~~--l~~~-----l~gH~asVWAv~~l~e  151 (745)
T KOG0301|consen   82 TIIVFKLSQAEPLYTL-KGHKSN-VCSLSIGEDGT-LISGSWDSTAKVWRIGE--LVYS-----LQGHTASVWAVASLPE  151 (745)
T ss_pred             eEEEEecCCCCchhhh-hccccc-eeeeecCCcCc-eEecccccceEEecchh--hhcc-----cCCcchheeeeeecCC
Confidence            9999999999999999 999999 99999887776 99999999999998643  3222     2344667999999999


Q ss_pred             CcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         157 GLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       157 ~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                      +.++..+.|..|++|.-  ++.++++. |...|+.+++-++..+++++.||.|++|++ +++.+.++.+|+.-++++...
T Consensus       152 ~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~  228 (745)
T KOG0301|consen  152 NTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMA  228 (745)
T ss_pred             CcEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEec
Confidence            95555555999999975  77888888 999999999999999999999999999999 788999999999999999964


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                        +++..++++++|++++||+..  ++.+.+....-.|+++.+-+ .-|++|++||.||||.....
T Consensus       229 --~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~k~  290 (745)
T KOG0301|consen  229 --LSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVDKD  290 (745)
T ss_pred             --CCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEeccc
Confidence              889999999999999999976  77777776666899998877 88999999999999988754

>KOG0277|consensus

Probab=100.00  E-value=1.4e-33  Score=204.59  Aligned_cols=237  Identities=15%  Similarity=0.195  Sum_probs=201.5

Q ss_pred             CCccEEEEEe---CCCEEEEecCCCeEEEEEccc-cccccccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCe
Q psy7482          13 HTASVRSVAA---TSKLAASSGADETVVLYDMVK-RKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        13 h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      -.+.+..++|   ..+.+++++.||+++|||+.. ..+++.++.|..+|.++.|++ +.+.+++++.|++|++|+...++
T Consensus        59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~  138 (311)
T KOG0277|consen   59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN  138 (311)
T ss_pred             cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc
Confidence            4577888999   677888999999999999643 368899999999999999998 56678888999999999999999


Q ss_pred             EEEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC-CcEEEeec-
Q psy7482          88 LEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE-GLLYAIPI-  164 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~-  164 (327)
                      .+.++ .+|... |....|+| .++++++++.|+.+++||++..-....+..+.     ..+.++.|+.- ..++++|+ 
T Consensus       139 Sv~Tf-~gh~~~-Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~-----~Eil~cdw~ky~~~vl~Tg~v  211 (311)
T KOG0277|consen  139 SVQTF-NGHNSC-IYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHN-----SEILCCDWSKYNHNVLATGGV  211 (311)
T ss_pred             ceEee-cCCccE-EEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecc-----ceeEeecccccCCcEEEecCC
Confidence            99999 899888 99999999 67899999999999999998754433344443     34999999984 46777777 


Q ss_pred             CCeEEEEEecCCc-eeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCC-ceeEEeeecccceEEEEEEecCC
Q psy7482         165 QNKAVVFSVEKAG-VLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDG-SHLWQIKASASRIKGLVFFSIPQ  239 (327)
Q Consensus       165 ~~~i~i~d~~~~~-~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~s~~  239 (327)
                      |+.|+.||+++.+ ++..+. |.-.|..+.|+|.  ..|++++.|-++++||.... ..+.+...|+.-+..+.|+. -+
T Consensus       212 d~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~-~~  290 (311)
T KOG0277|consen  212 DNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSL-FD  290 (311)
T ss_pred             CceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEecccccc-cc
Confidence            9999999998765 455555 8889999999997  78999999999999998744 45667788999999999985 68


Q ss_pred             CcEEEEecCCCeEEEEEc
Q psy7482         240 ETTVCTGNEESAITAYNL  257 (327)
Q Consensus       240 ~~~l~~~~~d~~i~i~d~  257 (327)
                      +.++|+.+.|+.++||+.
T Consensus       291 ~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  291 PGQVASTGWDELLYVWNP  308 (311)
T ss_pred             Cceeeecccccceeeecc
Confidence            899999999999999984

>KOG0300|consensus

Probab=100.00  E-value=2.8e-33  Score=209.70  Aligned_cols=287  Identities=16%  Similarity=0.262  Sum_probs=238.4

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEE
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIA   79 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~   79 (327)
                      +++.+.|.  ||.+.|+.++.  ....+.+++.|.+.+||.+++++++.++.+|.+.|++++|++.+.++++++.|++-.
T Consensus       138 ~~lvre~~--GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taH  215 (481)
T KOG0300|consen  138 FRLVRELE--GHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAH  215 (481)
T ss_pred             Eeehhhhc--ccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchH
Confidence            34444444  99999999999  556888999999999999999999999999999999999999999999999999999


Q ss_pred             EEEc------CC----------------------------------CeEEEeEEecccCCceeeEEEecCCCEEEEEeCC
Q psy7482          80 IFRV------GS----------------------------------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD  119 (327)
Q Consensus        80 iw~~------~~----------------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  119 (327)
                      ||..      ..                                  ..++..+ .+|... |.+..|...++.+++++.|
T Consensus       216 IW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~l-tgH~~v-V~a~dWL~gg~Q~vTaSWD  293 (481)
T KOG0300|consen  216 IWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRL-TGHRAV-VSACDWLAGGQQMVTASWD  293 (481)
T ss_pred             HHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeee-eccccc-eEehhhhcCcceeeeeecc
Confidence            9962      10                                  0123344 677777 8999999999999999999


Q ss_pred             CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC-ceeeEec-CCCceeEEEeecC
Q psy7482         120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA-GVLQTLK-SESKVHSVCFLNE  196 (327)
Q Consensus       120 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~-~~~~~~~-~~~~i~~~~~~~~  196 (327)
                      .+..+||+++++.+..+..+.     ...+.++-+|..+++++++ |.+.++||.+.. ..+..|+ |...|++..|..+
T Consensus       294 RTAnlwDVEtge~v~~LtGHd-----~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~d  368 (481)
T KOG0300|consen  294 RTANLWDVETGEVVNILTGHD-----SELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTD  368 (481)
T ss_pred             ccceeeeeccCceeccccCcc-----hhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecC
Confidence            999999999999876654443     3478888899999999988 999999999843 2345565 8899999999999


Q ss_pred             ceEEEeCCCCcEEEEEcCCCc-eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce----eEEeecccC
Q psy7482         197 TTVCTGNEESAITAYNLTDGS-HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH----LWHIKASAS  271 (327)
Q Consensus       197 ~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~  271 (327)
                      ..+++|+.|.+|++||+++.. ++.+++. ..+++.++.+  ..+..++.--.+..|++||+.....    ...-++|..
T Consensus       369 d~vVSgSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs--~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrR  445 (481)
T KOG0300|consen  369 DRVVSGSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVS--KGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRR  445 (481)
T ss_pred             CceeecCCCceEEEeeeccccCcceeeec-CCccceeEee--cCCceEEeccCCceEEEEecCCCccccCCcccccccce
Confidence            999999999999999999865 4666664 4568889884  6667888888889999999865442    234468999


Q ss_pred             ceEEEeeeC----cEEEEEecCCcEEEEEccCc
Q psy7482         272 RIKGLASHR----NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       272 ~v~~~~~~~----~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .|.+++|..    .-|++++.|..+.-|+++.+
T Consensus       446 MV~c~AW~eehp~cnLftcGFDR~v~gW~in~p  478 (481)
T KOG0300|consen  446 MVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP  478 (481)
T ss_pred             eeeeeeccccCcccccccccccceeeeeEeccc
Confidence            999999987    77889999999999999876

>KOG0310|consensus

Probab=100.00  E-value=1.1e-32  Score=216.91  Aligned_cols=235  Identities=19%  Similarity=0.282  Sum_probs=203.9

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      ....|.+++|  ||++||+|+..|.|+|+|..+...++.+.+|+.+|....|+|+ +..|++|+.|+.+++||+.+....
T Consensus        67 Fk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~  146 (487)
T KOG0310|consen   67 FKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQ  146 (487)
T ss_pred             hccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEE
Confidence            4577899999  9999999999999999998887788999999999999999995 557788999999999999998875


Q ss_pred             EeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeecCCe
Q psy7482          90 KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNK  167 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~  167 (327)
                      ..+ .+|.+. |.+.+|+| ++..+++|+.||.|++||.+.. ..+..+...      .+|..+.+-|.|.++++++.+.
T Consensus       147 ~~l-~~htDY-VR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg------~pVe~vl~lpsgs~iasAgGn~  218 (487)
T KOG0310|consen  147 AEL-SGHTDY-VRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHG------CPVESVLALPSGSLIASAGGNS  218 (487)
T ss_pred             EEe-cCCcce-eEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCC------CceeeEEEcCCCCEEEEcCCCe
Confidence            566 899999 99999999 5668999999999999999987 333333322      3499999999999999999999


Q ss_pred             EEEEEecCC-ceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEE
Q psy7482         168 AVVFSVEKA-GVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVC  244 (327)
Q Consensus       168 i~i~d~~~~-~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~  244 (327)
                      +++||+.+| +.+..+. |...|+|+.+..+ ..|++++-|+.+++||+.+.+.++.+. ..++|.+++.+  |+++.++
T Consensus       219 vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs--~dd~t~v  295 (487)
T KOG0310|consen  219 VKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVS--PDDQTVV  295 (487)
T ss_pred             EEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeee-cccceeeEEec--CCCceEE
Confidence            999999955 4455555 9999999999988 899999999999999998888888876 56789999995  8999999


Q ss_pred             EecCCCeEEEEEcC
Q psy7482         245 TGNEESAITAYNLT  258 (327)
Q Consensus       245 ~~~~d~~i~i~d~~  258 (327)
                      .|..+|.+.+-+..
T Consensus       296 iGmsnGlv~~rr~~  309 (487)
T KOG0310|consen  296 IGMSNGLVSIRRRE  309 (487)
T ss_pred             Eecccceeeeehhh
Confidence            99999998877543

>KOG0310|consensus

Probab=100.00  E-value=1.8e-32  Score=215.68  Aligned_cols=276  Identities=17%  Similarity=0.239  Sum_probs=230.0

Q ss_pred             CCccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          13 HTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        13 h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      ..++|.+++|   +..-+|+.+ .-.+.||+..+.....++......|.++.|..||++|++|...|.|+++|..+...+
T Consensus        25 e~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iL  103 (487)
T KOG0310|consen   25 EHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVIL  103 (487)
T ss_pred             ccCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHH
Confidence            4578999999   344455555 356999999998888888888899999999999999999999999999997776677


Q ss_pred             EeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-EEEeec-CC
Q psy7482          90 KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-LYAIPI-QN  166 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~~  166 (327)
                      ..+ .+|..+ +..+.|+| ++..+++|+.|+.+++||+.+...  ...+.   .|++.|.+.+|+|... ++++|+ ||
T Consensus       104 R~~-~ah~ap-v~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v--~~~l~---~htDYVR~g~~~~~~~hivvtGsYDg  176 (487)
T KOG0310|consen  104 RQL-YAHQAP-VHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV--QAELS---GHTDYVRCGDISPANDHIVVTGSYDG  176 (487)
T ss_pred             HHH-hhccCc-eeEEEecccCCeEEEecCCCceEEEEEcCCcEE--EEEec---CCcceeEeeccccCCCeEEEecCCCc
Confidence            777 888887 99999999 556788888999999999988763  33333   3467799999999654 677777 99


Q ss_pred             eEEEEEecCC-ceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce-eEEeeecccceEEEEEEecCCCcEE
Q psy7482         167 KAVVFSVEKA-GVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH-LWQIKASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       167 ~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      .|++||++.. ..+..+.|..+|..+.+-|. +.++++ ....|++||+.+|.. +..+..|...|+|+.+.  .++..|
T Consensus       177 ~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasA-gGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~--s~~~rL  253 (487)
T KOG0310|consen  177 KVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASA-GGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLA--SDSTRL  253 (487)
T ss_pred             eEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEc-CCCeEEEEEecCCceehhhhhcccceEEEEEee--cCCceE
Confidence            9999999987 78888999999999999999 555554 456899999986654 44455599999999996  688999


Q ss_pred             EEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         244 CTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++|+-|+.+++||+.+.+.+..+. ..++|.+++.+|  +.++.|-.+|.+.+=+...+
T Consensus       254 lS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~k  311 (487)
T KOG0310|consen  254 LSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREVK  311 (487)
T ss_pred             eecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeeeehhhcc
Confidence            999999999999998888888877 456999999999  89999999999887755544

>KOG0647|consensus

Probab=100.00  E-value=3.2e-32  Score=202.17  Aligned_cols=261  Identities=16%  Similarity=0.232  Sum_probs=213.9

Q ss_pred             cCCccEEEEEe---CCCEEEEecCCCeEEEEEccc-cccc-cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482          12 SHTASVRSVAA---TSKLAASSGADETVVLYDMVK-RKQS-GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        12 ~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      .-.+.|.+|+|   ...+++.|+.||+||+|+++. +... .....|.++|.+++|+.||..+++|+.|+.+++||+.++
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~  104 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG  104 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence            35688999999   567788999999999999987 3332 445579999999999999999999999999999999999


Q ss_pred             eEEEeEEecccCCceeeEEEecCCC--EEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGK--LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      +....  ..|.+. |..+.|-+...  .|++|+.|.+|+.||++...++..+.++..      +.++..-  ..+++++.
T Consensus       105 Q~~~v--~~Hd~p-vkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeR------vYa~Dv~--~pm~vVat  173 (347)
T KOG0647|consen  105 QVSQV--AAHDAP-VKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPER------VYAADVL--YPMAVVAT  173 (347)
T ss_pred             Ceeee--eecccc-eeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccce------eeehhcc--CceeEEEe
Confidence            65544  577777 99999988554  899999999999999999998888888776      6655443  34666665


Q ss_pred             -CCeEEEEEecCCceee-Eec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC--ceeEEeeeccc---------c
Q psy7482         165 -QNKAVVFSVEKAGVLQ-TLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG--SHLWQIKASAS---------R  228 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~-~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~---------~  228 (327)
                       +..|.+|+++++.... ...  ..-.+.+++..+| ...+.|+-+|.+.+..+..+  +.-.+|+.|..         .
T Consensus       174 a~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYa  253 (347)
T KOG0647|consen  174 AERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYA  253 (347)
T ss_pred             cCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEE
Confidence             9999999997764332 222  4567899999888 66799999999999999876  44456677752         5


Q ss_pred             eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEE
Q psy7482         229 IKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLIC  285 (327)
Q Consensus       229 v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~  285 (327)
                      |++++|+  |.-..|++++.||++.+||-.....+.+.+.|..+|++..|+.  .++|-
T Consensus       254 VNsi~Fh--P~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaY  310 (347)
T KOG0647|consen  254 VNSIAFH--PVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAY  310 (347)
T ss_pred             ecceEee--cccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEE
Confidence            7889998  7888999999999999999998889999999999999999997  44443

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=3.8e-31  Score=223.78  Aligned_cols=250  Identities=9%  Similarity=0.084  Sum_probs=192.8

Q ss_pred             ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCce-eeee--eccccCccccc
Q psy7482          72 CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRS-AYIT--NLSSYGVGFEN  147 (327)
Q Consensus        72 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~-~~~~--~~~~~~~~~~~  147 (327)
                      |+.++.+++|+......+..+ .+|.+. |.+++|+|+ +.+|++|+.||.|++||+.++.. ....  .......|...
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L-~gH~~~-V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~  127 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKL-KGHTSS-ILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKK  127 (568)
T ss_pred             CCceeEEEeeecCCCceEEEE-cCCCCC-EEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCc
Confidence            667889999998877777777 788887 999999996 78999999999999999986432 1100  00111234566


Q ss_pred             eEEEEEccCCcEE-Eeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee
Q psy7482         148 LDSVVWSPEGLLY-AIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       148 v~~~~~~~~~~~l-~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~  224 (327)
                      |.+++|+|++..+ ++++ |+.|++||+++++....+.+...|.+++|+|+ .+|++++.|+.|++||+++++.+.++.+
T Consensus       128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~g  207 (568)
T PTZ00420        128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHI  207 (568)
T ss_pred             EEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence            9999999998754 5655 99999999999988888877788999999999 7788888999999999999999999999


Q ss_pred             cccceEEEEEEe---cCCCcEEEEecCCC----eEEEEEcCC-CceeEEeecc--cCceEEEeeeC--cEEEEEecCCcE
Q psy7482         225 SASRIKGLVFFS---IPQETTVCTGNEES----AITAYNLTD-GSHLWHIKAS--ASRIKGLASHR--NHLICITSAGDL  292 (327)
Q Consensus       225 ~~~~v~~~~~~~---s~~~~~l~~~~~d~----~i~i~d~~~-~~~~~~~~~~--~~~v~~~~~~~--~~l~~~~~dg~v  292 (327)
                      |.+.+....+..   ++++.+|++++.|+    .|+|||+++ .+++..+..+  .+.+......+  .++++|+.|+.|
T Consensus       208 H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tI  287 (568)
T PTZ00420        208 HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNC  287 (568)
T ss_pred             ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeE
Confidence            988654433321   37888888877664    799999985 4555554432  33333333333  788899999999


Q ss_pred             EEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         293 VVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       293 ~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ++|++..+   ....+....+..++.+++|.|.-
T Consensus       288 r~~e~~~~---~~~~l~~~~s~~p~~g~~f~Pkr  318 (568)
T PTZ00420        288 RYYQHSLG---SIRKVNEYKSCSPFRSFGFLPKQ  318 (568)
T ss_pred             EEEEccCC---cEEeecccccCCCccceEEcccc
Confidence            99999876   55666666677889999999963

>KOG0305|consensus

Probab=100.00  E-value=6.9e-32  Score=219.71  Aligned_cols=237  Identities=21%  Similarity=0.290  Sum_probs=210.1

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEcccccccccccc-ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      ...|+++.|  +|.+||+|..+|.|.|||..+.+.+..+.+ |...|-+++|.  +..+.+|+.|+.|..+|++..+...
T Consensus       217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~  294 (484)
T KOG0305|consen  217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV  294 (484)
T ss_pred             CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh
Confidence            789999999  899999999999999999999999999998 99999999998  6789999999999999998877655


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEeec---CC
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI---QN  166 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~---~~  166 (327)
                      ....+|... |..+.|++|+.++++|+.|+.+.|||....++...+..+     ...|..++|+| ...+||+|+   |+
T Consensus       295 ~~~~~H~qe-VCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H-----~aAVKA~awcP~q~~lLAsGGGs~D~  368 (484)
T KOG0305|consen  295 STLQGHRQE-VCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEH-----TAAVKALAWCPWQSGLLATGGGSADR  368 (484)
T ss_pred             hhhhcccce-eeeeEECCCCCeeccCCCccceEeccCCCccccEEEecc-----ceeeeEeeeCCCccCceEEcCCCccc
Confidence            522677777 999999999999999999999999999665554444332     44599999999 556888874   89


Q ss_pred             eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEE--eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482         167 KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCT--GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      .|++||..+++.+..+...+.|.++.|++. +.+++  |..++.|.||+..+.+.+..+.+|...|..+++  +|+|..+
T Consensus       369 ~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~--SPdg~~i  446 (484)
T KOG0305|consen  369 CIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLAL--SPDGETI  446 (484)
T ss_pred             EEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEE--CCCCCEE
Confidence            999999999999999999999999999998 55554  557889999999999999999999999999999  5999999


Q ss_pred             EEecCCCeEEEEEcCCC
Q psy7482         244 CTGNEESAITAYNLTDG  260 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~~  260 (327)
                      ++|+.|.++++|++-+.
T Consensus       447 ~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  447 VTGAADETLRFWNLFDE  463 (484)
T ss_pred             EEecccCcEEeccccCC
Confidence            99999999999998664

>KOG0308|consensus

Probab=100.00  E-value=6.6e-33  Score=225.28  Aligned_cols=274  Identities=16%  Similarity=0.245  Sum_probs=232.1

Q ss_pred             CCCEEEEecCCCeEEEEEccccc------cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC--eEEEeEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRK------QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKLFKK   94 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~   94 (327)
                      .+++|+|||.||.|++|+.....      ....++.|.+.|+.++...+++.|++++.|-+|++|+...+  -+..++ .
T Consensus        36 ~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~sti-r  114 (735)
T KOG0308|consen   36 NGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTI-R  114 (735)
T ss_pred             CCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhh-h
Confidence            67889999999999999986432      36678889999999999999999999999999999999876  456666 7


Q ss_pred             cccCCceeeEEE-ecCCCEEEEEeCCCCEEEEEcCCCce--eeee---eccccC-ccccceEEEEEccCCcEEEeec-CC
Q psy7482          95 AHKGTAVNHISI-HPSGKLALSVGKDKTLRTWNLVKGRS--AYIT---NLSSYG-VGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        95 ~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~---~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      .|.+. |.|+++ .++..++++|+.|+.|.+||++++..  +..+   ...... .+..++.+++.++.|..++.|+ ++
T Consensus       115 ~H~DY-Vkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek  193 (735)
T KOG0308|consen  115 THKDY-VKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEK  193 (735)
T ss_pred             cccch-heeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCccc
Confidence            88888 999999 77888999999999999999998733  2111   111112 4567799999999998888887 99


Q ss_pred             eEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEE
Q psy7482         167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVC  244 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~  244 (327)
                      .+++||.++++.+..+. |...|..+..++| ..+++++.||+|++||+...+++.++..|...+.++...  |+-.++.
T Consensus       194 ~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~--~sf~~vY  271 (735)
T KOG0308|consen  194 DLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSS--PSFTHVY  271 (735)
T ss_pred             ceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeC--CCcceEE
Confidence            99999999998888877 8999999999999 789999999999999999999999999999999999984  8999999


Q ss_pred             EecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         245 TGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       245 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +|+.||.|..=|+++......+-....+|..+..+.  +-+-+++.|+.|+-|.....
T Consensus       272 sG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~  329 (735)
T KOG0308|consen  272 SGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPD  329 (735)
T ss_pred             ecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCccc
Confidence            999999999999998654444444555777777774  55577888999999987665

>KOG0973|consensus

Probab=100.00  E-value=1.7e-31  Score=228.94  Aligned_cols=281  Identities=17%  Similarity=0.300  Sum_probs=230.1

Q ss_pred             CCccEEEEEe--CCCEEEEec--CCCeEEEEEccc------------cccccccccccccEEEEEECCCCCeEEEecCCC
Q psy7482          13 HTASVRSVAA--TSKLAASSG--ADETVVLYDMVK------------RKQSGALMQHEGTITCLKFTPEGSHLISCSDDG   76 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~--~dg~v~~w~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~   76 (327)
                      +...|.++..  ++..+|||+  .||.++||+.+.            .+.+.+...|.+.|+|+.|+|||++||+|++|+
T Consensus        12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~   91 (942)
T KOG0973|consen   12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR   91 (942)
T ss_pred             CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence            4567888888  999999999  899999998642            233455667999999999999999999999999


Q ss_pred             cEEEEEcCC------------------CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeec
Q psy7482          77 SIAIFRVGS------------------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL  138 (327)
Q Consensus        77 ~i~iw~~~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  138 (327)
                      .|.||+...                  .+....+ .+|... |..++|+|++.+|++++.|++|.+|+..+.+.+..+..
T Consensus        92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l-~~H~~D-V~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~  169 (942)
T KOG0973|consen   92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSIL-RGHDSD-VLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRG  169 (942)
T ss_pred             eEEEeeecccCCcccccccccccccceeeEEEEE-ecCCCc-cceeccCCCccEEEEecccceEEEEccccceeeeeeec
Confidence            999998762                  2355666 788888 99999999999999999999999999999866555443


Q ss_pred             cccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-------CCCceeEEEeecC-ceEEEeC----CC
Q psy7482         139 SSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-------SESKVHSVCFLNE-TTVCTGN----EE  205 (327)
Q Consensus       139 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-------~~~~i~~~~~~~~-~~l~~~~----~d  205 (327)
                      +     ...|..+.|.|-|++||+-+ |++|++|++.+-...+.+.       ....+..+.|+|| .+|++..    ..
T Consensus       170 H-----~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~  244 (942)
T KOG0973|consen  170 H-----QSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGK  244 (942)
T ss_pred             c-----cccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCc
Confidence            3     34599999999999999987 9999999987766666554       2346889999999 6666543    34


Q ss_pred             CcEEEEEcCCCceeEEeeecccceEEEEEEec----CC-------Cc----EEEEecCCCeEEEEEcCCCceeEEee-cc
Q psy7482         206 SAITAYNLTDGSHLWQIKASASRIKGLVFFSI----PQ-------ET----TVCTGNEESAITAYNLTDGSHLWHIK-AS  269 (327)
Q Consensus       206 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s----~~-------~~----~l~~~~~d~~i~i~d~~~~~~~~~~~-~~  269 (327)
                      .++.|.+-.+.+.-..+-+|..++.++.|+|.    +.       ..    .+|+|+.|++|.||.....+++.... -.
T Consensus       245 ~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf  324 (942)
T KOG0973|consen  245 STIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLF  324 (942)
T ss_pred             ceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhh
Confidence            56888888777777888999999999999751    11       11    67899999999999998877765543 23


Q ss_pred             cCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         270 ASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       270 ~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ...|.+++|+|  ..|+.+|.||+|.+..++..
T Consensus       325 ~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~  357 (942)
T KOG0973|consen  325 NKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK  357 (942)
T ss_pred             cCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence            56899999999  78889999999999999876

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=100.00  E-value=4e-30  Score=208.80  Aligned_cols=283  Identities=12%  Similarity=0.154  Sum_probs=213.4

Q ss_pred             CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecccCCcee
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN  102 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  102 (327)
                      +.++++++.|+.|++||+.+++....+..+.. +.+++|+|+++.+ ++++.++.|++||..+++....+ ..+. . +.
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-~~~~-~-~~   76 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTL-PSGP-D-PE   76 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEec-cCCC-C-cc
Confidence            46788999999999999999988888876544 6789999999876 56778899999999998887766 3332 2 56


Q ss_pred             eEEEecCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C-CeEEEEEecCCcee
Q psy7482         103 HISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-NKAVVFSVEKAGVL  179 (327)
Q Consensus       103 ~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-~~i~i~d~~~~~~~  179 (327)
                      .+.|+|+++.++++ ..++.+++||+++++.+..+.....      +.+++|+|++++++++. + ..+..||.++++..
T Consensus        77 ~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~------~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~  150 (300)
T TIGR03866        77 LFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVE------PEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIV  150 (300)
T ss_pred             EEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCC------cceEEECCCCCEEEEEecCCCeEEEEeCCCCeEE
Confidence            78999999877655 5689999999988766554433222      67899999999998886 3 45778899888777


Q ss_pred             eEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCceeEEeeecc-----c--ceEEEEEEecCCCcEEEE-ecCC
Q psy7482         180 QTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGSHLWQIKASA-----S--RIKGLVFFSIPQETTVCT-GNEE  249 (327)
Q Consensus       180 ~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~-----~--~v~~~~~~~s~~~~~l~~-~~~d  249 (327)
                      ........+..++|+|+ ..++ ++..++.|++||+++++.+..+..+.     .  ....++|  +|+++++++ .+.+
T Consensus       151 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--s~dg~~~~~~~~~~  228 (300)
T TIGR03866       151 DNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKL--TKDGKTAFVALGPA  228 (300)
T ss_pred             EEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEE--CCCCCEEEEEcCCC
Confidence            66655556688999998 5554 44569999999999988776654321     1  2245677  489987554 4556


Q ss_pred             CeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEE-ecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482         250 SAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICI-TSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       250 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~-~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                      +.+.+||+.+++.+..+. +...+.+++|+|  ++|+++ +.+|.|++||+....  ....+   ..+...+.++++|
T Consensus       229 ~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~--~~~~~---~~~~~~~~~~~~~  300 (300)
T TIGR03866       229 NRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK--VIKSI---KVGRLPWGVVVRP  300 (300)
T ss_pred             CeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc--EEEEE---EcccccceeEeCC
Confidence            789999999888776554 345789999999  677765 568999999999982  22333   3456678998886

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0274|consensus

Probab=100.00  E-value=7.1e-32  Score=227.40  Aligned_cols=244  Identities=17%  Similarity=0.292  Sum_probs=211.5

Q ss_pred             eccCCccEEEEEeC--CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          10 THSHTASVRSVAAT--SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        10 ~~~h~~~v~~~~~~--~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      +.||.+.|.++++.  +.++++|+.|.++++||..++++...+.+|.+.|.++...  ...+++|+.|.+|++|++.++.
T Consensus       245 l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~  322 (537)
T KOG0274|consen  245 LVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGA  322 (537)
T ss_pred             ccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcc
Confidence            56999999999995  9999999999999999999999999999999999999875  5578889999999999999999


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      .+..+ .+|.+. |+++..+  +.++++|+.|++|++||+.+++++..+..     |...|.++.+.+. ..++.|+ |+
T Consensus       323 ~l~l~-~~h~~~-V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~g-----H~~~V~sl~~~~~-~~~~Sgs~D~  392 (537)
T KOG0274|consen  323 CLNLL-RGHTGP-VNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSG-----HTGRVYSLIVDSE-NRLLSGSLDT  392 (537)
T ss_pred             eEEEe-cccccc-EEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecC-----CcceEEEEEecCc-ceEEeeeecc
Confidence            99999 678887 9999987  77999999999999999999888666544     4556999988876 6777776 99


Q ss_pred             eEEEEEecCC-ceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee-cccceEEEEEEecCCCcEE
Q psy7482         167 KAVVFSVEKA-GVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA-SASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       167 ~i~i~d~~~~-~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l  243 (327)
                      .|++||+++. +++..+. |..-+..+.+ .++.|++++.|++|++||..++++++.+.+ |...+..+++    ....+
T Consensus       393 ~IkvWdl~~~~~c~~tl~~h~~~v~~l~~-~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~----~~~~i  467 (537)
T KOG0274|consen  393 TIKVWDLRTKRKCIHTLQGHTSLVSSLLL-RDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALAL----GKEEI  467 (537)
T ss_pred             ceEeecCCchhhhhhhhcCCccccccccc-ccceeEeccccccEEEeecccCceeeeeccCCcccEEEeec----CcceE
Confidence            9999999999 8998888 4455544444 347899999999999999999999999988 6677888775    25788


Q ss_pred             EEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         244 CTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      ++++.|+.+++||++++++...+-.+.
T Consensus       468 l~s~~~~~~~l~dl~~~~~~~~l~~~~  494 (537)
T KOG0274|consen  468 LCSSDDGSVKLWDLRSGTLIRTLLSTD  494 (537)
T ss_pred             EEEecCCeeEEEecccCchhhhhhhcc
Confidence            899999999999999999887774443

>KOG1446|consensus

Probab=100.00  E-value=3.5e-30  Score=192.74  Aligned_cols=270  Identities=16%  Similarity=0.206  Sum_probs=217.0

Q ss_pred             cccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC--CCC
Q psy7482          44 RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKT  121 (327)
Q Consensus        44 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~  121 (327)
                      .++.+.+..-...|+++.|+++|.+|++++.|.++++||..+++..+++ ..+.-. +..+.|......++.++.  |.+
T Consensus         4 ~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti-~skkyG-~~~~~Fth~~~~~i~sStk~d~t   81 (311)
T KOG1446|consen    4 FRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTI-NSKKYG-VDLACFTHHSNTVIHSSTKEDDT   81 (311)
T ss_pred             cccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEe-eccccc-ccEEEEecCCceEEEccCCCCCc
Confidence            3455566666788999999999999999999999999999999999998 444444 888899887777777776  889


Q ss_pred             EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecCceE-
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTV-  199 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l-  199 (327)
                      |+..++.+.+.+..+..+     ...|.+++.+|-+..+++++ |++|++||++..++...+.... -..++|+|++++ 
T Consensus        82 IryLsl~dNkylRYF~GH-----~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLif  155 (311)
T KOG1446|consen   82 IRYLSLHDNKYLRYFPGH-----KKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIF  155 (311)
T ss_pred             eEEEEeecCceEEEcCCC-----CceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEE
Confidence            999999999887665443     45699999999888888887 9999999999888777776333 235789999664 


Q ss_pred             EEeCCCCcEEEEEcCCC--ceeEEee---ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCce-
Q psy7482         200 CTGNEESAITAYNLTDG--SHLWQIK---ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRI-  273 (327)
Q Consensus       200 ~~~~~d~~i~i~d~~~~--~~~~~~~---~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v-  273 (327)
                      |++...+.|++||++.-  .+..++.   +.....+.+.|  ||+|++|+.+...+.+++.|.-+|..+.++..+...- 
T Consensus       156 A~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~F--S~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~  233 (311)
T KOG1446|consen  156 ALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEF--SPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGN  233 (311)
T ss_pred             EEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEE--cCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCC
Confidence            55555559999999864  3444443   33667899999  5999999999999999999999999999888775432 


Q ss_pred             --EEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         274 --KGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       274 --~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                        .+..|.|  +++++|+.||+|.+|+++++   .........+..++.|+.|+|.+
T Consensus       234 ~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg---~~v~~~~~~~~~~~~~~~fnP~~  287 (311)
T KOG1446|consen  234 LPLSATFTPDSKFVLSGSDDGTIHVWNLETG---KKVAVLRGPNGGPVSCVRFNPRY  287 (311)
T ss_pred             cceeEEECCCCcEEEEecCCCcEEEEEcCCC---cEeeEecCCCCCCccccccCCce
Confidence              5677888  99999999999999999888   33333334467899999999975

>KOG0647|consensus

Probab=100.00  E-value=1.6e-31  Score=198.46  Aligned_cols=260  Identities=19%  Similarity=0.315  Sum_probs=205.7

Q ss_pred             cccccEEEEEECC-CCCeEEEecCCCcEEEEEcCC-CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC
Q psy7482          52 QHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS-WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        52 ~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  129 (327)
                      ..++.|.+++|+| ...+++.++.|++|++|+++. +.....-...|.++ |.+++|+.||..+++|+.|+.+++||+.+
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~P-vL~v~WsddgskVf~g~~Dk~~k~wDL~S  103 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGP-VLDVCWSDDGSKVFSGGCDKQAKLWDLAS  103 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCC-eEEEEEccCCceEEeeccCCceEEEEccC
Confidence            3567899999999 555677999999999999976 45555443556665 99999999999999999999999999999


Q ss_pred             CceeeeeeccccCccccceEEEEEccCCc--EEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCC
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSPEGL--LYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEES  206 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~  206 (327)
                      ++....-      .|..+|..+.|-+...  .|++|+ |.+|+.||.+...++.++..+.++.++..-. .+++++..++
T Consensus       104 ~Q~~~v~------~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~-pm~vVata~r  176 (347)
T KOG0647|consen  104 GQVSQVA------AHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLY-PMAVVATAER  176 (347)
T ss_pred             CCeeeee------ecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccC-ceeEEEecCC
Confidence            8654332      2345599999987654  889998 9999999999999999999888888876632 5788899999


Q ss_pred             cEEEEEcCCCceeEE-e-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC--ceeEEeecccC---------ce
Q psy7482         207 AITAYNLTDGSHLWQ-I-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG--SHLWHIKASAS---------RI  273 (327)
Q Consensus       207 ~i~i~d~~~~~~~~~-~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~---------~v  273 (327)
                      .|.+|+++++..... . ..-.-.+++++.+  .+....+.|+-+|.+.+..+..+  +.-.+++.|..         .|
T Consensus       177 ~i~vynL~n~~te~k~~~SpLk~Q~R~va~f--~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaV  254 (347)
T KOG0647|consen  177 HIAVYNLENPPTEFKRIESPLKWQTRCVACF--QDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAV  254 (347)
T ss_pred             cEEEEEcCCCcchhhhhcCcccceeeEEEEE--ecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEe
Confidence            999999977643221 1 1122357888887  67777799999999999999886  45566777752         47


Q ss_pred             EEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         274 KGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       274 ~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++++|+|  ..|+|++.||++.+||-+...    +......+..+|+|.+|+.+
T Consensus       255 Nsi~FhP~hgtlvTaGsDGtf~FWDkdar~----kLk~s~~~~qpItcc~fn~~  304 (347)
T KOG0647|consen  255 NSIAFHPVHGTLVTAGSDGTFSFWDKDART----KLKTSETHPQPITCCSFNRN  304 (347)
T ss_pred             cceEeecccceEEEecCCceEEEecchhhh----hhhccCcCCCccceeEecCC
Confidence            7899999  999999999999999988762    22333457788999888765

>KOG0641|consensus

Probab=100.00  E-value=4.4e-30  Score=183.84  Aligned_cols=272  Identities=14%  Similarity=0.205  Sum_probs=215.5

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEc------CCC--------eEEEeEEecccCCceeeEEEecCCCEEEEEeC
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRV------GSW--------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGK  118 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~------~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  118 (327)
                      ....|.+++|+|.|.+.++|+..++++|--.      +.+        .....-.+.|.+. |.|.+|+|+|+++++|+.
T Consensus        31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgs-iyc~~ws~~geliatgsn  109 (350)
T KOG0641|consen   31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGS-IYCTAWSPCGELIATGSN  109 (350)
T ss_pred             chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCcc-EEEEEecCccCeEEecCC
Confidence            4567999999999999999999999888632      111        1122222445556 999999999999999999


Q ss_pred             CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC----CcEEEeec--CCeEEEEEecCCceeeEec-CCCceeEE
Q psy7482         119 DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE----GLLYAIPI--QNKAVVFSVEKAGVLQTLK-SESKVHSV  191 (327)
Q Consensus       119 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~--~~~i~i~d~~~~~~~~~~~-~~~~i~~~  191 (327)
                      |.+|++.-.+...+...-..-....|.+.|..++|-.+    +.+|++++  |..|++-|...++....+. |.+.|.++
T Consensus       110 dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal  189 (350)
T KOG0641|consen  110 DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL  189 (350)
T ss_pred             CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE
Confidence            99999987765443222111122334456999999653    45777775  6788888999999988888 78888877


Q ss_pred             EeecCceEEEeCCCCcEEEEEcCCCceeEEeee--c-----ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE
Q psy7482         192 CFLNETTVCTGNEESAITAYNLTDGSHLWQIKA--S-----ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW  264 (327)
Q Consensus       192 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~-----~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~  264 (327)
                      ---..-++++|+.|.+|++||++-..++.++..  |     ...|.+++.  .|.|++|++|-.|....+||++.++.++
T Consensus       190 yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v--dpsgrll~sg~~dssc~lydirg~r~iq  267 (350)
T KOG0641|consen  190 YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV--DPSGRLLASGHADSSCMLYDIRGGRMIQ  267 (350)
T ss_pred             EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE--CCCcceeeeccCCCceEEEEeeCCceee
Confidence            544457899999999999999998888877632  2     246888888  5999999999999999999999999999


Q ss_pred             EeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCCC
Q psy7482         265 HIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPVV  327 (327)
Q Consensus       265 ~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~~  327 (327)
                      .+..|...|+++.|+|  .++++++.|..|++=|+......+...+....|..++..+.|+|+.+
T Consensus       268 ~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~  332 (350)
T KOG0641|consen  268 RFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDF  332 (350)
T ss_pred             eeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccc
Confidence            9999999999999999  99999999999999999887544555555567888888999999863

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=4.3e-30  Score=216.37  Aligned_cols=264  Identities=14%  Similarity=0.170  Sum_probs=194.9

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE-------------EeEEecccCCceeeEEEec-CCCEEEEEeCCC
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE-------------KLFKKAHKGTAVNHISIHP-SGKLALSVGKDK  120 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-------------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg  120 (327)
                      ..|.....++++..+++++.+.....|+...+..+             ..+ .+|.+. |.+++|+| ++++|++++.|+
T Consensus        21 ~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l-~GH~~~-V~~v~fsP~d~~~LaSgS~Dg   98 (493)
T PTZ00421         21 LNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPIL-LGQEGP-IIDVAFNPFDPQKLFTASEDG   98 (493)
T ss_pred             eccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceE-eCCCCC-EEEEEEcCCCCCEEEEEeCCC
Confidence            34555566667666777777777777775443222             123 677777 99999999 888999999999


Q ss_pred             CEEEEEcCCCceeee--eeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeec
Q psy7482         121 TLRTWNLVKGRSAYI--TNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLN  195 (327)
Q Consensus       121 ~i~iwd~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~  195 (327)
                      .|++||+.++.....  ........|...|.+++|+|++ ++|++++ |+.|++||+++++....+. |...|.+++|+|
T Consensus        99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~sp  178 (493)
T PTZ00421         99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNL  178 (493)
T ss_pred             EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEEC
Confidence            999999976532110  0011122345669999999985 6788776 9999999999999888887 888999999999


Q ss_pred             C-ceEEEeCCCCcEEEEEcCCCceeEEeeecccce-EEEEEEecCCCcEEEEec----CCCeEEEEEcCCCc-eeEEeec
Q psy7482         196 E-TTVCTGNEESAITAYNLTDGSHLWQIKASASRI-KGLVFFSIPQETTVCTGN----EESAITAYNLTDGS-HLWHIKA  268 (327)
Q Consensus       196 ~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~s~~~~~l~~~~----~d~~i~i~d~~~~~-~~~~~~~  268 (327)
                      + .++++++.|+.|++||+++++.+..+.+|.+.. ..+.|.  +++..+++++    .|+.|++||+++.. ++.....
T Consensus       179 dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~--~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~  256 (493)
T PTZ00421        179 DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWA--KRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDL  256 (493)
T ss_pred             CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEc--CCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEecc
Confidence            9 789999999999999999999999998887654 355664  6666666543    57999999998765 4444433


Q ss_pred             cc-CceEEEeeeC--cEEEEEe-cCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         269 SA-SRIKGLASHR--NHLICIT-SAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       269 ~~-~~v~~~~~~~--~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +. ..+....|++  ++|++++ .||.|++||+..+   .+..........++..++|.|.
T Consensus       257 d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~---~~~~~~~~~s~~~~~g~~~~pk  314 (493)
T PTZ00421        257 DQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNE---RLTFCSSYSSVEPHKGLCMMPK  314 (493)
T ss_pred             CCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCC---ceEEEeeccCCCCCcceEeccc
Confidence            33 3455556777  7777777 5999999999987   3433334445567788888875

>KOG0299|consensus

Probab=100.00  E-value=8.3e-31  Score=204.95  Aligned_cols=282  Identities=18%  Similarity=0.275  Sum_probs=231.7

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccc-----------------ccc-ccccccEEEEEECCCCCe
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS-----------------GAL-MQHEGTITCLKFTPEGSH   68 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~-----------------~~~-~~~~~~v~~~~~~~~~~~   68 (327)
                      ....|.-+|.++++  ++++.++++.+|+|.=|++.+++..                 ..- ..|...+.+++.++||++
T Consensus       137 ~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky  216 (479)
T KOG0299|consen  137 VIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY  216 (479)
T ss_pred             eeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE
Confidence            34479999999999  8899999999999999998877532                 001 268889999999999999


Q ss_pred             EEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccce
Q psy7482          69 LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENL  148 (327)
Q Consensus        69 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v  148 (327)
                      |++|+.|..|.||+.++.+.++.+ .+|.+. |.+++|-.....+++++.|+.+++|+++....+..+-     .|.+.|
T Consensus       217 latgg~d~~v~Iw~~~t~ehv~~~-~ghr~~-V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetly-----GHqd~v  289 (479)
T KOG0299|consen  217 LATGGRDRHVQIWDCDTLEHVKVF-KGHRGA-VSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLY-----GHQDGV  289 (479)
T ss_pred             EEecCCCceEEEecCcccchhhcc-cccccc-eeeeeeecCccceeeeecCCceEEEehhHhHHHHHHh-----CCccce
Confidence            999999999999999999999998 999998 9999999988899999999999999998766543332     234558


Q ss_pred             EEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee-c-
Q psy7482         149 DSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA-S-  225 (327)
Q Consensus       149 ~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~-  225 (327)
                      ..+....-++.+.+|. |.++++|++.....+.-..+.+.+.|++|-.+..+++|+.+|.|.+|++...+++.+.+. | 
T Consensus       290 ~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHg  369 (479)
T KOG0299|consen  290 LGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHG  369 (479)
T ss_pred             eeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeecccc
Confidence            8888888888888886 999999999655555555578899999999999999999999999999999988876531 2 


Q ss_pred             ----------ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC----ceeEEeecccCceEEEeeeC--c-EEEEEec
Q psy7482         226 ----------ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG----SHLWHIKASASRIKGLASHR--N-HLICITS  288 (327)
Q Consensus       226 ----------~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~  288 (327)
                                ...|++++..  |...++++|+.+|.|++|.+.++    +++..+. -.+.|++++|++  . .++..+.
T Consensus       370 v~~~~~~~~~~~Witsla~i--~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGk  446 (479)
T KOG0299|consen  370 VIPELDPVNGNFWITSLAVI--PGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGK  446 (479)
T ss_pred             ccCCccccccccceeeeEec--ccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEeccc
Confidence                      1268888885  89999999999999999999887    3555555 567899999988  4 5555555


Q ss_pred             CCcEEEEEccCc
Q psy7482         289 AGDLVVWELNED  300 (327)
Q Consensus       289 dg~v~iw~~~~~  300 (327)
                      .-.+--|-....
T Consensus       447 EhRlGRW~~~k~  458 (479)
T KOG0299|consen  447 EHRLGRWWCLKS  458 (479)
T ss_pred             ccccceeeEeec
Confidence            555655555443

>KOG1036|consensus

Probab=100.00  E-value=2.5e-30  Score=192.74  Aligned_cols=261  Identities=15%  Similarity=0.198  Sum_probs=211.2

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      -.+.|.+|.|  .++.|+.++.||++++||+........++ |..++.+++|.+ ...+++|+-||.|+.+|+.+++...
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~   89 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQ   89 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCCccee
Confidence            3678999999  56677777899999999999886666665 899999999997 5578999999999999999877654


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-cCCeEE
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-IQNKAV  169 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~  169 (327)
                      .  ..|... |.++.+++....+++|+.|++|++||.++......+....      .|.++...  +..|++| .+..+.
T Consensus        90 i--gth~~~-i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~k------kVy~~~v~--g~~LvVg~~~r~v~  158 (323)
T KOG1036|consen   90 I--GTHDEG-IRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGK------KVYCMDVS--GNRLVVGTSDRKVL  158 (323)
T ss_pred             e--ccCCCc-eEEEEeeccCCeEEEcccCccEEEEeccccccccccccCc------eEEEEecc--CCEEEEeecCceEE
Confidence            4  466666 9999999988899999999999999998744433333332      37777765  5566665 599999


Q ss_pred             EEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC----ceeEEeeecc---------cceEEE
Q psy7482         170 VFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG----SHLWQIKASA---------SRIKGL  232 (327)
Q Consensus       170 i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~---------~~v~~~  232 (327)
                      +||+++.....+..   .+..+.++++-|+ .-+++++-||.|.+=.+...    +....|+.|.         -+|.++
T Consensus       159 iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai  238 (323)
T KOG1036|consen  159 IYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAI  238 (323)
T ss_pred             EEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEecee
Confidence            99999877655333   5678999999997 66788899999988666554    3344556664         279999


Q ss_pred             EEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEec
Q psy7482         233 VFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITS  288 (327)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~  288 (327)
                      +|+  |-...|+||+.||.|.+||+.+.+.+..+......|.+++|+.  ..||.++.
T Consensus       239 ~Fh--p~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s  294 (323)
T KOG1036|consen  239 AFH--PIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS  294 (323)
T ss_pred             Eec--cccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence            997  7889999999999999999999999999988888899999998  88888874

>KOG1063|consensus

Probab=100.00  E-value=1.3e-30  Score=213.42  Aligned_cols=318  Identities=16%  Similarity=0.235  Sum_probs=241.4

Q ss_pred             EEEeeeeccCCccEEEEEe-----CCCEEEEecCCCeEEEEEccccc------------------------cc-------
Q psy7482           4 LTQTFVTHSHTASVRSVAA-----TSKLAASSGADETVVLYDMVKRK------------------------QS-------   47 (327)
Q Consensus         4 ~~~~~~~~~h~~~v~~~~~-----~~~~l~~~~~dg~v~~w~~~~~~------------------------~~-------   47 (327)
                      +.+...+.||.+.|.+++|     +.-+||++|.|..||||.+.-+.                        .+       
T Consensus       181 f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~e  260 (764)
T KOG1063|consen  181 FARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFE  260 (764)
T ss_pred             eeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehh
Confidence            4556677799999999999     34588999999999999864322                        00       


Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC--eEEEeEEe---cccCCceeeEEEecCCCEEEEEeCCCCE
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKLFKK---AHKGTAVNHISIHPSGKLALSVGKDKTL  122 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i  122 (327)
                      ..+.+|++.|.++.|+|.+..|++++.|.++.+|...+.  --+.....   ++.........|+|+++.+++-+..|..
T Consensus       261 all~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~  340 (764)
T KOG1063|consen  261 ALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGF  340 (764)
T ss_pred             hhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcE
Confidence            123489999999999999999999999999999987654  22222211   2222237888999999999999999999


Q ss_pred             EEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecC--------------------------
Q psy7482         123 RTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEK--------------------------  175 (327)
Q Consensus       123 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~--------------------------  175 (327)
                      ++|....  ...-...+....|.+.|.+++|+|.|.+|.+.+ |.+-++|-.-.                          
T Consensus       341 hlWkt~d--~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~  418 (764)
T KOG1063|consen  341 HLWKTKD--KTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNE  418 (764)
T ss_pred             EEEeccC--ccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccC
Confidence            9998322  112222333455677799999999999888776 77666643210                          


Q ss_pred             ---------------------------------------------------------------Cc---------------
Q psy7482         176 ---------------------------------------------------------------AG---------------  177 (327)
Q Consensus       176 ---------------------------------------------------------------~~---------------  177 (327)
                                                                                     |.               
T Consensus       419 ~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~  498 (764)
T KOG1063|consen  419 DLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPC  498 (764)
T ss_pred             CceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCch
Confidence                                                                           00               


Q ss_pred             -------------------eeeEecCCCceeEEEeecC-ceEEEeCCC-----CcEEEEEcCCCceeEEeeecccceEEE
Q psy7482         178 -------------------VLQTLKSESKVHSVCFLNE-TTVCTGNEE-----SAITAYNLTDGSHLWQIKASASRIKGL  232 (327)
Q Consensus       178 -------------------~~~~~~~~~~i~~~~~~~~-~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~v~~~  232 (327)
                                         ..+.+.|...|.+++.+|+ +++++++..     ..|++|+..+...+..+.+|.-.|+.+
T Consensus       499 ~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l  578 (764)
T KOG1063|consen  499 ELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRL  578 (764)
T ss_pred             hccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEE
Confidence                               0000225667999999998 777777643     358999999999899999999999999


Q ss_pred             EEEecCCCcEEEEecCCCeEEEEEcCCCc----eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCce
Q psy7482         233 VFFSIPQETTVCTGNEESAITAYNLTDGS----HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQ  306 (327)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~  306 (327)
                      +|  ||||++|++.+.|.++.+|......    .....+.|..-|++..|+|  .+++|+|.|.+|++|.......+...
T Consensus       579 ~F--Spdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~  656 (764)
T KOG1063|consen  579 AF--SPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYIS  656 (764)
T ss_pred             EE--CCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhh
Confidence            99  5999999999999999999875543    2334778999999999999  77999999999999999887433444


Q ss_pred             eeeecCCCCceEEEEeCCC
Q psy7482         307 RVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       307 ~~~~~~~~~~i~~l~~~p~  325 (327)
                      .+.....+..|+.++|.|-
T Consensus       657 ~~a~~~~~~aVTAv~~~~~  675 (764)
T KOG1063|consen  657 RFACLKFSLAVTAVAYLPV  675 (764)
T ss_pred             hhchhccCCceeeEEeecc
Confidence            4445667888999999874

>KOG0299|consensus

Probab=100.00  E-value=5.5e-31  Score=205.94  Aligned_cols=268  Identities=15%  Similarity=0.262  Sum_probs=218.8

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe-EE----------------ecccCCceeeEEEecC
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL-FK----------------KAHKGTAVNHISIHPS  109 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~----------------~~~~~~~v~~~~~~~~  109 (327)
                      ...+..|.-++.+++++|++++.++++.+++|.-|++.+++.... ++                ..|... +.+++.++|
T Consensus       135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~ke-il~~avS~D  213 (479)
T KOG0299|consen  135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKE-ILTLAVSSD  213 (479)
T ss_pred             ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccce-eEEEEEcCC
Confidence            455667999999999999999999999999999999987764311 10                145555 999999999


Q ss_pred             CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCc
Q psy7482         110 GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESK  187 (327)
Q Consensus       110 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~  187 (327)
                      +++|++|+.|..|.||+.++.+.+..+     ..|.+.|.+++|-.....+.+++ |..+++|++.....+.++- |+..
T Consensus       214 gkylatgg~d~~v~Iw~~~t~ehv~~~-----~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~  288 (479)
T KOG0299|consen  214 GKYLATGGRDRHVQIWDCDTLEHVKVF-----KGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDG  288 (479)
T ss_pred             CcEEEecCCCceEEEecCcccchhhcc-----cccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccc
Confidence            999999999999999999999886663     33455699999988666555555 9999999999888777665 9999


Q ss_pred             eeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe
Q psy7482         188 VHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI  266 (327)
Q Consensus       188 i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  266 (327)
                      |.++....- ..+-+|+.|+++++|++... ....+.++.+.+.+++|   -+...+++|+.+|.|.+|++...+++++.
T Consensus       289 v~~IdaL~reR~vtVGgrDrT~rlwKi~ee-sqlifrg~~~sidcv~~---In~~HfvsGSdnG~IaLWs~~KKkplf~~  364 (479)
T KOG0299|consen  289 VLGIDALSRERCVTVGGRDRTVRLWKIPEE-SQLIFRGGEGSIDCVAF---INDEHFVSGSDNGSIALWSLLKKKPLFTS  364 (479)
T ss_pred             eeeechhcccceEEeccccceeEEEecccc-ceeeeeCCCCCeeeEEE---ecccceeeccCCceEEEeeecccCceeEe
Confidence            999988766 45556669999999999543 34457788989999999   68899999999999999999999888766


Q ss_pred             e-ccc-----------CceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         267 K-ASA-----------SRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       267 ~-~~~-----------~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      . +|.           ..|++++..|  +++++|+.+|.|++|.+..+. ....++......+-|++|+|+++
T Consensus       365 ~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~-r~i~~l~~ls~~GfVNsl~f~~s  436 (479)
T KOG0299|consen  365 RLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGL-RAINLLYSLSLVGFVNSLAFSNS  436 (479)
T ss_pred             eccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCc-cccceeeecccccEEEEEEEccC
Confidence            5 221           2788999988  999999999999999999884 23445555556778999999876

>KOG0640|consensus

Probab=100.00  E-value=2.3e-31  Score=198.64  Aligned_cols=267  Identities=15%  Similarity=0.263  Sum_probs=214.4

Q ss_pred             ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC------------C------eEEEeEEecccCCceeeEEEecCC
Q psy7482          49 ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS------------W------QLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        49 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~------------~------~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      .+..|..++.+.+|+|||.++++|+.|..|+|.|++.            +      -.++++ ..|.+. |+++.|+|..
T Consensus       107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTl-YDH~de-vn~l~FHPre  184 (430)
T KOG0640|consen  107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTL-YDHVDE-VNDLDFHPRE  184 (430)
T ss_pred             EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeeh-hhccCc-ccceeecchh
Confidence            3557999999999999999999999999999999861            1      234555 677777 9999999999


Q ss_pred             CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec----CC
Q psy7482         111 KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK----SE  185 (327)
Q Consensus       111 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~----~~  185 (327)
                      ..|++++.|++|++||.........++.-..   ..++.++.|+|.|.++++|. -..+++||+.+.++...-.    |.
T Consensus       185 ~ILiS~srD~tvKlFDfsK~saKrA~K~~qd---~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht  261 (430)
T KOG0640|consen  185 TILISGSRDNTVKLFDFSKTSAKRAFKVFQD---TEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHT  261 (430)
T ss_pred             heEEeccCCCeEEEEecccHHHHHHHHHhhc---cceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccc
Confidence            9999999999999999976544333333322   34599999999999999998 5789999999988765543    77


Q ss_pred             CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEe-eeccc-ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         186 SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQI-KASAS-RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       186 ~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~-~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      +.|+++.+++. ++.++++.||.|++||--+++++.++ +.|.+ .|.+..|  +.+++++++.+.|..+++|.+.++++
T Consensus       262 ~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~F--tkn~kyiLsSG~DS~vkLWEi~t~R~  339 (430)
T KOG0640|consen  262 GAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVF--TKNGKYILSSGKDSTVKLWEISTGRM  339 (430)
T ss_pred             cceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEE--ccCCeEEeecCCcceeeeeeecCCce
Confidence            89999999998 88999999999999999889998888 45654 5777777  48999999999999999999999999


Q ss_pred             eEEeeccc-----CceEEEeeeC--cEEEEEec-CCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         263 LWHIKASA-----SRIKGLASHR--NHLICITS-AGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       263 ~~~~~~~~-----~~v~~~~~~~--~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +.++.+..     ..-+...|+.  .+++.-.+ .+.+.-||.++..   -..+....|.+.+.++.-+|.
T Consensus       340 l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtad---r~~l~slgHn~a~R~i~HSP~  407 (430)
T KOG0640|consen  340 LKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTAD---RVALLSLGHNGAVRWIVHSPV  407 (430)
T ss_pred             EEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchh---hhhhcccCCCCCceEEEeCCC
Confidence            99887642     1123344655  66666554 4669999999883   333445668888888888885

>KOG0275|consensus

Probab=100.00  E-value=3.2e-32  Score=204.68  Aligned_cols=237  Identities=16%  Similarity=0.261  Sum_probs=214.2

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc-cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      -|.++|.|++|  |..++|+|+.||.|++|.+.+|.+++.+. .|+..|+|+.|+.|+..+++++.|.++++.-+.+|++
T Consensus       261 Mmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~  340 (508)
T KOG0275|consen  261 MMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKC  340 (508)
T ss_pred             ecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchh
Confidence            37899999999  89999999999999999999999999998 7999999999999999999999999999999999999


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-cEEEeec-CC
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QN  166 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~  166 (327)
                      ++.+ .+|... |+...|.++|..+++++.||+|++|+..+.+++..++....   ..+|+++..-|.+ ..++++. .+
T Consensus       341 LKEf-rGHsSy-vn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~---d~~vnsv~~~PKnpeh~iVCNrsn  415 (508)
T KOG0275|consen  341 LKEF-RGHSSY-VNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGT---DYPVNSVILLPKNPEHFIVCNRSN  415 (508)
T ss_pred             HHHh-cCcccc-ccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCC---cccceeEEEcCCCCceEEEEcCCC
Confidence            9999 999999 99999999999999999999999999999999888766654   3458888888854 5777776 88


Q ss_pred             eEEEEEecCCceeeEec----CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCc
Q psy7482         167 KAVVFSVEKAGVLQTLK----SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET  241 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~----~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~  241 (327)
                      ++++.++. |+.++.+.    ..+...+.+.+|. ..+.+.++|+.++.|...+|+.-+++..|+..+..++-+  |..+
T Consensus       416 tv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HH--PHqN  492 (508)
T KOG0275|consen  416 TVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHH--PHQN  492 (508)
T ss_pred             eEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccC--cccc
Confidence            99999875 77777776    3456777888998 788999999999999999999999999999999999986  8999


Q ss_pred             EEEEecCCCeEEEEE
Q psy7482         242 TVCTGNEESAITAYN  256 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d  256 (327)
                      .+|+-++||.+++|.
T Consensus       493 llAsYsEDgllKLWk  507 (508)
T KOG0275|consen  493 LLASYSEDGLLKLWK  507 (508)
T ss_pred             hhhhhcccchhhhcC
Confidence            999999999999995

>KOG0300|consensus

Probab=100.00  E-value=2.9e-31  Score=198.92  Aligned_cols=275  Identities=17%  Similarity=0.249  Sum_probs=225.7

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      +.++.+.+|.+.|..++-......+.+++.|.+.+||.++++.++..+ .+|.+. |+++.|++.+.++++++.|++-+|
T Consensus       139 ~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y-~GH~GS-VNsikfh~s~~L~lTaSGD~taHI  216 (481)
T KOG0300|consen  139 RLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATY-TGHTGS-VNSIKFHNSGLLLLTASGDETAHI  216 (481)
T ss_pred             eehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeee-cccccc-eeeEEeccccceEEEccCCcchHH
Confidence            456778899999999998877778999999999999999999999999 999999 999999999999999999999999


Q ss_pred             EEcC------CC--------c---------------------eeeeeeccccCccccceEEEEEccCCcEEEeec-CCeE
Q psy7482         125 WNLV------KG--------R---------------------SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKA  168 (327)
Q Consensus       125 wd~~------~~--------~---------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i  168 (327)
                      |...      ..        +                     .....++-....|...|.+..|-..|+.+++++ |.+.
T Consensus       217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTA  296 (481)
T KOG0300|consen  217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTA  296 (481)
T ss_pred             HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccc
Confidence            9721      10        0                     000111111233456677888888899999998 9999


Q ss_pred             EEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC-ceeEEeeecccceEEEEEEecCCCcEEEE
Q psy7482         169 VVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG-SHLWQIKASASRIKGLVFFSIPQETTVCT  245 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~s~~~~~l~~  245 (327)
                      .+||+++++++..+. |....+.++-+|. .++++++.|.+.++||++.. ..+..|++|...|++..|   ..+..+++
T Consensus       297 nlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF---~~dd~vVS  373 (481)
T KOG0300|consen  297 NLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVF---NTDDRVVS  373 (481)
T ss_pred             eeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEE---ecCCceee
Confidence            999999999999998 8889999999998 77889999999999999854 336778999999999999   57888999


Q ss_pred             ecCCCeEEEEEcCCCc-eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEe
Q psy7482         246 GNEESAITAYNLTDGS-HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAI  322 (327)
Q Consensus       246 ~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~  322 (327)
                      |+.|.+|++||+++.. ++.++.. ..+++.++.+.  ..|+.--++..|++||++..............|...|+|++|
T Consensus       374 gSDDrTvKvWdLrNMRsplATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW  452 (481)
T KOG0300|consen  374 GSDDRTVKVWDLRNMRSPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAW  452 (481)
T ss_pred             cCCCceEEEeeeccccCcceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeec
Confidence            9999999999999876 6666664 44888888887  567777677789999999884333333345567788999999


Q ss_pred             CCC
Q psy7482         323 RPP  325 (327)
Q Consensus       323 ~p~  325 (327)
                      ..+
T Consensus       453 ~ee  455 (481)
T KOG0300|consen  453 LEE  455 (481)
T ss_pred             ccc
Confidence            864

>KOG0288|consensus

Probab=100.00  E-value=1.3e-31  Score=206.78  Aligned_cols=232  Identities=19%  Similarity=0.254  Sum_probs=204.2

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      .|-.++|+++.|  ++..+++++.|+.+++|++.+.+...++.+|++.|+++.|......+++|+.|.+|++||+....+
T Consensus       216 aGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C  295 (459)
T KOG0288|consen  216 AGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYC  295 (459)
T ss_pred             hccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhhe
Confidence            367788999999  888999999999999999999999999999999999999988766799999999999999999888


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCe
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNK  167 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~  167 (327)
                      .+++.....   +..+..+  ...+++|..|+.|++||.++.......+..+.      |.++..++++..+.+++ |.+
T Consensus       296 ~kt~l~~S~---cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~------vtSl~ls~~g~~lLsssRDdt  364 (459)
T KOG0288|consen  296 SKTVLPGSQ---CNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGGR------VTSLDLSMDGLELLSSSRDDT  364 (459)
T ss_pred             ecccccccc---ccceEec--ceeeeecccccceEEEeccCCceeeEeecCcc------eeeEeeccCCeEEeeecCCCc
Confidence            777622222   6666665  55789999999999999999999888877765      99999999998888877 999


Q ss_pred             EEEEEecCCceeeEec-----CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeeccc--ceEEEEEEecCC
Q psy7482         168 AVVFSVEKAGVLQTLK-----SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASAS--RIKGLVFFSIPQ  239 (327)
Q Consensus       168 i~i~d~~~~~~~~~~~-----~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~s~~  239 (327)
                      +.+.|+++.+....+.     .....+.+.|||+ .|+++|+.||.|+||++.++++...+.....  .|++++|.  |.
T Consensus       365 l~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~--~s  442 (459)
T KOG0288|consen  365 LKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWN--PS  442 (459)
T ss_pred             eeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEc--CC
Confidence            9999999999888876     3455889999999 8999999999999999999999888765444  49999995  89


Q ss_pred             CcEEEEecCCCeEEEE
Q psy7482         240 ETTVCTGNEESAITAY  255 (327)
Q Consensus       240 ~~~l~~~~~d~~i~i~  255 (327)
                      |..|++++.++.+.+|
T Consensus       443 G~~Llsadk~~~v~lW  458 (459)
T KOG0288|consen  443 GSGLLSADKQKAVTLW  458 (459)
T ss_pred             CchhhcccCCcceEec
Confidence            9999999999999998

>KOG0641|consensus

Probab=100.00  E-value=3e-28  Score=174.49  Aligned_cols=277  Identities=17%  Similarity=0.268  Sum_probs=218.9

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccc------cc-----c----ccccccccccEEEEEECCCCCeEEEecC
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVK------RK-----Q----SGALMQHEGTITCLKFTPEGSHLISCSD   74 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~------~~-----~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~   74 (327)
                      ..+..|.+++|  .|.+.|+|+...+.+|-....      +.     +    ...-+.|.+.|.|.+|+|+|++|++|+.
T Consensus        30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsn  109 (350)
T KOG0641|consen   30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSN  109 (350)
T ss_pred             cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCC
Confidence            36788999999  899999999999999875332      11     1    1223468999999999999999999999


Q ss_pred             CCcEEEEEcCCCeE-----EEeEEecccCCceeeEEEecC----CCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCcc
Q psy7482          75 DGSIAIFRVGSWQL-----EKLFKKAHKGTAVNHISIHPS----GKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVG  144 (327)
Q Consensus        75 d~~i~iw~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~  144 (327)
                      |++|++...+....     ...+ ..|.+. |..++|..+    +.+|++++. |..|++-|...|+....+.     .|
T Consensus       110 dk~ik~l~fn~dt~~~~g~dle~-nmhdgt-irdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~s-----gh  182 (350)
T KOG0641|consen  110 DKTIKVLPFNADTCNATGHDLEF-NMHDGT-IRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALS-----GH  182 (350)
T ss_pred             CceEEEEecccccccccCcceee-eecCCc-eeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeec-----CC
Confidence            99999987653221     1234 567777 999999764    456777654 5567777777776644432     22


Q ss_pred             ccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec---C-----CCceeEEEeecC-ceEEEeCCCCcEEEEEcC
Q psy7482         145 FENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK---S-----ESKVHSVCFLNE-TTVCTGNEESAITAYNLT  214 (327)
Q Consensus       145 ~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~-----~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~  214 (327)
                      .+.|.++ ++-++-.+++|+ |.+|++||++-...+.++.   +     .+.|.+++..|. .+|++|..|....+||++
T Consensus       183 tghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydir  261 (350)
T KOG0641|consen  183 TGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIR  261 (350)
T ss_pred             cccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEee
Confidence            3336665 344678899998 9999999999988888775   2     357899999998 778899999999999999


Q ss_pred             CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC----ceeEEeecccCceEEEeeeC--cEEEEEec
Q psy7482         215 DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG----SHLWHIKASASRIKGLASHR--NHLICITS  288 (327)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~--~~l~~~~~  288 (327)
                      .+++++.+..|...|.++.|  +|...|+++++.|..|++-|++..    -++.....|...+..+.|+|  -.+++.+.
T Consensus       262 g~r~iq~f~phsadir~vrf--sp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssa  339 (350)
T KOG0641|consen  262 GGRMIQRFHPHSADIRCVRF--SPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSA  339 (350)
T ss_pred             CCceeeeeCCCccceeEEEe--CCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccC
Confidence            99999999999999999999  489999999999999999998642    14556667889999999999  56788899


Q ss_pred             CCcEEEEEcc
Q psy7482         289 AGDLVVWELN  298 (327)
Q Consensus       289 dg~v~iw~~~  298 (327)
                      |.++.+|-++
T Consensus       340 dkt~tlwa~~  349 (350)
T KOG0641|consen  340 DKTATLWALN  349 (350)
T ss_pred             cceEEEeccC
Confidence            9999999875

>KOG1539|consensus

Probab=99.98  E-value=2.7e-29  Score=209.74  Aligned_cols=311  Identities=15%  Similarity=0.254  Sum_probs=252.1

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCe-EEEecCCCcEEEEE
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH-LISCSDDGSIAIFR   82 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iw~   82 (327)
                      ..+.++++.+.|+++..  -=..+|.|..+|+|.+++++.++.+.+++...+.|++++|.-||+. +++|+..|.+.+||
T Consensus       194 ~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wD  273 (910)
T KOG1539|consen  194 VVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWD  273 (910)
T ss_pred             EEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEE
Confidence            34566688899999988  5578999999999999999999999999865699999999999875 56777789999999


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce-----------------e------------
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS-----------------A------------  133 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-----------------~------------  133 (327)
                      ++..+........|.+. |....|.|....+++++.|+.+++|=.+++..                 +            
T Consensus       274 Le~kkl~~v~~nah~~s-v~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ils  352 (910)
T KOG1539|consen  274 LEKKKLINVTRNAHYGS-VTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILS  352 (910)
T ss_pred             cCCCeeeeeeeccccCC-cccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEe
Confidence            99888888776677676 88888888777888888888777764432110                 0            


Q ss_pred             ------------------------------------------------------------------------eeeecccc
Q psy7482         134 ------------------------------------------------------------------------YITNLSSY  141 (327)
Q Consensus       134 ------------------------------------------------------------------------~~~~~~~~  141 (327)
                                                                                              ........
T Consensus       353 a~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~  432 (910)
T KOG1539|consen  353 AKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNK  432 (910)
T ss_pred             cccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCc
Confidence                                                                                    00000000


Q ss_pred             ------------CccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe----cCCCceeEEEeecC-ceEEEeC
Q psy7482         142 ------------GVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL----KSESKVHSVCFLNE-TTVCTGN  203 (327)
Q Consensus       142 ------------~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~----~~~~~i~~~~~~~~-~~l~~~~  203 (327)
                                  ......+.+++.++-|++.+.|+ .|.|-+|++++|-....+    .|..+|+.++...- ..+++++
T Consensus       433 ~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~  512 (910)
T KOG1539|consen  433 TSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAG  512 (910)
T ss_pred             ccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEcc
Confidence                        00002367888888899888886 899999999999988888    38999999999775 7899999


Q ss_pred             CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--c
Q psy7482         204 EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--N  281 (327)
Q Consensus       204 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~  281 (327)
                      .+|.+.+||......+..++.. ..+..+.++  .....++.+..|-.|+++|..+.+.++.+.+|.+.|++++|+|  +
T Consensus       513 ~~Gilkfw~f~~k~l~~~l~l~-~~~~~iv~h--r~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~Dgr  589 (910)
T KOG1539|consen  513 ADGILKFWDFKKKVLKKSLRLG-SSITGIVYH--RVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGR  589 (910)
T ss_pred             CcceEEEEecCCcceeeeeccC-CCcceeeee--ehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCc
Confidence            9999999999988877777643 346777775  6778899999999999999999999999999999999999999  9


Q ss_pred             EEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         282 HLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       282 ~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +|++++.|++|++||+.++     ..+-......+.+++.|+|+
T Consensus       590 WlisasmD~tIr~wDlpt~-----~lID~~~vd~~~~sls~SPn  628 (910)
T KOG1539|consen  590 WLISASMDSTIRTWDLPTG-----TLIDGLLVDSPCTSLSFSPN  628 (910)
T ss_pred             EEEEeecCCcEEEEeccCc-----ceeeeEecCCcceeeEECCC
Confidence            9999999999999999999     44444455667899999997

>KOG0264|consensus

Probab=99.98  E-value=1.8e-30  Score=202.88  Aligned_cols=246  Identities=13%  Similarity=0.291  Sum_probs=196.6

Q ss_pred             cccccEEEEEECCCC-CeEEEecCCCcEEEEEcCCCe----------EEEeEEecccCCceeeEEEecC-CCEEEEEeCC
Q psy7482          52 QHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSWQ----------LEKLFKKAHKGTAVNHISIHPS-GKLALSVGKD  119 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~----------~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d  119 (327)
                      .|.+.|+.+++.|.. ..+++.+..+.+.|||.....          +...+ .+|.+. -.+++|++. .-.|++++.|
T Consensus       122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L-~gH~~e-g~glsWn~~~~g~Lls~~~d  199 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRL-KGHEKE-GYGLSWNRQQEGTLLSGSDD  199 (422)
T ss_pred             cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEE-Eeeccc-ccccccccccceeEeeccCC
Confidence            488999999999955 466778889999999985421          12245 778775 688999984 4579999999


Q ss_pred             CCEEEEEcCCCcee--eeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecC--CceeeEec-CCCceeEEE
Q psy7482         120 KTLRTWNLVKGRSA--YITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEK--AGVLQTLK-SESKVHSVC  192 (327)
Q Consensus       120 g~i~iwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~--~~~~~~~~-~~~~i~~~~  192 (327)
                      +.|.+||+......  ..........|...|..++|++-. .+|++++ |+.+.|||+++  .++..... |.+++.|++
T Consensus       200 ~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~  279 (422)
T KOG0264|consen  200 HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVA  279 (422)
T ss_pred             CcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEE
Confidence            99999999764431  111122224556779999999955 4555555 89999999994  44445555 899999999


Q ss_pred             eecC--ceEEEeCCCCcEEEEEcCCCc-eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC----------
Q psy7482         193 FLNE--TTVCTGNEESAITAYNLTDGS-HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD----------  259 (327)
Q Consensus       193 ~~~~--~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~----------  259 (327)
                      |+|-  ..|++|+.|++|.+||+++.. ++.++.+|...|.++.|+| .....||+++.|+.+.+||+..          
T Consensus       280 fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSP-h~etvLASSg~D~rl~vWDls~ig~eq~~eda  358 (422)
T KOG0264|consen  280 FNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSP-HNETVLASSGTDRRLNVWDLSRIGEEQSPEDA  358 (422)
T ss_pred             eCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCC-CCCceeEecccCCcEEEEeccccccccChhhh
Confidence            9995  689999999999999999864 5889999999999999975 5678899999999999999853          


Q ss_pred             ----CceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCc
Q psy7482         260 ----GSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       260 ----~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~  300 (327)
                          .+++..-.||...|..+.|+|   ..|+++++|+.+.||++...
T Consensus       359 ~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~~  406 (422)
T KOG0264|consen  359 EDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAEN  406 (422)
T ss_pred             ccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecccc
Confidence                124577789999999999999   78999999999999999854

>KOG1408|consensus

Probab=99.97  E-value=5.3e-30  Score=211.02  Aligned_cols=282  Identities=15%  Similarity=0.265  Sum_probs=220.9

Q ss_pred             ccCCccEEEEEe-------------CCCEEEEecCCCeEEEEEcccccccc-----------------------------
Q psy7482          11 HSHTASVRSVAA-------------TSKLAASSGADETVVLYDMVKRKQSG-----------------------------   48 (327)
Q Consensus        11 ~~h~~~v~~~~~-------------~~~~l~~~~~dg~v~~w~~~~~~~~~-----------------------------   48 (327)
                      --|+..|+.+.-             -..-+.|++.|++||+||+..+..-.                             
T Consensus       366 lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~  445 (1080)
T KOG1408|consen  366 LYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASA  445 (1080)
T ss_pred             eeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccC
Confidence            347777776654             12358899999999999987521100                             


Q ss_pred             --------ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec---CCCEEEEEe
Q psy7482          49 --------ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP---SGKLALSVG  117 (327)
Q Consensus        49 --------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~  117 (327)
                              ...+....+.+++.+|+|++||+|..-|++++|++.+.+....+ ..|... |.|+.|+.   ..++|++++
T Consensus       446 ~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~-eAHesE-ilcLeyS~p~~~~kLLASas  523 (1080)
T KOG1408|consen  446 GIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFM-EAHESE-ILCLEYSFPVLTNKLLASAS  523 (1080)
T ss_pred             CcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhhe-ecccce-eEEEeecCchhhhHhhhhcc
Confidence                    00112346899999999999999999999999999988888777 888888 99999986   357899999


Q ss_pred             CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC--cEEEee-cCCeEEEEEecCCceeeEec------CCCce
Q psy7482         118 KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG--LLYAIP-IQNKAVVFSVEKAGVLQTLK------SESKV  188 (327)
Q Consensus       118 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~-~~~~i~i~d~~~~~~~~~~~------~~~~i  188 (327)
                      .|.-|++||+...-.+    ......|...|+++.|..+|  ..++++ .|..|.+--.+.......+.      ....+
T Consensus       524 rdRlIHV~Dv~rny~l----~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTl  599 (1080)
T KOG1408|consen  524 RDRLIHVYDVKRNYDL----VQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTL  599 (1080)
T ss_pred             CCceEEEEecccccch----hhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceE
Confidence            9999999998643221    12223345569999998877  444444 47766543333211111111      35678


Q ss_pred             eEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee---cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE
Q psy7482         189 HSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA---SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW  264 (327)
Q Consensus       189 ~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~  264 (327)
                      ..++..|. +++++++.|..|+|||+.+++..+.|++   |++....+..  +|.|-|+++...|.++.++|..+++++.
T Consensus       600 YDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~l--DPSgiY~atScsdktl~~~Df~sgEcvA  677 (1080)
T KOG1408|consen  600 YDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVIL--DPSGIYLATSCSDKTLCFVDFVSGECVA  677 (1080)
T ss_pred             EEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEE--CCCccEEEEeecCCceEEEEeccchhhh
Confidence            99999998 9999999999999999999999999965   5555656666  5999999999999999999999999999


Q ss_pred             EeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         265 HIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       265 ~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++.+|.+.|+.+.|.+  +.|++++.||.|.||.+...
T Consensus       678 ~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~~  715 (1080)
T KOG1408|consen  678 QMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPLT  715 (1080)
T ss_pred             hhcCcchheeeeeecccchhheeecCCceEEEEECchh
Confidence            9999999999999999  99999999999999998764

>KOG0264|consensus

Probab=99.97  E-value=6.4e-30  Score=199.75  Aligned_cols=242  Identities=18%  Similarity=0.315  Sum_probs=194.1

Q ss_pred             cCCccEEEEEe---CCCEEEEecCCCeEEEEEccccc----------cccccccccccEEEEEECCC-CCeEEEecCCCc
Q psy7482          12 SHTASVRSVAA---TSKLAASSGADETVVLYDMVKRK----------QSGALMQHEGTITCLKFTPE-GSHLISCSDDGS   77 (327)
Q Consensus        12 ~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~----------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~   77 (327)
                      -|.+.|+.+.+   +..++|+++..+.|.|||..+..          +-..+.+|...-..++|++. .-.|++++.|+.
T Consensus       122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~  201 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT  201 (422)
T ss_pred             cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence            48999999888   88899999999999999986532          22367889998889999994 347899999999


Q ss_pred             EEEEEcCCCeE-------EEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          78 IAIFRVGSWQL-------EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        78 i~iw~~~~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      |++||+.....       ...+ .+|... |..++|++ +..++++++.|+.+.|||++++..   ........|..++.
T Consensus       202 i~lwdi~~~~~~~~~~~p~~~~-~~h~~~-VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~---~~~~~~~ah~~~vn  276 (422)
T KOG0264|consen  202 ICLWDINAESKEDKVVDPKTIF-SGHEDV-VEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTS---KPSHSVKAHSAEVN  276 (422)
T ss_pred             EEEEeccccccCCccccceEEe-ecCCcc-eehhhccccchhhheeecCCCeEEEEEcCCCCC---CCcccccccCCcee
Confidence            99999965332       2334 788888 99999999 567899999999999999996421   11222344566799


Q ss_pred             EEEEccC-CcEEEeec-CCeEEEEEecCCc-eeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCC-------
Q psy7482         150 SVVWSPE-GLLYAIPI-QNKAVVFSVEKAG-VLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDG-------  216 (327)
Q Consensus       150 ~~~~~~~-~~~l~~~~-~~~i~i~d~~~~~-~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~-------  216 (327)
                      |++|+|- +.+||+|+ |++|.+||+++.. ++..+. |...|..+.|+|+  ..|++++.|+.+.+||+..-       
T Consensus       277 ~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~e  356 (422)
T KOG0264|consen  277 CVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPE  356 (422)
T ss_pred             EEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChh
Confidence            9999995 46778887 9999999999754 556666 8999999999997  78999999999999998642       


Q ss_pred             -------ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         217 -------SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       217 -------~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                             +.+..-.+|...|..+.|+| ...-.+++.++|+.+.||+...
T Consensus       357 da~dgppEllF~HgGH~~kV~DfsWnp-~ePW~I~SvaeDN~LqIW~~s~  405 (422)
T KOG0264|consen  357 DAEDGPPELLFIHGGHTAKVSDFSWNP-NEPWTIASVAEDNILQIWQMAE  405 (422)
T ss_pred             hhccCCcceeEEecCcccccccccCCC-CCCeEEEEecCCceEEEeeccc
Confidence                   23455578999999999974 4556688899999999999753

>KOG0973|consensus

Probab=99.97  E-value=1.1e-29  Score=217.81  Aligned_cols=249  Identities=20%  Similarity=0.295  Sum_probs=206.9

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccc------------------cccccccccccccEEEEEECCCCCe
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVK------------------RKQSGALMQHEGTITCLKFTPEGSH   68 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~   68 (327)
                      ....|.+.|+|+.|  ||++||+|+.|+.|.||+...                  .+....+.+|...|..++|+|++.+
T Consensus        64 ~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~  143 (942)
T KOG0973|consen   64 TMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSL  143 (942)
T ss_pred             eeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccE
Confidence            34579999999999  999999999999999998762                  1245678899999999999999999


Q ss_pred             EEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc-Cccccc
Q psy7482          69 LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY-GVGFEN  147 (327)
Q Consensus        69 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~  147 (327)
                      |++++.|++|.+||..+.+.+..+ .+|... |..+.|.|-|++|++-+.|++|++|+..+-.....+..+.. ......
T Consensus       144 lvS~s~DnsViiwn~~tF~~~~vl-~~H~s~-VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~  221 (942)
T KOG0973|consen  144 LVSVSLDNSVIIWNAKTFELLKVL-RGHQSL-VKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTF  221 (942)
T ss_pred             EEEecccceEEEEccccceeeeee-eccccc-ccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcce
Confidence            999999999999999999999998 999998 99999999999999999999999999766444333322221 222334


Q ss_pred             eEEEEEccCCcEEEeec-----CCeEEEEEecCCceeeEec-CCCceeEEEeecC------c------------eEEEeC
Q psy7482         148 LDSVVWSPEGLLYAIPI-----QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE------T------------TVCTGN  203 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~------~------------~l~~~~  203 (327)
                      +..+.|+|||++|++..     ...+.|.+-.+-+.-..+- |.+++.++.|+|.      +            .+++|+
T Consensus       222 f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgS  301 (942)
T KOG0973|consen  222 FLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGS  301 (942)
T ss_pred             eeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEec
Confidence            88999999999999974     2478888877766555544 9999999999862      3            578899


Q ss_pred             CCCcEEEEEcCCCceeEEe-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         204 EESAITAYNLTDGSHLWQI-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       204 ~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      .|++|.||.....+++... .-....|.+++|+  |||..|+++|.||+|.++.++..+
T Consensus       302 qDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWs--pdG~~LfacS~DGtV~~i~Fee~E  358 (942)
T KOG0973|consen  302 QDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWS--PDGFSLFACSLDGTVALIHFEEKE  358 (942)
T ss_pred             CCccEEEEecCCCCchhhhhhhhcCceeeeeEc--CCCCeEEEEecCCeEEEEEcchHH
Confidence            9999999999887776554 2345689999994  999999999999999999987643

>KOG0289|consensus

Probab=99.97  E-value=4e-29  Score=194.32  Aligned_cols=241  Identities=16%  Similarity=0.247  Sum_probs=206.1

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      ++||...|+.+.+  +...+++++.|..|++|.............|.++|+.+..+|.|+||++++.||...+.|++++.
T Consensus       257 ~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~  336 (506)
T KOG0289|consen  257 LKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGS  336 (506)
T ss_pred             ccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCc
Confidence            4599999999999  77889999999999999998888888888999999999999999999999999999999999998


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      .+........+-.+++.+|+|||.+|.+|..||.+++||+.++.....+     +.|.++|..++|+.+|.+++++. |+
T Consensus       337 ~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~F-----pght~~vk~i~FsENGY~Lat~add~  411 (506)
T KOG0289|consen  337 QLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKF-----PGHTGPVKAISFSENGYWLATAADDG  411 (506)
T ss_pred             EEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccC-----CCCCCceeEEEeccCceEEEEEecCC
Confidence            8877633223334899999999999999999999999999987754333     33467799999999999999997 78


Q ss_pred             eEEEEEecCCceeeEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcC--CCceeEEeeecccceEEEEEEecCCCc
Q psy7482         167 KAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLT--DGSHLWQIKASASRIKGLVFFSIPQET  241 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~~s~~~~  241 (327)
                      .|++||++..+..+++.  ...++.++.|.+. .+|+.++.+=.|++++-.  +...+..+..|.+..+.+.|.  ...+
T Consensus       412 ~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg--~~aq  489 (506)
T KOG0289|consen  412 SVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFG--EHAQ  489 (506)
T ss_pred             eEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeec--ccce
Confidence            89999999999888887  3346999999987 788888777677776633  456677888899889999994  7889


Q ss_pred             EEEEecCCCeEEEEEc
Q psy7482         242 TVCTGNEESAITAYNL  257 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~  257 (327)
                      ++++++.|..++++.+
T Consensus       490 ~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  490 YLASTSMDAILRLYAL  505 (506)
T ss_pred             EEeeccchhheEEeec
Confidence            9999999999888764

>KOG0308|consensus

Probab=99.97  E-value=4e-30  Score=209.21  Aligned_cols=244  Identities=16%  Similarity=0.271  Sum_probs=202.7

Q ss_pred             EEEEC-CCCCeEEEecCCCcEEEEEcCCCe------EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc
Q psy7482          59 CLKFT-PEGSHLISCSDDGSIAIFRVGSWQ------LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR  131 (327)
Q Consensus        59 ~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  131 (327)
                      .+..+ |.+++|++|+.||.|++|++....      ....+ ..|.+. |+.+....+++.|++++.|-+|++|+...+.
T Consensus        29 ~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asm-e~HsDW-VNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~  106 (735)
T KOG0308|consen   29 ALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASM-EHHSDW-VNDIILCGNGKTLISASSDTTVKVWNAHKDN  106 (735)
T ss_pred             hccccCCCCceEEecCCCceEEEeccccccCCcccchhhhh-hhhHhH-HhhHHhhcCCCceEEecCCceEEEeecccCc
Confidence            34444 367789999999999999985432      24455 677777 9999999899999999999999999988764


Q ss_pred             eeeeeeccccCccccceEEEEE-ccCCcEEEeec-CCeEEEEEecCCc--eeeEe----------cCCCceeEEEeecC-
Q psy7482         132 SAYITNLSSYGVGFENLDSVVW-SPEGLLYAIPI-QNKAVVFSVEKAG--VLQTL----------KSESKVHSVCFLNE-  196 (327)
Q Consensus       132 ~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~-~~~i~i~d~~~~~--~~~~~----------~~~~~i~~~~~~~~-  196 (327)
                      ..   -....+.|.+.|.|++. .++..++|+|+ |+.|.+||+.++.  .+..+          .+..+|++++..+. 
T Consensus       107 ~~---c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~  183 (735)
T KOG0308|consen  107 TF---CMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTG  183 (735)
T ss_pred             ch---hHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcc
Confidence            21   12233455677999999 77888888888 9999999999873  22222          24567999999888 


Q ss_pred             ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEE
Q psy7482         197 TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGL  276 (327)
Q Consensus       197 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  276 (327)
                      ..+++|+.++.+++||.++.+.+..+++|...|..+...  ++|..+++++.||+|++||+...+++.++..|...|+++
T Consensus       184 t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~--dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL  261 (735)
T KOG0308|consen  184 TIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVN--DDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWAL  261 (735)
T ss_pred             eEEEecCcccceEEeccccccceeeeeccccceEEEEEc--CCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEE
Confidence            578889999999999999999999999999999999995  899999999999999999999999999999999999999


Q ss_pred             eeeC--cEEEEEecCCcEEEEEccCccCCCceeeeec
Q psy7482         277 ASHR--NHLICITSAGDLVVWELNEDVTREPQRVSAT  311 (327)
Q Consensus       277 ~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~  311 (327)
                      ..+|  ..+++|+.||.|..=|+....  ....++..
T Consensus       262 ~~~~sf~~vYsG~rd~~i~~Tdl~n~~--~~tlick~  296 (735)
T KOG0308|consen  262 QSSPSFTHVYSGGRDGNIYRTDLRNPA--KSTLICKE  296 (735)
T ss_pred             eeCCCcceEEecCCCCcEEecccCCch--hheEeecC
Confidence            9999  999999999999999998852  34444433

>KOG2055|consensus

Probab=99.97  E-value=4.4e-29  Score=195.51  Aligned_cols=277  Identities=12%  Similarity=0.204  Sum_probs=229.6

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEccc--cccccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeE
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMVK--RKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      .+.|+++.|  ...+|++|+.||+++||.+..  ...++.+.-...+|.+.+|.|+|. .+++++....++.||+.+.+.
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~  292 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKV  292 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccccc
Confidence            478999999  778999999999999998763  345566666678999999999999 899999999999999988776


Q ss_pred             EEeEE-ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-cCC
Q psy7482          89 EKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-IQN  166 (327)
Q Consensus        89 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~  166 (327)
                      .+.-. .++....+.....++++++|+..+..|.|.+....+++.+..+++...      +..++|+.+++.|.++ ++|
T Consensus       293 ~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~------v~~~~fsSdsk~l~~~~~~G  366 (514)
T KOG2055|consen  293 TKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGV------VSDFTFSSDSKELLASGGTG  366 (514)
T ss_pred             ccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccE------EeeEEEecCCcEEEEEcCCc
Confidence            54321 333333478888999999999999999999999999999888888877      9999999999866555 599


Q ss_pred             eEEEEEecCCceeeEecCCCce--eEEEeecC-ceEEEeCCCCcEEEEEcCC------CceeEEeeecccceEEEEEEec
Q psy7482         167 KAVVFSVEKAGVLQTLKSESKV--HSVCFLNE-TTVCTGNEESAITAYNLTD------GSHLWQIKASASRIKGLVFFSI  237 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~~~~~i--~~~~~~~~-~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~v~~~~~~~s  237 (327)
                      .|.+||++...++..+...+.+  +++|.+++ .++++|+..|.|.|||.++      .+++..+..-...|+++.|+  
T Consensus       367 eV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn--  444 (514)
T KOG2055|consen  367 EVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFN--  444 (514)
T ss_pred             eEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeC--
Confidence            9999999999999999866555  55666677 8999999999999999654      35666666666789999995  


Q ss_pred             CCCcEEEEecC--CCeEEEEEcCCCceeEEeeccc---CceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         238 PQETTVCTGNE--ESAITAYNLTDGSHLWHIKASA---SRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       238 ~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~---~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      ++.+.||.+|.  +..+++-.+.+......+....   +.|+|++|+|  .++|.|.++|.|.+|.+.
T Consensus       445 ~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  445 HDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH  512 (514)
T ss_pred             cchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence            89999988875  5679998888777665555433   5789999999  999999999999999874

>KOG0639|consensus

Probab=99.97  E-value=7.8e-30  Score=202.01  Aligned_cols=278  Identities=15%  Similarity=0.215  Sum_probs=229.6

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc---cccccccc--ccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR---KQSGALMQ--HEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~---~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      .-.|..-|.++..  ..+.+.||+ .|.|+|||+...   .++..+..  ...-|.++...|||+.|++|+.-.++.|||
T Consensus       415 tL~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWD  493 (705)
T KOG0639|consen  415 TLAHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWD  493 (705)
T ss_pred             hhccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeee
Confidence            3468888888888  678899988 677999998643   23333332  456799999999999999999999999999


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      +......-.............++.+||.+..+++..||.|.|||+.+...+..+.     .|.+.+.|+..+++|..|.+
T Consensus       494 LAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrqfq-----GhtDGascIdis~dGtklWT  568 (705)
T KOG0639|consen  494 LAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQ-----GHTDGASCIDISKDGTKLWT  568 (705)
T ss_pred             ccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeeccc-----CCCCCceeEEecCCCceeec
Confidence            9765543332222323337889999999999999999999999999877655443     33455999999999999999


Q ss_pred             ec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482         163 PI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       163 ~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      |+ |++++.||++.++.+......+.|.++..+|+ ..+++|-+++.+.+.... +.....+..|+.-|.++.|.  +.|
T Consensus       569 GGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~s-kp~kyqlhlheScVLSlKFa--~cG  645 (705)
T KOG0639|consen  569 GGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTS-KPEKYQLHLHESCVLSLKFA--YCG  645 (705)
T ss_pred             CCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecC-CccceeecccccEEEEEEec--ccC
Confidence            88 99999999999999888888899999999998 899999999999988865 34456677799999999995  899


Q ss_pred             cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482         241 TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWEL  297 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~  297 (327)
                      +++++.+.|+.+..|...-|..+...+... +|.++..+.  ++|+||+.|....||.+
T Consensus       646 kwfvStGkDnlLnawrtPyGasiFqskE~S-sVlsCDIS~ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  646 KWFVSTGKDNLLNAWRTPYGASIFQSKESS-SVLSCDISFDDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             ceeeecCchhhhhhccCccccceeeccccC-cceeeeeccCceEEEecCCCcceEEEEE
Confidence            999999999999999999898888777544 788877776  99999999999888875

>KOG0268|consensus

Probab=99.97  E-value=1.6e-30  Score=197.70  Aligned_cols=261  Identities=18%  Similarity=0.290  Sum_probs=215.2

Q ss_pred             ccccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEE
Q psy7482          47 SGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW  125 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  125 (327)
                      +..+.+|.+.|.|++=+|.. ..+++|+.||.|++||+.+.++...+ ..|.+. |..+++..  ..+++++.|.+|+.|
T Consensus        59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f-~AH~G~-V~Gi~v~~--~~~~tvgdDKtvK~w  134 (433)
T KOG0268|consen   59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTF-KAHEGL-VRGICVTQ--TSFFTVGDDKTVKQW  134 (433)
T ss_pred             hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhhee-ecccCc-eeeEEecc--cceEEecCCcceeee
Confidence            45678999999999999976 68999999999999999999999999 999988 99999986  578999999999999


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC--ceEEEe
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE--TTVCTG  202 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~--~~l~~~  202 (327)
                      .++- .....+.....      +..+.-+..+..++++ ...|.|||.+-..++..+. ....|.++.|+|-  ..|+++
T Consensus       135 k~~~-~p~~tilg~s~------~~gIdh~~~~~~FaTc-Ge~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~  206 (433)
T KOG0268|consen  135 KIDG-PPLHTILGKSV------YLGIDHHRKNSVFATC-GEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASC  206 (433)
T ss_pred             eccC-Ccceeeecccc------cccccccccccccccc-CceeeecccccCCccceeecCCCceeEEecCCCcchheeee
Confidence            9864 33333333322      5566666556666665 4568999999999999998 6778999999996  788889


Q ss_pred             CCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-eeEEeecccCceEEEeeeC-
Q psy7482         203 NEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-HLWHIKASASRIKGLASHR-  280 (327)
Q Consensus       203 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~-  280 (327)
                      ..|+.|.+||++++.+++.+.. ....+.|+|+  |.+-.+.+|++|..++.||++..+ ++....+|...|.+++|+| 
T Consensus       207 ~sDrsIvLyD~R~~~Pl~KVi~-~mRTN~Iswn--PeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfspt  283 (433)
T KOG0268|consen  207 ASDRSIVLYDLRQASPLKKVIL-TMRTNTICWN--PEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPT  283 (433)
T ss_pred             ccCCceEEEecccCCccceeee-eccccceecC--ccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCC
Confidence            9999999999999999887653 3456789995  888889999999999999998765 7888899999999999999 


Q ss_pred             -cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         281 -NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       281 -~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                       +-+++||.|.+|+||.++.+..........+   ..|.|+.|+-|
T Consensus       284 G~EfvsgsyDksIRIf~~~~~~SRdiYhtkRM---q~V~~Vk~S~D  326 (433)
T KOG0268|consen  284 GQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRM---QHVFCVKYSMD  326 (433)
T ss_pred             cchhccccccceEEEeecCCCcchhhhhHhhh---heeeEEEEecc
Confidence             9999999999999999998842222222222   34889999865

>KOG1036|consensus

Probab=99.97  E-value=1.4e-28  Score=183.40  Aligned_cols=256  Identities=17%  Similarity=0.244  Sum_probs=203.7

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      ....|+++.|+|.+..|++++.||++++|++...+....+  .|..+ +.+++|.+ ...+++|+.||.|+.+|+.+++.
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~--~~~~p-lL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~   87 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF--KHGAP-LLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNE   87 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe--ecCCc-eeeeeccC-CceEEEeccCceEEEEEecCCcc
Confidence            3678999999999999999999999999999887665555  44444 99999987 45799999999999999998876


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEE
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAY  211 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~  211 (327)
                      ...-      .|..++.++.+.+....+++|+ |+.|++||.+.......+.....|.++.... +.|++|+.+..+.+|
T Consensus        88 ~~ig------th~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g-~~LvVg~~~r~v~iy  160 (323)
T KOG1036|consen   88 DQIG------THDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSG-NRLVVGTSDRKVLIY  160 (323)
T ss_pred             eeec------cCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEeccC-CEEEEeecCceEEEE
Confidence            4432      2344599999999777777777 9999999999877777777777888888754 588889999999999


Q ss_pred             EcCCCceeEEee--ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC----ceeEEeeccc---------CceEEE
Q psy7482         212 NLTDGSHLWQIK--ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG----SHLWHIKASA---------SRIKGL  276 (327)
Q Consensus       212 d~~~~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~---------~~v~~~  276 (327)
                      |+++.....+.+  .-+-.++++++.  |++.-.++++-||.|.+=.++..    ..-..++.|.         -+|+++
T Consensus       161 DLRn~~~~~q~reS~lkyqtR~v~~~--pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai  238 (323)
T KOG1036|consen  161 DLRNLDEPFQRRESSLKYQTRCVALV--PNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAI  238 (323)
T ss_pred             EcccccchhhhccccceeEEEEEEEe--cCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEecee
Confidence            999876544322  234578899997  78888899999999988776655    3456667664         279999


Q ss_pred             eeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         277 ASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       277 ~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +|+|  ..|+||+.||.|.+||+....  ....+...  ...|.+++|+.+
T Consensus       239 ~Fhp~~~tfaTgGsDG~V~~Wd~~~rK--rl~q~~~~--~~SI~slsfs~d  285 (323)
T KOG1036|consen  239 AFHPIHGTFATGGSDGIVNIWDLFNRK--RLKQLAKY--ETSISSLSFSMD  285 (323)
T ss_pred             EeccccceEEecCCCceEEEccCcchh--hhhhccCC--CCceEEEEeccC
Confidence            9999  999999999999999998872  44444333  345888888765

>KOG0650|consensus

Probab=99.97  E-value=2.7e-29  Score=202.73  Aligned_cols=282  Identities=14%  Similarity=0.233  Sum_probs=222.9

Q ss_pred             EEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCC--eEEEecCCCcEE
Q psy7482           4 LTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS--HLISCSDDGSIA   79 (327)
Q Consensus         4 ~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~   79 (327)
                      ....+.++||++.|.+++.  .|.+||+|+.||+|+||.+.++.++.++. ..+.|.|++|+|.+.  .||++-.+ .+.
T Consensus       390 t~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~-~~~  467 (733)
T KOG0650|consen  390 TRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGE-CVL  467 (733)
T ss_pred             ceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecC-ceE
Confidence            3455667799999999999  89999999999999999999999998887 456899999999655  34444333 233


Q ss_pred             EEE---------------------------------cCC---CeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---C
Q psy7482          80 IFR---------------------------------VGS---WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---K  120 (327)
Q Consensus        80 iw~---------------------------------~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g  120 (327)
                      |-+                                 -..   .+.--.+...|... |..+.|+..|.||++...+   .
T Consensus       468 ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~-i~~vtWHrkGDYlatV~~~~~~~  546 (733)
T KOG0650|consen  468 IVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKS-IRQVTWHRKGDYLATVMPDSGNK  546 (733)
T ss_pred             EeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCc-cceeeeecCCceEEEeccCCCcc
Confidence            333                                 211   11000121345555 9999999999999998653   5


Q ss_pred             CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ce
Q psy7482         121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TT  198 (327)
Q Consensus       121 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~  198 (327)
                      .|.|.++........+  ...   .+.+.++.|+|...+|++++...|++||+...+.++.+. ....|..++.+|. ..
T Consensus       547 ~VliHQLSK~~sQ~PF--~ks---kG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDn  621 (733)
T KOG0650|consen  547 SVLIHQLSKRKSQSPF--RKS---KGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDN  621 (733)
T ss_pred             eEEEEecccccccCch--hhc---CCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCe
Confidence            6889998766554332  211   233999999999999999999999999999888877776 6678999999997 78


Q ss_pred             EEEeCCCCcEEEEEcCCC-ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC-------CC--ceeEEeec
Q psy7482         199 VCTGNEESAITAYNLTDG-SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT-------DG--SHLWHIKA  268 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~-------~~--~~~~~~~~  268 (327)
                      ++.|+.|+.+..||+.-. ++.++++.|...+++++|+  +.-.++++|+.||.+.||.-.       +.  -++..+.+
T Consensus       622 li~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H--~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~g  699 (733)
T KOG0650|consen  622 LILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFH--KRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRG  699 (733)
T ss_pred             EEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhc--cccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccC
Confidence            999999999999999754 5678889999999999997  788999999999999998521       22  15678888


Q ss_pred             ccCc----eEEEeeeC--cEEEEEecCCcEEEE
Q psy7482         269 SASR----IKGLASHR--NHLICITSAGDLVVW  295 (327)
Q Consensus       269 ~~~~----v~~~~~~~--~~l~~~~~dg~v~iw  295 (327)
                      |...    |....|+|  .+|++++.||+|++|
T Consensus       700 H~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  700 HEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF  732 (733)
T ss_pred             ceeecccceEeecccCCCceEEecCCCceEEee
Confidence            8755    88899999  999999999999998

>KOG1273|consensus

Probab=99.97  E-value=2.3e-28  Score=183.03  Aligned_cols=278  Identities=15%  Similarity=0.215  Sum_probs=212.8

Q ss_pred             EEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      ..|+.|  .|.+||+|+.||.|.|||+.+...-+.+.+|..+|++++|+++|+.|++++.|..|.+||+..|.+.+.+  
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri--  103 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI--  103 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE--
Confidence            678888  8999999999999999999999999999999999999999999999999999999999999999988877  


Q ss_pred             cccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482          95 AHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS  172 (327)
Q Consensus        95 ~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d  172 (327)
                       ....||+...|+|.. +..++.-.+..-.+-++..+... .++............+..|.+.|+++.+|. .|.+.+||
T Consensus       104 -rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~-~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~  181 (405)
T KOG1273|consen  104 -RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS-VLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYD  181 (405)
T ss_pred             -EccCccceeeeccccCCeEEEEEecCCcEEEEecCCcee-eccCCCccccccccccccccCCCCEEEEecCcceEEEEe
Confidence             233349999999943 33443334444555565543322 122222111112234456899999999997 89999999


Q ss_pred             ecCCceeeEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC-------c--eeEEeee--cccceEEEEEEecC
Q psy7482         173 VEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG-------S--HLWQIKA--SASRIKGLVFFSIP  238 (327)
Q Consensus       173 ~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~-------~--~~~~~~~--~~~~v~~~~~~~s~  238 (327)
                      ..+.+++..++  ....|..+.++.. ..++..+.|..|+.|+++.-       +  +.++++.  ....=.+++|  |.
T Consensus       182 a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccf--s~  259 (405)
T KOG1273|consen  182 AETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCF--SG  259 (405)
T ss_pred             cchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheee--cC
Confidence            99999999888  3378999999887 78999999999999998631       1  1122211  1123346677  47


Q ss_pred             CCcEEEEecC-CCeEEEEEcCCCceeEEeeccc-CceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         239 QETTVCTGNE-ESAITAYNLTDGSHLWHIKASA-SRIKGLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       239 ~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +|.|+++++. ...++||.-..|.+++.+.+.. ....++.|+| +.++..-..|.++||.....
T Consensus       260 dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si~sg~v~iw~~~~~  324 (405)
T KOG1273|consen  260 DGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASIASGVVYIWAVVQV  324 (405)
T ss_pred             CccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeeccCCceEEEEeecc
Confidence            9999988774 4569999999999999999887 6788999999 44444447899999987665

>KOG0646|consensus

Probab=99.97  E-value=3.5e-29  Score=196.29  Aligned_cols=273  Identities=14%  Similarity=0.198  Sum_probs=218.5

Q ss_pred             CCCEEEEec-CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCce
Q psy7482          23 TSKLAASSG-ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV  101 (327)
Q Consensus        23 ~~~~l~~~~-~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v  101 (327)
                      .+.+++++. ....+.+|.+..........--.++|.+++-+|+|.+|+.|+..|.|++|.+.+|.++..+ .+|-.. |
T Consensus        49 ~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~-~aHYQ~-I  126 (476)
T KOG0646|consen   49 NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVL-SAHYQS-I  126 (476)
T ss_pred             chhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHH-Hhhccc-e
Confidence            344666554 3457899998776666544456788999999999999999989999999999999999999 889888 9


Q ss_pred             eeEEEecCCCEEEEEeCCCCEEEEEcCCCc----eeeeeeccccCccccceEEEEEccCC--cEEEeec-CCeEEEEEec
Q psy7482         102 NHISIHPSGKLALSVGKDKTLRTWNLVKGR----SAYITNLSSYGVGFENLDSVVWSPEG--LLYAIPI-QNKAVVFSVE  174 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~-~~~i~i~d~~  174 (327)
                      +++.|+.||.+|++|+.||.|.+|++..--    .....++.....|.-+|+++...+.+  ..+++++ |.++++||+.
T Consensus       127 TcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS  206 (476)
T KOG0646|consen  127 TCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLS  206 (476)
T ss_pred             eEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEec
Confidence            999999999999999999999999874311    00122233345566779999887653  4555555 9999999999


Q ss_pred             CCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc----------------eeEEeeeccc--ceEEEEEE
Q psy7482         175 KAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS----------------HLWQIKASAS--RIKGLVFF  235 (327)
Q Consensus       175 ~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~----------------~~~~~~~~~~--~v~~~~~~  235 (327)
                      .+..+.++..+..+.+++.+|. ..+.+|+.+|.|.+.++....                .+..+.+|.+  +|++++++
T Consensus       207 ~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais  286 (476)
T KOG0646|consen  207 LGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAIS  286 (476)
T ss_pred             cceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEe
Confidence            9999999999999999999997 889999999999998875432                3455678888  99999995


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccC
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~  299 (327)
                        .||.+|++|+.||.++|||+.+.++++++....++|+.+.+.|   ..+..-...-.+-.|++..
T Consensus       287 --~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~lkr  351 (476)
T KOG0646|consen  287 --TDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLERGIILFEHKQPSLPNPHLKR  351 (476)
T ss_pred             --cCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeeccccceecccccCccCCchHhhc
Confidence              8999999999999999999999999999987888999999977   3333223333455555544

>KOG2048|consensus

Probab=99.97  E-value=1.1e-27  Score=196.01  Aligned_cols=279  Identities=19%  Similarity=0.264  Sum_probs=231.5

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEcccccc-cccccc-ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ-SGALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      -...|.+||+  +.+.||.+-.||.|.+|++..+-. ...+.+ .+..|.+++|++ +..|++.+.+|.|.-||+.+++.
T Consensus        24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~  102 (691)
T KOG2048|consen   24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQ  102 (691)
T ss_pred             eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCce
Confidence            3578999999  777899999999999999987532 233444 346799999994 56788999999999999999998


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCe
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNK  167 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~  167 (327)
                      ...+ ....+. |++++.+|.+..++.|+.||.+..++...++......+...   ++.+.+++|+|++..+++|+ ||.
T Consensus       103 ~~~~-d~~gg~-IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq---~sRvLslsw~~~~~~i~~Gs~Dg~  177 (691)
T KOG2048|consen  103 KYNI-DSNGGA-IWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQ---KSRVLSLSWNPTGTKIAGGSIDGV  177 (691)
T ss_pred             eEEe-cCCCcc-eeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccc---cceEEEEEecCCccEEEecccCce
Confidence            8887 555555 99999999999999999999888888887776665555444   45699999999999888887 999


Q ss_pred             EEEEEecCCceeeEec---------CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecC
Q psy7482         168 AVVFSVEKAGVLQTLK---------SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIP  238 (327)
Q Consensus       168 i~i~d~~~~~~~~~~~---------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~  238 (327)
                      |++||..++..+....         ...-|.++.+..++.+++|...|+|.+||...+..++.+..|...|.+++..  +
T Consensus       178 Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~--~  255 (691)
T KOG2048|consen  178 IRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVA--D  255 (691)
T ss_pred             EEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEc--C
Confidence            9999999988776221         1223667777788999999999999999999999999999999999999994  7


Q ss_pred             CCcEEEEecCCCeEEEEEcCCCce----eEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccC
Q psy7482         239 QETTVCTGNEESAITAYNLTDGSH----LWHIKASASRIKGLASHRNHLICITSAGDLVVWELNE  299 (327)
Q Consensus       239 ~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~  299 (327)
                      ++.++++++.|+.|..|...+.+.    ......|...|++++..+..+++|+.|..+.+=....
T Consensus       256 ~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~~l~sgG~d~~l~i~~s~~  320 (691)
T KOG2048|consen  256 NEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIENALISGGRDFTLAICSSRE  320 (691)
T ss_pred             CCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecceEEecceeeEEEEccccc
Confidence            889999999999999998776643    2344568889999999999999999999887765544

>KOG2106|consensus

Probab=99.97  E-value=1.5e-27  Score=189.12  Aligned_cols=297  Identities=15%  Similarity=0.260  Sum_probs=227.4

Q ss_pred             CccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE---
Q psy7482          14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE---   89 (327)
Q Consensus        14 ~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~---   89 (327)
                      ...|.|++| .+.-++||.++|.|.||+..+.+..+....|.+.|.+++...+|.+| +|+.|+.|..||-. -+.+   
T Consensus       246 kk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~Gtll-SGgKDRki~~Wd~~-y~k~r~~  323 (626)
T KOG2106|consen  246 KKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLL-SGGKDRKIILWDDN-YRKLRET  323 (626)
T ss_pred             ceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEe-ecCccceEEecccc-ccccccc
Confidence            378999999 66778899999999999998887777777999999999999998655 59999999999831 0000   


Q ss_pred             ---------E----------------------------eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          90 ---------K----------------------------LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        90 ---------~----------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                               +                            ....+|.+. ...++.+|+.+.+++++.|+.+++|+  ..+.
T Consensus       324 elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~de-lwgla~hps~~q~~T~gqdk~v~lW~--~~k~  400 (626)
T KOG2106|consen  324 ELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDE-LWGLATHPSKNQLLTCGQDKHVRLWN--DHKL  400 (626)
T ss_pred             cCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccc-eeeEEcCCChhheeeccCcceEEEcc--CCce
Confidence                     0                            001456665 88899999999999999999999999  4555


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEE
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITA  210 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i  210 (327)
                      .........      ..|+.|+|.| .+++|. .|...+.|.++...+.......+++++.|+|+ .+++.|+.|+.|++
T Consensus       401 ~wt~~~~d~------~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyi  473 (626)
T KOG2106|consen  401 EWTKIIEDP------AECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYI  473 (626)
T ss_pred             eEEEEecCc------eeEeeccCcc-eEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEE
Confidence            555545444      8999999999 888887 99999999999777766667899999999999 89999999999999


Q ss_pred             EEcCCCce-eEEe-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee------------------ccc
Q psy7482         211 YNLTDGSH-LWQI-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK------------------ASA  270 (327)
Q Consensus       211 ~d~~~~~~-~~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------------------~~~  270 (327)
                      |.+..... .... +.+..+|+.+.|+  +|++++.+-+-|-.|..|.....+.+...+                  .+.
T Consensus       474 y~Vs~~g~~y~r~~k~~gs~ithLDwS--~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~  551 (626)
T KOG2106|consen  474 YRVSANGRKYSRVGKCSGSPITHLDWS--SDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDG  551 (626)
T ss_pred             EEECCCCcEEEEeeeecCceeEEeeec--CCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCC
Confidence            99876543 2222 3345899999994  999999999999999999543322211111                  233


Q ss_pred             CceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         271 SRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       271 ~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ..|..++-+.  +++++|.+.|+|++|..+-..... .......|++-|++++|.-+
T Consensus       552 t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA-~~he~~ghs~~vt~V~Fl~~  607 (626)
T KOG2106|consen  552 TDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRA-PSHEYGGHSSHVTNVAFLCK  607 (626)
T ss_pred             chHHHhhhhhhhhhhhccccCceEEEEccccCCCcc-cceeeccccceeEEEEEeeC
Confidence            3445555554  899999999999999987762111 12223457788999999643

>KOG2096|consensus

Probab=99.97  E-value=8.9e-28  Score=180.16  Aligned_cols=281  Identities=16%  Similarity=0.205  Sum_probs=204.5

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccc--cccc--cccccEEEEEECCCCCeEEE-ecCCCcEEEE
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS--GALM--QHEGTITCLKFTPEGSHLIS-CSDDGSIAIF   81 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~-~~~d~~i~iw   81 (327)
                      .++||.+.|++++|  ||++|||++.|++|++|++.+.+..  +.+.  -.-+..+.++|.||.+-++. .-...++++|
T Consensus        81 ~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vy  160 (420)
T KOG2096|consen   81 VLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVY  160 (420)
T ss_pred             hhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEE
Confidence            45799999999999  9999999999999999999864321  1111  11234688999999876554 4445679999


Q ss_pred             EcCC---CeEE--------EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEE
Q psy7482          82 RVGS---WQLE--------KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDS  150 (327)
Q Consensus        82 ~~~~---~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~  150 (327)
                      .+..   |...        ..+...|.-. +..+-...++.+|++++.|..|.+|+++ |+.+..+......     -..
T Consensus       161 k~~K~~dG~~~~~~v~~D~~~f~~kh~v~-~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~-----n~~  233 (420)
T KOG2096|consen  161 KLVKKTDGSGSHHFVHIDNLEFERKHQVD-IINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSS-----NYD  233 (420)
T ss_pred             EeeecccCCCCcccccccccccchhcccc-eEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccccc-----ccc
Confidence            7642   2111        1122333433 6667777788999999999999999998 8777666554432     557


Q ss_pred             EEEccCCcEEEeec-CCeEEEEEec---CCc-----eeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC---
Q psy7482         151 VVWSPEGLLYAIPI-QNKAVVFSVE---KAG-----VLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG---  216 (327)
Q Consensus       151 ~~~~~~~~~l~~~~-~~~i~i~d~~---~~~-----~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~---  216 (327)
                      .+.+|+|++++++. .-.+++|.+-   .|.     ....++ |.+.|..++|+|+ ..+++.+.||++++||+.-.   
T Consensus       234 aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~  313 (420)
T KOG2096|consen  234 AAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEA  313 (420)
T ss_pred             eeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEec
Confidence            78999999999987 8889999863   222     233444 8899999999999 89999999999999997531   


Q ss_pred             ----ceeEEe----eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee-cccCceEEEeeeC--cEEEE
Q psy7482         217 ----SHLWQI----KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK-ASASRIKGLASHR--NHLIC  285 (327)
Q Consensus       217 ----~~~~~~----~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~l~~  285 (327)
                          +.+++.    ....+....++.  +|+|+.|+.+. ...+++|..++++..-.++ .|...|.+++|++  +++++
T Consensus       314 ~qDpk~Lk~g~~pl~aag~~p~RL~l--sP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~at  390 (420)
T KOG2096|consen  314 GQDPKILKEGSAPLHAAGSEPVRLEL--SPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIAT  390 (420)
T ss_pred             CCCchHhhcCCcchhhcCCCceEEEe--CCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEee
Confidence                222222    111222336677  49999988765 4679999999988666554 6889999999999  78887


Q ss_pred             EecCCcEEEEEccCc
Q psy7482         286 ITSAGDLVVWELNED  300 (327)
Q Consensus       286 ~~~dg~v~iw~~~~~  300 (327)
                      ++ |..+++..-..+
T Consensus       391 cG-dr~vrv~~ntpg  404 (420)
T KOG2096|consen  391 CG-DRYVRVIRNTPG  404 (420)
T ss_pred             ec-ceeeeeecCCCc
Confidence            76 778888874443

>KOG0772|consensus

Probab=99.97  E-value=1.6e-28  Score=194.98  Aligned_cols=271  Identities=12%  Similarity=0.142  Sum_probs=202.0

Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC----eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEE
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW----QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR  123 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  123 (327)
                      ..+++|+..|.++++.|.|..|++|+.|..|++||+...    +..+.+...... .|+++.|++.+..|++.+.....+
T Consensus       161 i~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h-~i~sl~ys~Tg~~iLvvsg~aqak  239 (641)
T KOG0772|consen  161 IQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETH-QINSLQYSVTGDQILVVSGSAQAK  239 (641)
T ss_pred             EeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCccccc-ccceeeecCCCCeEEEEecCccee
Confidence            356788999999999999999999999999999998643    223333222333 399999999999998888889999


Q ss_pred             EEEcCCCceeeee-------eccccCccccceEEEEEccCCc--EEEeecCCeEEEEEecCCc-eeeEec------CCCc
Q psy7482         124 TWNLVKGRSAYIT-------NLSSYGVGFENLDSVVWSPEGL--LYAIPIQNKAVVFSVEKAG-VLQTLK------SESK  187 (327)
Q Consensus       124 iwd~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~i~i~d~~~~~-~~~~~~------~~~~  187 (327)
                      ++|-...+.....       .+.....|...+++.+|+|..+  +|.++.||++++||+...+ ....++      ..-+
T Consensus       240 l~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~  319 (641)
T KOG0772|consen  240 LLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVP  319 (641)
T ss_pred             EEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccC
Confidence            9996543333222       2233356777899999999763  4444459999999997654 333443      2347


Q ss_pred             eeEEEeecC-ceEEEeCCCCcEEEEEcCCCce---eEEeeeccc--ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         188 VHSVCFLNE-TTVCTGNEESAITAYNLTDGSH---LWQIKASAS--RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       188 i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~--~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      ++.++|+++ ..+++|+.||.|.+|+......   ...-++|..  .|+++.|  |++|++|++-+.|+++++||+++.+
T Consensus       320 ~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~F--S~dg~~LlSRg~D~tLKvWDLrq~k  397 (641)
T KOG0772|consen  320 VTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISF--SYDGNYLLSRGFDDTLKVWDLRQFK  397 (641)
T ss_pred             ceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEe--ccccchhhhccCCCceeeeeccccc
Confidence            899999999 7899999999999999754322   222356776  8999999  4999999999999999999999765


Q ss_pred             -eeEEeeccc--CceEEEeeeC--cEEEEEec------CCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         262 -HLWHIKASA--SRIKGLASHR--NHLICITS------AGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       262 -~~~~~~~~~--~~v~~~~~~~--~~l~~~~~------dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                       ++....+-.  -+-+.++|+|  ++|++|+.      .|++.+||..+-.  ..+.+.  .....|..+.|||.
T Consensus       398 kpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d--~v~ki~--i~~aSvv~~~Whpk  468 (641)
T KOG0772|consen  398 KPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLD--TVYKID--ISTASVVRCLWHPK  468 (641)
T ss_pred             cchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEecccee--eEEEec--CCCceEEEEeecch
Confidence             555444332  3567899999  78888864      4679999987763  333332  23667889999984

>KOG1332|consensus

Probab=99.97  E-value=4e-29  Score=180.56  Aligned_cols=242  Identities=16%  Similarity=0.248  Sum_probs=191.2

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc---ccccccccccccEEEEEECC--CCCeEEEecCCCcEEEEEc
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~---~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~   83 (327)
                      .+|.+.|..+..  .|+.|||+++|++|+|+...++   +++.++.+|.++|..++|..  .|.+||+++.||.|.||.-
T Consensus         8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke   87 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE   87 (299)
T ss_pred             hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence            368888888776  8999999999999999998765   46778999999999999976  7999999999999999998


Q ss_pred             CCCeEEEeEE-ecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccC---
Q psy7482          84 GSWQLEKLFK-KAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPE---  156 (327)
Q Consensus        84 ~~~~~~~~~~-~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~---  156 (327)
                      ++++-.+... ..|... |++++|.|.  |-.|++++.||.|.+.+.+.. .....   .....|.-.+++++|.|.   
T Consensus        88 ~~g~w~k~~e~~~h~~S-VNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~---ki~~aH~~GvnsVswapa~~~  163 (299)
T KOG1332|consen   88 ENGRWTKAYEHAAHSAS-VNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTS---KIVFAHEIGVNSVSWAPASAP  163 (299)
T ss_pred             CCCchhhhhhhhhhccc-ceeecccccccceEEEEeeCCCcEEEEEEcCCCCccch---hhhhccccccceeeecCcCCC
Confidence            8875433321 567777 999999994  678999999999999998765 21111   111223444999999985   


Q ss_pred             C-----------cEEEeec-CCeEEEEEecCCc--eeeEec-CCCceeEEEeecC-----ceEEEeCCCCcEEEEEcCCC
Q psy7482         157 G-----------LLYAIPI-QNKAVVFSVEKAG--VLQTLK-SESKVHSVCFLNE-----TTVCTGNEESAITAYNLTDG  216 (327)
Q Consensus       157 ~-----------~~l~~~~-~~~i~i~d~~~~~--~~~~~~-~~~~i~~~~~~~~-----~~l~~~~~d~~i~i~d~~~~  216 (327)
                      |           +.|++|+ |+.|+||+..+++  ....+. |...++.++|.|.     ..++++++||++.||..+..
T Consensus       164 g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e  243 (299)
T KOG1332|consen  164 GSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEE  243 (299)
T ss_pred             ccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCc
Confidence            3           4577776 9999999998763  223355 8999999999996     47999999999999987632


Q ss_pred             ce---eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         217 SH---LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       217 ~~---~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                      ..   ...++.....+..+.|+  ..|..|+.++.|+.+.+|.-.
T Consensus       244 ~e~wk~tll~~f~~~~w~vSWS--~sGn~LaVs~GdNkvtlwke~  286 (299)
T KOG1332|consen  244 YEPWKKTLLEEFPDVVWRVSWS--LSGNILAVSGGDNKVTLWKEN  286 (299)
T ss_pred             cCcccccccccCCcceEEEEEe--ccccEEEEecCCcEEEEEEeC
Confidence            11   22234456789999995  899999999999999999743

>KOG2106|consensus

Probab=99.97  E-value=9.4e-27  Score=184.60  Aligned_cols=309  Identities=14%  Similarity=0.212  Sum_probs=228.0

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCC--------eEEEEEccccccccccccccccEEEEEECC--CCCeEEEe--cCC
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADE--------TVVLYDMVKRKQSGALMQHEGTITCLKFTP--EGSHLISC--SDD   75 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg--------~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~--~~d   75 (327)
                      ..||...|.||+.  +.-.+++|-.-|        .|++||..+...++.+......|.|++|++  .|.+|+.-  +.+
T Consensus       100 y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~  179 (626)
T KOG2106|consen  100 YLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNP  179 (626)
T ss_pred             ccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEecCCCc
Confidence            3589999999999  444566554434        499999888877777777778899999998  34555543  345


Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS  154 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  154 (327)
                      ..+.+||...+...... ....+. |....|+|.+ +++++++ .|.+.+|+.+.+........-..... ..|.|++|.
T Consensus       180 h~lSVWdWqk~~~~~~v-k~sne~-v~~a~FHPtd~nliit~G-k~H~~Fw~~~~~~l~k~~~~fek~ek-k~Vl~v~F~  255 (626)
T KOG2106|consen  180 HMLSVWDWQKKAKLGPV-KTSNEV-VFLATFHPTDPNLIITCG-KGHLYFWTLRGGSLVKRQGIFEKREK-KFVLCVTFL  255 (626)
T ss_pred             cccchhhchhhhccCcc-eeccce-EEEEEeccCCCcEEEEeC-CceEEEEEccCCceEEEeeccccccc-eEEEEEEEc
Confidence            67899999887777666 445555 8999999955 4555555 58999999998876655443333222 559999999


Q ss_pred             cCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCc----------------
Q psy7482         155 PEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGS----------------  217 (327)
Q Consensus       155 ~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----------------  217 (327)
                      ++|..+..-++|.|.||+..+.+..+... |++.|.+++...++.|++|+.|..|..||-.-.+                
T Consensus       256 engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv  335 (626)
T KOG2106|consen  256 ENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTV  335 (626)
T ss_pred             CCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEeccccccccccccCchhcCCeeEE
Confidence            99998877789999999998877666555 9999999999999999999999999999832110                


Q ss_pred             ------------------------eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC-------------
Q psy7482         218 ------------------------HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG-------------  260 (327)
Q Consensus       218 ------------------------~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~-------------  260 (327)
                                              ......+|......++.+  |+...+++++.|+.+++|+-...             
T Consensus       336 ~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~h--ps~~q~~T~gqdk~v~lW~~~k~~wt~~~~d~~~~~  413 (626)
T KOG2106|consen  336 AEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATH--PSKNQLLTCGQDKHVRLWNDHKLEWTKIIEDPAECA  413 (626)
T ss_pred             ecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcC--CChhheeeccCcceEEEccCCceeEEEEecCceeEe
Confidence                                    001124566666777775  78888999999999999972110             


Q ss_pred             ------------------------ceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCC
Q psy7482         261 ------------------------SHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDG  314 (327)
Q Consensus       261 ------------------------~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~  314 (327)
                                              +.+.++...+++++.+.|+|  .+||.|+.|+.|++|.+....  ........-++
T Consensus       414 ~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g--~~y~r~~k~~g  491 (626)
T KOG2106|consen  414 DFHPSGVVAVGTATGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANG--RKYSRVGKCSG  491 (626)
T ss_pred             eccCcceEEEeeccceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCC--cEEEEeeeecC
Confidence                                    00111112256899999999  999999999999999998874  22222223355


Q ss_pred             CceEEEEeCCCC
Q psy7482         315 CRFTCLAIRPPV  326 (327)
Q Consensus       315 ~~i~~l~~~p~~  326 (327)
                      ++|+.|.|++|.
T Consensus       492 s~ithLDwS~Ds  503 (626)
T KOG2106|consen  492 SPITHLDWSSDS  503 (626)
T ss_pred             ceeEEeeecCCC
Confidence            899999999974

>KOG0646|consensus

Probab=99.97  E-value=3.3e-28  Score=190.87  Aligned_cols=280  Identities=18%  Similarity=0.231  Sum_probs=216.3

Q ss_pred             EecCC-CeEEEEEccccccccccccc-cccEEEEEECCCCCeEEEecC-CCcEEEEEcCCCeEEEeEEecccCCceeeEE
Q psy7482          29 SSGAD-ETVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQLEKLFKKAHKGTAVNHIS  105 (327)
Q Consensus        29 ~~~~d-g~v~~w~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~  105 (327)
                      +++.| .++.+||+.+|....++++. ...-.++..- ++++++++.. ...+.+|.+......... ..-.+. |.+++
T Consensus        12 ssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~-~v~Pg~-v~al~   88 (476)
T KOG0646|consen   12 SSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQY-IVLPGP-VHALA   88 (476)
T ss_pred             ccCCCCcceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhh-cccccc-eeeee
Confidence            34444 45999999999988888764 2222222221 2456666654 457899998755444422 233444 99999


Q ss_pred             EecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecC---------
Q psy7482         106 IHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEK---------  175 (327)
Q Consensus       106 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~---------  175 (327)
                      -+|+|.+|+.|+..|.|++|.+.+|..+..+.     .|...|+++.|+.|+.++++|+ ||.|.+|++..         
T Consensus        89 s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~-----aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~  163 (476)
T KOG0646|consen   89 SSNLGYFLLAGTISGNLYLWELSSGILLNVLS-----AHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHS  163 (476)
T ss_pred             cCCCceEEEeecccCcEEEEEeccccHHHHHH-----hhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCC
Confidence            99999999998899999999999999866552     3355699999999999999998 99999998742         


Q ss_pred             CceeeEec-CCCceeEEEeecC---ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCe
Q psy7482         176 AGVLQTLK-SESKVHSVCFLNE---TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESA  251 (327)
Q Consensus       176 ~~~~~~~~-~~~~i~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~  251 (327)
                      -+++..+. |.-+|+++...+.   .++++++.|.++++||+..+..+.++. ....+.+++.  +|.++.+.+|+.+|.
T Consensus       164 ~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~l--Dpae~~~yiGt~~G~  240 (476)
T KOG0646|consen  164 VKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVAL--DPAERVVYIGTEEGK  240 (476)
T ss_pred             ccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEe-cCCcceeEEE--cccccEEEecCCcce
Confidence            34566666 7889999998764   789999999999999999998888775 4456899999  599999999999999


Q ss_pred             EEEEEcCC----------------CceeEEeecccC--ceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeec
Q psy7482         252 ITAYNLTD----------------GSHLWHIKASAS--RIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSAT  311 (327)
Q Consensus       252 i~i~d~~~----------------~~~~~~~~~~~~--~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~  311 (327)
                      |.+.++..                +..+..+.+|.+  +|++++.+-  .+|++|+.||.|+|||+...     +.++..
T Consensus       241 I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~-----Q~iRtl  315 (476)
T KOG0646|consen  241 IFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSK-----QCIRTL  315 (476)
T ss_pred             EEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchH-----HHHHHH
Confidence            99987643                224566778887  999999887  99999999999999999988     334333


Q ss_pred             C-CCCceEEEEeCC
Q psy7482         312 N-DGCRFTCLAIRP  324 (327)
Q Consensus       312 ~-~~~~i~~l~~~p  324 (327)
                      . ..++|+.+.+.|
T Consensus       316 ~~~kgpVtnL~i~~  329 (476)
T KOG0646|consen  316 QTSKGPVTNLQINP  329 (476)
T ss_pred             hhhccccceeEeec
Confidence            3 556788888744

>KOG1539|consensus

Probab=99.97  E-value=1.4e-27  Score=199.72  Aligned_cols=283  Identities=14%  Similarity=0.205  Sum_probs=233.9

Q ss_pred             C-CccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccc-cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          13 H-TASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        13 h-~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      | .+.|++++|  ||+ .+|+|+..|.+.+||++..+.+..+. .|.+.|....|.|....+++++.|..+++|=.+++.
T Consensus       242 ~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~d  321 (910)
T KOG1539|consen  242 QDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGD  321 (910)
T ss_pred             ccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCC
Confidence            5 599999999  666 56777788999999999888877766 688999999999998999999999888888433111


Q ss_pred             E-----------------EEeEE---------------------------------------------------------
Q psy7482          88 L-----------------EKLFK---------------------------------------------------------   93 (327)
Q Consensus        88 ~-----------------~~~~~---------------------------------------------------------   93 (327)
                      -                 ++.+.                                                         
T Consensus       322 g~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~f  401 (910)
T KOG1539|consen  322 GVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEF  401 (910)
T ss_pred             CcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceee
Confidence            0                 00000                                                         


Q ss_pred             -------------------------------------eccc-----CCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc
Q psy7482          94 -------------------------------------KAHK-----GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR  131 (327)
Q Consensus        94 -------------------------------------~~~~-----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  131 (327)
                                                           ..+.     ...+++++.++-|++.+.|...|.|-+|++++|-
T Consensus       402 a~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi  481 (910)
T KOG1539|consen  402 AFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGI  481 (910)
T ss_pred             ecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCe
Confidence                                                 0111     1227788888889999999999999999999886


Q ss_pred             eeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEE
Q psy7482         132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAIT  209 (327)
Q Consensus       132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~  209 (327)
                      ....+.  ....|..+|..++...-++.+++++ +|.+.+||..+...+..+.....+.++..+.. +.++++..|-.|+
T Consensus       482 ~r~sf~--~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~  559 (910)
T KOG1539|consen  482 HRKSFG--DSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIR  559 (910)
T ss_pred             eecccc--cCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEE
Confidence            654442  2345567799999998888887776 99999999999999999998889999999887 8899999999999


Q ss_pred             EEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEe
Q psy7482         210 AYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICIT  287 (327)
Q Consensus       210 i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~  287 (327)
                      ++|..+.+.++.+.+|.+.|++++|  ||||++|++++.|++|++||+.++.++-.+.- ..+..++.|+|  ++||++.
T Consensus       560 vvD~~t~kvvR~f~gh~nritd~~F--S~DgrWlisasmD~tIr~wDlpt~~lID~~~v-d~~~~sls~SPngD~LAT~H  636 (910)
T KOG1539|consen  560 VVDVVTRKVVREFWGHGNRITDMTF--SPDGRWLISASMDSTIRTWDLPTGTLIDGLLV-DSPCTSLSFSPNGDFLATVH  636 (910)
T ss_pred             EEEchhhhhhHHhhccccceeeeEe--CCCCcEEEEeecCCcEEEEeccCcceeeeEec-CCcceeeEECCCCCEEEEEE
Confidence            9999999999999999999999999  59999999999999999999999998877764 44889999999  9999999


Q ss_pred             cCC-cEEEEEccCc
Q psy7482         288 SAG-DLVVWELNED  300 (327)
Q Consensus       288 ~dg-~v~iw~~~~~  300 (327)
                      .|+ -|++|.-...
T Consensus       637 vd~~gIylWsNksl  650 (910)
T KOG1539|consen  637 VDQNGIYLWSNKSL  650 (910)
T ss_pred             ecCceEEEEEchhH
Confidence            994 5999975543

>KOG2445|consensus

Probab=99.97  E-value=2e-27  Score=177.28  Aligned_cols=243  Identities=14%  Similarity=0.276  Sum_probs=187.9

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc----ccccccccccccEEEEEECC--CCCeEEEecCCCcEEEEE
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFR   82 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~   82 (327)
                      .+|.+-|.++.|  .|+.+|+|+.|++|+|||..+.    .+....+.|.+.|..+.|.+  -|+.+|+++.|+++.||.
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            379999999999  8999999999999999996543    34456678999999999976  589999999999999997


Q ss_pred             cCC---------CeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCCCceeeeeecc--------ccCc
Q psy7482          83 VGS---------WQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSAYITNLS--------SYGV  143 (327)
Q Consensus        83 ~~~---------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------~~~~  143 (327)
                      -..         .....++ ...... |+.+.|.|  -|-.|++++.||.++||+.-....+....+.        ....
T Consensus        90 E~~~~~~~~~~~Wv~~ttl-~Dsrss-V~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~  167 (361)
T KOG2445|consen   90 EQEKSEEAHGRRWVRRTTL-VDSRSS-VTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGK  167 (361)
T ss_pred             ecccccccccceeEEEEEe-ecCCcc-eeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccc
Confidence            521         1223334 444455 99999999  4678999999999999987653322221111        1223


Q ss_pred             cccceEEEEEccC---CcEEEeecCC------eEEEEEecCCc----eeeEec-CCCceeEEEeecC-----ceEEEeCC
Q psy7482         144 GFENLDSVVWSPE---GLLYAIPIQN------KAVVFSVEKAG----VLQTLK-SESKVHSVCFLNE-----TTVCTGNE  204 (327)
Q Consensus       144 ~~~~v~~~~~~~~---~~~l~~~~~~------~i~i~d~~~~~----~~~~~~-~~~~i~~~~~~~~-----~~l~~~~~  204 (327)
                      +..+..|+.|+|.   ..+|++|++.      .++||....+.    .+..+. +..+|++++|.|+     ..+++++.
T Consensus       168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k  247 (361)
T KOG2445|consen  168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK  247 (361)
T ss_pred             ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence            4556889999984   4689999865      88999876543    233333 8899999999997     36899999


Q ss_pred             CCcEEEEEcCCC--------------------ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         205 ESAITAYNLTDG--------------------SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       205 d~~i~i~d~~~~--------------------~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                      || |+||.++..                    +.+..+..|.+.|..+.|.  -.|..|++.+.||.+++|...
T Consensus       248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wN--mtGtiLsStGdDG~VRLWkan  318 (361)
T KOG2445|consen  248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWN--MTGTILSSTGDDGCVRLWKAN  318 (361)
T ss_pred             Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEe--eeeeEEeecCCCceeeehhhh
Confidence            99 999998731                    2345567899999999996  789999999999999999753

>KOG0321|consensus

Probab=99.97  E-value=3.5e-28  Score=197.62  Aligned_cols=277  Identities=14%  Similarity=0.156  Sum_probs=206.5

Q ss_pred             CCCEEEEecCCCeEEEEEcccccc------ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe--EEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQ------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL--FKK   94 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~--~~~   94 (327)
                      ...+||.+.+||.|.++|......      +.....|...|..+.|.|....|++++.|.++++||+++.++...  + .
T Consensus        63 ~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~-~  141 (720)
T KOG0321|consen   63 KEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLN-L  141 (720)
T ss_pred             ccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceee-c
Confidence            567899999999999999765432      244567999999999999777899999999999999999888776  6 8


Q ss_pred             cccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceee----------------------eeeccccCccccceEE-
Q psy7482          95 AHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAY----------------------ITNLSSYGVGFENLDS-  150 (327)
Q Consensus        95 ~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~----------------------~~~~~~~~~~~~~v~~-  150 (327)
                      +|... |.+++|.| +...|++|+.||.|.|||++......                      .........+...+.+ 
T Consensus       142 GH~~S-vkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ss  220 (720)
T KOG0321|consen  142 GHTGS-VKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSS  220 (720)
T ss_pred             ccccc-cchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeee
Confidence            99998 99999999 56789999999999999997432000                      0000000111122333 


Q ss_pred             --EEEccCCcEEEeec--CCeEEEEEecCCceeeEec---------C---CCceeEEEeecC-ceEEEeCCCCcEEEEEc
Q psy7482         151 --VVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLK---------S---ESKVHSVCFLNE-TTVCTGNEESAITAYNL  213 (327)
Q Consensus       151 --~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~---------~---~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~  213 (327)
                        +.+..|...|++++  |+.|++||++.........         +   ...+.++..... .+|++.+.|+.|+.||+
T Consensus       221 vTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm  300 (720)
T KOG0321|consen  221 VTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNM  300 (720)
T ss_pred             eEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEec
Confidence              44555666777665  9999999999865443322         1   234566666554 67777788999999999


Q ss_pred             CCCc--eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-eeEEeecccCceEEEeeeC---cEEEEEe
Q psy7482         214 TDGS--HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-HLWHIKASASRIKGLASHR---NHLICIT  287 (327)
Q Consensus       214 ~~~~--~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~---~~l~~~~  287 (327)
                      ....  ++..+.++...-..+.-..+|++.++++|+.|...++|.+.+.+ ....+.+|.-.|++++|.|   .-+++++
T Consensus       301 ~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcS  380 (720)
T KOG0321|consen  301 RSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCS  380 (720)
T ss_pred             cccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeec
Confidence            7643  34555554432222322235999999999999999999998876 5677889999999999999   7788889


Q ss_pred             cCCcEEEEEccCcc
Q psy7482         288 SAGDLVVWELNEDV  301 (327)
Q Consensus       288 ~dg~v~iw~~~~~~  301 (327)
                      +|-.+++|++..+.
T Consensus       381 dD~~~kiW~l~~~l  394 (720)
T KOG0321|consen  381 DDFRVKIWRLSNGL  394 (720)
T ss_pred             cCcceEEEeccCch
Confidence            99999999997763

>KOG1274|consensus

Probab=99.97  E-value=2.8e-27  Score=199.84  Aligned_cols=255  Identities=11%  Similarity=0.210  Sum_probs=211.0

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc-ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      .+|...-+.++|  +|++|.+++.||.|++|+.... +...++..+...|.+++-.  +.+|++|+.+++|.+|.+.+++
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~   87 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGE   87 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCCC
Confidence            379999999999  8999999999999999997665 4445555578888888765  5589999999999999999887


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      ....+ ....-+ +.+++++.+|++++.|+.|-.|++.++........+..     |..+|.++.|+|++++||+.+ ||
T Consensus        88 ~~~iL-~Rftlp-~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrg-----h~apVl~l~~~p~~~fLAvss~dG  160 (933)
T KOG1274|consen   88 EDTIL-ARFTLP-IRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRG-----HDAPVLQLSYDPKGNFLAVSSCDG  160 (933)
T ss_pred             cccee-eeeecc-ceEEEEecCCcEEEeecCceeEEEEeccccchheeecc-----cCCceeeeeEcCCCCEEEEEecCc
Confidence            76555 444444 99999999999999999999999999988766544432     345699999999999999998 99


Q ss_pred             eEEEEEecCCceeeEec---------CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee--cccceEEEEE
Q psy7482         167 KAVVFSVEKAGVLQTLK---------SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA--SASRIKGLVF  234 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~---------~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~  234 (327)
                      .|++||+.++.....+.         ....+..++|+|+ +.+++...|+.|++|+...++....+..  +...+..+.|
T Consensus       161 ~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~w  240 (933)
T KOG1274|consen  161 KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQW  240 (933)
T ss_pred             eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEE
Confidence            99999999988776664         1345678999999 8999999999999999999988877743  4445889999


Q ss_pred             EecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC
Q psy7482         235 FSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                        +|+|+|||+++.||.|.|||.++-+.    ......|.+++|.|
T Consensus       241 --sPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p  280 (933)
T KOG1274|consen  241 --SPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKP  280 (933)
T ss_pred             --cCCCcEEeeeccCCcEEEEecccchh----ccccceeEEEecCC
Confidence              49999999999999999999987221    22235788999988

>KOG0269|consensus

Probab=99.96  E-value=4.1e-29  Score=207.12  Aligned_cols=238  Identities=14%  Similarity=0.235  Sum_probs=198.0

Q ss_pred             EEEEEe---CCCEEEEecCCCeEEEEEccc---cccccccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          17 VRSVAA---TSKLAASSGADETVVLYDMVK---RKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        17 v~~~~~---~~~~l~~~~~dg~v~~w~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      +..+.|   +.++|||++..|.|.+||+..   .+.+..+..|+..++++.|++ ...+|++|+.||.|++||++..+..
T Consensus        90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~  169 (839)
T KOG0269|consen   90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK  169 (839)
T ss_pred             hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccc
Confidence            344555   788999999999999999987   677788999999999999998 4568999999999999999988888


Q ss_pred             EeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCe
Q psy7482          90 KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNK  167 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~  167 (327)
                      .++ .+.... |..+.|+| .+.+++++...|.+++||++....-    ......|.++|.|+.|+|++.+||+|+ |+.
T Consensus       170 ~t~-~~nSES-iRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~----~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~  243 (839)
T KOG0269|consen  170 STF-RSNSES-IRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRC----EKKLTAHNGPVLCLNWHPNREWLATGGRDKM  243 (839)
T ss_pred             ccc-cccchh-hhceeeccCCCceEEEecCCceEEEeeccCchhH----HHHhhcccCceEEEeecCCCceeeecCCCcc
Confidence            887 666666 99999999 6788999999999999999875432    222345577899999999999999999 999


Q ss_pred             EEEEEecCCc--eeeEecCCCceeEEEeecC--ceEEEeC--CCCcEEEEEcCCCc-eeEEeeecccceEEEEEEecCCC
Q psy7482         168 AVVFSVEKAG--VLQTLKSESKVHSVCFLNE--TTVCTGN--EESAITAYNLTDGS-HLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       168 i~i~d~~~~~--~~~~~~~~~~i~~~~~~~~--~~l~~~~--~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      |+|||+.+.+  .+.++....++.++.|-|+  ..|++++  .|-.|+|||++..- +..++..|...++.++|. +.+.
T Consensus       244 vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~-~~d~  322 (839)
T KOG0269|consen  244 VKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWD-SGDR  322 (839)
T ss_pred             EEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCccccceecc-CCCc
Confidence            9999998654  4556667899999999998  5677665  57789999997653 467788999999999995 3567


Q ss_pred             cEEEEecCCCeEEEEEcCCCc
Q psy7482         241 TTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      ..+.+++.||.+..-.+++..
T Consensus       323 ~~l~s~sKD~tv~qh~~knat  343 (839)
T KOG0269|consen  323 INLWSCSKDGTVLQHLFKNAT  343 (839)
T ss_pred             eeeEeecCccHHHHhhhhccc
Confidence            789999999988776655543

>KOG4283|consensus

Probab=99.96  E-value=2.8e-27  Score=175.72  Aligned_cols=279  Identities=16%  Similarity=0.263  Sum_probs=213.7

Q ss_pred             cCCccEEEEEe---CCCEEEEecCCCeEEEEEcccccc---------------ccccccccccEEEEEECC-CCCeEEEe
Q psy7482          12 SHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQ---------------SGALMQHEGTITCLKFTP-EGSHLISC   72 (327)
Q Consensus        12 ~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~---------------~~~~~~~~~~v~~~~~~~-~~~~l~~~   72 (327)
                      -|.+.|+++..   .|+++++|+.||.|.+||+++-..               ...-.+|.-.|..+.|-| |...+.++
T Consensus        41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss  120 (397)
T KOG4283|consen   41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS  120 (397)
T ss_pred             cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence            58999999999   899999999999999999986431               011235888999999999 55678889


Q ss_pred             cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC---CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          73 SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS---GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        73 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      +.|.++++||.++.+....|  ...+. |.+-+++|-   ..++++|..+-.|++-|+.+|.....+.     .|.+.|.
T Consensus       121 SFDhtlKVWDtnTlQ~a~~F--~me~~-VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~Ls-----GHr~~vl  192 (397)
T KOG4283|consen  121 SFDHTLKVWDTNTLQEAVDF--KMEGK-VYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLS-----GHRDGVL  192 (397)
T ss_pred             cccceEEEeecccceeeEEe--ecCce-eehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeec-----cccCceE
Confidence            99999999999998888777  23334 888889883   3467788888999999999998865543     3345699


Q ss_pred             EEEEccCCcEE-Eeec-CCeEEEEEecCC-ceeeEe---------------cCCCceeEEEeecC-ceEEEeCCCCcEEE
Q psy7482         150 SVVWSPEGLLY-AIPI-QNKAVVFSVEKA-GVLQTL---------------KSESKVHSVCFLNE-TTVCTGNEESAITA  210 (327)
Q Consensus       150 ~~~~~~~~~~l-~~~~-~~~i~i~d~~~~-~~~~~~---------------~~~~~i~~~~~~~~-~~l~~~~~d~~i~i  210 (327)
                      ++.|+|...++ ++|+ ||.|++||++.. .+...+               .|.+.+..++|..+ .++++.+.|..+++
T Consensus       193 aV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~  272 (397)
T KOG4283|consen  193 AVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRV  272 (397)
T ss_pred             EEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEE
Confidence            99999988754 5566 999999999764 222221               26778999999998 78999999999999


Q ss_pred             EEcCCCcee-EEe--eecccceEEEEEEe-cCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEE
Q psy7482         211 YNLTDGSHL-WQI--KASASRIKGLVFFS-IPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLI  284 (327)
Q Consensus       211 ~d~~~~~~~-~~~--~~~~~~v~~~~~~~-s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~  284 (327)
                      |+..+|+.. ..+  ..|.. -...++.. +.+...++---.++.+.++++-++..+..+..|-..|.+.++.|  +...
T Consensus       273 wn~~~G~ntl~~~g~~~~n~-~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~  351 (397)
T KOG4283|consen  273 WNMESGRNTLREFGPIIHNQ-TTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCF  351 (397)
T ss_pred             eecccCcccccccccccccc-cccceEEEeecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhh
Confidence            999887542 111  11111 01111110 13444555555568999999999999999999988999999998  8899


Q ss_pred             EEecCCcEEEEEccC
Q psy7482         285 CITSAGDLVVWELNE  299 (327)
Q Consensus       285 ~~~~dg~v~iw~~~~  299 (327)
                      +++.|+.+..|-...
T Consensus       352 tg~~d~ni~~w~p~l  366 (397)
T KOG4283|consen  352 TGDMNGNIYMWSPAL  366 (397)
T ss_pred             ccccCCccccccccc
Confidence            999999999998843

>KOG1332|consensus

Probab=99.96  E-value=4.4e-28  Score=175.22  Aligned_cols=246  Identities=18%  Similarity=0.302  Sum_probs=195.2

Q ss_pred             ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC---eEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEE
Q psy7482          51 MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW---QLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTW  125 (327)
Q Consensus        51 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw  125 (327)
                      ..|.+.|..+...-.|++||+++.|++|+|+.+++.   +++.++ .+|.++ |..++|..  -|.+|++++.||.|.||
T Consensus         8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L-~Gh~GP-Vwqv~wahPk~G~iLAScsYDgkVIiW   85 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAEL-TGHSGP-VWKVAWAHPKFGTILASCSYDGKVIIW   85 (299)
T ss_pred             hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEe-cCCCCC-eeEEeecccccCcEeeEeecCceEEEE
Confidence            468888888888778999999999999999999764   456677 899988 99999976  79999999999999999


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEccCC--cEEEeec-CCeEEEEEecCC-c-eeeEe--cCCCceeEEEeecC--
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEG--LLYAIPI-QNKAVVFSVEKA-G-VLQTL--KSESKVHSVCFLNE--  196 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~-~~~i~i~d~~~~-~-~~~~~--~~~~~i~~~~~~~~--  196 (327)
                      .-++++..+.   ..+..|...+++++|.|.+  -.|++++ ||.|.+++.+.. . ....+  .|.-.+++++|.|.  
T Consensus        86 ke~~g~w~k~---~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~  162 (299)
T KOG1332|consen   86 KEENGRWTKA---YEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASA  162 (299)
T ss_pred             ecCCCchhhh---hhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCC
Confidence            9888755433   3334456679999999965  4667665 999999998765 2 12222  28888999999875  


Q ss_pred             -------------ceEEEeCCCCcEEEEEcCCCc--eeEEeeecccceEEEEEEecC--CCcEEEEecCCCeEEEEEcCC
Q psy7482         197 -------------TTVCTGNEESAITAYNLTDGS--HLWQIKASASRIKGLVFFSIP--QETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       197 -------------~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~s~--~~~~l~~~~~d~~i~i~d~~~  259 (327)
                                   ..|++|+.|..|+||+..+++  .-.++.+|.+.|+.++|.|+-  ...+|++++.||++.||..+.
T Consensus       163 ~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~  242 (299)
T KOG1332|consen  163 PGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDE  242 (299)
T ss_pred             CccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecC
Confidence                         259999999999999998753  344589999999999998522  235799999999999998763


Q ss_pred             Cc---eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482         260 GS---HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       260 ~~---~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      ..   ....+......++.+.|+.  +.|+.++.|+.|.+|.-+...
T Consensus       243 e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~G  289 (299)
T KOG1332|consen  243 EYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDG  289 (299)
T ss_pred             ccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCCC
Confidence            21   2223334456899999999  999999999999999877653

>KOG0269|consensus

Probab=99.96  E-value=2.4e-28  Score=202.66  Aligned_cols=274  Identities=14%  Similarity=0.257  Sum_probs=207.8

Q ss_pred             EEEEEe--CCCEEEEecCCCeEEEEEcccccc----cccccc---ccccEEEEEECC-CCCeEEEecCCCcEEEEEcCC-
Q psy7482          17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQ----SGALMQ---HEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS-   85 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~----~~~~~~---~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~-   85 (327)
                      ..+++.  +-..++.++. ..++||.+.....    ...+..   -...+..++|.. +.++||+++..|.|.+||+.. 
T Consensus        42 ~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~  120 (839)
T KOG0269|consen   42 ANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKS  120 (839)
T ss_pred             cceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCcc
Confidence            445555  5566777763 4678887654321    111111   123456677875 577999999999999999986 


Q ss_pred             --CeEEEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC-CcEEE
Q psy7482          86 --WQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE-GLLYA  161 (327)
Q Consensus        86 --~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~  161 (327)
                        .+.+..+ ..|... ++++.|++ ...+|++|++||.|++||++..+....+...     ...|+.+.|+|. +..|+
T Consensus       121 ~rnk~l~~f-~EH~Rs-~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~n-----SESiRDV~fsp~~~~~F~  193 (839)
T KOG0269|consen  121 IRNKLLTVF-NEHERS-ANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSN-----SESIRDVKFSPGYGNKFA  193 (839)
T ss_pred             ccchhhhHh-hhhccc-eeeeeeccCCccEEEecCCCceEEEEeeeccccccccccc-----chhhhceeeccCCCceEE
Confidence              4445566 788888 99999998 5679999999999999999988776655443     344999999994 56777


Q ss_pred             eec-CCeEEEEEecCCc-eeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce--eEEeeecccceEEEEEE
Q psy7482         162 IPI-QNKAVVFSVEKAG-VLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH--LWQIKASASRIKGLVFF  235 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~-~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~  235 (327)
                      ++. .|.+++||++... ....+. |.+++.++.|+|+ .+|++|+.|+.|+|||..+.+.  +.++. ...++..+.|.
T Consensus       194 s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tIn-Tiapv~rVkWR  272 (839)
T KOG0269|consen  194 SIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTIN-TIAPVGRVKWR  272 (839)
T ss_pred             EecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEe-ecceeeeeeec
Confidence            776 7999999998754 344444 9999999999999 8999999999999999986554  33333 34689999997


Q ss_pred             ecCCCcEEEEec--CCCeEEEEEcCCCc-eeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCc
Q psy7482         236 SIPQETTVCTGN--EESAITAYNLTDGS-HLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       236 ~s~~~~~l~~~~--~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~  300 (327)
                      | ....+|++++  .|-.|+|||++..- +..++..|...++.++|..   ..+.+++.||+|..-.++..
T Consensus       273 P-~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kna  342 (839)
T KOG0269|consen  273 P-ARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNA  342 (839)
T ss_pred             c-CccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhcc
Confidence            4 3445677665  47789999998765 6788999999999999987   88999999999876655544

>KOG2055|consensus

Probab=99.96  E-value=3.2e-27  Score=185.12  Aligned_cols=265  Identities=15%  Similarity=0.258  Sum_probs=212.1

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCC--eEEEeEEecccCCceeeEEEecCCC-EEEEEeCCCCEEEEEcCCC
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKG  130 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~  130 (327)
                      .+.|+++.|+|....|++++.|++++||.+...  ..++.+  .-...||.+..|.|+|. .+++++....++.||+.+.
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~--~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~a  290 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSI--HLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETA  290 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheee--eeccCccceeeecCCCceEEEecccceEEEEeecccc
Confidence            467999999999999999999999999988632  233333  22344599999999998 8999999999999999988


Q ss_pred             ceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcE
Q psy7482         131 RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAI  208 (327)
Q Consensus       131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i  208 (327)
                      +.....+.....  ...+.....+|++++++..+ .|.|.+....+++.+..++.++.+..++|+.+ ..|++.+.+|.|
T Consensus       291 k~~k~~~~~g~e--~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV  368 (514)
T KOG2055|consen  291 KVTKLKPPYGVE--EKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEV  368 (514)
T ss_pred             ccccccCCCCcc--cchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceE
Confidence            765554443332  33478889999999998887 89999999999999999999999999999988 788888899999


Q ss_pred             EEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC------CceeEEeecccCceEEEeeeC--
Q psy7482         209 TAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD------GSHLWHIKASASRIKGLASHR--  280 (327)
Q Consensus       209 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~v~~~~~~~--  280 (327)
                      .+||++...+++.+... +.|....+.+++++.+||+|+..|.|.|||..+      .+++..+..-...|+++.|++  
T Consensus       369 ~v~nl~~~~~~~rf~D~-G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~  447 (514)
T KOG2055|consen  369 YVWNLRQNSCLHRFVDD-GSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDA  447 (514)
T ss_pred             EEEecCCcceEEEEeec-CccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcch
Confidence            99999999988888643 445555555579999999999999999999653      457788877788999999999  


Q ss_pred             cEEEEEec--CCcEEEEEccCccCCCceeeeecC-CCCceEEEEeCCC
Q psy7482         281 NHLICITS--AGDLVVWELNEDVTREPQRVSATN-DGCRFTCLAIRPP  325 (327)
Q Consensus       281 ~~l~~~~~--dg~v~iw~~~~~~~~~~~~~~~~~-~~~~i~~l~~~p~  325 (327)
                      ++||.+|.  +..+|+-.+.+...  ..-.+..+ .-+.++|++|+|.
T Consensus       448 qiLAiaS~~~knalrLVHvPS~TV--FsNfP~~n~~vg~vtc~aFSP~  493 (514)
T KOG2055|consen  448 QILAIASRVKKNALRLVHVPSCTV--FSNFPTSNTKVGHVTCMAFSPN  493 (514)
T ss_pred             hhhhhhhhccccceEEEeccceee--eccCCCCCCcccceEEEEecCC
Confidence            77777764  56799998887631  11111112 3367999999995

>KOG2048|consensus

Probab=99.96  E-value=5.3e-26  Score=186.19  Aligned_cols=264  Identities=14%  Similarity=0.254  Sum_probs=214.4

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      -..+|.+|||+.+.+.||.+-.||.|.+|++..+-.......++.+..|.+++|.+ +..|++.+.+|.|.-||+.+++.
T Consensus        24 ~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e-~~RLFS~g~sg~i~EwDl~~lk~  102 (691)
T KOG2048|consen   24 KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAE-GGRLFSSGLSGSITEWDLHTLKQ  102 (691)
T ss_pred             eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEcc-CCeEEeecCCceEEEEecccCce
Confidence            35789999999999999999999999999998765544443677776799999995 45688888999999999999988


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCCc
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEESA  207 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~~  207 (327)
                      .........     .|.+++.+|.+..+++|. ||.+..++...++......   ..+++.++.|+|+ ..++.|+.||.
T Consensus       103 ~~~~d~~gg-----~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~  177 (691)
T KOG2048|consen  103 KYNIDSNGG-----AIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGV  177 (691)
T ss_pred             eEEecCCCc-----ceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCce
Confidence            766554443     499999999999999986 8877778877776655433   5689999999999 55999999999


Q ss_pred             EEEEEcCCCceeEEee--------ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeee
Q psy7482         208 ITAYNLTDGSHLWQIK--------ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASH  279 (327)
Q Consensus       208 i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  279 (327)
                      |++||...+..++...        ....-|.++.|.   ....|++|..-|.|.+||...+.++..+..|...|.+++..
T Consensus       178 Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~L---rd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~  254 (691)
T KOG2048|consen  178 IRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFL---RDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVA  254 (691)
T ss_pred             EEEEEcCCCceEEEeeecccccccCCceEEEEEEEe---ecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEc
Confidence            9999999988766221        123357778874   56789999999999999999999999999999999999999


Q ss_pred             C--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         280 R--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       280 ~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +  +++++++.|+.|..+...+...+-.....+..|...|.+++..++
T Consensus       255 ~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~  302 (691)
T KOG2048|consen  255 DNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN  302 (691)
T ss_pred             CCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc
Confidence            8  899999999999999988874322222334456777888887665

>KOG2445|consensus

Probab=99.96  E-value=2.5e-26  Score=171.49  Aligned_cols=244  Identities=14%  Similarity=0.297  Sum_probs=186.7

Q ss_pred             ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC----CeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEE
Q psy7482          51 MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS----WQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRT  124 (327)
Q Consensus        51 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~----~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i  124 (327)
                      .+|.+-|+++.|.+.|+.+|+|+.|++++|||.++    ..+.... ..|.+. |..+.|.+  -|+.+++++.|+++.|
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~W-rah~~S-i~rV~WAhPEfGqvvA~cS~Drtv~i   87 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSW-RAHDGS-IWRVVWAHPEFGQVVATCSYDRTVSI   87 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeE-EecCCc-EEEEEecCccccceEEEEecCCceee
Confidence            36889999999999999999999999999999643    3455556 788888 99999976  5899999999999999


Q ss_pred             EEcCCC-------ceeeeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCceeeE------ec-----
Q psy7482         125 WNLVKG-------RSAYITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGVLQT------LK-----  183 (327)
Q Consensus       125 wd~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~~~~------~~-----  183 (327)
                      |.-...       +.+....+...   ...|.++.|.|.  |-.+++++ ||.++||+......+..      ++     
T Consensus        88 WEE~~~~~~~~~~~Wv~~ttl~Ds---rssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~p  164 (361)
T KOG2445|consen   88 WEEQEKSEEAHGRRWVRRTTLVDS---RSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDP  164 (361)
T ss_pred             eeecccccccccceeEEEEEeecC---CcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCC
Confidence            985211       12222222222   345999999995  55677776 99999998765432222      22     


Q ss_pred             ---CCCceeEEEeecC----ceEEEeCCC-----CcEEEEEcCCCc----eeEEeeecccceEEEEEEecC--CCcEEEE
Q psy7482         184 ---SESKVHSVCFLNE----TTVCTGNEE-----SAITAYNLTDGS----HLWQIKASASRIKGLVFFSIP--QETTVCT  245 (327)
Q Consensus       184 ---~~~~i~~~~~~~~----~~l~~~~~d-----~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~s~--~~~~l~~  245 (327)
                         +..+-.|+.|+|.    .++++|+.+     +.+.||......    .+.++.+|..+|++++|.|+-  .-..||+
T Consensus       165 p~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAv  244 (361)
T KOG2445|consen  165 PGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAV  244 (361)
T ss_pred             cccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEE
Confidence               4556778999875    567887766     578888765433    456678999999999997521  2357899


Q ss_pred             ecCCCeEEEEEcCCC--------------------ceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         246 GNEESAITAYNLTDG--------------------SHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       246 ~~~d~~i~i~d~~~~--------------------~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++.|| |+||.+...                    +.+..+..|++.|+.+.|+-  ..|++.+.||.||+|..+-.
T Consensus       245 A~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~  320 (361)
T KOG2445|consen  245 ATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYN  320 (361)
T ss_pred             eecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhh
Confidence            99999 999998731                    24566789999999999988  89999999999999987665

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.96  E-value=3.5e-25  Score=179.78  Aligned_cols=251  Identities=12%  Similarity=0.154  Sum_probs=189.9

Q ss_pred             cEEEEEe--CCCEE-EEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCCCeEEEe
Q psy7482          16 SVRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        16 ~v~~~~~--~~~~l-~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~   91 (327)
                      .+.+++|  +++.+ ++++.++.|++||..+++....+..+.. +..++|+|+++.++++ +.++.+++||+.+.+.+..
T Consensus        32 ~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~  110 (300)
T TIGR03866        32 RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAE  110 (300)
T ss_pred             CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeE
Confidence            3567888  77765 6777899999999999887776665443 5678999999977654 5689999999998877776


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeCCC-CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c-CCeE
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGKDK-TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-QNKA  168 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~i  168 (327)
                      + .. ... +.+++|+|++++++++..++ .+..||.++++.........      .+..++|+|+++.++++ . ++.+
T Consensus       111 ~-~~-~~~-~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~~~v  181 (300)
T TIGR03866       111 I-PV-GVE-PEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQ------RPRFAEFTADGKELWVSSEIGGTV  181 (300)
T ss_pred             e-eC-CCC-cceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCC------CccEEEECCCCCEEEEEcCCCCEE
Confidence            6 22 223 78899999999999888765 46778988776654433222      26789999999977554 3 8999


Q ss_pred             EEEEecCCceeeEecCC--------CceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecC
Q psy7482         169 VVFSVEKAGVLQTLKSE--------SKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIP  238 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~~~--------~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~  238 (327)
                      .+||+++++.+..+...        .....++|+|+ ..+ ++...++.+.+||+++++.+..+. +...+.+++|+  |
T Consensus       182 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~--~  258 (300)
T TIGR03866       182 SVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFT--P  258 (300)
T ss_pred             EEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEEC--C
Confidence            99999998877765411        12356889998 443 444567789999999887766553 44578899994  8


Q ss_pred             CCcEEEEe-cCCCeEEEEEcCCCceeEEeecccCceEEEeeeC
Q psy7482         239 QETTVCTG-NEESAITAYNLTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       239 ~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                      +|++|+++ ..++.|.+||+.+++.+..++... ..++++++|
T Consensus       259 ~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~~~  300 (300)
T TIGR03866       259 DEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGR-LPWGVVVRP  300 (300)
T ss_pred             CCCEEEEEcCCCCeEEEEECCCCcEEEEEEccc-ccceeEeCC
Confidence            99999876 568999999999999999988654 558888875

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0267|consensus

Probab=99.96  E-value=4.3e-29  Score=205.57  Aligned_cols=230  Identities=22%  Similarity=0.341  Sum_probs=208.6

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      .|+..|.++..  .++.+++|+.|..+-+|.+.....+..+.+|..+|.++.|+++..+|++|+.+|+|++||++.++.+
T Consensus        26 ~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~v  105 (825)
T KOG0267|consen   26 AHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIV  105 (825)
T ss_pred             hhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhh
Confidence            68899999887  8899999999999999999888888889999999999999999999999999999999999999999


Q ss_pred             EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeE
Q psy7482          90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKA  168 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i  168 (327)
                      +++ .+|... +.++.|+|-+.+.++|+.|+.+++||.+...+...+..     |...+..+.|+|+|++++.++ |..+
T Consensus       106 rtL-tgh~~~-~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s-----~~~vv~~l~lsP~Gr~v~~g~ed~tv  178 (825)
T KOG0267|consen  106 RTL-TGHLLN-ITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKS-----HTRVVDVLRLSPDGRWVASGGEDNTV  178 (825)
T ss_pred             hhh-hccccC-cceeeeccceEEeccccccccceehhhhccCceeeecC-----CcceeEEEeecCCCceeeccCCccee
Confidence            999 899988 99999999999999999999999999987666555443     234489999999999999998 6999


Q ss_pred             EEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEe
Q psy7482         169 VVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG  246 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~  246 (327)
                      ++||...|+....|+ |...+.++.|+|. -+++.|+.|+++++||+++.+.+...+.....|.+.+|.  |++..+++|
T Consensus       179 ki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn--~~~~~~~~G  256 (825)
T KOG0267|consen  179 KIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFN--PDGKIVLSG  256 (825)
T ss_pred             eeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeec--CCceeeecC
Confidence            999999999999999 9999999999998 678899999999999999988888888788899999995  899999988


Q ss_pred             cCCC
Q psy7482         247 NEES  250 (327)
Q Consensus       247 ~~d~  250 (327)
                      ..+.
T Consensus       257 ~q~s  260 (825)
T KOG0267|consen  257 EQIS  260 (825)
T ss_pred             chhh
Confidence            7654

>KOG4283|consensus

Probab=99.96  E-value=3e-26  Score=170.30  Aligned_cols=262  Identities=19%  Similarity=0.291  Sum_probs=195.6

Q ss_pred             ccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCe----------EEEeE----EecccCCceeeEEEec-CCCEEE
Q psy7482          51 MQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQ----------LEKLF----KKAHKGTAVNHISIHP-SGKLAL  114 (327)
Q Consensus        51 ~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~----------~~~~~----~~~~~~~~v~~~~~~~-~~~~l~  114 (327)
                      ..|.+.|+++...+ .|+++++|+.||.|.+||+++..          ....+    ..+|.-. |..+.|-| |...+.
T Consensus        40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~-iss~~WyP~DtGmFt  118 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYA-ISSAIWYPIDTGMFT  118 (397)
T ss_pred             ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceee-eeeeEEeeecCceee
Confidence            45889999999988 78999999999999999997532          11111    1344445 99999999 677888


Q ss_pred             EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC---cEEEeec-CCeEEEEEecCCceeeEec-CCCcee
Q psy7482         115 SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG---LLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVH  189 (327)
Q Consensus       115 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~  189 (327)
                      +++.|.++++||..+.+....++++..      |.+-+++|-.   .++|+|. +-.|++.|+.+|..-..+. |...|.
T Consensus       119 ssSFDhtlKVWDtnTlQ~a~~F~me~~------VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vl  192 (397)
T KOG4283|consen  119 SSSFDHTLKVWDTNTLQEAVDFKMEGK------VYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVL  192 (397)
T ss_pred             cccccceEEEeecccceeeEEeecCce------eehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceE
Confidence            999999999999999998888888877      8888999843   4778887 7899999999999999998 999999


Q ss_pred             EEEeecC--ceEEEeCCCCcEEEEEcCCC-ceeEE--------------eeecccceEEEEEEecCCCcEEEEecCCCeE
Q psy7482         190 SVCFLNE--TTVCTGNEESAITAYNLTDG-SHLWQ--------------IKASASRIKGLVFFSIPQETTVCTGNEESAI  252 (327)
Q Consensus       190 ~~~~~~~--~~l~~~~~d~~i~i~d~~~~-~~~~~--------------~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i  252 (327)
                      ++.|+|.  -.|++|+.||.|++||++.. .+...              -..|.+.+..++|.  .++.++++.+.|..+
T Consensus       193 aV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~t--Sd~~~l~~~gtd~r~  270 (397)
T KOG4283|consen  193 AVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWT--SDARYLASCGTDDRI  270 (397)
T ss_pred             EEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeec--ccchhhhhccCccce
Confidence            9999997  45889999999999999864 22222              24577889999994  899999999999999


Q ss_pred             EEEEcCCCceeE-Eee--cccCceEEEee---eC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482         253 TAYNLTDGSHLW-HIK--ASASRIKGLAS---HR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       253 ~i~d~~~~~~~~-~~~--~~~~~v~~~~~---~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                      ++|+..+|+... .+-  .|+. -.++++   +.  ..++---.++.+.++.+-.+.  ....+  ..|..+|.|.++.|
T Consensus       271 r~wn~~~G~ntl~~~g~~~~n~-~~~~~~~~~~~~s~vfv~~p~~~~lall~~~sgs--~ir~l--~~h~k~i~c~~~~~  345 (397)
T KOG4283|consen  271 RVWNMESGRNTLREFGPIIHNQ-TTSFAVHIQSMDSDVFVLFPNDGSLALLNLLEGS--FVRRL--STHLKRINCAAYRP  345 (397)
T ss_pred             EEeecccCcccccccccccccc-cccceEEEeecccceEEEEecCCeEEEEEccCce--EEEee--ecccceeeEEeecC
Confidence            999998876221 111  1111 011111   11  344444455777787777772  22222  23466788888777


Q ss_pred             CC
Q psy7482         325 PV  326 (327)
Q Consensus       325 ~~  326 (327)
                      ++
T Consensus       346 ~f  347 (397)
T KOG4283|consen  346 DF  347 (397)
T ss_pred             ch
Confidence            64

>KOG1274|consensus

Probab=99.96  E-value=5.8e-26  Score=191.96  Aligned_cols=256  Identities=15%  Similarity=0.267  Sum_probs=209.3

Q ss_pred             ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC-eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC
Q psy7482          51 MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        51 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  129 (327)
                      ..|....+.++|.|+|++|++++.||.|++|+..+. +....+ ..+... |.+++..  +.+|++++.+++|.+|...+
T Consensus        10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti-~~~g~~-v~~ia~~--s~~f~~~s~~~tv~~y~fps   85 (933)
T KOG1274|consen   10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETI-DISGEL-VSSIACY--SNHFLTGSEQNTVLRYKFPS   85 (933)
T ss_pred             hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchh-hccCce-eEEEeec--ccceEEeeccceEEEeeCCC
Confidence            368888999999999999999999999999998766 333444 224443 7766654  55899999999999999988


Q ss_pred             CceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCC
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEES  206 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~  206 (327)
                      ++.-..+..-     .-++++++++.+|++++.|+ |-.|++.++.+......+. |.++|.++.|+|+ ++|++.+.||
T Consensus        86 ~~~~~iL~Rf-----tlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG  160 (933)
T KOG1274|consen   86 GEEDTILARF-----TLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDG  160 (933)
T ss_pred             CCccceeeee-----eccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCc
Confidence            7764322211     12399999999999999998 7889999999988888887 9999999999998 8999999999


Q ss_pred             cEEEEEcCCCceeEEeee--------cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec--ccCceEEE
Q psy7482         207 AITAYNLTDGSHLWQIKA--------SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA--SASRIKGL  276 (327)
Q Consensus       207 ~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~  276 (327)
                      .|++||+.++...+++.+        ....+..++|+  |++..++..+.|+.|++|+..+.+....+..  +...+..+
T Consensus       161 ~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~--Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~  238 (933)
T KOG1274|consen  161 KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWH--PKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDL  238 (933)
T ss_pred             eEEEEEcccchhhhhcccCCccccccccceeeeeeec--CCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEE
Confidence            999999999877665532        13456778895  8988999999999999999999988877763  34458999


Q ss_pred             eeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         277 ASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       277 ~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +|+|  .|||+++.||.|.|||.++-.        .......|.|++|.|+
T Consensus       239 ~wsPnG~YiAAs~~~g~I~vWnv~t~~--------~~~~~~~Vc~~aw~p~  281 (933)
T KOG1274|consen  239 QWSPNGKYIAASTLDGQILVWNVDTHE--------RHEFKRAVCCEAWKPN  281 (933)
T ss_pred             EEcCCCcEEeeeccCCcEEEEecccch--------hccccceeEEEecCCC
Confidence            9999  999999999999999999852        2445567999999886

>KOG1007|consensus

Probab=99.95  E-value=2e-26  Score=170.71  Aligned_cols=266  Identities=14%  Similarity=0.197  Sum_probs=209.4

Q ss_pred             CCCeEEEEEccccc---cccccccccccEEEEEECCC-CCeEEEecCC-------CcEEEEEcCCC---------eEEEe
Q psy7482          32 ADETVVLYDMVKRK---QSGALMQHEGTITCLKFTPE-GSHLISCSDD-------GSIAIFRVGSW---------QLEKL   91 (327)
Q Consensus        32 ~dg~v~~w~~~~~~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d-------~~i~iw~~~~~---------~~~~~   91 (327)
                      .|+.|.+.++..+.   ....+..|.+.|..++-+|. .+.|+++..+       -.+.||.+...         +.+..
T Consensus        38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~  117 (370)
T KOG1007|consen   38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS  117 (370)
T ss_pred             CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence            46788888776543   22456678899999999995 4556655432       24789988542         23344


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce-eeeeeccccCccccceEEEEEcc--CCcEEEeecCCeE
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS-AYITNLSSYGVGFENLDSVVWSP--EGLLYAIPIQNKA  168 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~i  168 (327)
                      +...+.+. |.|+.|.|++..+++-. |..|.+|++..+.. ...........+.....+-+|+|  +++.+++.+|+++
T Consensus       118 Ldteavg~-i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl  195 (370)
T KOG1007|consen  118 LDTEAVGK-INCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTL  195 (370)
T ss_pred             CCHHHhCc-eeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcE
Confidence            43355565 99999999999998876 78899999998776 34444444344455688999999  7899999999999


Q ss_pred             EEEEecCCceeeEec--CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCC-ceeEEeeecccceEEEEEEecCCCcEE
Q psy7482         169 VVFSVEKAGVLQTLK--SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDG-SHLWQIKASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~--~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      ..||+++.+....+.  |...+..+.|.|+  .+|++++.||.|++||.+.. .+++++.+|...+.++.|++ ...+++
T Consensus       196 ~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~-~hdqLi  274 (370)
T KOG1007|consen  196 QFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNP-EHDQLI  274 (370)
T ss_pred             EEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecC-ccceEE
Confidence            999999998888887  8889999999998  57899999999999999864 46899999999999999986 667889


Q ss_pred             EEecCCCeEEEEEcCC-----------------------------CceeEEeecccCceEEEeeeC---cEEEEEecCCc
Q psy7482         244 CTGNEESAITAYNLTD-----------------------------GSHLWHIKASASRIKGLASHR---NHLICITSAGD  291 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~-----------------------------~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~  291 (327)
                      ++|+.|..|.+|...+                             ...+.++..|+..|++++|+.   -.+|+-+.||.
T Consensus       275 Ls~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGR  354 (370)
T KOG1007|consen  275 LSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGR  354 (370)
T ss_pred             EecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCce
Confidence            9999999999996422                             013457778999999999998   78899999999


Q ss_pred             EEEEEccCc
Q psy7482         292 LVVWELNED  300 (327)
Q Consensus       292 v~iw~~~~~  300 (327)
                      +.|=.+...
T Consensus       355 viIs~V~r~  363 (370)
T KOG1007|consen  355 VIISSVPRF  363 (370)
T ss_pred             EEeecCChh
Confidence            988766554

>KOG0301|consensus

Probab=99.95  E-value=3.3e-26  Score=187.87  Aligned_cols=232  Identities=13%  Similarity=0.232  Sum_probs=193.8

Q ss_pred             eeeccCCccEEE-EEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           8 FVTHSHTASVRS-VAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         8 ~~~~~h~~~v~~-~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      ..+.+|.+.|.+ +++   ++..+++|+.|+++.+|...+..+...+.+|+..|.++....++. +++|+.|.++++|..
T Consensus        51 ~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~  129 (745)
T KOG0301|consen   51 HAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI  129 (745)
T ss_pred             eecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecc
Confidence            345578888888 888   567799999999999999999999999999999999999887776 999999999999986


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      .  ++...+ .+|... |+++..-|++ .+++|+.|.+|++|.-  ++.+..+     ..|.+-|+.+++-+++.++.++
T Consensus       130 ~--~l~~~l-~gH~as-VWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf-----~gHtD~VRgL~vl~~~~flScs  197 (745)
T KOG0301|consen  130 G--ELVYSL-QGHTAS-VWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTF-----SGHTDCVRGLAVLDDSHFLSCS  197 (745)
T ss_pred             h--hhhccc-CCcchh-eeeeeecCCC-cEEeccCcceeeeccC--Cchhhhh-----ccchhheeeeEEecCCCeEeec
Confidence            5  555556 899998 9999999987 7999999999999985  4554443     3346679999999998888888


Q ss_pred             cCCeEEEEEecCCceeeE-ecCCCceeEEEeec-CceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCc
Q psy7482         164 IQNKAVVFSVEKAGVLQT-LKSESKVHSVCFLN-ETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET  241 (327)
Q Consensus       164 ~~~~i~i~d~~~~~~~~~-~~~~~~i~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~  241 (327)
                      .||.|+.|++ +++.+.. ..|..-+.++.... ++.++++++|+++++|+..  ++.+.+.-....+.++.+.  ++|.
T Consensus       198 NDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L--~NgD  272 (745)
T KOG0301|consen  198 NDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVL--LNGD  272 (745)
T ss_pred             CCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEe--eCCC
Confidence            8999999999 4555554 45999999999555 5999999999999999975  6777777666689999885  4554


Q ss_pred             EEEEecCCCeEEEEEcC
Q psy7482         242 TVCTGNEESAITAYNLT  258 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~~  258 (327)
                       +++|+.||.|+||...
T Consensus       273 -Ivvg~SDG~VrVfT~~  288 (745)
T KOG0301|consen  273 -IVVGGSDGRVRVFTVD  288 (745)
T ss_pred             -EEEeccCceEEEEEec
Confidence             6778889999999865

>KOG2919|consensus

Probab=99.95  E-value=4e-26  Score=171.64  Aligned_cols=263  Identities=14%  Similarity=0.233  Sum_probs=201.6

Q ss_pred             EEEEEECCCCCeEEEecCCCcEEEEEcCCC------------eEEEeEEecccCCceeeEEEe-------cCCCEEEEEe
Q psy7482          57 ITCLKFTPEGSHLISCSDDGSIAIFRVGSW------------QLEKLFKKAHKGTAVNHISIH-------PSGKLALSVG  117 (327)
Q Consensus        57 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~------------~~~~~~~~~~~~~~v~~~~~~-------~~~~~l~~~~  117 (327)
                      ...+.|+|||..|++-+.|..+.+|++...            +....+ .-..+..|..-+|-       |+..++++.+
T Consensus        52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~-r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss  130 (406)
T KOG2919|consen   52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSY-RYQEGETVYDYCWYSRMKSDQPSTNLFAVSS  130 (406)
T ss_pred             hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeE-EeccCCEEEEEEeeeccccCCCccceeeecc
Confidence            456889999999999999999999987421            111222 11222227777775       5677899999


Q ss_pred             CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEe-cCCceeeE---ec-----CCCce
Q psy7482         118 KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSV-EKAGVLQT---LK-----SESKV  188 (327)
Q Consensus       118 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~-~~~~~~~~---~~-----~~~~i  188 (327)
                      .+.-|++||.-+|+....+..-.+........+++|+|||..|.+|....|++||+ +.|.....   +.     ..+-+
T Consensus       131 r~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~gii  210 (406)
T KOG2919|consen  131 RDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII  210 (406)
T ss_pred             ccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhccccccccee
Confidence            99999999999998876655444422233467999999999999999999999999 55543222   22     35678


Q ss_pred             eEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecC-CCeEEEEEcCCC-ceeE
Q psy7482         189 HSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNE-ESAITAYNLTDG-SHLW  264 (327)
Q Consensus       189 ~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~-~~~~  264 (327)
                      .+++|+|-  +.+++|+....+-||.-..+.++..+-+|.+.|+.+.|.  ++|+.|++|+. |-.|..||++.. .++.
T Consensus       211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~--edGn~lfsGaRk~dkIl~WDiR~~~~pv~  288 (406)
T KOG2919|consen  211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWC--EDGNKLFSGARKDDKILCWDIRYSRDPVY  288 (406)
T ss_pred             eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEec--cCcCeecccccCCCeEEEEeehhccchhh
Confidence            89999996  689999999999999998999999999999999999997  89999999886 678999999864 4778


Q ss_pred             EeecccC-ceEEEeee--C--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         265 HIKASAS-RIKGLASH--R--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       265 ~~~~~~~-~v~~~~~~--~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      .+..|.+ .-..|.|.  |  ++|++|+.||.|++||+....  . .......+..-++.++++|-
T Consensus       289 ~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~g--n-~~sv~~~~sd~vNgvslnP~  351 (406)
T KOG2919|consen  289 ALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLG--N-EVSVTGNYSDTVNGVSLNPI  351 (406)
T ss_pred             hhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCC--C-cccccccccccccceecCcc
Confidence            8887765 33445554  3  999999999999999999853  2 22223345556778888773

>KOG1408|consensus

Probab=99.95  E-value=1.5e-26  Score=190.83  Aligned_cols=243  Identities=17%  Similarity=0.268  Sum_probs=206.0

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECC---CCCeEEEecCCCcEEEEEcCC-C
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP---EGSHLISCSDDGSIAIFRVGS-W   86 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~iw~~~~-~   86 (327)
                      ....+++++.  ++++||+|..-|++++|++.+.+....+..|+.+|.|+.|+.   ..++||+++.|..|.+||+.. .
T Consensus       458 ~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny  537 (1080)
T KOG1408|consen  458 SRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY  537 (1080)
T ss_pred             cccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc
Confidence            4456888888  999999999999999999999999999999999999999986   356899999999999999964 4


Q ss_pred             eEEEeEEecccCCceeeEEEecCC--CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSG--KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      .+++++ .+|... |+++.|.-+|  ..+++++.|..|.+=-.+.......+...........+..++..|..++++++.
T Consensus       538 ~l~qtl-d~HSss-ITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c  615 (1080)
T KOG1408|consen  538 DLVQTL-DGHSSS-ITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC  615 (1080)
T ss_pred             chhhhh-cccccc-eeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe
Confidence            566677 888888 9999999877  678999999877553332222222333333333445589999999999998887


Q ss_pred             -CCeEEEEEecCCceeeEec----CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecC
Q psy7482         165 -QNKAVVFSVEKAGVLQTLK----SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIP  238 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~~~~----~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~  238 (327)
                       |..|+|||+++++..+.|+    +++....+...|. .++++.+.|.++.++|..+++++.+..+|...|+.+.|.  +
T Consensus       616 QDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~--n  693 (1080)
T KOG1408|consen  616 QDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFL--N  693 (1080)
T ss_pred             cccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeec--c
Confidence             9999999999999999998    5577888888998 789999999999999999999999999999999999995  8


Q ss_pred             CCcEEEEecCCCeEEEEEcCC
Q psy7482         239 QETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       239 ~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      |-++|++.+.||.|.||.+..
T Consensus       694 DCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  694 DCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             cchhheeecCCceEEEEECch
Confidence            999999999999999998754

>KOG1273|consensus

Probab=99.95  E-value=6e-26  Score=170.12  Aligned_cols=255  Identities=15%  Similarity=0.277  Sum_probs=193.7

Q ss_pred             EEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeee
Q psy7482          57 ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT  136 (327)
Q Consensus        57 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  136 (327)
                      ..|+.|++.|.+||+|+.||.|.|||+.+....+.+ .+|..+ |++++|+++|+.|++++.|..|.+||+..|.+.+.+
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~l-saH~~p-i~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri  103 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARML-SAHVRP-ITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI  103 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhh-hccccc-eeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence            789999999999999999999999999998888888 888887 999999999999999999999999999999999998


Q ss_pred             eccccCccccceEEEEEccCCcE--EEeecCCeEEEEEecCCceeeEec--CC----CceeEEEeecC-ceEEEeCCCCc
Q psy7482         137 NLSSYGVGFENLDSVVWSPEGLL--YAIPIQNKAVVFSVEKAGVLQTLK--SE----SKVHSVCFLNE-TTVCTGNEESA  207 (327)
Q Consensus       137 ~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~~~i~i~d~~~~~~~~~~~--~~----~~i~~~~~~~~-~~l~~~~~d~~  207 (327)
                      .+...      |....|+|....  +++-.+..-.+.++...+. ..+.  ..    ....+..|.+. +++++|...|.
T Consensus       104 rf~sp------v~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h-~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGk  176 (405)
T KOG1273|consen  104 RFDSP------VWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH-SVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGK  176 (405)
T ss_pred             EccCc------cceeeeccccCCeEEEEEecCCcEEEEecCCce-eeccCCCccccccccccccccCCCCEEEEecCcce
Confidence            88877      999999996543  3333355555555554221 1121  11    11222346666 89999999999


Q ss_pred             EEEEEcCCCceeEEeeecc-cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC-------c--eeEEeec--ccCceEE
Q psy7482         208 ITAYNLTDGSHLWQIKASA-SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG-------S--HLWHIKA--SASRIKG  275 (327)
Q Consensus       208 i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~-------~--~~~~~~~--~~~~v~~  275 (327)
                      +.+||..+.+++..++... ..|..+.+.  ..|+.|+.-+.|..|+.|+++.-       +  +.+.++.  ....-.+
T Consensus       177 llv~~a~t~e~vas~rits~~~IK~I~~s--~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~  254 (405)
T KOG1273|consen  177 LLVYDAETLECVASFRITSVQAIKQIIVS--RKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKK  254 (405)
T ss_pred             EEEEecchheeeeeeeechheeeeEEEEe--ccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhh
Confidence            9999999999998887766 789999994  89999999999999999997631       1  1111111  1123346


Q ss_pred             EeeeC--cEEEEEecC-CcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         276 LASHR--NHLICITSA-GDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       276 ~~~~~--~~l~~~~~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++|+.  .+++.++.. ..++||.-..+   ....+.....+.....+.|+|-
T Consensus       255 ccfs~dgeYv~a~s~~aHaLYIWE~~~G---sLVKILhG~kgE~l~DV~whp~  304 (405)
T KOG1273|consen  255 CCFSGDGEYVCAGSARAHALYIWEKSIG---SLVKILHGTKGEELLDVNWHPV  304 (405)
T ss_pred             eeecCCccEEEeccccceeEEEEecCCc---ceeeeecCCchhheeecccccc
Confidence            67777  666666643 45999999998   4444444555567778888873

>KOG1445|consensus

Probab=99.95  E-value=7.3e-26  Score=184.65  Aligned_cols=114  Identities=15%  Similarity=0.253  Sum_probs=102.8

Q ss_pred             ceeEEEeec-C-ceEEEeCCCCcEEEEEcCCC-------ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         187 KVHSVCFLN-E-TTVCTGNEESAITAYNLTDG-------SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       187 ~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~-------~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      .|+.+.|.| | ..|++++.||.|++|.+..+       .+...+..|...|+++.|+| -....|++++.|.+|++||+
T Consensus       629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHP-LAadvLa~asyd~Ti~lWDl  707 (1012)
T KOG1445|consen  629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHP-LAADVLAVASYDSTIELWDL  707 (1012)
T ss_pred             eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecc-hhhhHhhhhhccceeeeeeh
Confidence            477888988 4 78999999999999998754       34556788999999999996 67889999999999999999


Q ss_pred             CCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482         258 TDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       258 ~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      .+++....+.+|.+.|.+++|+|  +.+++.+.||+|++|+.....
T Consensus       708 ~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e  753 (1012)
T KOG1445|consen  708 ANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE  753 (1012)
T ss_pred             hhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence            99999999999999999999999  999999999999999998873

>KOG4378|consensus

Probab=99.95  E-value=8e-26  Score=179.18  Aligned_cols=281  Identities=12%  Similarity=0.181  Sum_probs=212.0

Q ss_pred             CCeEEEEEcccccccccccccc--ccEEEEEECCCCC-eEEEecCCCcEEEEEcCCC--eEEEeEEecccCCceeeEEEe
Q psy7482          33 DETVVLYDMVKRKQSGALMQHE--GTITCLKFTPEGS-HLISCSDDGSIAIFRVGSW--QLEKLFKKAHKGTAVNHISIH  107 (327)
Q Consensus        33 dg~v~~w~~~~~~~~~~~~~~~--~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~~  107 (327)
                      ...++|||+...+....+..|+  ..+.++.|+.... ..++.+.|..+++|.-...  +....- ...... -.|++..
T Consensus        11 gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~-k~~gd~-~~Cv~~~   88 (673)
T KOG4378|consen   11 GDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVR-KLTGDN-AFCVACA   88 (673)
T ss_pred             CCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceee-ccccch-HHHHhhh
Confidence            3469999998766555444333  3488999987653 2334566888999975432  121111 111122 4555555


Q ss_pred             cCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCC-
Q psy7482         108 PSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSE-  185 (327)
Q Consensus       108 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~-  185 (327)
                      ....++++|+..+.|+|||++...+...     ...|.+.|+++.++....++|+++ .|.|.+..+.++.....+.+. 
T Consensus        89 s~S~y~~sgG~~~~Vkiwdl~~kl~hr~-----lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~s  163 (673)
T KOG4378|consen   89 SQSLYEISGGQSGCVKIWDLRAKLIHRF-----LKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDS  163 (673)
T ss_pred             hcceeeeccCcCceeeehhhHHHHHhhh-----ccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCC
Confidence            5668999999999999999984333222     233356699999999999999998 789999999999888888843 


Q ss_pred             -CceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEe-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         186 -SKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQI-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       186 -~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                       ..+.-+.|+|.  .+|.+++.+|.|.+||+....+...+ +.|..+...++|+| .+..+|++.+.|..|.+||.....
T Consensus       164 gqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfsp-sne~l~vsVG~Dkki~~yD~~s~~  242 (673)
T KOG4378|consen  164 GQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSP-SNEALLVSVGYDKKINIYDIRSQA  242 (673)
T ss_pred             CCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecC-CccceEEEecccceEEEeeccccc
Confidence             45668999997  56788999999999999887776654 68999999999986 677889999999999999999777


Q ss_pred             eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         262 HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       262 ~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ....+. ...+...++|.+  .+|+.|+..|.|..||++...  .|..+ ...|...|++++|-|-
T Consensus       243 s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k--~Pv~v-~sah~~sVt~vafq~s  304 (673)
T KOG4378|consen  243 STDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTK--APVAV-RSAHDASVTRVAFQPS  304 (673)
T ss_pred             ccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCC--CCceE-eeecccceeEEEeeec
Confidence            666655 344889999999  899999999999999999873  34333 3457777999999875

>KOG2096|consensus

Probab=99.95  E-value=2.4e-25  Score=167.17  Aligned_cols=271  Identities=14%  Similarity=0.196  Sum_probs=194.0

Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE--EeEE-ecccCCceeeEEEecCCCEEE-EEeCCCCEE
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE--KLFK-KAHKGTAVNHISIHPSGKLAL-SVGKDKTLR  123 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~-~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~  123 (327)
                      ..+++|.+.|++++|+.||++|++++.|+.|++|+++.....  +.+. .-..+. .+.+.|.||-+-++ +.-...+++
T Consensus        80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dh-pT~V~FapDc~s~vv~~~~g~~l~  158 (420)
T KOG2096|consen   80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDH-PTRVVFAPDCKSVVVSVKRGNKLC  158 (420)
T ss_pred             hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCC-ceEEEECCCcceEEEEEccCCEEE
Confidence            457899999999999999999999999999999999764321  1110 111223 67899999876544 445566899


Q ss_pred             EEEcCCCce---eee-ee---ccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEee
Q psy7482         124 TWNLVKGRS---AYI-TN---LSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFL  194 (327)
Q Consensus       124 iwd~~~~~~---~~~-~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~  194 (327)
                      +|.+...+.   ... ..   .+-+..|.-.+..+-...++.++++++ |..|.+|+++ |+.+..+. ....-+..+.+
T Consensus       159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavS  237 (420)
T KOG2096|consen  159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVS  237 (420)
T ss_pred             EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeC
Confidence            998754221   111 11   111233444566677777888999987 8999999998 88888887 55667788899


Q ss_pred             cC-ceEEEeCCCCcEEEEEcC---CC-----ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC------
Q psy7482         195 NE-TTVCTGNEESAITAYNLT---DG-----SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD------  259 (327)
Q Consensus       195 ~~-~~l~~~~~d~~i~i~d~~---~~-----~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~------  259 (327)
                      |+ .++++++-.-.|++|..-   .|     ..+..+++|...|..++|+  ++...+++.+.||.+++||..-      
T Consensus       238 P~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFs--n~S~r~vtvSkDG~wriwdtdVrY~~~q  315 (420)
T KOG2096|consen  238 PDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFS--NSSTRAVTVSKDGKWRIWDTDVRYEAGQ  315 (420)
T ss_pred             CCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeC--CCcceeEEEecCCcEEEeeccceEecCC
Confidence            99 667778888889999862   22     2466789999999999994  8999999999999999999752      


Q ss_pred             -CceeEEe----ecccCceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         260 -GSHLWHI----KASASRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       260 -~~~~~~~----~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                       .+.+.+.    ....+....++.+| ..+++.+....++++..+.+   +.....+..|+..|+||+|+|+
T Consensus       316 Dpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g---~~~~~~e~~h~~~Is~is~~~~  384 (420)
T KOG2096|consen  316 DPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDG---KDYPELEDIHSTTISSISYSSD  384 (420)
T ss_pred             CchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccC---ccchhHHHhhcCceeeEEecCC
Confidence             2222222    11223334788999 44444555778999999887   3333334458889999999995

>KOG0270|consensus

Probab=99.95  E-value=4.8e-26  Score=177.76  Aligned_cols=232  Identities=15%  Similarity=0.224  Sum_probs=177.9

Q ss_pred             CCCEEEEecCCCeEEEEEccccc---------------------cccccccccccEEEEEECCC-CCeEEEecCCCcEEE
Q psy7482          23 TSKLAASSGADETVVLYDMVKRK---------------------QSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAI   80 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~---------------------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i   80 (327)
                      .|+++|.|..|..|.|||+.-..                     .-....+|+..|.+++|+.+ .+.||+|+.|.+|++
T Consensus       191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l  270 (463)
T KOG0270|consen  191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL  270 (463)
T ss_pred             CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence            46899999999999999975211                     01113368999999999874 458999999999999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCc-eeeeeeccccCccccceEEEEEccCCc
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGR-SAYITNLSSYGVGFENLDSVVWSPEGL  158 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~  158 (327)
                      ||+.++++...+ ..|.+. |.++.|+| ....|++|+.|+++.+.|.+... ......+...      |..++|.|...
T Consensus       271 WD~~~g~p~~s~-~~~~k~-Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~------VEkv~w~~~se  342 (463)
T KOG0270|consen  271 WDVDTGKPKSSI-THHGKK-VQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGE------VEKVAWDPHSE  342 (463)
T ss_pred             EEcCCCCcceeh-hhcCCc-eeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccc------eEEEEecCCCc
Confidence            999999999998 656666 99999999 57899999999999999998522 2223334433      99999999765


Q ss_pred             -EEEeec-CCeEEEEEecCC-ceeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEE--eeecccceE
Q psy7482         159 -LYAIPI-QNKAVVFSVEKA-GVLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQ--IKASASRIK  230 (327)
Q Consensus       159 -~l~~~~-~~~i~i~d~~~~-~~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~v~  230 (327)
                       .+.+++ ||.++-+|+++. +++.+++ |.++|.++++++.  +++++++.|+.+++|++....+...  -.-.-+...
T Consensus       343 ~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~  422 (463)
T KOG0270|consen  343 NSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLH  422 (463)
T ss_pred             eeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccccccccccee
Confidence             344444 999999999976 8888888 9999999999987  8999999999999999876544221  111122344


Q ss_pred             EEEEEecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482         231 GLVFFSIPQETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                      |.++.+ .....++.|+..+.+++||+.+...+
T Consensus       423 c~~~~~-~~a~~la~GG~k~~~~vwd~~~~~~V  454 (463)
T KOG0270|consen  423 CFALDP-DVAFTLAFGGEKAVLRVWDIFTNSPV  454 (463)
T ss_pred             ecccCC-CcceEEEecCccceEEEeecccChhH
Confidence            555542 33456788888889999999876543

>KOG4328|consensus

Probab=99.95  E-value=8.8e-26  Score=176.96  Aligned_cols=281  Identities=18%  Similarity=0.217  Sum_probs=210.6

Q ss_pred             ccCCccEEEEEe----CCCEEEEecCCCeEEEEEccccc----cccccccccccEEEEEECC-CCCeEEEecCCCcEEEE
Q psy7482          11 HSHTASVRSVAA----TSKLAASSGADETVVLYDMVKRK----QSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIF   81 (327)
Q Consensus        11 ~~h~~~v~~~~~----~~~~l~~~~~dg~v~~w~~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw   81 (327)
                      +-|..+|++++|    +.+++|+|..-|+|-+||+.+.+    -+..+..|..+|.++.|+| +...+++.+.||+|++-
T Consensus       183 kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~  262 (498)
T KOG4328|consen  183 KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQ  262 (498)
T ss_pred             EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeee
Confidence            358899999999    44799999999999999995332    2345667999999999999 45689999999999999


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce-eeeeeccccCccccceEEEEEccCC-cE
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS-AYITNLSSYGVGFENLDSVVWSPEG-LL  159 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~  159 (327)
                      |++.+.....+........+..+.|+.+...++.+..=|...+||++++.. .....++     ...|.+++++|.. .+
T Consensus       263 D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh-----~kKI~sv~~NP~~p~~  337 (498)
T KOG4328|consen  263 DFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLH-----KKKITSVALNPVCPWF  337 (498)
T ss_pred             eecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhh-----hcccceeecCCCCchh
Confidence            998766544442222222277888888877888888878999999998655 2222232     2359999999965 56


Q ss_pred             EEeec-CCeEEEEEecCCc-----eeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcC----CCceeEEeeeccc-
Q psy7482         160 YAIPI-QNKAVVFSVEKAG-----VLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLT----DGSHLWQIKASAS-  227 (327)
Q Consensus       160 l~~~~-~~~i~i~d~~~~~-----~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~~-  227 (327)
                      +++++ |++.+|||++...     .+..+.|...|.+..|+|. +.|++.+.|..|+|||..    ...+..++. |.. 
T Consensus       338 laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~-Hn~~  416 (498)
T KOG4328|consen  338 LATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP-HNNR  416 (498)
T ss_pred             eeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee-ccCc
Confidence            77777 9999999998643     2556669999999999998 789999999999999983    333333332 222 


Q ss_pred             -----ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC-ceEE-EeeeC--c-EEEEEecCCcEEEEEc
Q psy7482         228 -----RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS-RIKG-LASHR--N-HLICITSAGDLVVWEL  297 (327)
Q Consensus       228 -----~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~~-~~~~~--~-~l~~~~~dg~v~iw~~  297 (327)
                           ......|  .|+..++++|..-..|-|+|-..++.+..+..... .|.+ ..|+|  . +++.++..|.|+||--
T Consensus       417 t~RwlT~fKA~W--~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~  494 (498)
T KOG4328|consen  417 TGRWLTPFKAAW--DPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTN  494 (498)
T ss_pred             ccccccchhhee--CCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEec
Confidence                 2234566  48999999999999999999988887877665543 4555 46899  4 4444556788888865


Q ss_pred             cC
Q psy7482         298 NE  299 (327)
Q Consensus       298 ~~  299 (327)
                      ..
T Consensus       495 k~  496 (498)
T KOG4328|consen  495 KK  496 (498)
T ss_pred             CC
Confidence            43

>KOG1538|consensus

Probab=99.95  E-value=8.6e-26  Score=185.26  Aligned_cols=267  Identities=16%  Similarity=0.290  Sum_probs=215.3

Q ss_pred             cEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482          16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      .|..++|  ||..|+.+. +..+.+||..+|..++++++|.+.|.|++|+.||+.+++|+.|+.|.+|+.   +....++
T Consensus        14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~---klEG~Lk   89 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTS---KLEGILK   89 (1081)
T ss_pred             chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecc---cccceee
Confidence            7889999  888887766 457999999999999999999999999999999999999999999999975   4445555


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS  172 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d  172 (327)
                      ..|.+. |.|+.|+|-...|++++- ...-+|....... ...+..      ..+.+.+|..||++++.|. +|+|.+-+
T Consensus        90 YSH~D~-IQCMsFNP~~h~LasCsL-sdFglWS~~qK~V-~K~kss------~R~~~CsWtnDGqylalG~~nGTIsiRN  160 (1081)
T KOG1538|consen   90 YSHNDA-IQCMSFNPITHQLASCSL-SDFGLWSPEQKSV-SKHKSS------SRIICCSWTNDGQYLALGMFNGTISIRN  160 (1081)
T ss_pred             eccCCe-eeEeecCchHHHhhhcch-hhccccChhhhhH-Hhhhhh------eeEEEeeecCCCcEEEEeccCceEEeec
Confidence            678888 999999998889999876 3577898765432 222222      2389999999999999997 99999886


Q ss_pred             ecCCceeeEec----CCCceeEEEeecC------ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcE
Q psy7482         173 VEKAGVLQTLK----SESKVHSVCFLNE------TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT  242 (327)
Q Consensus       173 ~~~~~~~~~~~----~~~~i~~~~~~~~------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~  242 (327)
                      -. ++....+.    .+++|.+++|+|.      ..+++.....++.+|.+. |+.+..-+.-.-...++.++  ++|.+
T Consensus       161 k~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf--~NGEy  236 (1081)
T KOG1538|consen  161 KN-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYF--TNGEY  236 (1081)
T ss_pred             CC-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhheec--cCCcE
Confidence            43 43333333    5689999999986      367788888888888874 55544333333345678886  89999


Q ss_pred             EEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         243 VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       243 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +..|+.|+.+.+|. +.|-.+.++......|+.++..|  +.++.|+.||+|-.|++-..
T Consensus       237 ~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fS  295 (1081)
T KOG1538|consen  237 ILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFS  295 (1081)
T ss_pred             EEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhHHh
Confidence            99999999999997 67888888887888999999999  99999999999999987654

>KOG0302|consensus

Probab=99.95  E-value=2e-25  Score=171.00  Aligned_cols=235  Identities=16%  Similarity=0.299  Sum_probs=182.3

Q ss_pred             cccccEEEEEECCCC--CeEEEecCCCcEEEEEcCC----------------CeEEEeEEecccCCceeeEEEecC-CCE
Q psy7482          52 QHEGTITCLKFTPEG--SHLISCSDDGSIAIFRVGS----------------WQLEKLFKKAHKGTAVNHISIHPS-GKL  112 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iw~~~~----------------~~~~~~~~~~~~~~~v~~~~~~~~-~~~  112 (327)
                      .|.+.++.+.-++-+  .+.++-+..|.|.||++..                .+++.++ .+|... =..++|+|- ...
T Consensus       149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~-~ghk~E-Gy~LdWSp~~~g~  226 (440)
T KOG0302|consen  149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTF-NGHKGE-GYGLDWSPIKTGR  226 (440)
T ss_pred             ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEe-cccCcc-ceeeecccccccc
Confidence            477778888777644  4666778899999999742                2445555 667765 789999992 335


Q ss_pred             EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecCC---ceeeEecCCCc
Q psy7482         113 ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKA---GVLQTLKSESK  187 (327)
Q Consensus       113 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~---~~~~~~~~~~~  187 (327)
                      |++|.--+.|++|...++..  .........|...|..++|+|.. ..|++|+ ||+|+|||++.+   ..+..-.|.+.
T Consensus       227 LlsGDc~~~I~lw~~~~g~W--~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sD  304 (440)
T KOG0302|consen  227 LLSGDCVKGIHLWEPSTGSW--KVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSD  304 (440)
T ss_pred             cccCccccceEeeeeccCce--eecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCc
Confidence            88888888999999988665  33333344467789999999965 5778887 999999999988   34444448999


Q ss_pred             eeEEEeecC-ceEEEeCCCCcEEEEEcCC---CceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc--
Q psy7482         188 VHSVCFLNE-TTVCTGNEESAITAYNLTD---GSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS--  261 (327)
Q Consensus       188 i~~~~~~~~-~~l~~~~~d~~i~i~d~~~---~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~--  261 (327)
                      |+.+.|+.+ .+|++|+.||+++|||+++   ++++..++-|..+|+++.|+| .+...|++++.|.+|.+||+.-..  
T Consensus       305 VNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p-~e~s~iaasg~D~QitiWDlsvE~D~  383 (440)
T KOG0302|consen  305 VNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHP-HEDSVIAASGEDNQITIWDLSVEADE  383 (440)
T ss_pred             eeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEecc-ccCceEEeccCCCcEEEEEeeccCCh
Confidence            999999988 8899999999999999976   567889999999999999986 677889999999999999985311  


Q ss_pred             --------------eeEEeecc--cCceEEEeeeC---cEEEEEecCCc
Q psy7482         262 --------------HLWHIKAS--ASRIKGLASHR---NHLICITSAGD  291 (327)
Q Consensus       262 --------------~~~~~~~~--~~~v~~~~~~~---~~l~~~~~dg~  291 (327)
                                    +.+-+--|  ...+..+.|++   .++++.+.||.
T Consensus       384 ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf  432 (440)
T KOG0302|consen  384 EEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF  432 (440)
T ss_pred             hhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce
Confidence                          11122223  34688899998   88999988885

>KOG0267|consensus

Probab=99.95  E-value=9.3e-28  Score=197.80  Aligned_cols=248  Identities=17%  Similarity=0.325  Sum_probs=213.1

Q ss_pred             EEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEE
Q psy7482          27 AASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISI  106 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~  106 (327)
                      ++....+-.+++||.+      .+-.|...|.++..-..++.+++|+.|..+-+|.+.....+..+ .+|... |.++.|
T Consensus         7 ~m~~~~~t~Lr~~~~~------~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~-~~hesp-IeSl~f   78 (825)
T KOG0267|consen    7 LMKTKRATKLRVWDTR------EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSL-TGHESP-IESLTF   78 (825)
T ss_pred             cceeeeeeccccccch------hhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhhee-eccCCc-ceeeec
Confidence            3444455567788754      34458888888888778899999999999999999887777777 889888 999999


Q ss_pred             ecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-C
Q psy7482         107 HPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-S  184 (327)
Q Consensus       107 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~  184 (327)
                      +++..+|++|+.+|+|++||++..+.+..+.     .|...+.++.|+|-+.+++.++ |..+.+||.+...+...++ |
T Consensus        79 ~~~E~LlaagsasgtiK~wDleeAk~vrtLt-----gh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~  153 (825)
T KOG0267|consen   79 DTSERLLAAGSASGTIKVWDLEEAKIVRTLT-----GHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSH  153 (825)
T ss_pred             CcchhhhcccccCCceeeeehhhhhhhhhhh-----ccccCcceeeeccceEEeccccccccceehhhhccCceeeecCC
Confidence            9999999999999999999999887655332     3344589999999999999887 9999999999888999888 7


Q ss_pred             CCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482         185 ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       185 ~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                      ...+..+.|+|+ .+++.+++|..+++||+..|+.+.+|+.|++.+..+.|+  |..-++++|+.|+++++||+++.+.+
T Consensus       154 ~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~h--p~e~Lla~Gs~d~tv~f~dletfe~I  231 (825)
T KOG0267|consen  154 TRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFH--PLEVLLAPGSSDRTVRFWDLETFEVI  231 (825)
T ss_pred             cceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccC--chhhhhccCCCCceeeeeccceeEEe
Confidence            788999999999 588899999999999999999999999999999999996  78889999999999999999999988


Q ss_pred             EEeecccCceEEEeeeC--cEEEEEecC
Q psy7482         264 WHIKASASRIKGLASHR--NHLICITSA  289 (327)
Q Consensus       264 ~~~~~~~~~v~~~~~~~--~~l~~~~~d  289 (327)
                      .........|.+++|+|  ..+++|..+
T Consensus       232 ~s~~~~~~~v~~~~fn~~~~~~~~G~q~  259 (825)
T KOG0267|consen  232 SSGKPETDGVRSLAFNPDGKIVLSGEQI  259 (825)
T ss_pred             eccCCccCCceeeeecCCceeeecCchh
Confidence            88888888999999999  555555443

>KOG1063|consensus

Probab=99.95  E-value=1.2e-24  Score=178.85  Aligned_cols=311  Identities=15%  Similarity=0.189  Sum_probs=234.4

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc-------cccccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-------QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF   81 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw   81 (327)
                      .||.+.|.++.|  .+..|++++.|.++.+|...+..       .+....+....-....|+|+++.+++-+..|..++|
T Consensus       264 ~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlW  343 (764)
T KOG1063|consen  264 MGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLW  343 (764)
T ss_pred             cCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEE
Confidence            499999999999  66689999999999999876542       122333445568889999999999999999999999


Q ss_pred             EcCCC---eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc---------------------------
Q psy7482          82 RVGSW---QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR---------------------------  131 (327)
Q Consensus        82 ~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------------------------  131 (327)
                      .....   .....+ .+|.+. |..++|+|.|.+|++++.|.+-++|-.-..+                           
T Consensus       344 kt~d~~~w~~~~~i-SGH~~~-V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~  421 (764)
T KOG1063|consen  344 KTKDKTFWTQEPVI-SGHVDG-VKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQ  421 (764)
T ss_pred             eccCccceeecccc-cccccc-ceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCce
Confidence            83321   233334 788888 9999999999999999999887765432000                           


Q ss_pred             --------eeeeeecc----------------------------------------------------------------
Q psy7482         132 --------SAYITNLS----------------------------------------------------------------  139 (327)
Q Consensus       132 --------~~~~~~~~----------------------------------------------------------------  139 (327)
                              ....+..+                                                                
T Consensus       422 FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~  501 (764)
T KOG1063|consen  422 FVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELT  501 (764)
T ss_pred             eeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhcc
Confidence                    00000000                                                                


Q ss_pred             ------------------ccCccccceEEEEEccCCcEEEeec------CCeEEEEEecCCceeeEec-CCCceeEEEee
Q psy7482         140 ------------------SYGVGFENLDSVVWSPEGLLYAIPI------QNKAVVFSVEKAGVLQTLK-SESKVHSVCFL  194 (327)
Q Consensus       140 ------------------~~~~~~~~v~~~~~~~~~~~l~~~~------~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~  194 (327)
                                        ..-.|...|.+++.+|+++++|++.      ...|++|+..+-...+.+. |.-.|+.++|+
T Consensus       502 ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FS  581 (764)
T KOG1063|consen  502 EPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFS  581 (764)
T ss_pred             CCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEEC
Confidence                              0001224588999999999999985      2469999999888888777 88999999999


Q ss_pred             cC-ceEEEeCCCCcEEEEEcCCCce----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC--ceeEE--
Q psy7482         195 NE-TTVCTGNEESAITAYNLTDGSH----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG--SHLWH--  265 (327)
Q Consensus       195 ~~-~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--~~~~~--  265 (327)
                      || .+|++.+.|.++.+|.......    ....+.|..-|.+..|.  |++.+++|+|.|.+|++|...+.  +.+..  
T Consensus       582 pdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~--pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a  659 (764)
T KOG1063|consen  582 PDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWS--PDEKYFATASRDKKVKVWEEPDLRDKYISRFA  659 (764)
T ss_pred             CCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccC--cccceeEEecCCceEEEEeccCchhhhhhhhc
Confidence            99 8999999999999998754321    23367899999999995  99999999999999999998877  43333  


Q ss_pred             eecccCceEEEeeeC-------cEEEEEecCCcEEEEEccCccC-------CCc-eeeeecCCCCceEEEEeCCC
Q psy7482         266 IKASASRIKGLASHR-------NHLICITSAGDLVVWELNEDVT-------REP-QRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       266 ~~~~~~~v~~~~~~~-------~~l~~~~~dg~v~iw~~~~~~~-------~~~-~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ...+...|+.+++.|       ..++.|-+.|.|.+|.......       ... +.-..+.+...|+.+.|.|.
T Consensus       660 ~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p~  734 (764)
T KOG1063|consen  660 CLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRPT  734 (764)
T ss_pred             hhccCCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEeccc
Confidence            345778999999998       3778888999999999762210       001 11122345678999999985

>KOG0639|consensus

Probab=99.95  E-value=3.5e-26  Score=181.46  Aligned_cols=232  Identities=22%  Similarity=0.343  Sum_probs=200.6

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEcccccc--ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      .-|+++..  ||+.|++|+.-.++.|||+....+  ...+....-...+++.+||.+..++++.||.|.|||+.+...++
T Consensus       466 nyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vr  545 (705)
T KOG0639|consen  466 NYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVR  545 (705)
T ss_pred             cceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeee
Confidence            44555555  999999999999999999976543  33444444567889999999999999999999999999999999


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEE
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAV  169 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~  169 (327)
                      .+ .+|.+. +.||.+++||..|.+|+-|.+|+.||+++++.+....+...      |.++...|++.++++|. ++.+.
T Consensus       546 qf-qGhtDG-ascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQ------IfSLg~cP~~dWlavGMens~ve  617 (705)
T KOG0639|consen  546 QF-QGHTDG-ASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQ------IFSLGYCPTGDWLAVGMENSNVE  617 (705)
T ss_pred             cc-cCCCCC-ceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhh------heecccCCCccceeeecccCcEE
Confidence            99 999999 99999999999999999999999999999998877766665      99999999999999997 78888


Q ss_pred             EEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecC
Q psy7482         170 VFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNE  248 (327)
Q Consensus       170 i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~  248 (327)
                      +......+......|++.|.++.|.+- ..+++.+.|+.+..|...-|..+...+. ...|.++.++  .|.+++++|+.
T Consensus       618 vlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE-~SsVlsCDIS--~ddkyIVTGSG  694 (705)
T KOG0639|consen  618 VLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE-SSSVLSCDIS--FDDKYIVTGSG  694 (705)
T ss_pred             EEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccc-cCcceeeeec--cCceEEEecCC
Confidence            888776665555569999999999997 7899999999999999998888877664 4568888884  89999999999


Q ss_pred             CCeEEEEEc
Q psy7482         249 ESAITAYNL  257 (327)
Q Consensus       249 d~~i~i~d~  257 (327)
                      |....+|.+
T Consensus       695 dkkATVYeV  703 (705)
T KOG0639|consen  695 DKKATVYEV  703 (705)
T ss_pred             CcceEEEEE
Confidence            998888875

>KOG0302|consensus

Probab=99.94  E-value=6.9e-25  Score=168.09  Aligned_cols=234  Identities=15%  Similarity=0.247  Sum_probs=180.3

Q ss_pred             cCCccEEEEEe----CCCEEEEecCCCeEEEEEccc----------------cccccccccccccEEEEEECCC-CCeEE
Q psy7482          12 SHTASVRSVAA----TSKLAASSGADETVVLYDMVK----------------RKQSGALMQHEGTITCLKFTPE-GSHLI   70 (327)
Q Consensus        12 ~h~~~v~~~~~----~~~~l~~~~~dg~v~~w~~~~----------------~~~~~~~~~~~~~v~~~~~~~~-~~~l~   70 (327)
                      +|.+.++.+..    +..+.|+-+..|.|+||++..                .+++.++.+|...=.+++|||- ...|+
T Consensus       149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Ll  228 (440)
T KOG0302|consen  149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLL  228 (440)
T ss_pred             ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccc
Confidence            46665555554    666778888999999999753                3567788899999999999993 23588


Q ss_pred             EecCCCcEEEEEcCCCeEE---EeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcccc
Q psy7482          71 SCSDDGSIAIFRVGSWQLE---KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFE  146 (327)
Q Consensus        71 ~~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  146 (327)
                      +|..-+.|++|...++.-.   ..+ .+|..+ |-.++|+| ....|++|+-||+|+|||++.+.....+....   |..
T Consensus       229 sGDc~~~I~lw~~~~g~W~vd~~Pf-~gH~~S-VEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kA---h~s  303 (440)
T KOG0302|consen  229 SGDCVKGIHLWEPSTGSWKVDQRPF-TGHTKS-VEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKA---HNS  303 (440)
T ss_pred             cCccccceEeeeeccCceeecCccc-cccccc-hhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeec---cCC
Confidence            8988899999998776532   234 668888 99999999 45689999999999999999985544443333   344


Q ss_pred             ceEEEEEccCCcEEEeec-CCeEEEEEecC---CceeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCce-
Q psy7482         147 NLDSVVWSPEGLLYAIPI-QNKAVVFSVEK---AGVLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSH-  218 (327)
Q Consensus       147 ~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~---~~~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~-  218 (327)
                      .|+.+.|+....+|++|. ||++.|||+++   ++++..++ |..+|+++.|+|.  ..+++++.|..|.+||+....- 
T Consensus       304 DVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~  383 (440)
T KOG0302|consen  304 DVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADE  383 (440)
T ss_pred             ceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCCh
Confidence            599999999888999998 89999999986   45778888 9999999999996  7899999999999999864211 


Q ss_pred             ---------------eEEeeec--ccceEEEEEEecCCCcEEEEecCCCe
Q psy7482         219 ---------------LWQIKAS--ASRIKGLVFFSIPQETTVCTGNEESA  251 (327)
Q Consensus       219 ---------------~~~~~~~--~~~v~~~~~~~s~~~~~l~~~~~d~~  251 (327)
                                     .+.+-.|  ...+..+.|++ ....++++.+.||.
T Consensus       384 ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~-QiPG~lvsTa~dGf  432 (440)
T KOG0302|consen  384 EEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHR-QIPGLLVSTAIDGF  432 (440)
T ss_pred             hhhccccccchhcCCceeEEEecchhHhhhheecc-CCCCeEEEecccce
Confidence                           1112223  33577888875 55667777777774

>KOG0322|consensus

Probab=99.94  E-value=5.9e-25  Score=160.87  Aligned_cols=284  Identities=15%  Similarity=0.173  Sum_probs=203.2

Q ss_pred             EEeeeeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccc-cccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482           5 TQTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         5 ~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      .+.|.+++|.+.|+++.| .+.+|.+|..-|.|++|++++.+....+. .|...|+.+.-.|+ ..|.+-+.|..+.+|+
T Consensus         5 dP~fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~   83 (323)
T KOG0322|consen    5 DPFFVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWT   83 (323)
T ss_pred             CCeeEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEE
Confidence            356788899999999999 66679999999999999999998888888 57788999999887 5688999999999999


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEec-----CCC----EEEEEeCCC-CEEEEEcCCCceeeeeeccccCccccceEEEE
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHP-----SGK----LALSVGKDK-TLRTWNLVKGRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~----~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                      +..+..+..    |.-. ++++.|.+     +++    .++.-++.. .+++-|......+.... .......+.+.+..
T Consensus        84 ia~s~~i~i----~Si~-~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~d-d~~~~Klgsvmc~~  157 (323)
T KOG0322|consen   84 IAYSAFISI----HSIV-VNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIAD-DSERSKLGSVMCQD  157 (323)
T ss_pred             ccCcceEEE----eeee-ccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccC-chhccccCceeeee
Confidence            987554432    2222 44444443     211    122111110 12222322222222211 11122234566766


Q ss_pred             EccC-C-c-EEEeec-CCeEEEEEecCCceeeEe----------c-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC
Q psy7482         153 WSPE-G-L-LYAIPI-QNKAVVFSVEKAGVLQTL----------K-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG  216 (327)
Q Consensus       153 ~~~~-~-~-~l~~~~-~~~i~i~d~~~~~~~~~~----------~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~  216 (327)
                      +..+ + . ++++|. +|.+.+||+.++..+-.+          . |..++.++.+.+. ..=++|+.+..+..|++...
T Consensus       158 ~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s  237 (323)
T KOG0322|consen  158 KDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHS  237 (323)
T ss_pred             ccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccc
Confidence            5432 2 3 445555 899999999987433322          2 7789999999876 66678888888999988643


Q ss_pred             --ce--eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCC
Q psy7482         217 --SH--LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAG  290 (327)
Q Consensus       217 --~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg  290 (327)
                        ..  -.++......+..+.+.  ||++.+|+++.|+.|++|..++.+++..++-|.+.|++++|+|  .++|+++.|+
T Consensus       238 ~gslq~~~e~~lknpGv~gvrIR--pD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~  315 (323)
T KOG0322|consen  238 TGSLQIRKEITLKNPGVSGVRIR--PDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDA  315 (323)
T ss_pred             cCcccccceEEecCCCccceEEc--cCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCc
Confidence              21  12222333457778885  9999999999999999999999999999999999999999999  8999999999


Q ss_pred             cEEEEEc
Q psy7482         291 DLVVWEL  297 (327)
Q Consensus       291 ~v~iw~~  297 (327)
                      +|.+|++
T Consensus       316 rISLWkL  322 (323)
T KOG0322|consen  316 RISLWKL  322 (323)
T ss_pred             eEEeeec
Confidence            9999986

>KOG0270|consensus

Probab=99.94  E-value=7.5e-25  Score=171.15  Aligned_cols=236  Identities=14%  Similarity=0.241  Sum_probs=184.2

Q ss_pred             EEEEECC-------CCCeEEEecCCCcEEEEEcCCCeEE---EeE-----------------EecccCCceeeEEEecC-
Q psy7482          58 TCLKFTP-------EGSHLISCSDDGSIAIFRVGSWQLE---KLF-----------------KKAHKGTAVNHISIHPS-  109 (327)
Q Consensus        58 ~~~~~~~-------~~~~l~~~~~d~~i~iw~~~~~~~~---~~~-----------------~~~~~~~~v~~~~~~~~-  109 (327)
                      .|++|..       .|+++|.|+.|..|.|||+.-...+   ..+                 ..+|... |..++|+.. 
T Consensus       177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTda-vl~Ls~n~~~  255 (463)
T KOG0270|consen  177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDA-VLALSWNRNF  255 (463)
T ss_pred             hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHH-HHHHHhcccc
Confidence            5666643       3679999999999999998521110   011                 1246666 788888874 


Q ss_pred             CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecC-CceeeEecCCC
Q psy7482         110 GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEK-AGVLQTLKSES  186 (327)
Q Consensus       110 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~-~~~~~~~~~~~  186 (327)
                      .+.|++|+.|.+|++||+.++++...+..+     ...|.++.|+|.. .+|++|+ |+++.+.|.+. ...-..++..+
T Consensus       256 ~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~-----~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g  330 (463)
T KOG0270|consen  256 RNVLASGSADKTVKLWDVDTGKPKSSITHH-----GKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDG  330 (463)
T ss_pred             ceeEEecCCCceEEEEEcCCCCcceehhhc-----CCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEecc
Confidence            568999999999999999999998776633     3459999999965 6777777 99999999984 33344566788


Q ss_pred             ceeEEEeecC--ceEEEeCCCCcEEEEEcCCC-ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce-
Q psy7482         187 KVHSVCFLNE--TTVCTGNEESAITAYNLTDG-SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH-  262 (327)
Q Consensus       187 ~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~-  262 (327)
                      .|..++|.|.  ..++++..||+++-+|+++. +++.+++.|.++|.+++++. ....++++++.|+.+++|++....+ 
T Consensus       331 ~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~-~~p~~l~t~s~d~~Vklw~~~~~~~~  409 (463)
T KOG0270|consen  331 EVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNI-QTPGLLSTASTDKVVKLWKFDVDSPK  409 (463)
T ss_pred             ceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecC-CCCcceeeccccceEEEEeecCCCCc
Confidence            9999999997  67889999999999999876 88999999999999999974 6677899999999999999875443 


Q ss_pred             -eEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCc
Q psy7482         263 -LWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       263 -~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~  300 (327)
                       +..-.-.-+...|.++.|   -.++.|+..+.++|||+...
T Consensus       410 ~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~  451 (463)
T KOG0270|consen  410 SVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTN  451 (463)
T ss_pred             ccccccccccceeecccCCCcceEEEecCccceEEEeecccC
Confidence             221111123466677777   78888999999999999887

>KOG4378|consensus

Probab=99.94  E-value=8e-25  Score=173.55  Aligned_cols=261  Identities=11%  Similarity=0.193  Sum_probs=203.4

Q ss_pred             cEEEEEe-CCCEEEEe--cCCCeEEEEEcccc--ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482          16 SVRSVAA-TSKLAASS--GADETVVLYDMVKR--KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        16 ~v~~~~~-~~~~l~~~--~~dg~v~~w~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      .+.++.| ..++|+++  +.|..+++|.-...  +....-+.....-.|++......++++|+..+.|+|||++...+.+
T Consensus        36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr  115 (673)
T KOG4378|consen   36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHR  115 (673)
T ss_pred             cceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhcceeeeccCcCceeeehhhHHHHHhh
Confidence            4888899 44445544  56788999974322  1111111111233455555556899999999999999999555555


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe-ec-CCeE
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI-PI-QNKA  168 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~-~~~i  168 (327)
                      .+ +.|... |+++.++....+|++++..|.|.+..+.++.....+.....    ..++-+.|+|..+.+++ ++ +|.|
T Consensus       116 ~l-kdh~st-vt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sg----qsvRll~ys~skr~lL~~asd~G~V  189 (673)
T KOG4378|consen  116 FL-KDHQST-VTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSG----QSVRLLRYSPSKRFLLSIASDKGAV  189 (673)
T ss_pred             hc-cCCcce-eEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCC----CeEEEeecccccceeeEeeccCCeE
Confidence            55 899987 99999999999999999999999999998876655554432    23778999998775544 44 8999


Q ss_pred             EEEEecCCceeeEec--CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEE
Q psy7482         169 VVFSVEKAGVLQTLK--SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVC  244 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~--~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~  244 (327)
                      .+||+....++..+.  |..+...++|+|.  .++++.+.|..|.+||.+..+....+. ...+...++|.  ++|.+|+
T Consensus       190 tlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~--~~G~~L~  266 (673)
T KOG4378|consen  190 TLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFS--ECGTYLC  266 (673)
T ss_pred             EEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeec--CCceEEE
Confidence            999999888887776  8999999999996  678899999999999998776666554 55689999995  9999999


Q ss_pred             EecCCCeEEEEEcCCCc-eeEEeecccCceEEEeeeC-cEEEE
Q psy7482         245 TGNEESAITAYNLTDGS-HLWHIKASASRIKGLASHR-NHLIC  285 (327)
Q Consensus       245 ~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~-~~l~~  285 (327)
                      +|+..|.|..||++..+ ++..+..|...|++++|-+ ..+++
T Consensus       267 aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~tvlt  309 (673)
T KOG4378|consen  267 AGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSPTVLT  309 (673)
T ss_pred             eecCCceEEEEecccCCCCceEeeecccceeEEEeeecceeee
Confidence            99999999999998655 8899999999999999988 44443

>KOG0321|consensus

Probab=99.94  E-value=7e-25  Score=178.61  Aligned_cols=250  Identities=14%  Similarity=0.227  Sum_probs=182.0

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccc--cccccccEEEEEECCC-CCeEEEecCCCcEEEEEc
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGA--LMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~--~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~   83 (327)
                      ....|...|..+.|  ....|++++.|.++++||+++.++...  +.+|...|.+++|.|. ...|++|+.||.|.|||+
T Consensus        95 ~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~  174 (720)
T KOG0321|consen   95 KPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDC  174 (720)
T ss_pred             ccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEE
Confidence            34579999999999  566788999999999999999988877  8899999999999995 557889999999999998


Q ss_pred             CCCe--------------------EEEeE------EecccCCceee---EEEecCCCEEEEEeC-CCCEEEEEcCCCcee
Q psy7482          84 GSWQ--------------------LEKLF------KKAHKGTAVNH---ISIHPSGKLALSVGK-DKTLRTWNLVKGRSA  133 (327)
Q Consensus        84 ~~~~--------------------~~~~~------~~~~~~~~v~~---~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~  133 (327)
                      +-..                    ....+      ...+... |.+   +.+..|...|++++. |+.|++||++.....
T Consensus       175 R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~t-i~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~  253 (720)
T KOG0321|consen  175 RCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNT-IFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTA  253 (720)
T ss_pred             eccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCc-eeeeeEEEEEeccceeeeccCCCcceEEEeecccccc
Confidence            5321                    00000      0122222 444   555668888999887 999999999875433


Q ss_pred             ee------eeccccCccccceEEEEEccCCcEE-EeecCCeEEEEEecCCce--eeEecC---CCceeEEEeecC-ceEE
Q psy7482         134 YI------TNLSSYGVGFENLDSVVWSPEGLLY-AIPIQNKAVVFSVEKAGV--LQTLKS---ESKVHSVCFLNE-TTVC  200 (327)
Q Consensus       134 ~~------~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~i~i~d~~~~~~--~~~~~~---~~~i~~~~~~~~-~~l~  200 (327)
                      ..      ..++........+.++.....|.+| |.+.|+.|+.|++.+...  +..+.+   ......-..+|+ .+++
T Consensus       254 ~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~  333 (720)
T KOG0321|consen  254 YRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLL  333 (720)
T ss_pred             cccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEe
Confidence            22      1222221122347777777777655 555699999999987543  233321   112223345677 7899


Q ss_pred             EeCCCCcEEEEEcCCCce-eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482         201 TGNEESAITAYNLTDGSH-LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       201 ~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                      +|+.|...++|.+.+.+. ...+.+|...|++++|.+++....+. +++|..+++|++.++
T Consensus       334 SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~T-cSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  334 SGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVAT-CSDDFRVKIWRLSNG  393 (720)
T ss_pred             ccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCcee-eccCcceEEEeccCc
Confidence            999999999999987654 55678999999999999866666555 499999999998664

>KOG1034|consensus

Probab=99.94  E-value=5.7e-24  Score=160.34  Aligned_cols=290  Identities=19%  Similarity=0.265  Sum_probs=217.5

Q ss_pred             eeEEEeeeeccCCccEEEEEe-------CCCEEEEecCCCeEEEEEccccc---cccccc--cccccEEEEEECCC----
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA-------TSKLAASSGADETVVLYDMVKRK---QSGALM--QHEGTITCLKFTPE----   65 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~-------~~~~l~~~~~dg~v~~w~~~~~~---~~~~~~--~~~~~v~~~~~~~~----   65 (327)
                      |++...++ .+|..+|..++|       ..+.+|++|. ..+.+|+....-   .++.+.  .|.+....++|+-+    
T Consensus        27 yk~t~~l~-ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~  104 (385)
T KOG1034|consen   27 YKYTNHLK-EDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTG  104 (385)
T ss_pred             eEeeeehh-ccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCC
Confidence            34444444 478899999999       3456777774 568888875432   233332  36777888888764    


Q ss_pred             CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc
Q psy7482          66 GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG  144 (327)
Q Consensus        66 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  144 (327)
                      ..++|.|+.-|.|+|.|+.+++....+ .+|... |+.+.++|+ .+++++++.|..|++|++++..++..+  .+...|
T Consensus       105 ~p~la~~G~~GvIrVid~~~~~~~~~~-~ghG~s-INeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~Vf--GG~egH  180 (385)
T KOG1034|consen  105 NPFLAAGGYLGVIRVIDVVSGQCSKNY-RGHGGS-INEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVF--GGVEGH  180 (385)
T ss_pred             CeeEEeecceeEEEEEecchhhhccce-eccCcc-chhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEe--cccccc
Confidence            347999999999999999999999999 899988 999999994 579999999999999999999887664  445567


Q ss_pred             ccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-----------------------------CCCceeEEEee
Q psy7482         145 FENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-----------------------------SESKVHSVCFL  194 (327)
Q Consensus       145 ~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-----------------------------~~~~i~~~~~~  194 (327)
                      .+.|.++.|++++.++++++ |.++++|++...+....++                             |...|.|+.|-
T Consensus       181 rdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~  260 (385)
T KOG1034|consen  181 RDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF  260 (385)
T ss_pred             cCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH
Confidence            78899999999999999987 9999999998432211110                             33344444443


Q ss_pred             cCceEEEeCCCCcEEEEEc-CCCc-------------eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482         195 NETTVCTGNEESAITAYNL-TDGS-------------HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       195 ~~~~l~~~~~d~~i~i~d~-~~~~-------------~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                      - +++++-+.++.|..|.. +-.+             .+.+++-....+.-+.|.-+|-++.|+.|...|.+++||+++.
T Consensus       261 g-d~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~  339 (385)
T KOG1034|consen  261 G-DFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNN  339 (385)
T ss_pred             h-hheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCC
Confidence            3 47788888999999986 2111             2334445556677777766688999999999999999999987


Q ss_pred             cee--EEee--cccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         261 SHL--WHIK--ASASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       261 ~~~--~~~~--~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      ++.  .++.  .....|+..+|+.  ..|+...+|++|.-||.-
T Consensus       340 ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  340 EPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             CCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence            753  1222  1235788999998  889999999999999854

>KOG0307|consensus

Probab=99.94  E-value=6.3e-26  Score=196.07  Aligned_cols=264  Identities=16%  Similarity=0.269  Sum_probs=207.8

Q ss_pred             cCCCeEEEEEcccc--c----cccccccccccEEEEEECCCCCe----EEEecCCCcEEEEEcCC---C---eEEEeEEe
Q psy7482          31 GADETVVLYDMVKR--K----QSGALMQHEGTITCLKFTPEGSH----LISCSDDGSIAIFRVGS---W---QLEKLFKK   94 (327)
Q Consensus        31 ~~dg~v~~w~~~~~--~----~~~~~~~~~~~v~~~~~~~~~~~----l~~~~~d~~i~iw~~~~---~---~~~~~~~~   94 (327)
                      +.+.++-||.+...  +    .+..+. -...-+.++|.+.+..    |+.|..||.|.+||...   +   ..+... .
T Consensus        36 st~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~-~  113 (1049)
T KOG0307|consen   36 STSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATK-S  113 (1049)
T ss_pred             ccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhh-c
Confidence            34556667755432  2    333333 3456889999997665    88999999999999865   2   223344 6


Q ss_pred             cccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-EEEeec-CCeEEEE
Q psy7482          95 AHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-LYAIPI-QNKAVVF  171 (327)
Q Consensus        95 ~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~~~i~i~  171 (327)
                      .|.+. |..+.|++. +++|++|+.||.|.|||+.+.+......   .....+.|.+++|+..-+ .|++++ +|.+.||
T Consensus       114 ~h~G~-V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~---~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iW  189 (1049)
T KOG0307|consen  114 KHTGP-VLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG---SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIW  189 (1049)
T ss_pred             ccCCc-eeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC---CCCCcccceEeccchhhhHHhhccCCCCCceec
Confidence            77887 999999995 5599999999999999998755433332   111234599999998654 566666 7899999


Q ss_pred             EecCCceeeEecC---CCceeEEEeecC--ceEEEeCCCC---cEEEEEcCCC-ceeEEeeecccceEEEEEEecCCCcE
Q psy7482         172 SVEKAGVLQTLKS---ESKVHSVCFLNE--TTVCTGNEES---AITAYNLTDG-SHLWQIKASASRIKGLVFFSIPQETT  242 (327)
Q Consensus       172 d~~~~~~~~~~~~---~~~i~~~~~~~~--~~l~~~~~d~---~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~s~~~~~  242 (327)
                      |++..+.+-.+..   ...+..++|+|+  ..+++++.|.   .|.+||++.. .+++.+++|...|.++.|++ .|.++
T Consensus       190 Dlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~-~D~~l  268 (1049)
T KOG0307|consen  190 DLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCP-QDPRL  268 (1049)
T ss_pred             cccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCC-CCchh
Confidence            9999988877772   234789999998  6677776554   5899998864 46788899999999999985 66799


Q ss_pred             EEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCcc
Q psy7482         243 VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       243 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      |++++.|+.|.+|+.++++.+..+....+.+..+.|.|   ..+++++-||.|.|+.+....
T Consensus       269 llSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  269 LLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             hhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            99999999999999999999999999888999999999   799999999999999998764

>KOG0650|consensus

Probab=99.93  E-value=4.1e-24  Score=173.09  Aligned_cols=273  Identities=14%  Similarity=0.220  Sum_probs=204.9

Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC-EEEEEeCCCCEEEEE
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWN  126 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd  126 (327)
                      ..+.+|++.|.++...|.|.+|++|+.||+|+||.+.+|.++.++...  +. |.+++|+|.+. .++++..++.+.+.+
T Consensus       394 lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d--~~-I~~vaw~P~~~~~vLAvA~~~~~~ivn  470 (733)
T KOG0650|consen  394 LVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD--SE-IRSVAWNPLSDLCVLAVAVGECVLIVN  470 (733)
T ss_pred             eeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec--ce-eEEEEecCCCCceeEEEEecCceEEeC
Confidence            456789999999999999999999999999999999999999988322  23 99999999654 233333334455555


Q ss_pred             cCCCceeee---------e-------------ecc----------ccCccccceEEEEEccCCcEEEeec----CCeEEE
Q psy7482         127 LVKGRSAYI---------T-------------NLS----------SYGVGFENLDSVVWSPEGLLYAIPI----QNKAVV  170 (327)
Q Consensus       127 ~~~~~~~~~---------~-------------~~~----------~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i  170 (327)
                      ..-|..+..         .             .-.          ..-.+..+|..+.|+..|.+|++..    ...|.|
T Consensus       471 p~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~Vli  550 (733)
T KOG0650|consen  471 PIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLI  550 (733)
T ss_pred             ccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEE
Confidence            433311000         0             000          0011234589999999999999874    357999


Q ss_pred             EEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecC
Q psy7482         171 FSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNE  248 (327)
Q Consensus       171 ~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~  248 (327)
                      +++...+....|. ..+.+.++.|+|. .+|++++ ...|++||+.....++++......|..++.+  |.|..|+.|+.
T Consensus       551 HQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqelvKkL~tg~kwiS~msih--p~GDnli~gs~  627 (733)
T KOG0650|consen  551 HQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVAT-QRSVRIYDLSKQELVKKLLTGSKWISSMSIH--PNGDNLILGSY  627 (733)
T ss_pred             EecccccccCchhhcCCceeEEEecCCCceEEEEe-ccceEEEehhHHHHHHHHhcCCeeeeeeeec--CCCCeEEEecC
Confidence            9998887777775 7788999999998 6666655 4679999999888888887778889999996  89999999999


Q ss_pred             CCeEEEEEcCCC-ceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccC--ccCC--CceeeeecC-CC----Cc
Q psy7482         249 ESAITAYNLTDG-SHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNE--DVTR--EPQRVSATN-DG----CR  316 (327)
Q Consensus       249 d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~--~~~~--~~~~~~~~~-~~----~~  316 (327)
                      |+.+..||+.-. ++..++..|...+++++|++  .++++|+.||++.|+.-.-  ...+  ...++.... |.    ..
T Consensus       628 d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~g  707 (733)
T KOG0650|consen  628 DKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLG  707 (733)
T ss_pred             CCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccc
Confidence            999999999855 57788899999999999999  9999999999999985321  1111  223333322 22    23


Q ss_pred             eEEEEeCCCC
Q psy7482         317 FTCLAIRPPV  326 (327)
Q Consensus       317 i~~l~~~p~~  326 (327)
                      |....|||..
T Consensus       708 VLd~~wHP~q  717 (733)
T KOG0650|consen  708 VLDTIWHPRQ  717 (733)
T ss_pred             eEeecccCCC
Confidence            7788899964

>KOG1188|consensus

Probab=99.93  E-value=2.4e-24  Score=163.16  Aligned_cols=272  Identities=15%  Similarity=0.195  Sum_probs=199.3

Q ss_pred             CEEEEecCCCeEEEEEccccccccccccccccEEEEEECC--CCCeEEEecCCCcEEEEEcCCCeEEEeEE-ecccCCce
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRVGSWQLEKLFK-KAHKGTAV  101 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~~~v  101 (327)
                      ..+|++.+.|.|++||..+++.+..++++...++.++|..  ....+.+|+.||+|++||++.......+. ..+.+.+.
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f  120 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF  120 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence            5688889999999999999999999999999999999987  45678999999999999998876655542 33443457


Q ss_pred             eeEEEecCCCEEEEEeC----CCCEEEEEcCCCcee-eeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEec
Q psy7482         102 NHISIHPSGKLALSVGK----DKTLRTWNLVKGRSA-YITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVE  174 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~  174 (327)
                      .+++.+-.++.+++|..    +-.+.+||++..+.. ..+ .   ..|.+.|+++.|+|+. ++|++|+ ||-+.+||++
T Consensus       121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~-~---eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~  196 (376)
T KOG1188|consen  121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQL-N---ESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK  196 (376)
T ss_pred             eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhh-h---hhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence            77777667777887753    678999999987663 222 1   3345679999999965 6888888 9999999997


Q ss_pred             CCc----eeeEecCCCceeEEEeecCc--eEEEeCCCCcEEEEEcCCCceeEEeeeccc----------ceEEEEEEecC
Q psy7482         175 KAG----VLQTLKSESKVHSVCFLNET--TVCTGNEESAITAYNLTDGSHLWQIKASAS----------RIKGLVFFSIP  238 (327)
Q Consensus       175 ~~~----~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----------~v~~~~~~~s~  238 (327)
                      ...    .+..+.+...|.++.|..++  .+.+-+......+|+++.+.+...+....-          --+-+..+...
T Consensus       197 ~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~  276 (376)
T KOG1188|consen  197 KDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPG  276 (376)
T ss_pred             CCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCC
Confidence            653    34556688889999999874  899999999999999998875444322100          00111111013


Q ss_pred             CCcEEEEecC-CCeEEEEEcC---C---CceeEEeec-ccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         239 QETTVCTGNE-ESAITAYNLT---D---GSHLWHIKA-SASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       239 ~~~~l~~~~~-d~~i~i~d~~---~---~~~~~~~~~-~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++...+.++. -+...++-+.   +   .+.+..+.+ |...|+++.|..  .++.||++||.+.+|..+..
T Consensus       277 ~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~da  348 (376)
T KOG1188|consen  277 DKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVEDA  348 (376)
T ss_pred             CcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecCCc
Confidence            4445554444 4555555433   2   335566666 667888888887  99999999999999996443

>KOG2919|consensus

Probab=99.93  E-value=1.2e-23  Score=158.39  Aligned_cols=269  Identities=13%  Similarity=0.211  Sum_probs=203.9

Q ss_pred             EEEe--CCCEEEEecCCCeEEEEEccccc------------cccccc-cccccEEEEEEC-------CCCCeEEEecCCC
Q psy7482          19 SVAA--TSKLAASSGADETVVLYDMVKRK------------QSGALM-QHEGTITCLKFT-------PEGSHLISCSDDG   76 (327)
Q Consensus        19 ~~~~--~~~~l~~~~~dg~v~~w~~~~~~------------~~~~~~-~~~~~v~~~~~~-------~~~~~l~~~~~d~   76 (327)
                      .+.|  ||.-|++-+.|..+++|++...-            ...+++ .....|...+|-       |+..++++.+.+.
T Consensus        54 gckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~  133 (406)
T KOG2919|consen   54 GCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQ  133 (406)
T ss_pred             cceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccC
Confidence            4455  99999999999999999976321            001111 123557777775       5677899999999


Q ss_pred             cEEEEEcCCCeEEEeEEec--ccCC--ceeeEEEecCCCEEEEEeCCCCEEEEEc-CCCceeeeee--ccccCccccceE
Q psy7482          77 SIAIFRVGSWQLEKLFKKA--HKGT--AVNHISIHPSGKLALSVGKDKTLRTWNL-VKGRSAYITN--LSSYGVGFENLD  149 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~--~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~~--~~~~~~~~~~v~  149 (327)
                      -|++||.-+|+....+ .+  |.+.  ...+++|+|||.+|++|. ...|++||+ +.|+.-....  ........+-+.
T Consensus       134 PIh~wdaftG~lraSy-~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~giis  211 (406)
T KOG2919|consen  134 PIHLWDAFTGKLRASY-RAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIIS  211 (406)
T ss_pred             ceeeeeccccccccch-hhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccceee
Confidence            9999999999887776 22  2111  257899999999998764 589999999 5554322221  121122234488


Q ss_pred             EEEEccCC-cEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeC-CCCcEEEEEcCCC-ceeEEee
Q psy7482         150 SVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGN-EESAITAYNLTDG-SHLWQIK  223 (327)
Q Consensus       150 ~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~~~~-~~~~~~~  223 (327)
                      +++|+|-. ..+++++ ...+-||.-..+.++..+. |.+.|+.++|.++ +.|++|. .+..|..||++.. .++..+.
T Consensus       212 c~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~  291 (406)
T KOG2919|consen  212 CFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALE  291 (406)
T ss_pred             eeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhh
Confidence            99999955 5888887 7788888888888888887 8999999999999 7777776 5788999999864 4566777


Q ss_pred             eccc-ceEEEEEEecCCCcEEEEecCCCeEEEEEcCC-CceeEEeecccCceEEEeeeC--cEEEEEecC
Q psy7482         224 ASAS-RIKGLVFFSIPQETTVCTGNEESAITAYNLTD-GSHLWHIKASASRIKGLASHR--NHLICITSA  289 (327)
Q Consensus       224 ~~~~-~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d  289 (327)
                      .|.. .-..|.|...|++++|++|+.||.|++||++. +..+..+..+...++.++++|  .++++++..
T Consensus       292 rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  292 RHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             hhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence            6765 44456665569999999999999999999998 777888889999999999999  777777644

>KOG1034|consensus

Probab=99.93  E-value=5.5e-24  Score=160.42  Aligned_cols=251  Identities=18%  Similarity=0.281  Sum_probs=187.3

Q ss_pred             eEEEeeeeccCCccEEEEEe-----C-CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCC-CCeEEEecCC
Q psy7482           3 TLTQTFVTHSHTASVRSVAA-----T-SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-GSHLISCSDD   75 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~-----~-~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d   75 (327)
                      .+.|.+.-..|...-..++|     + ..++|.||.-|.|+|.|+.+++....+.+|...|+.+.+.|+ .+++++++.|
T Consensus        78 r~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD  157 (385)
T KOG1034|consen   78 RLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKD  157 (385)
T ss_pred             eeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCC
Confidence            35566665668888888888     2 568999999999999999999999999999999999999995 4688999999


Q ss_pred             CcEEEEEcCCCeEEEeEE--ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeee----------------
Q psy7482          76 GSIAIFRVGSWQLEKLFK--KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN----------------  137 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----------------  137 (327)
                      ..|++|++++..++..+.  .+|.+. |.++.|++++.++++++.|.+|++|++...+....+.                
T Consensus       158 ~svRlwnI~~~~Cv~VfGG~egHrde-VLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt  236 (385)
T KOG1034|consen  158 HSVRLWNIQTDVCVAVFGGVEGHRDE-VLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPT  236 (385)
T ss_pred             ceEEEEeccCCeEEEEecccccccCc-EEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCc
Confidence            999999999999988872  567777 9999999999999999999999999998432211110                


Q ss_pred             ----cc---ccCccccceEEEEEccCCcEEEeec-CCeEEEEEe-cCCce-------------eeEec-CCCceeEEEee
Q psy7482         138 ----LS---SYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSV-EKAGV-------------LQTLK-SESKVHSVCFL  194 (327)
Q Consensus       138 ----~~---~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~-~~~~~-------------~~~~~-~~~~i~~~~~~  194 (327)
                          ++   ....|...|-|+.|-  |.++++-+ ++.|..|.. +-++.             +..++ ....|.-+.|.
T Consensus       237 ~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~  314 (385)
T KOG1034|consen  237 PKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFA  314 (385)
T ss_pred             cccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEe
Confidence                00   112233344444444  45666655 889999987 22222             12222 23344445554


Q ss_pred             cC---ceEEEeCCCCcEEEEEcCCCceeE--Eee--ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         195 NE---TTVCTGNEESAITAYNLTDGSHLW--QIK--ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       195 ~~---~~l~~~~~d~~i~i~d~~~~~~~~--~~~--~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                      -|   ..|+.|...|.+.+||+++.++..  ++.  .....|...+|+  .++..|+...+|+.|.-||..
T Consensus       315 ~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS--~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  315 FDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFS--RDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             ecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeec--ccCcEEEEEeCCCcEEEEEee
Confidence            44   789999999999999999876631  221  223468888994  899999999999999999853

>KOG0642|consensus

Probab=99.93  E-value=1.3e-24  Score=174.79  Aligned_cols=257  Identities=18%  Similarity=0.239  Sum_probs=199.9

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccc--------cccccccccccccEEEEEECCCCCeEEEecCC
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVK--------RKQSGALMQHEGTITCLKFTPEGSHLISCSDD   75 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d   75 (327)
                      ..|.+..|.+.|++++|  ....|++++.||++++|+++.        -+++.++.+|.++|.|++..++++.+++|+.|
T Consensus       286 ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~D  365 (577)
T KOG0642|consen  286 IKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGID  365 (577)
T ss_pred             eeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccC
Confidence            34566689999999999  778999999999999999942        25678899999999999999999999999999


Q ss_pred             CcEEEEEcCCC----------eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc
Q psy7482          76 GSIAIFRVGSW----------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF  145 (327)
Q Consensus        76 ~~i~iw~~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  145 (327)
                      |+|+.|++...          .....+ .+|.+. |+.+++++....|++++.||+++.|+...... ..+..+..   .
T Consensus       366 g~I~~w~~p~n~dp~ds~dp~vl~~~l-~Ghtda-vw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e---~  439 (577)
T KOG0642|consen  366 GTIRCWNLPPNQDPDDSYDPSVLSGTL-LGHTDA-VWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKE---H  439 (577)
T ss_pred             ceeeeeccCCCCCcccccCcchhccce-eccccc-eeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccc---c
Confidence            99999966421          233455 899998 99999999888999999999999999876554 22222222   1


Q ss_pred             cceEEEEEccCCcEEEee--cCCeEEEEEecCCceeeEecC--------CCceeEEEeecC-ceEEEeCCCCcEEEEEcC
Q psy7482         146 ENLDSVVWSPEGLLYAIP--IQNKAVVFSVEKAGVLQTLKS--------ESKVHSVCFLNE-TTVCTGNEESAITAYNLT  214 (327)
Q Consensus       146 ~~v~~~~~~~~~~~l~~~--~~~~i~i~d~~~~~~~~~~~~--------~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~  214 (327)
                      ....++.+-........+  .-+.-.+++......+..+..        ...+..+.++|. .+.+++..|+.|+++|..
T Consensus       440 g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~  519 (577)
T KOG0642|consen  440 GYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNK  519 (577)
T ss_pred             CCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccc
Confidence            224555554333112222  234444555555554444441        235677788887 899999999999999999


Q ss_pred             CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         215 DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      ++++++....|...++++++.  |+|.+|++++.|+.+++|.+....++.....|.
T Consensus       520 ~~~~l~s~~a~~~svtslai~--~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r  573 (577)
T KOG0642|consen  520 TGKILHSMVAHKDSVTSLAID--PNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHR  573 (577)
T ss_pred             ccccchheeeccceecceeec--CCCceEEeecCCceeehhhccchheeecccccc
Confidence            999999999999999999995  999999999999999999998888777666664

>KOG0307|consensus

Probab=99.93  E-value=6e-25  Score=190.09  Aligned_cols=243  Identities=16%  Similarity=0.233  Sum_probs=194.2

Q ss_pred             CccEEEEEe--CCC----EEEEecCCCeEEEEEcccc------ccccccccccccEEEEEECCCC-CeEEEecCCCcEEE
Q psy7482          14 TASVRSVAA--TSK----LAASSGADETVVLYDMVKR------KQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAI   80 (327)
Q Consensus        14 ~~~v~~~~~--~~~----~l~~~~~dg~v~~w~~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i   80 (327)
                      ..+-..++|  .+.    +||.|..||.|.+||...-      ..+.+...|++.|..+.|++.+ +.||+|+.||.|.|
T Consensus        64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i  143 (1049)
T KOG0307|consen   64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI  143 (1049)
T ss_pred             cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence            456778888  232    5899999999999997652      3456677899999999999965 49999999999999


Q ss_pred             EEcCCCeEEEeEE-ecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-
Q psy7482          81 FRVGSWQLEKLFK-KAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-  157 (327)
Q Consensus        81 w~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-  157 (327)
                      ||+...+...... ....+. |.+++|+. ..+.|++++.+|.+.|||++..+.+..+......   ..+..++|+|++ 
T Consensus       144 WDlnn~~tP~~~~~~~~~~e-I~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~---~~~S~l~WhP~~a  219 (1049)
T KOG0307|consen  144 WDLNKPETPFTPGSQAPPSE-IKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGR---MHCSVLAWHPDHA  219 (1049)
T ss_pred             eccCCcCCCCCCCCCCCccc-ceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCc---cceeeeeeCCCCc
Confidence            9998755444431 123344 99999997 4567899999999999999988765554444332   338899999987 


Q ss_pred             cEEEeec--C--CeEEEEEecCC-ceeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecccce
Q psy7482         158 LLYAIPI--Q--NKAVVFSVEKA-GVLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASASRI  229 (327)
Q Consensus       158 ~~l~~~~--~--~~i~i~d~~~~-~~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v  229 (327)
                      ..+++++  |  -.|.+||++.- .+++.+. |...|.++.|++.  .++++++.|+.|.+|+.++++.+.++......+
T Consensus       220 Tql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~  299 (1049)
T KOG0307|consen  220 TQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWC  299 (1049)
T ss_pred             eeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcce
Confidence            3455544  3  47999998864 4666775 8999999999985  789999999999999999999999999888899


Q ss_pred             EEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         230 KGLVFFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      ..+.|++ .+...+++++-||.|.||.+....
T Consensus       300 fdv~w~p-r~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  300 FDVQWCP-RNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             eeeeecC-CCcchhhhheeccceeeeeeecCC
Confidence            9999985 566789999999999999987654

>KOG4328|consensus

Probab=99.92  E-value=2.2e-23  Score=163.66  Aligned_cols=253  Identities=17%  Similarity=0.181  Sum_probs=190.1

Q ss_pred             EccccccccccccccccEEEEEECCCC--CeEEEecCCCcEEEEEcCCCe----EEEeEEecccCCceeeEEEec-CCCE
Q psy7482          40 DMVKRKQSGALMQHEGTITCLKFTPEG--SHLISCSDDGSIAIFRVGSWQ----LEKLFKKAHKGTAVNHISIHP-SGKL  112 (327)
Q Consensus        40 ~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~  112 (327)
                      |+.+-.....++-+.+.|++++|+|..  +++++|...|+|-+||+.+.+    -+..+ ..|... |.++.|+| +...
T Consensus       172 ~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f-~~hs~~-Vs~l~F~P~n~s~  249 (498)
T KOG4328|consen  172 DLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLF-TPHSGP-VSGLKFSPANTSQ  249 (498)
T ss_pred             ccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEe-ccCCcc-ccceEecCCChhh
Confidence            344444555666788999999999954  578899999999999995221    22333 666666 99999999 5678


Q ss_pred             EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce-eeEec-CCCcee
Q psy7482         113 ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV-LQTLK-SESKVH  189 (327)
Q Consensus       113 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~-~~~~~-~~~~i~  189 (327)
                      +++.+.||+|++-|++.......+.....   ...+.++.|+.+...++.+. =|.+.+||.++++. ...+. |...|.
T Consensus       250 i~ssSyDGtiR~~D~~~~i~e~v~s~~~d---~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~  326 (498)
T KOG4328|consen  250 IYSSSYDGTIRLQDFEGNISEEVLSLDTD---NIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKIT  326 (498)
T ss_pred             eeeeccCceeeeeeecchhhHHHhhcCcc---ceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccc
Confidence            99999999999999987655444433222   23377888888776666665 56999999998765 44444 778999


Q ss_pred             EEEeecC--ceEEEeCCCCcEEEEEcCCCcee----EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC----C
Q psy7482         190 SVCFLNE--TTVCTGNEESAITAYNLTDGSHL----WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT----D  259 (327)
Q Consensus       190 ~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~----~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~----~  259 (327)
                      +++++|-  .++++++.|++.+|||++.....    ...-.|...|.+..|+  |.+..|++.+.|..|+|||..    .
T Consensus       327 sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFS--Ps~gtl~TT~~D~~IRv~dss~~sa~  404 (498)
T KOG4328|consen  327 SVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFS--PSGGTLLTTCQDNEIRVFDSSCISAK  404 (498)
T ss_pred             eeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEc--CCCCceEeeccCCceEEeeccccccc
Confidence            9999996  78999999999999999864332    2334688999999995  777779999999999999983    3


Q ss_pred             CceeEEeecccC------ceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         260 GSHLWHIKASAS------RIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       260 ~~~~~~~~~~~~------~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      -.+..++. |+.      ......|.|  .++++|-.-..|-|+|-..+
T Consensus       405 ~~p~~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~  452 (498)
T KOG4328|consen  405 DEPLGTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGG  452 (498)
T ss_pred             CCccceee-ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCC
Confidence            33344443 321      233456888  88999988888999998887

>KOG1009|consensus

Probab=99.92  E-value=1.9e-22  Score=156.15  Aligned_cols=279  Identities=16%  Similarity=0.300  Sum_probs=200.1

Q ss_pred             CccEEEEEe---CCCEEEEecCCCeEEEEEcccccc---------ccccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482          14 TASVRSVAA---TSKLAASSGADETVVLYDMVKRKQ---------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF   81 (327)
Q Consensus        14 ~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw   81 (327)
                      ..+|..+.|   ..+.+|||+.|..|++|.+..+..         ...+..|...|+++.|+|+|+.||+|+.+|.|.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            467899999   444899999999999998865432         34567899999999999999999999999999999


Q ss_pred             EcC--------C--------CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc
Q psy7482          82 RVG--------S--------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF  145 (327)
Q Consensus        82 ~~~--------~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  145 (327)
                      ...        +        ....+.+ .+|... |..++|+|++.++++++.|..+++||+..|+.......+.     
T Consensus        93 k~~~~~~~~~d~e~~~~ke~w~v~k~l-r~h~~d-iydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~-----  165 (434)
T KOG1009|consen   93 KQGDVRIFDADTEADLNKEKWVVKKVL-RGHRDD-IYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHE-----  165 (434)
T ss_pred             EecCcCCccccchhhhCccceEEEEEe-cccccc-hhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccc-----
Confidence            765        2        1223333 667777 9999999999999999999999999999998866554443     


Q ss_pred             cceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec--------------------C----CCceeEEEeecC-ceE
Q psy7482         146 ENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK--------------------S----ESKVHSVCFLNE-TTV  199 (327)
Q Consensus       146 ~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--------------------~----~~~i~~~~~~~~-~~l  199 (327)
                      ..+..++|.|-++++++-+ |...+.+.+...+.+....                    |    ..-...++|+|+ .++
T Consensus       166 ~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~ll  245 (434)
T KOG1009|consen  166 HYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLL  245 (434)
T ss_pred             cccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEE
Confidence            3489999999999888865 6666666654433322211                    1    123456788898 445


Q ss_pred             EEeC----CC-----CcEEEEEcCCC-ceeEEeeecccceEEEEEEe----------------cCCCcEEEEecCCCeEE
Q psy7482         200 CTGN----EE-----SAITAYNLTDG-SHLWQIKASASRIKGLVFFS----------------IPQETTVCTGNEESAIT  253 (327)
Q Consensus       200 ~~~~----~d-----~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~----------------s~~~~~l~~~~~d~~i~  253 (327)
                      ++..    ..     +..++|+-+.. ++...+.....+...+.|++                -|-+..+|.++ ...++
T Consensus       246 vtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svy  324 (434)
T KOG1009|consen  246 VTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVY  324 (434)
T ss_pred             EcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEE
Confidence            5432    12     23355553322 23444444444444444432                13344455555 46899


Q ss_pred             EEEcCCCceeEEee-cccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         254 AYNLTDGSHLWHIK-ASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       254 i~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +||.++..++.... -|-..|++++|++  ..++..|.||...+-.++..
T Consensus       325 vydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~  374 (434)
T KOG1009|consen  325 VYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPW  374 (434)
T ss_pred             EeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcch
Confidence            99999988877665 4778999999999  79999999999887766665

>KOG4227|consensus

Probab=99.92  E-value=3e-22  Score=154.91  Aligned_cols=285  Identities=15%  Similarity=0.194  Sum_probs=211.1

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc------cccccccc-ccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR------KQSGALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~------~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      +.+|.+.|+++.|  ++++||+|+.|..+++|++...      +++..... |...|.|++|....+.+++|+.+++|..
T Consensus        52 ~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~  131 (609)
T KOG4227|consen   52 VREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIK  131 (609)
T ss_pred             hhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEe
Confidence            3589999999999  8999999999999999998643      44443333 5588999999999999999999999999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc-eeeeeeccccCccccceEEEEEccCC-c
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR-SAYITNLSSYGVGFENLDSVVWSPEG-L  158 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~-~  158 (327)
                      .|+++.+.+..+........|..+..+|..+.|++.+.++.|.+||.+... ....+-....   ......+.|+|.. .
T Consensus       132 HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~---~~~F~t~~F~P~~P~  208 (609)
T KOG4227|consen  132 HDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANS---GKNFYTAEFHPETPA  208 (609)
T ss_pred             eecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCC---CccceeeeecCCCce
Confidence            999998888776333222349999999988899999999999999998765 2222222222   1237889999976 4


Q ss_pred             EEEeec-CCeEEEEEecCCce-eeEe------c-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce-eEEeee---
Q psy7482         159 LYAIPI-QNKAVVFSVEKAGV-LQTL------K-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH-LWQIKA---  224 (327)
Q Consensus       159 ~l~~~~-~~~i~i~d~~~~~~-~~~~------~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~-~~~~~~---  224 (327)
                      ++++.+ .+.+-+||.+.... +...      + ....-.+..|+|+ ..+++--....-.+||+.+..+ +.++..   
T Consensus       209 Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~  288 (609)
T KOG4227|consen  209 LILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPN  288 (609)
T ss_pred             eEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCC
Confidence            566665 78899999886432 1111      1 1223467889998 6666666666667788876443 333321   


Q ss_pred             ---cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC-----------------------ceeEEeecccCceEEEee
Q psy7482         225 ---SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG-----------------------SHLWHIKASASRIKGLAS  278 (327)
Q Consensus       225 ---~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~-----------------------~~~~~~~~~~~~v~~~~~  278 (327)
                         ....+.+++|   .+..-+++|+.+-.|++|.+...                       +.+..+++|...++.+.|
T Consensus       289 GY~N~~T~KS~~F---~~D~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF  365 (609)
T KOG4227|consen  289 GYCNIKTIKSMTF---IDDYTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRF  365 (609)
T ss_pred             cceeeeeeeeeee---ecceeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceee
Confidence               1124677788   56667999999999999987531                       134567899999999999


Q ss_pred             eC--cEEEEEecCCcEEEEEccCc
Q psy7482         279 HR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       279 ~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +|  .+|++.+-.+.+++|.-...
T Consensus       366 ~~H~~~l~SSGVE~~~KlWS~~r~  389 (609)
T KOG4227|consen  366 SQHNNLLVSSGVENSFKLWSDHRL  389 (609)
T ss_pred             cCCcceEeccchhhheeccccccC
Confidence            99  88888889999999976544

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.92  E-value=3.5e-20  Score=157.83  Aligned_cols=300  Identities=20%  Similarity=0.399  Sum_probs=230.0

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc-ccccccccc-ccEEEEEE-CCCCC-eEEEecC-CCcEEEEE
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-QSGALMQHE-GTITCLKF-TPEGS-HLISCSD-DGSIAIFR   82 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~-~~~~~~~~~-~~v~~~~~-~~~~~-~l~~~~~-d~~i~iw~   82 (327)
                      ..+|...+.++.+  .+..++.++.|+.+.+|+...+. ....+..+. ..+..+.+ ++++. .++..+. |+.+.+|+
T Consensus        61 ~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  140 (466)
T COG2319          61 LRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWD  140 (466)
T ss_pred             eeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEE
Confidence            3478999999999  78888888899999999998876 666666544 36777777 88777 5555444 99999999


Q ss_pred             cCC-CeEEEeEEecccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-E
Q psy7482          83 VGS-WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-L  159 (327)
Q Consensus        83 ~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~  159 (327)
                      ... ......+ ..|... |..+.|+|++..+++++. |+.+++|++..+........     +...+.+++|+|++. .
T Consensus       141 ~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~  213 (466)
T COG2319         141 LSTPGKLIRTL-EGHSES-VTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAG-----HTDPVSSLAFSPDGGLL  213 (466)
T ss_pred             ecCCCeEEEEE-ecCccc-EEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeecc-----CCCceEEEEEcCCcceE
Confidence            997 6666776 788887 999999999998888885 99999999988666555443     344599999999998 5


Q ss_pred             EEeec-CCeEEEEEecCCceee-Eec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce-eEEeeecccceEEEEE
Q psy7482         160 YAIPI-QNKAVVFSVEKAGVLQ-TLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH-LWQIKASASRIKGLVF  234 (327)
Q Consensus       160 l~~~~-~~~i~i~d~~~~~~~~-~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~  234 (327)
                      +++++ |+.+++||...+.... .+. +.... ...|+|+ ..+++++.++.+++|+.+.... +..+..|...+.++.+
T Consensus       214 ~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  292 (466)
T COG2319         214 IASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAF  292 (466)
T ss_pred             EEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEE
Confidence            55534 9999999988777777 455 44443 3378898 5888999999999999987665 4444678889999988


Q ss_pred             EecCCCcEEEEecCCCeEEEEEcCCCceeEEee--cccCceEEEeeeC--cEEEEE-ecCCcEEEEEccCccCCCceeee
Q psy7482         235 FSIPQETTVCTGNEESAITAYNLTDGSHLWHIK--ASASRIKGLASHR--NHLICI-TSAGDLVVWELNEDVTREPQRVS  309 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~--~~l~~~-~~dg~v~iw~~~~~~~~~~~~~~  309 (327)
                      .  |++..+++++.|+.+.+||...........  .|...+..+.|.+  ..++.+ ..|+.+.+|++....     ...
T Consensus       293 ~--~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~~  365 (466)
T COG2319         293 S--PDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK-----PLK  365 (466)
T ss_pred             C--CCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc-----eeE
Confidence            5  788888889889889999998888776665  7887899999832  345555 678899999998882     222


Q ss_pred             ecCCCCceEEEEeCC
Q psy7482         310 ATNDGCRFTCLAIRP  324 (327)
Q Consensus       310 ~~~~~~~i~~l~~~p  324 (327)
                      .......+..+.+.+
T Consensus       366 ~~~~~~~~~~~~~~~  380 (466)
T COG2319         366 TLEGHSNVLSVSFSP  380 (466)
T ss_pred             EecCCceEEEEEECC
Confidence            222222266666655

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.91  E-value=1e-20  Score=155.11  Aligned_cols=288  Identities=14%  Similarity=0.216  Sum_probs=185.1

Q ss_pred             EEEecCCCeEEEEEccc-cc--cccccccccccEEEEEECCCCCeEEEec-CCCcEEEEEcC-CCeEEEeEEecccCCce
Q psy7482          27 AASSGADETVVLYDMVK-RK--QSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVG-SWQLEKLFKKAHKGTAV  101 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~-~~~~~~~~~~~~~~~~v  101 (327)
                      +++...++.|.+|++.+ ++  .+..+. +.+....++++|++++|++++ .++.|.+|++. +++....-....... .
T Consensus         5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~-p   82 (330)
T PRK11028          5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGS-P   82 (330)
T ss_pred             EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCC-c
Confidence            34446789999999964 32  334443 345577899999999887664 57889999996 333321111122234 6


Q ss_pred             eeEEEecCCCEEEEEeC-CCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCc
Q psy7482         102 NHISIHPSGKLALSVGK-DKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG  177 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~  177 (327)
                      ..+.++|+++++++++. ++.|.+|++++. ...........   ......++++|+++++.++.  ++.|.+||+.+..
T Consensus        83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~---~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g  159 (330)
T PRK11028         83 THISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEG---LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDG  159 (330)
T ss_pred             eEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccC---CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCC
Confidence            78999999998888764 789999999642 22111111011   12267788999998886664  7999999997643


Q ss_pred             eee-------EecCCCceeEEEeecC-ceEEEeCC-CCcEEEEEcCC--Cc--eeEEeeecc------cceEEEEEEecC
Q psy7482         178 VLQ-------TLKSESKVHSVCFLNE-TTVCTGNE-ESAITAYNLTD--GS--HLWQIKASA------SRIKGLVFFSIP  238 (327)
Q Consensus       178 ~~~-------~~~~~~~i~~~~~~~~-~~l~~~~~-d~~i~i~d~~~--~~--~~~~~~~~~------~~v~~~~~~~s~  238 (327)
                      .+.       ..........+.|+|+ ++++++.. ++.|.+|++..  ++  .+..+....      .....+.+  +|
T Consensus       160 ~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~--~p  237 (330)
T PRK11028        160 HLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHI--TP  237 (330)
T ss_pred             cccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEE--CC
Confidence            221       1223455678999999 66666654 89999999973  22  233332211      12234667  49


Q ss_pred             CCcEEEEecC-CCeEEEEEcCCCceeEEeecc---cCceEEEeeeC--cEEEEEec-CCcEEEEEccCccCCCceeeeec
Q psy7482         239 QETTVCTGNE-ESAITAYNLTDGSHLWHIKAS---ASRIKGLASHR--NHLICITS-AGDLVVWELNEDVTREPQRVSAT  311 (327)
Q Consensus       239 ~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~---~~~v~~~~~~~--~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~~  311 (327)
                      ++++++++.. ++.|.+|++........+.++   ......+.++|  ++|+++.. +++|.+|+++... .....+...
T Consensus       238 dg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~-g~l~~~~~~  316 (330)
T PRK11028        238 DGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGET-GLLTELGRY  316 (330)
T ss_pred             CCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcCCC-CcEEEcccc
Confidence            9999998864 789999998654322222222   12456789998  67776664 8899999986431 123334444


Q ss_pred             CCCCceEEEEe
Q psy7482         312 NDGCRFTCLAI  322 (327)
Q Consensus       312 ~~~~~i~~l~~  322 (327)
                      ..+....|+++
T Consensus       317 ~~g~~P~~~~~  327 (330)
T PRK11028        317 AVGQGPMWVSV  327 (330)
T ss_pred             ccCCCceEEEE
Confidence            44556677766

>KOG0290|consensus

Probab=99.91  E-value=2.8e-22  Score=148.97  Aligned_cols=276  Identities=13%  Similarity=0.196  Sum_probs=198.2

Q ss_pred             ccccccccccccEEEEEECC---CCCeEEEecC----CCcEEEEEc--CCCeEEEeEEecccCCceeeEEEecCC-----
Q psy7482          45 KQSGALMQHEGTITCLKFTP---EGSHLISCSD----DGSIAIFRV--GSWQLEKLFKKAHKGTAVNHISIHPSG-----  110 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~----d~~i~iw~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~-----  110 (327)
                      +.+..+.. .-++.++.|+.   ...+|+.|+.    .+.|.|-.+  ++++.+..-...|. .|++.+.|.|+.     
T Consensus        36 ~eiy~Y~a-p~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~-YP~tK~~wiPd~~g~~p  113 (364)
T KOG0290|consen   36 KEIYTYNA-PWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHP-YPVTKLMWIPDSKGVYP  113 (364)
T ss_pred             ceEEEecC-CCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCC-CCccceEecCCccccCc
Confidence            33444443 34688899984   2447888864    355666544  44555444322333 459999999976     


Q ss_pred             CEEEEEeCCCCEEEEEcCCC--ceee--eeeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCCce----ee
Q psy7482         111 KLALSVGKDKTLRTWNLVKG--RSAY--ITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKAGV----LQ  180 (327)
Q Consensus       111 ~~l~~~~~dg~i~iwd~~~~--~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~----~~  180 (327)
                      .+|++.+  ..+++|.+...  +...  .+..........+++++.|+. +-+++.+++ |-+..|||++++..    .+
T Consensus       114 dlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQ  191 (364)
T KOG0290|consen  114 DLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQ  191 (364)
T ss_pred             chhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeE
Confidence            3555544  47999998742  2111  112222233445789999987 456777777 99999999998732    33


Q ss_pred             EecCCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEe---eecccceEEEEEEecCCCcEEEEecCC-CeEEE
Q psy7482         181 TLKSESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQI---KASASRIKGLVFFSIPQETTVCTGNEE-SAITA  254 (327)
Q Consensus       181 ~~~~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~~s~~~~~l~~~~~d-~~i~i  254 (327)
                      .+.|..+|..++|..+  +.+++.+.||.+|+||++..+.-..+   .....+...++|+. .|-+++|+-..| ..|.|
T Consensus       192 LIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnk-qDpnymATf~~dS~~V~i  270 (364)
T KOG0290|consen  192 LIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNK-QDPNYMATFAMDSNKVVI  270 (364)
T ss_pred             EEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCc-CCchHHhhhhcCCceEEE
Confidence            4459999999999986  78999999999999999987653332   22256788899975 678889887665 56999


Q ss_pred             EEcCCCc-eeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCccC-CCceeeeecCCCCceEEEEeCCC
Q psy7482         255 YNLTDGS-HLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDVT-REPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       255 ~d~~~~~-~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~~-~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      .|++... ++.++++|.+.|++++|.|   ..|+++++|..+.+||+..... ....++..+..+++|+.+.|+|.
T Consensus       271 LDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~  346 (364)
T KOG0290|consen  271 LDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSS  346 (364)
T ss_pred             EEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeeccc
Confidence            9999765 8899999999999999999   8999999999999999988642 22234444557789999999974

>KOG0644|consensus

Probab=99.91  E-value=5.7e-24  Score=178.45  Aligned_cols=279  Identities=15%  Similarity=0.202  Sum_probs=220.7

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      .+.||...|.|..|  .|.++++|+.|..|+||..++..++....+|.+.|+.++.+.+..++++++.|..|++|.+..+
T Consensus       185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~  264 (1113)
T KOG0644|consen  185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDG  264 (1113)
T ss_pred             HHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCC
Confidence            34589999999999  8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q  165 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~  165 (327)
                      .++..+ .+|.+. |++++|+|-.    +.+.||++++||.+ -......+-+......+.+.++.|-.++.-+++++ +
T Consensus       265 ~pvsvL-rghtga-vtaiafsP~~----sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d  337 (1113)
T KOG0644|consen  265 APVSVL-RGHTGA-VTAIAFSPRA----SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRD  337 (1113)
T ss_pred             chHHHH-hccccc-eeeeccCccc----cCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccccccccccCC
Confidence            999999 999999 9999999954    67889999999987 12111111111112224477777877888888887 7


Q ss_pred             CeEEEEEecCCceeeEecCCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482         166 NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      +.-..|.......     +...+.-+..+.+  .+.+++-.+-.+.+|++.++...+.+.+|...+..+.++| -+.+..
T Consensus       338 ~ea~n~e~~~l~~-----~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hp-fn~ri~  411 (1113)
T KOG0644|consen  338 GEARNHEFEQLAW-----RSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHP-FNPRIA  411 (1113)
T ss_pred             cccccchhhHhhh-----hccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecC-CCcHhh
Confidence            7766665432111     1111111222222  4566777788899999999999999999999999999986 677777


Q ss_pred             EEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         244 CTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+++.||...|||+-.|.++..+......+..-+|++  ..++....-|.++|.....+
T Consensus       412 msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs  470 (1113)
T KOG0644|consen  412 MSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQS  470 (1113)
T ss_pred             hhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCC
Confidence            8999999999999999988776654455777888998  57777777788988876655

>KOG1334|consensus

Probab=99.91  E-value=1.8e-23  Score=165.42  Aligned_cols=289  Identities=19%  Similarity=0.278  Sum_probs=226.4

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc-cccccEEEEEECC--CCCeEEEecCCCcEEEEEc
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~   83 (327)
                      ++.+|.+.|..+.|  .|..|++|+.|..|.+||...++....+. +|...|....|-|  +...+++++.||.+++=.+
T Consensus       137 kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i  216 (559)
T KOG1334|consen  137 KLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEI  216 (559)
T ss_pred             cccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeee
Confidence            45589999999999  89999999999999999999988777665 6988898889988  4567999999999999876


Q ss_pred             C-CCeEE--EeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc-ccceEEEEEccCCc
Q psy7482          84 G-SWQLE--KLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG-FENLDSVVWSPEGL  158 (327)
Q Consensus        84 ~-~~~~~--~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~  158 (327)
                      . ++...  ..+ ..|.+. |.-++.-|+ ...|.+++.|+.+.-+|++++.....+........ .-....++..|.+.
T Consensus       217 ~~t~~~e~t~rl-~~h~g~-vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt  294 (559)
T KOG1334|consen  217 LETGYVENTKRL-APHEGP-VHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNT  294 (559)
T ss_pred             ccccceecceec-ccccCc-cceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCc
Confidence            4 33333  223 556666 999999995 45799999999999999998776554442222110 11367888999665


Q ss_pred             -EEEeec-CCeEEEEEecCCce------eeEec-------CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCC--C----
Q psy7482         159 -LYAIPI-QNKAVVFSVEKAGV------LQTLK-------SESKVHSVCFLNE-TTVCTGNEESAITAYNLTD--G----  216 (327)
Q Consensus       159 -~l~~~~-~~~i~i~d~~~~~~------~~~~~-------~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~--~----  216 (327)
                       .++++. |..+++||.+.-..      +..+-       ..-.|++++|+.+ +-++++..|-.|+++.-..  +    
T Consensus       295 ~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~  374 (559)
T KOG1334|consen  295 NEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPD  374 (559)
T ss_pred             cccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCC
Confidence             777776 89999999875322      22221       3457999999976 7788888888999995432  2    


Q ss_pred             ------ceeEE-eeeccc--ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEE
Q psy7482         217 ------SHLWQ-IKASAS--RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLIC  285 (327)
Q Consensus       217 ------~~~~~-~~~~~~--~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~  285 (327)
                            ..+.. +++|..  .|..+.|+ .|...|+++|+.-|.|.||+-.+++.+..+.+....|+||.-+|  ..||+
T Consensus       375 ~~s~~~~~~k~vYKGHrN~~TVKgVNFf-GPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAs  453 (559)
T KOG1334|consen  375 PSSPREQYVKRVYKGHRNSRTVKGVNFF-GPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLAS  453 (559)
T ss_pred             CCcchhhccchhhcccccccccceeeec-cCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhc
Confidence                  12233 678754  58889998 49999999999999999999999999999988888999999999  99999


Q ss_pred             EecCCcEEEEEccCc
Q psy7482         286 ITSAGDLVVWELNED  300 (327)
Q Consensus       286 ~~~dg~v~iw~~~~~  300 (327)
                      .+-|..|+||.....
T Consensus       454 SGid~DVKIWTP~~~  468 (559)
T KOG1334|consen  454 SGIDHDVKIWTPLTA  468 (559)
T ss_pred             cCCccceeeecCCcc
Confidence            999999999988544

>KOG0303|consensus

Probab=99.90  E-value=5.2e-22  Score=153.35  Aligned_cols=201  Identities=18%  Similarity=0.289  Sum_probs=165.5

Q ss_pred             ccCCccEEEEEe---CCCEEEEecCCCeEEEEEcccc-------ccccccccccccEEEEEECCC-CCeEEEecCCCcEE
Q psy7482          11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIA   79 (327)
Q Consensus        11 ~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~   79 (327)
                      .||.++|..++|   +.+.||+||.|.+|.||.+..+       +++..+.+|...|--++|+|. .+.|++++.|.+|.
T Consensus        78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~  157 (472)
T KOG0303|consen   78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVS  157 (472)
T ss_pred             cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEE
Confidence            589999999999   8899999999999999998765       345678899999999999994 56889999999999


Q ss_pred             EEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE
Q psy7482          80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL  159 (327)
Q Consensus        80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  159 (327)
                      +||+.+++.+-.+ . |.+. |.++.|+.||.+|++.+.|..|++||.++++.+..-..+..    .....+.|-.++.+
T Consensus       158 iWnv~tgeali~l-~-hpd~-i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG----~k~~Raifl~~g~i  230 (472)
T KOG0303|consen  158 IWNVGTGEALITL-D-HPDM-VYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEG----AKPARAIFLASGKI  230 (472)
T ss_pred             EEeccCCceeeec-C-CCCe-EEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccC----CCcceeEEeccCce
Confidence            9999999988887 3 8888 99999999999999999999999999999988766522222    12455667778887


Q ss_pred             EEeec----CCeEEEEEecCCc---eeeEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCce
Q psy7482         160 YAIPI----QNKAVVFSVEKAG---VLQTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSH  218 (327)
Q Consensus       160 l~~~~----~~~i~i~d~~~~~---~~~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~  218 (327)
                      +.+|.    +..+-+||..+.+   ....+...+.|.---|.+| +. .++|-.|+.|+.|.+.+..+
T Consensus       231 ~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P  298 (472)
T KOG0303|consen  231 FTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPP  298 (472)
T ss_pred             eeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCc
Confidence            77773    6789999977654   3445556777777778888 54 45777999999999987654

>KOG0649|consensus

Probab=99.90  E-value=2.1e-20  Score=135.79  Aligned_cols=242  Identities=13%  Similarity=0.171  Sum_probs=182.0

Q ss_pred             EeeeeccCCccEEEEEeCCCEEEEecCCCeEEEEEcccccc------cccc--cccc-----ccEEEEEECCCCCeEEEe
Q psy7482           6 QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQ------SGAL--MQHE-----GTITCLKFTPEGSHLISC   72 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~------~~~~--~~~~-----~~v~~~~~~~~~~~l~~~   72 (327)
                      +.+..++|.++|..++|...+|++|+ ||.|+=|.......      +...  ..|.     -.|++|-..|..+-++.+
T Consensus        54 ~iv~eqahdgpiy~~~f~d~~Lls~g-dG~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~A  132 (325)
T KOG0649|consen   54 KIVPEQAHDGPIYYLAFHDDFLLSGG-DGLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFA  132 (325)
T ss_pred             ceeeccccCCCeeeeeeehhheeecc-CceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEe
Confidence            34555899999999999888888887 69999998654322      1111  1122     358999999988888888


Q ss_pred             cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCc-----cccc
Q psy7482          73 SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV-----GFEN  147 (327)
Q Consensus        73 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~~~  147 (327)
                      +.|+.++-||+++|+..+.+ .+|.+. |.++.-......+++|++||++++||.++++.+..+.......     -...
T Consensus       133 gGD~~~y~~dlE~G~i~r~~-rGHtDY-vH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~w  210 (325)
T KOG0649|consen  133 GGDGVIYQVDLEDGRIQREY-RGHTDY-VHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKW  210 (325)
T ss_pred             cCCeEEEEEEecCCEEEEEE-cCCcce-eeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCce
Confidence            89999999999999999999 999999 9999886666679999999999999999999887765443311     1122


Q ss_pred             eEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeeccc
Q psy7482         148 LDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASAS  227 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  227 (327)
                      |.+++  -+...+++|....+.+|.+++.++...+..+.++..+.|.. ..++++++.+.+.-|.+. |......+....
T Consensus       211 igala--~~edWlvCGgGp~lslwhLrsse~t~vfpipa~v~~v~F~~-d~vl~~G~g~~v~~~~l~-Gvl~a~ip~~s~  286 (325)
T KOG0649|consen  211 IGALA--VNEDWLVCGGGPKLSLWHLRSSESTCVFPIPARVHLVDFVD-DCVLIGGEGNHVQSYTLN-GVLQANIPVEST  286 (325)
T ss_pred             eEEEe--ccCceEEecCCCceeEEeccCCCceEEEecccceeEeeeec-ceEEEeccccceeeeeec-cEEEEeccCCcc
Confidence            44444  45668888888999999999999999999999999999965 467777888889999874 444444444444


Q ss_pred             ceEEEEEEecCCCcEEEEecCCCeEEEE
Q psy7482         228 RIKGLVFFSIPQETTVCTGNEESAITAY  255 (327)
Q Consensus       228 ~v~~~~~~~s~~~~~l~~~~~d~~i~i~  255 (327)
                      ..++..+..+| -+++..++..+.+.|+
T Consensus       287 ~c~s~s~~~~p-~k~~s~ag~s~~~~i~  313 (325)
T KOG0649|consen  287 ACYSASWQTSP-IKFISIAGFSNKLHIL  313 (325)
T ss_pred             ceeeecccCCc-eEEEEecccceeeeee
Confidence            55666664333 4555566666666665

>KOG1587|consensus

Probab=99.89  E-value=8.9e-21  Score=159.45  Aligned_cols=264  Identities=13%  Similarity=0.145  Sum_probs=191.6

Q ss_pred             CCeEEEEEcccc-ccccccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCeE-----EEeEEecccCCceeeEE
Q psy7482          33 DETVVLYDMVKR-KQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQL-----EKLFKKAHKGTAVNHIS  105 (327)
Q Consensus        33 dg~v~~w~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~-----~~~~~~~~~~~~v~~~~  105 (327)
                      ++.+.+|++.+. .+...+. -...|+++.|+| +..+++.|+.+|.|.+||+..+..     +......|... +..+.
T Consensus       221 ~~~~~vW~~~~p~~Pe~~~~-~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~-v~~vv  298 (555)
T KOG1587|consen  221 DGVLLVWSLKNPNTPELVLE-SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEP-VTAVV  298 (555)
T ss_pred             CceEEEEecCCCCCceEEEe-cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcC-eEEEE
Confidence            357999999877 3333343 567899999999 567888899999999999987654     22222455666 99999


Q ss_pred             EecCC--CEEEEEeCCCCEEEEEcCCCceee-eeecccc------CccccceEEEEEccCC-cEEEeec-CCeEEEEEec
Q psy7482         106 IHPSG--KLALSVGKDKTLRTWNLVKGRSAY-ITNLSSY------GVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVE  174 (327)
Q Consensus       106 ~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~------~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~  174 (327)
                      |..+.  .-+++++.||.|..|+++.-.... .......      ......++++.|.+.. ..+++|+ +|.|..-+-.
T Consensus       299 W~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~  378 (555)
T KOG1587|consen  299 WLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRK  378 (555)
T ss_pred             EeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEecc
Confidence            98754  449999999999999887543311 1111111      1222348899998844 5677776 7887763332


Q ss_pred             CCce--------eeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcC-CCceeEEeeecccceEEEEEEecCCCcE
Q psy7482         175 KAGV--------LQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLT-DGSHLWQIKASASRIKGLVFFSIPQETT  242 (327)
Q Consensus       175 ~~~~--------~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~s~~~~~  242 (327)
                      ..+.        ...+. |.++|+++.++|=  ..+++++ |.++++|... ...++..+..+...+++++|+| -....
T Consensus       379 g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSp-trpav  456 (555)
T KOG1587|consen  379 GYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSP-TRPAV  456 (555)
T ss_pred             CCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcC-cCceE
Confidence            2221        21222 7899999999996  4455554 9999999988 6777888888888899999975 45678


Q ss_pred             EEEecCCCeEEEEEcCCCc--eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         243 VCTGNEESAITAYNLTDGS--HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       243 l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++++..||.|.+||+....  ++.....+....+.+.|++  +.|++|...|++.+|++...
T Consensus       457 F~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~  518 (555)
T KOG1587|consen  457 FATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES  518 (555)
T ss_pred             EEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence            8899999999999987543  5555555566677778888  88999999999999999765

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.89  E-value=1.3e-18  Score=148.08  Aligned_cols=281  Identities=26%  Similarity=0.445  Sum_probs=217.1

Q ss_pred             eeeeccCCccEEEEEe--CCCEEEEecC-CCeEEEEEccccccccccccccccEEEEEECCCCC-eEEEecCCCcEEEEE
Q psy7482           7 TFVTHSHTASVRSVAA--TSKLAASSGA-DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFR   82 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~-dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~   82 (327)
                      ...+.+|...|.+++|  +++.+++++. |+.+++|+...++....+.+|...|.+++|+|++. .+++++.|+.+++||
T Consensus       148 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd  227 (466)
T COG2319         148 IRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWD  227 (466)
T ss_pred             EEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEE
Confidence            3445589999999999  7778888885 99999999998888888989999999999999998 555559999999999


Q ss_pred             cCCCeEEE-eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce-eeeeeccccCccccceEEEEEccCCcEE
Q psy7482          83 VGSWQLEK-LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS-AYITNLSSYGVGFENLDSVVWSPEGLLY  160 (327)
Q Consensus        83 ~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l  160 (327)
                      ...+.... .+ ..|... . ...|++++..+++++.|+.+++|+...... ....     ..+...+.++.|.|++..+
T Consensus       228 ~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~  299 (466)
T COG2319         228 LSTGKLLRSTL-SGHSDS-V-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTL-----SGHSSSVLSVAFSPDGKLL  299 (466)
T ss_pred             CCCCcEEeeec-CCCCcc-e-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEE-----ecCCccEEEEEECCCCCEE
Confidence            88777777 45 666665 4 338999998899999999999999987665 2222     2224569999999988777


Q ss_pred             Eeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEe-CCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482         161 AIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTG-NEESAITAYNLTDGSHLWQIKASASRIKGLVF  234 (327)
Q Consensus       161 ~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  234 (327)
                      ++++ ++.+.+||...........   +...+..+.+.++ ..++.+ ..|+.+.+|+.............. .+..+.+
T Consensus       300 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  378 (466)
T COG2319         300 ASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHS-NVLSVSF  378 (466)
T ss_pred             EEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecCCc-eEEEEEE
Confidence            7765 8789999998877665553   5556888988433 345555 688999999998877333332222 2778888


Q ss_pred             EecCCCcEEEE-ecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482         235 FSIPQETTVCT-GNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       235 ~~s~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~  299 (327)
                      .  + ...+.. +..++.+.+|+............+...+....+.+  ..+++++.++.+++|+...
T Consensus       379 ~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (466)
T COG2319         379 S--P-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT  443 (466)
T ss_pred             C--C-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence            5  4 333333 78899999999998887777766545788888888  7788889999999999988

>KOG2110|consensus

Probab=99.89  E-value=2.7e-18  Score=132.02  Aligned_cols=286  Identities=12%  Similarity=0.146  Sum_probs=204.5

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC--CcEEEEEcCCCeE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD--GSIAIFRVGSWQL   88 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~   88 (327)
                      ....+..+.|  +...|..|+.|| -++++................|--+-|+.  .++|..+.+  +.+++.+++.+..
T Consensus         4 ~~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~~   80 (391)
T KOG2110|consen    4 KKPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKTT   80 (391)
T ss_pred             CCcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCce
Confidence            3456777778  667788888888 78888776655433333445566777774  455555444  4599999998888


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---C
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---Q  165 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~  165 (327)
                      +..+...  .. |.++.++.  +.|+++-.+ .|+|||+++.+.+..+.....  +...+.++++++.+.+++.-+   .
T Consensus        81 ICe~~fp--t~-IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~--n~~gl~AlS~n~~n~ylAyp~s~t~  152 (391)
T KOG2110|consen   81 ICEIFFP--TS-ILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPP--NPKGLCALSPNNANCYLAYPGSTTS  152 (391)
T ss_pred             EEEEecC--Cc-eEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCC--CccceEeeccCCCCceEEecCCCCC
Confidence            8776222  23 99999874  456666654 599999999888776644422  122366777777777888754   6


Q ss_pred             CeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCc-EEEEEcCCCceeEEeeec--ccceEEEEEEecCCC
Q psy7482         166 NKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESA-ITAYNLTDGSHLWQIKAS--ASRIKGLVFFSIPQE  240 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~  240 (327)
                      |.|.+||..+-+....+. |.+++.+++|+++ .+|+++++.|+ ||+|.+.+|+.+.+|+-.  ...|.+++|+  |++
T Consensus       153 GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs--~ds  230 (391)
T KOG2110|consen  153 GDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFS--PDS  230 (391)
T ss_pred             ceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEEC--CCC
Confidence            999999999999999998 9999999999999 78999999997 589999999999988643  3468899995  999


Q ss_pred             cEEEEecCCCeEEEEEcCCCc-------------------------------------eeEEeecccCce-EEEeeeC--
Q psy7482         241 TTVCTGNEESAITAYNLTDGS-------------------------------------HLWHIKASASRI-KGLASHR--  280 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~-------------------------------------~~~~~~~~~~~v-~~~~~~~--  280 (327)
                      ++|++.+..++|.+|.++...                                     .....+...... ..+.+.+  
T Consensus       231 ~~L~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~  310 (391)
T KOG2110|consen  231 QFLAASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQ  310 (391)
T ss_pred             CeEEEecCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccC
Confidence            999999999999999875421                                     000011111111 1223332  


Q ss_pred             --cEEEEEecCCcEEEEEccCccCCCceeeeec
Q psy7482         281 --NHLICITSAGDLVVWELNEDVTREPQRVSAT  311 (327)
Q Consensus       281 --~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~  311 (327)
                        ..+..++.||.++.|.++.....+...+...
T Consensus       311 ~~~~v~vas~dG~~y~y~l~~~~gGec~lik~h  343 (391)
T KOG2110|consen  311 KIPRVLVASYDGHLYSYRLPPKEGGECALIKRH  343 (391)
T ss_pred             CCCEEEEEEcCCeEEEEEcCCCCCceeEEEEee
Confidence              7888899999999999987532344444433

>KOG0649|consensus

Probab=99.89  E-value=6.9e-20  Score=133.10  Aligned_cols=235  Identities=15%  Similarity=0.215  Sum_probs=176.1

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEcCC---------Ce-EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGS---------WQ-LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~---------~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      ..|.+-+++|.+++|++|..+|.|.+..+++         ++ .+... .+|.++ ++.++|.  ..+|++++ ||.|+-
T Consensus        11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~e-qahdgp-iy~~~f~--d~~Lls~g-dG~V~g   85 (325)
T KOG0649|consen   11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPE-QAHDGP-IYYLAFH--DDFLLSGG-DGLVYG   85 (325)
T ss_pred             HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeec-cccCCC-eeeeeee--hhheeecc-CceEEE
Confidence            3466778999999999999999999998853         22 22222 677777 9999998  44677766 499999


Q ss_pred             EEcCCCce------eeeeec--cccCccccceEEEEEccCC-cEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEee
Q psy7482         125 WNLVKGRS------AYITNL--SSYGVGFENLDSVVWSPEG-LLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFL  194 (327)
Q Consensus       125 wd~~~~~~------~~~~~~--~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~  194 (327)
                      |..+....      +.....  .........|+++...|.. .++.+|+|+.++-||+++|+....++ |...+.++.-.
T Consensus        86 w~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R  165 (325)
T KOG0649|consen   86 WEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGR  165 (325)
T ss_pred             eeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeec
Confidence            97654322      111111  1111122348899999855 56666679999999999999999998 88899999884


Q ss_pred             c-CceEEEeCCCCcEEEEEcCCCceeEEeeecc----------cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482         195 N-ETTVCTGNEESAITAYNLTDGSHLWQIKASA----------SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       195 ~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----------~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                      . ++.+++|++||++++||.++++.+..+....          ..|.+++    .+...|++|+ ...+.+|.++..++.
T Consensus       166 ~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala----~~edWlvCGg-Gp~lslwhLrsse~t  240 (325)
T KOG0649|consen  166 NANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALA----VNEDWLVCGG-GPKLSLWHLRSSEST  240 (325)
T ss_pred             ccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEe----ccCceEEecC-CCceeEEeccCCCce
Confidence            4 4899999999999999999999887764322          2344555    4667777765 467999999999887


Q ss_pred             EEeecccCceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         264 WHIKASASRIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       264 ~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ..+.-. .++..+.|..+.++++++.+.|.-|.+...
T Consensus       241 ~vfpip-a~v~~v~F~~d~vl~~G~g~~v~~~~l~Gv  276 (325)
T KOG0649|consen  241 CVFPIP-ARVHLVDFVDDCVLIGGEGNHVQSYTLNGV  276 (325)
T ss_pred             EEEecc-cceeEeeeecceEEEeccccceeeeeeccE
Confidence            777633 478889999999999998889999988664

>KOG0771|consensus

Probab=99.88  E-value=1.5e-21  Score=152.07  Aligned_cols=197  Identities=17%  Similarity=0.184  Sum_probs=154.8

Q ss_pred             EEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEec
Q psy7482          18 RSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA   95 (327)
Q Consensus        18 ~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~   95 (327)
                      .+++|  +|..+++|+.||++|+|+..+...+.....|..+|.++.|+|||+.|++-+.| ..+||+.+++..+......
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            45666  89999999999999999998888888888999999999999999999999999 8999999999777666323


Q ss_pred             ccCCceeeEEEecCC---CE--EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEE
Q psy7482          96 HKGTAVNHISIHPSG---KL--ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAV  169 (327)
Q Consensus        96 ~~~~~v~~~~~~~~~---~~--l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~  169 (327)
                      ..+.....+.|+.++   .+  ++.....+.|+.||+.....-...+..........+.+++.+++|++++.|+ +|.|.
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa  306 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA  306 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence            333336777888776   33  3333445677777765433211222222222233499999999999999998 99999


Q ss_pred             EEEecCCceeeEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCC
Q psy7482         170 VFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       170 i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~  215 (327)
                      +++..+.+.++..+  |...|+.+.|+|+ +++++.+.+.+..+..+.-
T Consensus       307 i~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  307 IYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             EEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            99999999988887  8899999999999 8888888888888877654

>KOG1517|consensus

Probab=99.88  E-value=8.5e-21  Score=163.46  Aligned_cols=269  Identities=16%  Similarity=0.213  Sum_probs=193.6

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccc---cccEEEEEECC--CCCeEEEecCCCcEEEEEcCC-----CeEEEeE
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQH---EGTITCLKFTP--EGSHLISCSDDGSIAIFRVGS-----WQLEKLF   92 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~---~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~~~-----~~~~~~~   92 (327)
                      -...++++.....|++||.+.++....+..+   ...|+.+.+-.  |..++++|+.||.|+||+--.     .+.+..+
T Consensus      1075 f~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw 1154 (1387)
T KOG1517|consen 1075 FEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAW 1154 (1387)
T ss_pred             CCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEee
Confidence            4556777776778999999999988777643   35688888876  456899999999999996422     2222222


Q ss_pred             ------EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEeec-
Q psy7482          93 ------KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-  164 (327)
Q Consensus        93 ------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-  164 (327)
                            ..+..+. =.-++|.....+|++++.-..|+|||.........++....    ..++++.-+- .|+.+++|. 
T Consensus      1155 ~~Ls~~~~~~r~~-~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~----t~vTaLS~~~~~gn~i~AGfa 1229 (1387)
T KOG1517|consen 1155 SSLSDQLPGARGT-GLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSS----TLVTALSADLVHGNIIAAGFA 1229 (1387)
T ss_pred             ccccccCccCCCC-CeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCC----ccceeecccccCCceEEEeec
Confidence                  0112222 13457877666777777788999999988777666655543    2266665443 468888886 


Q ss_pred             CCeEEEEEecCCce---eeEec-CCCc--eeEEEeecC--ceEEEeCCCCcEEEEEcCCCcee--EEeeecc--c-ceEE
Q psy7482         165 QNKAVVFSVEKAGV---LQTLK-SESK--VHSVCFLNE--TTVCTGNEESAITAYNLTDGSHL--WQIKASA--S-RIKG  231 (327)
Q Consensus       165 ~~~i~i~d~~~~~~---~~~~~-~~~~--i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~--~-~v~~  231 (327)
                      ||.+++||.+....   +...+ |...  |..+.+.++  +.+++|+.+|.|++||++.....  .++..|.  + ..++
T Consensus      1230 DGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTa 1309 (1387)
T KOG1517|consen 1230 DGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTA 1309 (1387)
T ss_pred             CCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCcccee
Confidence            99999999886543   33444 6555  999999886  67999999999999999874222  2222332  3 4888


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec-------ccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA-------SASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +..+  +....+|+|+. +.|+||++.. +.+..++.       ..+.+.+++|+|  -++|+|+.|..|.||.....
T Consensus      1310 l~VH--~hapiiAsGs~-q~ikIy~~~G-~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1310 LTVH--EHAPIIASGSA-QLIKIYSLSG-EQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred             eeec--cCCCeeeecCc-ceEEEEecCh-hhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCc
Confidence            9987  78999999998 9999999754 43333332       235689999999  78888999999999998776

>KOG1240|consensus

Probab=99.88  E-value=4.2e-20  Score=161.41  Aligned_cols=282  Identities=14%  Similarity=0.216  Sum_probs=199.6

Q ss_pred             eeccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccc-------cccccccccccEEEEEECCCCCeEEEecCCCcE
Q psy7482           9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRK-------QSGALMQHEGTITCLKFTPEGSHLISCSDDGSI   78 (327)
Q Consensus         9 ~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i   78 (327)
                      .++.|+..|..++.   ++.+++|||.||+|++||...-.       ...++......+.++...+.++.+|+++.||.|
T Consensus      1043 hL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v 1122 (1431)
T KOG1240|consen 1043 HLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSV 1122 (1431)
T ss_pred             hhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeE
Confidence            45678999998888   56899999999999999986432       222333346778999999999999999999999


Q ss_pred             EEEEcCCCeE-------EEeEEecccCCcee-eEEEec-CCC-EEEEEeCCCCEEEEEcCCCceeeeeeccccCccccce
Q psy7482          79 AIFRVGSWQL-------EKLFKKAHKGTAVN-HISIHP-SGK-LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENL  148 (327)
Q Consensus        79 ~iw~~~~~~~-------~~~~~~~~~~~~v~-~~~~~~-~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v  148 (327)
                      ++.+++-.+.       .... ..+....+. .-+|.. .+. .++.+...+.|..||++.....+..+....   .+.|
T Consensus      1123 ~~~~id~~~~~~~~~~~~ri~-n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~---hG~v 1198 (1431)
T KOG1240|consen 1123 RVLRIDHYNVSKRVATQVRIP-NLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLR---HGLV 1198 (1431)
T ss_pred             EEEEccccccccceeeeeecc-cccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcc---ccce
Confidence            9999875211       1111 222222233 333433 233 788888889999999998776665544433   3459


Q ss_pred             EEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeecC----ceEE-EeC-CCCcEEEEEcCCCcee
Q psy7482         149 DSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE----TTVC-TGN-EESAITAYNLTDGSHL  219 (327)
Q Consensus       149 ~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~----~~l~-~~~-~d~~i~i~d~~~~~~~  219 (327)
                      ++++.+|.+++++.|+ .|.+.+||++-+.++..+.  +..+++.+..+|-    ...+ +++ ..+.|.+|++.++...
T Consensus      1199 TSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~ 1278 (1431)
T KOG1240|consen 1199 TSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQ 1278 (1431)
T ss_pred             eEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcce
Confidence            9999999999999997 8999999999999988887  4567888877763    3333 444 6789999999998765


Q ss_pred             EEeeec-cc------------------ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee-----------------
Q psy7482         220 WQIKAS-AS------------------RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL-----------------  263 (327)
Q Consensus       220 ~~~~~~-~~------------------~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~-----------------  263 (327)
                      ..+... ..                  ......+.  ..+..+.+|+.|..|+.||....+..                 
T Consensus      1279 ~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~--~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s 1356 (1431)
T KOG1240|consen 1279 TVLWASDGAPILSYALPSNDARKPDSLAGISCGVC--EKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSES 1356 (1431)
T ss_pred             EEEEcCCCCcchhhhcccccCCCCCcccceeeecc--cCCceeeecCCccceeeccCCCcccccccccCccccccccchh
Confidence            555332 11                  11112221  34568889999999999997542110                 


Q ss_pred             -------------------------------EEe--------ecccCceEEEeeeC---cEEEEEecCCcEEEEE
Q psy7482         264 -------------------------------WHI--------KASASRIKGLASHR---NHLICITSAGDLVVWE  296 (327)
Q Consensus       264 -------------------------------~~~--------~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~  296 (327)
                                                     ...        ..|..+|+++++-.   .+|++++.||.|+||.
T Consensus      1357 ~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1357 YDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             ccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence                                           000        12556788888765   6999999999999994

>KOG2110|consensus

Probab=99.88  E-value=1.3e-19  Score=139.14  Aligned_cols=233  Identities=15%  Similarity=0.255  Sum_probs=182.1

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC--CCEEEEEcCCCc
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD--KTLRTWNLVKGR  131 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~  131 (327)
                      ...+..+.|+.+...|..|+.|| .++|+.+.......  ....+..|..+-|+  ..+++..+.+  +.+++.+.+.+.
T Consensus         5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~--~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~   79 (391)
T KOG2110|consen    5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFS--KDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKT   79 (391)
T ss_pred             CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhc--ccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCc
Confidence            34577777999999999999997 58888765443211  12222225555665  4466666654  359999999888


Q ss_pred             eeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecC--CC--ceeEEEeecC-ceEEE--eCC
Q psy7482         132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKS--ES--KVHSVCFLNE-TTVCT--GNE  204 (327)
Q Consensus       132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~--~~--~i~~~~~~~~-~~l~~--~~~  204 (327)
                      .+....++..      |.++.++.  +.|++.-...|+|||+++.+.+.++..  ..  .+.++.++++ .+++.  ...
T Consensus        80 ~ICe~~fpt~------IL~VrmNr--~RLvV~Lee~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t  151 (391)
T KOG2110|consen   80 TICEIFFPTS------ILAVRMNR--KRLVVCLEESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTT  151 (391)
T ss_pred             eEEEEecCCc------eEEEEEcc--ceEEEEEcccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCC
Confidence            8888888776      88888874  467777777799999999999998872  23  3444444444 46664  346


Q ss_pred             CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCe-EEEEEcCCCceeEEeeccc--CceEEEeeeC-
Q psy7482         205 ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESA-ITAYNLTDGSHLWHIKASA--SRIKGLASHR-  280 (327)
Q Consensus       205 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~-  280 (327)
                      .|.|.+||..+-+++..+..|++++-+++|+  ++|.+||++++.|+ |||+.+.+|+.+.+++...  ..|.+++|+| 
T Consensus       152 ~GdV~l~d~~nl~~v~~I~aH~~~lAalafs--~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~d  229 (391)
T KOG2110|consen  152 SGDVVLFDTINLQPVNTINAHKGPLAALAFS--PDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPD  229 (391)
T ss_pred             CceEEEEEcccceeeeEEEecCCceeEEEEC--CCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCC
Confidence            7999999999999999999999999999995  99999999999987 8999999999999998543  5789999999 


Q ss_pred             -cEEEEEecCCcEEEEEccCcc
Q psy7482         281 -NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       281 -~~l~~~~~dg~v~iw~~~~~~  301 (327)
                       ++|++.|+.++|.+|.++...
T Consensus       230 s~~L~~sS~TeTVHiFKL~~~~  251 (391)
T KOG2110|consen  230 SQFLAASSNTETVHIFKLEKVS  251 (391)
T ss_pred             CCeEEEecCCCeEEEEEecccc
Confidence             999999999999999998764

>KOG1538|consensus

Probab=99.88  E-value=3.8e-21  Score=158.31  Aligned_cols=236  Identities=18%  Similarity=0.261  Sum_probs=182.2

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      .++||.+.|.|++|  ||+.+|+|+.|..|.+|+.+- +-+..+ .|.+.|.|+.|+|-...|++++-. ..-+|..+..
T Consensus        48 tLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl-EG~LkY-SH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK  124 (1081)
T KOG1538|consen   48 PLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL-EGILKY-SHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQK  124 (1081)
T ss_pred             ccccccceEEEEEEccCCceeccCCCceeEEEecccc-cceeee-ccCCeeeEeecCchHHHhhhcchh-hccccChhhh
Confidence            34599999999999  999999999999999998542 222222 499999999999998899988765 5788987654


Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-----cEEE
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-----LLYA  161 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~l~  161 (327)
                      ...+.    .....+.+.+|..||++++.|-.+|+|.+-+- +++....+.-  .+....+|.+++|+|..     ..++
T Consensus       125 ~V~K~----kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~R--pgg~Nspiwsi~~~p~sg~G~~di~a  197 (1081)
T KOG1538|consen  125 SVSKH----KSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIER--PGGSNSPIWSICWNPSSGEGRNDILA  197 (1081)
T ss_pred             hHHhh----hhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeC--CCCCCCCceEEEecCCCCCCccceEE
Confidence            33221    22223899999999999999999999999864 4444333333  23345679999999964     4666


Q ss_pred             eec-CCeEEEEEecCCceee-EecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecC
Q psy7482         162 IPI-QNKAVVFSVEKAGVLQ-TLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIP  238 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~~~~-~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~  238 (327)
                      +.. ..++.+|.+. |+.+. .-...-...|+.+.++ .+++.|+.|+.+.+|. +.|-.+.++......|..++..  |
T Consensus       198 V~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~--P  273 (1081)
T KOG1538|consen  198 VADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAK--P  273 (1081)
T ss_pred             EEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEe-ecCeEEeeccccceeEEEEEEc--c
Confidence            666 6777777765 33333 3335566788999998 7899999999999997 4576777777777899999996  9


Q ss_pred             CCcEEEEecCCCeEEEEEcC
Q psy7482         239 QETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       239 ~~~~l~~~~~d~~i~i~d~~  258 (327)
                      ++++++.|+.||+|..|++.
T Consensus       274 NsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  274 NSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             CCceEEEEEccCeeehhhhH
Confidence            99999999999999999863

>KOG1007|consensus

Probab=99.88  E-value=1.4e-20  Score=139.87  Aligned_cols=221  Identities=13%  Similarity=0.200  Sum_probs=164.9

Q ss_pred             CCcEEEEEcCCC--eEEEeEEecccCCceeeEEEec-CCCEEEEEeCC-------CCEEEEEcCCCceee-------eee
Q psy7482          75 DGSIAIFRVGSW--QLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKD-------KTLRTWNLVKGRSAY-------ITN  137 (327)
Q Consensus        75 d~~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d-------g~i~iwd~~~~~~~~-------~~~  137 (327)
                      |+.|.+.+++..  ...... ..|....|+.++-+| +.+.|+++..+       -.+.||.+.......       ...
T Consensus        39 dNqVhll~~d~e~s~l~skv-f~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~  117 (370)
T KOG1007|consen   39 DNQVHLLRLDSEGSELLSKV-FFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS  117 (370)
T ss_pred             cceeEEEEecCccchhhhhh-hhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence            567777766543  333333 344444599999999 55666666442       247799886532210       011


Q ss_pred             ccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCce-eeEec------CCCceeEEEeecC--ceEEEeCCCCcE
Q psy7482         138 LSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV-LQTLK------SESKVHSVCFLNE--TTVCTGNEESAI  208 (327)
Q Consensus       138 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~-~~~~~------~~~~i~~~~~~~~--~~l~~~~~d~~i  208 (327)
                      +..  .+.+.+.|+.|.|++..+++-.++.|.+|++..+.. ...+.      +....++-+|+|.  +..+....|+++
T Consensus       118 Ldt--eavg~i~cvew~Pns~klasm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl  195 (370)
T KOG1007|consen  118 LDT--EAVGKINCVEWEPNSDKLASMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTL  195 (370)
T ss_pred             CCH--HHhCceeeEEEcCCCCeeEEeccCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcE
Confidence            111  122359999999999999998899999999987765 34333      3456788899994  566666789999


Q ss_pred             EEEEcCCCceeEEe-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-eeEEeecccCceEEEeeeC---cEE
Q psy7482         209 TAYNLTDGSHLWQI-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-HLWHIKASASRIKGLASHR---NHL  283 (327)
Q Consensus       209 ~i~d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~---~~l  283 (327)
                      ..||+++.+....+ .+|...+..+.|.| ....+|++++.||.|++||.+..+ ++.++.+|...|+++.|+|   ++|
T Consensus       196 ~~~D~RT~~~~~sI~dAHgq~vrdlDfNp-nkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLi  274 (370)
T KOG1007|consen  196 QFWDLRTMKKNNSIEDAHGQRVRDLDFNP-NKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLI  274 (370)
T ss_pred             EEEEccchhhhcchhhhhcceeeeccCCC-CceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEE
Confidence            99999998877766 46888999999974 345578899999999999998765 8899999999999999999   999


Q ss_pred             EEEecCCcEEEEEccC
Q psy7482         284 ICITSAGDLVVWELNE  299 (327)
Q Consensus       284 ~~~~~dg~v~iw~~~~  299 (327)
                      ++|+.|..|.+|-...
T Consensus       275 Ls~~SDs~V~Lsca~s  290 (370)
T KOG1007|consen  275 LSGGSDSAVNLSCASS  290 (370)
T ss_pred             EecCCCceeEEEeccc
Confidence            9999999999996543

>KOG1009|consensus

Probab=99.88  E-value=5.5e-20  Score=142.71  Aligned_cols=262  Identities=15%  Similarity=0.202  Sum_probs=187.4

Q ss_pred             cccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCe---------EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEE
Q psy7482          54 EGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQ---------LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR  123 (327)
Q Consensus        54 ~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  123 (327)
                      ..+|..+.|.+++. .|++|+.|..|++|.++.++         ....+ ..|... |+++.|+|+|.+|++|+.+|.+.
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~L-s~H~~a-VN~vRf~p~gelLASg~D~g~v~   90 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSL-SRHTRA-VNVVRFSPDGELLASGGDGGEVF   90 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecc-cCCcce-eEEEEEcCCcCeeeecCCCceEE
Confidence            45799999999776 99999999999999885432         22334 567777 99999999999999999999999


Q ss_pred             EEEcCCC--------------ceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCc
Q psy7482         124 TWNLVKG--------------RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESK  187 (327)
Q Consensus       124 iwd~~~~--------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~  187 (327)
                      +|....-              ..+.....   ..|...+..++|+|++.++++++ |+.+++||+..|+....+. |...
T Consensus        91 lWk~~~~~~~~~d~e~~~~ke~w~v~k~l---r~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~y  167 (434)
T KOG1009|consen   91 LWKQGDVRIFDADTEADLNKEKWVVKKVL---RGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHY  167 (434)
T ss_pred             EEEecCcCCccccchhhhCccceEEEEEe---cccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccc
Confidence            9987621              01111112   22455699999999999999998 9999999999999999888 8899


Q ss_pred             eeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee--------ec--ccc-------------eEEEEEEecCCCcEE
Q psy7482         188 VHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK--------AS--ASR-------------IKGLVFFSIPQETTV  243 (327)
Q Consensus       188 i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~--------~~--~~~-------------v~~~~~~~s~~~~~l  243 (327)
                      +..++|.|- .++++-+.|...+.+++...+.+....        .+  .+.             ...++|  +|+|.+|
T Consensus       168 vqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsf--TPdG~ll  245 (434)
T KOG1009|consen  168 VQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSF--TPDGSLL  245 (434)
T ss_pred             cceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhccc--CCCCcEE
Confidence            999999997 888888888877777766543322211        01  111             234455  5899998


Q ss_pred             EEecC----C-----CeEEEEEcCC-CceeEEeecccCceEEEeeeC-------------------cEEEEEecCCcEEE
Q psy7482         244 CTGNE----E-----SAITAYNLTD-GSHLWHIKASASRIKGLASHR-------------------NHLICITSAGDLVV  294 (327)
Q Consensus       244 ~~~~~----d-----~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~-------------------~~l~~~~~dg~v~i  294 (327)
                      ++.+.    +     +..++|+-.. .++...+.....+...+.|+|                   ++++.......|++
T Consensus       246 vtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyv  325 (434)
T KOG1009|consen  246 VTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYV  325 (434)
T ss_pred             EcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEE
Confidence            87532    1     2334554332 224555555555666666665                   23444445668999


Q ss_pred             EEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         295 WELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       295 w~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ||.+..   .|......-|-..|+.++|+++
T Consensus       326 ydtq~~---~P~~~v~nihy~~iTDiaws~d  353 (434)
T KOG1009|consen  326 YDTQTL---EPLAVVDNIHYSAITDIAWSDD  353 (434)
T ss_pred             eccccc---cceEEEeeeeeeeecceeecCC
Confidence            999887   4554444457788999999997

>KOG1272|consensus

Probab=99.87  E-value=5.5e-22  Score=156.27  Aligned_cols=257  Identities=11%  Similarity=0.143  Sum_probs=208.0

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA  133 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  133 (327)
                      .-.-..+.++.+|++|+.|+..|.|..+|..++++...+ .. ... |.++.|..+.++++++ ....+++|| ..|..+
T Consensus       129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei-~v-~Et-v~Dv~~LHneq~~AVA-QK~y~yvYD-~~GtEl  203 (545)
T KOG1272|consen  129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEI-NV-MET-VRDVTFLHNEQFFAVA-QKKYVYVYD-NNGTEL  203 (545)
T ss_pred             ccCCeeeeecCCccEEEecCCccceeeeecccceeeeee-eh-hhh-hhhhhhhcchHHHHhh-hhceEEEec-CCCcEE
Confidence            344578899999999999999999999999999988887 22 233 9999999888777765 557899999 457666


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEE
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITA  210 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i  210 (327)
                      ..+.....      +..+.|-|..-+|++++ .|.+..-|+.+|+.+..+. ..+.+..++-+|- ..+-+|...|+|.+
T Consensus       204 HClk~~~~------v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSl  277 (545)
T KOG1272|consen  204 HCLKRHIR------VARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSL  277 (545)
T ss_pred             eehhhcCc------hhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEe
Confidence            66555544      89999999988888887 7999999999999999998 6778888888886 77889999999999


Q ss_pred             EEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCC
Q psy7482         211 YNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAG  290 (327)
Q Consensus       211 ~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg  290 (327)
                      |.....+++..+..|.++|.++++.  ++|+|++|.+.|..++|||+++...+.++.. .-+...+++|.+-+++.+...
T Consensus       278 WSP~skePLvKiLcH~g~V~siAv~--~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~SqkglLA~~~G~  354 (545)
T KOG1272|consen  278 WSPNSKEPLVKILCHRGPVSSIAVD--RGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKGLLALSYGD  354 (545)
T ss_pred             cCCCCcchHHHHHhcCCCcceEEEC--CCCcEEeecccccceeEeeeccccccceeec-CCCccccccccccceeeecCC
Confidence            9999999999999999999999995  9999999999999999999999887777765 447788999995555666677


Q ss_pred             cEEEEEccCccC-CCceeeeecCCCCceEEEEeCC
Q psy7482         291 DLVVWELNEDVT-REPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       291 ~v~iw~~~~~~~-~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                      .|.||.=..... ....+.-....+++|..+.|.|
T Consensus       355 ~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP  389 (545)
T KOG1272|consen  355 HVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCP  389 (545)
T ss_pred             eeeeehhhhcCCCCCCcchhhhccCcccccceecc
Confidence            899995332210 1112222233456788888877

>KOG0290|consensus

Probab=99.87  E-value=1.7e-19  Score=134.25  Aligned_cols=272  Identities=11%  Similarity=0.194  Sum_probs=190.8

Q ss_pred             ccEEEEEe-----CCCEEEEecC----CCeEEEEEcc--cccccccc-ccccccEEEEEECCCCC-----eEEEecCCCc
Q psy7482          15 ASVRSVAA-----TSKLAASSGA----DETVVLYDMV--KRKQSGAL-MQHEGTITCLKFTPEGS-----HLISCSDDGS   77 (327)
Q Consensus        15 ~~v~~~~~-----~~~~l~~~~~----dg~v~~w~~~--~~~~~~~~-~~~~~~v~~~~~~~~~~-----~l~~~~~d~~   77 (327)
                      -.+.++.|     ...+||.|+.    .+.|.|-.+.  +++.+..- ..|.-+++.+.|.|+..     +||+.+ | .
T Consensus        45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~-D-~  122 (364)
T KOG0290|consen   45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS-D-F  122 (364)
T ss_pred             CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc-C-e
Confidence            34677777     3557888873    4567766554  33332211 35889999999999763     455443 4 7


Q ss_pred             EEEEEcCC--CeEE--EeE---EecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCcee-eeeeccccCccccce
Q psy7482          78 IAIFRVGS--WQLE--KLF---KKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSA-YITNLSSYGVGFENL  148 (327)
Q Consensus        78 i~iw~~~~--~~~~--~~~---~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~v  148 (327)
                      +++|.+..  .+..  ..+   +..+...|+++..|+. +.+++.+++-|-+..|||++++..- ....+-   .|...|
T Consensus       123 LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLI---AHDKEV  199 (364)
T KOG0290|consen  123 LRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLI---AHDKEV  199 (364)
T ss_pred             EEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEE---ecCcce
Confidence            99999863  2211  111   1233344699999998 7789999999999999999987320 111111   223459


Q ss_pred             EEEEEccCCc-EEEeec-CCeEEEEEecCCceeeEec----CCCceeEEEeecC--ceEEEeC-CCCcEEEEEcCCC-ce
Q psy7482         149 DSVVWSPEGL-LYAIPI-QNKAVVFSVEKAGVLQTLK----SESKVHSVCFLNE--TTVCTGN-EESAITAYNLTDG-SH  218 (327)
Q Consensus       149 ~~~~~~~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~----~~~~i~~~~~~~~--~~l~~~~-~d~~i~i~d~~~~-~~  218 (327)
                      ..++|...+. .|++.+ ||.+++||++..+.-..+-    ...+...++|+++  +++++-. ....|.+.|++.. .+
T Consensus       200 ~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tp  279 (364)
T KOG0290|consen  200 YDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTP  279 (364)
T ss_pred             eEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcc
Confidence            9999998664 556555 9999999999876444332    3567889999986  6777654 4457999999864 46


Q ss_pred             eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc------eeEEeecccCceEEEeeeC---cEEEEEecC
Q psy7482         219 LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS------HLWHIKASASRIKGLASHR---NHLICITSA  289 (327)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~------~~~~~~~~~~~v~~~~~~~---~~l~~~~~d  289 (327)
                      +.++++|.+.|+.++|.| .....|++++.|..+.+||+...-      ++..+. ..+.|+.+.|++   ..++.+.. 
T Consensus       280 va~L~~H~a~VNgIaWaP-hS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~~-  356 (364)
T KOG0290|consen  280 VARLRNHQASVNGIAWAP-HSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICFG-  356 (364)
T ss_pred             eehhhcCcccccceEecC-CCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEec-
Confidence            888999999999999986 678899999999999999987532      222333 456899999997   77777763 


Q ss_pred             CcEEE
Q psy7482         290 GDLVV  294 (327)
Q Consensus       290 g~v~i  294 (327)
                      +++.+
T Consensus       357 kklei  361 (364)
T KOG0290|consen  357 KKLEI  361 (364)
T ss_pred             CeeeE
Confidence            34433

>KOG1963|consensus

Probab=99.87  E-value=8.5e-19  Score=148.53  Aligned_cols=297  Identities=16%  Similarity=0.258  Sum_probs=207.4

Q ss_pred             EEEe--CCCEEEEecCCCeEEEEEcccccccc----ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC---CeEE
Q psy7482          19 SVAA--TSKLAASSGADETVVLYDMVKRKQSG----ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS---WQLE   89 (327)
Q Consensus        19 ~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~---~~~~   89 (327)
                      ++.+  .+++.+.. .+..+.+|+..++....    .-..|.-.+++.+++|+++++|+|..||.|.+|.--.   ....
T Consensus       165 ~I~~~~~ge~~~i~-~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t  243 (792)
T KOG1963|consen  165 SIVDNNSGEFKGIV-HMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSET  243 (792)
T ss_pred             cEEEcCCceEEEEE-EeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEecccccccccc
Confidence            3444  34444333 35568888887754211    1124777799999999999999999999999996432   1222


Q ss_pred             EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeE
Q psy7482          90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKA  168 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i  168 (327)
                      .++..=|... |.+++|+++|.+|++|+.+|.+.+|.+.+++.....++...      |..+.++||+.+.+... |+.|
T Consensus       244 ~t~lHWH~~~-V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~------I~~i~vS~ds~~~sl~~~DNqI  316 (792)
T KOG1963|consen  244 CTLLHWHHDE-VNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSP------ILHIVVSPDSDLYSLVLEDNQI  316 (792)
T ss_pred             ceEEEecccc-cceeEEecCCceEeecccceEEEEEeecCCCcccccccCCe------eEEEEEcCCCCeEEEEecCceE
Confidence            2222556666 99999999999999999999999999999985544444444      99999999999888775 9999


Q ss_pred             EEEEecCCceeeEecC------------CCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee-----------
Q psy7482         169 VVFSVEKAGVLQTLKS------------ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA-----------  224 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~~------------~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~-----------  224 (327)
                      .+....+.+....+.+            .+-.+.++++|. +.++..+..|.|.+||+.+.+.+..+..           
T Consensus       317 ~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n  396 (792)
T KOG1963|consen  317 HLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVN  396 (792)
T ss_pred             EEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcce
Confidence            9998766654444431            334567888886 8888999999999999988776655431           


Q ss_pred             cccceEEEEEEecCCCcEEEEec--------CC--CeEEEEEcCCCceeEE-----eecccCceEEEeeeC----cEEEE
Q psy7482         225 SASRIKGLVFFSIPQETTVCTGN--------EE--SAITAYNLTDGSHLWH-----IKASASRIKGLASHR----NHLIC  285 (327)
Q Consensus       225 ~~~~v~~~~~~~s~~~~~l~~~~--------~d--~~i~i~d~~~~~~~~~-----~~~~~~~v~~~~~~~----~~l~~  285 (327)
                      +...++.++..  ..|.+++|.-        .|  -.+++|.......-+.     ...|...+...++.+    ...++
T Consensus       397 ~~v~itav~~~--~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vt  474 (792)
T KOG1963|consen  397 IQVGITAVARS--RFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVT  474 (792)
T ss_pred             eEEeeeeehhh--ccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEE
Confidence            12245566653  5688888853        22  3588897665543222     236776666666555    48999


Q ss_pred             EecCCcEEEEEccCccCCCce------eeeecCCCCceEEEEeCCC
Q psy7482         286 ITSAGDLVVWELNEDVTREPQ------RVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       286 ~~~dg~v~iw~~~~~~~~~~~------~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++.||.++||-+.......+.      ......+..++++++|+.|
T Consensus       475 a~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~d  520 (792)
T KOG1963|consen  475 ASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQD  520 (792)
T ss_pred             eccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCC
Confidence            999999999999554211111      1112346778888888764

>KOG1310|consensus

Probab=99.87  E-value=3e-20  Score=149.66  Aligned_cols=207  Identities=18%  Similarity=0.280  Sum_probs=148.6

Q ss_pred             eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc-cccccEEEEEECC--CCCeEEEecCCCcEEEEE
Q psy7482           8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTP--EGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~   82 (327)
                      -.+.||++.|+|+.|  +|.+|++|+.|-.+.|||.-..++++.+. +|...|.++.|-|  +.+.+++|..|..|+++|
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfd  123 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFD  123 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEe
Confidence            355699999999999  99999999999999999998888887765 7999999999999  567889999999999999


Q ss_pred             cCCC----------eEEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeee-eec----cccCcccc
Q psy7482          83 VGSW----------QLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYI-TNL----SSYGVGFE  146 (327)
Q Consensus        83 ~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~-~~~----~~~~~~~~  146 (327)
                      +...          +....+ ..|... |..++-.|++ +.+.++++||+|+-+|++....-.. ...    .......-
T Consensus       124 l~~~~~~~~d~~~~~~~~~~-~cht~r-VKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li  201 (758)
T KOG1310|consen  124 LDSSKEGGMDHGMEETTRCW-SCHTDR-VKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI  201 (758)
T ss_pred             cccccccccccCccchhhhh-hhhhhh-hhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence            9742          222333 566776 8889999977 7899999999999999986322110 000    00000012


Q ss_pred             ceEEEEEccCC-cEEEeec-CCeEEEEEecCC--------c----------eeeEec--C---C--------CceeEEEe
Q psy7482         147 NLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKA--------G----------VLQTLK--S---E--------SKVHSVCF  193 (327)
Q Consensus       147 ~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~--------~----------~~~~~~--~---~--------~~i~~~~~  193 (327)
                      ...++..+|.. .+|++|+ +-..++||.+..        .          ++..+.  |   .        ..++-+.|
T Consensus       202 elk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtf  281 (758)
T KOG1310|consen  202 ELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTF  281 (758)
T ss_pred             eeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEE
Confidence            36789999965 5777776 889999994321        1          111111  1   0        12556788


Q ss_pred             ecC-ceEEEeCCCCcEEEEEcCCC
Q psy7482         194 LNE-TTVCTGNEESAITAYNLTDG  216 (327)
Q Consensus       194 ~~~-~~l~~~~~d~~i~i~d~~~~  216 (327)
                      +|+ ..|++.-....|+++|+..+
T Consensus       282 npNGtElLvs~~gEhVYlfdvn~~  305 (758)
T KOG1310|consen  282 NPNGTELLVSWGGEHVYLFDVNED  305 (758)
T ss_pred             CCCCcEEEEeeCCeEEEEEeecCC
Confidence            898 44555445557899988654

>KOG1963|consensus

Probab=99.87  E-value=9.3e-19  Score=148.29  Aligned_cols=286  Identities=15%  Similarity=0.225  Sum_probs=204.2

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccc--c--ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVK--R--KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~--~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      .|.-.++|.++  +++++|+|..||.|.+|.--.  +  ...+.+.-|..+|++++|+++|.+|++|+..|.+.+|.+++
T Consensus       203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T  282 (792)
T KOG1963|consen  203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET  282 (792)
T ss_pred             hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence            47776777777  999999999999999996432  1  23345666889999999999999999999999999999998


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc------CccccceEEEEEccCCc-
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY------GVGFENLDSVVWSPEGL-  158 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~-  158 (327)
                      ++  +.+ .+.-+.+|..+.++||+.+.+....|..|.+..+.+.+....+.....      ....+-.+.++++|.-+ 
T Consensus       283 ~~--kqf-LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~  359 (792)
T KOG1963|consen  283 GK--KQF-LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNS  359 (792)
T ss_pred             CC--ccc-ccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCc
Confidence            88  455 445555699999999999999999999999998755443322211111      11123367788999444 


Q ss_pred             EEEeecCCeEEEEEecCCceeeEec------CC------CceeEEEeecC-ceEEEeC--------C--CCcEEEEEcCC
Q psy7482         159 LYAIPIQNKAVVFSVEKAGVLQTLK------SE------SKVHSVCFLNE-TTVCTGN--------E--ESAITAYNLTD  215 (327)
Q Consensus       159 ~l~~~~~~~i~i~d~~~~~~~~~~~------~~------~~i~~~~~~~~-~~l~~~~--------~--d~~i~i~d~~~  215 (327)
                      .+..+..|.|.+||+.+.+.+..+.      +.      -.+++++.+-. ..+++.-        .  .-.+++|-...
T Consensus       360 ~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~  439 (792)
T KOG1963|consen  360 LVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNP  439 (792)
T ss_pred             eeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcC
Confidence            4444559999999998887766554      11      13555555555 4555532        2  33567887654


Q ss_pred             CceeEE-----eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc------eeEE----eecccCceEEEeeeC
Q psy7482         216 GSHLWQ-----IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS------HLWH----IKASASRIKGLASHR  280 (327)
Q Consensus       216 ~~~~~~-----~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~------~~~~----~~~~~~~v~~~~~~~  280 (327)
                      ...-..     ...|...+...++.+.+.....++++.||.+++|-+.+.+      ..+.    -.-|..++++++|+.
T Consensus       440 ~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~  519 (792)
T KOG1963|consen  440 NSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQ  519 (792)
T ss_pred             CcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcC
Confidence            433222     2468777777777653444489999999999999884322      1111    112678999999999


Q ss_pred             -cEEEEEecCCcEEEEEccCc
Q psy7482         281 -NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 -~~l~~~~~dg~v~iw~~~~~  300 (327)
                       ..+++.+.|++|.+||..+.
T Consensus       520 dGslla~s~~~~Itiwd~~~~  540 (792)
T KOG1963|consen  520 DGSLLAVSFDDTITIWDYDTK  540 (792)
T ss_pred             CCcEEEEecCCEEEEecCCCh
Confidence             77788888999999999883

>KOG1523|consensus

Probab=99.87  E-value=2.2e-19  Score=135.36  Aligned_cols=231  Identities=14%  Similarity=0.211  Sum_probs=174.9

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEcccc---ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc-CCC
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV-GSW   86 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~-~~~   86 (327)
                      -..+|+|.+|  |+..+|.+.....|.||.....   +..++++.|...|+.+.|+|..+.|++++.|..-++|.. ..+
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~   88 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG   88 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence            4578999999  8899999999999999987655   467889999999999999999999999999999999998 433


Q ss_pred             e--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          87 Q--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        87 ~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      +  +...+ ..+... .+++.|+|.++.+++|+.-..|.+|-++..+.-...+... ......|.++.|+|++-++++|+
T Consensus        89 ~WkptlvL-lRiNrA-At~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhik-kPirStv~sldWhpnnVLlaaGs  165 (361)
T KOG1523|consen   89 TWKPTLVL-LRINRA-ATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIK-KPIRSTVTSLDWHPNNVLLAAGS  165 (361)
T ss_pred             eeccceeE-EEeccc-eeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhC-CccccceeeeeccCCcceecccc
Confidence            3  33444 556666 9999999999999999999999999887654332211111 11123499999999999999998


Q ss_pred             -CCeEEEEEec-----C-------------CceeeEe-cCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc-eeEEe
Q psy7482         165 -QNKAVVFSVE-----K-------------AGVLQTL-KSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS-HLWQI  222 (327)
Q Consensus       165 -~~~i~i~d~~-----~-------------~~~~~~~-~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~-~~~~~  222 (327)
                       |+..++|..-     .             |+.+..+ ...+.+..+.|+|+ ..|+-.+.|..+.+-|..... .+...
T Consensus       166 ~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~  245 (361)
T KOG1523|consen  166 TDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSV  245 (361)
T ss_pred             cCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccch
Confidence             9999988642     1             2233334 25678999999998 889999999999999876654 34444


Q ss_pred             eecccceEEEEEEecCCCcEEEEecCC
Q psy7482         223 KASASRIKGLVFFSIPQETTVCTGNEE  249 (327)
Q Consensus       223 ~~~~~~v~~~~~~~s~~~~~l~~~~~d  249 (327)
                      .....+..++.|.   ....++.++.|
T Consensus       246 ~~~~lP~ls~~~i---se~~vv~ag~~  269 (361)
T KOG1523|consen  246 ATAQLPLLSVSWI---SENSVVAAGYD  269 (361)
T ss_pred             hhccCCceeeEee---cCCceeecCCC
Confidence            4444677777773   33344444444

>KOG1524|consensus

Probab=99.86  E-value=5.6e-20  Score=147.73  Aligned_cols=258  Identities=17%  Similarity=0.257  Sum_probs=187.2

Q ss_pred             cCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEE-ECC-------CCCeEEEecCCCcEEEEE
Q psy7482          12 SHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLK-FTP-------EGSHLISCSDDGSIAIFR   82 (327)
Q Consensus        12 ~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~-~~~-------~~~~l~~~~~d~~i~iw~   82 (327)
                      -|...|.|+.| ...-+...+.|..+.+|.-.+......+.-...-+.... .-+       ....|+.++.||.+.+.+
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~   91 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN   91 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence            47778888888 444444455566666665444433333322222221111 111       234788899999999987


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      - .++....+ ..|.+. +.+-.|+|+|.-|+++++||.|++|. ++|.........     ..+|.|++|.|+.+-++.
T Consensus        92 k-~~rVE~sv-~AH~~A-~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~-----~~~v~c~~W~p~S~~vl~  162 (737)
T KOG1524|consen   92 K-SARVERSI-SAHAAA-ISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQN-----EESIRCARWAPNSNSIVF  162 (737)
T ss_pred             c-cchhhhhh-hhhhhh-hhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhc-----CceeEEEEECCCCCceEE
Confidence            4 46666666 888888 99999999999999999999999998 455543322211     234999999999998888


Q ss_pred             ecCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482         163 PIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       163 ~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      +..+.+.|=.+.....+-.++ |.+-|.++.|++. +.+++|++|-..++||- .|+.+..-..|+.+|++++|.  |+ 
T Consensus       163 c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~n--pd-  238 (737)
T KOG1524|consen  163 CQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFN--PE-  238 (737)
T ss_pred             ecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhccceeeeeec--cc-
Confidence            888888887777665555555 9999999999998 89999999999999996 477888888999999999996  67 


Q ss_pred             cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEE
Q psy7482         241 TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVV  294 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~i  294 (327)
                      +.++.++. +++++           -+...+.|..++|++  ..++.|...|.+.+
T Consensus       239 ~~~~v~S~-nt~R~-----------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  239 KDYLLWSY-NTARF-----------SSPRVGSIFNLSWSADGTQATCGTSTGQLIV  282 (737)
T ss_pred             cceeeeee-eeeee-----------cCCCccceEEEEEcCCCceeeccccCceEEE
Confidence            66666654 23331           122346899999999  78888888887655

>KOG1587|consensus

Probab=99.86  E-value=9.8e-20  Score=153.25  Aligned_cols=245  Identities=15%  Similarity=0.185  Sum_probs=180.8

Q ss_pred             CCccEEEEEe---CCCEEEEecCCCeEEEEEcccccc--ccc----cccccccEEEEEECCCC--CeEEEecCCCcEEEE
Q psy7482          13 HTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQ--SGA----LMQHEGTITCLKFTPEG--SHLISCSDDGSIAIF   81 (327)
Q Consensus        13 h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~--~~~----~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iw   81 (327)
                      -...|+|+.|   +.+++|.|..+|.|.+||+..+..  ...    ...|..+++.+.|..+.  .-+++++.||.|..|
T Consensus       241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W  320 (555)
T KOG1587|consen  241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW  320 (555)
T ss_pred             cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence            4577999999   899999999999999999987755  222    23588999999998744  449999999999999


Q ss_pred             EcCCCeEE------EeEE----ecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceee--e-eeccccCccccc
Q psy7482          82 RVGSWQLE------KLFK----KAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAY--I-TNLSSYGVGFEN  147 (327)
Q Consensus        82 ~~~~~~~~------~~~~----~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~--~-~~~~~~~~~~~~  147 (327)
                      +++.-...      ....    .......+++++|.+ +...++.|+.+|.|.--+-...+...  . ........|.++
T Consensus       321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~  400 (555)
T KOG1587|consen  321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP  400 (555)
T ss_pred             eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence            88643221      1110    112223488999998 56789999999988774432222111  1 112234556778


Q ss_pred             eEEEEEccCCc-EEEeecCCeEEEEEec-CCceeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCC--ceeE
Q psy7482         148 LDSVVWSPEGL-LYAIPIQNKAVVFSVE-KAGVLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDG--SHLW  220 (327)
Q Consensus       148 v~~~~~~~~~~-~l~~~~~~~i~i~d~~-~~~~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~--~~~~  220 (327)
                      |.++.++|=+. ++.+++|.++++|... ...++..+. +...+++++|||-  ..++++..+|.+.+||+...  .++.
T Consensus       401 v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~  480 (555)
T KOG1587|consen  401 VYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVL  480 (555)
T ss_pred             eEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcc
Confidence            99999999664 5555669999999987 666777666 5667999999997  78999999999999998654  3455


Q ss_pred             EeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         221 QIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       221 ~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      +.+.+....+.+.+  ++.|+.|++|...|.+.+|++..
T Consensus       481 s~~~~~~~l~~~~~--s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  481 SQKVCSPALTRVRW--SPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             cccccccccceeec--CCCCcEEEEecCCCcEEEEEcCc
Confidence            55555555566666  47899999999999999999864

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.86  E-value=1e-19  Score=153.68  Aligned_cols=231  Identities=16%  Similarity=0.160  Sum_probs=161.2

Q ss_pred             CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---CcEEEEEcCCCeEEEeEEecccCCceeeEEEecC
Q psy7482          33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS  109 (327)
Q Consensus        33 dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~  109 (327)
                      +..|.+||..... .+.+..|...+...+|+|||+.|+.++.+   ..|++||+.+++.....  ...+. ...++|+||
T Consensus       183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~--~~~g~-~~~~~wSPD  258 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVA--SFRGH-NGAPAFSPD  258 (429)
T ss_pred             eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEe--cCCCc-cCceeECCC
Confidence            4689999986444 55667788889999999999999887654   46999999887643322  12222 456899999


Q ss_pred             CCEEEEEe-CCCCEEEE--EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCC-ceeeEec
Q psy7482         110 GKLALSVG-KDKTLRTW--NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKA-GVLQTLK  183 (327)
Q Consensus       110 ~~~l~~~~-~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~-~~~~~~~  183 (327)
                      |+.|+.+. .+|.+.||  |+.+++......   .   ...+....|+|||+.++..+  ++...+|++... .....+.
T Consensus       259 G~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~---~---~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~  332 (429)
T PRK01742        259 GSRLAFASSKDGVLNIYVMGANGGTPSQLTS---G---AGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVG  332 (429)
T ss_pred             CCEEEEEEecCCcEEEEEEECCCCCeEeecc---C---CCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEec
Confidence            99888764 67876655  665555432221   1   12377899999999777654  577788876532 2223333


Q ss_pred             CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc--CCC
Q psy7482         184 SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL--TDG  260 (327)
Q Consensus       184 ~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~--~~~  260 (327)
                      +..  ....|+|+ +.++..+.++ +.+||+.+++.......+  ....+.|  +|+|++|+.++.++...+|++  .++
T Consensus       333 ~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~--sPdG~~i~~~s~~g~~~~l~~~~~~G  405 (429)
T PRK01742        333 GRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSI--SPNGIMIIYSSTQGLGKVLQLVSADG  405 (429)
T ss_pred             CCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceE--CCCCCEEEEEEcCCCceEEEEEECCC
Confidence            332  45789999 6676666654 666999888654322222  2345677  499999999999998888875  367


Q ss_pred             ceeEEeecccCceEEEeeeC
Q psy7482         261 SHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       261 ~~~~~~~~~~~~v~~~~~~~  280 (327)
                      .....+..|.+.+...+|+|
T Consensus       406 ~~~~~l~~~~g~~~~p~wsp  425 (429)
T PRK01742        406 RFKARLPGSDGQVKFPAWSP  425 (429)
T ss_pred             CceEEccCCCCCCCCcccCC
Confidence            78888888888899999998

>KOG0642|consensus

Probab=99.86  E-value=8e-21  Score=153.14  Aligned_cols=247  Identities=19%  Similarity=0.234  Sum_probs=185.9

Q ss_pred             ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC--------CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC
Q psy7482          49 ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS--------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK  120 (327)
Q Consensus        49 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  120 (327)
                      ++..|...|++++|.|-...|++++.||.+++|++..        -+++.++ .+|.++ |.|+++.+++..+++|+.||
T Consensus       289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tf-raH~gP-Vl~v~v~~n~~~~ysgg~Dg  366 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTF-RAHEGP-VLCVVVPSNGEHCYSGGIDG  366 (577)
T ss_pred             eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEE-ecccCc-eEEEEecCCceEEEeeccCc
Confidence            4556888999999999999999999999999999932        2456677 888888 99999999999999999999


Q ss_pred             CEEEEEcCCCceee-----eeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec---CCCceeEE
Q psy7482         121 TLRTWNLVKGRSAY-----ITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSV  191 (327)
Q Consensus       121 ~i~iwd~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~  191 (327)
                      +|+.|++....-..     ..-.....+|.+.++.+++++....|+.++ ||+++.|+.....+ .++.   ..+...++
T Consensus       367 ~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsv  445 (577)
T KOG0642|consen  367 TIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSV  445 (577)
T ss_pred             eeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceE
Confidence            99999765211100     000112245677799999999887787776 99999999877666 3333   34445566


Q ss_pred             EeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeec-------ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         192 CFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKAS-------ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       192 ~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      .+-..  ...++...-+.-.++++.....+..+...       ...+..+..+  |...+.+++..|+.|+++|..++.+
T Consensus       446 d~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~--~~~~~~~~~hed~~Ir~~dn~~~~~  523 (577)
T KOG0642|consen  446 DRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSH--PTADITFTAHEDRSIRFFDNKTGKI  523 (577)
T ss_pred             eeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEec--CCCCeeEecccCCceeccccccccc
Confidence            66433  23333333344444455444444433211       1234556665  7889999999999999999999999


Q ss_pred             eEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         263 LWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       263 ~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++....|...++++++.|  .+|++++.||.+++|.+...
T Consensus       524 l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k  563 (577)
T KOG0642|consen  524 LHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVK  563 (577)
T ss_pred             chheeeccceecceeecCCCceEEeecCCceeehhhccch
Confidence            999999999999999999  99999999999999999776

>KOG4227|consensus

Probab=99.86  E-value=3e-19  Score=138.42  Aligned_cols=246  Identities=11%  Similarity=0.164  Sum_probs=188.3

Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC------CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG------SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT  121 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  121 (327)
                      +.+.+|.+.|+++.|+.++++|++|+.|..+++|+++      ..+++......|... |.|++|....+.+++|+.+++
T Consensus        50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SN-IF~L~F~~~N~~~~SG~~~~~  128 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSN-IFSLEFDLENRFLYSGERWGT  128 (609)
T ss_pred             hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccc-eEEEEEccCCeeEecCCCcce
Confidence            3456899999999999999999999999999999985      345666653445456 999999999999999999999


Q ss_pred             EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCc-ee---eEecCCCceeEEEeecC
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAG-VL---QTLKSESKVHSVCFLNE  196 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~-~~---~~~~~~~~i~~~~~~~~  196 (327)
                      |...|+++.+.+........   .+.|..+..+|..+.|++.+ ++.|.+||.+... ..   ..-........+.|+|.
T Consensus       129 VI~HDiEt~qsi~V~~~~~~---~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~  205 (609)
T KOG4227|consen  129 VIKHDIETKQSIYVANENNN---RGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPE  205 (609)
T ss_pred             eEeeecccceeeeeecccCc---ccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCC
Confidence            99999999888776654443   34599999999888888887 8999999998755 22   22235677889999997


Q ss_pred             --ceEEEeCCCCcEEEEEcCCCce-eEE------eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce-eEEe
Q psy7482         197 --TTVCTGNEESAITAYNLTDGSH-LWQ------IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH-LWHI  266 (327)
Q Consensus       197 --~~l~~~~~d~~i~i~d~~~~~~-~~~------~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~  266 (327)
                        .++++.+..+-+-+||.+..+. +..      ++.....-.+..|  +|+|..+.+--....-.+||+.+..+ +..+
T Consensus       206 ~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~--~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~  283 (609)
T KOG4227|consen  206 TPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLW--SPSGNQFMSIRRGKCPLYFDFISQRCFVLKS  283 (609)
T ss_pred             CceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheee--CCCCCeehhhhccCCCEEeeeecccceeEec
Confidence              7889999999999999876432 211      1111112245667  48999888877777777888877553 3333


Q ss_pred             eccc-------CceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         267 KASA-------SRIKGLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       267 ~~~~-------~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                      . |+       ..+.+++|.. .-+++|+.+=.|++|.+...
T Consensus       284 D-~N~~GY~N~~T~KS~~F~~D~~v~tGSD~~~i~~WklP~~  324 (609)
T KOG4227|consen  284 D-HNPNGYCNIKTIKSMTFIDDYTVATGSDHWGIHIWKLPRA  324 (609)
T ss_pred             c-CCCCcceeeeeeeeeeeecceeeeccCcccceEEEecCCC
Confidence            3 32       2567788888 77999999999999998765

>KOG1188|consensus

Probab=99.85  E-value=8.8e-20  Score=138.62  Aligned_cols=196  Identities=16%  Similarity=0.230  Sum_probs=159.3

Q ss_pred             CeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc
Q psy7482          67 SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG  144 (327)
Q Consensus        67 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  144 (327)
                      ..+|++...|.|++||..+++.+..+ .++... ++.+.|..  ....+.+++.||+|++||++.......+......  
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~f-k~~~~~-~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~--  116 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEF-KGPPAT-TNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQS--  116 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhhee-cCCCCc-ccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCC--
Confidence            56889999999999999999999999 888887 89999987  4678999999999999999987766655554442  


Q ss_pred             ccceEEEEEccCCcEEEeec-----CCeEEEEEecCCce-eeEec--CCCceeEEEeecC--ceEEEeCCCCcEEEEEcC
Q psy7482         145 FENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKAGV-LQTLK--SESKVHSVCFLNE--TTVCTGNEESAITAYNLT  214 (327)
Q Consensus       145 ~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~~~-~~~~~--~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~  214 (327)
                      ..+..+++....++++++|+     +-.+.+||++..+. +..+.  |...|+++.|+|.  ++|++|+.||.|.+||++
T Consensus       117 ~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~  196 (376)
T KOG1188|consen  117 GTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK  196 (376)
T ss_pred             CCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence            23477888877888999885     45799999998776 66665  8999999999997  899999999999999997


Q ss_pred             CCce---eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482         215 DGSH---LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       215 ~~~~---~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  267 (327)
                      ....   +...-.|...|..+.|. ++.-+.+.+-+......+|+++.+.+...+.
T Consensus       197 ~d~EeDaL~~viN~~sSI~~igw~-~~~ykrI~clTH~Etf~~~ele~~~~~~~~~  251 (376)
T KOG1188|consen  197 KDNEEDALLHVINHGSSIHLIGWL-SKKYKRIMCLTHMETFAIYELEDGSEETWLE  251 (376)
T ss_pred             CCcchhhHHHhhcccceeeeeeee-cCCcceEEEEEccCceeEEEccCCChhhccc
Confidence            5432   22233466779999997 3555679999999999999999887554443

>KOG0303|consensus

Probab=99.85  E-value=2.5e-19  Score=138.75  Aligned_cols=226  Identities=14%  Similarity=0.177  Sum_probs=165.3

Q ss_pred             ecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeee--ccccCccccceEEEEEccCC-cEEEe-ecCCeE
Q psy7482          94 KAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITN--LSSYGVGFENLDSVVWSPEG-LLYAI-PIQNKA  168 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~-~~l~~-~~~~~i  168 (327)
                      .+|.+. |..++|+| +...+++|++|.+|.+|++..+-......  ......|...|--++|+|.. +.|++ |+|+.|
T Consensus        78 ~GHt~~-vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v  156 (472)
T KOG0303|consen   78 CGHTAP-VLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV  156 (472)
T ss_pred             cCcccc-ccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE
Confidence            678887 99999999 77889999999999999987654322221  11223456669999999965 34444 459999


Q ss_pred             EEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccc-eEEEEEEecCCCcEEEEe
Q psy7482         169 VVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASR-IKGLVFFSIPQETTVCTG  246 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-v~~~~~~~s~~~~~l~~~  246 (327)
                      .+|++.+++.+.++.|...|.+++|+.| +++++.+.|..|++||.++++.+..-.+|.+. -..+.|.  .+|..+.+|
T Consensus       157 ~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl--~~g~i~tTG  234 (472)
T KOG0303|consen  157 SIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFL--ASGKIFTTG  234 (472)
T ss_pred             EEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEe--ccCceeeec
Confidence            9999999999999999999999999999 89999999999999999999999988888763 2334443  678855554


Q ss_pred             c---CCCeEEEEEcCCCc---eeEEeecccCceEEEeeeC--cEEE-EEecCCcEEEEEccCccCCCceeeeecCCCCce
Q psy7482         247 N---EESAITAYNLTDGS---HLWHIKASASRIKGLASHR--NHLI-CITSAGDLVVWELNEDVTREPQRVSATNDGCRF  317 (327)
Q Consensus       247 ~---~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~--~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i  317 (327)
                      -   .+.++.+||..+-+   .+.++...+ .|.---|.+  .++. +|-.|+.||-|++.... .....+..+....+-
T Consensus       235 fsr~seRq~aLwdp~nl~eP~~~~elDtSn-Gvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~-P~~hyln~f~S~epQ  312 (472)
T KOG0303|consen  235 FSRMSERQIALWDPNNLEEPIALQELDTSN-GVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP-PFVHYLNTFSSKEPQ  312 (472)
T ss_pred             cccccccceeccCcccccCcceeEEeccCC-ceEEeeecCCCCEEEEEecCCcceEEEEecCCC-ceeEEecccccCCcc
Confidence            3   46789999977654   344555444 343334555  4444 45579999999998872 123445555555555


Q ss_pred             EEEEeCC
Q psy7482         318 TCLAIRP  324 (327)
Q Consensus       318 ~~l~~~p  324 (327)
                      ..+.|.|
T Consensus       313 RG~g~mP  319 (472)
T KOG0303|consen  313 RGMGFMP  319 (472)
T ss_pred             ccccccc
Confidence            5666655

>KOG1517|consensus

Probab=99.84  E-value=7.2e-19  Score=151.82  Aligned_cols=267  Identities=16%  Similarity=0.192  Sum_probs=185.5

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecc-cCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCCCc-
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH-KGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGR-  131 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~-  131 (327)
                      +-..+.|+|-...++++...-.|++||.+.++....|..+. ....|+.+.+-.  |..++++|+.||.|+||+-.... 
T Consensus      1066 ~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~ 1145 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW 1145 (1387)
T ss_pred             CCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccccc
Confidence            45678899988889999877899999999998887773222 122388888876  56789999999999999743321 


Q ss_pred             -eee-eeec---ccc-CccccceEEEEEccCCc-EEEeecCCeEEEEEecCCceeeEec--CCCceeEEEeecC--ceEE
Q psy7482         132 -SAY-ITNL---SSY-GVGFENLDSVVWSPEGL-LYAIPIQNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE--TTVC  200 (327)
Q Consensus       132 -~~~-~~~~---~~~-~~~~~~v~~~~~~~~~~-~l~~~~~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~--~~l~  200 (327)
                       ... ....   ... ....+.-.-+.|..... ++++|.-..|+|||.........+.  ....++++.-+-.  +.++
T Consensus      1146 ~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~ 1225 (1387)
T KOG1517|consen 1146 KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIA 1225 (1387)
T ss_pred             CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEE
Confidence             111 1111   111 00011123456766544 4555557899999999888888877  4556776665443  7899


Q ss_pred             EeCCCCcEEEEEcCCCc---eeEEeeecccc--eEEEEEEecCCCc-EEEEecCCCeEEEEEcCCCcee--EEeeccc--
Q psy7482         201 TGNEESAITAYNLTDGS---HLWQIKASASR--IKGLVFFSIPQET-TVCTGNEESAITAYNLTDGSHL--WHIKASA--  270 (327)
Q Consensus       201 ~~~~d~~i~i~d~~~~~---~~~~~~~~~~~--v~~~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~--  270 (327)
                      +|..||.|++||.+...   .+...+.|...  |..+.+.  +.|- .|++|+.||.|++||++.....  .++..|-  
T Consensus      1226 AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq--~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~y 1303 (1387)
T KOG1517|consen 1226 AGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQ--RQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEY 1303 (1387)
T ss_pred             EeecCCceEEeecccCCccccceeecccCCcccceeEEee--cCCCcceeeeccCCeEEEEecccCcccccceeeecccc
Confidence            99999999999987654   36677888877  9999886  4443 5999999999999999874322  2233332  


Q ss_pred             C-ceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeee--ecCCCCceEEEEeCCC
Q psy7482         271 S-RIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVS--ATNDGCRFTCLAIRPP  325 (327)
Q Consensus       271 ~-~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~--~~~~~~~i~~l~~~p~  325 (327)
                      + ..+++..++  ..+|+|+. +.|+||++........+.-.  .......+.||+|||-
T Consensus      1304 Gs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~ 1362 (1387)
T KOG1517|consen 1304 GSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPH 1362 (1387)
T ss_pred             CccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecch
Confidence            3 589999999  88999988 99999999887322222111  1123456899999983

>KOG2111|consensus

Probab=99.83  E-value=2.3e-17  Score=124.57  Aligned_cols=231  Identities=17%  Similarity=0.273  Sum_probs=169.3

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC-ceeeEEEecCCCEEEEEe-CC------CCEEEEEc
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT-AVNHISIHPSGKLALSVG-KD------KTLRTWNL  127 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~d------g~i~iwd~  127 (327)
                      ...+++|+.|...+++|..+| .+||+.+-.+..... ..+.+. .+..+-|  ..++|+..+ .+      ..+.|||-
T Consensus         7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r-~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD   82 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASR-QFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDD   82 (346)
T ss_pred             ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhh-ccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEec
Confidence            345599999999999888776 899998754332222 111111 1222222  244554433 22      46999996


Q ss_pred             CCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEec-CCceeeEecC---CCceeEEEeecC-ceEEE-
Q psy7482         128 VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVE-KAGVLQTLKS---ESKVHSVCFLNE-TTVCT-  201 (327)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~-~~~~~~~~~~---~~~i~~~~~~~~-~~l~~-  201 (327)
                      ...+++..+.+...      |.++.+.++  .+++..++.|++|... +.+.+..+..   +....+++-..+ .+|+. 
T Consensus        83 ~k~~~i~el~f~~~------I~~V~l~r~--riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafP  154 (346)
T KOG2111|consen   83 LKERCIIELSFNSE------IKAVKLRRD--RIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFP  154 (346)
T ss_pred             ccCcEEEEEEeccc------eeeEEEcCC--eEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcC
Confidence            66777666666665      999999865  6777889999999987 5566666662   333333333333 34443 


Q ss_pred             eCCCCcEEEEEcCCCce--eEEeeecccceEEEEEEecCCCcEEEEecCCCe-EEEEEcCCCceeEEeecc--cCceEEE
Q psy7482         202 GNEESAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQETTVCTGNEESA-ITAYNLTDGSHLWHIKAS--ASRIKGL  276 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~--~~~v~~~  276 (327)
                      |..-|.|.+-|+...+.  ...+.+|...|.+++..  -+|..+|++|..|+ |+|||..+|+++.+++..  ...|+++
T Consensus       155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln--~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~i  232 (346)
T KOG2111|consen  155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALN--LQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCI  232 (346)
T ss_pred             CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEc--CCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEE
Confidence            55679999999987655  46789999999999995  89999999999998 899999999999998743  3579999


Q ss_pred             eeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         277 ASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       277 ~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +|+|  .+||++|+.|+|.|+.+...
T Consensus       233 aFSp~~s~LavsSdKgTlHiF~l~~~  258 (346)
T KOG2111|consen  233 AFSPNSSWLAVSSDKGTLHIFSLRDT  258 (346)
T ss_pred             EeCCCccEEEEEcCCCeEEEEEeecC
Confidence            9999  99999999999999999875

>KOG0771|consensus

Probab=99.83  E-value=3.3e-19  Score=139.20  Aligned_cols=194  Identities=18%  Similarity=0.267  Sum_probs=153.3

Q ss_pred             EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeee
Q psy7482          58 TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN  137 (327)
Q Consensus        58 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  137 (327)
                      .+++|+++|..|++++.||.+++|+..+...+... ..|... |.++.|+|||+.|++.+.| ..++|+.+++..+....
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e-~~~~~e-V~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t  224 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEE-IAHHAE-VKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT  224 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhh-HhhcCc-cccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC
Confidence            67999999999999999999999998877777666 677777 9999999999999999999 89999999996655443


Q ss_pred             ccccCccccceEEEEEccCC---cEEEee--c-CCeEEEEEecCCce------eeEecCCCceeEEEeecC-ceEEEeCC
Q psy7482         138 LSSYGVGFENLDSVVWSPEG---LLYAIP--I-QNKAVVFSVEKAGV------LQTLKSESKVHSVCFLNE-TTVCTGNE  204 (327)
Q Consensus       138 ~~~~~~~~~~v~~~~~~~~~---~~l~~~--~-~~~i~i~d~~~~~~------~~~~~~~~~i~~~~~~~~-~~l~~~~~  204 (327)
                      ....   ......+.|+.++   .+++.+  . .+.++.||+...+.      .+.+.....|.+++.+++ ++++.|+.
T Consensus       225 ~~~k---~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~  301 (398)
T KOG0771|consen  225 PFSK---DEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTM  301 (398)
T ss_pred             Cccc---chhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEecc
Confidence            2222   2336778888776   333333  2 46677776643222      112224568999999999 78999999


Q ss_pred             CCcEEEEEcCCCceeEEe-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         205 ESAITAYNLTDGSHLWQI-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       205 d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      ||.|.+++..+.+.++-. +.|...|+.+.|+  |+.+++++-+.|..+.+..+.-
T Consensus       302 dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~--Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  302 DGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFS--PDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             CCcEEEEEeceeeeeEeehhhheeeeeeEEEc--CCcCcccccccCCceeEEEEee
Confidence            999999999988876655 5799999999995  9999999999998888887653

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.83  E-value=3.1e-18  Score=144.77  Aligned_cols=232  Identities=12%  Similarity=0.100  Sum_probs=156.1

Q ss_pred             CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---CCEEEEEcCCCceeeeeeccccCccccceEEE
Q psy7482          75 DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSAYITNLSSYGVGFENLDSV  151 (327)
Q Consensus        75 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  151 (327)
                      +..|.+||..... ...+ ..+... +....|+|||+.|+.++.+   ..|++||+.+++..........      ...+
T Consensus       183 ~~~i~i~d~dg~~-~~~l-t~~~~~-v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~------~~~~  253 (429)
T PRK01742        183 PYEVRVADYDGFN-QFIV-NRSSQP-LMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH------NGAP  253 (429)
T ss_pred             eEEEEEECCCCCC-ceEe-ccCCCc-cccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc------cCce
Confidence            4689999987655 3444 455555 9999999999999887654   3699999988765443333322      4468


Q ss_pred             EEccCCcEEEeec--CCeEE--EEEecCCceeeEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCc-eeEEeee
Q psy7482         152 VWSPEGLLYAIPI--QNKAV--VFSVEKAGVLQTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGS-HLWQIKA  224 (327)
Q Consensus       152 ~~~~~~~~l~~~~--~~~i~--i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~-~~~~~~~  224 (327)
                      +|+|||+.|+.+.  +|.+.  +||+.+++......+...+....|+|| ..++ ++..++...+|++.... ....+ .
T Consensus       254 ~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~  332 (429)
T PRK01742        254 AFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-G  332 (429)
T ss_pred             eECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-c
Confidence            9999999887763  66554  556666654443336667888999999 4454 44567888888765322 22222 3


Q ss_pred             cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccC
Q psy7482         225 SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVT  302 (327)
Q Consensus       225 ~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~  302 (327)
                      +..  ....|  +|+|++|+..+.++ +.+||+.+++.......+  ....+.|+|  ++|+.++.+|...+|.+.....
T Consensus       333 ~~~--~~~~~--SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G  405 (429)
T PRK01742        333 GRG--YSAQI--SADGKTLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSADG  405 (429)
T ss_pred             CCC--CCccC--CCCCCEEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEECCC
Confidence            333  34667  59999998887765 556999888754332222  235678999  8899999999988888643211


Q ss_pred             CCceeeeecCCCCceEEEEeCCC
Q psy7482         303 REPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       303 ~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ...+.+.  .+.+.+...+|+|-
T Consensus       406 ~~~~~l~--~~~g~~~~p~wsp~  426 (429)
T PRK01742        406 RFKARLP--GSDGQVKFPAWSPY  426 (429)
T ss_pred             CceEEcc--CCCCCCCCcccCCC
Confidence            2333332  34567889999984

>KOG1523|consensus

Probab=99.82  E-value=5.5e-18  Score=127.96  Aligned_cols=232  Identities=13%  Similarity=0.203  Sum_probs=177.2

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC---eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEc-C
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW---QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL-V  128 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~-~  128 (327)
                      ...+|+|.+|++|...+|.+.....|.||.....   +..+++ ..|... |+.++|+|..+.|++++.|..-++|.. .
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htl-s~Hd~~-vtgvdWap~snrIvtcs~drnayVw~~~~   86 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTL-SEHDKI-VTGVDWAPKSNRIVTCSHDRNAYVWTQPS   86 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceeh-hhhCcc-eeEEeecCCCCceeEccCCCCccccccCC
Confidence            4578999999999999999999999999988654   456677 778877 999999999999999999999999998 4


Q ss_pred             CCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeE---e--cCCCceeEEEeecC-ceEEE
Q psy7482         129 KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQT---L--KSESKVHSVCFLNE-TTVCT  201 (327)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~---~--~~~~~i~~~~~~~~-~~l~~  201 (327)
                      .++......+...   ....+++.|+|.++.|++|+ ...|.++-++....-..   +  ...+.|+++.|+|+ -++++
T Consensus        87 ~~~WkptlvLlRi---NrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa  163 (361)
T KOG1523|consen   87 GGTWKPTLVLLRI---NRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA  163 (361)
T ss_pred             CCeeccceeEEEe---ccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc
Confidence            4554444333333   23489999999999999998 66777877765543321   2  25678999999999 57888


Q ss_pred             eCCCCcEEEEEcCC------------------CceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-e
Q psy7482         202 GNEESAITAYNLTD------------------GSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-H  262 (327)
Q Consensus       202 ~~~d~~i~i~d~~~------------------~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~  262 (327)
                      |+.|+..++|..--                  |+.+.++....+.+..+.|  +|.|..|+-.+.|..+.+-|..... .
T Consensus       164 Gs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~f--s~sG~~lawv~Hds~v~~~da~~p~~~  241 (361)
T KOG1523|consen  164 GSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLF--SPSGNRLAWVGHDSTVSFVDAAGPSER  241 (361)
T ss_pred             cccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEe--CCCCCEeeEecCCCceEEeecCCCchh
Confidence            99999999996421                  1233344455678999999  4899999999999999999987665 3


Q ss_pred             eEEeecccCceEEEeeeC-cEEEEEecCCc
Q psy7482         263 LWHIKASASRIKGLASHR-NHLICITSAGD  291 (327)
Q Consensus       263 ~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~  291 (327)
                      +..+....-+..++.|-. +.++.++.|..
T Consensus       242 v~~~~~~~lP~ls~~~ise~~vv~ag~~c~  271 (361)
T KOG1523|consen  242 VQSVATAQLPLLSVSWISENSVVAAGYDCG  271 (361)
T ss_pred             ccchhhccCCceeeEeecCCceeecCCCCC
Confidence            444444446777777765 66666666633

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.82  E-value=7.6e-17  Score=132.15  Aligned_cols=294  Identities=13%  Similarity=0.122  Sum_probs=188.3

Q ss_pred             CEE-EEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceee
Q psy7482          25 KLA-ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH  103 (327)
Q Consensus        25 ~~l-~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~  103 (327)
                      +++ ++-..+|.|.+.|..+.+.+..+......-..+.|+|||+++++++.||.|.++|+.+++.+..+..+..   ..+
T Consensus         6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~---~~~   82 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN---PRG   82 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE---EEE
T ss_pred             cEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC---cce
Confidence            444 4556789999999999999998886554445578999999999999999999999999999998844333   788


Q ss_pred             EEEecCCCEEEEEe-CCCCEEEEEcCCCceeeeeeccccCc--cccceEEEEEccCCcEEEeec--CCeEEEEEecCCce
Q psy7482         104 ISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITNLSSYGV--GFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGV  178 (327)
Q Consensus       104 ~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~  178 (327)
                      +++++||++++++. .++.+.++|.++.+.+..++......  ....+..+..+|....+++..  .+.|.+.|....+.
T Consensus        83 i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~  162 (369)
T PF02239_consen   83 IAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKN  162 (369)
T ss_dssp             EEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSC
T ss_pred             EEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccc
Confidence            99999999998776 58999999999998888776554321  234577888888888666654  58898889877654


Q ss_pred             e--eEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCceeEEee----ecccceEEEE-------EEecCCCcEE
Q psy7482         179 L--QTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGSHLWQIK----ASASRIKGLV-------FFSIPQETTV  243 (327)
Q Consensus       179 ~--~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~~~~~~~----~~~~~v~~~~-------~~~s~~~~~l  243 (327)
                      +  ..+..........|+|+ .+++ +...++.+-++|.++++.+..+.    .|..+...+-       |..+..+...
T Consensus       163 ~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~  242 (369)
T PF02239_consen  163 LKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFA  242 (369)
T ss_dssp             EEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSE
T ss_pred             cceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeecccccee
Confidence            3  34456677889999999 5544 45677899999999988776553    2444444332       2111122222


Q ss_pred             EEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEE----ecCCcEEEEEccCccCCCceeeeecCCCCce
Q psy7482         244 CTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICI----TSAGDLVVWELNEDVTREPQRVSATNDGCRF  317 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~----~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i  317 (327)
                      ++.-....+.+||..+.+.+.++.....+ .-+..+|  +++.+.    ...+.|.++|..+..  ....+. ...+.++
T Consensus       243 ~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~--~~~~i~-~~~~~~~  318 (369)
T PF02239_consen  243 IPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLK--VVKTIT-PGPGKRV  318 (369)
T ss_dssp             EEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTE--EEE-HH-HHHT--E
T ss_pred             cccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcc--eeEEEe-ccCCCcE
Confidence            22222234556888888899999887666 7778888  777777    455789999998872  111221 1233358


Q ss_pred             EEEEeCCC
Q psy7482         318 TCLAIRPP  325 (327)
Q Consensus       318 ~~l~~~p~  325 (327)
                      ..++|+++
T Consensus       319 ~h~ef~~d  326 (369)
T PF02239_consen  319 VHMEFNPD  326 (369)
T ss_dssp             EEEEE-TT
T ss_pred             eccEECCC
Confidence            88888876

...

>KOG0644|consensus

Probab=99.82  E-value=3.5e-20  Score=156.07  Aligned_cols=260  Identities=15%  Similarity=0.265  Sum_probs=199.9

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      +.+..+.+|-..|.|+.|...|.++++|+.|..++||..+++.+.... .+|.+. |+.++.+.+...+++++.|..|++
T Consensus       181 k~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~-rGhs~d-itdlavs~~n~~iaaaS~D~vIrv  258 (1113)
T KOG0644|consen  181 KNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASC-RGHSGD-ITDLAVSSNNTMIAAASNDKVIRV  258 (1113)
T ss_pred             HHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccC-CCCccc-cchhccchhhhhhhhcccCceEEE
Confidence            445667789999999999999999999999999999999999999998 999998 999999999889999999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeE-----ecCCCceeEEEeecC-ce
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQT-----LKSESKVHSVCFLNE-TT  198 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~-----~~~~~~i~~~~~~~~-~~  198 (327)
                      |.+..+.++..+..     |++.|++++|+|-.   .++.||++++||.+-.-.+..     +.....+.++.|... ..
T Consensus       259 Wrl~~~~pvsvLrg-----htgavtaiafsP~~---sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~  330 (1113)
T KOG0644|consen  259 WRLPDGAPVSVLRG-----HTGAVTAIAFSPRA---SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDR  330 (1113)
T ss_pred             EecCCCchHHHHhc-----cccceeeeccCccc---cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccc
Confidence            99999988665433     34569999999965   444599999999882111111     113445666777666 67


Q ss_pred             EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482         199 VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      +++++.|+.-..|.+....      .+...+.-+... +.-..+.+++-.+-.+.+|++.+|.+++.+.+|...+..+.+
T Consensus       331 f~Tgs~d~ea~n~e~~~l~------~~~~~lif~t~s-sd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~  403 (1113)
T KOG0644|consen  331 FLTGSRDGEARNHEFEQLA------WRSNLLIFVTRS-SDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDV  403 (1113)
T ss_pred             cccccCCcccccchhhHhh------hhccceEEEecc-ccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeee
Confidence            8899999988888754321      122222222221 112245666777888999999999999999999999999999


Q ss_pred             eC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         279 HR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       279 ~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +|   ....+++.||...|||+-.+   .+.......| ..+..-+|+++
T Consensus       404 Hpfn~ri~msag~dgst~iwdi~eg---~pik~y~~gh-~kl~d~kFSqd  449 (1113)
T KOG0644|consen  404 HPFNPRIAMSAGYDGSTIIWDIWEG---IPIKHYFIGH-GKLVDGKFSQD  449 (1113)
T ss_pred             cCCCcHhhhhccCCCceEeeecccC---Ccceeeeccc-ceeeccccCCC
Confidence            99   67778999999999999998   4544444443 45666688776

>KOG4497|consensus

Probab=99.82  E-value=3.3e-17  Score=124.44  Aligned_cols=293  Identities=14%  Similarity=0.185  Sum_probs=199.9

Q ss_pred             ccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEE-ecCCCcEEEEEcCCCeEEEeEE
Q psy7482          15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLIS-CSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        15 ~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      ++..+++.+|+++|+++.- .+.|-|..+.+..+.+.. -..|.-+.|..|..+++. ...++.|.+|++...+-...+ 
T Consensus        11 ~~~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c-ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckI-   87 (447)
T KOG4497|consen   11 NPFCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC-LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKI-   87 (447)
T ss_pred             CCceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH-HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEe-
Confidence            3444556699999999855 788999888877666553 456788999988877654 566889999999988888887 


Q ss_pred             ecccCCceeeEEEecCCCE-EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-----
Q psy7482          94 KAHKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-----  165 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-----  165 (327)
                      .....+ +.++.|+|||+. |.+...+-.|.+|.+.+.+.....-....      +..++|+|+|++.+..+  |     
T Consensus        88 deg~ag-ls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~------~kg~~f~~dg~f~ai~sRrDCkdyv  160 (447)
T KOG4497|consen   88 DEGQAG-LSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTN------VKGYAFHPDGQFCAILSRRDCKDYV  160 (447)
T ss_pred             ccCCCc-ceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccC------ceeEEECCCCceeeeeecccHHHHH
Confidence            444555 999999999955 55566688999999988765443322222      67788888888777643  1     


Q ss_pred             ------------------------------CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcC
Q psy7482         166 ------------------------------NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLT  214 (327)
Q Consensus       166 ------------------------------~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~  214 (327)
                                                    +.+.+||.--.-.+..+...-.+..++|+|. +.+++|+.|+.+|+.+--
T Consensus       161 ~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~  240 (447)
T KOG4497|consen  161 QISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHF  240 (447)
T ss_pred             HHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhcee
Confidence                                          1222333211111222223456888999995 889999999998886543


Q ss_pred             CCce------------------------------------------------------------eEEee------ecccc
Q psy7482         215 DGSH------------------------------------------------------------LWQIK------ASASR  228 (327)
Q Consensus       215 ~~~~------------------------------------------------------------~~~~~------~~~~~  228 (327)
                      +.++                                                            ++.++      .....
T Consensus       241 tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g  320 (447)
T KOG4497|consen  241 TWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCG  320 (447)
T ss_pred             eeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccc
Confidence            2110                                                            01111      11223


Q ss_pred             eEEEEEEecCCCcEEEEecCC--CeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCC
Q psy7482         229 IKGLVFFSIPQETTVCTGNEE--SAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTRE  304 (327)
Q Consensus       229 v~~~~~~~s~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~  304 (327)
                      +.-++|  ++|..++++-...  +.+-+||+++.+.-..+. ...+|+...|+|  ..|+.+.....+++|.....    
T Consensus       321 ~g~laf--s~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~----  393 (447)
T KOG4497|consen  321 AGKLAF--SCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGP----  393 (447)
T ss_pred             cceeee--cCCceEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCc----
Confidence            556778  4888898886543  679999998876544443 345899999999  66676766777999988775    


Q ss_pred             ceeeeecCCCCceEEEEeCCC
Q psy7482         305 PQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       305 ~~~~~~~~~~~~i~~l~~~p~  325 (327)
                       ..+.....+-.|..+.|+-+
T Consensus       394 -~~V~vP~~GF~i~~l~W~~~  413 (447)
T KOG4497|consen  394 -RVVGVPKKGFNIQKLQWLQP  413 (447)
T ss_pred             -eEEecCCCCceeeeEEecCC
Confidence             44554555566777777643

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.81  E-value=4.4e-17  Score=137.46  Aligned_cols=232  Identities=13%  Similarity=0.128  Sum_probs=157.7

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEec---CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS---DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      ..|.+||...... +.+..+...+...+|+|||+.|+..+   .+..+.+|++.+++.....  ...+. +....|+|||
T Consensus       179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~--~~~~~-~~~~~~SPDG  254 (429)
T PRK03629        179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA--SFPRH-NGAPAFSPDG  254 (429)
T ss_pred             eeEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEcc--CCCCC-cCCeEECCCC
Confidence            3689999865443 44445677899999999999988654   2457999999887654332  22233 5678999999


Q ss_pred             CEEEEE-eCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC--eEEEEEecCCceeeEec
Q psy7482         111 KLALSV-GKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN--KAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       111 ~~l~~~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d~~~~~~~~~~~  183 (327)
                      +.|+.. +.+|  .|.+||+++++........      ..+....|+|+|+.++..+  ++  .|+.+|+.+++......
T Consensus       255 ~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~------~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~  328 (429)
T PRK03629        255 SKLAFALSKTGSLNLYVMDLASGQIRQVTDGR------SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITW  328 (429)
T ss_pred             CEEEEEEcCCCCcEEEEEECCCCCEEEccCCC------CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeec
Confidence            988765 4444  4889999887654433222      1267889999999887765  33  45556776665433323


Q ss_pred             CCCceeEEEeecC-ceEEEeCC-C--CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCe---EEEEE
Q psy7482         184 SESKVHSVCFLNE-TTVCTGNE-E--SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESA---ITAYN  256 (327)
Q Consensus       184 ~~~~i~~~~~~~~-~~l~~~~~-d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~---i~i~d  256 (327)
                      .........|+|| ..++..+. +  ..|.+||+.+++.. .+... .......|  +|||+.|+.++.++.   +.+++
T Consensus       329 ~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~--SpDG~~i~~~s~~~~~~~l~~~~  404 (429)
T PRK03629        329 EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSI--APNGTMVIYSSSQGMGSVLNLVS  404 (429)
T ss_pred             CCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceE--CCCCCEEEEEEcCCCceEEEEEE
Confidence            4445667889998 56655433 2  35888999877643 33321 12345667  599999998887764   67777


Q ss_pred             cCCCceeEEeecccCceEEEeeeC
Q psy7482         257 LTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                      + ++.....+.+|.+.+...+|+|
T Consensus       405 ~-~G~~~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        405 T-DGRFKARLPATDGQVKFPAWSP  427 (429)
T ss_pred             C-CCCCeEECccCCCCcCCcccCC
Confidence            6 5666677778888888899987

>KOG1445|consensus

Probab=99.81  E-value=3.5e-19  Score=146.14  Aligned_cols=201  Identities=17%  Similarity=0.215  Sum_probs=154.0

Q ss_pred             CCccEEEEEe---CCCEEEEecCCCeEEEEEcccc-------ccccccccccccEEEEEECC-CCCeEEEecCCCcEEEE
Q psy7482          13 HTASVRSVAA---TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIF   81 (327)
Q Consensus        13 h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw   81 (327)
                      ....|+.+.|   |.+.||+++.||.|++|.+..+       ++...+..|...|+++.|+| ..+.|++++.|.+|++|
T Consensus       626 Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lW  705 (1012)
T KOG1445|consen  626 NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELW  705 (1012)
T ss_pred             cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeee
Confidence            3466889998   8899999999999999998754       34566788999999999999 56789999999999999


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      |+.+++....+ .+|.+. |..++|+|+|+.+++.+.||+|++|+.++++....- .....  ...-..+.|.-+|++++
T Consensus       706 Dl~~~~~~~~l-~gHtdq-If~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~E-g~gpv--gtRgARi~wacdgr~vi  780 (1012)
T KOG1445|consen  706 DLANAKLYSRL-VGHTDQ-IFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYE-GKGPV--GTRGARILWACDGRIVI  780 (1012)
T ss_pred             ehhhhhhhhee-ccCcCc-eeEEEECCCCcceeeeecCceEEEeCCCCCCCcccc-CCCCc--cCcceeEEEEecCcEEE
Confidence            99999998888 999999 999999999999999999999999999877643221 11111  12245678888998777


Q ss_pred             eec-----CCeEEEEEecCCc--eeeEec--CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCce
Q psy7482         162 IPI-----QNKAVVFSVEKAG--VLQTLK--SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSH  218 (327)
Q Consensus       162 ~~~-----~~~i~i~d~~~~~--~~~~~~--~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~  218 (327)
                      +.+     ...|.+||.++-.  .+.+..  ....+.--.+.+|  -++++|-.|..|.+|.+-...+
T Consensus       781 v~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esP  848 (1012)
T KOG1445|consen  781 VVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYESP  848 (1012)
T ss_pred             EecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEEecCCCc
Confidence            653     3578899876533  333332  1222222234455  4678899999999999866554

>KOG1240|consensus

Probab=99.81  E-value=3.4e-17  Score=143.58  Aligned_cols=260  Identities=14%  Similarity=0.180  Sum_probs=182.2

Q ss_pred             EEccccccccccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCCC-------eEEEeEEecccCCceeeEEEecCC
Q psy7482          39 YDMVKRKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSW-------QLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        39 w~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      |+. .|..+..+..|...+..++.++.. .++++|+.||+|++||...-       +...++  ...+.++.++.+.+.+
T Consensus      1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~lty--s~~~sr~~~vt~~~~~ 1110 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTY--SPEGSRVEKVTMCGNG 1110 (1431)
T ss_pred             CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEE--eccCCceEEEEeccCC
Confidence            664 477888899999999999988755 89999999999999998532       122223  2134449999999999


Q ss_pred             CEEEEEeCCCCEEEEEcCCC--ceeeeeecc-ccCccccceEEE-EEccC-Cc-EEEeec-CCeEEEEEecCCceeeEec
Q psy7482         111 KLALSVGKDKTLRTWNLVKG--RSAYITNLS-SYGVGFENLDSV-VWSPE-GL-LYAIPI-QNKAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       111 ~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~-~~~~~~~~v~~~-~~~~~-~~-~l~~~~-~~~i~i~d~~~~~~~~~~~  183 (327)
                      +.+|.++.||.|++.+++..  +........ ......+.+.++ ++... +. .++.+. .+.|..||++.......++
T Consensus      1111 ~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk 1190 (1431)
T KOG1240|consen 1111 DQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK 1190 (1431)
T ss_pred             CeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh
Confidence            99999999999999998762  111111000 011111223333 33332 23 555565 7899999999888777776


Q ss_pred             ---CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee-ecccceEEEEEEecC-CCcEEEEe-c-CCCeEEEE
Q psy7482         184 ---SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK-ASASRIKGLVFFSIP-QETTVCTG-N-EESAITAY  255 (327)
Q Consensus       184 ---~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~-~~~~l~~~-~-~d~~i~i~  255 (327)
                         ..+.|++++.+|. ..+++|+..|.+.+||++-+.++..+. ++..+++.+..++.+ .....+++ + ..+.|.+|
T Consensus      1191 ~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~w 1270 (1431)
T KOG1240|consen 1191 NQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTW 1270 (1431)
T ss_pred             cCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeee
Confidence               4688999999998 899999999999999999888877763 345678888776422 22444444 3 46789999


Q ss_pred             EcCCCceeEEeeccc-----------------Cc---eEEEeeeC-cEEEEEecCCcEEEEEccCcc
Q psy7482         256 NLTDGSHLWHIKASA-----------------SR---IKGLASHR-NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       256 d~~~~~~~~~~~~~~-----------------~~---v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      ++.+|..-..+....                 ..   +.+....+ ..+.+|+.|..||.||.....
T Consensus      1271 n~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1271 NMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred             ecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcc
Confidence            999987655554320                 01   11111222 889999999999999998774

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.80  E-value=3.5e-16  Score=128.44  Aligned_cols=246  Identities=16%  Similarity=0.209  Sum_probs=157.6

Q ss_pred             EEEecCCCcEEEEEcCC-Ce--EEEeEEecccCCceeeEEEecCCCEEEEEe-CCCCEEEEEcCC-CceeeeeeccccCc
Q psy7482          69 LISCSDDGSIAIFRVGS-WQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVK-GRSAYITNLSSYGV  143 (327)
Q Consensus        69 l~~~~~d~~i~iw~~~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~  143 (327)
                      .++...++.|.+|++.+ ++  .+..+  ...+. ...++++|++++|++++ .++.|.+|+++. ++........ .  
T Consensus         5 y~~~~~~~~I~~~~~~~~g~l~~~~~~--~~~~~-~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~--   78 (330)
T PRK11028          5 YIASPESQQIHVWNLNHEGALTLLQVV--DVPGQ-VQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-L--   78 (330)
T ss_pred             EEEcCCCCCEEEEEECCCCceeeeeEE--ecCCC-CccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-C--
Confidence            34446789999999964 33  33443  22234 77899999999887765 478899999863 3322111111 1  


Q ss_pred             cccceEEEEEccCCcEEEeec--CCeEEEEEecCCc----eeeEecCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCC
Q psy7482         144 GFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG----VLQTLKSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTD  215 (327)
Q Consensus       144 ~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~----~~~~~~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~  215 (327)
                       ......++++|++++++++.  ++.+.+|++.+..    ....+........++++|+ +++ ++...++.|.+||+.+
T Consensus        79 -~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~  157 (330)
T PRK11028         79 -PGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSD  157 (330)
T ss_pred             -CCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECC
Confidence             11267899999999888775  8999999997432    2233334455778889998 555 4556779999999976


Q ss_pred             CceeE-------EeeecccceEEEEEEecCCCcEEEEecC-CCeEEEEEcCC--Cc--eeEEeeccc------CceEEEe
Q psy7482         216 GSHLW-------QIKASASRIKGLVFFSIPQETTVCTGNE-ESAITAYNLTD--GS--HLWHIKASA------SRIKGLA  277 (327)
Q Consensus       216 ~~~~~-------~~~~~~~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~~~--~~--~~~~~~~~~------~~v~~~~  277 (327)
                      ...+.       .... ......++|+  |+|+++++++. ++.|.+|++..  ++  .+..+..+.      .....+.
T Consensus       158 ~g~l~~~~~~~~~~~~-g~~p~~~~~~--pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~  234 (330)
T PRK11028        158 DGHLVAQEPAEVTTVE-GAGPRHMVFH--PNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIH  234 (330)
T ss_pred             CCcccccCCCceecCC-CCCCceEEEC--CCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEE
Confidence            43221       1111 2335678884  99999988876 89999999974  32  333333221      1233588


Q ss_pred             eeC--cEEEEEec-CCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         278 SHR--NHLICITS-AGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       278 ~~~--~~l~~~~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++|  ++++++.. ++.|.+|+++... .....+.....+.....++++|+
T Consensus       235 ~~pdg~~lyv~~~~~~~I~v~~i~~~~-~~~~~~~~~~~~~~p~~~~~~~d  284 (330)
T PRK11028        235 ITPDGRHLYACDRTASLISVFSVSEDG-SVLSFEGHQPTETQPRGFNIDHS  284 (330)
T ss_pred             ECCCCCEEEEecCCCCeEEEEEEeCCC-CeEEEeEEEeccccCCceEECCC
Confidence            889  67777754 6889999997652 11222222222334556777775

>KOG1524|consensus

Probab=99.80  E-value=4.1e-18  Score=137.18  Aligned_cols=208  Identities=14%  Similarity=0.167  Sum_probs=157.0

Q ss_pred             CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceee
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH  103 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~  103 (327)
                      ...|+.++.||.+.+.+ +.++....+..|.+.+.+-.|+|||.-|+++++||.|++|.- +|.+..++ .. .+.+|.|
T Consensus        75 ~d~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl-~Q-~~~~v~c  150 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTV-VQ-NEESIRC  150 (737)
T ss_pred             cceEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHH-hh-cCceeEE
Confidence            34678888899999987 567888889999999999999999999999999999999984 45555554 33 3334999


Q ss_pred             EEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe
Q psy7482         104 ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL  182 (327)
Q Consensus       104 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~  182 (327)
                      ++|.|+.+.++.+.. +.+.|=.+.....+...+     .|.+-|.++.|++.+.++++|+ |-..++||.........-
T Consensus       151 ~~W~p~S~~vl~c~g-~h~~IKpL~~n~k~i~Wk-----AHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~  224 (737)
T KOG1524|consen  151 ARWAPNSNSIVFCQG-GHISIKPLAANSKIIRWR-----AHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSA  224 (737)
T ss_pred             EEECCCCCceEEecC-CeEEEeecccccceeEEe-----ccCcEEEEeecCccccceeecCCceeEEeecccCcccccCC
Confidence            999998776665533 566665554433322222     2234499999999999999998 889999997654444444


Q ss_pred             cCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEE
Q psy7482         183 KSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAY  255 (327)
Q Consensus       183 ~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~  255 (327)
                      .|+.+|++++|.|+..++.++.+ +++           --+...+.|..++|  |+||..++.|...|.+.+=
T Consensus       225 ~~ey~ITSva~npd~~~~v~S~n-t~R-----------~~~p~~GSifnlsW--S~DGTQ~a~gt~~G~v~~A  283 (737)
T KOG1524|consen  225 AEEYAITSVAFNPEKDYLLWSYN-TAR-----------FSSPRVGSIFNLSW--SADGTQATCGTSTGQLIVA  283 (737)
T ss_pred             hhccceeeeeeccccceeeeeee-eee-----------ecCCCccceEEEEE--cCCCceeeccccCceEEEe
Confidence            59999999999999666666542 333           11235567999999  5999999999999886654

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.80  E-value=6.6e-16  Score=126.63  Aligned_cols=273  Identities=10%  Similarity=0.098  Sum_probs=177.4

Q ss_pred             EEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEec-CCCcEEEEEcCCCeEEEeEEec
Q psy7482          19 SVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVGSWQLEKLFKKA   95 (327)
Q Consensus        19 ~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~   95 (327)
                      .+.+  |++++++++.||.|.++|+.+++.+.+++... ....+++++||++++++. ..+.+.++|.++.+.++.+...
T Consensus        41 ~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~  119 (369)
T PF02239_consen   41 GLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTG  119 (369)
T ss_dssp             EEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--
T ss_pred             EEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccc
Confidence            3455  89999999999999999999999998887544 467899999999998775 5889999999999999887433


Q ss_pred             cc-----CCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCe
Q psy7482          96 HK-----GTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNK  167 (327)
Q Consensus        96 ~~-----~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~  167 (327)
                      ..     ...+..+..+|....++..-. .+.|.+.|....+..........    .......|+|++++++++.  .+.
T Consensus       120 ~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g----~~~~D~~~dpdgry~~va~~~sn~  195 (369)
T PF02239_consen  120 GMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVG----RFPHDGGFDPDGRYFLVAANGSNK  195 (369)
T ss_dssp             EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE------TTEEEEEE-TTSSEEEEEEGGGTE
T ss_pred             cccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeeccc----ccccccccCcccceeeecccccce
Confidence            21     223778888887775555544 48888888776654433222221    1277899999999887764  789


Q ss_pred             EEEEEecCCceeeEec-----CCCceeEEEeecC-c----------eEEEeCCCCcEEEEEcCCCceeEEeeecccceEE
Q psy7482         168 AVVFSVEKAGVLQTLK-----SESKVHSVCFLNE-T----------TVCTGNEESAITAYNLTDGSHLWQIKASASRIKG  231 (327)
Q Consensus       168 i~i~d~~~~~~~~~~~-----~~~~i~~~~~~~~-~----------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~  231 (327)
                      +-++|.++++....+.     +..+...+ .+|. +          ..++.-....+.+||..+.+.+++++....+ ..
T Consensus       196 i~viD~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lF  273 (369)
T PF02239_consen  196 IAVIDTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LF  273 (369)
T ss_dssp             EEEEETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---
T ss_pred             eEEEeeccceEEEEeeccccccccccccc-cCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCc-ce
Confidence            9999999988777664     22333322 1222 1          1112222334557888889999999877666 55


Q ss_pred             EEEEecCCCcEEEEe----cCCCeEEEEEcCCCceeEEeeccc-CceEEEeeeC--cEEE-EEecCC-cEEEEEccCc
Q psy7482         232 LVFFSIPQETTVCTG----NEESAITAYNLTDGSHLWHIKASA-SRIKGLASHR--NHLI-CITSAG-DLVVWELNED  300 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~----~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~--~~l~-~~~~dg-~v~iw~~~~~  300 (327)
                      +..+  |+++++.+.    ...+.|.++|.++.+.+.++.... ..+..+.|++  +.+. |.-.++ .|.+||..+.
T Consensus       274 i~th--P~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl  349 (369)
T PF02239_consen  274 IKTH--PDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTL  349 (369)
T ss_dssp             EE----TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTT
T ss_pred             eecC--CCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCc
Confidence            6664  999999987    455889999999998877776433 3588999999  4443 333333 6999999988

...

>KOG0322|consensus

Probab=99.79  E-value=7.6e-18  Score=123.94  Aligned_cols=269  Identities=13%  Similarity=0.143  Sum_probs=179.2

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      .+...+..|.+.|+++.|..+++ |++|...|.|++|++.+.+....+ ..+....|+.+.-.|+ ..+.+-+.|+.+.+
T Consensus         5 dP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~-r~~g~~~it~lq~~p~-d~l~tqgRd~~L~l   81 (323)
T KOG0322|consen    5 DPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLI-RLFGRLFITNLQSIPN-DSLDTQGRDPLLIL   81 (323)
T ss_pred             CCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhh-hhhccceeeceeecCC-cchhhcCCCceEEE
Confidence            34566778999999999987664 899999999999999998888777 5344444999988887 46888999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCc----EEEeecCC--eEEEEEecCCceeeEec-----CCCceeEEEe
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL----LYAIPIQN--KAVVFSVEKAGVLQTLK-----SESKVHSVCF  193 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~l~~~~~~--~i~i~d~~~~~~~~~~~-----~~~~i~~~~~  193 (327)
                      |++..+..+..-.......+   ....++.++++    +++.-+.+  .+.+-|......+....     ..+.+++..+
T Consensus        82 w~ia~s~~i~i~Si~~nslg---FCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~  158 (323)
T KOG0322|consen   82 WTIAYSAFISIHSIVVNSLG---FCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDK  158 (323)
T ss_pred             EEccCcceEEEeeeeccccc---cccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeec
Confidence            99987655443332211100   12222223221    22222211  12223322222222211     2355666665


Q ss_pred             ecC----ceEEEeCCCCcEEEEEcCCCc----------eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         194 LNE----TTVCTGNEESAITAYNLTDGS----------HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       194 ~~~----~~l~~~~~d~~i~i~d~~~~~----------~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      .-+    -++++|.++|.+.+||+.++.          .......|..++.++.+.  +.-..=++|+.+..+..|++..
T Consensus       159 ~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldya--s~~~rGisgga~dkl~~~Sl~~  236 (323)
T KOG0322|consen  159 DHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYA--SSCDRGISGGADDKLVMYSLNH  236 (323)
T ss_pred             cccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeec--hhhcCCcCCCccccceeeeecc
Confidence            433    257788999999999999873          333445788999999995  4444557788888899998764


Q ss_pred             C--c--eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         260 G--S--HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       260 ~--~--~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      .  .  ...++...+..|..+..-|  +.+|+++.|+.||||..++.   .|-.+. ..|...|++++|+|+
T Consensus       237 s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl---~pLAVL-kyHsagvn~vAfspd  304 (323)
T KOG0322|consen  237 STGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTL---NPLAVL-KYHSAGVNAVAFSPD  304 (323)
T ss_pred             ccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccC---Cchhhh-hhhhcceeEEEeCCC
Confidence            3  2  2222333334677777777  99999999999999999998   333332 346788999999998

>KOG1272|consensus

Probab=99.79  E-value=2.2e-19  Score=141.76  Aligned_cols=191  Identities=15%  Similarity=0.258  Sum_probs=176.3

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceee
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQ  180 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~  180 (327)
                      ...+.++.+|+.|+.|+.-|.|..+|..+++....+.....      |.++.|-.+.+++|++-...+++||- .|..+.
T Consensus       132 PY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Et------v~Dv~~LHneq~~AVAQK~y~yvYD~-~GtElH  204 (545)
T KOG1272|consen  132 PYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMET------VRDVTFLHNEQFFAVAQKKYVYVYDN-NGTELH  204 (545)
T ss_pred             CeeeeecCCccEEEecCCccceeeeecccceeeeeeehhhh------hhhhhhhcchHHHHhhhhceEEEecC-CCcEEe
Confidence            57789999999999999999999999999998887777666      99999999999999999999999994 588889


Q ss_pred             EecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         181 TLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       181 ~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      .++....+..+.|.|. -+|++++..|.++.-|+.+|+.+..+....+.+..+.-.  |-...+-+|...|+|.+|....
T Consensus       205 Clk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qN--P~NaVih~GhsnGtVSlWSP~s  282 (545)
T KOG1272|consen  205 CLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQN--PYNAVIHLGHSNGTVSLWSPNS  282 (545)
T ss_pred             ehhhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcC--CccceEEEcCCCceEEecCCCC
Confidence            9998899999999998 667888999999999999999999998888888888874  8888999999999999999999


Q ss_pred             CceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         260 GSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       260 ~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+++..+..|.++|.++++.+  ++++|.+.|..++|||+..-
T Consensus       283 kePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~  325 (545)
T KOG1272|consen  283 KEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNF  325 (545)
T ss_pred             cchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccc
Confidence            999999999999999999999  99999999999999999887

>KOG3881|consensus

Probab=99.79  E-value=5.2e-17  Score=125.85  Aligned_cols=265  Identities=16%  Similarity=0.245  Sum_probs=189.1

Q ss_pred             CCccEEEEEe--C--CCEEEEecCCCeEEEEEcccccccccc------ccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482          13 HTASVRSVAA--T--SKLAASSGADETVVLYDMVKRKQSGAL------MQHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus        13 h~~~v~~~~~--~--~~~l~~~~~dg~v~~w~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      ....|.+++|  +  .+.+...+.|..+....+........+      .....+|-.++..  +..|++|-.+|.+.+|.
T Consensus        54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~~  131 (412)
T KOG3881|consen   54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVRH  131 (412)
T ss_pred             hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEEe
Confidence            3456777888  3  334555546667777777666544443      2345566666654  34688889999999999


Q ss_pred             cCCCe----EEEeEEecccCCceeeEEEecCC-CEEEEEeCC--CCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482          83 VGSWQ----LEKLFKKAHKGTAVNHISIHPSG-KLALSVGKD--KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        83 ~~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      .+.+.    ....+  .... ++..+.-++.. ..+++|+..  ..+.+||+++.+.+..  ....             |
T Consensus       132 ~k~~d~hss~l~~l--a~g~-g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~--aKNv-------------p  193 (412)
T KOG3881|consen  132 DKSGDLHSSKLIKL--ATGP-GLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWS--AKNV-------------P  193 (412)
T ss_pred             ccCCccccccceee--ecCC-ceeeeccCCCCCceEecCchhcccceeeeecccceeeee--ccCC-------------C
Confidence            88543    22222  1122 27777777644 455568887  7899999987744322  2211             2


Q ss_pred             CCcEEEeecCCeEEEEEecCCceeeEecCCCceeEEEeecC---ceEEEeCCCCcEEEEEcCCCc-eeEEeeecccceEE
Q psy7482         156 EGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE---TTVCTGNEESAITAYNLTDGS-HLWQIKASASRIKG  231 (327)
Q Consensus       156 ~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~  231 (327)
                      +..+     +=.+-+|                ++++.|.+.   ..+++++.-+.+++||.+.++ ++.++..-+.++++
T Consensus       194 nD~L-----~LrVPvW----------------~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~  252 (412)
T KOG3881|consen  194 NDRL-----GLRVPVW----------------ITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISS  252 (412)
T ss_pred             Cccc-----cceeeee----------------eccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCccee
Confidence            2211     2234455                345556543   679999999999999998654 57888878889999


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEE-eecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceee
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWH-IKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRV  308 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~  308 (327)
                      +...  |+++++++|..-+.+..||++.++.+.. +++-.+.|+++..+|  +++++++-|..|||+|+.+.     ..+
T Consensus       253 ~~l~--p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktr-----kll  325 (412)
T KOG3881|consen  253 TGLT--PSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTR-----KLL  325 (412)
T ss_pred             eeec--CCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccc-----hhh
Confidence            9985  9999999999999999999999997766 888999999999999  79999999999999999996     444


Q ss_pred             eecCCCCceEEEEeCCC
Q psy7482         309 SATNDGCRFTCLAIRPP  325 (327)
Q Consensus       309 ~~~~~~~~i~~l~~~p~  325 (327)
                      ...+.++++++|-+.++
T Consensus       326 ~kvYvKs~lt~il~~~~  342 (412)
T KOG3881|consen  326 HKVYVKSRLTFILLRDD  342 (412)
T ss_pred             hhhhhhccccEEEecCC
Confidence            45566777888888664

>KOG2111|consensus

Probab=99.78  E-value=7.2e-15  Score=111.26  Aligned_cols=231  Identities=14%  Similarity=0.188  Sum_probs=161.7

Q ss_pred             cEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccc--cEEEEEECCCCCeEE-EecCC------CcEEEEEcC
Q psy7482          16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEG--TITCLKFTPEGSHLI-SCSDD------GSIAIFRVG   84 (327)
Q Consensus        16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-~~~~d------~~i~iw~~~   84 (327)
                      ...+++|  |..-+++|..+| .+||+.+.-++....+-+.+  .+..|-|-  .++|+ +|+.+      ..|.|||-.
T Consensus         7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR--~N~laLVGGg~~pky~pNkviIWDD~   83 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFR--SNYLALVGGGSRPKYPPNKVIIWDDL   83 (346)
T ss_pred             ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhh--hceEEEecCCCCCCCCCceEEEEecc
Confidence            3455888  777788887666 99999876554333332222  23333332  44554 34433      479999966


Q ss_pred             CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcC-CCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV-KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      ..+++.++  ..... |.++.+.++  .+++.- ++.|.+|... +.+.+..+.....+.   ...+++-..+..+|+.-
T Consensus        84 k~~~i~el--~f~~~-I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPk---GlC~~~~~~~k~~LafP  154 (346)
T KOG2111|consen   84 KERCIIEL--SFNSE-IKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPK---GLCSLCPTSNKSLLAFP  154 (346)
T ss_pred             cCcEEEEE--Eeccc-eeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCC---ceEeecCCCCceEEEcC
Confidence            66666665  22333 999999865  566554 4789999987 445544444333211   14455444455666665


Q ss_pred             c--CCeEEEEEecCCce--eeEec-CCCceeEEEeecC-ceEEEeCCCCc-EEEEEcCCCceeEEeee--cccceEEEEE
Q psy7482         164 I--QNKAVVFSVEKAGV--LQTLK-SESKVHSVCFLNE-TTVCTGNEESA-ITAYNLTDGSHLWQIKA--SASRIKGLVF  234 (327)
Q Consensus       164 ~--~~~i~i~d~~~~~~--~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~~~v~~~~~  234 (327)
                      +  -|.|++-|+...+.  ...+. |.+.|.+++.+.+ .++++++..|+ |||||..+++.+.+++-  ....|++++|
T Consensus       155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaF  234 (346)
T KOG2111|consen  155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAF  234 (346)
T ss_pred             CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEe
Confidence            5  69999999987766  23444 9999999999988 78899999997 69999999999998853  3457999999


Q ss_pred             EecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482         235 FSIPQETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                        ||+..+|+++|+.|++.||.++..
T Consensus       235 --Sp~~s~LavsSdKgTlHiF~l~~~  258 (346)
T KOG2111|consen  235 --SPNSSWLAVSSDKGTLHIFSLRDT  258 (346)
T ss_pred             --CCCccEEEEEcCCCeEEEEEeecC
Confidence              599999999999999999988753

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.78  E-value=1.1e-16  Score=135.55  Aligned_cols=232  Identities=14%  Similarity=0.166  Sum_probs=155.2

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      ..|.+||.. +...+.+..+...+.+.+|+|||+.|+..+.+   ..|.+||+.+++....  ....+. .....|+|||
T Consensus       184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l--~~~~g~-~~~~~~SpDG  259 (433)
T PRK04922        184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELV--ASFRGI-NGAPSFSPDG  259 (433)
T ss_pred             EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEe--ccCCCC-ccCceECCCC
Confidence            468999985 44445566677789999999999999877643   4699999988765433  223333 5678999999


Q ss_pred             CEEE-EEeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC--eEEEEEecCCceeeEec
Q psy7482         111 KLAL-SVGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN--KAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       111 ~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d~~~~~~~~~~~  183 (327)
                      +.++ +.+.+|  .|++||+.+++........      ......+|+|+|+.++..+  ++  .++++|+.+++......
T Consensus       260 ~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~------~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~  333 (433)
T PRK04922        260 RRLALTLSRDGNPEIYVMDLGSRQLTRLTNHF------GIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTF  333 (433)
T ss_pred             CEEEEEEeCCCCceEEEEECCCCCeEECccCC------CCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeec
Confidence            8775 445555  5999999887654332211      1145789999999887765  33  47777776665433322


Q ss_pred             CCCceeEEEeecC-ceEEEeCCC-C--cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC---CeEEEEE
Q psy7482         184 SESKVHSVCFLNE-TTVCTGNEE-S--AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE---SAITAYN  256 (327)
Q Consensus       184 ~~~~i~~~~~~~~-~~l~~~~~d-~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d---~~i~i~d  256 (327)
                      ........+|+|+ +.++..+.+ +  .|.+||+.+++.. .+. +........|  +|+|+.++..+.+   +.|.+++
T Consensus       334 ~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~--spdG~~i~~~s~~~g~~~L~~~~  409 (433)
T PRK04922        334 QGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSF--APNGSMVLYATREGGRGVLAAVS  409 (433)
T ss_pred             CCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceE--CCCCCEEEEEEecCCceEEEEEE
Confidence            3344557899999 566554333 2  6899999877654 332 2223445677  4999988766553   4588888


Q ss_pred             cCCCceeEEeecccCceEEEeeeC
Q psy7482         257 LTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                      +. +.....+..+.+.+...+|+|
T Consensus       410 ~~-g~~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        410 TD-GRVRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             CC-CCceEEcccCCCCCCCCccCC
Confidence            74 445566666666777777876

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.78  E-value=3.9e-16  Score=132.50  Aligned_cols=231  Identities=11%  Similarity=0.143  Sum_probs=154.4

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC---CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      ..|.++|.. +...+.+..|...+.+.+|+|||+.|+..+.   +..|.+||+.+++... + ....+. +....|+|||
T Consensus       182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~-l-~~~~g~-~~~~~~SPDG  257 (435)
T PRK05137        182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL-V-GNFPGM-TFAPRFSPDG  257 (435)
T ss_pred             eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE-e-ecCCCc-ccCcEECCCC
Confidence            378899974 4555566678889999999999999887653   4689999998876543 3 334444 7788999999


Q ss_pred             CEEE-EEeCCCC--EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC----CeEEEEEecCCceeeEec
Q psy7482         111 KLAL-SVGKDKT--LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ----NKAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       111 ~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----~~i~i~d~~~~~~~~~~~  183 (327)
                      +.|+ +.+.++.  |.+||+.+++........      .......|+|||+.++..++    ..|+++|+..++......
T Consensus       258 ~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~------~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~  331 (435)
T PRK05137        258 RKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSP------AIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISF  331 (435)
T ss_pred             CEEEEEEecCCCceEEEEECCCCceEEccCCC------CccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeec
Confidence            8775 4555554  777788877654332211      12567899999998877652    368888987665544333


Q ss_pred             CCCceeEEEeecC-ceEEEeCCC---CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC------CeEE
Q psy7482         184 SESKVHSVCFLNE-TTVCTGNEE---SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE------SAIT  253 (327)
Q Consensus       184 ~~~~i~~~~~~~~-~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d------~~i~  253 (327)
                      ....+....|+|+ +.++....+   ..|.+||+..+.. ..+.. ...+....|  +|+|+.|+..+.+      ..+.
T Consensus       332 ~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~-~~~~~~p~~--spDG~~i~~~~~~~~~~~~~~L~  407 (435)
T PRK05137        332 GGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS-GFLVEGPTW--APNGRVIMFFRQTPGSGGAPKLY  407 (435)
T ss_pred             CCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC-CCCCCCCeE--CCCCCEEEEEEccCCCCCcceEE
Confidence            4556677889999 566554432   3688888765433 33322 224667788  4999988765432      3688


Q ss_pred             EEEcCCCceeEEeecccCceEEEeeeC
Q psy7482         254 AYNLTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       254 i~d~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                      ++|+..+.. ..+. ..+.+...+|+|
T Consensus       408 ~~dl~g~~~-~~l~-~~~~~~~p~Wsp  432 (435)
T PRK05137        408 TVDLTGRNE-REVP-TPGDASDPAWSP  432 (435)
T ss_pred             EEECCCCce-EEcc-CCCCccCcccCC
Confidence            888866544 3443 233456667765

>KOG2139|consensus

Probab=99.78  E-value=3.3e-16  Score=120.43  Aligned_cols=276  Identities=13%  Similarity=0.177  Sum_probs=178.8

Q ss_pred             ccEEEEEeCC--CEEEEecCCCeEEEEEcccccccccccc-ccccEEEEEECCC-CCeEEEecCCCcEEEEEcCCC----
Q psy7482          15 ASVRSVAATS--KLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSW----   86 (327)
Q Consensus        15 ~~v~~~~~~~--~~l~~~~~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~----   86 (327)
                      ..+..++|+.  .-+|++..|-.|++||-.. +....++. ....|+|++|-|. +..|+.|+.. -|.+|.....    
T Consensus        99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~-gIciW~~s~tln~~  176 (445)
T KOG2139|consen   99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLNAN  176 (445)
T ss_pred             cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecc-eeEEEEcCcccccc
Confidence            4466777844  4467888999999999766 44444442 4567999999995 4567777766 4899976421    


Q ss_pred             e--------EEEeEEecccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          87 Q--------LEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        87 ~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      .        ....+ ......+|+++.|++||..+++++. |..|.+||..++..+.......     +.+.-+.|+||+
T Consensus       177 r~~~~~s~~~~qvl-~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~gl-----gg~slLkwSPdg  250 (445)
T KOG2139|consen  177 RNIRMMSTHHLQVL-QDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGL-----GGFSLLKWSPDG  250 (445)
T ss_pred             cccccccccchhhe-eCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCC-----CceeeEEEcCCC
Confidence            1        11222 2222235999999999999999875 6789999999998766553322     238899999999


Q ss_pred             cEEEeec-CCeEEEEEecCC-ceeeEecCCCceeEEEeecCc--eEEEeCCCCcEEEEEcCCCc-------------eeE
Q psy7482         158 LLYAIPI-QNKAVVFSVEKA-GVLQTLKSESKVHSVCFLNET--TVCTGNEESAITAYNLTDGS-------------HLW  220 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~-------------~~~  220 (327)
                      .++.++. |+..++|+.... ....-.-..+.+...+|+|++  +|++.+....++-.......             .+.
T Consensus       251 d~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~llia  330 (445)
T KOG2139|consen  251 DVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIA  330 (445)
T ss_pred             CEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeec
Confidence            9888887 999999955433 333333366799999999983  34444444433322221110             000


Q ss_pred             Ee-----ee----cccceEEEEEEecCCCcEEEEecCCC--------eEEEEEcCCCceeEEee-c--ccCceEEEeeeC
Q psy7482         221 QI-----KA----SASRIKGLVFFSIPQETTVCTGNEES--------AITAYNLTDGSHLWHIK-A--SASRIKGLASHR  280 (327)
Q Consensus       221 ~~-----~~----~~~~v~~~~~~~s~~~~~l~~~~~d~--------~i~i~d~~~~~~~~~~~-~--~~~~v~~~~~~~  280 (327)
                      .+     ..    -.+++.+++|  +|.|.+|++.-..+        .|.+||.+..-.+.... +  ......-+.|+|
T Consensus       331 DL~e~ti~ag~~l~cgeaq~law--DpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~p  408 (445)
T KOG2139|consen  331 DLQEVTICAGQRLCCGEAQCLAW--DPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGP  408 (445)
T ss_pred             cchhhhhhcCcccccCccceeeE--CCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeee
Confidence            11     01    1356789999  59999999865443        36777766543332221 1  112345677777


Q ss_pred             -----cEEEEEecCCcEEEEEccCc
Q psy7482         281 -----NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 -----~~l~~~~~dg~v~iw~~~~~  300 (327)
                           .+|..+=..|.+.-|++...
T Consensus       409 l~n~g~lLsiaWsTGriq~ypl~f~  433 (445)
T KOG2139|consen  409 LKNEGRLLSIAWSTGRIQRYPLTFQ  433 (445)
T ss_pred             cccCCcEEEEEeccCceEeeeeEEE
Confidence                 66667777788887777654

>KOG1334|consensus

Probab=99.78  E-value=3.9e-18  Score=135.58  Aligned_cols=268  Identities=14%  Similarity=0.227  Sum_probs=197.4

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEE
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRT  124 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i  124 (327)
                      ...+..|.+.|+.+.|+..|..|++|+.|..|.+||...++....+..+|... |....|-|  +...+++++.||.+++
T Consensus       135 ~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~N-vfQaKFiP~s~d~ti~~~s~dgqvr~  213 (559)
T KOG1334|consen  135 QKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNN-VFQAKFIPFSGDRTIVTSSRDGQVRV  213 (559)
T ss_pred             hhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccc-hhhhhccCCCCCcCceeccccCceee
Confidence            34567899999999999999999999999999999999999888887888888 88888988  4567999999999999


Q ss_pred             EEcCCCceee-eeeccccCccccceEEEEEccCCc--EEEeecCCeEEEEEecCCceeeEec----CCC---ceeEEEee
Q psy7482         125 WNLVKGRSAY-ITNLSSYGVGFENLDSVVWSPEGL--LYAIPIQNKAVVFSVEKAGVLQTLK----SES---KVHSVCFL  194 (327)
Q Consensus       125 wd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~i~i~d~~~~~~~~~~~----~~~---~i~~~~~~  194 (327)
                      =.+....... ...+   ..|.+++..++.-|+..  ++.+|.|+.+.-+|++.+.+...+.    ...   ....++..
T Consensus       214 s~i~~t~~~e~t~rl---~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~  290 (559)
T KOG1334|consen  214 SEILETGYVENTKRL---APHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVD  290 (559)
T ss_pred             eeeccccceecceec---ccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecC
Confidence            8765433222 2223   33456688999988763  4444559999999998876554443    222   56788888


Q ss_pred             cC--ceEEEeCCCCcEEEEEcCCCce------eEEee------ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC-
Q psy7482         195 NE--TTVCTGNEESAITAYNLTDGSH------LWQIK------ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD-  259 (327)
Q Consensus       195 ~~--~~l~~~~~d~~i~i~d~~~~~~------~~~~~------~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~-  259 (327)
                      |.  +.+++|+.|..+++||.+.-..      +.++-      .....|++++|+  .++.-|.++-.|-.|+++.-.- 
T Consensus       291 P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ys--h~~sElLaSYnDe~IYLF~~~~~  368 (559)
T KOG1334|consen  291 PRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYS--HDGSELLASYNDEDIYLFNKSMG  368 (559)
T ss_pred             CCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEec--CCccceeeeecccceEEeccccc
Confidence            86  6899999999999999875321      22222      223468999994  6777777777788899995332 


Q ss_pred             -C----------ceeEE-eecccC--ceEEEeeeC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEe
Q psy7482         260 -G----------SHLWH-IKASAS--RIKGLASHR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAI  322 (327)
Q Consensus       260 -~----------~~~~~-~~~~~~--~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~  322 (327)
                       |          ..+.. +++|..  .|..+-|-.   .++++|+.-|.|.||+-.++.  ..+.+....+  -|+||.=
T Consensus       369 ~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~e--ii~~MegDr~--VVNCLEp  444 (559)
T KOG1334|consen  369 DGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGE--IIRFMEGDRH--VVNCLEP  444 (559)
T ss_pred             cCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhH--HHHHhhcccc--eEeccCC
Confidence             2          22233 778853  577776654   999999999999999999882  3333333333  6888887


Q ss_pred             CC
Q psy7482         323 RP  324 (327)
Q Consensus       323 ~p  324 (327)
                      ||
T Consensus       445 HP  446 (559)
T KOG1334|consen  445 HP  446 (559)
T ss_pred             CC
Confidence            76

>KOG2394|consensus

Probab=99.78  E-value=2.7e-17  Score=132.41  Aligned_cols=241  Identities=13%  Similarity=0.206  Sum_probs=170.8

Q ss_pred             EEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE-eEE-ecccCCceeeEEEe-----cCCCEEEEEeCCCCEEEEEcCC
Q psy7482          57 ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK-LFK-KAHKGTAVNHISIH-----PSGKLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        57 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~-~~~~~~~v~~~~~~-----~~~~~l~~~~~dg~i~iwd~~~  129 (327)
                      +....++-.|++|+..-.+ .+++|+.+.+.... .+. .........|-+|+     +.+--++.|-..|.+.+.|...
T Consensus       126 ~~~~~~~~~gd~lcFnvg~-~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~~  204 (636)
T KOG2394|consen  126 VTNTNQSGKGDRLCFNVGR-ELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPIN  204 (636)
T ss_pred             eeeccccCCCCEEEEecCC-eEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecchh
Confidence            4444555566666654333 58888876432111 110 01111113444442     3455677788889999999876


Q ss_pred             CceeeeeeccccCccccceEEEEEccCCc-EEEee-cCCeEEEEEecC--------------Cc--------------ee
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSPEGL-LYAIP-IQNKAVVFSVEK--------------AG--------------VL  179 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~~~~i~i~d~~~--------------~~--------------~~  179 (327)
                      .+....+.... ...+..++++.|-|.+. .++++ .+|.+++||..-              +.              ++
T Consensus       205 ~~~sklfne~r-~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv  283 (636)
T KOG2394|consen  205 FEVSKLFNEER-LINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPV  283 (636)
T ss_pred             hHHHHhhhhcc-cccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCcc
Confidence            33322222221 22235699999999553 44444 499999997632              11              11


Q ss_pred             eEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         180 QTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       180 ~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      ..+. ..+.|..++|+|| .+|++.+.||.++|||..+.+.+..++..-+...|++|  ||||+|+++|++|-.|.||.+
T Consensus       284 ~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcW--SPDGKyIvtGGEDDLVtVwSf  361 (636)
T KOG2394|consen  284 ARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCW--SPDGKYIVTGGEDDLVTVWSF  361 (636)
T ss_pred             ceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEE--cCCccEEEecCCcceEEEEEe
Confidence            1111 3457889999999 89999999999999999998888878878888999999  599999999999999999999


Q ss_pred             CCCceeEEeecccCceEEEeeeC--------------------------------------------------cEEEEEe
Q psy7482         258 TDGSHLWHIKASASRIKGLASHR--------------------------------------------------NHLICIT  287 (327)
Q Consensus       258 ~~~~~~~~~~~~~~~v~~~~~~~--------------------------------------------------~~l~~~~  287 (327)
                      ..++.+..-++|...|..++|.|                                                  ..|.+.+
T Consensus       362 ~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVG  441 (636)
T KOG2394|consen  362 EERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVG  441 (636)
T ss_pred             ccceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccceEEEeeccc
Confidence            99999999999999999999993                                                  1477888


Q ss_pred             cCCcEEEEEccCcc
Q psy7482         288 SAGDLVVWELNEDV  301 (327)
Q Consensus       288 ~dg~v~iw~~~~~~  301 (327)
                      .|-.+.+||+..+.
T Consensus       442 qDTqlcLWDlteD~  455 (636)
T KOG2394|consen  442 QDTQLCLWDLTEDV  455 (636)
T ss_pred             ccceEEEEecchhh
Confidence            89999999998873

>KOG2139|consensus

Probab=99.78  E-value=2.1e-16  Score=121.49  Aligned_cols=241  Identities=8%  Similarity=0.139  Sum_probs=164.6

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCce
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      +..+..++|++.-..++++..|-.|++||-.. +....++...... |.+++|-|. +..|+.|+.. -|.+|.....-.
T Consensus        98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrn-vtclawRPlsaselavgCr~-gIciW~~s~tln  174 (445)
T KOG2139|consen   98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRN-VTCLAWRPLSASELAVGCRA-GICIWSDSRTLN  174 (445)
T ss_pred             hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcc-eeEEEeccCCcceeeeeecc-eeEEEEcCcccc
Confidence            34578899999777788999999999999876 5555563444555 999999994 5677888774 599998653211


Q ss_pred             eee---------eeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceE
Q psy7482         133 AYI---------TNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTV  199 (327)
Q Consensus       133 ~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l  199 (327)
                      ...         ..... ..+..+|+++.|.+||..+++++  +..|.+||..++..+.... ..+.+.-+.|+|| .++
T Consensus       175 ~~r~~~~~s~~~~qvl~-~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~l  253 (445)
T KOG2139|consen  175 ANRNIRMMSTHHLQVLQ-DPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVL  253 (445)
T ss_pred             cccccccccccchhhee-CCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEE
Confidence            100         00011 11236799999999999999987  7899999999988766663 6788999999999 899


Q ss_pred             EEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEe-cCCCeEEEEEcCCCc-------------eeEE
Q psy7482         200 CTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG-NEESAITAYNLTDGS-------------HLWH  265 (327)
Q Consensus       200 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~-------------~~~~  265 (327)
                      +++..|+..++|+..............+.|...+|  +|+|++|+.. +....++-.......             ++..
T Consensus       254 faAt~davfrlw~e~q~wt~erw~lgsgrvqtacW--spcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaD  331 (445)
T KOG2139|consen  254 FAATCDAVFRLWQENQSWTKERWILGSGRVQTACW--SPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIAD  331 (445)
T ss_pred             EEecccceeeeehhcccceecceeccCCceeeeee--cCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeecc
Confidence            99999999999965544333333344558999999  4898876544 333333322211110             1111


Q ss_pred             ee-----cc----cCceEEEeeeC--cEEEEEecCCc--------EEEEEccCc
Q psy7482         266 IK-----AS----ASRIKGLASHR--NHLICITSAGD--------LVVWELNED  300 (327)
Q Consensus       266 ~~-----~~----~~~v~~~~~~~--~~l~~~~~dg~--------v~iw~~~~~  300 (327)
                      +.     ..    .+++.+++|.|  .+||+.-..+.        |.+||....
T Consensus       332 L~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~s  385 (445)
T KOG2139|consen  332 LQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKS  385 (445)
T ss_pred             chhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhccccc
Confidence            11     11    35788999999  88887765443        566766543

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.77  E-value=6.4e-16  Score=130.58  Aligned_cols=232  Identities=10%  Similarity=0.130  Sum_probs=150.2

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      ..|.++|. ++.....+..+...+.+.+|+|||+.|+..+.+   ..|.+||+.+++....  ....+. +....|+|||
T Consensus       176 ~~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l--~~~~g~-~~~~~~SPDG  251 (427)
T PRK02889        176 YQLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVV--ANFKGS-NSAPAWSPDG  251 (427)
T ss_pred             cEEEEECC-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEe--ecCCCC-ccceEECCCC
Confidence            45777776 455445555677889999999999999876643   3599999998875433  223334 6788999999


Q ss_pred             CEEE-EEeCCCCEEEEEc--CCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEE--ecCCceeeEec
Q psy7482         111 KLAL-SVGKDKTLRTWNL--VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFS--VEKAGVLQTLK  183 (327)
Q Consensus       111 ~~l~-~~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d--~~~~~~~~~~~  183 (327)
                      +.|+ +.+.+|...+|.+  ..+.... +  ...   ........|+|||+.++..+  ++...+|.  ..+++......
T Consensus       252 ~~la~~~~~~g~~~Iy~~d~~~~~~~~-l--t~~---~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~  325 (427)
T PRK02889        252 RTLAVALSRDGNSQIYTVNADGSGLRR-L--TQS---SGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTF  325 (427)
T ss_pred             CEEEEEEccCCCceEEEEECCCCCcEE-C--CCC---CCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEec
Confidence            8876 4567777666654  4443222 1  111   11245678999999877655  35555554  44444332222


Q ss_pred             CCCceeEEEeecC-ceEEEeCCCC---cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC---eEEEEE
Q psy7482         184 SESKVHSVCFLNE-TTVCTGNEES---AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES---AITAYN  256 (327)
Q Consensus       184 ~~~~i~~~~~~~~-~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~---~i~i~d  256 (327)
                      .........|+|+ +.++..+.++   .|.+||+.+++... +... .......|  +|+|+.|+..+.++   .+.+.+
T Consensus       326 ~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~--spdg~~l~~~~~~~g~~~l~~~~  401 (427)
T PRK02889        326 TGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRDESPSF--APNGRYILYATQQGGRSVLAAVS  401 (427)
T ss_pred             CCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCccCceE--CCCCCEEEEEEecCCCEEEEEEE
Confidence            3333456789999 6666555443   69999998876543 3222 23456778  49999888776543   366666


Q ss_pred             cCCCceeEEeecccCceEEEeeeC
Q psy7482         257 LTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                      + ++.....+..+.+.+...+|+|
T Consensus       402 ~-~g~~~~~l~~~~g~~~~p~wsp  424 (427)
T PRK02889        402 S-DGRIKQRLSVQGGDVREPSWGP  424 (427)
T ss_pred             C-CCCceEEeecCCCCCCCCccCC
Confidence            6 4666666666777778888887

>KOG1310|consensus

Probab=99.76  E-value=1.8e-17  Score=133.91  Aligned_cols=218  Identities=13%  Similarity=0.231  Sum_probs=162.0

Q ss_pred             cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEE
Q psy7482          46 QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLR  123 (327)
Q Consensus        46 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~  123 (327)
                      ....+.+|++.|+|+.|+.+|.+|++|+.|-.+.|||.-..+++..+.++|... |.++.|-|  +.+.+++|..|..|+
T Consensus        42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaN-IFsvKFvP~tnnriv~sgAgDk~i~  120 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTAN-IFSVKFVPYTNNRIVLSGAGDKLIK  120 (758)
T ss_pred             hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccc-eeEEeeeccCCCeEEEeccCcceEE
Confidence            446788999999999999999999999999999999999999999998999999 99999999  567899999999999


Q ss_pred             EEEcCCCceee-----eeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecCCceeeE-------ec----CC
Q psy7482         124 TWNLVKGRSAY-----ITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVLQT-------LK----SE  185 (327)
Q Consensus       124 iwd~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~-------~~----~~  185 (327)
                      ++|+...+.-.     .........|...|..++-.|++ ..+.+++ ||+++-||++.......       +.    .-
T Consensus       121 lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~l  200 (758)
T KOG1310|consen  121 LFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQL  200 (758)
T ss_pred             EEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhh
Confidence            99998532211     11122234556778899999988 6666666 99999999986322111       11    12


Q ss_pred             CceeEEEeecC--ceEEEeCCCCcEEEEEcCCC--------c----------eeEEe-eecc--------cc---eEEEE
Q psy7482         186 SKVHSVCFLNE--TTVCTGNEESAITAYNLTDG--------S----------HLWQI-KASA--------SR---IKGLV  233 (327)
Q Consensus       186 ~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~--------~----------~~~~~-~~~~--------~~---v~~~~  233 (327)
                      -...++..+|.  .+|++|+.|-..++||.+..        .          ++..+ .+|.        ..   ++-+.
T Consensus       201 ielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vt  280 (758)
T KOG1310|consen  201 IELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVT  280 (758)
T ss_pred             heeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEE
Confidence            34678889996  78999999999999995321        0          12222 1221        11   34556


Q ss_pred             EEecCCCcEEEEecCCCeEEEEEcCCCceeEEe
Q psy7482         234 FFSIPQETTVCTGNEESAITAYNLTDGSHLWHI  266 (327)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  266 (327)
                      |  +|+|.-|+..-....|+++|+..++....+
T Consensus       281 f--npNGtElLvs~~gEhVYlfdvn~~~~~~~y  311 (758)
T KOG1310|consen  281 F--NPNGTELLVSWGGEHVYLFDVNEDKSPTPY  311 (758)
T ss_pred             E--CCCCcEEEEeeCCeEEEEEeecCCCCceee
Confidence            6  488887777666678999999988755443

>KOG2321|consensus

Probab=99.75  E-value=9.2e-16  Score=124.74  Aligned_cols=255  Identities=16%  Similarity=0.287  Sum_probs=183.8

Q ss_pred             cccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecccCCc-eeeEEEecCCCEEEEEeCCCCEEEEEcCC
Q psy7482          52 QHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA-VNHISIHPSGKLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  129 (327)
                      .+....+.+..+|||+|+ ++|...-.|++||+.+..+  .+ ..|.+.. |.-.-.+.|-..++.-..|.+|.+.... 
T Consensus        49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSL--KF-ERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~-  124 (703)
T KOG2321|consen   49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSL--KF-ERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY-  124 (703)
T ss_pred             CCccccceeEecCCCcEEEEecccCCceEEEEccccee--ee-eecccccceeEEEeccchhhheEeecCceeeehhhc-
Confidence            367778999999999985 5777888999999985443  34 3344332 4444444454555656677777765432 


Q ss_pred             CceeeeeeccccCccccceEEEEEcc-CCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCC
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEES  206 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~  206 (327)
                      |. -..+.++..      -..++++. ...++++|+...|+-++++.|..+..+. ..+.++++..++- ++|++|+.+|
T Consensus       125 G~-hy~~RIP~~------GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g  197 (703)
T KOG2321|consen  125 GR-HYRTRIPKF------GRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDG  197 (703)
T ss_pred             Ce-eeeeecCcC------CccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCc
Confidence            22 223334444      45666654 5567788888999999999999999998 5588999999997 8999999999


Q ss_pred             cEEEEEcCCCceeEEeee------ccc-----ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee-cccCceE
Q psy7482         207 AITAYNLTDGSHLWQIKA------SAS-----RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK-ASASRIK  274 (327)
Q Consensus       207 ~i~i~d~~~~~~~~~~~~------~~~-----~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~  274 (327)
                      .|..||.++...+.++..      |.+     .|+++.|.  .+|-.+++|..+|.+.|||++..+++..-. +..-+|.
T Consensus       198 ~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~--d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~  275 (703)
T KOG2321|consen  198 VVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFR--DDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIK  275 (703)
T ss_pred             eEEEecchhhhhheeeecccccCCCccccccCcceEEEec--CCceeEEeeccCCcEEEEEcccCCceeecccCCcccee
Confidence            999999998877666532      222     48999994  669999999999999999999998775544 3346899


Q ss_pred             EEeeeC----cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         275 GLASHR----NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       275 ~~~~~~----~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      .+.|.+    ..+++. ....++|||-.++   .+  .........++.+++-|+
T Consensus       276 ~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~G---k~--~asiEpt~~lND~C~~p~  324 (703)
T KOG2321|consen  276 KLDWQDTDQQNKVVSM-DKRILKIWDECTG---KP--MASIEPTSDLNDFCFVPG  324 (703)
T ss_pred             eecccccCCCceEEec-chHHhhhcccccC---Cc--eeeccccCCcCceeeecC
Confidence            999977    445444 3567999999998   23  333334444777777665

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.74  E-value=6.3e-15  Score=124.47  Aligned_cols=231  Identities=12%  Similarity=0.106  Sum_probs=153.9

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC---CCCEEEEEcCCCceeeeeeccccCccccceEEEE
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK---DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                      ..|.+||....+... + ..+... +....|+|||+.|+..+.   +..|.+|++.+++..........      .....
T Consensus       179 ~~l~~~d~dg~~~~~-l-t~~~~~-~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~------~~~~~  249 (429)
T PRK03629        179 YELRVSDYDGYNQFV-V-HRSPQP-LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH------NGAPA  249 (429)
T ss_pred             eeEEEEcCCCCCCEE-e-ecCCCc-eeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCC------cCCeE
Confidence            368999987654433 3 334444 899999999998887543   35799999988875444333332      55689


Q ss_pred             EccCCcEEEeec--CC--eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCC-CCc--EEEEEcCCCceeEEeee
Q psy7482         153 WSPEGLLYAIPI--QN--KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNE-ESA--ITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       153 ~~~~~~~l~~~~--~~--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~-d~~--i~i~d~~~~~~~~~~~~  224 (327)
                      |+|||+.|+...  ++  .|++||+.+++..........+....|+|| +.++..+. ++.  |+++|+.+++. ..+..
T Consensus       250 ~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~  328 (429)
T PRK03629        250 FSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITW  328 (429)
T ss_pred             ECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeec
Confidence            999999887652  33  699999988876555555567788999999 55655544 344  55556666543 34433


Q ss_pred             cccceEEEEEEecCCCcEEEEecCC---CeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCc---EEEEE
Q psy7482         225 SASRIKGLVFFSIPQETTVCTGNEE---SAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGD---LVVWE  296 (327)
Q Consensus       225 ~~~~v~~~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~---v~iw~  296 (327)
                      +........|  +|+|++++..+.+   ..|.+||+.+++.. .+... .......|+|  ++|+.++.++.   +.+++
T Consensus       329 ~~~~~~~~~~--SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~  404 (429)
T PRK03629        329 EGSQNQDADV--SSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVS  404 (429)
T ss_pred             CCCCccCEEE--CCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEE
Confidence            3344556777  4999998775543   35889999887643 33221 1234677888  77888887765   67777


Q ss_pred             ccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         297 LNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++..   ....+.  .+.+.+...+|+|-
T Consensus       405 ~~G~---~~~~l~--~~~~~~~~p~Wsp~  428 (429)
T PRK03629        405 TDGR---FKARLP--ATDGQVKFPAWSPY  428 (429)
T ss_pred             CCCC---CeEECc--cCCCCcCCcccCCC
Confidence            7555   334443  34567888999984

>KOG1409|consensus

Probab=99.74  E-value=6.8e-16  Score=117.94  Aligned_cols=238  Identities=13%  Similarity=0.214  Sum_probs=173.9

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcc-ccccccccc-cccccEEEEEECCCCCeEEEecCCCcEEEEEcC-
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMV-KRKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG-   84 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~-   84 (327)
                      ++||.+.|++...  ..+-+++.+.|.+++||--. .++.-..+. ....+++++.+.++...|++|-.+|++.-+.+. 
T Consensus        20 ~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~se   99 (404)
T KOG1409|consen   20 IEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSE   99 (404)
T ss_pred             hcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhh
Confidence            3589999988777  67788999999999999543 333322222 345789999999999999999999999988653 


Q ss_pred             ---CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          85 ---SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        85 ---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                         .....+.. ..|... +..+.|+.....+++.+.|..+.---.+.+..+.-+.+...      ..++.+.-.  +..
T Consensus       100 dfnkm~~~r~~-~~h~~~-v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~------~t~~~~d~~--~~f  169 (404)
T KOG1409|consen  100 DFNKMTFLKDY-LAHQAR-VSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETP------ASALQFDAL--YAF  169 (404)
T ss_pred             hhhhcchhhhh-hhhhcc-eeeEEecCCceeEEEeccccceEEEeeccCCcccceEeecc------CCCCceeeE--EEE
Confidence               33444555 677777 99999999899999999998776655566555443333322      111111111  333


Q ss_pred             eec-CCeEEEEEe--cCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc-eeEEeeecccceEEEEEE
Q psy7482         162 IPI-QNKAVVFSV--EKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS-HLWQIKASASRIKGLVFF  235 (327)
Q Consensus       162 ~~~-~~~i~i~d~--~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~  235 (327)
                      .|. .|.+....+  ..-.++.++. |.+.+.+++|.|. +.+++|..|..+.+||+--.+ ....+.+|...|..+...
T Consensus       170 vGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~  249 (404)
T KOG1409|consen  170 VGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYA  249 (404)
T ss_pred             ecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhh
Confidence            343 455554443  3445666666 8899999999997 899999999999999986544 355678899999988885


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                        +--+.+++++.||.|.+|+.+.
T Consensus       250 --~~t~~l~S~~edg~i~~w~mn~  271 (404)
T KOG1409|consen  250 --QHTRQLISCGEDGGIVVWNMNV  271 (404)
T ss_pred             --hhheeeeeccCCCeEEEEeccc
Confidence              6788999999999999998754

>KOG2321|consensus

Probab=99.74  E-value=1.2e-15  Score=124.10  Aligned_cols=276  Identities=13%  Similarity=0.127  Sum_probs=195.8

Q ss_pred             CCccEEEEEe--CCCEE-EEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          13 HTASVRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l-~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      |....+.|..  ||+|+ |+|..--.|++||+.+..+...-.-....|.-.-.+.|-..++.-..|.+|.+..-. |...
T Consensus        50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~-G~hy  128 (703)
T KOG2321|consen   50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY-GRHY  128 (703)
T ss_pred             CccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhc-Ceee
Confidence            5666666666  89875 567788899999998765543332233445555555555556666677777665432 2211


Q ss_pred             EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeE
Q psy7482          90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKA  168 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i  168 (327)
                      ..- ....   -..++++.-..-|+.++....|+-++++.|..+..+....     ..++++..++...+|++|+ +|.+
T Consensus       129 ~~R-IP~~---GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~-----~~lN~v~in~~hgLla~Gt~~g~V  199 (703)
T KOG2321|consen  129 RTR-IPKF---GRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDS-----GELNVVSINEEHGLLACGTEDGVV  199 (703)
T ss_pred             eee-cCcC---CccccccCCCccEEEeecCcceEEEEcccccccccccccc-----ccceeeeecCccceEEecccCceE
Confidence            111 1111   3455666533345556666789999999998876665543     3499999999999999998 9999


Q ss_pred             EEEEecCCceeeEecCC------------CceeEEEeecCc-eEEEeCCCCcEEEEEcCCCceeEEe-eecccceEEEEE
Q psy7482         169 VVFSVEKAGVLQTLKSE------------SKVHSVCFLNET-TVCTGNEESAITAYNLTDGSHLWQI-KASASRIKGLVF  234 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~~~------------~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~  234 (327)
                      ..||.+....+..+...            ..|+++.|+.++ .+++|+.+|.+.|||++..+++..- .+...+|..+.|
T Consensus       200 EfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~  279 (703)
T KOG2321|consen  200 EFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDW  279 (703)
T ss_pred             EEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecc
Confidence            99999998877776522            239999999885 5899999999999999998886543 334568899999


Q ss_pred             EecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         235 FSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+..++..+++. ....++|||-.+|+....+.... .++.+++-|  .+++++-+++.+..|=++.-
T Consensus       280 ~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~-~lND~C~~p~sGm~f~Ane~~~m~~yyiP~L  345 (703)
T KOG2321|consen  280 QDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTS-DLNDFCFVPGSGMFFTANESSKMHTYYIPSL  345 (703)
T ss_pred             cccCCCceEEec-chHHhhhcccccCCceeeccccC-CcCceeeecCCceEEEecCCCcceeEEcccc
Confidence            753223445544 45789999999999888887554 589999988  89999999988877766553

>KOG2394|consensus

Probab=99.73  E-value=2.1e-16  Score=127.35  Aligned_cols=166  Identities=20%  Similarity=0.287  Sum_probs=123.5

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccc----cccccEEEEEECCCC-CeEEEecCCCcEEEEEcCC------------
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALM----QHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGS------------   85 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~----~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~------------   85 (327)
                      .+--++.|-.-|.|.+.|....+..+.+.    ..+..|+|+.|-|.+ ..++.+-.+|.+.+||..-            
T Consensus       184 ~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~  263 (636)
T KOG2394|consen  184 KGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQAL  263 (636)
T ss_pred             CCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCccccc
Confidence            34456667777888888876633222221    134789999999944 4566677899999997531            


Q ss_pred             --C--------------eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          86 --W--------------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        86 --~--------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                        +              .++..+ ....+. |+..+|+|||++||+.+.||.++|||..+.+.+..++.-     .+...
T Consensus       264 k~~~~f~i~t~ksk~~rNPv~~w-~~~~g~-in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSY-----FGGLL  336 (636)
T KOG2394|consen  264 KDGDQFAILTSKSKKTRNPVARW-HIGEGS-INEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSY-----FGGLL  336 (636)
T ss_pred             CCCCeeEEeeeeccccCCcccee-Eecccc-ccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhh-----ccceE
Confidence              1              111112 122334 889999999999999999999999999887765443222     23489


Q ss_pred             EEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeec
Q psy7482         150 SVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLN  195 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~  195 (327)
                      |++|+|||+++++|+ |.-|.||.+...+.+..-. |.+.|..++|.|
T Consensus       337 CvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  337 CVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             EEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence            999999999999998 9999999999998888766 999999999987

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.72  E-value=1.2e-12  Score=107.70  Aligned_cols=292  Identities=13%  Similarity=0.256  Sum_probs=183.8

Q ss_pred             EEEecCC----CeEEEEEc--ccccc--ccccccccccEEEEEECCCCCeEEEecC----CCcEEEEEcCC--CeEEEeE
Q psy7482          27 AASSGAD----ETVVLYDM--VKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSD----DGSIAIFRVGS--WQLEKLF   92 (327)
Q Consensus        27 l~~~~~d----g~v~~w~~--~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iw~~~~--~~~~~~~   92 (327)
                      ++.|+..    +.|.+|++  .+++.  +.... -......++++|++++|.+...    ++.|..|++..  +++...-
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~   80 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN   80 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence            3445544    68999988  33332  22222 3344677899999999988866    57899998875  3433322


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcCC-Cceeeeeecc---c-----cCccccceEEEEEccCCcEEEe
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVK-GRSAYITNLS---S-----YGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~-~~~~~~~~~~---~-----~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      .....+.....++++|++++|+++.. +|.+.++++.. +.........   .     .........++.++|+++++++
T Consensus        81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v  160 (345)
T PF10282_consen   81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV  160 (345)
T ss_dssp             EEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred             eeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence            12213333778999999999998874 89999999987 4333321111   0     0011223789999999998888


Q ss_pred             ec--CCeEEEEEecCCc--ee--e--EecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcC--CCce--eEEeeec---
Q psy7482         163 PI--QNKAVVFSVEKAG--VL--Q--TLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLT--DGSH--LWQIKAS---  225 (327)
Q Consensus       163 ~~--~~~i~i~d~~~~~--~~--~--~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~--~~~~--~~~~~~~---  225 (327)
                      ..  ...|.+|++....  ..  .  .+........+.|+|+ ++ +++.-.++.|.++++.  ++..  +..+...   
T Consensus       161 ~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~  240 (345)
T PF10282_consen  161 PDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEG  240 (345)
T ss_dssp             EETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETT
T ss_pred             EecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeecccc
Confidence            75  6789999997655  32  2  2235678899999999 44 4556678889999988  3322  2222211   


Q ss_pred             ---ccceEEEEEEecCCCcEEEEecC-CCeEEEEEcC--CCc--eeEEeecccCceEEEeeeC--cEEEEEe-cCCcEEE
Q psy7482         226 ---ASRIKGLVFFSIPQETTVCTGNE-ESAITAYNLT--DGS--HLWHIKASASRIKGLASHR--NHLICIT-SAGDLVV  294 (327)
Q Consensus       226 ---~~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~~~--~~l~~~~-~dg~v~i  294 (327)
                         ......+++  +|+|++|.++.. .+.|.+|++.  +++  .+..+.......+.++++|  ++|+++. .++.|.+
T Consensus       241 ~~~~~~~~~i~i--spdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~v  318 (345)
T PF10282_consen  241 FTGENAPAEIAI--SPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSV  318 (345)
T ss_dssp             SCSSSSEEEEEE---TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEE
T ss_pred             ccccCCceeEEE--ecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEE
Confidence               114567777  499999887654 5789999994  233  3344444444579999998  7777666 5678999


Q ss_pred             EEccCccCCCceeeeecCCCCceEEEEe
Q psy7482         295 WELNEDVTREPQRVSATNDGCRFTCLAI  322 (327)
Q Consensus       295 w~~~~~~~~~~~~~~~~~~~~~i~~l~~  322 (327)
                      |+++... -.+........-....|+.|
T Consensus       319 f~~d~~t-G~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  319 FDIDPDT-GKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             EEEETTT-TEEEEEEEEEESSSEEEEEE
T ss_pred             EEEeCCC-CcEEEecccccCCCCEEEeC
Confidence            9886431 13344433333445778776

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG4497|consensus

Probab=99.71  E-value=1.4e-14  Score=110.41  Aligned_cols=264  Identities=14%  Similarity=0.204  Sum_probs=177.3

Q ss_pred             ccEEEEEe--CCCE-EEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEE
Q psy7482          15 ASVRSVAA--TSKL-AASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        15 ~~v~~~~~--~~~~-l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      +.|.-+.|  +..+ |.....|+.|.+|++...+-...+.....++.+++|+|||+.| .+...+-.|.+|.+.+.+...
T Consensus        49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~  128 (447)
T KOG4497|consen   49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL  128 (447)
T ss_pred             HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE
Confidence            34555666  4444 4456788999999999988888888888999999999999655 566678899999998765443


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCC------------------------------------CEEEEEcCCCceee
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDK------------------------------------TLRTWNLVKGRSAY  134 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------------------------------------~i~iwd~~~~~~~~  134 (327)
                      .   .|....+..++|+|||++.+.+++-.                                    .+.+||---.-.+.
T Consensus       129 ~---~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~  205 (447)
T KOG4497|consen  129 L---PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVY  205 (447)
T ss_pred             e---cccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheee
Confidence            2   33333378899999999877766421                                    13344421111111


Q ss_pred             eeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCcee----------------------------------
Q psy7482         135 ITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVL----------------------------------  179 (327)
Q Consensus       135 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~----------------------------------  179 (327)
                      .....      -.+..++|+|.++++++|+ |+.+++.+--+-+..                                  
T Consensus       206 aYe~~------lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf  279 (447)
T KOG4497|consen  206 AYERG------LGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSF  279 (447)
T ss_pred             eeeec------cceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhccccccc
Confidence            11111      1288999999999999998 988887653221100                                  


Q ss_pred             --------------------------eEec-------CCCceeEEEeecCceEEEeCC---CCcEEEEEcCCCceeEEee
Q psy7482         180 --------------------------QTLK-------SESKVHSVCFLNETTVCTGNE---ESAITAYNLTDGSHLWQIK  223 (327)
Q Consensus       180 --------------------------~~~~-------~~~~i~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~  223 (327)
                                                ..++       ....+.-++|++|..+++.-.   -+.+.+||+++.+....+ 
T Consensus       280 ~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL-  358 (447)
T KOG4497|consen  280 TPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL-  358 (447)
T ss_pred             CCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh-
Confidence                                      0011       122466789999955544433   356899999877643333 


Q ss_pred             ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCc
Q psy7482         224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGD  291 (327)
Q Consensus       224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~  291 (327)
                      ....+|....|.  |....|+.+.....+++|.......+. .....-.|..+.|..  ..++..+.|-.
T Consensus       359 iQk~piraf~Wd--P~~prL~vctg~srLY~W~psg~~~V~-vP~~GF~i~~l~W~~~g~~i~l~~kDaf  425 (447)
T KOG4497|consen  359 IQKHPIRAFEWD--PGRPRLVVCTGKSRLYFWAPSGPRVVG-VPKKGFNIQKLQWLQPGEFIVLCGKDAF  425 (447)
T ss_pred             hhccceeEEEeC--CCCceEEEEcCCceEEEEcCCCceEEe-cCCCCceeeeEEecCCCcEEEEEcCCce
Confidence            355689999995  777777777777789999876544333 233335788999987  78888887764

>KOG4190|consensus

Probab=99.71  E-value=1.1e-16  Score=129.90  Aligned_cols=287  Identities=13%  Similarity=0.150  Sum_probs=199.3

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc-------ccccccccccccEEEEEECCCCCeEEEe
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPEGSHLISC   72 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~   72 (327)
                      |+..+.-.+.||+..|+.++.  +.+-+++++.|.+|++|.++..       .+..+++.|..+|..+.|-.+.+++++ 
T Consensus       723 ~~~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S-  801 (1034)
T KOG4190|consen  723 FDHIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS-  801 (1034)
T ss_pred             cceeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee-
Confidence            344555566799999999988  7889999999999999998642       366778899999999999988877764 


Q ss_pred             cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec--CCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          73 SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP--SGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        73 ~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                       .||.|.+||.--++++...........+..+..-+  +...++.+ +...+++++|.+.++.....+.........-++
T Consensus       802 -cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R  880 (1034)
T KOG4190|consen  802 -CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTR  880 (1034)
T ss_pred             -ccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchhee
Confidence             47889999987777665332222222133344334  34445444 678899999999988877776665544455689


Q ss_pred             EEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEE-EEcCCCceeEEeeecc
Q psy7482         150 SVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITA-YNLTDGSHLWQIKASA  226 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i-~d~~~~~~~~~~~~~~  226 (327)
                      +++..|.|+.++++- +|.|.+.|.++|+.+..+. -......++--.|..++....|..+.+ |-.-++....+.+...
T Consensus       881 ~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldgimh~q~kppp  960 (1034)
T KOG4190|consen  881 AIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGIMHLQDKPPP  960 (1034)
T ss_pred             EEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCeeeeccCCCC
Confidence            999999999999995 9999999999999888776 333444444434567777778888888 8776665554444433


Q ss_pred             cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC-c---eeEEee--cccCceEEEeeeC--cEEEEEecCCcEEE
Q psy7482         227 SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG-S---HLWHIK--ASASRIKGLASHR--NHLICITSAGDLVV  294 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~-~---~~~~~~--~~~~~v~~~~~~~--~~l~~~~~dg~v~i  294 (327)
                      .+..-+.    .-|..|+++.....+.+|.-... .   .+..++  ...+..++++.-|  .-+..|.+.|.|.+
T Consensus       961 epahflq----svgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen  961 EPAHFLQ----SVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred             cchhhhh----ccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence            3332222    45667777777777888852211 1   111122  2235667787777  56667888888765

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.70  E-value=1.1e-14  Score=123.65  Aligned_cols=230  Identities=12%  Similarity=0.125  Sum_probs=148.5

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---CCEEEEEcCCCceeeeeeccccCccccceEEEE
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                      ..|.+||....+. ..+ ..+... +.+..|+||++.|+..+.+   ..|.+||+.+++..........      .....
T Consensus       184 ~~l~i~D~~g~~~-~~l-t~~~~~-v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~------~~~~~  254 (433)
T PRK04922        184 YALQVADSDGYNP-QTI-LRSAEP-ILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGI------NGAPS  254 (433)
T ss_pred             EEEEEECCCCCCc-eEe-ecCCCc-cccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCC------ccCce
Confidence            4688999865443 344 445545 8999999999999887643   4699999988776444333222      45789


Q ss_pred             EccCCcEEEee-c-CC--eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC-CCCc--EEEEEcCCCceeEEeee
Q psy7482         153 WSPEGLLYAIP-I-QN--KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN-EESA--ITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       153 ~~~~~~~l~~~-~-~~--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~d~~--i~i~d~~~~~~~~~~~~  224 (327)
                      |+|+|+.++.. + ++  .|++||+.+++......+.......+|+|| ..++..+ .+|.  |+++|+.+++.. .+..
T Consensus       255 ~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~  333 (433)
T PRK04922        255 FSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLTF  333 (433)
T ss_pred             ECCCCCEEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE-Eeec
Confidence            99999877654 2 33  699999988875443334445567899999 5565544 4444  666777666532 3322


Q ss_pred             cccceEEEEEEecCCCcEEEEecCCC---eEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecC-C--cEEEEE
Q psy7482         225 SASRIKGLVFFSIPQETTVCTGNEES---AITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSA-G--DLVVWE  296 (327)
Q Consensus       225 ~~~~v~~~~~~~s~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d-g--~v~iw~  296 (327)
                      +.......+|  +|+|++++..+.++   .|.+||+.+++.. .+. +........|+|  ++|+..+.+ |  .|.+++
T Consensus       334 ~g~~~~~~~~--SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~  409 (433)
T PRK04922        334 QGNYNARASV--SPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVS  409 (433)
T ss_pred             CCCCccCEEE--CCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEE
Confidence            3333446778  49999988765432   6999999887654 333 222345678998  666655543 3  477777


Q ss_pred             ccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482         297 LNEDVTREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                      +...   ....+.  .+.+.+...+|+|
T Consensus       410 ~~g~---~~~~l~--~~~g~~~~p~wsp  432 (433)
T PRK04922        410 TDGR---VRQRLV--SADGEVREPAWSP  432 (433)
T ss_pred             CCCC---ceEEcc--cCCCCCCCCccCC
Confidence            7544   333332  2345677888987

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.69  E-value=4.9e-14  Score=119.78  Aligned_cols=230  Identities=11%  Similarity=0.117  Sum_probs=150.3

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC---CCCEEEEEcCCCceeeeeeccccCccccceEEEE
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK---DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                      ..|.++|..... ...+ ..+... +.+..|+|||+.|+..+.   +..|.+||+.+++.........      .+....
T Consensus       182 ~~l~~~d~dg~~-~~~l-t~~~~~-v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g------~~~~~~  252 (435)
T PRK05137        182 KRLAIMDQDGAN-VRYL-TDGSSL-VLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPG------MTFAPR  252 (435)
T ss_pred             eEEEEECCCCCC-cEEE-ecCCCC-eEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCC------cccCcE
Confidence            478888886544 3444 455555 999999999998888764   4689999998887644332322      267889


Q ss_pred             EccCCcEEEee-c-C--CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC-CCC--cEEEEEcCCCceeEEeee
Q psy7482         153 WSPEGLLYAIP-I-Q--NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN-EES--AITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       153 ~~~~~~~l~~~-~-~--~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~d~--~i~i~d~~~~~~~~~~~~  224 (327)
                      |+|||+.++.. . +  ..|++||+.+++......+........|+|| ..++..+ .+|  .|+++|+..++. ..+..
T Consensus       253 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~  331 (435)
T PRK05137        253 FSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISF  331 (435)
T ss_pred             ECCCCCEEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeec
Confidence            99999877654 3 3  4588889888766444335556677899999 5565544 333  688888776544 34433


Q ss_pred             cccceEEEEEEecCCCcEEEEecCC---CeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEec-CC-----cEE
Q psy7482         225 SASRIKGLVFFSIPQETTVCTGNEE---SAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITS-AG-----DLV  293 (327)
Q Consensus       225 ~~~~v~~~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-dg-----~v~  293 (327)
                      +...+....|  +|+|+.|+..+.+   ..|.+||+..+.. ..+.. ...+....|+|  +.|+..+. .+     .+.
T Consensus       332 ~~~~~~~~~~--SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~-~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~  407 (435)
T PRK05137        332 GGGRYSTPVW--SPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS-GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLY  407 (435)
T ss_pred             CCCcccCeEE--CCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC-CCCCCCCeECCCCCEEEEEEccCCCCCcceEE
Confidence            4445666778  4999999876543   3688899765543 33322 23467788999  56555443 22     467


Q ss_pred             EEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         294 VWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       294 iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++++...   ....+.   ....+...+|+|-
T Consensus       408 ~~dl~g~---~~~~l~---~~~~~~~p~Wsp~  433 (435)
T PRK05137        408 TVDLTGR---NEREVP---TPGDASDPAWSPL  433 (435)
T ss_pred             EEECCCC---ceEEcc---CCCCccCcccCCC
Confidence            7777665   333332   2334677888874

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.68  E-value=1.6e-14  Score=107.89  Aligned_cols=154  Identities=14%  Similarity=0.327  Sum_probs=109.7

Q ss_pred             EEEEECCCCCeEEEecC----------CCcEEEEEcCC-CeEEEeEEecccCCceeeEEEecCCCEEEEE--eCCCCEEE
Q psy7482          58 TCLKFTPEGSHLISCSD----------DGSIAIFRVGS-WQLEKLFKKAHKGTAVNHISIHPSGKLALSV--GKDKTLRT  124 (327)
Q Consensus        58 ~~~~~~~~~~~l~~~~~----------d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~dg~i~i  124 (327)
                      ..+.|+|+|++|+.-..          -+...+|.++. ......+.....+. |.+++|+|+++.+++.  ..++.+.+
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~-I~~~~WsP~g~~favi~g~~~~~v~l   87 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGP-IHDVAWSPNGNEFAVIYGSMPAKVTL   87 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCc-eEEEEECcCCCEEEEEEccCCcccEE
Confidence            45789999988775433          13455665532 23444442333444 9999999999987654  35679999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec----CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceE
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTV  199 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l  199 (327)
                      ||++ ++.+..+  ..     ..+..+.|+|+|+++++++    .|.+.+||.++.+.+....+.. ++.++|+|+ .++
T Consensus        88 yd~~-~~~i~~~--~~-----~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~-~t~~~WsPdGr~~  158 (194)
T PF08662_consen   88 YDVK-GKKIFSF--GT-----QPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSD-ATDVEWSPDGRYL  158 (194)
T ss_pred             EcCc-ccEeEee--cC-----CCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCc-EEEEEEcCCCCEE
Confidence            9996 4443333  22     2378899999999999875    4789999999988888887654 789999999 677


Q ss_pred             EEeC------CCCcEEEEEcCCCceeEEe
Q psy7482         200 CTGN------EESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       200 ~~~~------~d~~i~i~d~~~~~~~~~~  222 (327)
                      +++.      .|+.++||+.. |+.+.+.
T Consensus       159 ~ta~t~~r~~~dng~~Iw~~~-G~~l~~~  186 (194)
T PF08662_consen  159 ATATTSPRLRVDNGFKIWSFQ-GRLLYKK  186 (194)
T ss_pred             EEEEeccceeccccEEEEEec-CeEeEec
Confidence            7665      37889999984 6665543

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.68  E-value=3.1e-13  Score=113.14  Aligned_cols=265  Identities=15%  Similarity=0.149  Sum_probs=173.9

Q ss_pred             eCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCce
Q psy7482          22 ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV  101 (327)
Q Consensus        22 ~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v  101 (327)
                      ..+..+++++.+|.|..+|..+|+.+...............  ++..++.++.++.+..+|..+|+........  .. +
T Consensus        63 v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~--~~-~  137 (377)
T TIGR03300        63 VAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLS--SE-V  137 (377)
T ss_pred             EECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccC--ce-e
Confidence            36778888888999999999999987665533321222222  4677888899999999999999987765221  12 2


Q ss_pred             eeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-cCCeEEEEEecCCceee
Q psy7482         102 NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-IQNKAVVFSVEKAGVLQ  180 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~~~~~~~  180 (327)
                      .+.... .+..++.++.+|.+..||.++|+.+................+.... ++ .++.+ .++.+..+|.++++.+.
T Consensus       138 ~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~-~~-~v~~~~~~g~v~ald~~tG~~~W  214 (377)
T TIGR03300       138 LSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA-DG-GVLVGFAGGKLVALDLQTGQPLW  214 (377)
T ss_pred             ecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE-CC-EEEEECCCCEEEEEEccCCCEee
Confidence            221111 2456777888999999999999987766544321000000111111 34 44444 47999999999998776


Q ss_pred             EecCCCc--------eeEEEee---cCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC
Q psy7482         181 TLKSESK--------VHSVCFL---NETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE  249 (327)
Q Consensus       181 ~~~~~~~--------i~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d  249 (327)
                      ......+        ...+.-+   .++.+++++.+|.++.||.++++.+......  ......    ..+..++.++.+
T Consensus       215 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~--~~~~p~----~~~~~vyv~~~~  288 (377)
T TIGR03300       215 EQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDAS--SYQGPA----VDDNRLYVTDAD  288 (377)
T ss_pred             eeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccC--CccCce----EeCCEEEEECCC
Confidence            5431110        0011111   2467888888999999999999887766521  112222    346677788899


Q ss_pred             CeEEEEEcCCCceeEEeeccc-CceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         250 SAITAYNLTDGSHLWHIKASA-SRIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       250 ~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      |.+..+|..+++.++...... ....+.......+++++.+|.|+++|..++
T Consensus       289 G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~tG  340 (377)
T TIGR03300       289 GVVVALDRRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSREDG  340 (377)
T ss_pred             CeEEEEECCCCcEEEccccccCCccccCEEECCEEEEEeCCCEEEEEECCCC
Confidence            999999999999887764322 122222334488899999999999998887

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.68  E-value=4.8e-14  Score=119.25  Aligned_cols=230  Identities=15%  Similarity=0.193  Sum_probs=140.6

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---CCEEEEEcCCCceeeeeeccccCccccceEEEE
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                      ..|.++|... .....+ ..+... +.+.+|+|||+.|+..+.+   ..|.+||+.+++..........      .....
T Consensus       176 ~~L~~~D~dG-~~~~~l-~~~~~~-v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~------~~~~~  246 (427)
T PRK02889        176 YQLQISDADG-QNAQSA-LSSPEP-IISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGS------NSAPA  246 (427)
T ss_pred             cEEEEECCCC-CCceEe-ccCCCC-cccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCC------ccceE
Confidence            4577777643 333344 445555 8899999999998877643   3599999998876544333322      56889


Q ss_pred             EccCCcEEEee-c-CCeEEEE--EecCCceeeEec-CCCceeEEEeecC-ceEEEeC-CCCcEEEEEc--CCCceeEEee
Q psy7482         153 WSPEGLLYAIP-I-QNKAVVF--SVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGN-EESAITAYNL--TDGSHLWQIK  223 (327)
Q Consensus       153 ~~~~~~~l~~~-~-~~~i~i~--d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~--~~~~~~~~~~  223 (327)
                      |+|||+.++.. . ++...+|  |...+. ...+. +........|+|| ..++..+ .++...+|.+  ..++. ..+.
T Consensus       247 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt  324 (427)
T PRK02889        247 WSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA-QRVT  324 (427)
T ss_pred             ECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce-EEEe
Confidence            99999887754 3 6654554  555444 33443 4445667889999 5555444 4556666654  44432 2222


Q ss_pred             ecccceEEEEEEecCCCcEEEEecCCC---eEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecC-Cc--EEEE
Q psy7482         224 ASASRIKGLVFFSIPQETTVCTGNEES---AITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSA-GD--LVVW  295 (327)
Q Consensus       224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d-g~--v~iw  295 (327)
                      .+........|  +|+|++++..+.++   .|.+||+.+++... +... .......|+|  +.|+.++.+ |.  +.+.
T Consensus       325 ~~g~~~~~~~~--SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~  400 (427)
T PRK02889        325 FTGSYNTSPRI--SPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRDESPSFAPNGRYILYATQQGGRSVLAAV  400 (427)
T ss_pred             cCCCCcCceEE--CCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCccCceECCCCCEEEEEEecCCCEEEEEE
Confidence            22223345677  59999998766554   69999998876543 3222 2346778999  566655544 44  4444


Q ss_pred             EccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         296 ELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++...   ....+.  .+.+.+...+|+|-
T Consensus       401 ~~~g~---~~~~l~--~~~g~~~~p~wsp~  425 (427)
T PRK02889        401 SSDGR---IKQRLS--VQGGDVREPSWGPF  425 (427)
T ss_pred             ECCCC---ceEEee--cCCCCCCCCccCCC
Confidence            44322   222332  24456778899884

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=1e-13  Score=117.92  Aligned_cols=231  Identities=13%  Similarity=0.143  Sum_probs=147.8

Q ss_pred             eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC
Q psy7482          35 TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK  111 (327)
Q Consensus        35 ~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  111 (327)
                      .|.++|...+. .+.+..+...+....|+|||+.|+..+.+   ..|.+||+.+++.....  ...+. +....|+|||+
T Consensus       180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~--~~~g~-~~~~~~SpDG~  255 (430)
T PRK00178        180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQIT--NFEGL-NGAPAWSPDGS  255 (430)
T ss_pred             EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEcc--CCCCC-cCCeEECCCCC
Confidence            47778876444 44555577789999999999998876543   36899999887654432  22233 56789999998


Q ss_pred             EEEE-EeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C--CeEEEEEecCCceeeEecC
Q psy7482         112 LALS-VGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q--NKAVVFSVEKAGVLQTLKS  184 (327)
Q Consensus       112 ~l~~-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~~i~i~d~~~~~~~~~~~~  184 (327)
                      .|+. ...+|  .|.++|+.+++........      .......|+|+++.++..+  +  ..|+++|+.+++.......
T Consensus       256 ~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~------~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~  329 (430)
T PRK00178        256 KLAFVLSKDGNPEIYVMDLASRQLSRVTNHP------AIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFV  329 (430)
T ss_pred             EEEEEEccCCCceEEEEECCCCCeEEcccCC------CCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC
Confidence            8774 44455  5888899887654332211      1255678999998777654  2  3677888877764433222


Q ss_pred             CCceeEEEeecC-ceEEEeCC-CC--cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC---CeEEEEEc
Q psy7482         185 ESKVHSVCFLNE-TTVCTGNE-ES--AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE---SAITAYNL  257 (327)
Q Consensus       185 ~~~i~~~~~~~~-~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d---~~i~i~d~  257 (327)
                      ........|+|+ +.++..+. ++  .|.++|+.+++.. .+.. ........|  +|+|+.++..+.+   ..|.++++
T Consensus       330 ~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~~~~~p~~--spdg~~i~~~~~~~g~~~l~~~~~  405 (430)
T PRK00178        330 GNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TSLDESPSV--APNGTMLIYATRQQGRGVLMLVSI  405 (430)
T ss_pred             CCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccC-CCCCCCceE--CCCCCEEEEEEecCCceEEEEEEC
Confidence            233445789998 55554443 33  5788998877542 2321 112224567  4899988776543   34777777


Q ss_pred             CCCceeEEeecccCceEEEeeeC
Q psy7482         258 TDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       258 ~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                      . +.....+..+.+.+...+|+|
T Consensus       406 ~-g~~~~~l~~~~g~~~~p~ws~  427 (430)
T PRK00178        406 N-GRVRLPLPTAQGEVREPSWSP  427 (430)
T ss_pred             C-CCceEECcCCCCCcCCCccCC
Confidence            4 444445555556677777776

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.67  E-value=9.5e-14  Score=118.03  Aligned_cols=230  Identities=15%  Similarity=0.165  Sum_probs=149.8

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      ..|.++|.. +...+.+..+...+...+|+|||++|+.+..+   ..|++||+.+++.....  .+... +.++.|+||+
T Consensus       170 ~~l~~~d~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~--~~~~~-~~~~~~spDg  245 (417)
T TIGR02800       170 YELQVADYD-GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVA--SFPGM-NGAPAFSPDG  245 (417)
T ss_pred             ceEEEEcCC-CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEee--cCCCC-ccceEECCCC
Confidence            458888875 33345555667778999999999999877643   47999999887654332  33344 6778999999


Q ss_pred             CEEEE-EeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C--CeEEEEEecCCceeeEec
Q psy7482         111 KLALS-VGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q--NKAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       111 ~~l~~-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~~i~i~d~~~~~~~~~~~  183 (327)
                      +.|+. .+.++  .|.+||+.+++........      .......|+|+++.++..+  +  ..|+++|+.+++......
T Consensus       246 ~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~------~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~  319 (417)
T TIGR02800       246 SKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGP------GIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTF  319 (417)
T ss_pred             CEEEEEECCCCCccEEEEECCCCCEEECCCCC------CCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec
Confidence            87764 44444  5888998877543332211      1144678999999877654  2  368888888776544333


Q ss_pred             CCCceeEEEeecC-ceEEEeCCCC---cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC---eEEEEE
Q psy7482         184 SESKVHSVCFLNE-TTVCTGNEES---AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES---AITAYN  256 (327)
Q Consensus       184 ~~~~i~~~~~~~~-~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~---~i~i~d  256 (327)
                      .........|+|+ .+++.++.++   .|.+||+.++.. ..+... .......|  +|+++.|+..+.++   .+++.+
T Consensus       320 ~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~-~~~~~p~~--spdg~~l~~~~~~~~~~~l~~~~  395 (417)
T TIGR02800       320 RGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDT-GLDESPSF--APNGRMILYATTRGGRGVLGLVS  395 (417)
T ss_pred             CCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCC-CCCCCceE--CCCCCEEEEEEeCCCcEEEEEEE
Confidence            5566778899998 6677666554   788999887543 233222 22344567  48999888766653   355555


Q ss_pred             cCCCceeEEeecccCceEEEee
Q psy7482         257 LTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      . ++.....+..+.+.+..++|
T Consensus       396 ~-~g~~~~~~~~~~g~~~~~~w  416 (417)
T TIGR02800       396 T-DGRFRARLPLGNGDVREPAW  416 (417)
T ss_pred             C-CCceeeECCCCCCCcCCCCC
Confidence            3 45555555544445555554

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.67  E-value=3.8e-13  Score=112.60  Aligned_cols=261  Identities=15%  Similarity=0.163  Sum_probs=171.7

Q ss_pred             eCCCEEEEecCCCeEEEEEccccccccccccccccEEE-EEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCc
Q psy7482          22 ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITC-LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA  100 (327)
Q Consensus        22 ~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~  100 (327)
                      .++..++.++.+|.+..+|..+|+.+....... .+.+ ...  .+..++.++.++.+..||.++++.+..+. ..... 
T Consensus       103 v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~-~~~~~-  177 (377)
T TIGR03300       103 ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSS-EVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYS-RVTPA-  177 (377)
T ss_pred             EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCc-eeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEc-cCCCc-
Confidence            366778888889999999999998876654322 2221 111  34567778889999999999998877662 22111 


Q ss_pred             e-----eeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc--cceEEEEEc---cCCcEEEeecCCeEEE
Q psy7482         101 V-----NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF--ENLDSVVWS---PEGLLYAIPIQNKAVV  170 (327)
Q Consensus       101 v-----~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~v~~~~~~---~~~~~l~~~~~~~i~i  170 (327)
                      .     ......  +..++.+..+|.+..+|+++|+..............  .....+.-+   .++.+++.+.+|.++.
T Consensus       178 ~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a  255 (377)
T TIGR03300       178 LTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAA  255 (377)
T ss_pred             eeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEE
Confidence            1     111222  346778888899999999999876654432110000  000011111   1444555555999999


Q ss_pred             EEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeeccc-ceEEEEEEecCCCcEEEEecCC
Q psy7482         171 FSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASAS-RIKGLVFFSIPQETTVCTGNEE  249 (327)
Q Consensus       171 ~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~s~~~~~l~~~~~d  249 (327)
                      +|.++++.+....... ...... .++.+++++.+|.+..+|..+++.+.+...... ......    ..+..+++++.+
T Consensus       256 ~d~~tG~~~W~~~~~~-~~~p~~-~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~----i~g~~l~~~~~~  329 (377)
T TIGR03300       256 LDLRSGRVLWKRDASS-YQGPAV-DDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPA----VVGGYLVVGDFE  329 (377)
T ss_pred             EECCCCcEEEeeccCC-ccCceE-eCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCE----EECCEEEEEeCC
Confidence            9999998877665322 122222 247788888999999999999988876532222 122222    246688899999


Q ss_pred             CeEEEEEcCCCceeEEeecccCce-EEEeeeCcEEEEEecCCcEEEE
Q psy7482         250 SAITAYNLTDGSHLWHIKASASRI-KGLASHRNHLICITSAGDLVVW  295 (327)
Q Consensus       250 ~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iw  295 (327)
                      |.++++|..+++.+..++.+...+ .+..+..+.|+.++.||.|+.|
T Consensus       330 G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~~dG~l~~~  376 (377)
T TIGR03300       330 GYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQTRDGDLYAF  376 (377)
T ss_pred             CEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEeCCceEEEe
Confidence            999999999999999988766432 2334444778999999999876

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.66  E-value=1.5e-11  Score=95.54  Aligned_cols=290  Identities=12%  Similarity=0.236  Sum_probs=189.1

Q ss_pred             CCeEEEEEcccccc---ccccccccccEEEEEECCCCCeEEEecC---CCcEEEEEcCC--CeEEEeEEecccCCceeeE
Q psy7482          33 DETVVLYDMVKRKQ---SGALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGS--WQLEKLFKKAHKGTAVNHI  104 (327)
Q Consensus        33 dg~v~~w~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~--~~~~~~~~~~~~~~~v~~~  104 (327)
                      +.-|++|++.+.+-   ...+-...+.++-|+|+|+++.|.++..   +|.|.-|.++.  |++...-...-.+.+.+.+
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv   94 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV   94 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence            45699999874321   1122346677899999999999988755   47788887764  5554333233334435889


Q ss_pred             EEecCCCEEEEEeC-CCCEEEEEcCC-Cceeeeeecc---ccCcc----ccceEEEEEccCCcEEEeec--CCeEEEEEe
Q psy7482         105 SIHPSGKLALSVGK-DKTLRTWNLVK-GRSAYITNLS---SYGVG----FENLDSVVWSPEGLLYAIPI--QNKAVVFSV  173 (327)
Q Consensus       105 ~~~~~~~~l~~~~~-dg~i~iwd~~~-~~~~~~~~~~---~~~~~----~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~  173 (327)
                      ++++++++++++.. .|.|.++-++. |.........   ....+    ...+....+.|+++++++..  ...|.+|++
T Consensus        95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~  174 (346)
T COG2706          95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL  174 (346)
T ss_pred             EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence            99999999998875 57899998865 4332221111   11111    11277889999999999986  678999999


Q ss_pred             cCCceee----EecCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCC-ceeEEeee-------cccceEEEEEEecCC
Q psy7482         174 EKAGVLQ----TLKSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDG-SHLWQIKA-------SASRIKGLVFFSIPQ  239 (327)
Q Consensus       174 ~~~~~~~----~~~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~-~~~~~~~~-------~~~~v~~~~~~~s~~  239 (327)
                      ..++...    .++.......|.|+|+ ++. ++.--+++|.+|..... ..+..++.       ..+...+.+++-+++
T Consensus       175 ~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~d  254 (346)
T COG2706         175 DDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPD  254 (346)
T ss_pred             ccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCC
Confidence            9776443    2346678899999999 443 34556889999998773 23333322       223333344444699


Q ss_pred             CcEEEEecC-CCeEEEEEcCCCc-eeE---EeecccCceEEEeeeC--cEEEEEecCC-cEEEEEccCccCCCceeeeec
Q psy7482         240 ETTVCTGNE-ESAITAYNLTDGS-HLW---HIKASASRIKGLASHR--NHLICITSAG-DLVVWELNEDVTREPQRVSAT  311 (327)
Q Consensus       240 ~~~l~~~~~-d~~i~i~d~~~~~-~~~---~~~~~~~~v~~~~~~~--~~l~~~~~dg-~v~iw~~~~~~~~~~~~~~~~  311 (327)
                      |++|.++.. ...|.+|.+.... .+.   ....+....+...+++  ++|+++..++ .|.+|..+... -....+...
T Consensus       255 GrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~T-G~L~~~~~~  333 (346)
T COG2706         255 GRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKET-GRLTLLGRY  333 (346)
T ss_pred             CCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCC-ceEEecccc
Confidence            999998865 3478888876432 222   2223334478888888  8888887765 59999887652 133344444


Q ss_pred             CCCCceEEEEeC
Q psy7482         312 NDGCRFTCLAIR  323 (327)
Q Consensus       312 ~~~~~i~~l~~~  323 (327)
                      .......|+.|.
T Consensus       334 ~~~p~Pvcv~f~  345 (346)
T COG2706         334 AVVPEPVCVKFL  345 (346)
T ss_pred             cCCCCcEEEEEc
Confidence            455667788875

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.66  E-value=1.6e-13  Score=116.54  Aligned_cols=231  Identities=15%  Similarity=0.159  Sum_probs=145.9

Q ss_pred             eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC
Q psy7482          35 TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK  111 (327)
Q Consensus        35 ~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  111 (327)
                      .+.++|..... .+.+..+...+.+..|+|||+.|+..+.+   ..|.+||+.+++.....  ...+. .....|+|||+
T Consensus       199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt--~~~g~-~~~~~wSPDG~  274 (448)
T PRK04792        199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVT--SFPGI-NGAPRFSPDGK  274 (448)
T ss_pred             EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEec--CCCCC-cCCeeECCCCC
Confidence            57777865443 34455567788999999999988876542   35888999887653322  22222 45789999999


Q ss_pred             EEEE-EeCCCC--EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C--CeEEEEEecCCceeeEecC
Q psy7482         112 LALS-VGKDKT--LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q--NKAVVFSVEKAGVLQTLKS  184 (327)
Q Consensus       112 ~l~~-~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~--~~i~i~d~~~~~~~~~~~~  184 (327)
                      .|+. .+.+|.  |.++|+.+++........      .......|+||++.++..+  +  ..|+++|+.+++.......
T Consensus       275 ~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~------~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~  348 (448)
T PRK04792        275 KLALVLSKDGQPEIYVVDIATKALTRITRHR------AIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFE  348 (448)
T ss_pred             EEEEEEeCCCCeEEEEEECCCCCeEECccCC------CCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecC
Confidence            7765 455664  777888877654332211      1256789999999877654  3  3577778877765433222


Q ss_pred             CCceeEEEeecC-ceEEEeC-CCC--cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC-C--eEEEEEc
Q psy7482         185 ESKVHSVCFLNE-TTVCTGN-EES--AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE-S--AITAYNL  257 (327)
Q Consensus       185 ~~~i~~~~~~~~-~~l~~~~-~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d-~--~i~i~d~  257 (327)
                      .......+|+|| +.++..+ .++  .|.++|+.+++.. .+.... ......|  +|+|+.|+..+.+ +  .+++++.
T Consensus       349 g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~~-~d~~ps~--spdG~~I~~~~~~~g~~~l~~~~~  424 (448)
T PRK04792        349 GEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTSTR-LDESPSV--APNGTMVIYSTTYQGKQVLAAVSI  424 (448)
T ss_pred             CCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCCC-CCCCceE--CCCCCEEEEEEecCCceEEEEEEC
Confidence            233445789999 5555443 344  4556787777543 232221 1223456  4899987765543 3  3777786


Q ss_pred             CCCceeEEeecccCceEEEeeeC
Q psy7482         258 TDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       258 ~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                       ++.....+..+.+.+...+|+|
T Consensus       425 -~G~~~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        425 -DGRFKARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             -CCCceEECcCCCCCcCCCccCC
Confidence             5666666766666777788876

>KOG1409|consensus

Probab=99.66  E-value=1.9e-14  Score=110.17  Aligned_cols=256  Identities=13%  Similarity=0.206  Sum_probs=186.6

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEE-cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR-VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR  123 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  123 (327)
                      ..++.+++|.+.+++...-|..+-+++.+.|.++++|- .++++.-..+....... ++++.+.++...|+.|-..|++.
T Consensus        15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~-~~~~~y~~e~~~L~vg~~ngtvt   93 (404)
T KOG1409|consen   15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSP-CSAMEYVSESRRLYVGQDNGTVT   93 (404)
T ss_pred             hhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCC-ceEeeeeccceEEEEEEecceEE
Confidence            45667889999999999999888899999999999994 45566555552333344 99999999999999999999999


Q ss_pred             EEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEe
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTG  202 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~  202 (327)
                      -+.+...-.. .........|...+..+-|+-....+++.+ |..+.---.+.+..+..+.....-+++.+.- .+...|
T Consensus        94 efs~sedfnk-m~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~-~~~fvG  171 (404)
T KOG1409|consen   94 EFALSEDFNK-MTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDA-LYAFVG  171 (404)
T ss_pred             EEEhhhhhhh-cchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceee-EEEEec
Confidence            8876532111 111222334556688999988888877777 5555443444444443333222222222211 255667


Q ss_pred             CCCCcEEEEEcC--CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-eeEEeecccCceEEEeee
Q psy7482         203 NEESAITAYNLT--DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-HLWHIKASASRIKGLASH  279 (327)
Q Consensus       203 ~~d~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~  279 (327)
                      ...|.|..-.+.  .-.++.++.+|.+.+++++|.  +..+.|++|..|..+.+||+.-.+ ....+.+|...|..+...
T Consensus       172 d~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd--~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~  249 (404)
T KOG1409|consen  172 DHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWD--PGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYA  249 (404)
T ss_pred             ccccceEEEEEeecCCceEEEEcCcccceEEEEEc--CCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhh
Confidence            777777666543  345688899999999999994  889999999999999999997665 557888999999999988


Q ss_pred             C--cEEEEEecCCcEEEEEccCccCCCc
Q psy7482         280 R--NHLICITSAGDLVVWELNEDVTREP  305 (327)
Q Consensus       280 ~--~~l~~~~~dg~v~iw~~~~~~~~~~  305 (327)
                      +  +.++++++||.|.+|+++....+.|
T Consensus       250 ~~t~~l~S~~edg~i~~w~mn~~r~etp  277 (404)
T KOG1409|consen  250 QHTRQLISCGEDGGIVVWNMNVKRVETP  277 (404)
T ss_pred             hhheeeeeccCCCeEEEEeccceeecCc
Confidence            8  9999999999999999988743333

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.66  E-value=4.2e-14  Score=105.70  Aligned_cols=135  Identities=21%  Similarity=0.336  Sum_probs=97.0

Q ss_pred             eEEEEEccc-ccccccccc-ccccEEEEEECCCCCeEEEe--cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          35 TVVLYDMVK-RKQSGALMQ-HEGTITCLKFTPEGSHLISC--SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        35 ~v~~w~~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      ...+|.+.. +.....+.- ..++|.+++|+|+|+.|++.  ..++.|.+||++ ++.+..+   .... ++.+.|+|+|
T Consensus        38 ~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~---~~~~-~n~i~wsP~G  112 (194)
T PF08662_consen   38 EFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSF---GTQP-RNTISWSPDG  112 (194)
T ss_pred             eEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEee---cCCC-ceEEEECCCC
Confidence            455555532 233444432 34579999999999987654  457799999997 5666655   2344 8899999999


Q ss_pred             CEEEEEeC---CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-------CCeEEEEEecCCceee
Q psy7482         111 KLALSVGK---DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-------QNKAVVFSVEKAGVLQ  180 (327)
Q Consensus       111 ~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~~i~i~d~~~~~~~~  180 (327)
                      ++|++++.   .|.|.+||.++.+.+......       .+..++|+|+|++++++.       |+.++||+.. |+.+.
T Consensus       113 ~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~-------~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~  184 (194)
T PF08662_consen  113 RFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS-------DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLY  184 (194)
T ss_pred             CEEEEEEccCCCcEEEEEECCCCEEeeccccC-------cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeE
Confidence            99999875   367999999977665443221       278999999999998873       6789999985 55554


Q ss_pred             Ee
Q psy7482         181 TL  182 (327)
Q Consensus       181 ~~  182 (327)
                      ..
T Consensus       185 ~~  186 (194)
T PF08662_consen  185 KK  186 (194)
T ss_pred             ec
Confidence            43

>KOG2041|consensus

Probab=99.66  E-value=6.9e-14  Score=117.14  Aligned_cols=278  Identities=12%  Similarity=0.138  Sum_probs=200.1

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccc---------------cccccccccccEEEEEECCCCCeEEEecCC
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK---------------QSGALMQHEGTITCLKFTPEGSHLISCSDD   75 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d   75 (327)
                      ......|++|  ...++|+||.||.+++..+.+..               .-+++.+|++.|.-+.|+.+.+.|-+...+
T Consensus        13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~   92 (1189)
T KOG2041|consen   13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS   92 (1189)
T ss_pred             CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence            3456889999  78899999999999999876432               235678999999999999999999999999


Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      |.|.+|-+-.+............+.|.+++|+.+|..++....||.|.+=.++ |..+.-..+...     ....+.|++
T Consensus        93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd-GNRIwgKeLkg~-----~l~hv~ws~  166 (1189)
T KOG2041|consen   93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD-GNRIWGKELKGQ-----LLAHVLWSE  166 (1189)
T ss_pred             ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec-cceecchhcchh-----eccceeecc
Confidence            99999999877655544234444449999999999999999999999887765 333333333322     156789999


Q ss_pred             CCcEEEeec-CCeEEEEEecCCcee-------eEe----c-CCCceeEEEee--------cC-ceEEEeCCCCcEEEEEc
Q psy7482         156 EGLLYAIPI-QNKAVVFSVEKAGVL-------QTL----K-SESKVHSVCFL--------NE-TTVCTGNEESAITAYNL  213 (327)
Q Consensus       156 ~~~~l~~~~-~~~i~i~d~~~~~~~-------~~~----~-~~~~i~~~~~~--------~~-~~l~~~~~d~~i~i~d~  213 (327)
                      |.+.+..+- +|.+.+||.+..-..       -..    . .+..|..+.|.        |+ ..++++...|.+.+..-
T Consensus       167 D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~  246 (1189)
T KOG2041|consen  167 DLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRS  246 (1189)
T ss_pred             cHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhh
Confidence            998887776 899999997643111       011    1 23346666664        45 68999999999988765


Q ss_pred             CCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC---------eEEEEEcCCCceeEEeecccCceEEEeeeC-cEE
Q psy7482         214 TDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES---------AITAYNLTDGSHLWHIKASASRIKGLASHR-NHL  283 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~---------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l  283 (327)
                      .+......+.. ...+..+.|+  ++|..|+.++.+.         .|.+|. .-|+.+.+++.....|++++|-. .+=
T Consensus       247 eND~~Pvv~dt-gm~~vgakWn--h~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~gLr  322 (1189)
T KOG2041|consen  247 ENDPEPVVVDT-GMKIVGAKWN--HNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHIVGTLKVPGSCITGLSWEGTGLR  322 (1189)
T ss_pred             cCCCCCeEEec-ccEeecceec--CCCcEEEEccCcccccCccccceEEEec-cchhheEEEecCCceeeeeEEcCCceE
Confidence            54433333332 2568889995  9999999988653         455554 45677888888888899999987 333


Q ss_pred             EEEecCCcEEEEEccCc
Q psy7482         284 ICITSAGDLVVWELNED  300 (327)
Q Consensus       284 ~~~~~dg~v~iw~~~~~  300 (327)
                      ++-..|+.|++=++++.
T Consensus       323 iA~AvdsfiyfanIRP~  339 (1189)
T KOG2041|consen  323 IAIAVDSFIYFANIRPE  339 (1189)
T ss_pred             EEEEecceEEEEeeccc
Confidence            33334666666555443

>KOG1354|consensus

Probab=99.65  E-value=5e-14  Score=107.95  Aligned_cols=243  Identities=12%  Similarity=0.163  Sum_probs=170.9

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe-----EEEeEEeccc-----------CCceeeEEEecCC--CEEEE
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-----LEKLFKKAHK-----------GTAVNHISIHPSG--KLALS  115 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~~-----------~~~v~~~~~~~~~--~~l~~  115 (327)
                      .+-|.++.|...|++|++|..+|.|.++.-....     ....+ +.|.           ...|+.+.|.+++  ..++.
T Consensus        25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~f-qshepEFDYLkSleieEKinkIrw~~~~n~a~FLl  103 (433)
T KOG1354|consen   25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEF-QSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL  103 (433)
T ss_pred             hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeee-eccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence            4568999999999999999999999999653322     11222 2222           1238889999865  46777


Q ss_pred             EeCCCCEEEEEcCCCceee------------------eeeccc-------------cCccccceEEEEEccCCcEEEeec
Q psy7482         116 VGKDKTLRTWNLVKGRSAY------------------ITNLSS-------------YGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus       116 ~~~dg~i~iwd~~~~~~~~------------------~~~~~~-------------~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      .+.|.+|++|.+.......                  ......             ...|..-++++.++.|.+.+.++.
T Consensus       104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD  183 (433)
T KOG1354|consen  104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD  183 (433)
T ss_pred             ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeecc
Confidence            7889999999886532211                  000000             023445589999999999999999


Q ss_pred             CCeEEEEEecCCceee---Eec-C-----CCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCce----eEEe-------
Q psy7482         165 QNKAVVFSVEKAGVLQ---TLK-S-----ESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSH----LWQI-------  222 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~---~~~-~-----~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~----~~~~-------  222 (327)
                      |=.|.+|+++--..-.   .++ +     ..-|++..|+|.  +.++-.+..|+|++.|++....    ...+       
T Consensus       184 dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~  263 (433)
T KOG1354|consen  184 DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPS  263 (433)
T ss_pred             ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCc
Confidence            9999999986433222   222 1     245889999997  8899999999999999985321    0111       


Q ss_pred             -----eecccceEEEEEEecCCCcEEEEecCCCeEEEEEc-CCCceeEEeecccC------------ce---EEEeeeC-
Q psy7482         223 -----KASASRIKGLVFFSIPQETTVCTGNEESAITAYNL-TDGSHLWHIKASAS------------RI---KGLASHR-  280 (327)
Q Consensus       223 -----~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~~~~~------------~v---~~~~~~~-  280 (327)
                           ..--..|..+.|+  ++|+|+++-+. -+|++||+ ...+++.+++.|..            .|   ..++|+. 
T Consensus       264 ~rsffseiIsSISDvKFs--~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~  340 (433)
T KOG1354|consen  264 SRSFFSEIISSISDVKFS--HSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGN  340 (433)
T ss_pred             chhhHHHHhhhhhceEEc--cCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCC
Confidence                 1112357888994  89999998754 68999999 46667877777631            22   3467877 


Q ss_pred             -cEEEEEecCCcEEEEEccCc
Q psy7482         281 -NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 -~~l~~~~~dg~v~iw~~~~~  300 (327)
                       .+++||+..+.+++++...+
T Consensus       341 ~~~v~TGsy~n~frvf~~~~g  361 (433)
T KOG1354|consen  341 DSYVMTGSYNNVFRVFNLARG  361 (433)
T ss_pred             cceEecccccceEEEecCCCC
Confidence             79999999999999996655

>KOG1354|consensus

Probab=99.65  E-value=6.1e-14  Score=107.51  Aligned_cols=245  Identities=16%  Similarity=0.259  Sum_probs=166.5

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccc-----cccccccc------------cccEEEEEECCCCC--eEEE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-----QSGALMQH------------EGTITCLKFTPEGS--HLIS   71 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~-----~~~~~~~~------------~~~v~~~~~~~~~~--~l~~   71 (327)
                      ..+-|.++.|  .|.+||||..+|.|.++.-....     ....++.|            ...|..+.|.++++  .++.
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl  103 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL  103 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence            3466888999  89999999999999999643322     12223333            35689999998654  5667


Q ss_pred             ecCCCcEEEEEcCCCe-----------------------------------EEEeEEecccCCceeeEEEecCCCEEEEE
Q psy7482          72 CSDDGSIAIFRVGSWQ-----------------------------------LEKLFKKAHKGTAVNHISIHPSGKLALSV  116 (327)
Q Consensus        72 ~~~d~~i~iw~~~~~~-----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  116 (327)
                      .+.|.+|++|.+....                                   +.+.+..+|.-. |+++.++.|...++++
T Consensus       104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyh-iNSIS~NsD~Et~lSA  182 (433)
T KOG1354|consen  104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYH-INSISVNSDKETFLSA  182 (433)
T ss_pred             ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeE-eeeeeecCccceEeec
Confidence            7889999999874321                                   112222445555 8999999999888876


Q ss_pred             eCCCCEEEEEcCCCceee-eeecccc--CccccceEEEEEccCC-cEEEee-cCCeEEEEEecCCceeeE----ec----
Q psy7482         117 GKDKTLRTWNLVKGRSAY-ITNLSSY--GVGFENLDSVVWSPEG-LLYAIP-IQNKAVVFSVEKAGVLQT----LK----  183 (327)
Q Consensus       117 ~~dg~i~iwd~~~~~~~~-~~~~~~~--~~~~~~v~~~~~~~~~-~~l~~~-~~~~i~i~d~~~~~~~~~----~~----  183 (327)
                      . |=.|.+|+++-..... .......  ..-..-|++..|+|.. ++++.+ +.|+|++.|++.......    +.    
T Consensus       183 D-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEeped  261 (433)
T KOG1354|consen  183 D-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPED  261 (433)
T ss_pred             c-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccC
Confidence            4 6789999987433221 2222221  1112347889999954 444444 499999999985432111    11    


Q ss_pred             ---------CCCceeEEEeecCceEEEeCCCCcEEEEEc-CCCceeEEeeeccc---------------ceEEEEEEecC
Q psy7482         184 ---------SESKVHSVCFLNETTVCTGNEESAITAYNL-TDGSHLWQIKASAS---------------RIKGLVFFSIP  238 (327)
Q Consensus       184 ---------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~~~~~---------------~v~~~~~~~s~  238 (327)
                               --..|..+.|++++.++..-.--+|++||+ ...+++.+++.|..               .-..++|  +.
T Consensus       262 p~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~--sg  339 (433)
T KOG1354|consen  262 PSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSW--SG  339 (433)
T ss_pred             CcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEE--cC
Confidence                     124588899999966666566679999999 45667777776653               1234566  47


Q ss_pred             CCcEEEEecCCCeEEEEEcCCCc
Q psy7482         239 QETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       239 ~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      ++.++++|+.....+++++..|.
T Consensus       340 ~~~~v~TGsy~n~frvf~~~~gs  362 (433)
T KOG1354|consen  340 NDSYVMTGSYNNVFRVFNLARGS  362 (433)
T ss_pred             CcceEecccccceEEEecCCCCc
Confidence            88899999999999999976664

>KOG3881|consensus

Probab=99.64  E-value=3.8e-14  Score=110.22  Aligned_cols=216  Identities=9%  Similarity=0.082  Sum_probs=158.8

Q ss_pred             cCCccEEEEEeCCCEEEEecCCCeEEEEEccccc----cccccccccccEEEEEECCCCCe-EEEecCC--CcEEEEEcC
Q psy7482          12 SHTASVRSVAATSKLAASSGADETVVLYDMVKRK----QSGALMQHEGTITCLKFTPEGSH-LISCSDD--GSIAIFRVG   84 (327)
Q Consensus        12 ~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d--~~i~iw~~~   84 (327)
                      +..++|..+......|++|-.+|.+.+|..+.+.    ++..+..+ ..+..+.-++...+ +++|+..  ..+.+||++
T Consensus       103 l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle  181 (412)
T KOG3881|consen  103 LGTKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLE  181 (412)
T ss_pred             cccccccchhhcCCEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecc
Confidence            4556677777755567777889999999988543    22333333 45667777775554 5568888  889999998


Q ss_pred             CCeEEEeEEecccCC-------ceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCce-eeeeeccccCccccceEEEEEc
Q psy7482          85 SWQLEKLFKKAHKGT-------AVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRS-AYITNLSSYGVGFENLDSVVWS  154 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~-------~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~  154 (327)
                      ..+.+..-+....+.       -++++.|.+.  ...|++++.-+.+++||.+.++. +..+.+.     ..++.++...
T Consensus       182 ~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~-----E~~is~~~l~  256 (412)
T KOG3881|consen  182 QSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFL-----ENPISSTGLT  256 (412)
T ss_pred             cceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccc-----cCcceeeeec
Confidence            875544331111110       1567888886  78899999999999999986543 3344443     3459999999


Q ss_pred             cCCcEEEeec-CCeEEEEEecCCceeeE-ec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceE
Q psy7482         155 PEGLLYAIPI-QNKAVVFSVEKAGVLQT-LK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIK  230 (327)
Q Consensus       155 ~~~~~l~~~~-~~~i~i~d~~~~~~~~~-~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~  230 (327)
                      |+++++.+|. -+.+..||.+.++.... ++ ..+.|.++..+|. .++++++-|..+||+|+++.+++..... ...++
T Consensus       257 p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYv-Ks~lt  335 (412)
T KOG3881|consen  257 PSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYV-KSRLT  335 (412)
T ss_pred             CCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhh-hcccc
Confidence            9999999997 89999999999998877 55 6789999999998 8999999999999999999776655432 22355


Q ss_pred             EEEE
Q psy7482         231 GLVF  234 (327)
Q Consensus       231 ~~~~  234 (327)
                      ++.+
T Consensus       336 ~il~  339 (412)
T KOG3881|consen  336 FILL  339 (412)
T ss_pred             EEEe
Confidence            5655

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.64  E-value=3.8e-11  Score=96.66  Aligned_cols=250  Identities=10%  Similarity=0.088  Sum_probs=164.3

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC----------CCcEEEEEcCCCeEEEeEEeccc-----C
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD----------DGSIAIFRVGSWQLEKLFKKAHK-----G   98 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~iw~~~~~~~~~~~~~~~~-----~   98 (327)
                      ++|.+.|..+++.+..+..-..+- .+ ++||++.|+++..          +..|.+||..+.+.+..+..+..     .
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~  104 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG  104 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence            899999999999888887544333 34 9999998887655          67999999999999988843222     1


Q ss_pred             CceeeEEEecCCCEEEEEe-C-CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecC-
Q psy7482          99 TAVNHISIHPSGKLALSVG-K-DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEK-  175 (327)
Q Consensus        99 ~~v~~~~~~~~~~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~-  175 (327)
                      .....++++|||++|+... . +..|.+.|+.+++.+..+..+..      ..-...+ +...++.+.||......+.+ 
T Consensus       105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~------~~vy~t~-e~~~~~~~~Dg~~~~v~~d~~  177 (352)
T TIGR02658       105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDC------YHIFPTA-NDTFFMHCRDGSLAKVGYGTK  177 (352)
T ss_pred             CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCC------cEEEEec-CCccEEEeecCceEEEEecCC
Confidence            1134789999999999776 3 68999999999998887776543      2222222 22233333344433322221 


Q ss_pred             Cce-eeE---ecC------CCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCc-----eeEEeee-------cccceEE
Q psy7482         176 AGV-LQT---LKS------ESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGS-----HLWQIKA-------SASRIKG  231 (327)
Q Consensus       176 ~~~-~~~---~~~------~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~-----~~~~~~~-------~~~~v~~  231 (327)
                      ++. ...   +..      ..+    .+.+ + .++++..+ |.|.+.|+...+     ....+..       ..+....
T Consensus       178 g~~~~~~~~vf~~~~~~v~~rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~  252 (352)
T TIGR02658       178 GNPKIKPTEVFHPEDEYLINHP----AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQ  252 (352)
T ss_pred             CceEEeeeeeecCCccccccCC----ceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCccee
Confidence            111 111   111      122    3455 5 55555555 999999964432     2222211       1223344


Q ss_pred             EEEEecCCCcEEEEec----------CCCeEEEEEcCCCceeEEeecccCceEEEeeeC--c-EEEEEe-cCCcEEEEEc
Q psy7482         232 LVFFSIPQETTVCTGN----------EESAITAYNLTDGSHLWHIKASASRIKGLASHR--N-HLICIT-SAGDLVVWEL  297 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~-~dg~v~iw~~  297 (327)
                      ++++  ++++.+++..          ..+.|.++|..+++.+..+..- ..+..++++|  + +|++.. .++.|.+.|.
T Consensus       253 ia~~--~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG-~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~  329 (352)
T TIGR02658       253 VAYH--RARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELG-HEIDSINVSQDAKPLLYALSTGDKTLYIFDA  329 (352)
T ss_pred             EEEc--CCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCC-CceeeEEECCCCCeEEEEeCCCCCcEEEEEC
Confidence            8885  7888877742          2257999999999999888753 4889999999  5 666665 5788999999


Q ss_pred             cCc
Q psy7482         298 NED  300 (327)
Q Consensus       298 ~~~  300 (327)
                      .+.
T Consensus       330 ~t~  332 (352)
T TIGR02658       330 ETG  332 (352)
T ss_pred             cCC
Confidence            888

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG4547|consensus

Probab=99.63  E-value=2.1e-13  Score=111.63  Aligned_cols=187  Identities=13%  Similarity=0.177  Sum_probs=150.4

Q ss_pred             cCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE------cc--------------CCcEEEeec-CC
Q psy7482         108 PSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW------SP--------------EGLLYAIPI-QN  166 (327)
Q Consensus       108 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~--------------~~~~l~~~~-~~  166 (327)
                      |...++|....||.+++||...++....+......  .+...+..|      +|              +...++.|. .|
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~--s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g   80 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASL--SGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQG   80 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccchhc--cCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCc
Confidence            34578999999999999999888765554332221  111333333      22              234566676 89


Q ss_pred             eEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcE
Q psy7482         167 KAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT  242 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~  242 (327)
                      .|.+|++..++....+.   |.+.+.++.++.+ +.+.+++.|+.+..|+....+.+..++.....+.++++.  ||+..
T Consensus        81 ~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is--~D~~~  158 (541)
T KOG4547|consen   81 SVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCIS--PDGKI  158 (541)
T ss_pred             cEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEc--CCCCE
Confidence            99999999999888876   8899999999888 999999999999999999999999999888889999994  89999


Q ss_pred             EEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--------cEEEEEecCCcEEEEEccCc
Q psy7482         243 VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--------NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       243 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--------~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +++++  +.|++||+++++.+..|.+|.++|++++|..        .+|.+...+.-+.+|-+...
T Consensus       159 l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~  222 (541)
T KOG4547|consen  159 LLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKE  222 (541)
T ss_pred             EEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEcc
Confidence            99987  6899999999999999999999999999865        34555555667889988774

>KOG0974|consensus

Probab=99.62  E-value=6.2e-14  Score=121.64  Aligned_cols=271  Identities=12%  Similarity=0.129  Sum_probs=186.9

Q ss_pred             CCccEEEEEeCCCEEEEecCCCeEEEEEcccccccccccc-ccccEEEEEECC------CCCeEEEecCCCcEEEEEcCC
Q psy7482          13 HTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTP------EGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus        13 h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~~------~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      |-+++++..+-.++|..|. .-.+.+||+..+..+..+.. +..++.    .+      .+.+++++..-+.+..=+...
T Consensus         6 ~~~~l~~~~~~~~~llag~-gp~i~~yd~~s~~li~~~~~~~~~~~H----~~e~~~~l~~~~~v~~~~~~~v~~~~~~~   80 (967)
T KOG0974|consen    6 SLGPLNLPQLVSDYLLAGS-GPEILVYDLSSGCLIRHLIQSKILEVH----RGEGKVKLLSGKIVTCAKSDEVYVKEASN   80 (967)
T ss_pred             ccccccchhhccceeeecC-CCceEEeeCCchhHhhhhhhhcccccc----cccccceeccceEEEEEeecceeecchhh
Confidence            4566667777337776655 45699999998876655442 111111    11      133455554443333322211


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-  164 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  164 (327)
                       +..    ..-.+. |....+..+.+.++.++.+..+.+||...+........... ..-....-+-++++.-++++|+ 
T Consensus        81 -~~~----~~~s~w-i~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er-~~l~~~~~~g~s~~~~~i~~gsv  153 (967)
T KOG0974|consen   81 -QII----ERFSDW-IFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDER-CTLYSSLIIGDSAEELYIASGSV  153 (967)
T ss_pred             -hhh----hhcccc-ccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCce-EEEEeEEEEeccCcEEEEEeccc
Confidence             111    112222 44445555677888888899999999887665443322222 1111123334566667888887 


Q ss_pred             CCeEEEEEecCCc-eeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeE-EeeecccceEEEEEEecCCCc
Q psy7482         165 QNKAVVFSVEKAG-VLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLW-QIKASASRIKGLVFFSIPQET  241 (327)
Q Consensus       165 ~~~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~s~~~~  241 (327)
                      -+.|.+|+....+ +.....|.+.|.++.++.| .++++.++|.++++|++.+.+... ..-+|+..+..+.|+  |+  
T Consensus       154 ~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~--~n--  229 (967)
T KOG0974|consen  154 FGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFL--PN--  229 (967)
T ss_pred             cccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEec--cc--
Confidence            8999999987333 3334459999999999998 899999999999999999988766 567899999999996  45  


Q ss_pred             EEEEecCCCeEEEEEcCCCceeEEeeccc-CceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         242 TVCTGNEESAITAYNLTDGSHLWHIKASA-SRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+++++.|.+.++|+. +++.+..+..|. ..|+.++..+  ..++|++.||.+++|++...
T Consensus       230 ~i~t~gedctcrvW~~-~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r  290 (967)
T KOG0974|consen  230 RIITVGEDCTCRVWGV-NGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR  290 (967)
T ss_pred             eeEEeccceEEEEEec-ccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence            9999999999999975 455566888886 5789999988  88999999999999998775

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.62  E-value=7.7e-11  Score=97.07  Aligned_cols=255  Identities=11%  Similarity=0.211  Sum_probs=161.3

Q ss_pred             EEEEe--CCCEEEEecC----CCeEEEEEcccc--c--cccccccccccEEEEEECCCCCeEEEecC-CCcEEEEEcCC-
Q psy7482          18 RSVAA--TSKLAASSGA----DETVVLYDMVKR--K--QSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGS-   85 (327)
Q Consensus        18 ~~~~~--~~~~l~~~~~----dg~v~~w~~~~~--~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~-   85 (327)
                      ..+++  ++++|.+...    +|.|..|++...  +  .+............++++|++++|+++.. +|.|.++++.. 
T Consensus        40 s~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~  119 (345)
T PF10282_consen   40 SWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDD  119 (345)
T ss_dssp             CCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             ceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCC
Confidence            34455  7888887765    578999988764  2  33333323445667999999999988864 89999999976 


Q ss_pred             CeEEEeEE-ec----------ccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCCc--eee--eeeccccCccccceE
Q psy7482          86 WQLEKLFK-KA----------HKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKGR--SAY--ITNLSSYGVGFENLD  149 (327)
Q Consensus        86 ~~~~~~~~-~~----------~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~--~~~--~~~~~~~~~~~~~v~  149 (327)
                      +....... ..          .......++.++|+++++++... ...|.+|++....  ...  ....+.    ....+
T Consensus       120 g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~----G~GPR  195 (345)
T PF10282_consen  120 GSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPP----GSGPR  195 (345)
T ss_dssp             SEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECST----TSSEE
T ss_pred             cccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeecccccc----CCCCc
Confidence            44433321 11          12223788999999998888653 3579999997655  222  112222    12388


Q ss_pred             EEEEccCCcEEEeec--CCeEEEEEec--CCc--eeeEec-------CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcC
Q psy7482         150 SVVWSPEGLLYAIPI--QNKAVVFSVE--KAG--VLQTLK-------SESKVHSVCFLNE-TTV-CTGNEESAITAYNLT  214 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~--~~~i~i~d~~--~~~--~~~~~~-------~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~  214 (327)
                      .+.|+|+++++.+..  ++.|.++++.  +++  .+..+.       .......+.++|| ++| ++....+.|.+|++.
T Consensus       196 h~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d  275 (345)
T PF10282_consen  196 HLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLD  275 (345)
T ss_dssp             EEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEEC
T ss_pred             EEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEe
Confidence            999999998876664  8999999998  332  222222       1225788999999 444 445577889999993


Q ss_pred             C--Cce--eEEeeecccceEEEEEEecCCCcEEEEec-CCCeEEEEEcC--CCceeEEee-cccCceEEEee
Q psy7482         215 D--GSH--LWQIKASASRIKGLVFFSIPQETTVCTGN-EESAITAYNLT--DGSHLWHIK-ASASRIKGLAS  278 (327)
Q Consensus       215 ~--~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~~--~~~~~~~~~-~~~~~v~~~~~  278 (327)
                      .  ++.  +..+.......+.+++  +|+|++|+++. .++.|.+|++.  +|.+...-. ..-....|+.|
T Consensus       276 ~~~g~l~~~~~~~~~G~~Pr~~~~--s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f  345 (345)
T PF10282_consen  276 PATGTLTLVQTVPTGGKFPRHFAF--SPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF  345 (345)
T ss_dssp             TTTTTEEEEEEEEESSSSEEEEEE---TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred             cCCCceEEEEEEeCCCCCccEEEE--eCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence            2  332  3334433444788888  49999998876 45789999764  555433322 12234555554

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2315|consensus

Probab=99.60  E-value=2e-12  Score=105.41  Aligned_cols=271  Identities=15%  Similarity=0.207  Sum_probs=175.0

Q ss_pred             cEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEe-----cC-----CCcEEEEEc
Q psy7482          16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-----SD-----DGSIAIFRV   83 (327)
Q Consensus        16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-----~~-----d~~i~iw~~   83 (327)
                      +++..++  +|+++|.+. +..++|++..++..+.+....  .+.++.|+|.+++|.+-     ..     .-.+.+|++
T Consensus        36 ~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~--~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~v  112 (566)
T KOG2315|consen   36 PCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVELK--KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNV  112 (566)
T ss_pred             cceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEeccc--eeeeeeecccccccccccccccccCCCCCCCceeeeee
Confidence            3444455  677776655 778999999888644443322  78999999999988752     11     235789999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC---------------------
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG---------------------  142 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---------------------  142 (327)
                      +++.....+......  -++..|+.|..+.+ --..+.+++|++.+.+..... +....                     
T Consensus       113 et~~~~s~~q~k~Q~--~W~~qfs~dEsl~a-rlv~nev~f~~~~~f~~~~~k-l~~~~i~~f~lSpgp~~~~vAvyvPe  188 (566)
T KOG2315|consen  113 ETGVQRSQIQKKMQN--GWVPQFSIDESLAA-RLVSNEVQFYDLGSFKTIQHK-LSVSGITMLSLSPGPEPPFVAVYVPE  188 (566)
T ss_pred             ccceehhheehhhhc--Ccccccccchhhhh-hhhcceEEEEecCCccceeee-eeccceeeEEecCCCCCceEEEEccC
Confidence            996666666333333  25778888765332 223456777776553211100 00000                     


Q ss_pred             -----------------cc---------ccceEEEEEccCCc-EEE-eec--C---------CeEEEEEecCCceeeEec
Q psy7482         143 -----------------VG---------FENLDSVVWSPEGL-LYA-IPI--Q---------NKAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       143 -----------------~~---------~~~v~~~~~~~~~~-~l~-~~~--~---------~~i~i~d~~~~~~~~~~~  183 (327)
                                       .+         ...-..+.|++-|. +|+ +.+  |         .++++++++.....-.+.
T Consensus       189 ~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~  268 (566)
T KOG2315|consen  189 KKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL  268 (566)
T ss_pred             CCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecC
Confidence                             00         00012344555443 121 111  2         256666666445555566


Q ss_pred             CCCceeEEEeecCc-e--EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecC---CCeEEEEEc
Q psy7482         184 SESKVHSVCFLNET-T--VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNE---ESAITAYNL  257 (327)
Q Consensus       184 ~~~~i~~~~~~~~~-~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~---d~~i~i~d~  257 (327)
                      ..++|.++.|+|++ .  ++-|-+--.+.+||++ +.++..+  .+++-+++-|  +|.|++++.++-   .|.+.+||+
T Consensus       269 k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~f--np~g~ii~lAGFGNL~G~mEvwDv  343 (566)
T KOG2315|consen  269 KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFF--NPHGNIILLAGFGNLPGDMEVWDV  343 (566)
T ss_pred             CCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEE--CCCCCEEEEeecCCCCCceEEEec
Confidence            78999999999983 3  4457788899999986 5566554  4566677777  499999988765   488999999


Q ss_pred             CCCceeEEeecccCceEEEeeeC--cEEEEEec------CCcEEEEEccCc
Q psy7482         258 TDGSHLWHIKASASRIKGLASHR--NHLICITS------AGDLVVWELNED  300 (327)
Q Consensus       258 ~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~------dg~v~iw~~~~~  300 (327)
                      .+.+++..+.....  +-+.|+|  ++++|++.      |+.++||++...
T Consensus       344 ~n~K~i~~~~a~~t--t~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~  392 (566)
T KOG2315|consen  344 PNRKLIAKFKAANT--TVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGS  392 (566)
T ss_pred             cchhhccccccCCc--eEEEEcCCCcEEEEEeccccEEecCCeEEEEecCc
Confidence            99989888876643  4578999  88888874      688999999776

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.59  E-value=2e-12  Score=110.00  Aligned_cols=210  Identities=10%  Similarity=0.131  Sum_probs=136.7

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---CCEEEEEcCCCceeeeeeccccCccccceEEEE
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                      ..|.++|....+. ..+ ..+... +....|+|+|++|+.+..+   ..|++||+.+++..........      ..+++
T Consensus       170 ~~l~~~d~~g~~~-~~l-~~~~~~-~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~------~~~~~  240 (417)
T TIGR02800       170 YELQVADYDGANP-QTI-TRSREP-ILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGM------NGAPA  240 (417)
T ss_pred             ceEEEEcCCCCCC-EEe-ecCCCc-eecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCC------ccceE
Confidence            3588888764443 334 344444 8889999999999887654   4799999988865443333222      56789


Q ss_pred             EccCCcEEEee-c-C--CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC-CCC--cEEEEEcCCCceeEEeee
Q psy7482         153 WSPEGLLYAIP-I-Q--NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN-EES--AITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       153 ~~~~~~~l~~~-~-~--~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~d~--~i~i~d~~~~~~~~~~~~  224 (327)
                      |+|+++.|+.. . +  ..|++||+.+++......+........|+|+ ..++..+ .++  .|+++|+.+++. ..+..
T Consensus       241 ~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~l~~  319 (417)
T TIGR02800       241 FSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RRLTF  319 (417)
T ss_pred             ECCCCCEEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEeec
Confidence            99999877654 3 3  3688999887765444344444557789998 5565443 333  578888876654 34444


Q ss_pred             cccceEEEEEEecCCCcEEEEecCCC---eEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCc---EEEEE
Q psy7482         225 SASRIKGLVFFSIPQETTVCTGNEES---AITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGD---LVVWE  296 (327)
Q Consensus       225 ~~~~v~~~~~~~s~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~---v~iw~  296 (327)
                      +........|  +|+|++++.++.++   .|.+||+.++... .+... .......|+|  +.|+..+.++.   +++.+
T Consensus       320 ~~~~~~~~~~--spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~  395 (417)
T TIGR02800       320 RGGYNASPSW--SPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVS  395 (417)
T ss_pred             CCCCccCeEE--CCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEE
Confidence            4455667778  48999998887765   7999998876532 22222 2234567888  66666665542   45555


Q ss_pred             ccC
Q psy7482         297 LNE  299 (327)
Q Consensus       297 ~~~  299 (327)
                      ...
T Consensus       396 ~~g  398 (417)
T TIGR02800       396 TDG  398 (417)
T ss_pred             CCC
Confidence            443

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG4190|consensus

Probab=99.58  E-value=1.2e-14  Score=118.47  Aligned_cols=243  Identities=13%  Similarity=0.169  Sum_probs=179.4

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC-------CeEEEeEEecccCCceeeEEEecCCCEEEEEeCC
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD  119 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  119 (327)
                      +..+.+|+..|..++--.+.+.+++++.|++|++|.++.       ..+..++ +.|..+ |.++.|-.+-++++++  |
T Consensus       728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY-~aHkk~-i~~igfL~~lr~i~Sc--D  803 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTY-QAHKKP-IHDIGFLADLRSIASC--D  803 (1034)
T ss_pred             eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEh-hhccCc-ccceeeeeccceeeec--c
Confidence            345678999999988777888899999999999999853       2345556 778777 9999999988887754  7


Q ss_pred             CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c-CCeEEEEEecCCceeeEec------CCCceeEE
Q psy7482         120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-QNKAVVFSVEKAGVLQTLK------SESKVHSV  191 (327)
Q Consensus       120 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~d~~~~~~~~~~~------~~~~i~~~  191 (327)
                      |.|++||.--++.+..+...........|.++.- -+..++.++ + ..+++++|.+..+....++      .+..+.++
T Consensus       804 ~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~n-v~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~i  882 (1034)
T KOG4190|consen  804 GGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLEN-VDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAI  882 (1034)
T ss_pred             CcceeecccccchhHhhhcCcccCCCceeEeccc-CcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEE
Confidence            8899999887777654433322111122333321 133444444 5 8999999999988776665      23568899


Q ss_pred             EeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEE-EEcCCCceeEEeecc
Q psy7482         192 CFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITA-YNLTDGSHLWHIKAS  269 (327)
Q Consensus       192 ~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i-~d~~~~~~~~~~~~~  269 (327)
                      +..+. +.++++-.+|.|.+.|.++|+.+..++.-+.....++-   |..+.|+....|..+.+ |...++....+.+..
T Consensus       883 aVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaa---psdq~L~~saldHslaVnWhaldgimh~q~kpp  959 (1034)
T KOG4190|consen  883 AVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAA---PSDQALAQSALDHSLAVNWHALDGIMHLQDKPP  959 (1034)
T ss_pred             EeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcC---chhHHHHhhcccceeEeeehhcCCeeeeccCCC
Confidence            99887 88999999999999999999999888877777777775   88899999999999999 988777766666554


Q ss_pred             cCceEEEeeeCcEEEEEecCCcEEEEEc
Q psy7482         270 ASRIKGLASHRNHLICITSAGDLVVWEL  297 (327)
Q Consensus       270 ~~~v~~~~~~~~~l~~~~~dg~v~iw~~  297 (327)
                      ..+..-+.--...++++.....+.+|.-
T Consensus       960 pepahflqsvgpSLV~a~~Gn~lgVYad  987 (1034)
T KOG4190|consen  960 PEPAHFLQSVGPSLVTAQNGNILGVYAD  987 (1034)
T ss_pred             CcchhhhhccCceeEEeccCcEEEEEec
Confidence            4443333222267778877777888853

>KOG0974|consensus

Probab=99.58  E-value=1.2e-12  Score=113.86  Aligned_cols=117  Identities=21%  Similarity=0.390  Sum_probs=104.9

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      .+.||.+.|.++.+  ||.++++.|.|.++|+|++++.+... ..-+|+..|..+.|.|+  .+++++.|-+.++|+.+.
T Consensus       170 ~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~  247 (967)
T KOG0974|consen  170 RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNG  247 (967)
T ss_pred             eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEeccc
Confidence            46799999999999  99999999999999999999998776 66689999999999988  899999999999997764


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  129 (327)
                       .....+ ..|....|..++..++...+++++.|+.+++||+..
T Consensus       248 -~~l~~y-~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  248 -TQLEVY-DEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             -ceehhh-hhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence             444577 778777799999999999999999999999999865

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.57  E-value=4.1e-12  Score=107.97  Aligned_cols=230  Identities=12%  Similarity=0.139  Sum_probs=139.3

Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-C--CEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-K--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW  153 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  153 (327)
                      .|.++|....+. +.+ ...... +....|+|||+.|+..+.+ +  .|.+||+.+++..........      .....|
T Consensus       199 ~l~i~d~dG~~~-~~l-~~~~~~-~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~------~~~~~w  269 (448)
T PRK04792        199 QLMIADYDGYNE-QML-LRSPEP-LMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGI------NGAPRF  269 (448)
T ss_pred             EEEEEeCCCCCc-eEe-ecCCCc-ccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCC------cCCeeE
Confidence            577778765443 333 344444 8889999999988876543 3  588899988765443323222      446899


Q ss_pred             ccCCcEEEee-c-CC--eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEE-eCCCC--cEEEEEcCCCceeEEeeec
Q psy7482         154 SPEGLLYAIP-I-QN--KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCT-GNEES--AITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       154 ~~~~~~l~~~-~-~~--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~-~~~d~--~i~i~d~~~~~~~~~~~~~  225 (327)
                      +|||+.++.. . ++  .|+++|+.+++......+.......+|+|| ..++. ...++  .|+++|+.+++... +...
T Consensus       270 SPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~  348 (448)
T PRK04792        270 SPDGKKLALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFE  348 (448)
T ss_pred             CCCCCEEEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecC
Confidence            9999987764 3 44  588889887765443335556678899999 55544 33334  46667777665432 2222


Q ss_pred             ccceEEEEEEecCCCcEEEEecCC-C--eEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEE-EecCCc--EEEEEc
Q psy7482         226 ASRIKGLVFFSIPQETTVCTGNEE-S--AITAYNLTDGSHLWHIKASASRIKGLASHR--NHLIC-ITSAGD--LVVWEL  297 (327)
Q Consensus       226 ~~~v~~~~~~~s~~~~~l~~~~~d-~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~-~~~dg~--v~iw~~  297 (327)
                      .......+|  +|+|++|+..+.+ +  .|.++|+.+++.. .+.... ......|+|  +.|+. ...+|.  +.+++.
T Consensus       349 g~~~~~~~~--SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~~-~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~  424 (448)
T PRK04792        349 GEQNLGGSI--TPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTSTR-LDESPSVAPNGTMVIYSTTYQGKQVLAAVSI  424 (448)
T ss_pred             CCCCcCeeE--CCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCCC-CCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence            222334567  4999988776543 3  4666788777643 222221 222446888  55444 444554  666676


Q ss_pred             cCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         298 NEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +..   ....+.  ...+.+...+|+|-
T Consensus       425 ~G~---~~~~l~--~~~g~~~~p~Wsp~  447 (448)
T PRK04792        425 DGR---FKARLP--AGQGEVKSPAWSPF  447 (448)
T ss_pred             CCC---ceEECc--CCCCCcCCCccCCC
Confidence            443   333332  23456778899884

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.57  E-value=7e-12  Score=106.82  Aligned_cols=230  Identities=15%  Similarity=0.134  Sum_probs=142.3

Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---CCEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW  153 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  153 (327)
                      .|.++|.+.++. ..+ ..+... +....|+|||+.|+..+.+   ..|.+||+.+++..........      .....|
T Consensus       180 ~l~~~d~~g~~~-~~l-~~~~~~-~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~------~~~~~~  250 (430)
T PRK00178        180 TLQRSDYDGARA-VTL-LQSREP-ILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGL------NGAPAW  250 (430)
T ss_pred             EEEEECCCCCCc-eEE-ecCCCc-eeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCC------cCCeEE
Confidence            477778775544 334 344444 8999999999998876643   3689999988876443322222      556899


Q ss_pred             ccCCcEEEeec--CC--eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC-CCC--cEEEEEcCCCceeEEeeec
Q psy7482         154 SPEGLLYAIPI--QN--KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN-EES--AITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       154 ~~~~~~l~~~~--~~--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~d~--~i~i~d~~~~~~~~~~~~~  225 (327)
                      +|+|+.++...  ++  .|+++|+.+++......+........|+|| +.++..+ .++  .|+++|+.+++... +...
T Consensus       251 SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~  329 (430)
T PRK00178        251 SPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAER-VTFV  329 (430)
T ss_pred             CCCCCEEEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-eecC
Confidence            99999877543  33  688899988765543335555667889998 5554443 333  57777887776432 2211


Q ss_pred             ccceEEEEEEecCCCcEEEEecCC-C--eEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEec-CCc--EEEEEc
Q psy7482         226 ASRIKGLVFFSIPQETTVCTGNEE-S--AITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITS-AGD--LVVWEL  297 (327)
Q Consensus       226 ~~~v~~~~~~~s~~~~~l~~~~~d-~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-dg~--v~iw~~  297 (327)
                      ........|  +|+|+.++..+.+ +  .|.++|+.+++... +.. ........|+|  +.++..+. +|.  |.++++
T Consensus       330 ~~~~~~~~~--Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~-~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~  405 (430)
T PRK00178        330 GNYNARPRL--SADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTD-TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSI  405 (430)
T ss_pred             CCCccceEE--CCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccC-CCCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence            222334566  4899998876543 3  58899998876432 221 11223457888  55555443 344  666666


Q ss_pred             cCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         298 NEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +..   ..+.+.  ...+.+...+|+|-
T Consensus       406 ~g~---~~~~l~--~~~g~~~~p~ws~~  428 (430)
T PRK00178        406 NGR---VRLPLP--TAQGEVREPSWSPY  428 (430)
T ss_pred             CCC---ceEECc--CCCCCcCCCccCCC
Confidence            544   233333  23445777888884

>KOG0280|consensus

Probab=99.55  E-value=2.7e-12  Score=96.54  Aligned_cols=224  Identities=15%  Similarity=0.224  Sum_probs=152.2

Q ss_pred             CCcEEEEEcCCCeEEE--eEEecccCCceeeEEEec---CCC-EEEEEeCCCCEEEEEcCCCceeeeee-ccccCccccc
Q psy7482          75 DGSIAIFRVGSWQLEK--LFKKAHKGTAVNHISIHP---SGK-LALSVGKDKTLRTWNLVKGRSAYITN-LSSYGVGFEN  147 (327)
Q Consensus        75 d~~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~~~---~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~  147 (327)
                      .|.+.+|++...+...  ++....... +..+.|.-   ++. .++-+...|.|.++..........+. +.........
T Consensus        45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~-~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~  123 (339)
T KOG0280|consen   45 SGKLHLYSLEDMKLSPLDTLQCTDTST-EFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVE  123 (339)
T ss_pred             ccceEEEeecccccCccceeeeecccc-cceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhhee
Confidence            4677888876655433  232233333 67777764   444 45666778999999865443332222 1111111112


Q ss_pred             eEEEEEccCCcEEEeec-CCeEEEEEecCCceee--Eec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcC-CCceeE
Q psy7482         148 LDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQ--TLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLT-DGSHLW  220 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~--~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~-~~~~~~  220 (327)
                      ..++.|++.+..++++. +|.+.+.+........  .++ |+.+.....|+..  +.+.+|+.|+.+..||++ .++.+.
T Consensus       124 ~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~  203 (339)
T KOG0280|consen  124 ALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIW  203 (339)
T ss_pred             eeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceee
Confidence            45788999888888875 8888866555444333  555 7888888888764  789999999999999999 444444


Q ss_pred             E-eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC-CceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEE
Q psy7482         221 Q-IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD-GSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVW  295 (327)
Q Consensus       221 ~-~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw  295 (327)
                      . .+.|...|.+|.-++ |.+.++++|+.|-.|++||.++ ++++..-. -.+.|+.+.++|   ..+..+..-+-.+|-
T Consensus       204 ~n~kvH~~GV~SI~ss~-~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~  281 (339)
T KOG0280|consen  204 HNSKVHTSGVVSIYSSP-PKPTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKHHPEIFHRLLAACMHNGAKIL  281 (339)
T ss_pred             ecceeeecceEEEecCC-CCCceEEEeccccceeeeehhcccCccccCc-cccceEEEEecchhhhHHHHHHHhcCceEE
Confidence            4 567888999999886 8899999999999999999984 55555443 337899999999   344445555556677


Q ss_pred             EccCcc
Q psy7482         296 ELNEDV  301 (327)
Q Consensus       296 ~~~~~~  301 (327)
                      +.+.+.
T Consensus       282 ~~~~~~  287 (339)
T KOG0280|consen  282 DSSDKV  287 (339)
T ss_pred             Eecccc
Confidence            766653

>KOG1064|consensus

Probab=99.54  E-value=5.9e-14  Score=128.01  Aligned_cols=218  Identities=14%  Similarity=0.198  Sum_probs=163.1

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      +-..|.++.-+|...+.++|+.||.+++|....++.+..+....... |+.+.|+.+|+.+..+..||.+.+|... .+.
T Consensus      2207 ~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~-vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~ 2284 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSR-VTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKP 2284 (2439)
T ss_pred             ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcch-hhhhhhcccCCceeeeccCCceeecccC-Ccc
Confidence            45668888888988899999999999999999999888886666654 9999999999999999999999999986 222


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec----CCeEEEEEecCCceeeE--ecCCCceeEEEeecC-ceEEEeCCC
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVEKAGVLQT--LKSESKVHSVCFLNE-TTVCTGNEE  205 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~-~~l~~~~~d  205 (327)
                      .  +   ....|......+.|-.  ..+++++    ++.+.+||.........  .-|.+..+++++.|. ..+++|+.+
T Consensus      2285 ~--~---s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2285 Y--T---SWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred             e--e---ccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCc
Confidence            1  1   2222233356666654  4555542    67899999754332222  338999999999998 899999999


Q ss_pred             CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec---ccCc--e--EEEee
Q psy7482         206 SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA---SASR--I--KGLAS  278 (327)
Q Consensus       206 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~--v--~~~~~  278 (327)
                      |.|++||++..+..+.++.         +   ....++.+|+..|.++||++.....+.++..   |.+-  .  ..+..
T Consensus      2358 G~v~l~D~rqrql~h~~~~---------~---~~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v 2425 (2439)
T KOG1064|consen 2358 GEVCLFDIRQRQLRHTFQA---------L---DTREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHAKQGFFRNIGMQINV 2425 (2439)
T ss_pred             CcEEEeehHHHHHHHHhhh---------h---hhhheeeccCcccceEEEEccccchhhcCchhhcccchhhhcCceeee
Confidence            9999999998888777664         2   3577899999999999999998877766652   1111  1  12223


Q ss_pred             eC-cEEEEEecCCc
Q psy7482         279 HR-NHLICITSAGD  291 (327)
Q Consensus       279 ~~-~~l~~~~~dg~  291 (327)
                      .+ +.|.+++.||+
T Consensus      2426 ~~~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2426 GQCNRIFSCGADGT 2439 (2439)
T ss_pred             ccCceEEEecCCCC
Confidence            33 77777877764

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.54  E-value=2.2e-11  Score=102.44  Aligned_cols=266  Identities=11%  Similarity=0.108  Sum_probs=170.5

Q ss_pred             eCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCc-
Q psy7482          22 ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA-  100 (327)
Q Consensus        22 ~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-  100 (327)
                      .++..++.++.+|.+..+|.++|+.+...............  .+..++.+..++.+.-+|.++|+.+........... 
T Consensus       118 v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~  195 (394)
T PRK11138        118 VAGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTL  195 (394)
T ss_pred             EECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccc
Confidence            35566777888999999999999988776643221111112  245677788899999999999998877632211000 


Q ss_pred             --eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc--cceEEEEEcc---CCcEEEeecCCeEEEEEe
Q psy7482         101 --VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF--ENLDSVVWSP---EGLLYAIPIQNKAVVFSV  173 (327)
Q Consensus       101 --v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~---~~~~l~~~~~~~i~i~d~  173 (327)
                        ......  .+..++.++.+|.+..+|..+|+..............  .....+.-+|   ++.+++.+.++.+..+|.
T Consensus       196 ~~~~sP~v--~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~  273 (394)
T PRK11138        196 RGESAPAT--AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDL  273 (394)
T ss_pred             cCCCCCEE--ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEEC
Confidence              011111  1335777788899999999999877665432211000  0011111222   455555556999999999


Q ss_pred             cCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeeccc-ceEEEEEEecCCCcEEEEecCCCeE
Q psy7482         174 EKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASAS-RIKGLVFFSIPQETTVCTGNEESAI  252 (327)
Q Consensus       174 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~s~~~~~l~~~~~d~~i  252 (327)
                      .+++.+........ ..+.. .++.++.++.+|.+..+|..+++.+.....-.. ...+...    .+.+++.++.||.+
T Consensus       274 ~tG~~~W~~~~~~~-~~~~~-~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v----~~g~l~v~~~~G~l  347 (394)
T PRK11138        274 RSGQIVWKREYGSV-NDFAV-DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL----YNGYLVVGDSEGYL  347 (394)
T ss_pred             CCCCEEEeecCCCc-cCcEE-ECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE----ECCEEEEEeCCCEE
Confidence            99988776653221 12222 246788888999999999999988765432111 1222222    35677788899999


Q ss_pred             EEEEcCCCceeEEeecccCceE-EEeeeCcEEEEEecCCcEEEEEc
Q psy7482         253 TAYNLTDGSHLWHIKASASRIK-GLASHRNHLICITSAGDLVVWEL  297 (327)
Q Consensus       253 ~i~d~~~~~~~~~~~~~~~~v~-~~~~~~~~l~~~~~dg~v~iw~~  297 (327)
                      .+.|..+|+.+...+.....+. ...+....|+.++.||.|+.++.
T Consensus       348 ~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        348 HWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQARDGTVYAITR  393 (394)
T ss_pred             EEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEeCCceEEEEeC
Confidence            9999999999888765433332 22233378899999999988765

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.53  E-value=3e-10  Score=91.56  Aligned_cols=236  Identities=10%  Similarity=0.111  Sum_probs=154.7

Q ss_pred             EEeCCCEEEEecC----------CCeEEEEEcccccccccccccc-------ccEEEEEECCCCCeEEEec-C-CCcEEE
Q psy7482          20 VAATSKLAASSGA----------DETVVLYDMVKRKQSGALMQHE-------GTITCLKFTPEGSHLISCS-D-DGSIAI   80 (327)
Q Consensus        20 ~~~~~~~l~~~~~----------dg~v~~w~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~-~-d~~i~i   80 (327)
                      ++.|++.|+.+..          +..|.+||..+++.+..+.-..       .....++++|||++|++.. . +..|.+
T Consensus        53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V  132 (352)
T TIGR02658        53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV  132 (352)
T ss_pred             ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence            5568887776654          7889999999999888776322       2234788999999998776 3 689999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc-----CccccceEEEEEcc
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY-----GVGFENLDSVVWSP  155 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~  155 (327)
                      .|+.+++.+..+..+.  . ..-...+++. .+ +-+.||......+.+..........-.     .....+    .|.+
T Consensus       133 vD~~~~kvv~ei~vp~--~-~~vy~t~e~~-~~-~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP----~~~~  203 (352)
T TIGR02658       133 VDLEGKAFVRMMDVPD--C-YHIFPTANDT-FF-MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHP----AYSN  203 (352)
T ss_pred             EECCCCcEEEEEeCCC--C-cEEEEecCCc-cE-EEeecCceEEEEecCCCceEEeeeeeecCCccccccCC----ceEc
Confidence            9999999998883322  1 2222222222 22 233455555544433211111111100     000111    3455


Q ss_pred             -CCcEEEeecCCeEEEEEecCC-----ceeeEec--------CCCceeEEEeecC-ceEEEeC----------CCCcEEE
Q psy7482         156 -EGLLYAIPIQNKAVVFSVEKA-----GVLQTLK--------SESKVHSVCFLNE-TTVCTGN----------EESAITA  210 (327)
Q Consensus       156 -~~~~l~~~~~~~i~i~d~~~~-----~~~~~~~--------~~~~i~~~~~~~~-~~l~~~~----------~d~~i~i  210 (327)
                       +++++.++.+|.|.+.|+...     +....+.        ..+...-++++++ +++++..          ..+.|.+
T Consensus       204 ~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~V  283 (352)
T TIGR02658       204 KSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFV  283 (352)
T ss_pred             CCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEE
Confidence             888888888899999996443     3333322        1233445999998 6666532          2357999


Q ss_pred             EEcCCCceeEEeeecccceEEEEEEecCCCc-EEEEec-CCCeEEEEEcCCCceeEEee
Q psy7482         211 YNLTDGSHLWQIKASASRIKGLVFFSIPQET-TVCTGN-EESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       211 ~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~~~~-~d~~i~i~d~~~~~~~~~~~  267 (327)
                      +|..+++.+..+... ..+..+++  +||++ +|++.+ .++.|.++|..+++.+.++.
T Consensus       284 iD~~t~kvi~~i~vG-~~~~~iav--S~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~  339 (352)
T TIGR02658       284 VDAKTGKRLRKIELG-HEIDSINV--SQDAKPLLYALSTGDKTLYIFDAETGKELSSVN  339 (352)
T ss_pred             EECCCCeEEEEEeCC-CceeeEEE--CCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence            999999999888753 46889999  59999 777666 57889999999999988873

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1912|consensus

Probab=99.53  E-value=1.6e-11  Score=104.16  Aligned_cols=305  Identities=13%  Similarity=0.163  Sum_probs=197.2

Q ss_pred             eEEEeeeeccCCccEEEEEe--------CC------CEEEEecCCCeEEEEEccccccccccccccccEEEEEECC---C
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--------TS------KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP---E   65 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--------~~------~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~---~   65 (327)
                      ++.+.+.  -|+..|+.+.|        .+      -+||++...|.|.+||...+..+..+..|..++..++|-+   +
T Consensus        46 q~iqsie--~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~  123 (1062)
T KOG1912|consen   46 QLIQSIE--LHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDD  123 (1062)
T ss_pred             hhhhccc--cCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCc
Confidence            4455555  58899999999        11      2578888899999999999999999999999999999987   3


Q ss_pred             C-CeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEE-----------------
Q psy7482          66 G-SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWN-----------------  126 (327)
Q Consensus        66 ~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd-----------------  126 (327)
                      . ..|+.-.....+.+|+..+|+..... ...... ..|+.+.| |.+.+..-+..|.+.+-+                 
T Consensus       124 Srd~LlaIh~ss~lvLwntdtG~k~Wk~-~ys~~i-Ls~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~  201 (1062)
T KOG1912|consen  124 SRDVLLAIHGSSTLVLWNTDTGEKFWKY-DYSHEI-LSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQIT  201 (1062)
T ss_pred             chheeEEecCCcEEEEEEccCCceeecc-ccCCcc-eeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEe
Confidence            3 45666666779999999999887776 222322 55566666 444444444444444333                 


Q ss_pred             ---------------------------------------------------------cCCCceeeeeeccccCccccceE
Q psy7482         127 ---------------------------------------------------------LVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus       127 ---------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                                                                               ++-..++....++..     .+.
T Consensus       202 sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~-----~ak  276 (1062)
T KOG1912|consen  202 SDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERG-----GAK  276 (1062)
T ss_pred             cCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccC-----Ccc
Confidence                                                                     222222222222211     133


Q ss_pred             EEEEccCC--cEEEeec-CCeEEEEEecC----------------CceeeEe----------------------------
Q psy7482         150 SVVWSPEG--LLYAIPI-QNKAVVFSVEK----------------AGVLQTL----------------------------  182 (327)
Q Consensus       150 ~~~~~~~~--~~l~~~~-~~~i~i~d~~~----------------~~~~~~~----------------------------  182 (327)
                      -+.+-|++  ..+.+.. +|.+.+|-.+.                ++....+                            
T Consensus       277 fv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g  356 (1062)
T KOG1912|consen  277 FVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSG  356 (1062)
T ss_pred             eeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcc
Confidence            45555554  3444443 88888876543                1000000                            


Q ss_pred             --------------------------------------------c----CCCceeEEEee-----------cC-------
Q psy7482         183 --------------------------------------------K----SESKVHSVCFL-----------NE-------  196 (327)
Q Consensus       183 --------------------------------------------~----~~~~i~~~~~~-----------~~-------  196 (327)
                                                                  .    |....++....           |.       
T Consensus       357 ~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~  436 (1062)
T KOG1912|consen  357 DSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGT  436 (1062)
T ss_pred             hhHHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCcccee
Confidence                                                        0    11111111111           11       


Q ss_pred             -ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEE---------ecCCCeEEEEEcCCCcee--E
Q psy7482         197 -TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCT---------GNEESAITAYNLTDGSHL--W  264 (327)
Q Consensus       197 -~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~---------~~~d~~i~i~d~~~~~~~--~  264 (327)
                       .+++.|...|+|.++|+.++.....+..|...|.++.|.  ...+++-.         ++.-+.+.+-|+++|...  +
T Consensus       437 ~pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~--g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR  514 (1062)
T KOG1912|consen  437 VPLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWL--GNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFR  514 (1062)
T ss_pred             eeeEEeecCCceEEEEEecchhhhhhhcccccceeeeeec--cceeEEEeeeccccccccceeeeEEEEEcccccccccc
Confidence             267889999999999999999989999999999999994  33333321         222346888899988633  2


Q ss_pred             Eee-cccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCc-eEEEEeC
Q psy7482         265 HIK-ASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCR-FTCLAIR  323 (327)
Q Consensus       265 ~~~-~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~-i~~l~~~  323 (327)
                      .++ ....+|+.+..+.  ++++..-.|.-+.+||+.+.     ..+......-+ |+.++|+
T Consensus       515 ~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~-----~~lr~mS~a~P~it~leWs  572 (1062)
T KOG1912|consen  515 GLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTL-----RMLRLMSLALPLITVLEWS  572 (1062)
T ss_pred             cCCCCCcCcceeeeecccCceEEEEecccchHHHhhccc-----hHHHHHhhcCCcEEEEeec
Confidence            223 3356899988877  99999999999999999776     33333444445 8899998

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.53  E-value=3.2e-11  Score=101.76  Aligned_cols=234  Identities=12%  Similarity=0.111  Sum_probs=140.9

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeE---EEecCC--CcEEEEEcCCCeEEEeEEecccCCceeeEEEec
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL---ISCSDD--GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP  108 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~  108 (327)
                      ..|.+.|...+.. +.+.........-+|+|||+.+   ++...+  ..|.+.++.+++.....  ...+. .....|+|
T Consensus       165 ~~l~~~d~dG~~~-~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt--~~~g~-~~~p~wSP  240 (428)
T PRK01029        165 GELWSVDYDGQNL-RPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKIL--ALQGN-QLMPTFSP  240 (428)
T ss_pred             ceEEEEcCCCCCc-eEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEee--cCCCC-ccceEECC
Confidence            3677777754443 3444455667788999999752   244434  35777788877654432  23333 55689999


Q ss_pred             CCCEEEEEeC-CC----CEEEEEcCCC---ceeeeeeccccCccccceEEEEEccCCcEEEeec--CCe--EEEEEecC-
Q psy7482         109 SGKLALSVGK-DK----TLRTWNLVKG---RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNK--AVVFSVEK-  175 (327)
Q Consensus       109 ~~~~l~~~~~-dg----~i~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~--i~i~d~~~-  175 (327)
                      ||+.|+..+. +|    .+..|++..+   +........ .    ......+|+|||+.|+..+  +|.  ++++++.. 
T Consensus       241 DG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~-~----~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~  315 (428)
T PRK01029        241 RKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEA-F----GTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE  315 (428)
T ss_pred             CCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCC-C----CCcCCeEECCCCCEEEEEECCCCCceEEEEECccc
Confidence            9988887653 23    3444676653   222222111 1    1145679999999777664  454  44445432 


Q ss_pred             CceeeEec-CCCceeEEEeecC-ceEEEeCC-C--CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecC--
Q psy7482         176 AGVLQTLK-SESKVHSVCFLNE-TTVCTGNE-E--SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNE--  248 (327)
Q Consensus       176 ~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~-d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~--  248 (327)
                      +.....+. ....+....|+|| +.++..+. +  ..|.+||+.+++... +......+....|  +|+|+.|+....  
T Consensus       316 g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~w--SpDG~~L~f~~~~~  392 (428)
T PRK01029        316 GQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSW--AIDSLHLVYSAGNS  392 (428)
T ss_pred             ccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEE--CCCCCEEEEEECCC
Confidence            23334443 3456778899999 55654433 2  468999998886543 3323345667788  489988774332  


Q ss_pred             -CCeEEEEEcCCCceeEEeecccCceEEEeeeC
Q psy7482         249 -ESAITAYNLTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       249 -d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                       ...|+++|+..++..... ...+.+...+|+|
T Consensus       393 g~~~L~~vdl~~g~~~~Lt-~~~g~~~~p~Ws~  424 (428)
T PRK01029        393 NESELYLISLITKKTRKIV-IGSGEKRFPSWGA  424 (428)
T ss_pred             CCceEEEEECCCCCEEEee-cCCCcccCceecC
Confidence             356889998877644333 2344556667776

>KOG0280|consensus

Probab=99.51  E-value=6.3e-12  Score=94.61  Aligned_cols=238  Identities=16%  Similarity=0.090  Sum_probs=163.6

Q ss_pred             ccEEEEEe-----CCC-EEEEecCCCeEEEEEccccccccccccc------cccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482          15 ASVRSVAA-----TSK-LAASSGADETVVLYDMVKRKQSGALMQH------EGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus        15 ~~v~~~~~-----~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      +.+..|.|     ++. .++-+..+|.|.++.....+....+.+-      .....++.|++.+..++++-.+|.+.+-+
T Consensus        70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~  149 (339)
T KOG0280|consen   70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVY  149 (339)
T ss_pred             cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEe
Confidence            34566666     555 5666778899999986654433333321      11345788999999999999999999666


Q ss_pred             cCCCeEEE--eEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCc
Q psy7482          83 VGSWQLEK--LFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGL  158 (327)
Q Consensus        83 ~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~  158 (327)
                      ........  .. +.|.-. ++...|+. +.+++++|+.|+.+..||++..+   .+.......|...|.++.-+| ...
T Consensus       150 ~t~~~le~vq~w-k~He~E-~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~---~~i~~n~kvH~~GV~SI~ss~~~~~  224 (339)
T KOG0280|consen  150 ETEMVLEKVQTW-KVHEFE-AWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK---TFIWHNSKVHTSGVVSIYSSPPKPT  224 (339)
T ss_pred             cceeeeeecccc-ccccee-eeeeecccCCCceEEecCCCceEEEEEecCCc---ceeeecceeeecceEEEecCCCCCc
Confidence            55554443  55 677766 88888876 56789999999999999998433   222333344455689998887 467


Q ss_pred             EEEeec-CCeEEEEEec-CCceeeEecCCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCce-----eEEeeecccce
Q psy7482         159 LYAIPI-QNKAVVFSVE-KAGVLQTLKSESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSH-----LWQIKASASRI  229 (327)
Q Consensus       159 ~l~~~~-~~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~-----~~~~~~~~~~v  229 (327)
                      ++++|+ |..|++||.+ -++++..-+..+.|..+.++|.  ..++.++.-+-.++-+...+..     ....+.|.+-.
T Consensus       225 ~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~  304 (339)
T KOG0280|consen  225 YIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLC  304 (339)
T ss_pred             eEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeeecccccccee
Confidence            899998 9999999999 5677777777799999999997  5666777777778888765432     23345566555


Q ss_pred             EEEEEEecCCCcEEEEec-CCCeEE-EEEcCC
Q psy7482         230 KGLVFFSIPQETTVCTGN-EESAIT-AYNLTD  259 (327)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~-~d~~i~-i~d~~~  259 (327)
                      +.-.|.  .....|++++ .|+.++ +|-.-+
T Consensus       305 YG~DWd--~~~~~lATCsFYDk~~~~~Wl~~t  334 (339)
T KOG0280|consen  305 YGGDWD--SKDSFLATCSFYDKKIRQLWLHIT  334 (339)
T ss_pred             eccccc--cccceeeeeeccccceeeeeeecc
Confidence            555552  2345677754 455544 664433

>KOG4547|consensus

Probab=99.51  E-value=3.1e-11  Score=99.20  Aligned_cols=186  Identities=20%  Similarity=0.210  Sum_probs=146.0

Q ss_pred             CCEEEEecCCCeEEEEEcccccccccccc---ccccEEEEEEC------C--------------CCCeEEEecCCCcEEE
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQSGALMQ---HEGTITCLKFT------P--------------EGSHLISCSDDGSIAI   80 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~---~~~~v~~~~~~------~--------------~~~~l~~~~~d~~i~i   80 (327)
                      ..++|....||.+++||..+++..+.+..   -++..++..|.      |              +...++-|...|.|.+
T Consensus         5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~   84 (541)
T KOG4547|consen    5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLL   84 (541)
T ss_pred             hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEE
Confidence            46899999999999999998887666542   23444555542      1              2336788889999999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY  160 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  160 (327)
                      |++..++....+..+.+..+|.++.++.+-..|.+++.|+.+..|+....+...........     +.+++.+||+..+
T Consensus        85 ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~-----~~sl~is~D~~~l  159 (541)
T KOG4547|consen   85 YSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPL-----VSSLCISPDGKIL  159 (541)
T ss_pred             EEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCc-----cceEEEcCCCCEE
Confidence            99999999998864444444999999999899999999999999999988877766555442     8899999999988


Q ss_pred             EeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC------ceEE-EeCCCCcEEEEEcCC
Q psy7482         161 AIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE------TTVC-TGNEESAITAYNLTD  215 (327)
Q Consensus       161 ~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~------~~l~-~~~~d~~i~i~d~~~  215 (327)
                      +++ .+.|.+||+++++.+..|. |.++|.+++|..+      .+++ +...+..+.+|-+..
T Consensus       160 ~~a-s~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  160 LTA-SRQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             Eec-cceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            877 4889999999999999999 8899999999654      2333 344555677776543

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.49  E-value=6e-11  Score=100.12  Aligned_cols=234  Identities=13%  Similarity=0.069  Sum_probs=142.4

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCE--E-EEEeCCC--CEEEEEcCCCceeeeeeccccCccccceEE
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKL--A-LSVGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDS  150 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l-~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~  150 (327)
                      +.|.+.|...++... + ...... ...-.|+|||+.  + ++...+|  .|.+.++..++..........      ...
T Consensus       165 ~~l~~~d~dG~~~~~-l-t~~~~~-~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~------~~~  235 (428)
T PRK01029        165 GELWSVDYDGQNLRP-L-TQEHSL-SITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGN------QLM  235 (428)
T ss_pred             ceEEEEcCCCCCceE-c-ccCCCC-cccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCC------ccc
Confidence            467777876555433 3 233333 677899999875  2 2343443  578888888876555544443      456


Q ss_pred             EEEccCCcEEEeec--CC--e--EEEEEecCC---ceeeEecCC-CceeEEEeecC-ceEEEe-CCCCcEEEE--EcCC-
Q psy7482         151 VVWSPEGLLYAIPI--QN--K--AVVFSVEKA---GVLQTLKSE-SKVHSVCFLNE-TTVCTG-NEESAITAY--NLTD-  215 (327)
Q Consensus       151 ~~~~~~~~~l~~~~--~~--~--i~i~d~~~~---~~~~~~~~~-~~i~~~~~~~~-~~l~~~-~~d~~i~i~--d~~~-  215 (327)
                      ..|+|||+.|+...  +|  .  +..|++..+   +........ ......+|+|| ..|+.. ..+|...+|  ++.. 
T Consensus       236 p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~  315 (428)
T PRK01029        236 PTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE  315 (428)
T ss_pred             eEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccc
Confidence            89999998887754  22  3  344676643   333333222 34467899999 555544 456655555  4432 


Q ss_pred             CceeEEeeecccceEEEEEEecCCCcEEEEecCC---CeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEE-EEecC
Q psy7482         216 GSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE---SAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLI-CITSA  289 (327)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~-~~~~d  289 (327)
                      +.....+..+...+....|  +|+|+.|+..+.+   ..|.+||+.+++.... ......+....|+|  +.|+ ++..+
T Consensus       316 g~~~~~lt~~~~~~~~p~w--SPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~L-t~~~~~~~~p~wSpDG~~L~f~~~~~  392 (428)
T PRK01029        316 GQSPRLLTKKYRNSSCPAW--SPDGKKIAFCSVIKGVRQICVYDLATGRDYQL-TTSPENKESPSWAIDSLHLVYSAGNS  392 (428)
T ss_pred             ccceEEeccCCCCccceeE--CCCCCEEEEEEcCCCCcEEEEEECCCCCeEEc-cCCCCCccceEECCCCCEEEEEECCC
Confidence            2334444444455677788  5999988865443   4699999988875433 32334567788998  5555 44333


Q ss_pred             --CcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         290 --GDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       290 --g~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                        ..|.++++..+   ....+..  ..+.+...+|+|..
T Consensus       393 g~~~L~~vdl~~g---~~~~Lt~--~~g~~~~p~Ws~~~  426 (428)
T PRK01029        393 NESELYLISLITK---KTRKIVI--GSGEKRFPSWGAFP  426 (428)
T ss_pred             CCceEEEEECCCC---CEEEeec--CCCcccCceecCCC
Confidence              45888888776   3444432  33456778898854

>KOG2314|consensus

Probab=99.48  E-value=6.2e-11  Score=96.87  Aligned_cols=279  Identities=13%  Similarity=0.190  Sum_probs=184.6

Q ss_pred             EEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEE
Q psy7482          36 VVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALS  115 (327)
Q Consensus        36 v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  115 (327)
                      ...|+.....+...-...+-.=+-+.|||.|.||++-..-| |.+|--.+...++.+  .|.+  |.-+.|||..+||++
T Consensus       192 svfwN~~~n~p~~ie~RenWTetyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF--~Hp~--Vq~idfSP~EkYLVT  266 (698)
T KOG2314|consen  192 SVFWNSKFNEPSLIEERENWTETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRF--YHPG--VQFIDFSPNEKYLVT  266 (698)
T ss_pred             EEEccccCCchhhhhhhhcceeeeEEecCCceEEEEEeccc-eeeecCccHHHHHhc--cCCC--ceeeecCCccceEEE
Confidence            55677554433322222233456789999999999988776 899987777666666  3443  899999999999998


Q ss_pred             EeC-----------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-
Q psy7482         116 VGK-----------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-  183 (327)
Q Consensus       116 ~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-  183 (327)
                      -+.           ...+.|||+.+|.....+.......  ..-.-+.||.|++++|.-..++|.||+..+..++..-. 
T Consensus       267 ~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~--~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Ksl  344 (698)
T KOG2314|consen  267 YSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPY--LKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSL  344 (698)
T ss_pred             ecCCccccCcccCCCceEEEEEccccchhcceeccCCCc--cccceEEeccCCceeEEeccceEEEEecCceeeeccccc
Confidence            653           2579999999999887776642221  11345689999999999888999999987755443333 


Q ss_pred             CCCceeEEEeecC-ceEEEeC-----CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEe----------c
Q psy7482         184 SESKVHSVCFLNE-TTVCTGN-----EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG----------N  247 (327)
Q Consensus       184 ~~~~i~~~~~~~~-~~l~~~~-----~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~----------~  247 (327)
                      .-..|....|+|. +.|+-=.     .-..+.+..+.+++.+++-.-+.-.=..+-|  ..+|.+|+.-          +
T Consensus       345 ki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhW--Qk~gdyLcvkvdR~tK~~~~g  422 (698)
T KOG2314|consen  345 KISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHW--QKSGDYLCVKVDRHTKSKVKG  422 (698)
T ss_pred             CCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEe--ccCCcEEEEEEEeeccccccc
Confidence            4567899999998 5555322     2235677777777777766555433333444  4778888752          2


Q ss_pred             CCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEE-ec--CCcEEEEEccCccCCCceeeeecCCCCceEEEEe
Q psy7482         248 EESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICI-TS--AGDLVVWELNEDVTREPQRVSATNDGCRFTCLAI  322 (327)
Q Consensus       248 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~-~~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~  322 (327)
                      .-..+.|+.++........-.-...|...+|.|  +.+++- +.  ..++.+|.++... ..+..+..... ..-+.+.|
T Consensus       423 ~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~-~~~~lVk~~dk-~~~N~vfw  500 (698)
T KOG2314|consen  423 QFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNI-KKPSLVKELDK-KFANTVFW  500 (698)
T ss_pred             eEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCC-Cchhhhhhhcc-cccceEEE
Confidence            223467777776653333333456889999999  444433 33  3569999998532 24444444333 45678888


Q ss_pred             CCC
Q psy7482         323 RPP  325 (327)
Q Consensus       323 ~p~  325 (327)
                      +|.
T Consensus       501 sPk  503 (698)
T KOG2314|consen  501 SPK  503 (698)
T ss_pred             cCC
Confidence            885

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.48  E-value=1.5e-10  Score=90.64  Aligned_cols=220  Identities=18%  Similarity=0.205  Sum_probs=142.8

Q ss_pred             CCeEEEEEccccccccccccc--cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          33 DETVVLYDMVKRKQSGALMQH--EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        33 dg~v~~w~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      +|+|..||..+|+.+....--  .....+. ..+++..+++++.++.+..||..+|+.+..+..  ... +.... ...+
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~--~~~-~~~~~-~~~~   76 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL--PGP-ISGAP-VVDG   76 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEEC--SSC-GGSGE-EEET
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec--ccc-cccee-eecc
Confidence            689999999999888776531  1122211 223466788888999999999999999888733  222 22222 2235


Q ss_pred             CEEEEEeCCCCEEEEEcCCCceeeee-eccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCC-c
Q psy7482         111 KLALSVGKDKTLRTWNLVKGRSAYIT-NLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSES-K  187 (327)
Q Consensus       111 ~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~-~  187 (327)
                      ..++.+..++.+..+|..+|+..... .........  .........+..++++. ++.+..+|.++|+.+....... .
T Consensus        77 ~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~  154 (238)
T PF13360_consen   77 GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGV--RSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPR  154 (238)
T ss_dssp             TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCST--B--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-
T ss_pred             cccccccceeeeEecccCCcceeeeecccccccccc--ccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCC
Confidence            56777778889999999999998874 332111111  11222222365666665 9999999999999988876321 1


Q ss_pred             ----------e-eEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482         188 ----------V-HSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       188 ----------i-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                                + ..+.+. ++.++.+..++.+..+|+.+++.+.+..  ......+..   ..+..|+.++.++.+..||
T Consensus       155 ~~~~~~~~~~~~~~~~~~-~~~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~~~~~~~---~~~~~l~~~~~~~~l~~~d  228 (238)
T PF13360_consen  155 GSSPISSFSDINGSPVIS-DGRVYVSSGDGRVVAVDLATGEKLWSKP--ISGIYSLPS---VDGGTLYVTSSDGRLYALD  228 (238)
T ss_dssp             SS--EEEETTEEEEEECC-TTEEEEECCTSSEEEEETTTTEEEEEEC--SS-ECECEE---CCCTEEEEEETTTEEEEEE
T ss_pred             CCcceeeecccccceEEE-CCEEEEEcCCCeEEEEECCCCCEEEEec--CCCccCCce---eeCCEEEEEeCCCEEEEEE
Confidence                      1 222222 3577777777764444999998765333  222333222   6778888777999999999


Q ss_pred             cCCCceeEE
Q psy7482         257 LTDGSHLWH  265 (327)
Q Consensus       257 ~~~~~~~~~  265 (327)
                      +++++.+++
T Consensus       229 ~~tG~~~W~  237 (238)
T PF13360_consen  229 LKTGKVVWQ  237 (238)
T ss_dssp             TTTTEEEEE
T ss_pred             CCCCCEEeE
Confidence            999998764

...

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.44  E-value=2.2e-10  Score=96.36  Aligned_cols=267  Identities=12%  Similarity=0.084  Sum_probs=170.9

Q ss_pred             eCCCEEEEecCCCeEEEEEccccccccccccccc--cEE-----EEEECC--CCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          22 ATSKLAASSGADETVVLYDMVKRKQSGALMQHEG--TIT-----CLKFTP--EGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        22 ~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~--~v~-----~~~~~~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      +.+..+++++.+|.+.-+|..+|+.+........  ...     .+.-.|  ++..++.++.+|.+..+|.++|+.....
T Consensus        67 v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~  146 (394)
T PRK11138         67 VAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQT  146 (394)
T ss_pred             EECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence            3566777788899999999999988765542210  000     000011  3556778888999999999999988776


Q ss_pred             EecccCCceee-EEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEE
Q psy7482          93 KKAHKGTAVNH-ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVF  171 (327)
Q Consensus        93 ~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~  171 (327)
                      .. .. . +.+ ...  .+..++.+..+|.+..+|.++|+.+................+.... ++..++...++.+..+
T Consensus       147 ~~-~~-~-~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~-~~~v~~~~~~g~v~a~  220 (394)
T PRK11138        147 KV-AG-E-ALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATA-FGGAIVGGDNGRVSAV  220 (394)
T ss_pred             cC-CC-c-eecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEE-CCEEEEEcCCCEEEEE
Confidence            22 21 1 221 122  2446777888899999999999988777654221000000011111 3445555558999999


Q ss_pred             EecCCceeeEecCCCc--------eeEEEeec---CceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482         172 SVEKAGVLQTLKSESK--------VHSVCFLN---ETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       172 d~~~~~~~~~~~~~~~--------i~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      |..+++.+.......+        ...+..+|   ++.+++++.+|.+..+|..+++.+.+....  ....+.    ..+
T Consensus       221 d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~--~~~~~~----~~~  294 (394)
T PRK11138        221 LMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYG--SVNDFA----VDG  294 (394)
T ss_pred             EccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCC--CccCcE----EEC
Confidence            9999987766542111        11111223   467777888999999999999887765421  112222    246


Q ss_pred             cEEEEecCCCeEEEEEcCCCceeEEeeccc-CceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         241 TTVCTGNEESAITAYNLTDGSHLWHIKASA-SRIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ..++.++.+|.+..+|..+++.++...... ....+.......|+.++.||.|...|..++
T Consensus       295 ~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v~~g~l~v~~~~G~l~~ld~~tG  355 (394)
T PRK11138        295 GRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVLYNGYLVVGDSEGYLHWINREDG  355 (394)
T ss_pred             CEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEEECCEEEEEeCCCEEEEEECCCC
Confidence            677778889999999999998877654221 122223334488889999999999998887

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.43  E-value=3.6e-10  Score=88.54  Aligned_cols=211  Identities=16%  Similarity=0.220  Sum_probs=141.2

Q ss_pred             CCCcEEEEEcCCCeEEEeEEecc-cCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEE
Q psy7482          74 DDGSIAIFRVGSWQLEKLFKKAH-KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        74 ~d~~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                      .+|.|..||..+|+.+....... ... ..+. ..+++..+++++.++.|..||..+|+.+...........   .   .
T Consensus         1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~-~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~---~---~   72 (238)
T PF13360_consen    1 DDGTLSALDPRTGKELWSYDLGPGIGG-PVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISG---A---P   72 (238)
T ss_dssp             -TSEEEEEETTTTEEEEEEECSSSCSS-EEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGS---G---E
T ss_pred             CCCEEEEEECCCCCEEEEEECCCCCCC-ccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccccccc---e---e
Confidence            36899999999999988873322 122 2211 233566788888999999999999999888877443111   1   2


Q ss_pred             EccCCcEEEeecCCeEEEEEecCCceeeEe-cCC----C--ceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeec
Q psy7482         153 WSPEGLLYAIPIQNKAVVFSVEKAGVLQTL-KSE----S--KVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       153 ~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~-~~~----~--~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  225 (327)
                      ...++.+++...++.++.+|..+++.+... ...    .  ......+. ++.++++..++.+..+|.++|+.+......
T Consensus        73 ~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~  151 (238)
T PF13360_consen   73 VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVD-GDRLYVGTSSGKLVALDPKTGKLLWKYPVG  151 (238)
T ss_dssp             EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEE-TTEEEEEETCSEEEEEETTTTEEEEEEESS
T ss_pred             eecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEe-cCEEEEEeccCcEEEEecCCCcEEEEeecC
Confidence            333455555556889999999999998884 321    1  11222222 467788888999999999999998888664


Q ss_pred             ccce-----------EEEEEEecCCCcEEEEecCCCe-EEEEEcCCCceeEEeecccCceEE-EeeeCcEEEEEecCCcE
Q psy7482         226 ASRI-----------KGLVFFSIPQETTVCTGNEESA-ITAYNLTDGSHLWHIKASASRIKG-LASHRNHLICITSAGDL  292 (327)
Q Consensus       226 ~~~v-----------~~~~~~~s~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v  292 (327)
                      ....           ..+.+   .++ .+..++.++. +.+ |+.+++.++... .. .+.. .......|+.++.++.|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~---~~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~-~~-~~~~~~~~~~~~l~~~~~~~~l  224 (238)
T PF13360_consen  152 EPRGSSPISSFSDINGSPVI---SDG-RVYVSSGDGRVVAV-DLATGEKLWSKP-IS-GIYSLPSVDGGTLYVTSSDGRL  224 (238)
T ss_dssp             TT-SS--EEEETTEEEEEEC---CTT-EEEEECCTSSEEEE-ETTTTEEEEEEC-SS--ECECEECCCTEEEEEETTTEE
T ss_pred             CCCCCcceeeecccccceEE---ECC-EEEEEcCCCeEEEE-ECCCCCEEEEec-CC-CccCCceeeCCEEEEEeCCCEE
Confidence            4221           12222   344 6666777775 555 999999776444 22 3333 33444888888899999


Q ss_pred             EEEEccCc
Q psy7482         293 VVWELNED  300 (327)
Q Consensus       293 ~iw~~~~~  300 (327)
                      ..||+.++
T Consensus       225 ~~~d~~tG  232 (238)
T PF13360_consen  225 YALDLKTG  232 (238)
T ss_dssp             EEEETTTT
T ss_pred             EEEECCCC
Confidence            99999998

...

>KOG1912|consensus

Probab=99.42  E-value=3.9e-11  Score=101.83  Aligned_cols=280  Identities=14%  Similarity=0.147  Sum_probs=191.4

Q ss_pred             CCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCC------------CeEEEecCCCcEE
Q psy7482          13 HTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG------------SHLISCSDDGSIA   79 (327)
Q Consensus        13 h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~------------~~l~~~~~d~~i~   79 (327)
                      |...-.++.| .+.++|-|+ ...|.+-|..+.+.++.+..|...|+.+.|.|..            -.||++...|.|.
T Consensus        14 ~~sN~~A~Dw~~~GLiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi   92 (1062)
T KOG1912|consen   14 SRSNRNAADWSPSGLIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII   92 (1062)
T ss_pred             CcccccccccCccceEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE
Confidence            3344567778 777888777 5579999999999999999999999999998731            2577888899999


Q ss_pred             EEEcCCCeEEEeEEecccCCceeeEEEec---CC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482          80 IFRVGSWQLEKLFKKAHKGTAVNHISIHP---SG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      +||...+..+..+ ..+.++ +..++|-+   +. ..|++-....++.+|+..+|+..+.......     ...|+.+.|
T Consensus        93 l~d~~~~s~~~~l-~~~~~~-~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~-----iLs~f~~DP  165 (1062)
T KOG1912|consen   93 LVDFVLASVINWL-SHSNDS-VQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHE-----ILSCFRVDP  165 (1062)
T ss_pred             EEEehhhhhhhhh-cCCCcc-hhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCc-----ceeeeeeCC
Confidence            9999988777777 555555 99999987   33 4566666678999999999998877665544     266688888


Q ss_pred             -CCcEE-EeecCCeEEEEEecC-------CceeeEec-CCC------------c-------------eeEEEeecC-ceE
Q psy7482         156 -EGLLY-AIPIQNKAVVFSVEK-------AGVLQTLK-SES------------K-------------VHSVCFLNE-TTV  199 (327)
Q Consensus       156 -~~~~l-~~~~~~~i~i~d~~~-------~~~~~~~~-~~~------------~-------------i~~~~~~~~-~~l  199 (327)
                       |.+.+ +.++.|.+.+-+.-.       ++..+.-. |..            .             ...++|+|. ..+
T Consensus       166 fd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~  245 (1062)
T KOG1912|consen  166 FDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNI  245 (1062)
T ss_pred             CCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhce
Confidence             33444 445577777665422       11111110 111            0             113566787 444


Q ss_pred             EEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc----------------ee
Q psy7482         200 CTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS----------------HL  263 (327)
Q Consensus       200 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----------------~~  263 (327)
                      +.......+.++|++-..++.......+.+.-+.+.|.|....|++.-.||.+.+|--+...                ..
T Consensus       246 lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~  325 (1062)
T KOG1912|consen  246 LFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQV  325 (1062)
T ss_pred             EEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccce
Confidence            44456678999999988888888777777778888877778889999999999999755421                11


Q ss_pred             EEeeccc-CceEEEeeeC---cEEEEEecCCcEEEEEccCc
Q psy7482         264 WHIKASA-SRIKGLASHR---NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       264 ~~~~~~~-~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ..+...+ -.+......|   ..++.--.+|.+.+|.+..+
T Consensus       326 ~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~  366 (1062)
T KOG1912|consen  326 HVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNG  366 (1062)
T ss_pred             EEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcC
Confidence            1111111 0111112222   45555556888999999865

>KOG1064|consensus

Probab=99.42  E-value=2e-12  Score=118.44  Aligned_cols=212  Identities=11%  Similarity=0.201  Sum_probs=160.1

Q ss_pred             CeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcccc
Q psy7482          67 SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFE  146 (327)
Q Consensus        67 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  146 (327)
                      +.+....-++...-|..+.+....   ..+-.. |.++.=+|...+.++|+.||.+++|....++.+........    .
T Consensus      2181 ~~~~~~n~~~~~~tq~~~~~~~~~---k~~v~~-v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~----s 2252 (2439)
T KOG1064|consen 2181 NRFTPSNLPWLGSTQTSRGASVMI---KHPVEN-VRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGN----S 2252 (2439)
T ss_pred             ccCCcccCCccccceecccceeEe---ecccCc-eeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCc----c
Confidence            334444445555555544332221   233344 88888899888999999999999999988887776655443    4


Q ss_pred             ceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEe---CCCCcEEEEEcCCCc---e
Q psy7482         147 NLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTG---NEESAITAYNLTDGS---H  218 (327)
Q Consensus       147 ~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~---~  218 (327)
                      .++.+.|+.+|+.+..+. ||.+.+|... .++....+ |+.....+.|-. ..++++   +.++.+.+||..-..   .
T Consensus      2253 ~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~-s~~~tag~s~d~~n~~lwDtl~~~~~s~ 2330 (2439)
T KOG1064|consen 2253 RVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG-SLLATAGRSSDNRNVCLWDTLLPPMNSL 2330 (2439)
T ss_pred             hhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee-hhhhccccCCCCCcccchhcccCcccce
Confidence            499999999999888886 9999999987 45555555 777778887766 444443   367889999964322   2


Q ss_pred             eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEcc
Q psy7482         219 LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELN  298 (327)
Q Consensus       219 ~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~  298 (327)
                      +.  ..|.+.++++++.  |..+.|++|+.+|.|++||++..+++++++.       +. ...++++|+..|.++||++.
T Consensus      2331 v~--~~H~~gaT~l~~~--P~~qllisggr~G~v~l~D~rqrql~h~~~~-------~~-~~~~f~~~ss~g~ikIw~~s 2398 (2439)
T KOG1064|consen 2331 VH--TCHDGGATVLAYA--PKHQLLISGGRKGEVCLFDIRQRQLRHTFQA-------LD-TREYFVTGSSEGNIKIWRLS 2398 (2439)
T ss_pred             ee--eecCCCceEEEEc--CcceEEEecCCcCcEEEeehHHHHHHHHhhh-------hh-hhheeeccCcccceEEEEcc
Confidence            33  7899999999996  8999999999999999999999888877765       22 23899999999999999998


Q ss_pred             Cc
Q psy7482         299 ED  300 (327)
Q Consensus       299 ~~  300 (327)
                      ..
T Consensus      2399 ~~ 2400 (2439)
T KOG1064|consen 2399 EF 2400 (2439)
T ss_pred             cc
Confidence            76

>KOG2314|consensus

Probab=99.42  E-value=4.9e-10  Score=91.75  Aligned_cols=265  Identities=10%  Similarity=0.160  Sum_probs=172.3

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC-----------CCcEEEEEcCCCeEEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-----------DGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------d~~i~iw~~~~~~~~~~   91 (327)
                      .|.||+|-...| |.+|--++...++.+. |.+ |.-+.|||+.+||++-+.           ...++|||+.+|...+.
T Consensus       221 ~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrs  297 (698)
T KOG2314|consen  221 KGTYLVTFHKQG-IALWGGESFDRIQRFY-HPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRS  297 (698)
T ss_pred             CceEEEEEeccc-eeeecCccHHHHHhcc-CCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcc
Confidence            788999988777 8899877666666665 554 889999999999998653           25799999999999888


Q ss_pred             EEecccCCce-eeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---C--
Q psy7482          92 FKKAHKGTAV-NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---Q--  165 (327)
Q Consensus        92 ~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~--  165 (327)
                      +........+ .-..||.|++++|--.. ..|.||+..+-..+....+.     ...|....|+|.+++||.=.   +  
T Consensus       298 F~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslk-----i~gIr~FswsP~~~llAYwtpe~~~~  371 (698)
T KOG2314|consen  298 FPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLK-----ISGIRDFSWSPTSNLLAYWTPETNNI  371 (698)
T ss_pred             eeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccC-----CccccCcccCCCcceEEEEcccccCC
Confidence            8432222212 33579999999998776 56999987664433322222     23489999999999888753   2  


Q ss_pred             -CeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEE----------eCCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482         166 -NKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCT----------GNEESAITAYNLTDGSHLWQIKASASRIKGL  232 (327)
Q Consensus       166 -~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~----------~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  232 (327)
                       ..+.+..+.+++.+++-. ++-.=..+-|-.+ .+|+.          .+.-..+.|+.++.....-..-.-...|...
T Consensus       372 parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~F  451 (698)
T KOG2314|consen  372 PARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAF  451 (698)
T ss_pred             cceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeee
Confidence             356777777777666554 2211122333333 33332          2222345666666544322222234567777


Q ss_pred             EEEecCCCcEEEEecC---CCeEEEEEcCC-C---ceeEEeecccCceEEEeeeC--cEEEEEe---cCCcEEEEEccCc
Q psy7482         233 VFFSIPQETTVCTGNE---ESAITAYNLTD-G---SHLWHIKASASRIKGLASHR--NHLICIT---SAGDLVVWELNED  300 (327)
Q Consensus       233 ~~~~s~~~~~l~~~~~---d~~i~i~d~~~-~---~~~~~~~~~~~~v~~~~~~~--~~l~~~~---~dg~v~iw~~~~~  300 (327)
                      +|-  |.|..+++-+.   ..++.+|.+++ .   .++..+..  ...+.+.|+|  ++++.+.   ..|.+.++|..-.
T Consensus       452 aWE--P~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a  527 (698)
T KOG2314|consen  452 AWE--PHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYA  527 (698)
T ss_pred             eec--cCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEEEcCCCcEEEEEEecccccceEEEecchh
Confidence            884  88887765432   35688898773 2   23444443  3567899999  6666554   4688999999853

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.42  E-value=2.2e-09  Score=98.08  Aligned_cols=287  Identities=12%  Similarity=0.162  Sum_probs=179.3

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEE----EccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLY----DMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      ..+.|.++.+  +...++.+..+|.|.+.    +..+.. +...-.-...|.+++||||++.|+..+.++++.+..-. .
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~-f  151 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRD-F  151 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEecc-c
Confidence            3467888888  78888888889999999    443332 11222245689999999999999999999988886421 1


Q ss_pred             eEEE------------------------eE------------Ee-----------cccCCceeeEEEecCCCEEEEEeC-
Q psy7482          87 QLEK------------------------LF------------KK-----------AHKGTAVNHISIHPSGKLALSVGK-  118 (327)
Q Consensus        87 ~~~~------------------------~~------------~~-----------~~~~~~v~~~~~~~~~~~l~~~~~-  118 (327)
                      +++.                        .|            ..           ..... -..++|..||.++++.+. 
T Consensus       152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~-~~~ISWRGDG~yFAVss~~  230 (928)
T PF04762_consen  152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDG-RVRISWRGDGEYFAVSSVE  230 (928)
T ss_pred             eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCC-ceEEEECCCCcEEEEEEEE
Confidence            1110                        00            00           01112 456889999999998774 


Q ss_pred             --C---CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec----CCeEEEEEecCCceeeEec-----C
Q psy7482         119 --D---KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVEKAGVLQTLK-----S  184 (327)
Q Consensus       119 --d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~~~~~~~~~~-----~  184 (327)
                        .   ..+++|+-+ |+...... +..    +--.+++|.|.|+++|+..    ...|.+|. ++|-.-..|.     .
T Consensus       231 ~~~~~~R~iRVy~Re-G~L~stSE-~v~----gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~  303 (928)
T PF04762_consen  231 PETGSRRVIRVYSRE-GELQSTSE-PVD----GLEGALSWRPSGNLIASSQRLPDRHDVVFFE-RNGLRHGEFTLRFDPE  303 (928)
T ss_pred             cCCCceeEEEEECCC-ceEEeccc-cCC----CccCCccCCCCCCEEEEEEEcCCCcEEEEEe-cCCcEeeeEecCCCCC
Confidence              2   579999954 65433222 111    1145789999999999985    24566665 3444444443     3


Q ss_pred             CCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce--eEEeeec-ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482         185 ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH--LWQIKAS-ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       185 ~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~-~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                      ...+..+.|++| ..|+....| .|.+|-..+-.-  .+.+... ...+..+.|++ .+...|...+.+|.+..++..  
T Consensus       304 ~~~v~~l~Wn~ds~iLAv~~~~-~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdp-e~p~~L~v~t~~g~~~~~~~~--  379 (928)
T PF04762_consen  304 EEKVIELAWNSDSEILAVWLED-RVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDP-EKPLRLHVLTSNGQYEIYDFA--  379 (928)
T ss_pred             CceeeEEEECCCCCEEEEEecC-CceEEEeeCCEEEEEEEEEccCCCCCCceEECC-CCCCEEEEEecCCcEEEEEEE--
Confidence            568999999999 666665544 499999877542  2223222 23345588874 456667777766777666642  


Q ss_pred             ceeEEeecccCceEEEeeeC------cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         261 SHLWHIKASASRIKGLASHR------NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       261 ~~~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                                   +.+..++      .-++..=+..++++-.+.......|...........|++++|+++.
T Consensus       380 -------------~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~  438 (928)
T PF04762_consen  380 -------------WDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSN  438 (928)
T ss_pred             -------------EEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCC
Confidence                         1112121      1122222233588888777754455555556677889999998863

>KOG2041|consensus

Probab=99.42  E-value=1.9e-11  Score=102.91  Aligned_cols=260  Identities=11%  Similarity=0.148  Sum_probs=177.0

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe---------------EEEeEEecccCCceeeEEEecCCCEEEEEeC
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ---------------LEKLFKKAHKGTAVNHISIHPSGKLALSVGK  118 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  118 (327)
                      .....|+.|+.+..++++|+.||.+++..+.+..               .-+++ .+|... |.-+.|+.+.+.|-+...
T Consensus        14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtL-eGH~~s-V~vvTWNe~~QKLTtSDt   91 (1189)
T KOG2041|consen   14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTL-EGHNAS-VMVVTWNENNQKLTTSDT   91 (1189)
T ss_pred             CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhh-ccCcce-EEEEEeccccccccccCC
Confidence            4568999999999999999999999999875421               12344 788888 999999999999999999


Q ss_pred             CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-
Q psy7482         119 DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-  196 (327)
Q Consensus       119 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-  196 (327)
                      +|-|.+|-+-.+.....+.-...   .+-|.+++|+.+|..++... ||.|.+=.++..+....--.......+.|++| 
T Consensus        92 ~GlIiVWmlykgsW~EEMiNnRn---KSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~  168 (1189)
T KOG2041|consen   92 SGLIIVWMLYKGSWCEEMINNRN---KSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDL  168 (1189)
T ss_pred             CceEEEEeeecccHHHHHhhCcC---ccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeecccH
Confidence            99999999988876544322222   34499999999999888886 88887776654432211112334557889999 


Q ss_pred             ceEEEeCCCCcEEEEEcCCC-------ceeEE----eeecccceEEEEEEe------cCCCcEEEEecCCCeEEEEEcCC
Q psy7482         197 TTVCTGNEESAITAYNLTDG-------SHLWQ----IKASASRIKGLVFFS------IPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       197 ~~l~~~~~d~~i~i~d~~~~-------~~~~~----~~~~~~~v~~~~~~~------s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      ..++.+-.+|.+.+||....       .+.-.    +......+..+.|..      .|+...|+.+-..|.+.|..-.+
T Consensus       169 ~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eN  248 (1189)
T KOG2041|consen  169 EQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEN  248 (1189)
T ss_pred             HHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcC
Confidence            77777888999999996532       11011    111122345555542      26788999999999999887655


Q ss_pred             CceeEEeecccCceEEEeeeC--cEEEEEecCC---------cEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482         260 GSHLWHIKASASRIKGLASHR--NHLICITSAG---------DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       260 ~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg---------~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                      ......+... -.+.+..|++  ..|+.++.+.         .|.++..-..   ....+  ...+..|++++|-.
T Consensus       249 D~~Pvv~dtg-m~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~G~---i~gtl--kvpg~~It~lsWEg  318 (1189)
T KOG2041|consen  249 DPEPVVVDTG-MKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPYGH---IVGTL--KVPGSCITGLSWEG  318 (1189)
T ss_pred             CCCCeEEecc-cEeecceecCCCcEEEEccCcccccCccccceEEEeccchh---heEEE--ecCCceeeeeEEcC
Confidence            5433333322 4678889998  7888887653         3444443332   12222  23456688888854

>KOG0309|consensus

Probab=99.42  E-value=6e-12  Score=106.08  Aligned_cols=279  Identities=12%  Similarity=0.203  Sum_probs=181.5

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEcccc-cccccccccc--ccEEEEEECCCC--CeEEEecCCCcEEEEEcC--C
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKR-KQSGALMQHE--GTITCLKFTPEG--SHLISCSDDGSIAIFRVG--S   85 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~-~~~~~~~~~~--~~v~~~~~~~~~--~~l~~~~~d~~i~iw~~~--~   85 (327)
                      +++.+++.  .|+-+|.++.-| +.+-|+... .+.+-+. |.  -.|-...|+|..  .+-++......-.+|++.  +
T Consensus        25 ~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~-h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss  102 (1081)
T KOG0309|consen   25 GGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLH-HITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS  102 (1081)
T ss_pred             CcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeee-ccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence            44555555  778888888777 556666543 3333332 32  246677888743  344444445566789884  3


Q ss_pred             CeEEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC-CcEEEee
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE-GLLYAIP  163 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~  163 (327)
                      .+.+..+..+|... |+.+.|+|+ ...+++++-|-.+..||+++..........-    ......+.|+.. +..++..
T Consensus       103 ~~aIef~lhghsra-itd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w----~s~asqVkwnyk~p~vlass  177 (1081)
T KOG0309|consen  103 SNAIEFVLHGHSRA-ITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSW----RSAASQVKWNYKDPNVLASS  177 (1081)
T ss_pred             ccceEEEEecCccc-eeccccCCCCCcceeeccccccceeeeccCCCcceeeeecc----cccCceeeecccCcchhhhc
Confidence            34444444788887 999999994 4688999999999999998765432221111    122567888874 4556666


Q ss_pred             cCCeEEEEEecCCc-eeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEE-eeecccceEEEEEEecC
Q psy7482         164 IQNKAVVFSVEKAG-VLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQ-IKASASRIKGLVFFSIP  238 (327)
Q Consensus       164 ~~~~i~i~d~~~~~-~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~  238 (327)
                      ..+.+.+||.+.+. ++..++ +-..+..+.|..-  +.+++.+.|++|+.||......... ......++..-.+.|-.
T Consensus       178 hg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg  257 (1081)
T KOG0309|consen  178 HGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFG  257 (1081)
T ss_pred             cCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccC
Confidence            68899999998765 555666 6678888888765  7899999999999999865432211 11233445555554222


Q ss_pred             CCcEEEEecCCCeEEEE---------EcCC-CceeEEeecccCceEEEeeeC------------cEEEEEecCCcEEEEE
Q psy7482         239 QETTVCTGNEESAITAY---------NLTD-GSHLWHIKASASRIKGLASHR------------NHLICITSAGDLVVWE  296 (327)
Q Consensus       239 ~~~~l~~~~~d~~i~i~---------d~~~-~~~~~~~~~~~~~v~~~~~~~------------~~l~~~~~dg~v~iw~  296 (327)
                      +|.++.-.-.+..+.++         +..+ .++++++.+|.+.|....|-.            -.|+|-+.|..+++|.
T Consensus       258 ~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWp  337 (1081)
T KOG0309|consen  258 EGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWP  337 (1081)
T ss_pred             ceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeee
Confidence            33333322222234443         3322 358899999999887776643            4699999999999998


Q ss_pred             ccCc
Q psy7482         297 LNED  300 (327)
Q Consensus       297 ~~~~  300 (327)
                      +...
T Consensus       338 I~~~  341 (1081)
T KOG0309|consen  338 IDSQ  341 (1081)
T ss_pred             ccHH
Confidence            8764

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.40  E-value=8.8e-10  Score=89.36  Aligned_cols=293  Identities=13%  Similarity=0.102  Sum_probs=186.9

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCC---------------
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG---------------   76 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---------------   76 (327)
                      .-++...++  .|.+|++....| |.+|.-..+..+..+. | ..|..+.|+|++++|.+-+..+               
T Consensus        32 ~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n  108 (561)
T COG5354          32 NWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKN  108 (561)
T ss_pred             CcchhheeecCcchheehhhccc-eEEccccchhheeeee-c-CCceecccCcccceeeeeccCCccChhhccCCccccC
Confidence            345666666  788888877665 9999988777555554 3 3589999999999999865433               


Q ss_pred             cEEEEEcCCCeEEEeEEecccCCcee-eEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVN-HISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      .+.+||+.++..+..+.........+ -+.|+-+.++++-. ....++++++ ++... ..+....  ....+....|+|
T Consensus       109 ~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~-~~p~~~l--r~~gi~dFsisP  183 (561)
T COG5354         109 NVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIE-EHPFKNL--RPVGILDFSISP  183 (561)
T ss_pred             ceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccc-cCchhhc--cccceeeEEecC
Confidence            59999999999998883332221123 57888888776655 3357999997 43322 1111111  123388999999


Q ss_pred             CCc--EEEee------cCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEe-----------CCCCcEEEEEcC
Q psy7482         156 EGL--LYAIP------IQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTG-----------NEESAITAYNLT  214 (327)
Q Consensus       156 ~~~--~l~~~------~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~-----------~~d~~i~i~d~~  214 (327)
                      .++  .|+.=      ..+.+++|.+..+..+.+.. ....-..+.|.+. .++++-           ..+..+++++++
T Consensus       184 ~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~  263 (561)
T COG5354         184 EGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT  263 (561)
T ss_pred             CCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeec
Confidence            643  33331      25789999998776665544 2233345666665 332211           123568888887


Q ss_pred             CCceeEEeeecccceEEEEEEecCCCcEEE--EecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecC-
Q psy7482         215 DGSHLWQIKASASRIKGLVFFSIPQETTVC--TGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSA-  289 (327)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~--~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d-  289 (327)
                      .... .....-.++|...+|.  |.++.++  +|-.+-.+.++|++.. ...  ......-+.+.|+|  ++++.++-| 
T Consensus       264 e~~i-~V~~~~~~pVhdf~W~--p~S~~F~vi~g~~pa~~s~~~lr~N-l~~--~~Pe~~rNT~~fsp~~r~il~agF~n  337 (561)
T COG5354         264 ERSI-PVEKDLKDPVHDFTWE--PLSSRFAVISGYMPASVSVFDLRGN-LRF--YFPEQKRNTIFFSPHERYILFAGFDN  337 (561)
T ss_pred             cccc-ceeccccccceeeeec--ccCCceeEEecccccceeecccccc-eEE--ecCCcccccccccCcccEEEEecCCc
Confidence            4333 2222557899999996  6666655  4557888999998766 332  33344556788999  888887766 


Q ss_pred             --CcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         290 --GDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       290 --g~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                        |.+-+||.....    ..+ ....+....-+.|+|+
T Consensus       338 l~gni~i~~~~~rf----~~~-~~~~~~n~s~~~wspd  370 (561)
T COG5354         338 LQGNIEIFDPAGRF----KVA-GAFNGLNTSYCDWSPD  370 (561)
T ss_pred             cccceEEeccCCce----EEE-EEeecCCceEeeccCC
Confidence              569999987762    222 1222223444567765

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.39  E-value=2.8e-09  Score=99.21  Aligned_cols=236  Identities=11%  Similarity=0.108  Sum_probs=152.7

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccc--------------ccccEEEEEECCCCCeEEEec-CCCcEEEEEcCCCe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQ--------------HEGTITCLKFTPEGSHLISCS-DDGSIAIFRVGSWQ   87 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~   87 (327)
                      +++++++-..++.|+++|.. ++.+..+.+              .-.....+++.++++.|+++. .++.|+++|..++.
T Consensus       579 ~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~  657 (1057)
T PLN02919        579 NNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALREIDFVNET  657 (1057)
T ss_pred             CCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEEEecCCCE
Confidence            46677777788899999975 433322221              112357889999888666554 45679999987765


Q ss_pred             EEEeEEecc---------------cCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeec------ccc---C
Q psy7482          88 LEKLFKKAH---------------KGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNL------SSY---G  142 (327)
Q Consensus        88 ~~~~~~~~~---------------~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~---~  142 (327)
                      .......+.               ... ...++++| ++.++++...++.|++||..++........      ...   .
T Consensus       658 V~tlag~G~~g~~~~gg~~~~~~~ln~-P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~  736 (1057)
T PLN02919        658 VRTLAGNGTKGSDYQGGKKGTSQVLNS-PWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTS  736 (1057)
T ss_pred             EEEEeccCcccCCCCCChhhhHhhcCC-CeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCcccc
Confidence            332210000               112 46789999 556666667788999999877654221100      000   0


Q ss_pred             ccccceEEEEEccCCcEEEee-c-CCeEEEEEecCCceeeEe-------------c-C--------CCceeEEEeecC-c
Q psy7482         143 VGFENLDSVVWSPEGLLYAIP-I-QNKAVVFSVEKAGVLQTL-------------K-S--------ESKVHSVCFLNE-T  197 (327)
Q Consensus       143 ~~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~d~~~~~~~~~~-------------~-~--------~~~i~~~~~~~~-~  197 (327)
                      ........++++|++..+.++ . ++.|++||+.++......             . .        -.....++++++ .
T Consensus       737 ~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~  816 (1057)
T PLN02919        737 TSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ  816 (1057)
T ss_pred             ccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc
Confidence            111236789999999855544 3 789999999876532111             0 0        113468899998 5


Q ss_pred             eEEEeCCCCcEEEEEcCCCceeEEee-------------ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         198 TVCTGNEESAITAYNLTDGSHLWQIK-------------ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       198 ~l~~~~~d~~i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      .+++-..++.|++||..++.......             +.-.....+++.  ++|+.+++-+.++.|++||+.+++.
T Consensus       817 LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd--~dG~lyVaDt~Nn~Irvid~~~~~~  892 (1057)
T PLN02919        817 IYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALG--ENGRLFVADTNNSLIRYLDLNKGEA  892 (1057)
T ss_pred             EEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEe--CCCCEEEEECCCCEEEEEECCCCcc
Confidence            77777889999999998765442221             111246678884  8999999989999999999988764

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.37  E-value=2e-09  Score=90.44  Aligned_cols=223  Identities=10%  Similarity=0.044  Sum_probs=132.1

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCe-EEEecC---CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH-LISCSD---DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS  109 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~  109 (327)
                      ..|.+-|..... .+.+.... ......|+|||+. ++..+.   +..|.++|+.+++.....  ...+. .....|+||
T Consensus       169 ~~l~~~d~dg~~-~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt--~~~g~-~~~~~~SPD  243 (419)
T PRK04043        169 SNIVLADYTLTY-QKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA--SSQGM-LVVSDVSKD  243 (419)
T ss_pred             ceEEEECCCCCc-eeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe--cCCCc-EEeeEECCC
Confidence            345555553332 33333233 6788999999985 554333   356899999888765544  23333 566789999


Q ss_pred             CCEEEEE-eCC--CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCC----eEEEEEecCCceeeEe
Q psy7482         110 GKLALSV-GKD--KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN----KAVVFSVEKAGVLQTL  182 (327)
Q Consensus       110 ~~~l~~~-~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~i~i~d~~~~~~~~~~  182 (327)
                      |+.++.. +.+  ..|.++|+.+++..........      .....|+|||+.++..++.    .|+++|+.+++..+..
T Consensus       244 G~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~------d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt  317 (419)
T PRK04043        244 GSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGI------DVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVV  317 (419)
T ss_pred             CCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCc------cCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCc
Confidence            9876654 333  4688888877765443322221      2345799999877776532    7888898877764433


Q ss_pred             cCCCceeEEEeecC-ceEEEeCCC---------CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC---
Q psy7482         183 KSESKVHSVCFLNE-TTVCTGNEE---------SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE---  249 (327)
Q Consensus       183 ~~~~~i~~~~~~~~-~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d---  249 (327)
                      .....  ...|+|+ +.++.....         ..|.+.|+.++.. ..+... .......|  +|||+.++..+.+   
T Consensus       318 ~~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p~~--SPDG~~I~f~~~~~~~  391 (419)
T PRK04043        318 FHGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFPRF--SSDGGSIMFIKYLGNQ  391 (419)
T ss_pred             cCCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCeEE--CCCCCEEEEEEccCCc
Confidence            22211  2489999 555544322         3688889877754 333322 22334667  5999987765433   


Q ss_pred             CeEEEEEcCCCceeEEeecccCceE
Q psy7482         250 SAITAYNLTDGSHLWHIKASASRIK  274 (327)
Q Consensus       250 ~~i~i~d~~~~~~~~~~~~~~~~v~  274 (327)
                      ..+.+.++.. .....+....+.+.
T Consensus       392 ~~L~~~~l~g-~~~~~l~~~~g~~~  415 (419)
T PRK04043        392 SALGIIRLNY-NKSFLFPLKVGKIQ  415 (419)
T ss_pred             EEEEEEecCC-CeeEEeecCCCccC
Confidence            2366677644 33333433333343

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.37  E-value=1.8e-10  Score=87.80  Aligned_cols=276  Identities=13%  Similarity=0.162  Sum_probs=167.2

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccc-----ccccccccc------------ccEEEEEECCCCC--eEEE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-----QSGALMQHE------------GTITCLKFTPEGS--HLIS   71 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~~--~l~~   71 (327)
                      ....|+++.|  .|.+|++|...|.|.++.-....     ....+++|.            ..|..+.|..++.  .++.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            4567899999  78999999999999999754332     223345553            4688888876543  4666


Q ss_pred             ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-ceeeeeecc-ccCccccceE
Q psy7482          72 CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYITNLS-SYGVGFENLD  149 (327)
Q Consensus        72 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~-~~~~~~~~v~  149 (327)
                      .+.|++|++|.+........- ...    ...---+|-+.-+.+.   ..+++=.+... +.+...+.. ....|..-+.
T Consensus       105 stNdktiKlWKiyeknlk~va-~nn----ls~~~~~~~~g~~~s~---~~l~lprls~hd~iiaa~p~rvyaNaH~yhiN  176 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVA-ENN----LSDSFHSPMGGPLTST---KELLLPRLSEHDEIIAAKPCRVYANAHPYHIN  176 (460)
T ss_pred             ecCCceeeeeeeecccchhhh-ccc----cccccccccCCCcCCH---HHhhcccccccceEEEeccceeccccceeEee
Confidence            778999999998754322111 000    0000001111001000   00111111000 000000000 0012233499


Q ss_pred             EEEEccCCcEEEeecCCeEEEEEecCCcee---eEec-C-----CCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCce
Q psy7482         150 SVVWSPEGLLYAIPIQNKAVVFSVEKAGVL---QTLK-S-----ESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSH  218 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~---~~~~-~-----~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~  218 (327)
                      ++.|..|.+.++++.+-.|.+|++.-....   ..++ +     ..-|++..|+|.  ..+.-.+..|.|++-|++....
T Consensus       177 SiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~al  256 (460)
T COG5170         177 SISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSAL  256 (460)
T ss_pred             eeeecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhh
Confidence            999999999999999999999988643322   2222 2     235889999997  7788889999999999984321


Q ss_pred             ------eEE----------eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-eeEEeeccc-----------
Q psy7482         219 ------LWQ----------IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-HLWHIKASA-----------  270 (327)
Q Consensus       219 ------~~~----------~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~-----------  270 (327)
                            +..          +..-...|..+.|+  ++|+++++-+. -++++||++..+ ++.++..|.           
T Consensus       257 cdn~~klfe~~~D~v~~~ff~eivsSISD~kFs--~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YE  333 (460)
T COG5170         257 CDNSKKLFELTIDGVDVDFFEEIVSSISDFKFS--DNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYE  333 (460)
T ss_pred             ccCchhhhhhccCcccchhHHHHhhhhcceEEc--CCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhh
Confidence                  111          11223467788894  89999988765 589999998654 777776552           


Q ss_pred             -CceE---EEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482         271 -SRIK---GLASHR--NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       271 -~~v~---~~~~~~--~~l~~~~~dg~v~iw~~~~  299 (327)
                       ..|.   .+.|+.  ..+.+|+..+..-++-..+
T Consensus       334 nDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~s  368 (460)
T COG5170         334 NDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTDS  368 (460)
T ss_pred             ccceeeeEEEEecCCcccccccccccceeeecccc
Confidence             2222   356666  7788888877777776443

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.37  E-value=1.3e-09  Score=88.48  Aligned_cols=254  Identities=11%  Similarity=0.082  Sum_probs=170.2

Q ss_pred             EEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEE
Q psy7482          37 VLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV  116 (327)
Q Consensus        37 ~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  116 (327)
                      ..|+..+......+....-++..++|||.|.+|++.... .|.+|.-..+..+..+   .... |..+.|+|.+++|.+=
T Consensus        15 ~f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~---~~~~-V~~~~fSP~~kYL~tw   89 (561)
T COG5354          15 VFWNSQSEVIHTRFESENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRF---RHPD-VKYLDFSPNEKYLVTW   89 (561)
T ss_pred             EeecCccccccccccccCcchhheeecCcchheehhhcc-ceEEccccchhheeee---ecCC-ceecccCcccceeeee
Confidence            345555554444455467789999999999999987766 5899988777644444   2333 9999999999999986


Q ss_pred             eCCC---------------CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeE
Q psy7482         117 GKDK---------------TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQT  181 (327)
Q Consensus       117 ~~dg---------------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~  181 (327)
                      +..+               .+.+||..++..+..+........  .-.-+.|+-+.+++|--....++++++...-....
T Consensus        90 ~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~--~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p  167 (561)
T COG5354          90 SREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYL--GWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHP  167 (561)
T ss_pred             ccCCccChhhccCCccccCceeEEeccCceeEeeccccCCccc--ccceeeeeecchhhhhhccCeEEEEecCCccccCc
Confidence            6533               499999999998777665554211  12267888888887777788999999732222222


Q ss_pred             ec--CCCceeEEEeecC---ceEEE-----eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEe-----
Q psy7482         182 LK--SESKVHSVCFLNE---TTVCT-----GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG-----  246 (327)
Q Consensus       182 ~~--~~~~i~~~~~~~~---~~l~~-----~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~-----  246 (327)
                      +.  ....+....++|.   ..|+.     ....+.+++|.+..+..+.+-.-....-..+.|.  +.|++|+.-     
T Consensus       168 ~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~--~~g~~ll~l~~t~~  245 (561)
T COG5354         168 FKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQ--VLGKYLLVLVMTHT  245 (561)
T ss_pred             hhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEe--cCCceEEEEEEEee
Confidence            22  2467888889886   23332     4677889999998776655543333333456664  677766531     


Q ss_pred             -c-----CCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEE--EecCCcEEEEEccCc
Q psy7482         247 -N-----EESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLIC--ITSAGDLVVWELNED  300 (327)
Q Consensus       247 -~-----~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~--~~~dg~v~iw~~~~~  300 (327)
                       +     .+..+++++++........ .-.++|...+|.|  +.+++  |-.+-.+.++|++..
T Consensus       246 ksnKsyfgesnLyl~~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N  308 (561)
T COG5354         246 KSNKSYFGESNLYLLRITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN  308 (561)
T ss_pred             ecccceeccceEEEEeecccccceec-cccccceeeeecccCCceeEEecccccceeecccccc
Confidence             1     1356888888754433333 5578999999998  44333  346677778877665

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.37  E-value=1.7e-08  Score=92.36  Aligned_cols=279  Identities=14%  Similarity=0.204  Sum_probs=177.3

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEcc---------------c--------ccccccccc----------------
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMV---------------K--------RKQSGALMQ----------------   52 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~---------------~--------~~~~~~~~~----------------   52 (327)
                      ...|.|++|  |+.+||....++++.+-+-.               .        |+...+|+|                
T Consensus       120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~  199 (928)
T PF04762_consen  120 DSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVP  199 (928)
T ss_pred             cCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCC
Confidence            467999999  99999988888888776321               0        111111111                


Q ss_pred             --------ccccEEEEEECCCCCeEEEecC------CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC
Q psy7482          53 --------HEGTITCLKFTPEGSHLISCSD------DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK  118 (327)
Q Consensus        53 --------~~~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  118 (327)
                              +...-..++|..||+++|+.+-      -..++||+-+ |....+- ..-.+- -.+++|.|.|+++++...
T Consensus       200 ~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stS-E~v~gL-e~~l~WrPsG~lIA~~q~  276 (928)
T PF04762_consen  200 KVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTS-EPVDGL-EGALSWRPSGNLIASSQR  276 (928)
T ss_pred             ccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEecc-ccCCCc-cCCccCCCCCCEEEEEEE
Confidence                    2224467889999999998764      2579999865 6655444 322332 457899999999998764


Q ss_pred             ---CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCcee--eEec--CCCceeEE
Q psy7482         119 ---DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL--QTLK--SESKVHSV  191 (327)
Q Consensus       119 ---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~--~~~~--~~~~i~~~  191 (327)
                         ...|.+|. ++|-.-..+.++.. .....+..+.|++++..||+.....|.+|-..+..-.  +.+.  ....+..+
T Consensus       277 ~~~~~~VvFfE-rNGLrhgeF~l~~~-~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~  354 (928)
T PF04762_consen  277 LPDRHDVVFFE-RNGLRHGEFTLRFD-PEEEKVIELAWNSDSEILAVWLEDRVQLWTRSNYHWYLKQEIRFSSSESVNFV  354 (928)
T ss_pred             cCCCcEEEEEe-cCCcEeeeEecCCC-CCCceeeEEEECCCCCEEEEEecCCceEEEeeCCEEEEEEEEEccCCCCCCce
Confidence               34577777 45655555555431 1234589999999999999988667999998876522  2222  34456669


Q ss_pred             EeecC--ceEEEeCCCCcEEEEEcC----CC----------------cee----------------EEeeecccceEEEE
Q psy7482         192 CFLNE--TTVCTGNEESAITAYNLT----DG----------------SHL----------------WQIKASASRIKGLV  233 (327)
Q Consensus       192 ~~~~~--~~l~~~~~d~~i~i~d~~----~~----------------~~~----------------~~~~~~~~~v~~~~  233 (327)
                      .|+|.  ..|...+.+|.+..++..    .+                ..+                ..+. -..+|.+++
T Consensus       355 ~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~-~~~~v~~va  433 (928)
T PF04762_consen  355 KWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELE-LPSPVNDVA  433 (928)
T ss_pred             EECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEc-CCCCcEEEE
Confidence            99996  567776666766555432    11                100                1111 235788999


Q ss_pred             EEecCCCcEEEEecCCCeEEEEEcCCCc--------eeEEee----------cccCceEEEeeeC--cEEEEEecC---C
Q psy7482         234 FFSIPQETTVCTGNEESAITAYNLTDGS--------HLWHIK----------ASASRIKGLASHR--NHLICITSA---G  290 (327)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~--------~~~~~~----------~~~~~v~~~~~~~--~~l~~~~~d---g  290 (327)
                      |.  +++..+++-..||.|.+|......        ....+.          .....+..++|..  ..++....+   .
T Consensus       434 f~--~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (928)
T PF04762_consen  434 FS--PSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQS  511 (928)
T ss_pred             Ee--CCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccc
Confidence            96  677668999999999999854322        111111          1234567788877  344444433   4


Q ss_pred             cEEEEEccCc
Q psy7482         291 DLVVWELNED  300 (327)
Q Consensus       291 ~v~iw~~~~~  300 (327)
                      .+.++++...
T Consensus       512 ~i~~~~~~~~  521 (928)
T PF04762_consen  512 KIVLVDIDDS  521 (928)
T ss_pred             eEEEEEeccC
Confidence            6888887443

>KOG2315|consensus

Probab=99.36  E-value=3e-09  Score=87.25  Aligned_cols=271  Identities=13%  Similarity=0.192  Sum_probs=165.1

Q ss_pred             CeEEEEEccccccccccccc---cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          34 ETVVLYDMVKRKQSGALMQH---EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      -.+.+|+....+.......+   ..+++..+++++|++++.+. +..++|++..++..+.+. ...  . +.++.|+|-+
T Consensus        11 e~~~l~~~~~~~~~~~~f~~~~~~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~-~~~--~-~~~L~fSP~g   85 (566)
T KOG2315|consen   11 EGFYLFNGPGSKDAVTVFEQNKTSRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCV-ELK--K-TYDLLFSPKG   85 (566)
T ss_pred             ceeEEeccCCccccccccccCCCCCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEe-ccc--e-eeeeeecccc
Confidence            34888887654433333333   44577888999998887665 558999999888644443 222  3 8999999999


Q ss_pred             CEEEEEe-----CC-----CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceee
Q psy7482         111 KLALSVG-----KD-----KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQ  180 (327)
Q Consensus       111 ~~l~~~~-----~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~  180 (327)
                      .+|.+=-     .+     -.+.+|+++++.....+.....     .-++..|++|..+.+--..+.+.+|+..+.+.+.
T Consensus        86 ~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q-----~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~  160 (566)
T KOG2315|consen   86 NYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQ-----NGWVPQFSIDESLAARLVSNEVQFYDLGSFKTIQ  160 (566)
T ss_pred             cccccccccccccCCCCCCCceeeeeeccceehhheehhhh-----cCcccccccchhhhhhhhcceEEEEecCCcccee
Confidence            8886521     12     3477999988544333332222     1246777777766555557777888776644333


Q ss_pred             EecCCCceeEEEeecC---ceEEE-----eCCCCcEEEEEcC--------------------------------------
Q psy7482         181 TLKSESKVHSVCFLNE---TTVCT-----GNEESAITAYNLT--------------------------------------  214 (327)
Q Consensus       181 ~~~~~~~i~~~~~~~~---~~l~~-----~~~d~~i~i~d~~--------------------------------------  214 (327)
                      .--+...++.+.++|.   ..+++     .+.-..+++|...                                      
T Consensus       161 ~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdV  240 (566)
T KOG2315|consen  161 HKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDV  240 (566)
T ss_pred             eeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEee
Confidence            3224555555555554   12221     2333344444432                                      


Q ss_pred             -------------------CCceeEEeeecccceEEEEEEecCCCcEEEE--ecCCCeEEEEEcCCCceeEEeecccCce
Q psy7482         215 -------------------DGSHLWQIKASASRIKGLVFFSIPQETTVCT--GNEESAITAYNLTDGSHLWHIKASASRI  273 (327)
Q Consensus       215 -------------------~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~v  273 (327)
                                         .......+ ...++|.++.|+  ++++-+++  |-.-..+.|||++ +.++..+  .+++-
T Consensus       241 Dktn~SYYGEq~Lyll~t~g~s~~V~L-~k~GPVhdv~W~--~s~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpR  314 (566)
T KOG2315|consen  241 DKTNASYYGEQTLYLLATQGESVSVPL-LKEGPVHDVTWS--PSGREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPR  314 (566)
T ss_pred             cCCCccccccceEEEEEecCceEEEec-CCCCCceEEEEC--CCCCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCc
Confidence                               11111111 236789999995  77765544  5566789999974 5555555  35577


Q ss_pred             EEEeeeC--cEEEEEecC---CcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         274 KGLASHR--NHLICITSA---GDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       274 ~~~~~~~--~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +++-|+|  ++|+.++-+   |.+-|||+...     ..+..... ..-+-.+|+||-
T Consensus       315 N~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~-----K~i~~~~a-~~tt~~eW~PdG  366 (566)
T KOG2315|consen  315 NTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR-----KLIAKFKA-ANTTVFEWSPDG  366 (566)
T ss_pred             cceEECCCCCEEEEeecCCCCCceEEEeccch-----hhcccccc-CCceEEEEcCCC
Confidence            8899999  788777754   77999999886     22322222 234556888863

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.35  E-value=2.3e-08  Score=78.65  Aligned_cols=211  Identities=15%  Similarity=0.163  Sum_probs=143.7

Q ss_pred             EEEECC-CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEe-cCCCEEEEEeCCCCEEEEEcCCCceeeee
Q psy7482          59 CLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH-PSGKLALSVGKDKTLRTWNLVKGRSAYIT  136 (327)
Q Consensus        59 ~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  136 (327)
                      ++.|.+ ++.++++--..+.|..|+..+++....-    ... ...+.+. +++ .++.+.. +.+.++|..+++.....
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~----~~~-~~G~~~~~~~g-~l~v~~~-~~~~~~d~~~g~~~~~~   76 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVID----LPG-PNGMAFDRPDG-RLYVADS-GGIAVVDPDTGKVTVLA   76 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE----SSS-EEEEEEECTTS-EEEEEET-TCEEEEETTTTEEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEe----cCC-CceEEEEccCC-EEEEEEc-CceEEEecCCCcEEEEe
Confidence            567888 6777777777899999999887654321    122 5677777 565 5555555 45667799888766555


Q ss_pred             eccccCccccceEEEEEccCCcEEEeec-C--------CeEEEEEecCCceeeEecCCCceeEEEeecC-ce-EEEeCCC
Q psy7482         137 NLSSYGVGFENLDSVVWSPEGLLYAIPI-Q--------NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TT-VCTGNEE  205 (327)
Q Consensus       137 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~--------~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~-l~~~~~d  205 (327)
                      ............+.+++.|+|+++++.. .        |.+..++.. ++.......-...+.++|+|+ +. +++-+..
T Consensus        77 ~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~  155 (246)
T PF08450_consen   77 DLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFN  155 (246)
T ss_dssp             EEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTT
T ss_pred             eccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeeccccc
Confidence            5532222344589999999999777754 1        567777776 555455555567889999999 44 4577888


Q ss_pred             CcEEEEEcCCCce-e---EEe---eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482         206 SAITAYNLTDGSH-L---WQI---KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       206 ~~i~i~d~~~~~~-~---~~~---~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      +.|..|++..... +   ..+   ....+..-.+++  +.+|++.++....+.|.+++.+ |+.+..+......+++++|
T Consensus       156 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~v--D~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~f  232 (246)
T PF08450_consen  156 GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAV--DSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAF  232 (246)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEE--BTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEE
T ss_pred             ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceE--cCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEE
Confidence            9999999863221 1   122   222224677888  4889888887788999999976 8888888877668999999


Q ss_pred             eC
Q psy7482         279 HR  280 (327)
Q Consensus       279 ~~  280 (327)
                      ..
T Consensus       233 gg  234 (246)
T PF08450_consen  233 GG  234 (246)
T ss_dssp             ES
T ss_pred             EC
Confidence            53

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.33  E-value=4.6e-08  Score=76.50  Aligned_cols=244  Identities=11%  Similarity=0.185  Sum_probs=155.0

Q ss_pred             cCCccEEEEEe--CCCEEEEecC---CCeEEEEEccc--cccc--cccccccccEEEEEECCCCCeEEEecC-CCcEEEE
Q psy7482          12 SHTASVRSVAA--TSKLAASSGA---DETVVLYDMVK--RKQS--GALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIF   81 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~---dg~v~~w~~~~--~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw   81 (327)
                      .+.+..+-|++  +++.|.++..   +|.|..|.+..  |+..  ........+-+.+++++++++++++.. .|.|.++
T Consensus        37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~  116 (346)
T COG2706          37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVY  116 (346)
T ss_pred             cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEE
Confidence            35566777777  6667877754   46677777664  4432  111122233488999999999998876 5789999


Q ss_pred             EcCC-CeEEEeEE-ecccC--------C-ceeeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          82 RVGS-WQLEKLFK-KAHKG--------T-AVNHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        82 ~~~~-~~~~~~~~-~~~~~--------~-~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      -++. |.+..... ..|.+        . -+....+.|++++|++... ...|.+|++..++........-.  .....+
T Consensus       117 p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~--~G~GPR  194 (346)
T COG2706         117 PLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVK--PGAGPR  194 (346)
T ss_pred             EcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccC--CCCCcc
Confidence            8854 43322211 11111        1 1677889999999998753 24699999997765443322221  122378


Q ss_pred             EEEEccCCcEEEeec--CCeEEEEEecCC-ceeeEec----------CCCceeEEEeecCceEEEeCC--CCcEEEEEcC
Q psy7482         150 SVVWSPEGLLYAIPI--QNKAVVFSVEKA-GVLQTLK----------SESKVHSVCFLNETTVCTGNE--ESAITAYNLT  214 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~--~~~i~i~d~~~~-~~~~~~~----------~~~~i~~~~~~~~~~l~~~~~--d~~i~i~d~~  214 (327)
                      .+.|+|++++..+..  +++|.+|..... ..+..++          .......+..++|+.++-++.  ...|.+|.+.
T Consensus       195 Hi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~  274 (346)
T COG2706         195 HIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVD  274 (346)
T ss_pred             eEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEc
Confidence            999999999876664  899999998773 2222221          345677888999965554443  3467777765


Q ss_pred             CC-ceeEE---eeecccceEEEEEEecCCCcEEEEecCCC-eEEEEEcCC
Q psy7482         215 DG-SHLWQ---IKASASRIKGLVFFSIPQETTVCTGNEES-AITAYNLTD  259 (327)
Q Consensus       215 ~~-~~~~~---~~~~~~~v~~~~~~~s~~~~~l~~~~~d~-~i~i~d~~~  259 (327)
                      .. ..+..   ...+....+...+  ++.+++|+++.+++ .|.+|....
T Consensus       275 ~~~g~L~~~~~~~teg~~PR~F~i--~~~g~~Liaa~q~sd~i~vf~~d~  322 (346)
T COG2706         275 PDGGKLELVGITPTEGQFPRDFNI--NPSGRFLIAANQKSDNITVFERDK  322 (346)
T ss_pred             CCCCEEEEEEEeccCCcCCcccee--CCCCCEEEEEccCCCcEEEEEEcC
Confidence            43 22222   2233334566777  48999999888764 588887653

>KOG4532|consensus

Probab=99.33  E-value=8.1e-10  Score=82.51  Aligned_cols=195  Identities=11%  Similarity=0.013  Sum_probs=135.6

Q ss_pred             CCCEEEEecCCCeEEEEEccccccc-cccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCc
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQS-GALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA  100 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~  100 (327)
                      .-.+||.||..|...+|...+.+.. +....|...|+-+.=.- ..-.+..++.|.++++.+++-+...... ....-. 
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~-h~~~~~-  160 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAV-HNQNLT-  160 (344)
T ss_pred             cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccccee-eccccc-
Confidence            4568999999999999998865533 33334444443221111 1224667888888998888654433333 112223 


Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCce-eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRS-AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV  178 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~  178 (327)
                      +.++.++++++++++.+....|..|.+..... .........   .+.-.+..|+.....+|++. ||++.|||++....
T Consensus       161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t---~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~t  237 (344)
T KOG4532|consen  161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPT---SDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMAT  237 (344)
T ss_pred             eeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEeccc---CCCceeeeeccCcceEEEEecCCcEEEEEeccccc
Confidence            78899999999999999999999999875432 222222222   23367889999999999998 99999999987653


Q ss_pred             eeEe-----c-CCCceeEEEeecC---ceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482         179 LQTL-----K-SESKVHSVCFLNE---TTVCTGNEESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       179 ~~~~-----~-~~~~i~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~  222 (327)
                      ....     . |.+.+..+.|++.   .+|+..-.-+.+.+.|++++...+.+
T Consensus       238 pm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I  290 (344)
T KOG4532|consen  238 PMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVI  290 (344)
T ss_pred             chhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEE
Confidence            3222     1 7889999999975   56777777788999999998765554

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.33  E-value=1.3e-08  Score=94.80  Aligned_cols=239  Identities=13%  Similarity=0.101  Sum_probs=153.3

Q ss_pred             EEEEECCC-CCeEEEecCCCcEEEEEcCCCeEEEeEEe-cc------------cCCceeeEEEecCCCEEEEEeC-CCCE
Q psy7482          58 TCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEKLFKK-AH------------KGTAVNHISIHPSGKLALSVGK-DKTL  122 (327)
Q Consensus        58 ~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~------------~~~~v~~~~~~~~~~~l~~~~~-dg~i  122 (327)
                      ..++++++ ++.+++-..++.|.++|... +.+..+.. +.            ... ...+++.++++.|+.+.. .+.|
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G-~~i~~ig~~g~~G~~dG~~~~a~f~~-P~GIavd~~gn~LYVaDt~n~~I  648 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDG-NFIVQIGSTGEEGLRDGSFEDATFNR-PQGLAYNAKKNLLYVADTENHAL  648 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCC-CEEEEEccCCCcCCCCCchhccccCC-CcEEEEeCCCCEEEEEeCCCceE
Confidence            35777764 55666667788899999764 44433311 11            122 578999998877666554 5679


Q ss_pred             EEEEcCCCceeeeeecccc-----C------ccccceEEEEEccC-CcEEEeec-CCeEEEEEecCCceeeEec------
Q psy7482         123 RTWNLVKGRSAYITNLSSY-----G------VGFENLDSVVWSPE-GLLYAIPI-QNKAVVFSVEKAGVLQTLK------  183 (327)
Q Consensus       123 ~iwd~~~~~~~~~~~~~~~-----~------~~~~~v~~~~~~~~-~~~l~~~~-~~~i~i~d~~~~~~~~~~~------  183 (327)
                      +.+|..++...........     .      ........++++|+ +.++++.. ++.|++||..++.......      
T Consensus       649 r~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~  728 (1057)
T PLN02919        649 REIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERN  728 (1057)
T ss_pred             EEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCcccc
Confidence            9999877543221110000     0      00123568999994 55555544 7899999987765432110      


Q ss_pred             ---------CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCceeEEeee-------------c--------ccceEE
Q psy7482         184 ---------SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSHLWQIKA-------------S--------ASRIKG  231 (327)
Q Consensus       184 ---------~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------~--------~~~v~~  231 (327)
                               .-.....++++|+ + ++++.+.++.|++||+.++.......+             .        -.....
T Consensus       729 ~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~G  808 (1057)
T PLN02919        729 LNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLG  808 (1057)
T ss_pred             CCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCce
Confidence                     0124567999998 4 566677789999999987653211100             0        012357


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee-------------cccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK-------------ASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      +++.  ++|..+++-..++.|++||..++.......             +.-.....+++++  +++++-+.++.|++||
T Consensus       809 vavd--~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid  886 (1057)
T PLN02919        809 VLCA--KDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLD  886 (1057)
T ss_pred             eeEe--CCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEE
Confidence            7774  889988888999999999998776543221             1112567889988  7777778889999999


Q ss_pred             ccCc
Q psy7482         297 LNED  300 (327)
Q Consensus       297 ~~~~  300 (327)
                      +.++
T Consensus       887 ~~~~  890 (1057)
T PLN02919        887 LNKG  890 (1057)
T ss_pred             CCCC
Confidence            9886

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.32  E-value=1.4e-08  Score=82.05  Aligned_cols=163  Identities=10%  Similarity=0.222  Sum_probs=126.0

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCC-cEEEEEcCCCeEEEeEEecccCCce
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG-SIAIFRVGSWQLEKLFKKAHKGTAV  101 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~~~~~~~v  101 (327)
                      +|++++..| .|...|.+...+-.++.  +|...|.-..+..+++-++.|..|| .+-|+|.++++....  ...-+. |
T Consensus       331 ~Gd~ia~VS-RGkaFi~~~~~~~~iqv--~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~--e~~lg~-I  404 (668)
T COG4946         331 NGDYIALVS-RGKAFIMRPWDGYSIQV--GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRI--EKDLGN-I  404 (668)
T ss_pred             CCcEEEEEe-cCcEEEECCCCCeeEEc--CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEe--eCCccc-e
Confidence            788998887 56777777655544332  4667788888888888899999999 899999998775544  345555 9


Q ss_pred             eeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C----CeEEEEEecCC
Q psy7482         102 NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q----NKAVVFSVEKA  176 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~----~~i~i~d~~~~  176 (327)
                      .++..+++|++++.+.....|.+.|+++++....-+..     .+-|..+.|+|+++++|-+. +    ..|+++|+..+
T Consensus       405 ~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~-----~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~  479 (668)
T COG4946         405 EAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSE-----YGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGG  479 (668)
T ss_pred             EEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccc-----cceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCC
Confidence            99999999999999998899999999999865433222     23499999999999999885 4    47999999988


Q ss_pred             ceeeEecCCCceeEEEeecC
Q psy7482         177 GVLQTLKSESKVHSVCFLNE  196 (327)
Q Consensus       177 ~~~~~~~~~~~i~~~~~~~~  196 (327)
                      +........+.=.+-+|.||
T Consensus       480 Kiy~vTT~ta~DfsPaFD~d  499 (668)
T COG4946         480 KIYDVTTPTAYDFSPAFDPD  499 (668)
T ss_pred             eEEEecCCcccccCcccCCC
Confidence            87766554444455667777

>KOG3914|consensus

Probab=99.31  E-value=2.5e-10  Score=89.76  Aligned_cols=159  Identities=14%  Similarity=0.112  Sum_probs=112.0

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCe----EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEE---EEEcC
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ----LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR---TWNLV  128 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~---iwd~~  128 (327)
                      ....+..++.++++|++..+....+++.....    +.... ... .. -+.+.|..+......+..-|.++   +|...
T Consensus        64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~-~v~-~~-~~ai~~~~~~~sv~v~dkagD~~~~di~s~~  140 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVS-CVP-KR-PTAISFIREDTSVLVADKAGDVYSFDILSAD  140 (390)
T ss_pred             cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEe-ecc-cC-cceeeeeeccceEEEEeecCCceeeeeeccc
Confidence            34556678889999999888887777765433    22222 111 11 45556655555555554444444   44443


Q ss_pred             CCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeecCceEEEeCCC
Q psy7482         129 KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNETTVCTGNEE  205 (327)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d  205 (327)
                      .+.....      -.|...+..++++||+++++++. |..|++-....-..+..+-  |..-|..++.-++..|++++.|
T Consensus       141 ~~~~~~~------lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD  214 (390)
T KOG3914|consen  141 SGRCEPI------LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGD  214 (390)
T ss_pred             ccCcchh------hhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCC
Confidence            3333222      23345599999999999999998 9999998877666666554  8889999999999889999999


Q ss_pred             CcEEEEEcCCCceeEEee
Q psy7482         206 SAITAYNLTDGSHLWQIK  223 (327)
Q Consensus       206 ~~i~i~d~~~~~~~~~~~  223 (327)
                      +++++||+++++.+.++.
T Consensus       215 ~tlr~Wd~~sgk~L~t~d  232 (390)
T KOG3914|consen  215 KTLRLWDITSGKLLDTCD  232 (390)
T ss_pred             CcEEEEecccCCcccccc
Confidence            999999999999887664

>KOG3914|consensus

Probab=99.31  E-value=5.3e-11  Score=93.44  Aligned_cols=159  Identities=9%  Similarity=0.099  Sum_probs=117.1

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCce----eeeeeccccCccccceEEEEEccCCcEEEeec----CCeEEEEE
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRS----AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNKAVVFS  172 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d  172 (327)
                      ...+..++.+++++.+..+....+++......    ......+..      ..++.|..+.....++.    ...+.+|.
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~------~~ai~~~~~~~sv~v~dkagD~~~~di~s  138 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKR------PTAISFIREDTSVLVADKAGDVYSFDILS  138 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccC------cceeeeeeccceEEEEeecCCceeeeeec
Confidence            34456777888899888888877877765432    111222221      44555555444443332    34566666


Q ss_pred             ecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEe-eecccceEEEEEEecCCCcEEEEecCCC
Q psy7482         173 VEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQI-KASASRIKGLVFFSIPQETTVCTGNEES  250 (327)
Q Consensus       173 ~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~  250 (327)
                      ...+.....+.|-+.++.++++|| ..++++..|..|++-.......+..+ -+|..-|..++.   -++..|++++.|+
T Consensus       139 ~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl---~~~~~LlS~sGD~  215 (390)
T KOG3914|consen  139 ADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISL---TDNYLLLSGSGDK  215 (390)
T ss_pred             ccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeee---ccCceeeecCCCC
Confidence            666777777889999999999999 89999999999999888766666665 579999999998   6778899999999


Q ss_pred             eEEEEEcCCCceeEEeec
Q psy7482         251 AITAYNLTDGSHLWHIKA  268 (327)
Q Consensus       251 ~i~i~d~~~~~~~~~~~~  268 (327)
                      ++++||+.+|+.+.++..
T Consensus       216 tlr~Wd~~sgk~L~t~dl  233 (390)
T KOG3914|consen  216 TLRLWDITSGKLLDTCDL  233 (390)
T ss_pred             cEEEEecccCCcccccch
Confidence            999999999998876653

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.31  E-value=4.8e-09  Score=84.66  Aligned_cols=142  Identities=15%  Similarity=0.259  Sum_probs=112.3

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCC-eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADE-TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg-~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      +|.+.|.-..+  +++-++.|..|| .+-|+|..+++.. .+...-+.|.++..+|+|++++.+.....+.+.|+++++.
T Consensus       357 ~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~k-r~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv  435 (668)
T COG4946         357 GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVK-RIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV  435 (668)
T ss_pred             CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEE-EeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence            67788888777  778899999999 8999999877644 3444567899999999999999999999999999999887


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeCCC----CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDK----TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      ...- +...+- |+...|+|+++++|-+--+|    .|+++|+..++..........      -.+-+|.|++++|..
T Consensus       436 ~~id-kS~~~l-Itdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~------DfsPaFD~d~ryLYf  505 (668)
T COG4946         436 RLID-KSEYGL-ITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAY------DFSPAFDPDGRYLYF  505 (668)
T ss_pred             eEec-ccccce-eEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCccc------ccCcccCCCCcEEEE
Confidence            5544 555566 99999999999999876554    699999998876555443333      445678888886543

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.30  E-value=6e-08  Score=76.25  Aligned_cols=213  Identities=13%  Similarity=0.151  Sum_probs=136.9

Q ss_pred             EEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEEC-CCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          19 SVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFT-PEGSHLISCSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        19 ~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      +.+|   ++.++++--..+.|..|+..+++... +....  ...+++. +++ .|+.+... .+.++|..+++.......
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g-~l~v~~~~-~~~~~d~~~g~~~~~~~~   78 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDG-RLYVADSG-GIAVVDPDTGKVTVLADL   78 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTS-EEEEEETT-CEEEEETTTTEEEEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCC-EEEEEEcC-ceEEEecCCCcEEEEeec
Confidence            3455   46677777788999999988776432 22122  6677777 565 45555554 456669998876655532


Q ss_pred             c--c-cCCceeeEEEecCCCEEEEEeCC--------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          95 A--H-KGTAVNHISIHPSGKLALSVGKD--------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        95 ~--~-~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      .  . .....+.+++.++|++.++....        |.|..++.. ++.........      ..+.++|+|+++.|.++
T Consensus        79 ~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~------~pNGi~~s~dg~~lyv~  151 (246)
T PF08450_consen   79 PDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLG------FPNGIAFSPDGKTLYVA  151 (246)
T ss_dssp             ETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEES------SEEEEEEETTSSEEEEE
T ss_pred             cCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcc------cccceEECCcchheeec
Confidence            1  1 22338899999999977765543        457777766 44433332222      27899999999877655


Q ss_pred             -c-CCeEEEEEecCCce----ee---EecC-CCceeEEEeecCce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482         164 -I-QNKAVVFSVEKAGV----LQ---TLKS-ESKVHSVCFLNETT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGL  232 (327)
Q Consensus       164 -~-~~~i~i~d~~~~~~----~~---~~~~-~~~i~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  232 (327)
                       + .+.|..|++.....    ..   .+.. .+....+++..++. .++....+.|.++|.+ ++.+..+......++++
T Consensus       152 ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~  230 (246)
T PF08450_consen  152 DSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNC  230 (246)
T ss_dssp             ETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEE
T ss_pred             ccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEE
Confidence             3 78899999864321    12   2222 23588899999854 4455578899999987 88888887765688999


Q ss_pred             EEEecCCCcEEEE
Q psy7482         233 VFFSIPQETTVCT  245 (327)
Q Consensus       233 ~~~~s~~~~~l~~  245 (327)
                      +|- .++.+.|+.
T Consensus       231 ~fg-g~~~~~L~v  242 (246)
T PF08450_consen  231 AFG-GPDGKTLYV  242 (246)
T ss_dssp             EEE-STTSSEEEE
T ss_pred             EEE-CCCCCEEEE
Confidence            995 256555543

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG4714|consensus

Probab=99.29  E-value=1.1e-10  Score=86.54  Aligned_cols=240  Identities=14%  Similarity=0.146  Sum_probs=143.0

Q ss_pred             ccccccc-cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE-----------ecccCCceeeEEEecCCCEEEEE
Q psy7482          49 ALMQHEG-TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK-----------KAHKGTAVNHISIHPSGKLALSV  116 (327)
Q Consensus        49 ~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-----------~~~~~~~v~~~~~~~~~~~l~~~  116 (327)
                      .+.+|.+ .++.+.+.. ...|+++..++.+.......+.+.....           ..+.+. -.+-+.+-.++.++++
T Consensus        30 ~i~~~~d~~~~~~~~v~-~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep-~p~~~~s~~~t~V~~~  107 (319)
T KOG4714|consen   30 EIMQHADVKLSKVSLSA-EYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEI-DPNDACTMTDNRVCIG  107 (319)
T ss_pred             hcccccceEEEEeechh-hheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCC-CCcccccccCCceEec
Confidence            3334433 356666653 3467777777777666554433322221           122221 1111222235679999


Q ss_pred             eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC------CeEEEEEecCCceeeE-ecCCCcee
Q psy7482         117 GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ------NKAVVFSVEKAGVLQT-LKSESKVH  189 (327)
Q Consensus       117 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------~~i~i~d~~~~~~~~~-~~~~~~i~  189 (327)
                      ..||.+.+++.+.-.... .+.+..  +. .-.+.+.-..++++.++.-      +..+.|+++..+.+.. .+....+.
T Consensus       108 ~~dg~~~v~s~~~~~~~~-~~i~~~--~~-~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~  183 (319)
T KOG4714|consen  108 YADGSLAVFSTDKDLALM-SRIPSI--HS-GSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVT  183 (319)
T ss_pred             CCCceEEEEechHHHhhh-hhcccc--cc-cccccceeecccEEecCCcceEeeccceeeecccccccccccccccccch
Confidence            999999999977521110 011110  00 0122233334555555543      4455666554332221 22334599


Q ss_pred             EEEeecC--ceEEEeCCCCcEEEEEcCCCce-eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE--
Q psy7482         190 SVCFLNE--TTVCTGNEESAITAYNLTDGSH-LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW--  264 (327)
Q Consensus       190 ~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~--  264 (327)
                      +++-+|.  ..+++|+.||.+-+||.++... ...++.|+.++..+-|+| .++..|+++++||.+.-||..+ +.+.  
T Consensus       184 ~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHp-k~p~~Lft~sedGslw~wdas~-~~l~i~  261 (319)
T KOG4714|consen  184 ALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHP-KNPEHLFTCSEDGSLWHWDAST-TFLSIS  261 (319)
T ss_pred             hhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccC-CCchheeEecCCCcEEEEcCCC-ceEEec
Confidence            9999986  7788999999999999998754 445689999999999997 8899999999999999999763 2111  


Q ss_pred             ----------------E---e----ecccCceEEEeeeCcEEEEEecCCcEEEEE
Q psy7482         265 ----------------H---I----KASASRIKGLASHRNHLICITSAGDLVVWE  296 (327)
Q Consensus       265 ----------------~---~----~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~  296 (327)
                                      .   +    ......|+++......|++|++-+.|++++
T Consensus       262 ~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~SinsfDV~g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  262 NQASVISSWLSGDPVKSRIEITSLLPSRSLSINSFDVLGPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             CccccccccccCCcccceEeeeccccccceeeeeeeccCceEEeccccceEEEec
Confidence                            0   0    011123444444457888888888888765

>KOG4532|consensus

Probab=99.27  E-value=2.2e-09  Score=80.22  Aligned_cols=156  Identities=13%  Similarity=0.038  Sum_probs=113.1

Q ss_pred             EEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC-e-EEEeEEecccCCceeeE
Q psy7482          27 AASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-Q-LEKLFKKAHKGTAVNHI  104 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~-~~~~~~~~~~~~~v~~~  104 (327)
                      +..++.|.++++.+++-+..........-.+.++++++|++++++.+....|..|.+... + .+........+. -.+.
T Consensus       131 ~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~-gF~~  209 (344)
T KOG4532|consen  131 LNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDH-GFYN  209 (344)
T ss_pred             eeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCC-ceee
Confidence            445677888888877654433333222234889999999999999999999999988543 2 233231233333 6778


Q ss_pred             EEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc--EEEeec-CCeEEEEEecCCceeeE
Q psy7482         105 SIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL--LYAIPI-QNKAVVFSVEKAGVLQT  181 (327)
Q Consensus       105 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~-~~~i~i~d~~~~~~~~~  181 (327)
                      .|+.....+|++..||++.|||++...............|.+.++.+.|++.|.  +|.... -+.+.+.|+++++..+.
T Consensus       210 S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~  289 (344)
T KOG4532|consen  210 SFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQV  289 (344)
T ss_pred             eeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeE
Confidence            999999999999999999999999876655554555556788899999998663  444443 78899999999887665


Q ss_pred             ec
Q psy7482         182 LK  183 (327)
Q Consensus       182 ~~  183 (327)
                      +.
T Consensus       290 I~  291 (344)
T KOG4532|consen  290 IV  291 (344)
T ss_pred             Ee
Confidence            54

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.27  E-value=1.4e-08  Score=76.95  Aligned_cols=207  Identities=12%  Similarity=0.148  Sum_probs=130.0

Q ss_pred             EEECCCCCeEEEecCCCcEEEEEcCCC--eEEEeEE-ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeee
Q psy7482          60 LKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT  136 (327)
Q Consensus        60 ~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  136 (327)
                      ++.+++|+.||.-- |..|.|=..+..  ..+.... .....+.-+.++|+||+.+||.+...|+|+++|+.. ..+..+
T Consensus         3 ~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I   80 (282)
T PF15492_consen    3 LALSSDGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVI   80 (282)
T ss_pred             eeecCCCcEEEEEe-ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEc
Confidence            56677888777654 556666544331  1222221 111222367899999999999999999999999875 333333


Q ss_pred             ecccc--CccccceEEEEEccCC-------cEEEeecCCeEEEEEecC-----CceeeEec----CCCceeEEEeecC-c
Q psy7482         137 NLSSY--GVGFENLDSVVWSPEG-------LLYAIPIQNKAVVFSVEK-----AGVLQTLK----SESKVHSVCFLNE-T  197 (327)
Q Consensus       137 ~~~~~--~~~~~~v~~~~~~~~~-------~~l~~~~~~~i~i~d~~~-----~~~~~~~~----~~~~i~~~~~~~~-~  197 (327)
                      +....  ..-...|..+.|-+..       ++++....|.++-|-+..     .+....+.    ....|.++.++|. +
T Consensus        81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~  160 (282)
T PF15492_consen   81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHR  160 (282)
T ss_pred             CcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCC
Confidence            32221  1122457777776532       567777788887776532     23334443    4678999999998 7


Q ss_pred             eEEEeCCC-C----------cEEEEEcCCCceeE-----------------------E---e---eecccceEEEEEEec
Q psy7482         198 TVCTGNEE-S----------AITAYNLTDGSHLW-----------------------Q---I---KASASRIKGLVFFSI  237 (327)
Q Consensus       198 ~l~~~~~d-~----------~i~i~d~~~~~~~~-----------------------~---~---~~~~~~v~~~~~~~s  237 (327)
                      +|++|+.. .          -+..|.+-++.+-.                       .   +   ......|..|..  |
T Consensus       161 LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSl--S  238 (282)
T PF15492_consen  161 LLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSL--S  238 (282)
T ss_pred             EEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEE--C
Confidence            77766532 1          25566654332100                       0   0   112345777777  5


Q ss_pred             CCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         238 PQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      |||..|++...+|.|.+|++.+-++......++
T Consensus       239 Pdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e  271 (282)
T PF15492_consen  239 PDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE  271 (282)
T ss_pred             CCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence            999999999999999999998887766665443

>KOG2695|consensus

Probab=99.25  E-value=7.9e-11  Score=90.81  Aligned_cols=160  Identities=16%  Similarity=0.150  Sum_probs=124.5

Q ss_pred             EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC-----ceeeEecCCCc
Q psy7482         114 LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA-----GVLQTLKSESK  187 (327)
Q Consensus       114 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~-----~~~~~~~~~~~  187 (327)
                      ++.+.+-.+-+-|+++|...... ..      ..|.++.|...++++..|. +|.|..+|++..     .+...+-|.+.
T Consensus       228 fs~G~sqqv~L~nvetg~~qsf~-sk------sDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ss  300 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQSFQ-SK------SDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSS  300 (425)
T ss_pred             ecccccceeEEEEeecccccccc-cc------hhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcc
Confidence            55666778899999887653222 22      2388899998888888887 999999999864     46667779999


Q ss_pred             eeEEEeec-C-ceEEEeCCCCcEEEEEcCCCce---eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         188 VHSVCFLN-E-TTVCTGNEESAITAYNLTDGSH---LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       188 i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      |+++.... + .+|++.+.+|+|++||++--++   +.++.+|...-.-+-++-.+....+++++.|...+||.++.+.+
T Consensus       301 vtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghL  380 (425)
T KOG2695|consen  301 VTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHL  380 (425)
T ss_pred             hhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCce
Confidence            99998876 3 7899999999999999987777   88899997655555444347788899999999999999999999


Q ss_pred             eEEeeccc----CceEEEeeeC
Q psy7482         263 LWHIKASA----SRIKGLASHR  280 (327)
Q Consensus       263 ~~~~~~~~----~~v~~~~~~~  280 (327)
                      +.++.-..    ..+.+++|..
T Consensus       381 l~tipf~~s~~e~d~~sv~~~s  402 (425)
T KOG2695|consen  381 LCTIPFPYSASEVDIPSVAFDS  402 (425)
T ss_pred             eeccCCCCccccccccceehhc
Confidence            88876443    3455666654

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=99.24  E-value=5.7e-08  Score=83.85  Aligned_cols=269  Identities=10%  Similarity=0.110  Sum_probs=166.5

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccc------cEE--EEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEG------TIT--CLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~------~v~--~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      .+..++.++.++.|.-.|..+++.+..+.....      .+.  .+... ++..++.++.++.|.-+|.++|+.+..+..
T Consensus        60 ~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~  138 (488)
T cd00216          60 VDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGN  138 (488)
T ss_pred             ECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecC
Confidence            455666777789999999999988876653222      010  01111 226788888999999999999998887732


Q ss_pred             cccC-C--ce-eeEEEecCCCEEEEEe---------CCCCEEEEEcCCCceeeeeeccccCccc---------------c
Q psy7482          95 AHKG-T--AV-NHISIHPSGKLALSVG---------KDKTLRTWNLVKGRSAYITNLSSYGVGF---------------E  146 (327)
Q Consensus        95 ~~~~-~--~v-~~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~---------------~  146 (327)
                      .... .  .+ ....+.  +..++.++         .+|.+..+|..+|+.+............               .
T Consensus       139 ~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~  216 (488)
T cd00216         139 NDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGG  216 (488)
T ss_pred             CCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCC
Confidence            2210 0  01 111222  24455554         3678999999999988877653210000               0


Q ss_pred             ce-EEEEEccCCcEEEeec-CC------------------eEEEEEecCCceeeEecCC-Cce------eEEEee----c
Q psy7482         147 NL-DSVVWSPEGLLYAIPI-QN------------------KAVVFSVEKAGVLQTLKSE-SKV------HSVCFL----N  195 (327)
Q Consensus       147 ~v-~~~~~~~~~~~l~~~~-~~------------------~i~i~d~~~~~~~~~~~~~-~~i------~~~~~~----~  195 (327)
                      .+ ...++.+.+..+.++. ++                  .+.-+|..+++....++.. ...      ....+.    -
T Consensus       217 ~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~  296 (488)
T cd00216         217 TSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPK  296 (488)
T ss_pred             CccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEecccc
Confidence            01 1234454455555554 44                  7999999999998887621 110      001111    1


Q ss_pred             C----ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEE------------------ecCCCeEE
Q psy7482         196 E----TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCT------------------GNEESAIT  253 (327)
Q Consensus       196 ~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~------------------~~~d~~i~  253 (327)
                      +    ..+++++.+|.+..+|.++++.+........   .++.  +|  ..+..                  ...+|.+.
T Consensus       297 ~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~---~~~~--~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~  369 (488)
T cd00216         297 DGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQ---PMAY--DP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLA  369 (488)
T ss_pred             CCCeeEEEEEECCCceEEEEECCCCcEeeEeEeecc---cccc--CC--ceEEEccccccccCcccccCCCCCCCceEEE
Confidence            1    2578888999999999999999887653211   1222  13  22222                  22468899


Q ss_pred             EEEcCCCceeEEeeccc--------Cce--EEEeeeCcEEEEEecCCcEEEEEccCcc
Q psy7482         254 AYNLTDGSHLWHIKASA--------SRI--KGLASHRNHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       254 i~d~~~~~~~~~~~~~~--------~~v--~~~~~~~~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      -.|+.+|+.+++.....        .+.  ..+......|+.++.||.|+.+|..++.
T Consensus       370 AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~  427 (488)
T cd00216         370 ALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGK  427 (488)
T ss_pred             EEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCc
Confidence            99999999988876441        111  1233444889999999999999998883

The alignment model contains an 8-bladed beta-propeller.

>KOG2066|consensus

Probab=99.22  E-value=1.2e-09  Score=93.29  Aligned_cols=183  Identities=18%  Similarity=0.200  Sum_probs=135.8

Q ss_pred             CccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482          14 TASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        14 ~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      .+.+.|+++.+++|+-|..+|.|++.+.+ +.+ .+...|...      ..+|.++++|+.||+|.|-.+.+.+....+ 
T Consensus        39 ~D~is~~av~~~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~-  109 (846)
T KOG2066|consen   39 NDAISCCAVHDKFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQY-  109 (846)
T ss_pred             hhHHHHHHhhcceeeeccccceEEEEecC-Ccc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeE-
Confidence            45677888899999999999999999975 443 444445544      557999999999999999999888877766 


Q ss_pred             ecccCCceeeEEEecC-----CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeE
Q psy7482          94 KAHKGTAVNHISIHPS-----GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKA  168 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i  168 (327)
                      ..  ..|+.+++++|+     .+.+++|+.-| +.++.-+--........   ....++|.++.|.  |+++|-++|-.+
T Consensus       110 df--~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l---~~~eG~I~~i~W~--g~lIAWand~Gv  181 (846)
T KOG2066|consen  110 DF--KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVL---SEGEGPIHSIKWR--GNLIAWANDDGV  181 (846)
T ss_pred             ec--CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceee---ecCccceEEEEec--CcEEEEecCCCc
Confidence            22  234999999997     56899999888 77775321111111111   2224569999997  789999999999


Q ss_pred             EEEEecCCceeeEecCC-------CceeEEEeecCceEEEeCCCCcEEEEEcC
Q psy7482         169 VVFSVEKAGVLQTLKSE-------SKVHSVCFLNETTVCTGNEESAITAYNLT  214 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~~~-------~~i~~~~~~~~~~l~~~~~d~~i~i~d~~  214 (327)
                      ++||..+.+.+..++.+       .....+.|.++..++.|-.| +|++..++
T Consensus       182 ~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~d-~v~i~~I~  233 (846)
T KOG2066|consen  182 KVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWGD-SVKICSIK  233 (846)
T ss_pred             EEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEEecCC-eEEEEEEe
Confidence            99999999888877621       23456788888788877655 68888877

>KOG4649|consensus

Probab=99.22  E-value=1.1e-07  Score=71.14  Aligned_cols=259  Identities=10%  Similarity=0.056  Sum_probs=138.8

Q ss_pred             CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceee
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH  103 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~  103 (327)
                      |++++.|+..|.+++.+.++|+....+..-..-=......+++..+..|+.|++.+..|..+...+... +..... ..+
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyks-kcgG~~-f~s  140 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKS-KCGGGT-FVS  140 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEec-ccCCce-ecc
Confidence            457888999999999999999887776643322122345668999999999999999999988777665 222222 333


Q ss_pred             EEEecCCCEEEEEeCCCCEEEEEcCCCce--eeeeeccccCccccceEE--EEEccCCcEEEee-cCCeEEEEEecCCce
Q psy7482         104 ISIHPSGKLALSVGKDKTLRTWNLVKGRS--AYITNLSSYGVGFENLDS--VVWSPEGLLYAIP-IQNKAVVFSVEKAGV  178 (327)
Q Consensus       104 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~-~~~~i~i~d~~~~~~  178 (327)
                      -+..|-...|+.+...|.+.--..+....  ........      ++.+  ++.   +..+..+ -||.+.-+| ..|+.
T Consensus       141 P~i~~g~~sly~a~t~G~vlavt~~~~~~~~~w~~~~~~------PiF~splcv---~~sv~i~~VdG~l~~f~-~sG~q  210 (354)
T KOG4649|consen  141 PVIAPGDGSLYAAITAGAVLAVTKNPYSSTEFWAATRFG------PIFASPLCV---GSSVIITTVDGVLTSFD-ESGRQ  210 (354)
T ss_pred             ceecCCCceEEEEeccceEEEEccCCCCcceehhhhcCC------ccccCceec---cceEEEEEeccEEEEEc-CCCcE
Confidence            45556333455555556665555444311  11111111      1111  111   1222222 266666665 44555


Q ss_pred             eeEecCCCceeE-EEee-cC-ceEEEeCCCC--------cEEEEEcCCCceeEEeeecccceEEEEEEecCC---CcEEE
Q psy7482         179 LQTLKSESKVHS-VCFL-NE-TTVCTGNEES--------AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQ---ETTVC  244 (327)
Q Consensus       179 ~~~~~~~~~i~~-~~~~-~~-~~l~~~~~d~--------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~---~~~l~  244 (327)
                      +..+...++|.. -+-+ |. +.+..+.++-        .-.+|..+.+...+.+...   -....++ ++.   .++|.
T Consensus       211 vwr~~t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL~w~~~~g~t~~vy~~p---~l~F~~h-~~~~S~~~ll~  286 (354)
T KOG4649|consen  211 VWRPATKGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHLLWATQSGTTLHVYLSP---KLRFDLH-SPGISYPKLLR  286 (354)
T ss_pred             EEeecCCCceecccccCCCcceEEEEecCCeEEEeccccceEEEEecCCcEEEEEeCc---ccceecc-CCCCcchhhhh
Confidence            555444444321 1111 22 3333333332        2334555555333222111   1112222 122   45778


Q ss_pred             EecCCCeEEEEEcCCCceeEEeecccCceEEEe--------e-eC----cEEEEEecCCcEEEEEccCc
Q psy7482         245 TGNEESAITAYNLTDGSHLWHIKASASRIKGLA--------S-HR----NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       245 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~--------~-~~----~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .++.||.+.|.-.+.  .+.+...|.+.+..+.        | +|    .+|+.|+.|..|+-||+.+.
T Consensus       287 ~~s~dgkv~il~~~~--sl~~~~s~~g~lq~~~~~el~~eIFsSPvii~grl~igcRDdYv~cldl~~~  353 (354)
T KOG4649|consen  287 RSSGDGKVMILMTSK--SLAEISSNGGELQNLEAIELSNEIFSSPVIIDGRLLIGCRDDYVRCLDLDTW  353 (354)
T ss_pred             hhcCCCcEEEEEecc--cccccccCCCccceEEEeecCcccccCCeEEccEEEEEEccCeEEEEecccc
Confidence            888999988874322  2333333433322222        2 33    78899999999999999764

>KOG4649|consensus

Probab=99.20  E-value=7.2e-08  Score=72.19  Aligned_cols=260  Identities=14%  Similarity=0.142  Sum_probs=145.1

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCcee
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN  102 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  102 (327)
                      ...+++.|+..+.+.--|.++|+....-. -...+.+-+.- -|++++.|+..|.+++.+.++|.....+ .....-.+.
T Consensus        22 skT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f-~~~~~vk~~   98 (354)
T KOG4649|consen   22 SKTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNF-VILETVKVR   98 (354)
T ss_pred             CceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeee-eehhhhccc
Confidence            34678889999999999999998765432 12223322222 3778999999999999999999887777 332221122


Q ss_pred             eEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEeecCCeEEEEEecCC--cee
Q psy7482         103 HISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPIQNKAVVFSVEKA--GVL  179 (327)
Q Consensus       103 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~i~d~~~~--~~~  179 (327)
                       ....+++..+..++.|++.+..|.++..++...+.....     ..+-+..| ++.++++...|.+.--....+  ..+
T Consensus        99 -a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~-----f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~~~  172 (354)
T KOG4649|consen   99 -AQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGT-----FVSPVIAPGDGSLYAAITAGAVLAVTKNPYSSTEF  172 (354)
T ss_pred             -eEEcCCCceEEEecCCCcEEEecccccceEEecccCCce-----eccceecCCCceEEEEeccceEEEEccCCCCccee
Confidence             345678999999999999999999988887765444431     33445556 566666666666655544443  222


Q ss_pred             eEecCCCceeE--EEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC-------
Q psy7482         180 QTLKSESKVHS--VCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES-------  250 (327)
Q Consensus       180 ~~~~~~~~i~~--~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~-------  250 (327)
                      ......+++.+  ++..  ..+..+.-||.+.-+| ..|++++.+. ..++|..--....|..+.+..+..+.       
T Consensus       173 w~~~~~~PiF~splcv~--~sv~i~~VdG~l~~f~-~sG~qvwr~~-t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~  248 (354)
T KOG4649|consen  173 WAATRFGPIFASPLCVG--SSVIITTVDGVLTSFD-ESGRQVWRPA-TKGPIFMEPCESRPSCQQISLENENCFCAPLPI  248 (354)
T ss_pred             hhhhcCCccccCceecc--ceEEEEEeccEEEEEc-CCCcEEEeec-CCCceecccccCCCcceEEEEecCCeEEEeccc
Confidence            22222333322  1111  2344445566665555 4455544332 22222111000002223333333333       


Q ss_pred             -eEEEEEcCCCceeEEeecccCceEEEeee------CcEEEEEecCCcEEEEEcc
Q psy7482         251 -AITAYNLTDGSHLWHIKASASRIKGLASH------RNHLICITSAGDLVVWELN  298 (327)
Q Consensus       251 -~i~i~d~~~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~dg~v~iw~~~  298 (327)
                       .-.+|..++|.........   -...+++      |++|..++.||++.|-...
T Consensus       249 ~ghL~w~~~~g~t~~vy~~p---~l~F~~h~~~~S~~~ll~~~s~dgkv~il~~~  300 (354)
T KOG4649|consen  249 AGHLLWATQSGTTLHVYLSP---KLRFDLHSPGISYPKLLRRSSGDGKVMILMTS  300 (354)
T ss_pred             cceEEEEecCCcEEEEEeCc---ccceeccCCCCcchhhhhhhcCCCcEEEEEec
Confidence             2335555555322222111   0112222      2778888999999887443

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.17  E-value=7.1e-08  Score=81.20  Aligned_cols=208  Identities=12%  Similarity=0.051  Sum_probs=125.3

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCE-EEEEeC---CCCEEEEEcCCCceeeeeeccccCccccceEEE
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKL-ALSVGK---DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSV  151 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  151 (327)
                      ..|.+-|....+ .+.+ ... +. .....|+|||+. ++..+.   +..|.++|+.+++..........      ....
T Consensus       169 ~~l~~~d~dg~~-~~~~-~~~-~~-~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~------~~~~  238 (419)
T PRK04043        169 SNIVLADYTLTY-QKVI-VKG-GL-NIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGM------LVVS  238 (419)
T ss_pred             ceEEEECCCCCc-eeEE-ccC-CC-eEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCc------EEee
Confidence            456665665443 3333 222 23 788999999984 554443   35699999988877665543332      5567


Q ss_pred             EEccCCcEEEeec----CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC-CCC--cEEEEEcCCCceeEEee
Q psy7482         152 VWSPEGLLYAIPI----QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN-EES--AITAYNLTDGSHLWQIK  223 (327)
Q Consensus       152 ~~~~~~~~l~~~~----~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~d~--~i~i~d~~~~~~~~~~~  223 (327)
                      .|+|||+.++...    +..|.++|+.+++...............|+|| +.++..+ ..+  .|+++|+.+++..+...
T Consensus       239 ~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~  318 (419)
T PRK04043        239 DVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF  318 (419)
T ss_pred             EECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc
Confidence            8999998776543    45788889887764433334433455689999 4444433 333  57788887776533222


Q ss_pred             ecccceEEEEEEecCCCcEEEEecCC---------CeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEec-CCc
Q psy7482         224 ASASRIKGLVFFSIPQETTVCTGNEE---------SAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITS-AGD  291 (327)
Q Consensus       224 ~~~~~v~~~~~~~s~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-dg~  291 (327)
                      . ..  ....|  +|+|++++..+..         ..|.+.|+.++... .+... .......|+|  +.|+..+. .+.
T Consensus       319 ~-g~--~~~~~--SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~  391 (419)
T PRK04043        319 H-GK--NNSSV--STYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTAN-GVNQFPRFSSDGGSIMFIKYLGNQ  391 (419)
T ss_pred             C-CC--cCceE--CCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCC-CCcCCeEECCCCCEEEEEEccCCc
Confidence            1 11  12366  5999988765543         36888898877643 33322 2233578999  55544443 333


Q ss_pred             --EEEEEccCc
Q psy7482         292 --LVVWELNED  300 (327)
Q Consensus       292 --v~iw~~~~~  300 (327)
                        +.+.+++..
T Consensus       392 ~~L~~~~l~g~  402 (419)
T PRK04043        392 SALGIIRLNYN  402 (419)
T ss_pred             EEEEEEecCCC
Confidence              555666554

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=99.16  E-value=2.8e-07  Score=79.63  Aligned_cols=237  Identities=13%  Similarity=0.169  Sum_probs=148.3

Q ss_pred             CEEEEecCCCeEEEEEcccccccccccccccc--EEEEEECC--CCCeEEEec---------CCCcEEEEEcCCCeEEEe
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGALMQHEGT--ITCLKFTP--EGSHLISCS---------DDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~--v~~~~~~~--~~~~l~~~~---------~d~~i~iw~~~~~~~~~~   91 (327)
                      ..++.++.+|.|+-+|.++|+.+..+......  -..+.-+|  .+..++.++         .++.+..+|..+|+....
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~  190 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWR  190 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeE
Confidence            67778888999999999999988766532221  00111122  124455554         367899999999998877


Q ss_pred             EEecccC------------------Cce-eeEEEecCCCEEEEEeCCC------------------CEEEEEcCCCceee
Q psy7482          92 FKKAHKG------------------TAV-NHISIHPSGKLALSVGKDK------------------TLRTWNLVKGRSAY  134 (327)
Q Consensus        92 ~~~~~~~------------------~~v-~~~~~~~~~~~l~~~~~dg------------------~i~iwd~~~~~~~~  134 (327)
                      +......                  ..+ ...++.+.+..++.++.++                  .|.-+|.++|+...
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W  270 (488)
T cd00216         191 FYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKW  270 (488)
T ss_pred             eeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEE
Confidence            6332211                  001 1234444566777777655                  79999999999988


Q ss_pred             eeeccccCc-----cccc-eEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEe--
Q psy7482         135 ITNLSSYGV-----GFEN-LDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTG--  202 (327)
Q Consensus       135 ~~~~~~~~~-----~~~~-v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~--  202 (327)
                      .........     ...+ +..+. .-++.   .++++. +|.+..+|.++++.+......  ...++.+| +.+..+  
T Consensus       271 ~~~~~~~~~~~~~~~s~p~~~~~~-~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~--~~~~~~~~-~~vyv~~~  346 (488)
T cd00216         271 FYQTTPHDLWDYDGPNQPSLADIK-PKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV--EQPMAYDP-GLVYLGAF  346 (488)
T ss_pred             EeeCCCCCCcccccCCCCeEEecc-ccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee--ccccccCC-ceEEEccc
Confidence            775443210     0000 11110 11332   455554 899999999999998876522  11123334 333322  


Q ss_pred             ----------------CCCCcEEEEEcCCCceeEEeeecc--------cce--EEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482         203 ----------------NEESAITAYNLTDGSHLWQIKASA--------SRI--KGLVFFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       203 ----------------~~d~~i~i~d~~~~~~~~~~~~~~--------~~v--~~~~~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                                      ..+|.+.-.|..+++.+.+.....        .+.  ..+.    ..+..++.++.||.++.+|
T Consensus       347 ~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~----~~g~~v~~g~~dG~l~ald  422 (488)
T cd00216         347 HIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLA----TAGNLVFAGAADGYFRAFD  422 (488)
T ss_pred             cccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceE----ecCCeEEEECCCCeEEEEE
Confidence                            246889999999999888765431        111  1122    3567888899999999999


Q ss_pred             cCCCceeEEeecc
Q psy7482         257 LTDGSHLWHIKAS  269 (327)
Q Consensus       257 ~~~~~~~~~~~~~  269 (327)
                      .++|+.+.+.+..
T Consensus       423 ~~tG~~lW~~~~~  435 (488)
T cd00216         423 ATTGKELWKFRTP  435 (488)
T ss_pred             CCCCceeeEEECC
Confidence            9999999888753

The alignment model contains an 8-bladed beta-propeller.

>KOG1645|consensus

Probab=99.14  E-value=9.4e-09  Score=81.20  Aligned_cols=255  Identities=10%  Similarity=0.084  Sum_probs=153.7

Q ss_pred             EEEEEccccccccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC-CCEE
Q psy7482          36 VVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS-GKLA  113 (327)
Q Consensus        36 v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l  113 (327)
                      |+..+..+.+..+.+..|...|..++|+|..+ ++..++.+..|+|.|+++......+ ..+ .. +++++|.-| .+++
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy-~a~-~~-~wSC~wDlde~h~I  251 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSY-IAY-NQ-IWSCCWDLDERHVI  251 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehe-ecc-CC-ceeeeeccCCccee
Confidence            56666666666677778888999999999776 7888999999999999998888887 555 44 999999885 4678


Q ss_pred             EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc------CCcEEEeecCCeEEEEEecC----CceeeEec
Q psy7482         114 LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP------EGLLYAIPIQNKAVVFSVEK----AGVLQTLK  183 (327)
Q Consensus       114 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~~~i~i~d~~~----~~~~~~~~  183 (327)
                      +.|...|.|.+||++..+..........  ...+|..++.-+      .+.+++... -.+..|+...    ..++..++
T Consensus       252 YaGl~nG~VlvyD~R~~~~~~~e~~a~~--t~~pv~~i~~~~~n~~f~~gglLv~~l-t~l~f~ei~~s~~~~p~vlele  328 (463)
T KOG1645|consen  252 YAGLQNGMVLVYDMRQPEGPLMELVANV--TINPVHKIAPVQPNKIFTSGGLLVFAL-TVLQFYEIVFSAECLPCVLELE  328 (463)
T ss_pred             EEeccCceEEEEEccCCCchHhhhhhhh--ccCcceeecccCccccccccceEEeee-hhhhhhhhhccccCCCcccccC
Confidence            8888899999999987654322211111  122344444333      233333332 2233444321    22223333


Q ss_pred             CCCceeEEEeecC--ceEEEeCCCCc------EE-EEEcCCCceeEEe-eeccc-c-----eEEEEEEecCCCcEEE-Ee
Q psy7482         184 SESKVHSVCFLNE--TTVCTGNEESA------IT-AYNLTDGSHLWQI-KASAS-R-----IKGLVFFSIPQETTVC-TG  246 (327)
Q Consensus       184 ~~~~i~~~~~~~~--~~l~~~~~d~~------i~-i~d~~~~~~~~~~-~~~~~-~-----v~~~~~~~s~~~~~l~-~~  246 (327)
                      ..+...++++.+-  ..+++.-.+..      +- --|..+|.++... .++.+ +     -+...+. .++..+++ .+
T Consensus       329 ~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~-~~~nn~iv~~g  407 (463)
T KOG1645|consen  329 PPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRA-VEDNNYIVVVG  407 (463)
T ss_pred             CCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceec-cccccEEEEec
Confidence            4566666666663  33444332211      10 1122233333221 11101 0     0111121 25556555 45


Q ss_pred             cCCCeEEEEEcCCCceeEEeecccCceEEEeeeC----cEEEEEecCCcEEEEEccC
Q psy7482         247 NEESAITAYNLTDGSHLWHIKASASRIKGLASHR----NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       247 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~v~iw~~~~  299 (327)
                      ...+.+.+||..+.+.+.++.-. .+|.+++...    .+|++-. |..++||..+.
T Consensus       408 d~tn~lil~D~~s~evvQ~l~~~-epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~es  462 (463)
T KOG1645|consen  408 DSTNELILQDPHSFEVVQTLALS-EPVLDICPNDTNGSSYLALLT-DDRVHIYKNES  462 (463)
T ss_pred             CCcceeEEeccchhheeeecccC-cceeecceeecCCcchhhhee-cceEEEEecCC
Confidence            55688999999999999988765 6888888766    5666665 56788877543

>KOG0882|consensus

Probab=99.13  E-value=4.6e-09  Score=84.11  Aligned_cols=247  Identities=15%  Similarity=0.136  Sum_probs=170.1

Q ss_pred             CCccEEEEEe-CCCEEEEecCCCeEEEEEccc--c-ccccccccccccEEEEEECCCCCeEEEecC-CCcEEEEEcCCCe
Q psy7482          13 HTASVRSVAA-TSKLAASSGADETVVLYDMVK--R-KQSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQ   87 (327)
Q Consensus        13 h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~--~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~   87 (327)
                      |.+.|+.+.. ..+++.+++.||.++.|.-..  + +.+..+..|...|.+++.+-++.++.+.+. |..++++|+++..
T Consensus         8 hrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~D   87 (558)
T KOG0882|consen    8 HRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFD   87 (558)
T ss_pred             ccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccc
Confidence            8888888888 889999999999999998543  1 344556678999999999999999999887 9999999998876


Q ss_pred             EEEeEEecccCCceeeEEEecCC-C-EEEE-EeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSG-K-LALS-VGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~-~-~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      .+..++...... ..+...++.. . .++. .-.+|.+.++|-....+....   ....|..+|..+.+.+.+..+.+..
T Consensus        88 minmiKL~~lPg-~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~---fkklH~sPV~~i~y~qa~Ds~vSiD  163 (558)
T KOG0882|consen   88 MINMIKLVDLPG-FAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGY---FKKLHFSPVKKIRYNQAGDSAVSID  163 (558)
T ss_pred             hhhhcccccCCC-ceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccce---ecccccCceEEEEeeccccceeecc
Confidence            664442222222 2222223321 1 3333 345789999997655432222   1234467799999999998888876


Q ss_pred             -CCeEEEEEecC------CceeeEec----------CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee--
Q psy7482         165 -QNKAVVFSVEK------AGVLQTLK----------SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA--  224 (327)
Q Consensus       165 -~~~i~i~d~~~------~~~~~~~~----------~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~--  224 (327)
                       .|-|..|..+.      .+....++          ......++.|+|+ ..+.+-+.|..|+++++++++.++.+..  
T Consensus       164 ~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~  243 (558)
T KOG0882|consen  164 ISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVL  243 (558)
T ss_pred             ccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccc
Confidence             89999998762      11222222          3567889999999 6788888999999999998865443321  


Q ss_pred             ------------------------------ccc-ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe
Q psy7482         225 ------------------------------SAS-RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI  266 (327)
Q Consensus       225 ------------------------------~~~-~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  266 (327)
                                                    |.. .-+.+.|  +..+++|+-|+-=| |++.++.+++..+.+
T Consensus       244 t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~f--des~~flly~t~~g-ikvin~~tn~v~ri~  313 (558)
T KOG0882|consen  244 TDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVF--DESGNFLLYGTILG-IKVINLDTNTVVRIL  313 (558)
T ss_pred             hhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEE--cCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence                                          111 1233445  36778887776543 788888887765544

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=99.11  E-value=5.6e-07  Score=70.47  Aligned_cols=223  Identities=13%  Similarity=0.169  Sum_probs=145.4

Q ss_pred             EEEEEECC-CCCeEEEecCCCc-EEEEEcCCCeEEEeEEecccCC-ceeeEEEecCCCEEEEEeC-----CCCEEEEEcC
Q psy7482          57 ITCLKFTP-EGSHLISCSDDGS-IAIFRVGSWQLEKLFKKAHKGT-AVNHISIHPSGKLALSVGK-----DKTLRTWNLV  128 (327)
Q Consensus        57 v~~~~~~~-~~~~l~~~~~d~~-i~iw~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~  128 (327)
                      ...++.+| ....++.+-.-|+ ..+||..+++....+ ....+. --=.-.|++||++|++.-.     .|.|-+||..
T Consensus         7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~-~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~   85 (305)
T PF07433_consen    7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRL-WAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA   85 (305)
T ss_pred             ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEE-cCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence            45677888 5556667766665 678999999988877 333222 1224689999999998743     4789999998


Q ss_pred             -CCceeeeeeccccCccccceEEEEEccCCcEEEeecC-------------------CeEEEEEecCCceeeEec-----
Q psy7482         129 -KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ-------------------NKAVVFSVEKAGVLQTLK-----  183 (327)
Q Consensus       129 -~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------------~~i~i~d~~~~~~~~~~~-----  183 (327)
                       +-+.+..+......     ...+.+.||++.|+++..                   .++...|..+|+.+.+..     
T Consensus        86 ~~~~ri~E~~s~GIG-----PHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~  160 (305)
T PF07433_consen   86 RGYRRIGEFPSHGIG-----PHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDL  160 (305)
T ss_pred             CCcEEEeEecCCCcC-----hhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccc
Confidence             33443344333332     557889999977777532                   146667788888877743     


Q ss_pred             CCCceeEEEeecCceEEEeCCC-C-------cEEEEEcCCCceeEEee-------ecccceEEEEEEecCCCcEEE-Eec
Q psy7482         184 SESKVHSVCFLNETTVCTGNEE-S-------AITAYNLTDGSHLWQIK-------ASASRIKGLVFFSIPQETTVC-TGN  247 (327)
Q Consensus       184 ~~~~i~~~~~~~~~~l~~~~~d-~-------~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~s~~~~~l~-~~~  247 (327)
                      +...+.-+++.+++.++.+... |       -+-+++  .++.+..+.       .-.+.+-+|++.  +++..++ |+-
T Consensus       161 ~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~--~~g~~ia~tsP  236 (305)
T PF07433_consen  161 HQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAAD--RDGRLIAVTSP  236 (305)
T ss_pred             cccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEe--CCCCEEEEECC
Confidence            4567999999998777666421 1       133333  233232222       223568899995  7887765 455


Q ss_pred             CCCeEEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEecCCcE
Q psy7482         248 EESAITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITSAGDL  292 (327)
Q Consensus       248 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v  292 (327)
                      ..+.+.+||..+++.+....-.  .+..++-.+ .++++.+ .|.+
T Consensus       237 rGg~~~~~d~~tg~~~~~~~l~--D~cGva~~~~~f~~ssG-~G~~  279 (305)
T PF07433_consen  237 RGGRVAVWDAATGRLLGSVPLP--DACGVAPTDDGFLVSSG-QGQL  279 (305)
T ss_pred             CCCEEEEEECCCCCEeeccccC--ceeeeeecCCceEEeCC-CccE
Confidence            6788999999999988766544  455666666 6555554 4443

>KOG2695|consensus

Probab=99.10  E-value=4.9e-10  Score=86.57  Aligned_cols=146  Identities=15%  Similarity=0.277  Sum_probs=113.2

Q ss_pred             EEccC--CcEEEeecCCeEEEEEecCCceeeEecCCCceeEEEeec-CceEEEeCCCCcEEEEEcCCC-----ceeEEee
Q psy7482         152 VWSPE--GLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLN-ETTVCTGNEESAITAYNLTDG-----SHLWQIK  223 (327)
Q Consensus       152 ~~~~~--~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~d~~i~i~d~~~~-----~~~~~~~  223 (327)
                      +|+-+  +..+++|.+..+-+-|++++.. +.+...+.|.++.|.. ++++..|+.+|.|..+|++.+     .+.+.+ 
T Consensus       218 awSlni~gyhfs~G~sqqv~L~nvetg~~-qsf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-  295 (425)
T KOG2695|consen  218 AWSLNIMGYHFSVGLSQQVLLTNVETGHQ-QSFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-  295 (425)
T ss_pred             hhhhccceeeecccccceeEEEEeecccc-cccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-
Confidence            55532  3456677788899999887743 4455778899999987 489999999999999999875     233333 


Q ss_pred             ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce---eEEeecccCceEEEee--eC--cEEEEEecCCcEEEEE
Q psy7482         224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH---LWHIKASASRIKGLAS--HR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~--~~--~~l~~~~~dg~v~iw~  296 (327)
                      -|...|+++.... -++++|++.+.+|+|++||++.-++   +.++.+|...-.-+-+  .+  ..+++++.|-..|||.
T Consensus       296 yh~Ssvtslq~Lq-~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWs  374 (425)
T KOG2695|consen  296 YHDSSVTSLQILQ-FSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWS  374 (425)
T ss_pred             EcCcchhhhhhhc-cccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEe
Confidence            4888899998862 4789999999999999999987776   8888888644333332  22  8899999999999999


Q ss_pred             ccCc
Q psy7482         297 LNED  300 (327)
Q Consensus       297 ~~~~  300 (327)
                      +..+
T Consensus       375 l~~g  378 (425)
T KOG2695|consen  375 LDSG  378 (425)
T ss_pred             cccC
Confidence            9987

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.10  E-value=2.5e-07  Score=70.36  Aligned_cols=201  Identities=11%  Similarity=0.115  Sum_probs=129.9

Q ss_pred             CCCEEEEecCCCeEEEEEcccc--ccc---cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecc-
Q psy7482          23 TSKLAASSGADETVVLYDMVKR--KQS---GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH-   96 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~--~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-   96 (327)
                      +|++||.-- |..|.|-..++.  ..+   +.-+...-.=..++|+||+..||.+...|+|+++|+.. ..+..+...+ 
T Consensus         8 ~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I~p~~~   85 (282)
T PF15492_consen    8 DGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVIPPAMS   85 (282)
T ss_pred             CCcEEEEEe-ccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEcCcccc
Confidence            777777654 777777665442  111   12222333457899999999999999999999999975 3333432222 


Q ss_pred             ----cCCceeeEEEecCC------CEEEEEeCCCCEEEEEcCCC-----ceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          97 ----KGTAVNHISIHPSG------KLALSVGKDKTLRTWNLVKG-----RSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        97 ----~~~~v~~~~~~~~~------~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                          ....|..+.|.+..      ..|++-..+|.++-|-+..+     +....+.+..+  ....|.++.++|..++|+
T Consensus        86 ~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~--yp~Gi~~~vy~p~h~LLl  163 (282)
T PF15492_consen   86 FPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSH--YPHGINSAVYHPKHRLLL  163 (282)
T ss_pred             cCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEeccc--CCCceeEEEEcCCCCEEE
Confidence                11236777776532      25666777888888876432     22233333222  233499999999988887


Q ss_pred             eec---CC---------eEEEEEecCCceee-----------------------Ee-------cCCCceeEEEeecC-ce
Q psy7482         162 IPI---QN---------KAVVFSVEKAGVLQ-----------------------TL-------KSESKVHSVCFLNE-TT  198 (327)
Q Consensus       162 ~~~---~~---------~i~i~d~~~~~~~~-----------------------~~-------~~~~~i~~~~~~~~-~~  198 (327)
                      +|+   +.         .+..|.+-++.+-.                       .+       .....|..+..+|| ..
T Consensus       164 VgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~  243 (282)
T PF15492_consen  164 VGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSL  243 (282)
T ss_pred             EeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCE
Confidence            764   11         36667664432111                       00       12567889999999 88


Q ss_pred             EEEeCCCCcEEEEEcCCCceeEEeeeccc
Q psy7482         199 VCTGNEESAITAYNLTDGSHLWQIKASAS  227 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  227 (327)
                      |++...+|.|.+|++.+-+....++.++.
T Consensus       244 La~ih~sG~lsLW~iPsL~~~~~W~~~eq  272 (282)
T PF15492_consen  244 LACIHFSGSLSLWEIPSLRLQRSWKQDEQ  272 (282)
T ss_pred             EEEEEcCCeEEEEecCcchhhcccchhhC
Confidence            99999999999999998887777655444

>KOG1832|consensus

Probab=99.10  E-value=7.4e-11  Score=101.75  Aligned_cols=215  Identities=10%  Similarity=0.091  Sum_probs=150.9

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCC--cEEEEEcCC-
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGS-   85 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~-   85 (327)
                      +.|....+|++|  +.+.|+.|+..|.|+++++.+|.......+|..+|+.+.-+.+|..+++.+.-.  -..+|+..+ 
T Consensus      1098 rd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~ 1177 (1516)
T KOG1832|consen 1098 RDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASST 1177 (1516)
T ss_pred             hccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccc
Confidence            478899999999  788999999999999999999999999999999999999999998877655433  467899864 


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ  165 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  165 (327)
                      +...+.+      ..-.++.|+.....-+.|+......+||++++.....+....... ...-++..|+|+..++.-  |
T Consensus      1178 ~~~~Hsf------~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~-~y~~n~a~FsP~D~LIln--d 1248 (1516)
T KOG1832|consen 1178 GGPRHSF------DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTS-SYSNNLAHFSPCDTLILN--D 1248 (1516)
T ss_pred             cCccccc------cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhh-hhhccccccCCCcceEee--C
Confidence            3333333      225677888765444555555679999999988766543222211 122467889998877653  3


Q ss_pred             CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEE
Q psy7482         166 NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVC  244 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~  244 (327)
                      |  .+||++..+.++.|..-.--..-.|+|. ..++..+     .|||+++.+.++....-.  -..+.|.  ..|..+.
T Consensus      1249 G--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ld--qc~VtFN--stG~VmY 1317 (1516)
T KOG1832|consen 1249 G--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLD--QCAVTFN--STGDVMY 1317 (1516)
T ss_pred             c--eeeeeccHHHHhhhhhheecccccccCCCceEEeec-----hhhhhHHHHHHhcCcccc--ceEEEec--cCccchh
Confidence            3  5799998888887763222233458888 5565554     389999988777654322  2345563  4555544


Q ss_pred             E
Q psy7482         245 T  245 (327)
Q Consensus       245 ~  245 (327)
                      .
T Consensus      1318 a 1318 (1516)
T KOG1832|consen 1318 A 1318 (1516)
T ss_pred             h
Confidence            3

>KOG4714|consensus

Probab=99.09  E-value=4.1e-09  Score=78.48  Aligned_cols=192  Identities=13%  Similarity=0.148  Sum_probs=116.0

Q ss_pred             EEEEEe-CCCEEEEecCCCeEEEEEcccccccc------------ccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482          17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSG------------ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus        17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      ++.+.+ ....|+++..++.+......++.+..            .+..|+++-.+-+.+-.++.++++..||.+.+.+.
T Consensus        39 ~~~~~~v~~~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~  118 (319)
T KOG4714|consen   39 LSKVSLSAEYILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFST  118 (319)
T ss_pred             EEEeechhhheeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceEEEEec
Confidence            666667 67778888888777766654443322            22223322222222334667999999999999987


Q ss_pred             CCCe-EEEeEEecccCCceeeEEEecCCCEEEEEeC-----CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          84 GSWQ-LEKLFKKAHKGTAVNHISIHPSGKLALSVGK-----DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        84 ~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      +.-. ....+...|.+  -.+.++...++.+.++.-     -+..+.|+++..+.....   ..  ..+.+.+++-+|..
T Consensus       119 ~~~~~~~~~i~~~~~~--~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~---~~--~~~~v~~l~~hp~q  191 (319)
T KOG4714|consen  119 DKDLALMSRIPSIHSG--SASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPS---KK--ALDAVTALCSHPAQ  191 (319)
T ss_pred             hHHHhhhhhccccccc--ccccceeecccEEecCCcceEeeccceeeeccccccccccc---cc--ccccchhhhCCccc
Confidence            6521 11112111222  122233334444444321     234566666543322111   11  12238889999965


Q ss_pred             c-EEEeec-CCeEEEEEecCCceeeEe-c-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCC
Q psy7482         158 L-LYAIPI-QNKAVVFSVEKAGVLQTL-K-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       158 ~-~l~~~~-~~~i~i~d~~~~~~~~~~-~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~  215 (327)
                      + ++++|+ ||.+.+||.++......+ + |+.++..+.|+|.  ..|+++++||.+..||..+
T Consensus       192 q~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  192 QHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             ccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            4 555565 899999999987544433 3 8999999999996  7899999999999999764

>KOG0309|consensus

Probab=99.06  E-value=3e-09  Score=90.32  Aligned_cols=195  Identities=15%  Similarity=0.266  Sum_probs=140.3

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC--cE-EEeecCCeEEEEEecCC-
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG--LL-YAIPIQNKAVVFSVEKA-  176 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~-l~~~~~~~i~i~d~~~~-  176 (327)
                      +..+..+|.|+-++.++.-| +.+.|+...-.......+..   .-.+-...|+|..  .+ ++..+...-.+|++... 
T Consensus        27 ~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~t---pw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss  102 (1081)
T KOG0309|consen   27 FNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHIT---PWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS  102 (1081)
T ss_pred             ccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccC---cchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence            78889999999899888876 66777765322211111111   1126677888754  23 34444666678887532 


Q ss_pred             -ceeeE--ecCCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCc-eeEEeeecccceEEEEEEecCCCcEEEEecCCC
Q psy7482         177 -GVLQT--LKSESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGS-HLWQIKASASRIKGLVFFSIPQETTVCTGNEES  250 (327)
Q Consensus       177 -~~~~~--~~~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~  250 (327)
                       ..+.-  ..|...++.+.|.|+  ..+++++.|-.+..||+++.. ++..+..-......++|.. .++..+ +.+..+
T Consensus       103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwny-k~p~vl-asshg~  180 (1081)
T KOG0309|consen  103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNY-KDPNVL-ASSHGN  180 (1081)
T ss_pred             ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecc-cCcchh-hhccCC
Confidence             23332  237889999999997  789999999999999998764 3444444445577888863 445544 455677


Q ss_pred             eEEEEEcCCCc-eeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCcc
Q psy7482         251 AITAYNLTDGS-HLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       251 ~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      .|++||++.|. ++..+++|...|+.++|..   ..+.+.+.||+|+.|+.+...
T Consensus       181 ~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt  235 (1081)
T KOG0309|consen  181 DIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST  235 (1081)
T ss_pred             ceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence            89999998765 8899999999999999988   889999999999999998763

>KOG1275|consensus

Probab=99.02  E-value=1.2e-08  Score=88.68  Aligned_cols=179  Identities=13%  Similarity=0.235  Sum_probs=135.6

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCcee
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN  102 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  102 (327)
                      ++..++.|+-...+..+|+.+.+..+...-....|+-|+.  +++.+++|...|+|.+-|.++.+.++++ ..|.+. |.
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~-~aHs~s-iS  221 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTF-DAHSGS-IS  221 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeee-eccccc-ee
Confidence            5667777887788888999888877766655555776665  4789999999999999999999999999 999988 87


Q ss_pred             eEEEecCCCEEEEEeC---------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-cEEEee-cCCeEEEE
Q psy7482         103 HISIHPSGKLALSVGK---------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYAIP-IQNKAVVF  171 (327)
Q Consensus       103 ~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~~~~i~i~  171 (327)
                      .+..  .|+.|++++.         |..|++||++.-+.+..+.++..      ..-+.|.|.- ..++++ ..|...+.
T Consensus       222 DfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~------P~flrf~Psl~t~~~V~S~sGq~q~v  293 (1118)
T KOG1275|consen  222 DFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYG------PQFLRFHPSLTTRLAVTSQSGQFQFV  293 (1118)
T ss_pred             eeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccC------chhhhhcccccceEEEEecccceeec
Confidence            6555  5889999885         56689999998777655555444      4556778753 344444 48999998


Q ss_pred             EecC---C-ceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEc
Q psy7482         172 SVEK---A-GVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNL  213 (327)
Q Consensus       172 d~~~---~-~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~  213 (327)
                      |..+   . ..+..+. ....+..++++++ +.++.|..+|.|.+|.-
T Consensus       294 d~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  294 DTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD  341 (1118)
T ss_pred             cccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence            8332   2 1122223 4455999999998 88999999999999973

>KOG2114|consensus

Probab=99.02  E-value=2.4e-07  Score=80.34  Aligned_cols=210  Identities=10%  Similarity=0.132  Sum_probs=142.1

Q ss_pred             cEEEEEeCCCEEEEecCCCeEEEEEcccccccccccccccc-EEEEEECCCCCeEEEecCCC-----cEEEEEcCCC---
Q psy7482          16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGT-ITCLKFTPEGSHLISCSDDG-----SIAIFRVGSW---   86 (327)
Q Consensus        16 ~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~~---   86 (327)
                      .|.|++-.+..++.|+.+|.|.+.+- ..+.++.++.+... |..+....+..+|++.+.|+     .+++|+++.-   
T Consensus        27 ~isc~~s~~~~vvigt~~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n  105 (933)
T KOG2114|consen   27 AISCCSSSTGSVVIGTADGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN  105 (933)
T ss_pred             ceeEEcCCCceEEEeeccccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence            78888889999999999999988873 34555777777777 55554444456888877765     4899998532   


Q ss_pred             ---eEE---EeEE--ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc
Q psy7482          87 ---QLE---KLFK--KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL  158 (327)
Q Consensus        87 ---~~~---~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  158 (327)
                         ++.   +.+.  .+....|+.+++.+.+-+.++.|-.+|.|..+.-+--+.... +..-......+|+.+.+..+++
T Consensus       106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgs-r~~~~~~~~~pITgL~~~~d~~  184 (933)
T KOG2114|consen  106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGS-RQDYSHRGKEPITGLALRSDGK  184 (933)
T ss_pred             CCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhcccc-ceeeeccCCCCceeeEEecCCc
Confidence               233   1111  122344689999999989999999999999885321111000 1111122346699999999887


Q ss_pred             E-EEeecCCeEEEEEecCCce-eeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee-ecccc
Q psy7482         159 L-YAIPIQNKAVVFSVEKAGV-LQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK-ASASR  228 (327)
Q Consensus       159 ~-l~~~~~~~i~i~d~~~~~~-~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~  228 (327)
                      . +.+++...|.+|.+....+ ...+. +.....|..+++. ..+++++ +..+.+|+....++-..+. +|...
T Consensus       185 s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~cfaf~~g~kk~  258 (933)
T KOG2114|consen  185 SVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGPCFAFEVGEKKE  258 (933)
T ss_pred             eeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcceeeeecCCCeEE
Confidence            6 5566678899999985442 33344 6678888888887 4355554 3468999988777777776 66543

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=99.01  E-value=7.9e-10  Score=59.43  Aligned_cols=39  Identities=28%  Similarity=0.550  Sum_probs=36.5

Q ss_pred             cccccccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482          44 RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus        44 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      ++++.++.+|.++|++++|+|++++|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            356788999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1832|consensus

Probab=98.98  E-value=3.3e-10  Score=97.90  Aligned_cols=200  Identities=19%  Similarity=0.263  Sum_probs=146.2

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TL  122 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i  122 (327)
                      +...++..|+..-+|++|+.+.+.|+.|+..|.|+++++.+|...... ..|... |+.+.-+.+|..+++.+.-.  -.
T Consensus      1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~-ncH~Sa-vT~vePs~dgs~~Ltsss~S~Pls 1169 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESV-NCHQSA-VTLVEPSVDGSTQLTSSSSSSPLS 1169 (1516)
T ss_pred             ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccc-cccccc-cccccccCCcceeeeeccccCchH
Confidence            445667788999999999999999999999999999999999998888 888887 99999888998777665432  46


Q ss_pred             EEEEcCC-CceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-----CCCceeEEEeec
Q psy7482         123 RTWNLVK-GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-----SESKVHSVCFLN  195 (327)
Q Consensus       123 ~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-----~~~~i~~~~~~~  195 (327)
                      .+|++.+ +...     +.    ...-.++.|+...+.-+.|. .....+||++++.++.++-     ....-++..|+|
T Consensus      1170 aLW~~~s~~~~~-----Hs----f~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP 1240 (1516)
T KOG1832|consen 1170 ALWDASSTGGPR-----HS----FDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSP 1240 (1516)
T ss_pred             HHhccccccCcc-----cc----ccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCC
Confidence            7899864 1111     11    12256788887766556665 5678899999998777632     233447788999


Q ss_pred             CceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482         196 ETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       196 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  267 (327)
                      +..|+.  .||  .+||.+..+.++.|......+. -.|+  |.|..++.-++     |||+++.+.++...
T Consensus      1241 ~D~LIl--ndG--vLWDvR~~~aIh~FD~ft~~~~-G~FH--P~g~eVIINSE-----IwD~RTF~lLh~VP 1300 (1516)
T KOG1832|consen 1241 CDTLIL--NDG--VLWDVRIPEAIHRFDQFTDYGG-GGFH--PSGNEVIINSE-----IWDMRTFKLLHSVP 1300 (1516)
T ss_pred             CcceEe--eCc--eeeeeccHHHHhhhhhheeccc-cccc--CCCceEEeech-----hhhhHHHHHHhcCc
Confidence            855544  344  4799998888877765443222 2455  88988888775     89998877655443

>KOG1920|consensus

Probab=98.96  E-value=8.4e-07  Score=79.95  Aligned_cols=238  Identities=12%  Similarity=0.155  Sum_probs=139.5

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA  133 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  133 (327)
                      ...|.++.|..+.+.++.+..+|.|.+-|.++......  ..-... |.+++|+||.+.++..+..+++.+-. .+-.++
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eiv--g~vd~G-I~aaswS~Dee~l~liT~~~tll~mT-~~f~~i  143 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELEIV--GNVDNG-ISAASWSPDEELLALITGRQTLLFMT-KDFEPI  143 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEcccccceeee--eeccCc-eEEEeecCCCcEEEEEeCCcEEEEEe-ccccch
Confidence            36899999999999999999999999998876544322  223344 99999999999999988877776654 333333


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCC-ceeeEecCCCceeEEEeecCc-eEEEe-----CCCC
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKA-GVLQTLKSESKVHSVCFLNET-TVCTG-----NEES  206 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~-~l~~~-----~~d~  206 (327)
                      ...++.......+....+-|-.....+-. +.|.....+.... +........+.=++++|-.|+ ++++.     ....
T Consensus       144 ~E~~L~~d~~~~sk~v~VGwGrkeTqfrg-s~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R  222 (1265)
T KOG1920|consen  144 AEKPLDADDERKSKFVNVGWGRKETQFRG-SEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR  222 (1265)
T ss_pred             hccccccccccccccceecccccceeeec-chhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence            33223211111122334444433222211 1111111111100 111111123344578898884 66652     2337


Q ss_pred             cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEe---cCCCeEEEEEcCCCce----eEEeecccCceEEEeee
Q psy7482         207 AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG---NEESAITAYNLTDGSH----LWHIKASASRIKGLASH  279 (327)
Q Consensus       207 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~---~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~  279 (327)
                      .|++||-+ +..-..-....+.-.+++|-  |.|..+++-   ..|+.|.+|.- +|-.    ...+.....++..++|+
T Consensus       223 kirV~drE-g~Lns~se~~~~l~~~LsWk--Psgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wn  298 (1265)
T KOG1920|consen  223 KIRVYDRE-GALNSTSEPVEGLQHSLSWK--PSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWN  298 (1265)
T ss_pred             eEEEeccc-chhhcccCcccccccceeec--CCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeec
Confidence            89999976 44332223333444578885  889888874   34567999983 3332    22233334458999999


Q ss_pred             C--cEEEE---EecCCcEEEEEccCc
Q psy7482         280 R--NHLIC---ITSAGDLVVWELNED  300 (327)
Q Consensus       280 ~--~~l~~---~~~dg~v~iw~~~~~  300 (327)
                      .  ..|+.   ......|++|-+..-
T Consensus       299 s~sdiLAv~~~~~e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  299 SNSDILAVVTSNLENSLVQLWTTGNY  324 (1265)
T ss_pred             CCCCceeeeecccccceEEEEEecCe
Confidence            8  66666   344445999988775

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.96  E-value=9.2e-06  Score=64.61  Aligned_cols=256  Identities=11%  Similarity=0.109  Sum_probs=159.7

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCCeEEEeEEeccc-----C
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQLEKLFKKAHK-----G   98 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~~~~~~-----~   98 (327)
                      +.+.++|..+++.+..+..  +-.-.+..+|+++.++++.          ..-.|.+||..+......+.....     .
T Consensus        17 ~rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~   94 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV   94 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred             ceEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec
Confidence            4799999999887776653  2233466799999888753          233699999999888776633321     1


Q ss_pred             CceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEec-C
Q psy7482          99 TAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVE-K  175 (327)
Q Consensus        99 ~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~-~  175 (327)
                      .....+.++.|+++++....  -..|.+.|+..++.+..+..+..       ..+--+++..+...|.||.+.-..+. .
T Consensus        95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC-------~~iyP~~~~~F~~lC~DGsl~~v~Ld~~  167 (342)
T PF06433_consen   95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGC-------WLIYPSGNRGFSMLCGDGSLLTVTLDAD  167 (342)
T ss_dssp             --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSE-------EEEEEEETTEEEEEETTSCEEEEEETST
T ss_pred             ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCE-------EEEEecCCCceEEEecCCceEEEEECCC
Confidence            11345688889998877643  45799999999888777766653       23333334557777789999888887 4


Q ss_pred             CceeeEec-----CCC-ceeEEEeecC-ceEEEeCCCCcEEEEEcCCCcee--EEeeec----------ccceEEEEEEe
Q psy7482         176 AGVLQTLK-----SES-KVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHL--WQIKAS----------ASRIKGLVFFS  236 (327)
Q Consensus       176 ~~~~~~~~-----~~~-~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~----------~~~v~~~~~~~  236 (327)
                      |+......     ... .+..-++... +.++--+.+|.|+-.|+......  ..+..-          .+.-.-+++++
T Consensus       168 Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~  247 (342)
T PF06433_consen  168 GKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHA  247 (342)
T ss_dssp             SSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEET
T ss_pred             CCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeecc
Confidence            55443221     112 2233344444 56666788999999888765432  112110          11233456652


Q ss_pred             cCCCcEEEEe--cCC-------CeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEE-ecCCcEEEEEccCc
Q psy7482         237 IPQETTVCTG--NEE-------SAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICI-TSAGDLVVWELNED  300 (327)
Q Consensus       237 s~~~~~l~~~--~~d-------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~-~~dg~v~iw~~~~~  300 (327)
                       +.+++.+..  +.+       ..|-++|+.+++.+.++... .++.+|+.+.   .+|++. ..++.+.+||..++
T Consensus       248 -~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tG  322 (342)
T PF06433_consen  248 -ASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATG  322 (342)
T ss_dssp             -TTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE-EEESEEEEESSSS-EEEEEETTTTEEEEEETTT-
T ss_pred             -ccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC-CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCC
Confidence             344443321  111       14888899999999888853 3677899888   566655 45789999999998

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>KOG1920|consensus

Probab=98.95  E-value=1.1e-06  Score=79.22  Aligned_cols=268  Identities=12%  Similarity=0.153  Sum_probs=152.2

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .+.|.++.|  +++-++.+..+|.|.+-|.++.... ....-...|.+++|+||++.++..+..+++.+-. .+..++..
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~i~E  145 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQTLLFMT-KDFEPIAE  145 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccchhc
Confidence            368999999  8888888888999999987765432 2222457799999999999999988887776643 23333322


Q ss_pred             EEe----cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce-eeeeeccccCccccceEEEEEccCCcEEEee---
Q psy7482          92 FKK----AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS-AYITNLSSYGVGFENLDSVVWSPEGLLYAIP---  163 (327)
Q Consensus        92 ~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---  163 (327)
                      .+.    ...+. .-.+-|-...+ -+-|+ .|.....+....+. .......      +.=..++|.-||+++|+.   
T Consensus       146 ~~L~~d~~~~sk-~v~VGwGrkeT-qfrgs-~gr~~~~~~~~~ek~~~~~~~~------~~~~~IsWRgDg~~fAVs~~~  216 (1265)
T KOG1920|consen  146 KPLDADDERKSK-FVNVGWGRKET-QFRGS-EGRQAARQKIEKEKALEQIEQD------DHKTSISWRGDGEYFAVSFVE  216 (1265)
T ss_pred             cccccccccccc-cceecccccce-eeecc-hhhhcccccccccccccchhhc------cCCceEEEccCCcEEEEEEEe
Confidence            211    00011 12222322111 11111 12222211111100 0000011      114579999999999984   


Q ss_pred             --cC-CeEEEEEecCCceeeEec-CCCceeEEEeecCc-eEEEe---CCCCcEEEEEcCC---CceeEEeeecccceEEE
Q psy7482         164 --IQ-NKAVVFSVEKAGVLQTLK-SESKVHSVCFLNET-TVCTG---NEESAITAYNLTD---GSHLWQIKASASRIKGL  232 (327)
Q Consensus       164 --~~-~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~---~~d~~i~i~d~~~---~~~~~~~~~~~~~v~~~  232 (327)
                        .+ ..|++||.+ +..-..-. ..+.-.+++|-|.+ .+++-   ..|+.|.+|.-+.   ++....+.....++..+
T Consensus       217 ~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L  295 (1265)
T KOG1920|consen  217 SETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEEL  295 (1265)
T ss_pred             ccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchhee
Confidence              34 789999977 43322222 34456688999984 44432   3566788887432   22222234444558999


Q ss_pred             EEEecCCCcEEEE---ecCCCeEEEEEcCCCc--eeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEc
Q psy7482         233 VFFSIPQETTVCT---GNEESAITAYNLTDGS--HLWHIKASASRIKGLASHR---NHLICITSAGDLVVWEL  297 (327)
Q Consensus       233 ~~~~s~~~~~l~~---~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~  297 (327)
                      +|+  .++..|++   ......|++|-+.+..  +-..+.-.....  +.|+|   ..+..-..+|...++++
T Consensus       296 ~Wn--s~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~~~  364 (1265)
T KOG1920|consen  296 AWN--SNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLVRDF  364 (1265)
T ss_pred             eec--CCCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEEEEE
Confidence            996  78888887   4555569999987765  222232222222  77777   33333336666555443

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.95  E-value=6.6e-07  Score=70.07  Aligned_cols=181  Identities=13%  Similarity=0.195  Sum_probs=121.8

Q ss_pred             CCCEEEEec-----CCCeEEEEEcc-ccccccccccccccEEEEEECCCCCeEEEec------------------CCCcE
Q psy7482          23 TSKLAASSG-----ADETVVLYDMV-KRKQSGALMQHEGTITCLKFTPEGSHLISCS------------------DDGSI   78 (327)
Q Consensus        23 ~~~~l~~~~-----~dg~v~~w~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------------~d~~i   78 (327)
                      ||++|++.-     ..|.|-|||.. +.+.+.++..|.-.-..+.+.|||+.|+++-                  .+-++
T Consensus        61 dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL  140 (305)
T PF07433_consen   61 DGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSL  140 (305)
T ss_pred             CCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCce
Confidence            888888764     35889999998 6677788887777778889999998887762                  12356


Q ss_pred             EEEEcCCCeEEEeEEe--c-ccCCceeeEEEecCCCEEEEEeCCCC-------EEEEEcCCCceeeeeecccc--Ccccc
Q psy7482          79 AIFRVGSWQLEKLFKK--A-HKGTAVNHISIHPSGKLALSVGKDKT-------LRTWNLVKGRSAYITNLSSY--GVGFE  146 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~--~-~~~~~v~~~~~~~~~~~l~~~~~dg~-------i~iwd~~~~~~~~~~~~~~~--~~~~~  146 (327)
                      ...|..+|+.+.....  . |..+ |..+++.++|..++..-..|.       +-+++.  ++....+..+..  ..-..
T Consensus       141 ~~ld~~sG~ll~q~~Lp~~~~~lS-iRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~~~~~~p~~~~~~l~~  217 (305)
T PF07433_consen  141 VYLDARSGALLEQVELPPDLHQLS-IRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGALRLLPAPEEQWRRLNG  217 (305)
T ss_pred             EEEecCCCceeeeeecCccccccc-eeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcceeccCChHHHHhhCC
Confidence            6677888888777422  2 4445 999999999876665544332       334433  232222222211  11224


Q ss_pred             ceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcE
Q psy7482         147 NLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAI  208 (327)
Q Consensus       147 ~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i  208 (327)
                      .+-++++++++.++++++  .+.+.+||..+++.+...... .+..++..+++++++.+ .|.+
T Consensus       218 Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~-D~cGva~~~~~f~~ssG-~G~~  279 (305)
T PF07433_consen  218 YIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLP-DACGVAPTDDGFLVSSG-QGQL  279 (305)
T ss_pred             ceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccC-ceeeeeecCCceEEeCC-CccE
Confidence            489999999999888877  789999999999887776532 24455555556555444 4443

>KOG0882|consensus

Probab=98.90  E-value=1.4e-08  Score=81.48  Aligned_cols=203  Identities=17%  Similarity=0.219  Sum_probs=145.1

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCC--C-eEEEeEEecccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcC
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS--W-QLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLV  128 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~--~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~  128 (327)
                      |.+.|+.+.-. ..+++.+++.||.++.|.-..  + +.+..+ ..|... |.+++.+.++.++.+.+. |..++++|++
T Consensus         8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhF-raHL~~-I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvE   84 (558)
T KOG0882|consen    8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHF-RAHLGV-ILSLAVSYDGWLFRSVEDPDHSVKVFDVE   84 (558)
T ss_pred             ccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhh-HHHHHH-HHhhhccccceeEeeccCcccceeEEEee
Confidence            77778777544 467999999999999997543  2 233344 566666 889999999999999777 9999999998


Q ss_pred             CCceeeeeeccccCccccceEEEEE--ccCC--cEEEeec--CCeEEEEEecCCc-eeeEec--CCCceeEEEeecC-ce
Q psy7482         129 KGRSAYITNLSSYGVGFENLDSVVW--SPEG--LLYAIPI--QNKAVVFSVEKAG-VLQTLK--SESKVHSVCFLNE-TT  198 (327)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~--~~l~~~~--~~~i~i~d~~~~~-~~~~~~--~~~~i~~~~~~~~-~~  198 (327)
                      +-.....+.+...      ...+.|  +|..  ..++++.  ++.+.++|-.... ....++  |..+|..+.+.+- ..
T Consensus        85 n~DminmiKL~~l------Pg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds  158 (558)
T KOG0882|consen   85 NFDMINMIKLVDL------PGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDS  158 (558)
T ss_pred             ccchhhhcccccC------CCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccc
Confidence            7665544444433      222333  2221  2566664  7899999977554 233333  8899999999997 77


Q ss_pred             EEEeCCCCcEEEEEcCC------CceeEE---------eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482         199 VCTGNEESAITAYNLTD------GSHLWQ---------IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~------~~~~~~---------~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                      +++....|.|.-|....      .+....         +.-......++.|+  |++..+.+-+.|..|++++..+++.+
T Consensus       159 ~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efs--p~g~qistl~~DrkVR~F~~KtGklv  236 (558)
T KOG0882|consen  159 AVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFS--PDGAQISTLNPDRKVRGFVFKTGKLV  236 (558)
T ss_pred             eeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEc--cccCcccccCcccEEEEEEeccchhh
Confidence            88888899999998762      111111         12233456788884  99999999999999999999998765


Q ss_pred             EEe
Q psy7482         264 WHI  266 (327)
Q Consensus       264 ~~~  266 (327)
                      +.+
T Consensus       237 qei  239 (558)
T KOG0882|consen  237 QEI  239 (558)
T ss_pred             hhh
Confidence            443

>KOG2066|consensus

Probab=98.90  E-value=3.1e-07  Score=79.07  Aligned_cols=161  Identities=14%  Similarity=0.188  Sum_probs=113.0

Q ss_pred             eeeeccCCccEEEEEe--C-------------CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCC-----C
Q psy7482           7 TFVTHSHTASVRSVAA--T-------------SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-----G   66 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~-------------~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~-----~   66 (327)
                      .|.+..|.+.|.-..+  +             |.++++|+.||+|.|-.+-+.+...++. ...++.+++++|+     .
T Consensus        51 ~~~~GtH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksial~Pd~~~~~s  129 (846)
T KOG2066|consen   51 FFALGTHRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIALHPDFSRQQS  129 (846)
T ss_pred             eeeeccccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEEeccchhhhhh
Confidence            3445567777766665  4             8899999999999999998888776665 4578999999997     5


Q ss_pred             CeEEEecCCCcEEEEEcCC-CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCc-c
Q psy7482          67 SHLISCSDDGSIAIFRVGS-WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV-G  144 (327)
Q Consensus        67 ~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~  144 (327)
                      +.+++|+..| +.++.-+- ++..........+. |.++.|.  |+++|-++.+| |++||..+++.+..++.+.... .
T Consensus       130 k~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~-I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~  204 (846)
T KOG2066|consen  130 KQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGP-IHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRP  204 (846)
T ss_pred             hheeecCcce-EEEehhhhhcCccceeeecCccc-eEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCc
Confidence            6899999988 77765321 11111221344455 9999997  77888888776 9999999887766554443211 1


Q ss_pred             ccceEEEEEccCCcEEEeecCCeEEEEEec
Q psy7482         145 FENLDSVVWSPEGLLYAIPIQNKAVVFSVE  174 (327)
Q Consensus       145 ~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~  174 (327)
                      ......+.|.++. .++.|-..+|++..++
T Consensus       205 e~fpphl~W~~~~-~LVIGW~d~v~i~~I~  233 (846)
T KOG2066|consen  205 ELFPPHLHWQDED-RLVIGWGDSVKICSIK  233 (846)
T ss_pred             ccCCCceEecCCC-eEEEecCCeEEEEEEe
Confidence            1224567777655 5666667778888777

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.90  E-value=2.7e-05  Score=67.78  Aligned_cols=274  Identities=10%  Similarity=0.108  Sum_probs=161.4

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccccc-ccEE---E-------EEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTIT---C-------LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~-~~v~---~-------~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .+..++.++.++.|+-.|..+|+.+..+.... ..+.   +       +++  .+..++.++.|+.+.-.|.++|+.+..
T Consensus        68 ~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~  145 (527)
T TIGR03075        68 VDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWS  145 (527)
T ss_pred             ECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEee
Confidence            45667777778899999999998877654211 1111   1       122  234677788899999999999998877


Q ss_pred             EEecccC--CceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCc--------------------
Q psy7482          92 FKKAHKG--TAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGV--------------------  143 (327)
Q Consensus        92 ~~~~~~~--~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~--------------------  143 (327)
                      .......  ..+.+--.--++ .++.+..      +|.|..+|.++|+.+..........                    
T Consensus       146 ~~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~  224 (527)
T TIGR03075       146 KKNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWP  224 (527)
T ss_pred             cccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCC
Confidence            6322111  001111111134 4555432      6899999999999887654432110                    


Q ss_pred             ------cccce-EEEEEccCCcEEEeec------CC-----------eEEEEEecCCceeeEec---CC-------Ccee
Q psy7482         144 ------GFENL-DSVVWSPEGLLYAIPI------QN-----------KAVVFSVEKAGVLQTLK---SE-------SKVH  189 (327)
Q Consensus       144 ------~~~~v-~~~~~~~~~~~l~~~~------~~-----------~i~i~d~~~~~~~~~~~---~~-------~~i~  189 (327)
                            ....+ ..+++.|+..++..+.      ++           .|.-.|+++|+....++   |.       ....
T Consensus       225 ~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~  304 (527)
T TIGR03075       225 GDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMI  304 (527)
T ss_pred             CCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcE
Confidence                  00011 1346666665555543      12           67888999999988776   21       1122


Q ss_pred             EEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEee--e----------cc-cce-----------------------
Q psy7482         190 SVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIK--A----------SA-SRI-----------------------  229 (327)
Q Consensus       190 ~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~--~----------~~-~~v-----------------------  229 (327)
                      -+....+    ..++.+..+|.+++.|-++++.+...+  .          .. .++                       
T Consensus       305 l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~  384 (527)
T TIGR03075       305 LFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFL  384 (527)
T ss_pred             EEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCc
Confidence            2222223    367789999999999999998752210  0          00 000                       


Q ss_pred             -----EEEEEEecCCCcEEEEecC---------------------------------CCeEEEEEcCCCceeEEeecccC
Q psy7482         230 -----KGLVFFSIPQETTVCTGNE---------------------------------ESAITAYNLTDGSHLWHIKASAS  271 (327)
Q Consensus       230 -----~~~~~~~s~~~~~l~~~~~---------------------------------d~~i~i~d~~~~~~~~~~~~~~~  271 (327)
                           ..+++  +|+..+++....                                 -|.|.-+|+.+++..+..+....
T Consensus       385 Gg~~W~~~A~--Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p  462 (527)
T TIGR03075       385 GGKNWQPMAY--SPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFP  462 (527)
T ss_pred             CCCCCCCceE--CCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCC
Confidence                 01222  233333332211                                 25688889999998887764332


Q ss_pred             ceEE-EeeeCcEEEEEecCCcEEEEEccCcc
Q psy7482         272 RIKG-LASHRNHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       272 ~v~~-~~~~~~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      ...+ +.....+++.++.||.++.+|..++.
T Consensus       463 ~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe  493 (527)
T TIGR03075       463 LWGGVLATAGDLVFYGTLEGYFKAFDAKTGE  493 (527)
T ss_pred             CCCcceEECCcEEEEECCCCeEEEEECCCCC
Confidence            2222 22233777788889999999999993

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=98.88  E-value=5e-08  Score=74.76  Aligned_cols=234  Identities=15%  Similarity=0.203  Sum_probs=138.9

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe-----EEEeEEecccC-----------CceeeEEEecCC--CEEE
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-----LEKLFKKAHKG-----------TAVNHISIHPSG--KLAL  114 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~~~-----------~~v~~~~~~~~~--~~l~  114 (327)
                      ....|+++.|...|.+|++|...|.|.++.-+...     ....+ +.|..           ..|..+.|..++  ..++
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teF-Qshe~EFDYLkSleieEKin~I~w~~~t~r~hFL  103 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEF-QSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL  103 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhh-cccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence            34679999999999999999999999999764322     11112 22211           127888887654  3566


Q ss_pred             EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe-------ec--CCeEEEEEecCCceeeEecCC
Q psy7482         115 SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI-------PI--QNKAVVFSVEKAGVLQTLKSE  185 (327)
Q Consensus       115 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-------~~--~~~i~i~d~~~~~~~~~~~~~  185 (327)
                      ..+.|.+|++|.+......... ....      -.++.+...|.+...       .+  +..|...    ...+..-.|.
T Consensus       104 lstNdktiKlWKiyeknlk~va-~nnl------s~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~----p~rvyaNaH~  172 (460)
T COG5170         104 LSTNDKTIKLWKIYEKNLKVVA-ENNL------SDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAK----PCRVYANAHP  172 (460)
T ss_pred             EecCCceeeeeeeecccchhhh-cccc------ccccccccCCCcCCHHHhhcccccccceEEEec----cceeccccce
Confidence            6778999999998765332111 1100      001111111111100       01  1111111    1112222377


Q ss_pred             CceeEEEeecCceEEEeCCCCcEEEEEcCCCce---eEEeeecc-----cceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         186 SKVHSVCFLNETTVCTGNEESAITAYNLTDGSH---LWQIKASA-----SRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       186 ~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~-----~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      ..+.++.+..|...+....|-.|.+|++.-...   +-.++.|.     .-|++..|+| .....+.-.+..|.|++-|+
T Consensus       173 yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp-~~cn~fmYSsSkG~Ikl~Dl  251 (460)
T COG5170         173 YHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHP-EMCNVFMYSSSKGEIKLNDL  251 (460)
T ss_pred             eEeeeeeecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCH-hHcceEEEecCCCcEEehhh
Confidence            889999999995555566788899998864332   22234443     3577888874 44556666777899999999


Q ss_pred             CCCc------eeEE----------eecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         258 TDGS------HLWH----------IKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       258 ~~~~------~~~~----------~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +...      .+..          +..-...|..+.|++  +++++- .--+|++||++..
T Consensus       252 Rq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsR-dyltvkiwDvnm~  311 (460)
T COG5170         252 RQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSR-DYLTVKIWDVNMA  311 (460)
T ss_pred             hhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEe-ccceEEEEecccc
Confidence            8432      1111          111234688899999  455544 4568999999876

>KOG3621|consensus

Probab=98.86  E-value=1e-06  Score=75.05  Aligned_cols=160  Identities=13%  Similarity=0.107  Sum_probs=105.9

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      +...|.--++...+++++.|+.-|.+++|+-..++....-..+..+. +..+..+++..++|.|+..|.|.++.+..+..
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~-~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p  110 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGI-TCVRSVSSVEYLVAAGTASGRVSVFQLNKELP  110 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccce-EEEEEecchhHhhhhhcCCceEEeehhhccCC
Confidence            33444444556678999999999999999987766544432233333 66777888888899999999999998876443


Q ss_pred             eee-eeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC-----ceeeEecCCCceeEEEeecCceEEEeCCC
Q psy7482         133 AYI-TNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA-----GVLQTLKSESKVHSVCFLNETTVCTGNEE  205 (327)
Q Consensus       133 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~-----~~~~~~~~~~~i~~~~~~~~~~l~~~~~d  205 (327)
                      ... +..+....|...|++++|++++..+.+|. .|.|..-.+...     .....+...+.|..+..... +|++++.-
T Consensus       111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~-~LLVStl~  189 (726)
T KOG3621|consen  111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQS-YLLVSTLT  189 (726)
T ss_pred             CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecccc-eehHhhhh
Confidence            322 22223344567799999999999999997 788888777661     11222335677777776543 44433332


Q ss_pred             CcEEEEEcCC
Q psy7482         206 SAITAYNLTD  215 (327)
Q Consensus       206 ~~i~i~d~~~  215 (327)
                      . ..+++++.
T Consensus       190 r-~~Lc~tE~  198 (726)
T KOG3621|consen  190 R-CILCQTEA  198 (726)
T ss_pred             h-hheeecch
Confidence            2 23445443

>KOG2114|consensus

Probab=98.86  E-value=2e-06  Score=74.92  Aligned_cols=210  Identities=13%  Similarity=0.214  Sum_probs=134.6

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC-----EEEEEcCCC
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT-----LRTWNLVKG  130 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~  130 (327)
                      .++|  |++.+..++.|+.+|.|.+.+-. .+....+ ..+...-|..+....+..+|++.+.|+.     +++|+++..
T Consensus        27 ~isc--~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~f-qa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~  102 (933)
T KOG2114|consen   27 AISC--CSSSTGSVVIGTADGRVVILNSS-FQLIRGF-QAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKV  102 (933)
T ss_pred             ceeE--EcCCCceEEEeeccccEEEeccc-ceeeehh-eecchhhhhHhhcccCceEEEEEeecCCCCceEEEEeccccc
Confidence            4544  57788899999999999888743 3444666 4554442444444444468888877654     899998753


Q ss_pred             c------eeeeeeccc--cCccccceEEEEEccCCcEEEeec-CCeEEEEEec---C--CceeeEecCCCceeEEEeecC
Q psy7482         131 R------SAYITNLSS--YGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVE---K--AGVLQTLKSESKVHSVCFLNE  196 (327)
Q Consensus       131 ~------~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~---~--~~~~~~~~~~~~i~~~~~~~~  196 (327)
                      +      +........  .+....++.+++.+.+-+.+++|. +|.|..+.-.   .  .+.........+|+.+++..+
T Consensus       103 ~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d  182 (933)
T KOG2114|consen  103 DKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSD  182 (933)
T ss_pred             CCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecC
Confidence            1      121111111  123356789999999989999997 8988887421   1  122223336789999999877


Q ss_pred             -ceEEEeCCCCcEEEEEcCCCce-eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee-cccCc
Q psy7482         197 -TTVCTGNEESAITAYNLTDGSH-LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK-ASASR  272 (327)
Q Consensus       197 -~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~  272 (327)
                       ..++....-..|.+|.+....+ ...+..|...+.|..+++ +.++ +++++ +..+.+|+.....+-..+. +|...
T Consensus       183 ~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~-~t~q-fIca~-~e~l~fY~sd~~~~cfaf~~g~kk~  258 (933)
T KOG2114|consen  183 GKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSD-GTYQ-FICAG-SEFLYFYDSDGRGPCFAFEVGEKKE  258 (933)
T ss_pred             CceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCC-CCcc-EEEec-CceEEEEcCCCcceeeeecCCCeEE
Confidence             3323333445789999985443 444677778888888852 2333 44443 3579999988777777776 66533

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.85  E-value=1.5e-05  Score=63.85  Aligned_cols=227  Identities=14%  Similarity=0.136  Sum_probs=134.8

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE----------
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF----------   92 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~----------   92 (327)
                      .++.|+.|..+| +.+++.........+. +..+|..+...|+-+.|++-+ |+.+.++++.........          
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~   82 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRS   82 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccccc
Confidence            678899999888 9999983332222222 233499999999877766655 599999998764433311          


Q ss_pred             ---EecccCCceeeEE--EecCCCEEEEEeCCCCEEEEEcCCC-----ceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          93 ---KKAHKGTAVNHIS--IHPSGKLALSVGKDKTLRTWNLVKG-----RSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        93 ---~~~~~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                         ....... +...+  -...+...+.......|.+|.....     +....+..+..      +.+++|.  ++.++.
T Consensus        83 ~~~~~~~~~~-v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~------~~~i~~~--~~~i~v  153 (275)
T PF00780_consen   83 LPTKLPETKG-VSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDP------PSSIAFL--GNKICV  153 (275)
T ss_pred             ccccccccCC-eeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCC------cEEEEEe--CCEEEE
Confidence               0111222 44433  1123333333444468999887653     23344445443      8899998  667888


Q ss_pred             ecCCeEEEEEecCCceeeEecC-------------CCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeE--Eeeeccc
Q psy7482         163 PIQNKAVVFSVEKAGVLQTLKS-------------ESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLW--QIKASAS  227 (327)
Q Consensus       163 ~~~~~i~i~d~~~~~~~~~~~~-------------~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~  227 (327)
                      +..+...+.|+.++.....+..             ..++..+....+.+|++ . +..-.+.|. .|++.+  .+.- ..
T Consensus       154 ~~~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~-~-~~~g~fv~~-~G~~~r~~~i~W-~~  229 (275)
T PF00780_consen  154 GTSKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLC-Y-DNIGVFVNK-NGEPSRKSTIQW-SS  229 (275)
T ss_pred             EeCCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEE-e-cceEEEEcC-CCCcCcccEEEc-CC
Confidence            8777889999997766554431             12333444433344443 2 223333343 454433  2332 23


Q ss_pred             ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         228 RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       228 ~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      ...++++.    ..+|++.+. +.|.||++.++++++.+...+
T Consensus       230 ~p~~~~~~----~pyli~~~~-~~iEV~~~~~~~lvQ~i~~~~  267 (275)
T PF00780_consen  230 APQSVAYS----SPYLIAFSS-NSIEVRSLETGELVQTIPLPN  267 (275)
T ss_pred             chhEEEEE----CCEEEEECC-CEEEEEECcCCcEEEEEECCC
Confidence            45666663    346766665 459999999999988887553

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG1275|consensus

Probab=98.82  E-value=9.4e-08  Score=83.31  Aligned_cols=149  Identities=13%  Similarity=0.144  Sum_probs=115.1

Q ss_pred             cEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---------CcEEEEEcCCC
Q psy7482          16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---------GSIAIFRVGSW   86 (327)
Q Consensus        16 ~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~iw~~~~~   86 (327)
                      .|.-|+.+++++.+|...|+|.+-|..+.+.++++..|++.|.++...  |+.|+++|..         .-|+|||++..
T Consensus       179 ~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~--GNlLitCG~S~R~~~l~~D~FvkVYDLRmm  256 (1118)
T KOG1275|consen  179 GVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQ--GNLLITCGYSMRRYNLAMDPFVKVYDLRMM  256 (1118)
T ss_pred             ceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeecc--CCeEEEeecccccccccccchhhhhhhhhh
Confidence            477788899999999999999999999999999999999999887664  8899998764         45899999988


Q ss_pred             eEEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCC-ce-eeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKG-RS-AYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~-~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      +.+..+ ..+.+  ..-+.|+|. ...+++++..|...+-|..+- ++ .........   ...+..++++++++.++.+
T Consensus       257 ral~PI-~~~~~--P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~---~s~i~~fDiSsn~~alafg  330 (1118)
T KOG1275|consen  257 RALSPI-QFPYG--PQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPN---GSGISAFDISSNGDALAFG  330 (1118)
T ss_pred             hccCCc-ccccC--chhhhhcccccceEEEEecccceeeccccccCCCccceeEEccC---CCcceeEEecCCCceEEEe
Confidence            777666 44443  355678883 457888888999999993321 11 111111111   1228999999999999999


Q ss_pred             c-CCeEEEEE
Q psy7482         164 I-QNKAVVFS  172 (327)
Q Consensus       164 ~-~~~i~i~d  172 (327)
                      . +|.|.+|.
T Consensus       331 d~~g~v~~wa  340 (1118)
T KOG1275|consen  331 DHEGHVNLWA  340 (1118)
T ss_pred             cccCcEeeec
Confidence            8 99999997

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.82  E-value=1.6e-05  Score=66.02  Aligned_cols=243  Identities=14%  Similarity=0.172  Sum_probs=134.1

Q ss_pred             CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecc----------------
Q psy7482          33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH----------------   96 (327)
Q Consensus        33 dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~----------------   96 (327)
                      .+.+.++|+.+++....... ...+....|+|+|+.++... ++.|.+++..+++..+.-..+.                
T Consensus        22 ~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv   99 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEV   99 (353)
T ss_dssp             EEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHT
T ss_pred             ceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccc
Confidence            46789999998765544433 66788999999999998776 5689999987775544331220                


Q ss_pred             cCCceeeEEEecCCCEEEEEeCCC-C-----------------------------------EEEEEcCCCceeeeeeccc
Q psy7482          97 KGTAVNHISIHPSGKLALSVGKDK-T-----------------------------------LRTWNLVKGRSAYITNLSS  140 (327)
Q Consensus        97 ~~~~v~~~~~~~~~~~l~~~~~dg-~-----------------------------------i~iwd~~~~~~~~~~~~~~  140 (327)
                      .+. -..+-|+||+++|+....|. .                                   +.++|+.+++.........
T Consensus       100 ~~~-~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~  178 (353)
T PF00930_consen  100 FDR-RSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNS  178 (353)
T ss_dssp             SSS-SBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HH
T ss_pred             ccc-ccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccc
Confidence            112 35688999999888765432 1                                   4445555544322111100


Q ss_pred             cCccccceEEEEEccCCcEEEe-ec--C---CeEEEEEecCCceeeEec--CCCce---eEEEee-cC--ceEEEeCCCC
Q psy7482         141 YGVGFENLDSVVWSPEGLLYAI-PI--Q---NKAVVFSVEKAGVLQTLK--SESKV---HSVCFL-NE--TTVCTGNEES  206 (327)
Q Consensus       141 ~~~~~~~v~~~~~~~~~~~l~~-~~--~---~~i~i~d~~~~~~~~~~~--~~~~i---~~~~~~-~~--~~l~~~~~d~  206 (327)
                      .......+..+.|.++++.+++ -.  +   -.+.++|..+++......  ....+   ....+. ++  .++.....+|
T Consensus       179 ~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G  258 (353)
T PF00930_consen  179 LNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG  258 (353)
T ss_dssp             HHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS
T ss_pred             cCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC
Confidence            0111234788999999984443 32  1   256677887765543333  33322   345554 44  5555555777


Q ss_pred             cEEE--EEcCCCceeEEeeecccceEEEEEEecCCCc-EEEEecCC----CeEEEEEcCCCceeEEeecccCceEEEeee
Q psy7482         207 AITA--YNLTDGSHLWQIKASASRIKGLVFFSIPQET-TVCTGNEE----SAITAYNLTDGSHLWHIKASASRIKGLASH  279 (327)
Q Consensus       207 ~i~i--~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  279 (327)
                      .-++  ++...+. ...+....-.|..+.... ++++ ..+++..+    ..|+.-++..+..+..+......-..+.|+
T Consensus       259 ~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d-~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~S  336 (353)
T PF00930_consen  259 YRHLYLYDLDGGK-PRQLTSGDWEVTSILGWD-EDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFS  336 (353)
T ss_dssp             SEEEEEEETTSSE-EEESS-SSS-EEEEEEEE-CTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-
T ss_pred             CcEEEEEcccccc-eeccccCceeecccceEc-CCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEEC
Confidence            5544  4554444 345544555676654442 5544 44556543    356556666234445554443333577888


Q ss_pred             C
Q psy7482         280 R  280 (327)
Q Consensus       280 ~  280 (327)
                      |
T Consensus       337 p  337 (353)
T PF00930_consen  337 P  337 (353)
T ss_dssp             T
T ss_pred             C
Confidence            8

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG1645|consensus

Probab=98.81  E-value=6.4e-07  Score=71.17  Aligned_cols=239  Identities=9%  Similarity=0.053  Sum_probs=142.3

Q ss_pred             eccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCC
Q psy7482          10 THSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus        10 ~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~   85 (327)
                      +.+|...|..++|   +..++..++.+.+|+|.|+++...+..+..+ ..+++++|.-|. .+|..|..+|.|.+||++.
T Consensus       189 lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~  267 (463)
T KOG1645|consen  189 LPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ  267 (463)
T ss_pred             ccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence            4578899999999   4447888999999999999999999888887 789999998754 5778888899999999976


Q ss_pred             CeEE-EeEEec-ccCCceeeEEE------ecCCCEEEEEeCCCCEEEEEcCCC--ceeeeeeccccCccccceEEEEEcc
Q psy7482          86 WQLE-KLFKKA-HKGTAVNHISI------HPSGKLALSVGKDKTLRTWNLVKG--RSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        86 ~~~~-~~~~~~-~~~~~v~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      .+-. ..+ .+ ....||..++.      .+.+.+++....+  +..|++.-.  ......+....    +...++...+
T Consensus       268 ~~~~~~e~-~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~p----G~cismqy~~  340 (463)
T KOG1645|consen  268 PEGPLMEL-VANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPP----GICISMQYHG  340 (463)
T ss_pred             CCchHhhh-hhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCC----cceeeeeecC
Confidence            4322 222 11 11122444332      2334445444433  566665432  22222222222    2255566666


Q ss_pred             CCcEEEeec--CC---e---EE-EEEecCCceeeEec--C-CCce------eEEEeecC-ce-EEEeCCCCcEEEEEcCC
Q psy7482         156 EGLLYAIPI--QN---K---AV-VFSVEKAGVLQTLK--S-ESKV------HSVCFLNE-TT-VCTGNEESAITAYNLTD  215 (327)
Q Consensus       156 ~~~~l~~~~--~~---~---i~-i~d~~~~~~~~~~~--~-~~~i------~~~~~~~~-~~-l~~~~~d~~i~i~d~~~  215 (327)
                      ..+.++...  +.   +   +. --|..+|.++..-+  + .++-      ..+.-.++ ++ +.++...+.+.+||..+
T Consensus       341 ~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s  420 (463)
T KOG1645|consen  341 VSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHS  420 (463)
T ss_pred             ccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEeccch
Confidence            444444332  11   1   11 11223333332221  1 1110      11111233 33 44567788999999999


Q ss_pred             CceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         216 GSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                      .+.++++... .++.+++......+.+|++- .|..++||..+
T Consensus       421 ~evvQ~l~~~-epv~Dicp~~~n~~syLa~L-Td~~v~Iyk~e  461 (463)
T KOG1645|consen  421 FEVVQTLALS-EPVLDICPNDTNGSSYLALL-TDDRVHIYKNE  461 (463)
T ss_pred             hheeeecccC-cceeecceeecCCcchhhhe-ecceEEEEecC
Confidence            9999988754 78999988753344555555 45678887654

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.81  E-value=2.7e-06  Score=73.06  Aligned_cols=216  Identities=11%  Similarity=0.029  Sum_probs=129.4

Q ss_pred             CCCEEEEecC-CCeEEEEEcccccccccccc-ccccEEEEE-------------------ECCCCCeEEEe-cCCCcEEE
Q psy7482          23 TSKLAASSGA-DETVVLYDMVKRKQSGALMQ-HEGTITCLK-------------------FTPEGSHLISC-SDDGSIAI   80 (327)
Q Consensus        23 ~~~~l~~~~~-dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~-------------------~~~~~~~l~~~-~~d~~i~i   80 (327)
                      ||++|..-.. +..|-.-++...+.-+.+.- ....+..++                   +.|||+.+... -..+.+.+
T Consensus       140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSv  219 (635)
T PRK02888        140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTA  219 (635)
T ss_pred             ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEE
Confidence            7888887663 45565556655543332221 111222222                   33455444322 22456777


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC----------------------------------------CC
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK----------------------------------------DK  120 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------------------------------------dg  120 (327)
                      .|.++.+....+..+.  . ...++++++|+++++.+.                                        ++
T Consensus       220 ID~etmeV~~qV~Vdg--n-pd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn  296 (635)
T PRK02888        220 VDAETMEVAWQVMVDG--N-LDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGS  296 (635)
T ss_pred             EECccceEEEEEEeCC--C-cccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCC
Confidence            7888777666653322  2 456788888888877751                                        13


Q ss_pred             CEEEEEcCC-----CceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCce------------eeE
Q psy7482         121 TLRTWNLVK-----GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGV------------LQT  181 (327)
Q Consensus       121 ~i~iwd~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~------------~~~  181 (327)
                      .|.+.|..+     .+....++....      ...+.++|||+++++++  ++++.++|+.+.+.            ...
T Consensus       297 ~V~VID~~t~~~~~~~v~~yIPVGKs------PHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvae  370 (635)
T PRK02888        297 KVPVVDGRKAANAGSALTRYVPVPKN------PHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAE  370 (635)
T ss_pred             EEEEEECCccccCCcceEEEEECCCC------ccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEe
Confidence            466777665     234444444444      77899999999988876  89999999988653            344


Q ss_pred             ecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCC----------CceeEEeeecccceEEEEE---EecCCCcEEEEec
Q psy7482         182 LKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTD----------GSHLWQIKASASRIKGLVF---FSIPQETTVCTGN  247 (327)
Q Consensus       182 ~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~----------~~~~~~~~~~~~~v~~~~~---~~s~~~~~l~~~~  247 (327)
                      .+........+|.++ ..+.+-.-|..|..||+..          ...+.++..|-.+-.-.+-   ...++|++|++..
T Consensus       371 vevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~n  450 (635)
T PRK02888        371 PELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSLN  450 (635)
T ss_pred             eccCCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEcc
Confidence            444445567788888 5666777899999999876          2344444444332221110   0137888888764

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.81  E-value=2.9e-08  Score=53.23  Aligned_cols=39  Identities=28%  Similarity=0.582  Sum_probs=35.5

Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN  126 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  126 (327)
                      ++++..+ .+|.+. |.+++|+|++.+|++++.|+.|++||
T Consensus         1 g~~~~~~-~~h~~~-i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTF-RGHSSS-INSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEE-ESSSSS-EEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEE-cCCCCc-EEEEEEecccccceeeCCCCEEEEEC
Confidence            3567778 888888 99999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.79  E-value=1.3e-05  Score=68.93  Aligned_cols=223  Identities=13%  Similarity=0.124  Sum_probs=138.5

Q ss_pred             EEEecCCCeEEEEEcccccccccccc-------------ccccE---------------E--EEEEC---CCCCeEEEec
Q psy7482          27 AASSGADETVVLYDMVKRKQSGALMQ-------------HEGTI---------------T--CLKFT---PEGSHLISCS   73 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~~~~~~~~~~-------------~~~~v---------------~--~~~~~---~~~~~l~~~~   73 (327)
                      |.+|+..|.|+|+-+.+++.+..+.-             .+..|               .  .+.+.   .||++|+.-.
T Consensus        69 f~SgG~sG~~~v~G~PSmr~l~~ipvf~~~~~~G~G~~~esk~~l~~~~~~~~~~~gD~HHp~~s~t~g~ydGr~~find  148 (635)
T PRK02888         69 FWSGGHSGEVRILGLPSMRELMRIPVFNRDSATGWGITNESKKVLGEGARGGKYLNGDTHHPHMSFTDGTYDGRYLFIND  148 (635)
T ss_pred             EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHhhccccCCcccCCCcCCCcccccCCccceeEEEEec
Confidence            67899999999999988766543311             00011               1  11111   1567777765


Q ss_pred             C-CCcEEEEEcCCCeEEEeEEecccCCceeeEEEe--cCCCEEEEEeC------------------CCCEEEEEcCCCce
Q psy7482          74 D-DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH--PSGKLALSVGK------------------DKTLRTWNLVKGRS  132 (327)
Q Consensus        74 ~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~------------------dg~i~iwd~~~~~~  132 (327)
                      . +..|...+++..+..+.+....... +..+.+.  |+..+++.+++                  .+.+.+.|.++.+.
T Consensus       149 k~n~Rvari~l~~~~~~~i~~iPn~~~-~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvID~etmeV  227 (635)
T PRK02888        149 KANTRVARIRLDVMKCDKITELPNVQG-IHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAVDAETMEV  227 (635)
T ss_pred             CCCcceEEEECccEeeceeEeCCCccC-ccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEEECccceE
Confidence            4 5566666766666555543222222 4444443  44444444432                  34566677776665


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec-----------------------------------------CCeEEEE
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-----------------------------------------QNKAVVF  171 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------------------------------------~~~i~i~  171 (327)
                      .........      ...+.++|+|+++.+.+                                         ++.|.+.
T Consensus       228 ~~qV~Vdgn------pd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V~VI  301 (635)
T PRK02888        228 AWQVMVDGN------LDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKVPVV  301 (635)
T ss_pred             EEEEEeCCC------cccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEEEEE
Confidence            555555443      44566677766655442                                         2457788


Q ss_pred             EecC-----CceeeEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCce------------eEEeeecccceEEE
Q psy7482         172 SVEK-----AGVLQTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSH------------LWQIKASASRIKGL  232 (327)
Q Consensus       172 d~~~-----~~~~~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~------------~~~~~~~~~~v~~~  232 (327)
                      |.++     .+.+..+.-......+.++|| .+ ++++..+.++.++|+.+.+.            +.+.+...+ ....
T Consensus       302 D~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlG-PLHT  380 (635)
T PRK02888        302 DGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLG-PLHT  380 (635)
T ss_pred             ECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCC-cceE
Confidence            8777     456666777778889999999 44 45566799999999987553            333333333 3345


Q ss_pred             EEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         233 VFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      +|  +++|....+-.-|..|..||+..
T Consensus       381 aF--Dg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        381 AF--DGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             EE--CCCCCEEEeEeecceeEEEehHH
Confidence            67  48888888888999999999876

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.79  E-value=8.1e-06  Score=68.84  Aligned_cols=220  Identities=16%  Similarity=0.220  Sum_probs=118.1

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      .......+.++|+|+++++ +.||.-.++.....+... .     +. -....|.+++ .+++-...+.|.++.--+.+.
T Consensus        31 ~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~-~-----G~-g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~  101 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKA-F-----GS-GLSFVWSSRN-RYAVLESSSTIKIYKNFKNEV  101 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEE-E-----EE--SEEEE-TSS-EEEEE-TTS-EEEEETTEE-T
T ss_pred             CCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCcccc-c-----Cc-eeEEEEecCc-cEEEEECCCeEEEEEcCcccc
Confidence            3445788999999999888 557788888854433322 1     22 4557888855 466666688899974222222


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEE
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAY  211 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~  211 (327)
                      ...+..+..      +..+-.   |.+|...+++.|.+||..+++.+..+.... |..+.|+++ .+++..+ +..+.++
T Consensus       102 ~k~i~~~~~------~~~If~---G~LL~~~~~~~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t-~~~i~il  170 (443)
T PF04053_consen  102 VKSIKLPFS------VEKIFG---GNLLGVKSSDFICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVT-KDSIYIL  170 (443)
T ss_dssp             T-----SS-------EEEEE----SSSEEEEETTEEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE--S-SEEEE
T ss_pred             ceEEcCCcc------cceEEc---CcEEEEECCCCEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEe-CCeEEEE
Confidence            223333322      333332   888888888899999999999999998554 899999999 5555554 5578887


Q ss_pred             EcCCC-----------ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC
Q psy7482         212 NLTDG-----------SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       212 d~~~~-----------~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                      +....           .....+..-...|.+.+|.  .+ -++.+.. . .++.  +.+|+ ...+..-..+++=+.+.+
T Consensus       171 ~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~--~d-~fiYtT~-~-~lkY--l~~Ge-~~~i~~ld~~~yllgy~~  242 (443)
T PF04053_consen  171 KYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWV--ED-CFIYTTS-N-HLKY--LVNGE-TGIIAHLDKPLYLLGYLP  242 (443)
T ss_dssp             EE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEE--TT-EEEEE-T-T-EEEE--EETTE-EEEEEE-SS--EEEEEET
T ss_pred             EecchhcccccccCchhceEEEEEecceeEEEEEE--cC-EEEEEcC-C-eEEE--EEcCC-cceEEEcCCceEEEEEEc
Confidence            75433           0233333325678888884  23 3333333 2 6665  33443 222222234667777777


Q ss_pred             --cEEEEEecCCcEEEEEccCc
Q psy7482         281 --NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 --~~l~~~~~dg~v~iw~~~~~  300 (327)
                        +.+.....|+.+..+.++..
T Consensus       243 ~~~~ly~~Dr~~~v~~~~ld~~  264 (443)
T PF04053_consen  243 KENRLYLIDRDGNVISYELDLS  264 (443)
T ss_dssp             TTTEEEEE-TT--EEEEE--HH
T ss_pred             cCCEEEEEECCCCEEEEEECHH
Confidence              88888888988888877654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.78  E-value=4.2e-05  Score=60.98  Aligned_cols=241  Identities=11%  Similarity=0.141  Sum_probs=140.6

Q ss_pred             EeCCCEEEEec----------CCCeEEEEEcccccccccccccc-------ccEEEEEECCCCCeEEEe--cCCCcEEEE
Q psy7482          21 AATSKLAASSG----------ADETVVLYDMVKRKQSGALMQHE-------GTITCLKFTPEGSHLISC--SDDGSIAIF   81 (327)
Q Consensus        21 ~~~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~--~~d~~i~iw   81 (327)
                      +.+++.+++++          ..-.|.+||..+..+...+.-..       .....++++.|+++++..  +-..+|.|-
T Consensus        44 spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVV  123 (342)
T PF06433_consen   44 SPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVV  123 (342)
T ss_dssp             -TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEE
T ss_pred             CCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEE
Confidence            33777776643          23458999999876655433211       122345778888877764  334678889


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcC-CCceeeeeeccccCccccc-eEEEEEccC-Cc
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV-KGRSAYITNLSSYGVGFEN-LDSVVWSPE-GL  158 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~-v~~~~~~~~-~~  158 (327)
                      |+..++.+..+.   ... ...+--. ..+-+.+-|.||.+.-..+. .|+...... .......++ +..-++... +.
T Consensus       124 Dl~~~kvv~ei~---~PG-C~~iyP~-~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t-~~F~~~~dp~f~~~~~~~~~~~  197 (342)
T PF06433_consen  124 DLAAKKVVGEID---TPG-CWLIYPS-GNRGFSMLCGDGSLLTVTLDADGKEAQKST-KVFDPDDDPLFEHPAYSRDGGR  197 (342)
T ss_dssp             ETTTTEEEEEEE---GTS-EEEEEEE-ETTEEEEEETTSCEEEEEETSTSSEEEEEE-EESSTTTS-B-S--EEETTTTE
T ss_pred             ECCCCceeeeec---CCC-EEEEEec-CCCceEEEecCCceEEEEECCCCCEeEeec-cccCCCCcccccccceECCCCe
Confidence            999888887772   111 2222212 23458888899999999987 455542221 111111122 223344433 45


Q ss_pred             EEEeecCCeEEEEEecCCceee--Eec-----------CCCceeEEEeecC-ceEEEeC---CC-------CcEEEEEcC
Q psy7482         159 LYAIPIQNKAVVFSVEKAGVLQ--TLK-----------SESKVHSVCFLNE-TTVCTGN---EE-------SAITAYNLT  214 (327)
Q Consensus       159 ~l~~~~~~~i~i~d~~~~~~~~--~~~-----------~~~~i~~~~~~~~-~~l~~~~---~d-------~~i~i~d~~  214 (327)
                      ++....+|.|+-.|+.......  .+.           ..+.-.-+++++. ++|.+.-   .+       ..|.++|+.
T Consensus       198 ~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~  277 (342)
T PF06433_consen  198 LYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLK  277 (342)
T ss_dssp             EEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETT
T ss_pred             EEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECC
Confidence            6666779999999987665322  221           1233455777765 5544421   11       148889999


Q ss_pred             CCceeEEeeecccceEEEEEEecCCCcEEEE-ecCCCeEEEEEcCCCceeEEeecc
Q psy7482         215 DGSHLWQIKASASRIKGLVFFSIPQETTVCT-GNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                      +++.+.++... .++.+|.... .+..+|++ ...++.+.+||..+|+.+.+++.-
T Consensus       278 t~krv~Ri~l~-~~~~Si~Vsq-d~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~l  331 (342)
T PF06433_consen  278 THKRVARIPLE-HPIDSIAVSQ-DDKPLLYALSAGDGTLDVYDAATGKLVRSIEQL  331 (342)
T ss_dssp             TTEEEEEEEEE-EEESEEEEES-SSS-EEEEEETTTTEEEEEETTT--EEEEE---
T ss_pred             CCeEEEEEeCC-CccceEEEcc-CCCcEEEEEcCCCCeEEEEeCcCCcEEeehhcc
Confidence            99999988743 4577888863 33345544 456899999999999999888743

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.77  E-value=8.2e-05  Score=64.87  Aligned_cols=244  Identities=14%  Similarity=0.122  Sum_probs=146.6

Q ss_pred             EeCCCEEEEecCCCeEEEEEcccccccccccc--ccccEEEEEECC---CCCeEEEec------CCCcEEEEEcCCCeEE
Q psy7482          21 AATSKLAASSGADETVVLYDMVKRKQSGALMQ--HEGTITCLKFTP---EGSHLISCS------DDGSIAIFRVGSWQLE   89 (327)
Q Consensus        21 ~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~--~~~~v~~~~~~~---~~~~l~~~~------~d~~i~iw~~~~~~~~   89 (327)
                      ++.+..++.++.|+.+.-.|..+|+.+.....  +... ..+.-+|   ++ .++++.      .+|.|.-+|.++|+.+
T Consensus       117 av~~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~-~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~l  194 (527)
T TIGR03075       117 ALYDGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAG-YTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLV  194 (527)
T ss_pred             eEECCEEEEEcCCCEEEEEECCCCCEEeeccccccccc-ccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCcee
Confidence            44445677788899999999999998766542  1110 0111122   34 455443      2688999999999887


Q ss_pred             EeEEecccC-----------------------------Ccee-eEEEecCCCEEEEEeCC-----C-----------CEE
Q psy7482          90 KLFKKAHKG-----------------------------TAVN-HISIHPSGKLALSVGKD-----K-----------TLR  123 (327)
Q Consensus        90 ~~~~~~~~~-----------------------------~~v~-~~~~~~~~~~l~~~~~d-----g-----------~i~  123 (327)
                      -.+......                             ..+. .+.+.+...+++.+..+     +           .|.
T Consensus       195 W~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~v  274 (527)
T TIGR03075       195 WRRYTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIV  274 (527)
T ss_pred             EeccCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEE
Confidence            765322111                             0011 23566656666665421     2           677


Q ss_pred             EEEcCCCceeeeeeccccCccc----cceEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEec------------
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGF----ENLDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLK------------  183 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~------------  183 (327)
                      -.|+++|+....+....+....    ....-+....+|+   .++.+. +|.++++|.++++.+...+            
T Consensus       275 Ald~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~  354 (527)
T TIGR03075       275 ARDPDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVD  354 (527)
T ss_pred             EEccccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccC
Confidence            8899999988877665442111    1122233334665   666666 8999999999998762210            


Q ss_pred             CC--Cce----------------------------eEEEeecC-ceEEEeCC----------------------------
Q psy7482         184 SE--SKV----------------------------HSVCFLNE-TTVCTGNE----------------------------  204 (327)
Q Consensus       184 ~~--~~i----------------------------~~~~~~~~-~~l~~~~~----------------------------  204 (327)
                      ..  .++                            ..++++|+ +++++...                            
T Consensus       355 ~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p  434 (527)
T TIGR03075       355 LKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKP  434 (527)
T ss_pred             CCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCC
Confidence            00  000                            11455665 44443322                            


Q ss_pred             -----CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482         205 -----ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       205 -----d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                           -|.+.-+|+.+++.+.+.+.......+...   ..+.+++.++.+|.++.+|.++|+.+..++..
T Consensus       435 ~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~---t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g  501 (527)
T TIGR03075       435 PPDDHMGSLIAWDPITGKIVWEHKEDFPLWGGVLA---TAGDLVFYGTLEGYFKAFDAKTGEELWKFKTG  501 (527)
T ss_pred             CCCCCceeEEEEeCCCCceeeEecCCCCCCCcceE---ECCcEEEEECCCCeEEEEECCCCCEeEEEeCC
Confidence                 245778888888887776533222222211   34557777888999999999999999988754

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>KOG1008|consensus

Probab=98.76  E-value=2.2e-09  Score=89.61  Aligned_cols=195  Identities=14%  Similarity=0.222  Sum_probs=134.1

Q ss_pred             CccEEEEEe----CCCEEEEecCCCeEEEEEcccccc--ccccccccccEEEEEECC-CCCeEEEec----CCCcEEEEE
Q psy7482          14 TASVRSVAA----TSKLAASSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTP-EGSHLISCS----DDGSIAIFR   82 (327)
Q Consensus        14 ~~~v~~~~~----~~~~l~~~~~dg~v~~w~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~----~d~~i~iw~   82 (327)
                      ...+.|++.    +..+++.|..+|.|-+-.+.....  .....++....++++|++ |.+.||.|-    .|..+.|||
T Consensus        56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd  135 (783)
T KOG1008|consen   56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD  135 (783)
T ss_pred             CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence            445677777    446889999999999988765432  234556888999999998 566777763    356799999


Q ss_pred             cCCC--eE--EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CC
Q psy7482          83 VGSW--QL--EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EG  157 (327)
Q Consensus        83 ~~~~--~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~  157 (327)
                      +.++  .+  ...+..+.... ..+++|..+.+++.+|.....++++|++..... ...+.     +..+..+..+| .+
T Consensus       136 i~s~ltvPke~~~fs~~~l~g-qns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~-~~svn-----Tk~vqG~tVdp~~~  208 (783)
T KOG1008|consen  136 INSLLTVPKESPLFSSSTLDG-QNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDS-VSSVN-----TKYVQGITVDPFSP  208 (783)
T ss_pred             cccccCCCccccccccccccC-ccccccccCcchhhcccccchhhhhhhhhhhhh-hhhhh-----hhhcccceecCCCC
Confidence            9876  22  22231212233 678899988899999998899999999843211 11111     12266778888 77


Q ss_pred             cEEEeecCCeEEEEE-ecCCc-eeeEecC-----CCceeEEEeecC--ceEEEeC-CCCcEEEEEcCC
Q psy7482         158 LLYAIPIQNKAVVFS-VEKAG-VLQTLKS-----ESKVHSVCFLNE--TTVCTGN-EESAITAYNLTD  215 (327)
Q Consensus       158 ~~l~~~~~~~i~i~d-~~~~~-~~~~~~~-----~~~i~~~~~~~~--~~l~~~~-~d~~i~i~d~~~  215 (327)
                      .+++...||.|.+|| .++-+ ++..+.+     ...+..++|.|-  +.+++.. ..++|++||+..
T Consensus       209 nY~cs~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  209 NYFCSNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             CceeccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence            888888899999999 33322 2222222     235899999996  6776655 567899999853

>KOG1008|consensus

Probab=98.75  E-value=4.2e-09  Score=88.07  Aligned_cols=240  Identities=12%  Similarity=0.129  Sum_probs=144.6

Q ss_pred             ccEEEEEECCC--CCeEEEecCCCcEEEEEcCCCeEE-EeEEecccCCceeeEEEec-CCCEEEEEe----CCCCEEEEE
Q psy7482          55 GTITCLKFTPE--GSHLISCSDDGSIAIFRVGSWQLE-KLFKKAHKGTAVNHISIHP-SGKLALSVG----KDKTLRTWN  126 (327)
Q Consensus        55 ~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----~dg~i~iwd  126 (327)
                      ..+.|+++.-+  ...+++|..+|.|.+-.++...-. ..+..++... .++++|++ |.+.|++|-    .|..+.|||
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~-Ct~lAwneLDtn~LAagldkhrnds~~~Iwd  135 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARP-CTSLAWNELDTNHLAAGLDKHRNDSSLKIWD  135 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceeccccccc-ccccccccccHHHHHhhhhhhcccCCcccee
Confidence            34667776553  347888999999999887654332 4443555555 99999999 666777663    366899999


Q ss_pred             cCCC--ceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeec-C-ceEEE
Q psy7482         127 LVKG--RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLN-E-TTVCT  201 (327)
Q Consensus       127 ~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~  201 (327)
                      +.++  .+.....+...  ......+++|..+.+++.+|. ...+.++|++........-....+..+...| . +++++
T Consensus       136 i~s~ltvPke~~~fs~~--~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs  213 (783)
T KOG1008|consen  136 INSLLTVPKESPLFSSS--TLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCS  213 (783)
T ss_pred             cccccCCCccccccccc--cccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceec
Confidence            9876  22222222221  123366889998888888887 6799999988432222111233456667777 4 55555


Q ss_pred             eCCCCcEEEEE-cCCCc-eeEEeeecc----cceEEEEEEecCCCcEEEEec-CCCeEEEEEcCCCc--------eeE--
Q psy7482         202 GNEESAITAYN-LTDGS-HLWQIKASA----SRIKGLVFFSIPQETTVCTGN-EESAITAYNLTDGS--------HLW--  264 (327)
Q Consensus       202 ~~~d~~i~i~d-~~~~~-~~~~~~~~~----~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~--------~~~--  264 (327)
                      - .||.|.+|| .++-+ ++..+...+    ..+..++|+|.. ...+++.. ..++|+++|+..-.        ...  
T Consensus       214 ~-~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtr-tglla~l~RdS~tIrlydi~~v~t~~s~nn~~~~~~  291 (783)
T KOG1008|consen  214 N-SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTR-TGLLAVLSRDSITIRLYDICVVGTEGSANNSVFVNY  291 (783)
T ss_pred             c-ccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCC-cchhhhhccCcceEEEecccccCCcccccccceeee
Confidence            4 599999999 33322 222222122    248899998744 34455544 45789999975310        111  


Q ss_pred             ----Eeeccc--CceEEEeeeC----cEEEEEecCCcEEEEEccC
Q psy7482         265 ----HIKASA--SRIKGLASHR----NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       265 ----~~~~~~--~~v~~~~~~~----~~l~~~~~dg~v~iw~~~~  299 (327)
                          .++...  ..|....|++    ...+.+-..-.+.-+++..
T Consensus       292 ~s~~~~q~~~~~s~I~~f~wH~~s~~er~il~~~nl~~~Df~V~e  336 (783)
T KOG1008|consen  292 ESKYPVQPNSQCSGIDFFTWHTASPTERQILGVINLQPKDFSVHE  336 (783)
T ss_pred             cccccccccccccceeecCcCcCCccceeEEeeccCChhhccchh
Confidence                122112  4677777776    4455555555555555444

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.75  E-value=5.1e-05  Score=60.83  Aligned_cols=221  Identities=14%  Similarity=0.210  Sum_probs=133.3

Q ss_pred             CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeee---cc--
Q psy7482          65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN---LS--  139 (327)
Q Consensus        65 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~--  139 (327)
                      .++.|+.|+.+| +.+++..........  .+... |..+...|+-+.+++-+ |+.+.++++..-.......   ..  
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i--~~~~~-I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~   80 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSDPSKPTRI--LKLSS-ITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS   80 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecCCccceeE--eecce-EEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence            577899999888 999998333222222  12233 99999998777666654 5999999987654433111   00  


Q ss_pred             ----ccCccccceEEEE---EccCCcEEEeecCCeEEEEEecCC-----ceeeEecCCCceeEEEeecCceEEEeCCCCc
Q psy7482         140 ----SYGVGFENLDSVV---WSPEGLLYAIPIQNKAVVFSVEKA-----GVLQTLKSESKVHSVCFLNETTVCTGNEESA  207 (327)
Q Consensus       140 ----~~~~~~~~v~~~~---~~~~~~~l~~~~~~~i~i~d~~~~-----~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~  207 (327)
                          ..-.....+...+   -......++++....|.+|.....     +..+.+.....+..++|.+ +.++.|.. ..
T Consensus        81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~~-~~i~v~~~-~~  158 (275)
T PF00780_consen   81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFLG-NKICVGTS-KG  158 (275)
T ss_pred             ccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEeC-CEEEEEeC-Cc
Confidence                0000111244444   222345667777889999887653     4566677789999999995 45555554 45


Q ss_pred             EEEEEcCCCceeEEeeec------------ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE--EeecccCce
Q psy7482         208 ITAYNLTDGSHLWQIKAS------------ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW--HIKASASRI  273 (327)
Q Consensus       208 i~i~d~~~~~~~~~~~~~------------~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v  273 (327)
                      ..+.|+.++.....+...            ..++..+..   +++.+|++.  |..-.+.| ..|++..  .+. -...+
T Consensus       159 f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~e~Ll~~--~~~g~fv~-~~G~~~r~~~i~-W~~~p  231 (275)
T PF00780_consen  159 FYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL---SDNEFLLCY--DNIGVFVN-KNGEPSRKSTIQ-WSSAP  231 (275)
T ss_pred             eEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe---CCceEEEEe--cceEEEEc-CCCCcCcccEEE-cCCch
Confidence            788899876554333211            123333333   566777654  23333333 3454333  222 23356


Q ss_pred             EEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         274 KGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       274 ~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .++++...+|+..+.+ .|.||++.++
T Consensus       232 ~~~~~~~pyli~~~~~-~iEV~~~~~~  257 (275)
T PF00780_consen  232 QSVAYSSPYLIAFSSN-SIEVRSLETG  257 (275)
T ss_pred             hEEEEECCEEEEECCC-EEEEEECcCC
Confidence            7777777888877765 4999999999

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG3617|consensus

Probab=98.73  E-value=1.7e-06  Score=75.33  Aligned_cols=287  Identities=11%  Similarity=0.099  Sum_probs=157.9

Q ss_pred             CCCEEEEec----CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccC
Q psy7482          23 TSKLAASSG----ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG   98 (327)
Q Consensus        23 ~~~~l~~~~----~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~   98 (327)
                      ...++|+++    ..|.|.||- ++|++.+... -.-.+++++|+|..-.|+.|-.-|.+.+|...+.+. ++....|..
T Consensus        26 sePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~-htv~~th~a  102 (1416)
T KOG3617|consen   26 SEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTET-HTVVETHPA  102 (1416)
T ss_pred             CCceeEEEEecCCCCceEEEEe-cCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCcee-eeeccCCCC
Confidence            677888775    468899885 5677554332 122356799999988899999999999999876554 444367777


Q ss_pred             CceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc-ccceEEEEEccCCc------EEEe-ecCCeEE-
Q psy7482          99 TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG-FENLDSVVWSPEGL------LYAI-PIQNKAV-  169 (327)
Q Consensus        99 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~------~l~~-~~~~~i~-  169 (327)
                      . |..+.|+++|..++++..-|.+.+|.......++..++-.+... .-...|...++++.      ..++ |.+..+- 
T Consensus       103 ~-i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~  181 (1416)
T KOG3617|consen  103 P-IQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDE  181 (1416)
T ss_pred             C-ceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhhhcc
Confidence            7 99999999999999999999999998764333332222222110 11144555666642      1222 2233322 


Q ss_pred             EEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeec----------ccceEEE------
Q psy7482         170 VFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKAS----------ASRIKGL------  232 (327)
Q Consensus       170 i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----------~~~v~~~------  232 (327)
                      .++.+.........+.+       .|+ ..++.++.+|+|+..|-. ++.....+..          ...+..+      
T Consensus       182 ~fnwk~~~a~rs~~ksg-------v~~g~~F~~~~~~GtVyyvdq~-g~~~~V~k~dS~vQmLf~~~~eai~~i~e~lr~  253 (1416)
T KOG3617|consen  182 PFNWKESLAERSDEKSG-------VPKGTEFLFAGKSGTVYYVDQN-GRQRTVHKLDSEVQMLFMGYCEAISIIIEFLRD  253 (1416)
T ss_pred             cccCccchhhccccccC-------CCCCcEEEEEcCCceEEEEcCC-CcEEEEEEccchHHHHHhcccceEEEEeeecee
Confidence            22221111111111111       234 457778888988877743 3332222211          1112111      


Q ss_pred             --EEEecCCCcE---------EEEecCCCeEEEEEcCCCc----eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEE
Q psy7482         233 --VFFSIPQETT---------VCTGNEESAITAYNLTDGS----HLWHIKASASRIKGLASHR--NHLICITSAGDLVVW  295 (327)
Q Consensus       233 --~~~~s~~~~~---------l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw  295 (327)
                        -+.+ +.|..         --.|+..|.|.+-.. .|-    +-.-+ .....++++++..  ..|+.|...|++.+|
T Consensus       254 ~l~~v~-~~G~~ee~~~vk~sgk~GgrqGgiA~sEs-sGvLr~~eKyg~-e~ge~~~c~cY~~~~~~l~agt~~gnv~~w  330 (1416)
T KOG3617|consen  254 CLIFVL-AKGTSEERCAVKVSGKLGGRQGGIACSES-SGVLRKSEKYGL-ELGEGILCMCYGEKEIRLWAGTKEGNVTIW  330 (1416)
T ss_pred             eEEEec-CCCchHHhhhhhhccccCCccCccccccc-cccccCCcchhh-hcCCceEEEEEeccceEEEecccCCcEEEe
Confidence              1111 11110         001222233222211 110    00011 1234789999998  888999999999999


Q ss_pred             EccCc-cC-----CCceeeeecCCCCceEEEEeCC
Q psy7482         296 ELNED-VT-----REPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       296 ~~~~~-~~-----~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                      .-... ..     ..+..-......+.|+.+.|.|
T Consensus       331 ~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~  365 (1416)
T KOG3617|consen  331 LDVNKGFQGDPTIDVWTLNGKRESLGKISLIRWGP  365 (1416)
T ss_pred             eecCccccCCCCcceEEecCchhhccceEEEEecc
Confidence            64333 11     1111122223446799999987

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.70  E-value=6.4e-05  Score=58.22  Aligned_cols=202  Identities=11%  Similarity=0.148  Sum_probs=118.1

Q ss_pred             eeeeccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccc-cccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482           7 TFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      ...+.+-...+..++|   ++.++++....+.|.-.+. +|+.++.+.-. .+..-.+++..++.++++--.++.+.+++
T Consensus        14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~   92 (248)
T PF06977_consen   14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT   92 (248)
T ss_dssp             EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred             eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence            4455676777999999   3557788888899988886 47777666532 35578889988887777776789999998


Q ss_pred             cCCCe------EEEeEEec----ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC---Cceeeeee---ccccCcccc
Q psy7482          83 VGSWQ------LEKLFKKA----HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK---GRSAYITN---LSSYGVGFE  146 (327)
Q Consensus        83 ~~~~~------~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~---~~~~~~~~~  146 (327)
                      +....      ....+..+    +... +-.++|.+.++.|+.+-+.....++.+..   ........   .........
T Consensus        93 ~~~~~~~~~~~~~~~~~l~~~~~~N~G-~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (248)
T PF06977_consen   93 IDDDTTSLDRADVQKISLGFPNKGNKG-FEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVR  171 (248)
T ss_dssp             E----TT--EEEEEEEE---S---SS---EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS
T ss_pred             EeccccccchhhceEEecccccCCCcc-eEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceec
Confidence            83321      11222111    2233 88999999888888887777777777654   21111111   111111223


Q ss_pred             ceEEEEEccCC-cEEEeec-CCeEEEEEecCCceeeEecCC----------CceeEEEeecCceEEEeCCCCcEEEE
Q psy7482         147 NLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVLQTLKSE----------SKVHSVCFLNETTVCTGNEESAITAY  211 (327)
Q Consensus       147 ~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~~~~----------~~i~~~~~~~~~~l~~~~~d~~i~i~  211 (327)
                      .+.+++++|.. .+++.+. ...+..+| .+|+.+..+...          .+...+++.+++.|...++-+..++|
T Consensus       172 d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f  247 (248)
T PF06977_consen  172 DLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF  247 (248)
T ss_dssp             ---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred             cccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence            47899999965 5555555 78898999 678777766522          36789999999888777777766655

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG3621|consensus

Probab=98.68  E-value=2.9e-05  Score=66.52  Aligned_cols=111  Identities=16%  Similarity=0.162  Sum_probs=84.1

Q ss_pred             EEEEEeCCCEEEEecCCCeEEEEEccccccccccc--cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE-----
Q psy7482          17 VRSVAATSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE-----   89 (327)
Q Consensus        17 v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-----   89 (327)
                      -+|++..+++++.|+.-|.+++|+-..++.. .++  +-.+.+..+..+++..++|.|+..|.|.++-+......     
T Consensus        38 lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~-~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~  116 (726)
T KOG3621|consen   38 LTCVDATEEYLAMGSSAGSVYLYNRHTGEMR-KLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYV  116 (726)
T ss_pred             EEEeecCCceEEEecccceEEEEecCchhhh-cccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceee
Confidence            4455558999999999999999997655433 333  24455667778888888999999999999987653321     


Q ss_pred             EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC
Q psy7482          90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  129 (327)
                      ......|... |++++|++++..+++|...|.|..-.+..
T Consensus       117 t~~d~~~~~r-VTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  117 TPCDKSHKCR-VTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             ccccccCCce-EEEEEecccccEEeecCCCceEEEEEech
Confidence            1221234445 99999999999999999999999988876

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.66  E-value=8.7e-05  Score=57.49  Aligned_cols=201  Identities=11%  Similarity=0.172  Sum_probs=111.8

Q ss_pred             ccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEc
Q psy7482          49 ALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL  127 (327)
Q Consensus        49 ~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~  127 (327)
                      .+.+-...+..++|.|+.+ ++++....+.|..++. +|+.++.+.....+. .-.+++..++.++++.-.++.+.++++
T Consensus        16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D-~EgI~y~g~~~~vl~~Er~~~L~~~~~   93 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGD-YEGITYLGNGRYVLSEERDQRLYIFTI   93 (248)
T ss_dssp             E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SS-EEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred             ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCC-ceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence            3445556699999999755 5666777888888886 478888874444455 888999888877776666899999998


Q ss_pred             CCCce------eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecC---CceeeEec---------CCCce
Q psy7482         128 VKGRS------AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEK---AGVLQTLK---------SESKV  188 (327)
Q Consensus       128 ~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~---~~~~~~~~---------~~~~i  188 (327)
                      .....      ...+.+.....+...+..++|+|.++.|.++. ..-..+|.+..   ...+....         ....+
T Consensus        94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  173 (248)
T PF06977_consen   94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDL  173 (248)
T ss_dssp             ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS--
T ss_pred             eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccc
Confidence            43211      11222222223344589999999876666664 44455665543   21111110         23457


Q ss_pred             eEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecc---------cceEEEEEEecCCCcEEEEecCCCeEEEE
Q psy7482         189 HSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASA---------SRIKGLVFFSIPQETTVCTGNEESAITAY  255 (327)
Q Consensus       189 ~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~s~~~~~l~~~~~d~~i~i~  255 (327)
                      .+++++|.  .+++.+..+..+..+| .+|+++..+.-..         ...-.|+|.  ++|++.+++ +-+..++|
T Consensus       174 S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d--~~G~LYIvs-EpNlfy~f  247 (248)
T PF06977_consen  174 SGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFD--PDGNLYIVS-EPNLFYRF  247 (248)
T ss_dssp             -EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE---TT--EEEEE-TTTEEEEE
T ss_pred             cceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEEC--CCCCEEEEc-CCceEEEe
Confidence            88999997  5677788888999999 5677766553222         246678884  677555444 44554443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.64  E-value=6.8e-07  Score=74.75  Aligned_cols=74  Identities=16%  Similarity=0.264  Sum_probs=61.8

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG  130 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  130 (327)
                      ....|.+++++|+.+.|+.|+.||+|.+||...+.....   ...-. ++.++|+|+|..+++|+..|.+.+||+.-.
T Consensus       258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~---ka~~~-P~~iaWHp~gai~~V~s~qGelQ~FD~ALs  331 (545)
T PF11768_consen  258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA---KAEFI-PTLIAWHPDGAIFVVGSEQGELQCFDMALS  331 (545)
T ss_pred             cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee---eeccc-ceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence            677899999999999999999999999999876533322   22222 788999999999999999999999998643

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.62  E-value=6.8e-05  Score=63.39  Aligned_cols=216  Identities=14%  Similarity=0.252  Sum_probs=115.8

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      .....+++  +|++++.++ ||.-.|+.....+..     ..+.-...+|.+.+ .+|+-...++|.++.--+.+....+
T Consensus        33 ~~p~~ls~npngr~v~V~g-~geY~iyt~~~~r~k-----~~G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~~~~k~i  105 (443)
T PF04053_consen   33 IYPQSLSHNPNGRFVLVCG-DGEYEIYTALAWRNK-----AFGSGLSFVWSSRN-RYAVLESSSTIKIYKNFKNEVVKSI  105 (443)
T ss_dssp             S--SEEEE-TTSSEEEEEE-TTEEEEEETTTTEEE-----EEEE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE-TT---
T ss_pred             cCCeeEEECCCCCEEEEEc-CCEEEEEEccCCccc-----ccCceeEEEEecCc-cEEEEECCCeEEEEEcCccccceEE
Confidence            34566777  788888855 888888874332222     23445668899855 4666666888999743322322233


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEE
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFS  172 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d  172 (327)
                      ....  . +..+-.   |.+|...+. +.|.+||..+++.+..+....       |..+.|++++++++..++..+.+++
T Consensus       106 ~~~~--~-~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~~-------vk~V~Ws~~g~~val~t~~~i~il~  171 (443)
T PF04053_consen  106 KLPF--S-VEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDVSA-------VKYVIWSDDGELVALVTKDSIYILK  171 (443)
T ss_dssp             --SS----EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS-E--------EEEEE-TTSSEEEEE-S-SEEEEE
T ss_pred             cCCc--c-cceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEecCC-------CcEEEEECCCCEEEEEeCCeEEEEE
Confidence            2222  1 333322   777777665 489999999998877765442       7899999999999999988888887


Q ss_pred             ecCC-----------ceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482         173 VEKA-----------GVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       173 ~~~~-----------~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      ....           .....+. ....|.+.+|..+ .++-.+.. .++.  +..|+ ...+..-..++.=+.+.  +..
T Consensus       172 ~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fiYtT~~-~lkY--l~~Ge-~~~i~~ld~~~yllgy~--~~~  244 (443)
T PF04053_consen  172 YNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-CFIYTTSN-HLKY--LVNGE-TGIIAHLDKPLYLLGYL--PKE  244 (443)
T ss_dssp             E-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EEEEE-TT-EEEE--EETTE-EEEEEE-SS--EEEEEE--TTT
T ss_pred             ecchhcccccccCchhceEEEEEecceeEEEEEEcC-EEEEEcCC-eEEE--EEcCC-cceEEEcCCceEEEEEE--ccC
Confidence            6543           1233333 3678999999877 33333333 6655  33343 22333334456666664  666


Q ss_pred             cEEEEecCCCeEEEEEcC
Q psy7482         241 TTVCTGNEESAITAYNLT  258 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~  258 (327)
                      +.+.....|+.+..+.+.
T Consensus       245 ~~ly~~Dr~~~v~~~~ld  262 (443)
T PF04053_consen  245 NRLYLIDRDGNVISYELD  262 (443)
T ss_dssp             TEEEEE-TT--EEEEE--
T ss_pred             CEEEEEECCCCEEEEEEC
Confidence            777777778877777654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.59  E-value=8.2e-05  Score=62.04  Aligned_cols=230  Identities=13%  Similarity=0.087  Sum_probs=127.3

Q ss_pred             cEEEEEe--CCCEEEEecCCCeEEEEEccccccc-------------------------------------------ccc
Q psy7482          16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQS-------------------------------------------GAL   50 (327)
Q Consensus        16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~-------------------------------------------~~~   50 (327)
                      .|+.++|  +..-|++|...|.|.||.....+..                                           .-+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            4777888  6677888888999999965432111                                           011


Q ss_pred             ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecc------cCCceeeEEEec-----CC---CEEEEE
Q psy7482          51 MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH------KGTAVNHISIHP-----SG---KLALSV  116 (327)
Q Consensus        51 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~~~-----~~---~~l~~~  116 (327)
                      ....++|++++.+. =-++|.|..+|.+.|.|++....+..-....      ....++++.|.-     |+   -.+++|
T Consensus        83 ~~~~g~vtal~~S~-iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNSD-IGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE-B-TSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecCC-CcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            22357899999974 4489999999999999998887776532111      222377888863     22   368889


Q ss_pred             eCCCCEEEEEcC-CCceeeeeecccc-CccccceEEEE-EccC---------------------CcEEEeecCCeEEEEE
Q psy7482         117 GKDKTLRTWNLV-KGRSAYITNLSSY-GVGFENLDSVV-WSPE---------------------GLLYAIPIQNKAVVFS  172 (327)
Q Consensus       117 ~~dg~i~iwd~~-~~~~~~~~~~~~~-~~~~~~v~~~~-~~~~---------------------~~~l~~~~~~~i~i~d  172 (327)
                      ...|.+.+|.+. ............. ..+.+++..+. ++.+                     ..+++++++..++++.
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~  241 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK  241 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred             eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence            999999999875 2211111111111 11223344443 2211                     1366677789999999


Q ss_pred             ecCCceeeEecCC-CceeEEEeec-----C-ceEEEeCCCCcEEEEEcCCCceeEEeeecc----cceEEEEEEecCCCc
Q psy7482         173 VEKAGVLQTLKSE-SKVHSVCFLN-----E-TTVCTGNEESAITAYNLTDGSHLWQIKASA----SRIKGLVFFSIPQET  241 (327)
Q Consensus       173 ~~~~~~~~~~~~~-~~i~~~~~~~-----~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----~~v~~~~~~~s~~~~  241 (327)
                      ..+.+........ .....+++-+     . ..|++-..+|.+++|.+...+.+...+...    ..+....+  +++|+
T Consensus       242 ~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssi--s~~Gd  319 (395)
T PF08596_consen  242 PPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSI--SRNGD  319 (395)
T ss_dssp             TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-EE---TTS-
T ss_pred             CCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccEE--CCCCC
Confidence            8877765544422 2233344431     2 567778899999999999988887765532    23444555  37777


Q ss_pred             EEEEecC
Q psy7482         242 TVCTGNE  248 (327)
Q Consensus       242 ~l~~~~~  248 (327)
                      .++-.+.
T Consensus       320 i~~~~gp  326 (395)
T PF08596_consen  320 IFYWTGP  326 (395)
T ss_dssp             EEEE-SS
T ss_pred             EEEEeCc
Confidence            6655543

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.53  E-value=0.00031  Score=57.69  Aligned_cols=211  Identities=10%  Similarity=0.172  Sum_probs=126.8

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEec---C----CCEEEEEeC----------CCCEEEEEcCCC----ceee
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP---S----GKLALSVGK----------DKTLRTWNLVKG----RSAY  134 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~---~----~~~l~~~~~----------dg~i~iwd~~~~----~~~~  134 (327)
                      +.|++.|..+.+.+..+....... +.+++...   +    ..+++.|+.          .|.|.++++...    ..+.
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~-~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~   80 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEH-VTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLK   80 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEE-EEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCce-EEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEE
Confidence            368889988888877774443333 66655433   2    457777653          288999999884    1111


Q ss_pred             eeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCc-eeeEec--CCCceeEEEeecCceEEEeCCCCcEEEE
Q psy7482         135 ITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG-VLQTLK--SESKVHSVCFLNETTVCTGNEESAITAY  211 (327)
Q Consensus       135 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~-~~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~  211 (327)
                      ......   ..++|.+++-- ++ .++++.++.+.+|++...+ ....-.  ....+.++.... +++++|.....+.++
T Consensus        81 ~i~~~~---~~g~V~ai~~~-~~-~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~-~~I~vgD~~~sv~~~  154 (321)
T PF03178_consen   81 LIHSTE---VKGPVTAICSF-NG-RLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFK-NYILVGDAMKSVSLL  154 (321)
T ss_dssp             EEEEEE---ESS-EEEEEEE-TT-EEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEET-TEEEEEESSSSEEEE
T ss_pred             EEEEEe---ecCcceEhhhh-CC-EEEEeecCEEEEEEccCcccchhhheecceEEEEEEeccc-cEEEEEEcccCEEEE
Confidence            111111   13448887765 34 4777778999999998887 444333  344666666654 588899888888887


Q ss_pred             EcCC-CceeEEee--ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC-------Cc-eeE-Eeecc-cCceEEE--
Q psy7482         212 NLTD-GSHLWQIK--ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD-------GS-HLW-HIKAS-ASRIKGL--  276 (327)
Q Consensus       212 d~~~-~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~-------~~-~~~-~~~~~-~~~v~~~--  276 (327)
                      ..+. ...+..+.  .....++++.+.  ++++.++.+..+|.+.++....       +. .+. ...-| ...|+++  
T Consensus       155 ~~~~~~~~l~~va~d~~~~~v~~~~~l--~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~  232 (321)
T PF03178_consen  155 RYDEENNKLILVARDYQPRWVTAAEFL--VDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRR  232 (321)
T ss_dssp             EEETTTE-EEEEEEESS-BEEEEEEEE---SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE
T ss_pred             EEEccCCEEEEEEecCCCccEEEEEEe--cCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEE
Confidence            5543 22233332  234467888886  4557999999999999998763       21 221 12212 3466666  


Q ss_pred             -eeeC----------cEEEEEecCCcEEEE
Q psy7482         277 -ASHR----------NHLICITSAGDLVVW  295 (327)
Q Consensus       277 -~~~~----------~~l~~~~~dg~v~iw  295 (327)
                       ...|          ..++.++.+|.|.+.
T Consensus       233 ~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  233 GSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             --SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             EEeeecCCCCcccccceEEEEecCCEEEEE
Confidence             3322          247888889988743

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.46  E-value=0.00063  Score=57.60  Aligned_cols=88  Identities=13%  Similarity=0.280  Sum_probs=69.1

Q ss_pred             EEEEEecCCce----eeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcE
Q psy7482         168 AVVFSVEKAGV----LQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT  242 (327)
Q Consensus       168 i~i~d~~~~~~----~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~  242 (327)
                      -.+|+...++.    +..+..+..+.+++++|+ ..++.|+.||.|.+||...+..  .+....-..+.++|+  |+|..
T Consensus       238 ~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t--~~~ka~~~P~~iaWH--p~gai  313 (545)
T PF11768_consen  238 SCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVT--LLAKAEFIPTLIAWH--PDGAI  313 (545)
T ss_pred             EEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCee--eeeeecccceEEEEc--CCCcE
Confidence            34666655442    234457889999999998 8999999999999999876533  233344567889997  89999


Q ss_pred             EEEecCCCeEEEEEcCC
Q psy7482         243 VCTGNEESAITAYNLTD  259 (327)
Q Consensus       243 l~~~~~d~~i~i~d~~~  259 (327)
                      +++|+..|.+.+||+.-
T Consensus       314 ~~V~s~qGelQ~FD~AL  330 (545)
T PF11768_consen  314 FVVGSEQGELQCFDMAL  330 (545)
T ss_pred             EEEEcCCceEEEEEeec
Confidence            99999999999999754

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.45  E-value=0.00036  Score=58.04  Aligned_cols=256  Identities=14%  Similarity=0.245  Sum_probs=132.5

Q ss_pred             CCCCCeEEEe---------cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee
Q psy7482          63 TPEGSHLISC---------SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA  133 (327)
Q Consensus        63 ~~~~~~l~~~---------~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  133 (327)
                      |||+++++..         +..+.+.++|+++++..... .. ... +....|+|+|+.++... ++.|.+.+..++...
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~-~~-~~~-~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~   76 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLT-PP-PPK-LQDAKWSPDGKYIAFVR-DNNLYLRDLATGQET   76 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS--E-ETT-BSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECc-CC-ccc-cccceeecCCCeeEEEe-cCceEEEECCCCCeE
Confidence            5777776663         23467999999997766654 22 334 88999999999988875 578999998777554


Q ss_pred             eeeeccccC----c-------c-ccceEEEEEccCCcEEEeec--CCeE-------------------------------
Q psy7482         134 YITNLSSYG----V-------G-FENLDSVVWSPEGLLYAIPI--QNKA-------------------------------  168 (327)
Q Consensus       134 ~~~~~~~~~----~-------~-~~~v~~~~~~~~~~~l~~~~--~~~i-------------------------------  168 (327)
                      +...-....    .       . .+.-..+-||||++.|+...  +..+                               
T Consensus        77 ~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np  156 (353)
T PF00930_consen   77 QLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNP  156 (353)
T ss_dssp             ESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---
T ss_pred             EeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCC
Confidence            433222110    0       0 12246788999999888753  2222                               


Q ss_pred             ----EEEEecCCceee--Ee----cCCCceeEEEeecCce-EEEeC-----CCCcEEEEEcCCCceeEEeee-cccce--
Q psy7482         169 ----VVFSVEKAGVLQ--TL----KSESKVHSVCFLNETT-VCTGN-----EESAITAYNLTDGSHLWQIKA-SASRI--  229 (327)
Q Consensus       169 ----~i~d~~~~~~~~--~~----~~~~~i~~~~~~~~~~-l~~~~-----~d~~i~i~d~~~~~~~~~~~~-~~~~v--  229 (327)
                          .++|+.+++...  ..    .....+..+.|.+++. ++..-     ....+.++|..++........ ....+  
T Consensus       157 ~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~  236 (353)
T PF00930_consen  157 RVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDV  236 (353)
T ss_dssp             EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSS
T ss_pred             ceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceee
Confidence                223333332211  00    0233467788888733 44322     222466677776654332221 22222  


Q ss_pred             -EEEEEEecCCCcEEEEecCCCe--EEEEEcCCCceeEEeecccCceEE-EeeeC---cEEEEEecC--CcEEEEEccCc
Q psy7482         230 -KGLVFFSIPQETTVCTGNEESA--ITAYNLTDGSHLWHIKASASRIKG-LASHR---NHLICITSA--GDLVVWELNED  300 (327)
Q Consensus       230 -~~~~~~~s~~~~~l~~~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~---~~l~~~~~d--g~v~iw~~~~~  300 (327)
                       ....+....++.++.....||.  |.+++...+. ...+....-.|.. +.+++   ...+++..+  +.-.+|.++..
T Consensus       237 ~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~  315 (353)
T PF00930_consen  237 YDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLD  315 (353)
T ss_dssp             SSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETT
T ss_pred             ecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeC
Confidence             2344421144555555556765  5555655554 3355544556655 55666   445555553  34455554433


Q ss_pred             cCCCceeeeecCCCCceEEEEeCCC
Q psy7482         301 VTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       301 ~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ....++.+.......  ..+.|+|+
T Consensus       316 ~~~~~~~LT~~~~~~--~~~~~Spd  338 (353)
T PF00930_consen  316 SGGEPKCLTCEDGDH--YSASFSPD  338 (353)
T ss_dssp             ETTEEEESSTTSSTT--EEEEE-TT
T ss_pred             CCCCeEeccCCCCCc--eEEEECCC
Confidence            111333333222211  58888886

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.44  E-value=0.00024  Score=58.29  Aligned_cols=197  Identities=13%  Similarity=0.208  Sum_probs=119.6

Q ss_pred             CEEEEEcCCCceeeeeeccccCccccceEEEEEccC----CcEEEeec----------C-CeEEEEEecCC-----c--e
Q psy7482         121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE----GLLYAIPI----------Q-NKAVVFSVEKA-----G--V  178 (327)
Q Consensus       121 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~----------~-~~i~i~d~~~~-----~--~  178 (327)
                      .|++.|..+.+.+..+.+..... ...+..+.+..+    ..++++|+          . |.+.++++...     +  .
T Consensus         3 ~i~l~d~~~~~~~~~~~l~~~E~-~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    3 SIRLVDPTTFEVLDSFELEPNEH-VTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             EEEEEETTTSSEEEEEEEETTEE-EEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             EEEEEeCCCCeEEEEEECCCCce-EEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            57888888887776666665421 111333444432    46777663          1 88999999884     2  2


Q ss_pred             eeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeec--ccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482         179 LQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKAS--ASRIKGLVFFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       179 ~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                      +.....+++|++++--.+ +++++ ..+.|.+|++...+.+.....+  ...+.++..    .+.+++.|.....+.++.
T Consensus        82 i~~~~~~g~V~ai~~~~~-~lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~----~~~~I~vgD~~~sv~~~~  155 (321)
T PF03178_consen   82 IHSTEVKGPVTAICSFNG-RLVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV----FKNYILVGDAMKSVSLLR  155 (321)
T ss_dssp             EEEEEESS-EEEEEEETT-EEEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE----ETTEEEEEESSSSEEEEE
T ss_pred             EEEEeecCcceEhhhhCC-EEEEe-ecCEEEEEEccCcccchhhheecceEEEEEEec----cccEEEEEEcccCEEEEE
Confidence            233346889999988744 44443 3478999999887722222222  225566654    466899998888888875


Q ss_pred             cCC-CceeEEeec--ccCceEEEeeeC--cEEEEEecCCcEEEEEccCccC-----C-CceeeeecCCCCceEEE---Ee
Q psy7482         257 LTD-GSHLWHIKA--SASRIKGLASHR--NHLICITSAGDLVVWELNEDVT-----R-EPQRVSATNDGCRFTCL---AI  322 (327)
Q Consensus       257 ~~~-~~~~~~~~~--~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~-----~-~~~~~~~~~~~~~i~~l---~~  322 (327)
                      .+. ...+..+..  ....++++.|-+  +.++.+..+|.+.++..+....     . ..........+..|+++   .+
T Consensus       156 ~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l  235 (321)
T PF03178_consen  156 YDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSL  235 (321)
T ss_dssp             EETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--S
T ss_pred             EEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEe
Confidence            543 332333332  344678888873  6999999999999999875321     1 33455666677888888   55


Q ss_pred             CC
Q psy7482         323 RP  324 (327)
Q Consensus       323 ~p  324 (327)
                      .|
T Consensus       236 ~~  237 (321)
T PF03178_consen  236 IP  237 (321)
T ss_dssp             S-
T ss_pred             ee
Confidence            44

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.43  E-value=0.00067  Score=56.71  Aligned_cols=212  Identities=14%  Similarity=0.153  Sum_probs=122.0

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE------------------------------------------eEE
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK------------------------------------------LFK   93 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~------------------------------------------~~~   93 (327)
                      .|+.+.|.++...|++|...|.|.+|.....+...                                          .+.
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            58899999998899999999999998653211110                                          000


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc---CccccceEEEEEcc-----CC---cEEEe
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY---GVGFENLDSVVWSP-----EG---LLYAI  162 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~-----~~---~~l~~  162 (327)
                      ....+. |++++.+.-| +++.|..+|.+.+.|++....+........   ......+.++.|..     |+   -.+.+
T Consensus        83 ~~~~g~-vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v  160 (395)
T PF08596_consen   83 DAKQGP-VTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV  160 (395)
T ss_dssp             ---S-S-EEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred             eccCCc-EeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence            222334 8889887444 899999999999999988877776555551   22234577888863     33   35666


Q ss_pred             ec-CCeEEEEEec--C-Cce----eeEe-cCCCceeEEEee-cC---------------------ceEEEeCCCCcEEEE
Q psy7482         163 PI-QNKAVVFSVE--K-AGV----LQTL-KSESKVHSVCFL-NE---------------------TTVCTGNEESAITAY  211 (327)
Q Consensus       163 ~~-~~~i~i~d~~--~-~~~----~~~~-~~~~~i~~~~~~-~~---------------------~~l~~~~~d~~i~i~  211 (327)
                      |+ .|.+.+|.+.  . +..    .... .+.+++..+..- .+                     .-+++...+..++++
T Consensus       161 GTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~  240 (395)
T PF08596_consen  161 GTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVF  240 (395)
T ss_dssp             EETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE
T ss_pred             EeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEE
Confidence            65 7999999764  1 111    1111 245555555422 11                     124444557789999


Q ss_pred             EcCCCceeEEeeecccceEEEEEEe---cCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482         212 NLTDGSHLWQIKASASRIKGLVFFS---IPQETTVCTGNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       212 d~~~~~~~~~~~~~~~~v~~~~~~~---s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                      ...+.+..++..........+.+.+   ...+..|++-..+|.+++|.+..-+.+..+..+
T Consensus       241 ~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~  301 (395)
T PF08596_consen  241 KPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLP  301 (395)
T ss_dssp             -TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-S
T ss_pred             eCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCC
Confidence            9988777655442222233334421   135778888899999999999998888777654

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.38  E-value=0.00015  Score=61.13  Aligned_cols=200  Identities=14%  Similarity=0.177  Sum_probs=114.7

Q ss_pred             eEEEEEccccccccccccccccEEEEEECCCCCeEEEe---cCC-CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          35 TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC---SDD-GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        35 ~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d-~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      .+.+=|.. +...+.+..-...+..-+|+|++..++-.   ... ..+.++++++++......  ..+. -...+|+|||
T Consensus       174 ~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~--~~g~-~~~P~fspDG  249 (425)
T COG0823         174 ELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN--FNGN-NGAPAFSPDG  249 (425)
T ss_pred             eEEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec--cCCc-cCCccCCCCC
Confidence            34444433 55555555555667788999998876543   222 469999999887766652  1222 3456899999


Q ss_pred             CEEEEEe-CCCC--EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC--C--eEEEEEecCCceeeEec
Q psy7482         111 KLALSVG-KDKT--LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ--N--KAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       111 ~~l~~~~-~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~--~i~i~d~~~~~~~~~~~  183 (327)
                      +.|+.+. .||.  |.++|+..++..........      -..-.|+|+|+.++..+|  |  .|.+++.+.+.......
T Consensus       250 ~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi------~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~  323 (425)
T COG0823         250 SKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGI------NTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTF  323 (425)
T ss_pred             CEEEEEECCCCCccEEEEcCCCCcceecccCCcc------ccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeec
Confidence            8776554 4554  66667776663332222221      235679999998888763  4  57777777666533333


Q ss_pred             CCCceeEEEeecC-ceEEEeC-CCCc--EEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec
Q psy7482         184 SESKVHSVCFLNE-TTVCTGN-EESA--ITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN  247 (327)
Q Consensus       184 ~~~~i~~~~~~~~-~~l~~~~-~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~  247 (327)
                      ....-..-.|+|| .+++..+ .+|.  |.+.|+.++...+.+. +......-.+  .++++.+...+
T Consensus       324 ~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~--~~ng~~i~~~s  388 (425)
T COG0823         324 SGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STYLNESPSW--APNGRMIMFSS  388 (425)
T ss_pred             cCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccccCCCCCc--CCCCceEEEec
Confidence            2222227778998 5555443 3454  6666666555333222 1111222233  26666665443

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.36  E-value=0.00077  Score=54.25  Aligned_cols=210  Identities=14%  Similarity=0.148  Sum_probs=127.1

Q ss_pred             EECCCCC-eEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc
Q psy7482          61 KFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS  139 (327)
Q Consensus        61 ~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  139 (327)
                      .|.++.. ++.+--..+.|.-|+..+++.....   ..+. +.++.....+..|+++..  .+.+++.+++.........
T Consensus        31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~---~p~~-~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~  104 (307)
T COG3386          31 VWDPDRGALLWVDILGGRIHRLDPETGKKRVFP---SPGG-FSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEP  104 (307)
T ss_pred             cCcCCCCEEEEEeCCCCeEEEecCCcCceEEEE---CCCC-cccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccc
Confidence            4666665 4455556778888888766443222   2222 444444444545555433  3677777666553333222


Q ss_pred             ccCccccceEEEEEccCCcEEEeecC------------CeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEE-eCC
Q psy7482         140 SYGVGFENLDSVVWSPEGLLYAIPIQ------------NKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCT-GNE  204 (327)
Q Consensus       140 ~~~~~~~~v~~~~~~~~~~~l~~~~~------------~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~-~~~  204 (327)
                      .........+.+...|+|.+.+....            |.++.+|. .+...+.+. +-...+.++|||| ..+.. =+.
T Consensus       105 ~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~  183 (307)
T COG3386         105 EDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTP  183 (307)
T ss_pred             cCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCC
Confidence            22223345778899999987766433            33444443 455555555 3566789999999 45444 455


Q ss_pred             CCcEEEEEcCC--Cce-----eEEeeecccceEEEEEEecCCCcEEEEecCCC-eEEEEEcCCCceeEEeecccCceEEE
Q psy7482         205 ESAITAYNLTD--GSH-----LWQIKASASRIKGLVFFSIPQETTVCTGNEES-AITAYNLTDGSHLWHIKASASRIKGL  276 (327)
Q Consensus       205 d~~i~i~d~~~--~~~-----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~v~~~  276 (327)
                      .+.|.-|++..  +..     ...+....+..-.++.  +.+|.+.+++-.+| .|.+|+.. ++++..+..+...++++
T Consensus       184 ~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~v--DadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~  260 (307)
T COG3386         184 ANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAV--DADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNP  260 (307)
T ss_pred             CCeEEEEecCcccCccCCcceEEEccCCCCCCCceEE--eCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccc
Confidence            68888887752  111     1112223344455565  36777776555554 89999987 99999998887788889


Q ss_pred             eeeC
Q psy7482         277 ASHR  280 (327)
Q Consensus       277 ~~~~  280 (327)
                      +|-.
T Consensus       261 ~FgG  264 (307)
T COG3386         261 AFGG  264 (307)
T ss_pred             eEeC
Confidence            9876

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.31  E-value=5.5e-05  Score=67.64  Aligned_cols=131  Identities=10%  Similarity=0.122  Sum_probs=93.7

Q ss_pred             CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC--------CcEEEeecCCeEEEEEecCCc--eee----Eec
Q psy7482         118 KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--------GLLYAIPIQNKAVVFSVEKAG--VLQ----TLK  183 (327)
Q Consensus       118 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~~~l~~~~~~~i~i~d~~~~~--~~~----~~~  183 (327)
                      ....|+-.|++.|+.+........      +.-..+.|+        .+.++.-+++.+..||.+-..  .+.    .+.
T Consensus       502 ~~~~ly~mDLe~GKVV~eW~~~~~------~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~  575 (794)
T PF08553_consen  502 NPNKLYKMDLERGKVVEEWKVHDD------IPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYS  575 (794)
T ss_pred             CCCceEEEecCCCcEEEEeecCCC------cceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccc
Confidence            457899999999999888877664      223334442        234555568999999998643  222    223


Q ss_pred             CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         184 SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       184 ~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      ......|++-+.+|++++|+.+|.||+||--..+....+++-..+|..|..  +.||+++++.+. ..|.+++.
T Consensus       576 ~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDv--t~DGkwilaTc~-tyLlLi~t  646 (794)
T PF08553_consen  576 SKNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDV--TADGKWILATCK-TYLLLIDT  646 (794)
T ss_pred             cCCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEe--cCCCcEEEEeec-ceEEEEEE
Confidence            556788888888899999999999999994333333345666789999999  489999887664 56666664

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.31  E-value=0.0015  Score=54.94  Aligned_cols=213  Identities=9%  Similarity=0.147  Sum_probs=146.5

Q ss_pred             EEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC---CCCEEEEEcCCCce
Q psy7482          57 ITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK---DKTLRTWNLVKGRS  132 (327)
Q Consensus        57 v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~  132 (327)
                      -..++.++.+..+ +....+..|.+.|..+.+.......+.  . ...++++++++.+..+..   ++.+.+.|..+.+.
T Consensus        76 p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~--~-P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~  152 (381)
T COG3391          76 PAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL--G-PVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV  152 (381)
T ss_pred             ccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc--C-CceEEECCCCCEEEEEecccCCceEEEEeCCCCeE
Confidence            4567788877744 445556899999988888777774444  3 788999999988777765   68899999888877


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCceee-----EecCCCceeEEEeecC-ceEEE-eC
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQ-----TLKSESKVHSVCFLNE-TTVCT-GN  203 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~-----~~~~~~~i~~~~~~~~-~~l~~-~~  203 (327)
                      .........      ...++++|+++.+.+..  ++.+.++|........     ..........+.++|+ .++.+ ..
T Consensus       153 ~~~~~vG~~------P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~  226 (381)
T COG3391         153 TATIPVGNT------PTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVAND  226 (381)
T ss_pred             EEEEecCCC------cceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEec
Confidence            666433322      37899999999776665  8999999977666553     1333445667888888 43333 33


Q ss_pred             CC--CcEEEEEcCCCceeEE-eeecccceEEEEEEecCCCcEEEEecC-CCeEEEEEcCCCceeEEeecccC---ceEEE
Q psy7482         204 EE--SAITAYNLTDGSHLWQ-IKASASRIKGLVFFSIPQETTVCTGNE-ESAITAYNLTDGSHLWHIKASAS---RIKGL  276 (327)
Q Consensus       204 ~d--~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~---~v~~~  276 (327)
                      .+  +.+...|..++..... ..........+..  .|+|..+.+... .+.+.+-|..+............   .+..+
T Consensus       227 ~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~--~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~  304 (381)
T COG3391         227 GSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAV--DPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSI  304 (381)
T ss_pred             cCCCceEEEEeCCCceEEEeccccccCCCCceeE--CCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceec
Confidence            33  6899999888776654 2222213445566  489998888744 48899999888877766554432   35555


Q ss_pred             eeeC
Q psy7482         277 ASHR  280 (327)
Q Consensus       277 ~~~~  280 (327)
                      ++.+
T Consensus       305 ~~~~  308 (381)
T COG3391         305 AISP  308 (381)
T ss_pred             ccee
Confidence            5555

>KOG1897|consensus

Probab=98.29  E-value=0.0026  Score=57.32  Aligned_cols=295  Identities=12%  Similarity=0.100  Sum_probs=173.4

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEcc--cccccccc--ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMV--KRKQSGAL--MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~--~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      .+|.-..+  |..+|.++..||.+.-+.+.  ++.....-  .-...++.--.|+..++.-+.+..|+-..+|..+..-.
T Consensus       584 RSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv  663 (1096)
T KOG1897|consen  584 RSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLV  663 (1096)
T ss_pred             hheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEE
Confidence            34555555  68899999999998877554  33322111  12345666666766555444455566666665443222


Q ss_pred             EEeEEecccCCceeeE-EEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482          89 EKLFKKAHKGTAVNHI-SIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ  165 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~-~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  165 (327)
                      ...+   .-.. +..+ .|+.+  ...++++. .+.+++.-++.-+.+.....+-.    .....+++.+....+++.++
T Consensus       664 ~spl---s~ke-v~~~c~f~s~a~~d~l~~~~-~~~l~i~tid~iqkl~irtvpl~----~~prrI~~q~~sl~~~v~s~  734 (1096)
T KOG1897|consen  664 YSPL---SLKE-VNHMCPFNSDAYPDSLASAN-GGALTIGTIDEIQKLHIRTVPLG----ESPRRICYQESSLTFGVLSN  734 (1096)
T ss_pred             Eecc---chHH-hhhhcccccccCCceEEEec-CCceEEEEecchhhcceeeecCC----CChhheEecccceEEEEEec
Confidence            2222   1111 2222 23322  23456554 46688877765443333222221    12677788775555544321


Q ss_pred             ---------------CeEEEEEecCCceeeEec--CC---CceeEEEeecC--ceEEEeC----------CCCcEEEEEc
Q psy7482         166 ---------------NKAVVFSVEKAGVLQTLK--SE---SKVHSVCFLNE--TTVCTGN----------EESAITAYNL  213 (327)
Q Consensus       166 ---------------~~i~i~d~~~~~~~~~~~--~~---~~i~~~~~~~~--~~l~~~~----------~d~~i~i~d~  213 (327)
                                     ..++++|-++.+.+...+  ..   ..+.++.|..|  .++++|.          ..|.|.+|..
T Consensus       735 r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~  814 (1096)
T KOG1897|consen  735 RIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEF  814 (1096)
T ss_pred             ccccchhhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEE
Confidence                           246777777777666554  22   23555557766  5677664          3578888888


Q ss_pred             CCCceeEEeee--cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecC
Q psy7482         214 TDGSHLWQIKA--SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSA  289 (327)
Q Consensus       214 ~~~~~~~~~~~--~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d  289 (327)
                      ...+.+.....  -++.+.++..   -+|+++|.-+  ..|++|+..+.+.++.-..+..++..+...-  +.++.|..-
T Consensus       815 ~e~~~L~~v~e~~v~Gav~aL~~---fngkllA~In--~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm  889 (1096)
T KOG1897|consen  815 EELNSLELVAETVVKGAVYALVE---FNGKLLAGIN--QSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLM  889 (1096)
T ss_pred             ecCCceeeeeeeeeccceeehhh---hCCeEEEecC--cEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeecc
Confidence            77444444322  2355666665   5788887654  5899999999887777777777888877766  899999988


Q ss_pred             CcEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482         290 GDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       290 g~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                      +.+.+-.+.... .....+.+..++..++++++-.
T Consensus       890 ~Sitll~y~~~e-g~f~evArD~~p~Wmtaveil~  923 (1096)
T KOG1897|consen  890 RSITLLQYKGDE-GNFEEVARDYNPNWMTAVEILD  923 (1096)
T ss_pred             ceEEEEEEeccC-CceEEeehhhCccceeeEEEec
Confidence            887776655541 0345555555666677666544

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=98.28  E-value=0.00093  Score=51.67  Aligned_cols=194  Identities=14%  Similarity=0.143  Sum_probs=119.7

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecCCC--eEEEEEcccccccccccccc-ccEEEEEECCCCCeEEEecCCC
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADE--TVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLISCSDDG   76 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg--~v~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~   76 (327)
                      |++.+.+. +....-...+.|  ++.++-+.+.-|  .|+.+|+.+++......-.. ---..++.. +++...-.-.++
T Consensus        33 ~~vv~~yp-Hd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~  110 (264)
T PF05096_consen   33 YEVVETYP-HDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEG  110 (264)
T ss_dssp             EEEEEEEE---TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSS
T ss_pred             eEEEEECC-CCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCC
Confidence            45555555 223455667777  566666777665  69999999988665433211 111223333 334445566788


Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  156 (327)
                      ...+||..+.+.+..+.....   =+.++  .+++.|+.......|.++|..+.+....+...........++.+.|- +
T Consensus       111 ~~f~yd~~tl~~~~~~~y~~E---GWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~  184 (264)
T PF05096_consen  111 TGFVYDPNTLKKIGTFPYPGE---GWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-N  184 (264)
T ss_dssp             EEEEEETTTTEEEEEEE-SSS-----EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-T
T ss_pred             eEEEEccccceEEEEEecCCc---ceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-c
Confidence            999999999999988844333   45565  45667777666778999999887777666665443334457778876 6


Q ss_pred             CcEEEeec-CCeEEEEEecCCceeeEec----------------CCCceeEEEeecC--ceEEEeC
Q psy7482         157 GLLYAIPI-QNKAVVFSVEKAGVLQTLK----------------SESKVHSVCFLNE--TTVCTGN  203 (327)
Q Consensus       157 ~~~l~~~~-~~~i~i~d~~~~~~~~~~~----------------~~~~i~~~~~~~~--~~l~~~~  203 (327)
                      |.+.|-.- ...|...|..+|+....+.                ...-.+.|++.|+  .++++|-
T Consensus       185 G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK  250 (264)
T PF05096_consen  185 GKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK  250 (264)
T ss_dssp             TEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred             CEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence            76666664 7889999999999887663                0235789999987  4556653

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=98.27  E-value=0.00099  Score=51.52  Aligned_cols=191  Identities=12%  Similarity=0.113  Sum_probs=124.6

Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-  163 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-  163 (327)
                      +.+..++...... ...+.|..++.++-+.+.-|  .|+.+|+.+++......++..--    -..++... ++++... 
T Consensus        34 ~vv~~ypHd~~aF-TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~F----gEGit~~~-d~l~qLTW  107 (264)
T PF05096_consen   34 EVVETYPHDPTAF-TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYF----GEGITILG-DKLYQLTW  107 (264)
T ss_dssp             EEEEEEE--TT-E-EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT------EEEEEEET-TEEEEEES
T ss_pred             EEEEECCCCCccc-CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCcccc----ceeEEEEC-CEEEEEEe
Confidence            4455552222222 66788877888888887766  79999999999887777665421    22344443 3444444 


Q ss_pred             cCCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecc-----cceEEEEEEecC
Q psy7482         164 IQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASA-----SRIKGLVFFSIP  238 (327)
Q Consensus       164 ~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~s~  238 (327)
                      -++...+||..+.+.+.++...+.-..++.. +..|+.......++.+|..+.+...++....     ..++.+.+   -
T Consensus       108 k~~~~f~yd~~tl~~~~~~~y~~EGWGLt~d-g~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~---i  183 (264)
T PF05096_consen  108 KEGTGFVYDPNTLKKIGTFPYPGEGWGLTSD-GKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEY---I  183 (264)
T ss_dssp             SSSEEEEEETTTTEEEEEEE-SSS--EEEEC-SSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEE---E
T ss_pred             cCCeEEEEccccceEEEEEecCCcceEEEcC-CCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEE---E
Confidence            3899999999999999999866666677733 3566666667889999998888777665332     24566777   4


Q ss_pred             CCcEEEEecCCCeEEEEEcCCCceeEEeecc---------------cCceEEEeeeC---cEEEEEe
Q psy7482         239 QETTVCTGNEESAITAYNLTDGSHLWHIKAS---------------ASRIKGLASHR---NHLICIT  287 (327)
Q Consensus       239 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---------------~~~v~~~~~~~---~~l~~~~  287 (327)
                      +|...|=.=....|...|..+|+.+..+...               ....+.||+.|   .+++||-
T Consensus       184 ~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK  250 (264)
T PF05096_consen  184 NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK  250 (264)
T ss_dssp             TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred             cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence            7888887777788999999999977765411               24688999988   6666664

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PRK13616 lipoprotein LpqB; Provisional

Probab=98.25  E-value=0.00068  Score=59.79  Aligned_cols=191  Identities=14%  Similarity=0.130  Sum_probs=102.8

Q ss_pred             ccEEEEEECCCCCeEEEec------CCC--cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC-EEEE
Q psy7482          55 GTITCLKFTPEGSHLISCS------DDG--SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT-LRTW  125 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~------~d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iw  125 (327)
                      ..+...+++|+|+.++...      .|+  .|.+++.. +.. ..+..+.  . ...-.|+|+|+.+++...... +++.
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~g~--~-~t~PsWspDG~~lw~v~dg~~~~~v~  424 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLEGH--S-LTRPSWSLDADAVWVVVDGNTVVRVI  424 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeecCC--C-CCCceECCCCCceEEEecCcceEEEe
Confidence            4678899999999887654      243  45555542 222 3331222  3 677899999887777653312 2222


Q ss_pred             EcCCCceeeeeeccccC---ccccceEEEEEccCCcEEEeecCCeEEE---EEecCCce-e---eEec--CCCceeEEEe
Q psy7482         126 NLVKGRSAYITNLSSYG---VGFENLDSVVWSPEGLLYAIPIQNKAVV---FSVEKAGV-L---QTLK--SESKVHSVCF  193 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~i~i---~d~~~~~~-~---~~~~--~~~~i~~~~~  193 (327)
                      +-.....+.........   .....|..+.|+|||..++.-.++.|++   -....++. +   ..+.  ....+.++.|
T Consensus       425 ~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W  504 (591)
T PRK13616        425 RDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMIIGGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDW  504 (591)
T ss_pred             ccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEECCEEEEEEEEeCCCCceeecccEEeecccCCccccceE
Confidence            21111112211111110   0123499999999999988877888877   44444541 1   1122  2234688999


Q ss_pred             ecCceEEEeCCCCcEEEEEcCC-CceeEEeee--cccceEEEEEEecCCCcEEEEecCCCeEEE
Q psy7482         194 LNETTVCTGNEESAITAYNLTD-GSHLWQIKA--SASRIKGLVFFSIPQETTVCTGNEESAITA  254 (327)
Q Consensus       194 ~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~--~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i  254 (327)
                      .+++.|+++..++.-.+|.+.- +.....+..  ...++..++-.  +  ..++....++.+.+
T Consensus       505 ~~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~--~--~~iyv~~~~g~~~l  564 (591)
T PRK13616        505 RTGDSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAAS--P--STVYVTDARAVLQL  564 (591)
T ss_pred             ecCCEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecC--C--ceEEEEcCCceEEe
Confidence            9996666766655555555432 222112122  24456666642  2  23445555554443

>KOG4640|consensus

Probab=98.21  E-value=1.1e-05  Score=68.21  Aligned_cols=95  Identities=21%  Similarity=0.313  Sum_probs=77.2

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCcee-eEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN-HISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      ...+.-+.|+|.-.++|.+..+|.|.+..++ .+.+.++ ..+... ++ +++|.|||+.|+.|-.||+|++.|.+++..
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwti-p~p~~~-v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~   96 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTI-PIPGEN-VTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR   96 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEec-cCCCCc-cceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence            3457889999999999999999999999998 7888887 444444 55 999999999999999999999999999887


Q ss_pred             eeeeeccccCccccceEEEEEcc
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      +.......    ..+|.++.|++
T Consensus        97 l~~~~~s~----e~~is~~~w~~  115 (665)
T KOG4640|consen   97 LVSFLFSV----ETDISKGIWDR  115 (665)
T ss_pred             eecccccc----ccchheeeccc
Confidence            76642222    23378888874

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.18  E-value=0.00053  Score=57.92  Aligned_cols=152  Identities=16%  Similarity=0.229  Sum_probs=97.2

Q ss_pred             eeeEEEecCCCEEEEEe---CC-CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC--eEEEEE
Q psy7482         101 VNHISIHPSGKLALSVG---KD-KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN--KAVVFS  172 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~---~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d  172 (327)
                      +..-.|+|++..++...   .. ..+.++|+++++..........      -..-+|+|||+.++.+.  +|  .|+++|
T Consensus       195 ~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~------~~~P~fspDG~~l~f~~~rdg~~~iy~~d  268 (425)
T COG0823         195 ILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGN------NGAPAFSPDGSKLAFSSSRDGSPDIYLMD  268 (425)
T ss_pred             eeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCc------cCCccCCCCCCEEEEEECCCCCccEEEEc
Confidence            77778999888765543   22 3599999999888777665554      45678999999888875  44  577788


Q ss_pred             ecCCceeeEec-CCCceeEEEeecC-ce-EEEeCCCCc--EEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec
Q psy7482         173 VEKAGVLQTLK-SESKVHSVCFLNE-TT-VCTGNEESA--ITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN  247 (327)
Q Consensus       173 ~~~~~~~~~~~-~~~~i~~~~~~~~-~~-l~~~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~  247 (327)
                      +..+...+ +. ..+.-..-.|+|| .. +++.+..|.  |.+++...+.. ..+......-..-.+  +|+|++++..+
T Consensus       269 l~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~--SpdG~~i~~~~  344 (425)
T COG0823         269 LDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVW--SPDGDKIVFES  344 (425)
T ss_pred             CCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccC--CCCCCEEEEEe
Confidence            88777444 44 3333346778898 44 445555555  55556655443 333322222223445  59999988766


Q ss_pred             C-CCe--EEEEEcCCCce
Q psy7482         248 E-ESA--ITAYNLTDGSH  262 (327)
Q Consensus       248 ~-d~~--i~i~d~~~~~~  262 (327)
                      . +|.  |.+.|+.++..
T Consensus       345 ~~~g~~~i~~~~~~~~~~  362 (425)
T COG0823         345 SSGGQWDIDKNDLASGGK  362 (425)
T ss_pred             ccCCceeeEEeccCCCCc
Confidence            4 344  67777766654

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=98.18  E-value=0.0021  Score=51.78  Aligned_cols=210  Identities=13%  Similarity=0.145  Sum_probs=121.5

Q ss_pred             EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE---ecccCCcee
Q psy7482          26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK---KAHKGTAVN  102 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~---~~~~~~~v~  102 (327)
                      ++.+--..+.|.-|+..+++.. .+. +.+.+.++.....+..|+++..  .+.+++.+++.....+.   ........+
T Consensus        39 L~w~DI~~~~i~r~~~~~g~~~-~~~-~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~~~~~r~N  114 (307)
T COG3386          39 LLWVDILGGRIHRLDPETGKKR-VFP-SPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPEDGLPLNRPN  114 (307)
T ss_pred             EEEEeCCCCeEEEecCCcCceE-EEE-CCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccCCCCcCCCC
Confidence            4555556677888887655322 222 2233344444444445554443  36677776555533321   122222367


Q ss_pred             eEEEecCCCEEEEEeC-----------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEE
Q psy7482         103 HISIHPSGKLALSVGK-----------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAV  169 (327)
Q Consensus       103 ~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~  169 (327)
                      .+...|+|.+.+....           -|.|+.+|. .+.......-.     ....+.++||||++.+..+.  .+.|.
T Consensus       115 D~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~-----~~~~NGla~SpDg~tly~aDT~~~~i~  188 (307)
T COG3386         115 DGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDD-----LTIPNGLAFSPDGKTLYVADTPANRIH  188 (307)
T ss_pred             ceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCc-----EEecCceEECCCCCEEEEEeCCCCeEE
Confidence            7888899876654333           133444443 23332222110     11267899999998877775  58888


Q ss_pred             EEEecC--Cc---e--eeEec-CCCceeEEEeecCceEEEeC-CCC-cEEEEEcCCCceeEEeeecccceEEEEEEecCC
Q psy7482         170 VFSVEK--AG---V--LQTLK-SESKVHSVCFLNETTVCTGN-EES-AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQ  239 (327)
Q Consensus       170 i~d~~~--~~---~--~~~~~-~~~~i~~~~~~~~~~l~~~~-~d~-~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~  239 (327)
                      -|++..  +.   .  ...+. ..+..-.++...++.+.++. .+| .|..|+.. ++.+..+..+...+++++|- .++
T Consensus       189 r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~Fg-G~~  266 (307)
T COG3386         189 RYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPAFG-GPD  266 (307)
T ss_pred             EEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccceEe-CCC
Confidence            887752  11   1  11111 35667778888786666443 443 89999987 88998888777778899986 365


Q ss_pred             CcEEEEec
Q psy7482         240 ETTVCTGN  247 (327)
Q Consensus       240 ~~~l~~~~  247 (327)
                      .+.|.+.+
T Consensus       267 ~~~L~iTs  274 (307)
T COG3386         267 LNTLYITS  274 (307)
T ss_pred             cCEEEEEe
Confidence            55555443

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.18  E-value=0.0004  Score=45.74  Aligned_cols=97  Identities=16%  Similarity=0.354  Sum_probs=71.0

Q ss_pred             eeEEEeec---C--ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         188 VHSVCFLN---E--TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       188 i~~~~~~~---~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      |+++++.+   +  +.|++|+.|..|++|+-  .+.+.++... ..++.++-.   .+..++.+-.+|+|-+|+-  .+.
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~--~e~~~Ei~e~-~~v~~L~~~---~~~~F~Y~l~NGTVGvY~~--~~R   73 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG--DEIVAEITET-DKVTSLCSL---GGGRFAYALANGTVGVYDR--SQR   73 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeC--CcEEEEEecc-cceEEEEEc---CCCEEEEEecCCEEEEEeC--cce
Confidence            56666654   3  68999999999999984  4567777644 457777763   4577899999999999974  456


Q ss_pred             eEEeecccCceEEEeeeC------cEEEEEecCCcEE
Q psy7482         263 LWHIKASASRIKGLASHR------NHLICITSAGDLV  293 (327)
Q Consensus       263 ~~~~~~~~~~v~~~~~~~------~~l~~~~~dg~v~  293 (327)
                      ++..+... .+.++++..      .-|++|-.+|.|-
T Consensus        74 lWRiKSK~-~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   74 LWRIKSKN-QVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             eeeeccCC-CeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            66666444 466776655      4799999999874

>KOG3617|consensus

Probab=98.18  E-value=3.3e-05  Score=67.76  Aligned_cols=106  Identities=13%  Similarity=0.197  Sum_probs=84.7

Q ss_pred             eeEEEecCCCEEEEEe----CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC
Q psy7482         102 NHISIHPSGKLALSVG----KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA  176 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~  176 (327)
                      +-..|+|...++++++    ..|.|.||- ++|++......+-+      +.+++|+|..-+|+.|- -|.+.+|...+.
T Consensus        19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~h------atSLCWHpe~~vLa~gwe~g~~~v~~~~~~   91 (1416)
T KOG3617|consen   19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVH------ATSLCWHPEEFVLAQGWEMGVSDVQKTNTT   91 (1416)
T ss_pred             cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccccee------hhhhccChHHHHHhhccccceeEEEecCCc
Confidence            3457999888888876    368899985 67776555545544      78899999988888886 789999987766


Q ss_pred             ceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcC
Q psy7482         177 GVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLT  214 (327)
Q Consensus       177 ~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~  214 (327)
                      +.-.... |..+|..+.|+++ +.++++..-|.+.+|...
T Consensus        92 e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   92 ETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             eeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            5544443 8999999999999 889999999999999875

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.15  E-value=0.0037  Score=53.45  Aligned_cols=238  Identities=15%  Similarity=0.136  Sum_probs=131.7

Q ss_pred             cEEEEEECCCCCeEEEe-cCC----CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC----------
Q psy7482          56 TITCLKFTPEGSHLISC-SDD----GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK----------  120 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~-~~d----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----------  120 (327)
                      .+....++|+++++|.+ +..    ..+++.|+++++.+........   ...+.|.++++.|+....+.          
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~---~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~  201 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPK---FSSVSWSDDGKGFFYTRFDEDQRTSDSGYP  201 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEE---SEEEEECTTSSEEEEEECSTTTSS-CCGCC
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccc---cceEEEeCCCCEEEEEEeCcccccccCCCC
Confidence            34567899999988854 233    4599999999977654312211   23389999988777665433          


Q ss_pred             -CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec----C-CeEEEEEecCC-----ceeeEecCCCce-
Q psy7482         121 -TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----Q-NKAVVFSVEKA-----GVLQTLKSESKV-  188 (327)
Q Consensus       121 -~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~-~~i~i~d~~~~-----~~~~~~~~~~~i-  188 (327)
                       .|+.|.+.+.......-+...... .....+..++++++++...    + ..+.+.|+..+     +..........+ 
T Consensus       202 ~~v~~~~~gt~~~~d~lvfe~~~~~-~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~  280 (414)
T PF02897_consen  202 RQVYRHKLGTPQSEDELVFEEPDEP-FWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVE  280 (414)
T ss_dssp             EEEEEEETTS-GGG-EEEEC-TTCT-TSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-E
T ss_pred             cEEEEEECCCChHhCeeEEeecCCC-cEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceE
Confidence             377888776654322222222111 1256788999999877642    4 56888888875     233333333333 


Q ss_pred             eEEEeecCceEEEe---CCCCcEEEEEcCCCce---eEEeeeccc--ceEEEEEEecCCCcEEEEecCCC--eEEEEEcC
Q psy7482         189 HSVCFLNETTVCTG---NEESAITAYNLTDGSH---LWQIKASAS--RIKGLVFFSIPQETTVCTGNEES--AITAYNLT  258 (327)
Q Consensus       189 ~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~---~~~~~~~~~--~v~~~~~~~s~~~~~l~~~~~d~--~i~i~d~~  258 (327)
                      ..+....+.+++..   ...+.|...++.+...   ...+..+..  .+..+..   -.+.+++....++  .|+++++.
T Consensus       281 ~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~---~~~~Lvl~~~~~~~~~l~v~~~~  357 (414)
T PF02897_consen  281 YYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL---FKDYLVLSYRENGSSRLRVYDLD  357 (414)
T ss_dssp             EEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE---ETTEEEEEEEETTEEEEEEEETT
T ss_pred             EEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE---ECCEEEEEEEECCccEEEEEECC
Confidence            34444433444433   2446677777776653   224444444  4555554   2445555555554  58899988


Q ss_pred             CCceeEEeecc-cCceEEEeeeC---cEEEEEecC---CcEEEEEccCc
Q psy7482         259 DGSHLWHIKAS-ASRIKGLASHR---NHLICITSA---GDLVVWELNED  300 (327)
Q Consensus       259 ~~~~~~~~~~~-~~~v~~~~~~~---~~l~~~~~d---g~v~iw~~~~~  300 (327)
                      .+.....+... .+.|..+...+   .+.++.+.-   +++..||+.++
T Consensus       358 ~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~  406 (414)
T PF02897_consen  358 DGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATG  406 (414)
T ss_dssp             -TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTT
T ss_pred             CCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence            44444444433 34455555444   444444432   45777788777

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.13  E-value=0.00054  Score=45.15  Aligned_cols=98  Identities=16%  Similarity=0.191  Sum_probs=70.1

Q ss_pred             eeeEEEec---CC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-cCCeEEEEEecC
Q psy7482         101 VNHISIHP---SG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-IQNKAVVFSVEK  175 (327)
Q Consensus       101 v~~~~~~~---~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~~  175 (327)
                      |+++++..   +| +.|++|+.|..|++|+-+  +.+..+.....      +.+++-...++ ++.+ .+|+|-+|+-  
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~------v~~L~~~~~~~-F~Y~l~NGTVGvY~~--   70 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITETDK------VTSLCSLGGGR-FAYALANGTVGVYDR--   70 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecccc------eEEEEEcCCCE-EEEEecCCEEEEEeC--
Confidence            56666655   22 579999999999999843  45555544444      88888777755 5555 4999999975  


Q ss_pred             CceeeEecCCCceeEEEeecC-----ceEEEeCCCCcEE
Q psy7482         176 AGVLQTLKSESKVHSVCFLNE-----TTVCTGNEESAIT  209 (327)
Q Consensus       176 ~~~~~~~~~~~~i~~~~~~~~-----~~l~~~~~d~~i~  209 (327)
                      .+.+...+....+.++++..-     ..|++|-.+|.|-
T Consensus        71 ~~RlWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   71 SQRLWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             cceeeeeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            556677776777888877642     2699998888874

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.12  E-value=0.0041  Score=52.72  Aligned_cols=190  Identities=14%  Similarity=0.079  Sum_probs=100.0

Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc----CccccceEEEE
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY----GVGFENLDSVV  152 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~v~~~~  152 (327)
                      .|.+|+.. |+.+..+.-.. +. +.++.|..+. .|+....||.++++|+. |+.  .+.+...    ......+....
T Consensus        62 ~I~iys~s-G~ll~~i~w~~-~~-iv~~~wt~~e-~LvvV~~dG~v~vy~~~-G~~--~fsl~~~i~~~~v~e~~i~~~~  134 (410)
T PF04841_consen   62 SIQIYSSS-GKLLSSIPWDS-GR-IVGMGWTDDE-ELVVVQSDGTVRVYDLF-GEF--QFSLGEEIEEEKVLECRIFAIW  134 (410)
T ss_pred             EEEEECCC-CCEeEEEEECC-CC-EEEEEECCCC-eEEEEEcCCEEEEEeCC-Cce--eechhhhccccCcccccccccc
Confidence            48888865 55666653333 45 9999998755 56667789999999986 443  2222211    10011122223


Q ss_pred             EccCCcEEEeecCCeEEEEEecCCc-eeeEec-CCCceeE----------EEeecC-ceEEEeCCCCcEEEEEcCCCcee
Q psy7482         153 WSPEGLLYAIPIQNKAVVFSVEKAG-VLQTLK-SESKVHS----------VCFLNE-TTVCTGNEESAITAYNLTDGSHL  219 (327)
Q Consensus       153 ~~~~~~~l~~~~~~~i~i~d~~~~~-~~~~~~-~~~~i~~----------~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~  219 (327)
                      +..+| .++...++.+.+.+-.... ....+. .......          ..++.+ ...+....++.+.+.+-...+. 
T Consensus       135 ~~~~G-ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~-  212 (410)
T PF04841_consen  135 FYKNG-IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ-  212 (410)
T ss_pred             cCCCC-EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc-
Confidence            33345 3333345555444322211 111111 0010000          112222 2233333344444333222111 


Q ss_pred             EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc-cCceEEEeeeC
Q psy7482         220 WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS-ASRIKGLASHR  280 (327)
Q Consensus       220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~  280 (327)
                        +. ..+++..++.  ||+++++|.-..+|.+.+....-.+.+.++... ......+.|..
T Consensus       213 --i~-~~~~i~~iav--Spng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG  269 (410)
T PF04841_consen  213 --ID-SDGPIIKIAV--SPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCG  269 (410)
T ss_pred             --cc-CCCCeEEEEE--CCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEEC
Confidence              11 2357899999  599999999999999999886656666665544 34566777776

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=98.10  E-value=0.003  Score=50.59  Aligned_cols=155  Identities=11%  Similarity=0.170  Sum_probs=82.7

Q ss_pred             cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEc-CCC
Q psy7482          52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL-VKG  130 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~  130 (327)
                      .-.+.+..+.-+++|++++++.......-||.....- .......... |..+.|.|++.+.+.+ ..|.|+.=+. ...
T Consensus       142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w-~~~~r~~~~r-iq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~  218 (302)
T PF14870_consen  142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTW-QPHNRNSSRR-IQSMGFSPDGNLWMLA-RGGQIQFSDDPDDG  218 (302)
T ss_dssp             S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS--EEEE--SSS--EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEE
T ss_pred             CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccc-eEEccCccce-ehhceecCCCCEEEEe-CCcEEEEccCCCCc
Confidence            3456788888999999998887666666787543212 2221233444 9999999998766644 8888888772 222


Q ss_pred             ceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec----CCCceeEEEeecCceEEEeCCCC
Q psy7482         131 RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK----SESKVHSVCFLNETTVCTGNEES  206 (327)
Q Consensus       131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~----~~~~i~~~~~~~~~~l~~~~~d~  206 (327)
                      +.-.. ...........+..++|.+++...++|..|.+. .....|+.-+..+    ....++.+.|.+++.-++-+.+|
T Consensus       219 ~~w~~-~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~-~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG~~G  296 (302)
T PF14870_consen  219 ETWSE-PIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLL-VSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLGQDG  296 (302)
T ss_dssp             EEE----B-TTSS--S-EEEEEESSSS-EEEEESTT-EE-EESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE-STT
T ss_pred             ccccc-ccCCcccCceeeEEEEecCCCCEEEEeCCccEE-EeCCCCccceECccccCCCCceEEEEEcCCCceEEECCCc
Confidence            21111 111111112238899999999999998888653 4455566555543    35568888887765555556677


Q ss_pred             cEEEE
Q psy7482         207 AITAY  211 (327)
Q Consensus       207 ~i~i~  211 (327)
                      .+.-|
T Consensus       297 ~ll~~  301 (302)
T PF14870_consen  297 VLLRY  301 (302)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            76554

>KOG4640|consensus

Probab=98.10  E-value=2.1e-05  Score=66.47  Aligned_cols=89  Identities=19%  Similarity=0.316  Sum_probs=75.6

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccce-EEEEEccCCcEEEeec-CCeEEEEEecCCce
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENL-DSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV  178 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~  178 (327)
                      +.-+.|+|.-.++|.+..+|.|.+..+. .+.+..++.+...     + .+++|.|||+++|+|. ||+|++.|++++..
T Consensus        23 i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~-----v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~   96 (665)
T KOG4640|consen   23 IKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGEN-----VTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGR   96 (665)
T ss_pred             eEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCc-----cceeeeecCCCCEEEEEecCCeEEEEEccCCCc
Confidence            7889999999999999999999999987 6666777655543     4 4999999999999997 99999999999998


Q ss_pred             eeE--ecCCCceeEEEeec
Q psy7482         179 LQT--LKSESKVHSVCFLN  195 (327)
Q Consensus       179 ~~~--~~~~~~i~~~~~~~  195 (327)
                      +..  +.....|.++-|++
T Consensus        97 l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   97 LVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             eeccccccccchheeeccc
Confidence            888  44667788888864

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=98.09  E-value=0.0026  Score=49.21  Aligned_cols=237  Identities=12%  Similarity=0.164  Sum_probs=132.1

Q ss_pred             EEEEEECCCC-CeEEEecCCCc-EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCC
Q psy7482          57 ITCLKFTPEG-SHLISCSDDGS-IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVK  129 (327)
Q Consensus        57 v~~~~~~~~~-~~l~~~~~d~~-i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~  129 (327)
                      ...++|+|.. .-++.+-.-|+ ..++|....+...++.......---.-.|+|||.+|+..-.|     |.|-+||.+.
T Consensus        70 ~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~  149 (366)
T COG3490          70 GHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE  149 (366)
T ss_pred             cCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccc
Confidence            3456777743 34555555554 467888877766655221111102234699999998876443     6799999874


Q ss_pred             CceeeeeeccccCccccceEEEEEccCCcEEEeecCC-------------------eEEEEEecCCceeeEec-----CC
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN-------------------KAVVFSVEKAGVLQTLK-----SE  185 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-------------------~i~i~d~~~~~~~~~~~-----~~  185 (327)
                      + ....-.++.+..   ....+.|.+||+.++++..|                   ++.+.|..+++.+.+..     +.
T Consensus       150 ~-fqrvgE~~t~Gi---GpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~  225 (366)
T COG3490         150 G-FQRVGEFSTHGI---GPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQ  225 (366)
T ss_pred             c-cceecccccCCc---CcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhh
Confidence            3 222222232222   26688999999998886432                   24445555555554433     23


Q ss_pred             CceeEEEeecCceEEEeCC------CCcEEEEEcCCCceeEEeee-------cccceEEEEEEecCCCcEEEEecCCCeE
Q psy7482         186 SKVHSVCFLNETTVCTGNE------ESAITAYNLTDGSHLWQIKA-------SASRIKGLVFFSIPQETTVCTGNEESAI  252 (327)
Q Consensus       186 ~~i~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~~~s~~~~~l~~~~~d~~i  252 (327)
                      -.+..++..+|+.++.|+.      |---.+=-...++++.-+..       ....|-+++.+. .++-..+++-..+..
T Consensus       226 lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~-~~glV~lTSP~GN~~  304 (366)
T COG3490         226 LSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANR-RDGLVALTSPRGNRA  304 (366)
T ss_pred             cceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecc-cCCeEEEecCCCCeE
Confidence            4566777777766666542      11111111122333333221       123466777742 355555666667789


Q ss_pred             EEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         253 TAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       253 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+||..+|..+..-.-.  ....++-...-++..+.+|.+.++.-...
T Consensus       305 vi~da~tG~vv~~a~l~--daaGva~~~~gf~vssg~G~~~~~s~~~~  350 (366)
T COG3490         305 VIWDAATGAVVSEAALP--DAAGVAAAKGGFAVSSGQGRIIFYSRAAR  350 (366)
T ss_pred             EEEEcCCCcEEeccccc--ccccceeccCceEEecCCceEEecccccc
Confidence            99999999876543322  22233333455666677888888754433

>PHA02713 hypothetical protein; Provisional

Probab=98.06  E-value=0.0011  Score=58.54  Aligned_cols=214  Identities=10%  Similarity=0.072  Sum_probs=110.9

Q ss_pred             eEEEEEccccccc--cccccccccEEEEEECCCCCeEEEecCC------CcEEEEEcCCCeEEEeEEecccCCceeeEEE
Q psy7482          35 TVVLYDMVKRKQS--GALMQHEGTITCLKFTPEGSHLISCSDD------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISI  106 (327)
Q Consensus        35 ~v~~w~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~  106 (327)
                      .+..||..+++..  ..+...... .+++. -++...+.||.+      ..+..||..+......- .-.... -.....
T Consensus       273 ~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~-~m~~~R-~~~~~~  348 (557)
T PHA02713        273 CILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELP-PMIKNR-CRFSLA  348 (557)
T ss_pred             CEEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCC-CCcchh-hceeEE
Confidence            5677888766432  222211111 12222 256677777753      34778888766432211 111111 111122


Q ss_pred             ecCCCEEEEEeCCC-----CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C---------------
Q psy7482         107 HPSGKLALSVGKDK-----TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------------  165 (327)
Q Consensus       107 ~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------------  165 (327)
                      .-+++..+.||.++     .+..||..+.+.....+.+.....   ...+.  -++++++.|+ +               
T Consensus       349 ~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~---~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~  423 (557)
T PHA02713        349 VIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSS---YGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSID  423 (557)
T ss_pred             EECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCccccc---ccEEE--ECCEEEEEeCCCccccccccccccccc
Confidence            23577777787654     478899887765543333332111   11222  2577777765 3               


Q ss_pred             --------CeEEEEEecCCcee--eEecCCCceeEEEeecCceEEEeCCC------CcEEEEEcCC-Cc--eeEEeeecc
Q psy7482         166 --------NKAVVFSVEKAGVL--QTLKSESKVHSVCFLNETTVCTGNEE------SAITAYNLTD-GS--HLWQIKASA  226 (327)
Q Consensus       166 --------~~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~~~l~~~~~d------~~i~i~d~~~-~~--~~~~~~~~~  226 (327)
                              ..+..||..+.+-.  ..+.....-.+++...+...+.|+.+      ..+..||..+ .+  .+..+....
T Consensus       424 ~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r  503 (557)
T PHA02713        424 MEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRL  503 (557)
T ss_pred             ccccccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccc
Confidence                    24677887765432  22222222223444445666667653      2467888876 33  233333222


Q ss_pred             cceEEEEEEecCCCcEEEEecCCC--eEEEEEcCCCc
Q psy7482         227 SRIKGLVFFSIPQETTVCTGNEES--AITAYNLTDGS  261 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~  261 (327)
                      . ..+++.   -+++..++|+.++  .+..||..+.+
T Consensus       504 ~-~~~~~~---~~~~iyv~Gg~~~~~~~e~yd~~~~~  536 (557)
T PHA02713        504 S-ALHTIL---HDNTIMMLHCYESYMLQDTFNVYTYE  536 (557)
T ss_pred             c-cceeEE---ECCEEEEEeeecceeehhhcCccccc
Confidence            2 223333   4788999999888  67778877665

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.05  E-value=0.0057  Score=51.88  Aligned_cols=179  Identities=11%  Similarity=0.084  Sum_probs=92.7

Q ss_pred             EeeeeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccc------cccccccccccEEEEEECCCCCeEEEecCCCcE
Q psy7482           6 QTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRK------QSGALMQHEGTITCLKFTPEGSHLISCSDDGSI   78 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i   78 (327)
                      ..+....  +.+.++.| +...|+.-..||.++++|+....      ......-....+....+..+|  ++.-..++.+
T Consensus        74 ~~i~w~~--~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G--ivvLt~~~~~  149 (410)
T PF04841_consen   74 SSIPWDS--GRIVGMGWTDDEELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNG--IVVLTGNNRF  149 (410)
T ss_pred             EEEEECC--CCEEEEEECCCCeEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCC--EEEECCCCeE
Confidence            3444433  78999999 66667777789999999986322      111111122223333444455  3333344444


Q ss_pred             EEEEcCCCe-EEEeEEe--c-----ccCCceee-EEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          79 AIFRVGSWQ-LEKLFKK--A-----HKGTAVNH-ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        79 ~iw~~~~~~-~~~~~~~--~-----~~~~~v~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      .+.+-.... ..+.+..  .     +....... ..++.+....+....++.+.+.+-...+.     ..    ..+++.
T Consensus       150 ~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~-----i~----~~~~i~  220 (410)
T PF04841_consen  150 YVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ-----ID----SDGPII  220 (410)
T ss_pred             EEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc-----cc----CCCCeE
Confidence            444322111 1111100  0     00000110 12333444444444445555444222111     11    123499


Q ss_pred             EEEEccCCcEEEeec-CCeEEEEEecCCceeeEecC--CCceeEEEeecCc
Q psy7482         150 SVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKS--ESKVHSVCFLNET  197 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~--~~~i~~~~~~~~~  197 (327)
                      .++.||+++++|.-. +|.+.+....-.+....+..  ......+.|..+.
T Consensus       221 ~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d  271 (410)
T PF04841_consen  221 KIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND  271 (410)
T ss_pred             EEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence            999999999998887 78988887666666666653  3566777777653

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG4499|consensus

Probab=98.01  E-value=0.0031  Score=47.35  Aligned_cols=209  Identities=12%  Similarity=0.161  Sum_probs=115.3

Q ss_pred             CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC---CEEEEEeCCCCEEEEEcCCCceeeeeec--cc
Q psy7482          66 GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG---KLALSVGKDKTLRTWNLVKGRSAYITNL--SS  140 (327)
Q Consensus        66 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~  140 (327)
                      +.++.+--..|.|.-||..+.+..+.-   -...+..++.+--.+   .+.+.++..-.|.-||...........+  -.
T Consensus        27 ~sLl~VDi~ag~v~r~D~~qn~v~ra~---ie~p~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~  103 (310)
T KOG4499|consen   27 QSLLYVDIEAGEVHRYDIEQNKVYRAK---IEGPPSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQ  103 (310)
T ss_pred             ceEEEEEeccCceehhhhhhhheEEEE---EecCcceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccC
Confidence            345555555667777888775544332   112213333343322   2333333333344566332221111111  11


Q ss_pred             cCccccceEEEEEccCCcEEEeec-C---------CeEEEEEecCCceeeEecCCCceeEEEeecC--ceEEEeCCCCcE
Q psy7482         141 YGVGFENLDSVVWSPEGLLYAIPI-Q---------NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE--TTVCTGNEESAI  208 (327)
Q Consensus       141 ~~~~~~~v~~~~~~~~~~~l~~~~-~---------~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~d~~i  208 (327)
                      ........+.-..+|+|++++... +         |.++.|-. .++....+..-.--+.++|+.+  .+.++-+.+-+|
T Consensus       104 ~d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~-~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V  182 (310)
T KOG4499|consen  104 PDRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLA-GHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEV  182 (310)
T ss_pred             chHHhcccccCccCCCCceeeeeeccccccccccccEEEEecc-CCCceeeehhccCCccccccccCcEEEEEccCceEE
Confidence            111234466777899999865542 2         23333322 1222222222334467888876  456677778888


Q ss_pred             EEEE--cCCCce-----eEEeee---cc-cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEe
Q psy7482         209 TAYN--LTDGSH-----LWQIKA---SA-SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLA  277 (327)
Q Consensus       209 ~i~d--~~~~~~-----~~~~~~---~~-~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~  277 (327)
                      .-||  ..+|..     +..++.   .. ...-.+++  +.+|.+.++.-..++|...|..+|+.+.+++-....|++++
T Consensus       183 ~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~I--D~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitscc  260 (310)
T KOG4499|consen  183 DAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTI--DTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCC  260 (310)
T ss_pred             eeeecCCCcccccCcceeEEeccCCCcCCCCCCcceE--ccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEE
Confidence            7777  555432     222221   11 11223444  26778888888889999999999999999999999999999


Q ss_pred             eeC
Q psy7482         278 SHR  280 (327)
Q Consensus       278 ~~~  280 (327)
                      |-.
T Consensus       261 FgG  263 (310)
T KOG4499|consen  261 FGG  263 (310)
T ss_pred             ecC
Confidence            987

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.00  E-value=0.0058  Score=50.12  Aligned_cols=264  Identities=11%  Similarity=0.118  Sum_probs=126.2

Q ss_pred             CCCEEEE-ecCCC--eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC
Q psy7482          23 TSKLAAS-SGADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT   99 (327)
Q Consensus        23 ~~~~l~~-~~~dg--~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~   99 (327)
                      +|+.|+- +..||  .+.+.|+.+++..+-..+.........++|+++.++-...+..|+-.|+++.+....+ ......
T Consensus        46 dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy-~~p~~~  124 (386)
T PF14583_consen   46 DGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVY-EVPDDW  124 (386)
T ss_dssp             TS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEE-E--TTE
T ss_pred             CCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEE-ECCccc
Confidence            6755554 44454  5777788888766544432222224556788888766555668888999998766555 444444


Q ss_pred             ceeeEEEe--cCCCEEEEEeC---C-------------------CCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482         100 AVNHISIH--PSGKLALSVGK---D-------------------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus       100 ~v~~~~~~--~~~~~l~~~~~---d-------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                       +-...|.  .++..++-.-.   |                   ..|.-.|+.+|+....+.....      +..+.|+|
T Consensus       125 -~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~w------lgH~~fsP  197 (386)
T PF14583_consen  125 -KGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDW------LGHVQFSP  197 (386)
T ss_dssp             -EEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-------EEEEEEET
T ss_pred             -ccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCcc------ccCcccCC
Confidence             4445564  34555433211   1                   2366667777776555544443      77889999


Q ss_pred             CC-cEEEeecCC-----eEEEEEecC-CceeeEec---CCCceeEEEeecCc-eEE-----EeCCCCcEEEEEcCCCcee
Q psy7482         156 EG-LLYAIPIQN-----KAVVFSVEK-AGVLQTLK---SESKVHSVCFLNET-TVC-----TGNEESAITAYNLTDGSHL  219 (327)
Q Consensus       156 ~~-~~l~~~~~~-----~i~i~d~~~-~~~~~~~~---~~~~i~~~~~~~~~-~l~-----~~~~d~~i~i~d~~~~~~~  219 (327)
                      .. .+++.|.+|     .-+||-+++ +.....+.   ....+.-=-|.||+ .+.     -++.+..|.-+|+.+++..
T Consensus       198 ~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~  277 (386)
T PF14583_consen  198 TDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERR  277 (386)
T ss_dssp             TEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EE
T ss_pred             CCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCce
Confidence            54 566665432     235565543 33333332   12223334467772 222     2334556777888877654


Q ss_pred             EEeeecccceEEEEEEecCCCcEEEEecCC----------------CeEEEEEcCCCceeEEeeccc---------Cc--
Q psy7482         220 WQIKASASRIKGLVFFSIPQETTVCTGNEE----------------SAITAYNLTDGSHLWHIKASA---------SR--  272 (327)
Q Consensus       220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d----------------~~i~i~d~~~~~~~~~~~~~~---------~~--  272 (327)
                      .....   + .+.-|..+++|++++-=+.|                .-|+++++..+.... +..|.         ..  
T Consensus       278 ~~~~~---p-~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~-l~~h~~sw~v~~~~~q~~  352 (386)
T PF14583_consen  278 RLMEM---P-WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRK-LARHDTSWKVLDGDRQVT  352 (386)
T ss_dssp             EEEEE-----SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEE-EEE-------BTTBSSTT
T ss_pred             EEEeC---C-ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceee-eeeccCcceeecCCCccC
Confidence            32221   1 24455546899988753333                156678887665321 21121         11  


Q ss_pred             eEEEeeeC---cEEEEEecCCcEEEEEccC
Q psy7482         273 IKGLASHR---NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       273 v~~~~~~~---~~l~~~~~dg~v~iw~~~~  299 (327)
                      =....|+|   ..|+++...|...||-++-
T Consensus       353 hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~i  382 (386)
T PF14583_consen  353 HPHPSFSPDGKWVLFRSDMEGPPAVYLVEI  382 (386)
T ss_dssp             ----EE-TTSSEEEEEE-TTSS-EEEEEE-
T ss_pred             CCCCccCCCCCEEEEECCCCCCccEEEEeC
Confidence            13467888   6677777788877775543

>KOG4441|consensus

Probab=97.98  E-value=0.0029  Score=55.88  Aligned_cols=225  Identities=16%  Similarity=0.185  Sum_probs=126.5

Q ss_pred             CCCEEEEecCCC------eEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecCC------CcEEEEEcCCCeE
Q psy7482          23 TSKLAASSGADE------TVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD------GSIAIFRVGSWQL   88 (327)
Q Consensus        23 ~~~~l~~~~~dg------~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~~~~~   88 (327)
                      .+.+++.||.++      .+..+|..+++...  .+. ....-.+++.. ++...++||.|      .++..||...++.
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W  361 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQW  361 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCce
Confidence            466778888773      68889988774332  222 22223344444 45778889888      3577888877664


Q ss_pred             EEeEEecccCCceeeEEE-ecCCCEEEEEeCCC-----CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          89 EKLFKKAHKGTAVNHISI-HPSGKLALSVGKDK-----TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      ...-  ..... -..... .-+|...++|+.||     ++-.||..+.+.....+.....     -..-.-.-+|.+.++
T Consensus       362 ~~~a--~M~~~-R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r-----~~~gv~~~~g~iYi~  433 (571)
T KOG4441|consen  362 TPVA--PMNTK-RSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRR-----SGHGVAVLGGKLYII  433 (571)
T ss_pred             eccC--CccCc-cccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcce-----eeeEEEEECCEEEEE
Confidence            3311  11111 111111 12677888898886     4778888776654433333221     111112235777777


Q ss_pred             ec-C------CeEEEEEecCCceee--EecCCCceeEEEeecCceEEEeCCCCc-----EEEEEcCCCceeEE--eeecc
Q psy7482         163 PI-Q------NKAVVFSVEKAGVLQ--TLKSESKVHSVCFLNETTVCTGNEESA-----ITAYNLTDGSHLWQ--IKASA  226 (327)
Q Consensus       163 ~~-~------~~i~i~d~~~~~~~~--~~~~~~~i~~~~~~~~~~l~~~~~d~~-----i~i~d~~~~~~~~~--~~~~~  226 (327)
                      |+ +      ..+..||..+++-..  .+.....-..++...+.+++.|+.|+.     |..||..+.+-...  +....
T Consensus       434 GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~r  513 (571)
T KOG4441|consen  434 GGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPR  513 (571)
T ss_pred             cCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCcccc
Confidence            65 3      357888887765332  333333334466666678888887763     67788776543222  22222


Q ss_pred             cceEEEEEEecCCCcEEEEecCCC-----eEEEEEcCCCc
Q psy7482         227 SRIKGLVFFSIPQETTVCTGNEES-----AITAYNLTDGS  261 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~~l~~~~~d~-----~i~i~d~~~~~  261 (327)
                      ..+ .++.   -++...++|+.||     +|..||..+.+
T Consensus       514 s~~-g~~~---~~~~ly~vGG~~~~~~l~~ve~ydp~~d~  549 (571)
T KOG4441|consen  514 SAV-GVVV---LGGKLYAVGGFDGNNNLNTVECYDPETDT  549 (571)
T ss_pred             ccc-cEEE---ECCEEEEEecccCccccceeEEcCCCCCc
Confidence            222 2232   4778888888776     46667665543

>smart00320 WD40 WD40 repeats

Probab=97.96  E-value=1.7e-05  Score=41.67  Aligned_cols=38  Identities=37%  Similarity=0.675  Sum_probs=33.0

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      ++...+..|...|.++.|.+++..+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34556667888999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PHA02713 hypothetical protein; Provisional

Probab=97.96  E-value=0.0044  Score=54.83  Aligned_cols=221  Identities=9%  Similarity=0.119  Sum_probs=114.0

Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC------CCEEEEEcCCCceeeeeeccccCccccceEE
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGRSAYITNLSSYGVGFENLDS  150 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~  150 (327)
                      .+..||..+++....- .-.....-.+++. -++...+.||.+      ..+..||..+.......+.+...   .... 
T Consensus       273 ~v~~yd~~~~~W~~l~-~mp~~r~~~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R---~~~~-  346 (557)
T PHA02713        273 CILVYNINTMEYSVIS-TIPNHIINYASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNR---CRFS-  346 (557)
T ss_pred             CEEEEeCCCCeEEECC-CCCccccceEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchh---hcee-
Confidence            5678888776533221 1111110112222 356677777753      34778888877654333222221   1121 


Q ss_pred             EEEccCCcEEEeec-C-----CeEEEEEecCCceee--EecCCCceeEEEeecCceEEEeCCC-----------------
Q psy7482         151 VVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGVLQ--TLKSESKVHSVCFLNETTVCTGNEE-----------------  205 (327)
Q Consensus       151 ~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~~~--~~~~~~~i~~~~~~~~~~l~~~~~d-----------------  205 (327)
                      + ..-++++++.|+ +     ..+..||..+.+-..  .+.....-.+++...+...+.|+.+                 
T Consensus       347 ~-~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~  425 (557)
T PHA02713        347 L-AVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDME  425 (557)
T ss_pred             E-EEECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCccccccccccccccccc
Confidence            2 223577777775 3     247889987664322  2221111122333334566667654                 


Q ss_pred             ------CcEEEEEcCCCce--eEEeeecccceEEEEEEecCCCcEEEEecCC------CeEEEEEcCC-Cc--eeEEeec
Q psy7482         206 ------SAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQETTVCTGNEE------SAITAYNLTD-GS--HLWHIKA  268 (327)
Q Consensus       206 ------~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d------~~i~i~d~~~-~~--~~~~~~~  268 (327)
                            ..+..||..+.+-  +..+...... .+++.   -+++..+.|+.+      ..+..||..+ .+  .+..+..
T Consensus       426 ~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~-~~~~~---~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~  501 (557)
T PHA02713        426 EDTHSSNKVIRYDTVNNIWETLPNFWTGTIR-PGVVS---HKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTES  501 (557)
T ss_pred             ccccccceEEEECCCCCeEeecCCCCccccc-CcEEE---ECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCc
Confidence                  2467788766532  2222111111 12333   467777777754      2467899876 33  3333433


Q ss_pred             ccCceEEEeeeCcEEEEEecCC--cEEEEEccCccCCCceeeeec
Q psy7482         269 SASRIKGLASHRNHLICITSAG--DLVVWELNEDVTREPQRVSAT  311 (327)
Q Consensus       269 ~~~~v~~~~~~~~~l~~~~~dg--~v~iw~~~~~~~~~~~~~~~~  311 (327)
                      .........+...+.++|+.+|  .+..||..+.   ++..+...
T Consensus       502 ~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~~---~W~~~~~~  543 (557)
T PHA02713        502 RLSALHTILHDNTIMMLHCYESYMLQDTFNVYTY---EWNHICHQ  543 (557)
T ss_pred             ccccceeEEECCEEEEEeeecceeehhhcCcccc---cccchhhh
Confidence            3333334445558888999888  6888888887   56555433

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.95  E-value=0.0072  Score=49.59  Aligned_cols=216  Identities=15%  Similarity=0.205  Sum_probs=105.9

Q ss_pred             EccccccccccccccccEEEE-----EECCCCCeEEEecC-C--CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC
Q psy7482          40 DMVKRKQSGALMQHEGTITCL-----KFTPEGSHLISCSD-D--GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK  111 (327)
Q Consensus        40 ~~~~~~~~~~~~~~~~~v~~~-----~~~~~~~~l~~~~~-d--~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  111 (327)
                      |..+|..+..+.........+     +|.++|+.|+.++. |  ..+.+.|+.+++..+.- .+.... .....++++++
T Consensus        16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLT-dg~g~~-~~g~~~s~~~~   93 (386)
T PF14583_consen   16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLT-DGPGDN-TFGGFLSPDDR   93 (386)
T ss_dssp             -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE----SS-B--TTT-EE-TTSS
T ss_pred             CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECc-cCCCCC-ccceEEecCCC
Confidence            555666666555433333333     45678876655444 4  45777788988876654 332222 44567788888


Q ss_pred             EEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE--ccCCcEEEeec-----------------------CC
Q psy7482         112 LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW--SPEGLLYAIPI-----------------------QN  166 (327)
Q Consensus       112 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~-----------------------~~  166 (327)
                      .++-......|.-.|+++.+....+..+..-     .-...|  +.++..++...                       ..
T Consensus        94 ~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~~-----~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~  168 (386)
T PF14583_consen   94 ALYYVKNGRSLRRVDLDTLEERVVYEVPDDW-----KGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHC  168 (386)
T ss_dssp             EEEEEETTTEEEEEETTT--EEEEEE--TTE-----EEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---E
T ss_pred             eEEEEECCCeEEEEECCcCcEEEEEECCccc-----ccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCc
Confidence            8876666678999999998877666666541     223444  33555554321                       12


Q ss_pred             eEEEEEecCCceeeEecCCCceeEEEeecC--ceEEEeCC---CC-cEEEEEcCC-CceeEEeeec-ccceEEEEEEecC
Q psy7482         167 KAVVFSVEKAGVLQTLKSESKVHSVCFLNE--TTVCTGNE---ES-AITAYNLTD-GSHLWQIKAS-ASRIKGLVFFSIP  238 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~---d~-~i~i~d~~~-~~~~~~~~~~-~~~v~~~~~~~s~  238 (327)
                      .|.-.|+.+|+....+.....+.-+.|+|.  ..++-|.+   +. .-|+|-+++ +...+.+..+ ...+..=.|. .|
T Consensus       169 ~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw-~~  247 (386)
T PF14583_consen  169 RIFTIDLKTGERKVVFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFW-VP  247 (386)
T ss_dssp             EEEEEETTT--EEEEEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE--T
T ss_pred             eEEEEECCCCceeEEEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccc-cC
Confidence            566778888888778888888999999996  55555432   22 124554432 3333333322 2233333444 48


Q ss_pred             CCcEEEE-----ecCCCeEEEEEcCCCcee
Q psy7482         239 QETTVCT-----GNEESAITAYNLTDGSHL  263 (327)
Q Consensus       239 ~~~~l~~-----~~~d~~i~i~d~~~~~~~  263 (327)
                      +|..|.-     ++.+..|.-+|+.+++..
T Consensus       248 DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~  277 (386)
T PF14583_consen  248 DGSTIWYDSYTPGGQDFWIAGYDPDTGERR  277 (386)
T ss_dssp             TSS-EEEEEEETTT--EEEEEE-TTT--EE
T ss_pred             CCCEEEEEeecCCCCceEEEeeCCCCCCce
Confidence            8887653     334556788888887654

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.91  E-value=0.012  Score=53.67  Aligned_cols=233  Identities=12%  Similarity=0.122  Sum_probs=128.1

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccccccc--------EEEEEEC----------------CCCCeEEEecCCCcE
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT--------ITCLKFT----------------PEGSHLISCSDDGSI   78 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~--------v~~~~~~----------------~~~~~l~~~~~d~~i   78 (327)
                      .+..++.++.++.|.-.|..+|+.+..+......        ...+++.                ..+..++.++.|+.+
T Consensus       193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L  272 (764)
T TIGR03074       193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL  272 (764)
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence            4556667777899999999999887765432110        1122221                134478889999999


Q ss_pred             EEEEcCCCeEEEeEEeccc--------CCc--eeeEEEec--CCCEEEEEeC----------CCCEEEEEcCCCceeeee
Q psy7482          79 AIFRVGSWQLEKLFKKAHK--------GTA--VNHISIHP--SGKLALSVGK----------DKTLRTWNLVKGRSAYIT  136 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~~--------~~~--v~~~~~~~--~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~  136 (327)
                      .-.|.++|+....+.....        ..+  -..+.-.|  .+..++.|+.          +|.|+-+|.++|+....+
T Consensus       273 iALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~  352 (764)
T TIGR03074       273 IALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW  352 (764)
T ss_pred             EEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence            9999999998876521100        000  00111112  1345666643          588999999999998887


Q ss_pred             eccccCccccceEEEEEccCCcEEEeecCC--eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEc
Q psy7482         137 NLSSYGVGFENLDSVVWSPEGLLYAIPIQN--KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNL  213 (327)
Q Consensus       137 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~  213 (327)
                      ....... ..      ..+.+.....++.+  ...-+|.+.+....-.....+    .+... .........+.|.-.|.
T Consensus       353 ~~g~p~~-~~------~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~p----d~~g~~r~~~~n~y~~slvALD~  421 (764)
T TIGR03074       353 DPGNPDP-TA------PPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTP----DQWGGDRTPADEKYSSSLVALDA  421 (764)
T ss_pred             ecCCCCc-cc------CCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccc----cccCCccccCcccccceEEEEeC
Confidence            6532211 00      01133333322211  334455544433222211110    00000 00111123556777888


Q ss_pred             CCCceeEEeeecccceEE---------EEEEecCCCc---EEEEecCCCeEEEEEcCCCceeEEee
Q psy7482         214 TDGSHLWQIKASASRIKG---------LVFFSIPQET---TVCTGNEESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~---------~~~~~s~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~  267 (327)
                      ++++....++.....+.+         +.+. ..+|+   .++.++.+|.++++|-++|+++...+
T Consensus       422 ~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~-~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~  486 (764)
T TIGR03074       422 TTGKERWVFQTVHHDLWDMDVPAQPSLVDLP-DADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE  486 (764)
T ss_pred             CCCceEEEecccCCccccccccCCceEEeee-cCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence            888887777542211111         1121 12553   78999999999999999999876543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>KOG4441|consensus

Probab=97.90  E-value=0.0077  Score=53.31  Aligned_cols=225  Identities=11%  Similarity=0.144  Sum_probs=125.2

Q ss_pred             CCCeEEEecCCC------cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC------CCEEEEEcCCCce
Q psy7482          65 EGSHLISCSDDG------SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGRS  132 (327)
Q Consensus        65 ~~~~l~~~~~d~------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~  132 (327)
                      .+..++.|+.++      .+..+|..+++....-....... -.+++.. ++...++|+.|      ..+..||..+.+.
T Consensus       284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~-~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W  361 (571)
T KOG4441|consen  284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRC-RVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQW  361 (571)
T ss_pred             CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccc-cccEEEE-CCEEEEEccccCCCcccceEEEecCCCCce
Confidence            355677787773      67888888775444331222222 3444444 45778888888      3577889888775


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec-CC-----eEEEEEecCCceeeEec--CCCceeEEEeecCceEEEeCC
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN-----KAVVFSVEKAGVLQTLK--SESKVHSVCFLNETTVCTGNE  204 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~-----~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~  204 (327)
                      ....+.......   . .+ -.-+|.+.++|+ ||     ++..||..+.+-...-.  ....-.+++.......++|+.
T Consensus       362 ~~~a~M~~~R~~---~-~v-~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~  436 (571)
T KOG4441|consen  362 TPVAPMNTKRSD---F-GV-AVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGG  436 (571)
T ss_pred             eccCCccCcccc---c-ee-EEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCc
Confidence            543333332110   1 11 122577777776 54     57778877655332222  211222233333356667774


Q ss_pred             CC------cEEEEEcCCCce--eEEeeecccceEEEEEEecCCCcEEEEecCCCe-----EEEEEcCCCc--eeEEeecc
Q psy7482         205 ES------AITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQETTVCTGNEESA-----ITAYNLTDGS--HLWHIKAS  269 (327)
Q Consensus       205 d~------~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~-----i~i~d~~~~~--~~~~~~~~  269 (327)
                      ++      .+..||..+.+-  +..+..... -..++.   -++...+.|+.|+.     +..||..+.+  .+..+...
T Consensus       437 ~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~-~~g~a~---~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~  512 (571)
T KOG4441|consen  437 DGSSNCLNSVECYDPETNTWTLIAPMNTRRS-GFGVAV---LNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSP  512 (571)
T ss_pred             CCCccccceEEEEcCCCCceeecCCcccccc-cceEEE---ECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccc
Confidence            43      467788776542  222211111 112443   57888888988763     7778877665  22223333


Q ss_pred             cCceEEEeeeCcEEEEEecCCc-----EEEEEccCc
Q psy7482         270 ASRIKGLASHRNHLICITSAGD-----LVVWELNED  300 (327)
Q Consensus       270 ~~~v~~~~~~~~~l~~~~~dg~-----v~iw~~~~~  300 (327)
                      ...+..........+.|+.||.     |..||...+
T Consensus       513 rs~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d  548 (571)
T KOG4441|consen  513 RSAVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETD  548 (571)
T ss_pred             cccccEEEECCEEEEEecccCccccceeEEcCCCCC
Confidence            3333334444478888888864     778887777

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.84  E-value=0.0082  Score=46.84  Aligned_cols=166  Identities=10%  Similarity=0.178  Sum_probs=115.1

Q ss_pred             ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS  172 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d  172 (327)
                      .+.... +.++.|+|+.+.|++......-.++=-.+|+.+..+++....    ....+.+..+|++.++-. ++.+.++.
T Consensus        82 ~g~~~n-vS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~----DpE~Ieyig~n~fvi~dER~~~l~~~~  156 (316)
T COG3204          82 LGETAN-VSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFS----DPETIEYIGGNQFVIVDERDRALYLFT  156 (316)
T ss_pred             cccccc-ccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccC----ChhHeEEecCCEEEEEehhcceEEEEE
Confidence            344555 999999999999998888777777766789988888877652    256788887887777776 88888887


Q ss_pred             ecCCceeeE-------ec---C-CCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCcee---EEeeec-------ccceE
Q psy7482         173 VEKAGVLQT-------LK---S-ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHL---WQIKAS-------ASRIK  230 (327)
Q Consensus       173 ~~~~~~~~~-------~~---~-~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~-------~~~v~  230 (327)
                      +........       +.   + +.....++|.|. +.|+.+-+..-+.||........   +....+       -..+.
T Consensus       157 vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvS  236 (316)
T COG3204         157 VDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVS  236 (316)
T ss_pred             EcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccc
Confidence            765532211       11   2 567889999997 88888888888888877643311   111111       22466


Q ss_pred             EEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe
Q psy7482         231 GLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI  266 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  266 (327)
                      ++.|.+ +.+.+|+-+.+++.+.-.|.. |..+..+
T Consensus       237 gl~~~~-~~~~LLVLS~ESr~l~Evd~~-G~~~~~l  270 (316)
T COG3204         237 GLEFNA-ITNSLLVLSDESRRLLEVDLS-GEVIELL  270 (316)
T ss_pred             cceecC-CCCcEEEEecCCceEEEEecC-CCeeeeE
Confidence            777764 677788888888888888864 4434433

>KOG2395|consensus

Probab=97.84  E-value=0.00044  Score=57.75  Aligned_cols=136  Identities=10%  Similarity=0.085  Sum_probs=96.5

Q ss_pred             EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc--------EEEeecCCeEEEEEecCCce--ee--
Q psy7482         113 ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL--------LYAIPIQNKAVVFSVEKAGV--LQ--  180 (327)
Q Consensus       113 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~l~~~~~~~i~i~d~~~~~~--~~--  180 (327)
                      +.++.....++-.|++.|+.+....+...      |.-+.+.|+.+        .|+.-+++.|.-||.+-...  +.  
T Consensus       349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d------i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~  422 (644)
T KOG2395|consen  349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD------INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVV  422 (644)
T ss_pred             eeCCCCcCcceeeecccceeeeEeeccCC------cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeee
Confidence            44455566789999999999888877765      77777887652        34444588999999874322  11  


Q ss_pred             ---EecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         181 ---TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       181 ---~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                         .+.......|++-..++++++|+.+|.|++||--..+...-+++-..+|..+...  .+|+++++.+. ..+.+.++
T Consensus       423 q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvt--adGKwil~Tc~-tyLlLi~t  499 (644)
T KOG2395|consen  423 QSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVT--ADGKWILATCK-TYLLLIDT  499 (644)
T ss_pred             eccccccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEee--ccCcEEEEecc-cEEEEEEE
Confidence               1224456777777778999999999999999973333334467778899999984  89998876654 55666554

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.83  E-value=0.001  Score=59.83  Aligned_cols=146  Identities=7%  Similarity=0.031  Sum_probs=95.9

Q ss_pred             CCeEEE-ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec-----CCCEEEEEeCCCCEEEEEcCCCc-eeeeeec
Q psy7482          66 GSHLIS-CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP-----SGKLALSVGKDKTLRTWNLVKGR-SAYITNL  138 (327)
Q Consensus        66 ~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~  138 (327)
                      .++|+. ......|+-.|++.|+.+..+ ..+...+|..++-..     ....-+.|-.+..+..||++-.. .+.....
T Consensus       493 ~~mil~~~~~~~~ly~mDLe~GKVV~eW-~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~  571 (794)
T PF08553_consen  493 RNMILLDPNNPNKLYKMDLERGKVVEEW-KVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS  571 (794)
T ss_pred             cceEeecCCCCCceEEEecCCCcEEEEe-ecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence            334443 344578999999999999999 555544355443211     12345667778899999998643 1111111


Q ss_pred             cccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEc
Q psy7482         139 SSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNL  213 (327)
Q Consensus       139 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~  213 (327)
                      ... .......|++-+.+|.+.+.+.+|.|++||--..+....++ ...+|..+..+.|+..+.+..+..+.+++.
T Consensus       572 k~Y-~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t  646 (794)
T PF08553_consen  572 KQY-SSKNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDT  646 (794)
T ss_pred             ccc-ccCCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEE
Confidence            111 12334788888888865555559999999954333333444 578999999999987777777888888885

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.80  E-value=0.0068  Score=53.67  Aligned_cols=179  Identities=12%  Similarity=0.130  Sum_probs=97.3

Q ss_pred             eeeEEEecCCCEEEEEe------CCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCC------
Q psy7482         101 VNHISIHPSGKLALSVG------KDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN------  166 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~------~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------  166 (327)
                      +...+++|+|+.++...      .|.  .|.+++.. +.. ..+....      ....-.|+|+|..+++..++      
T Consensus       352 vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~g~------~~t~PsWspDG~~lw~v~dg~~~~~v  423 (591)
T PRK13616        352 ITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLEGH------SLTRPSWSLDADAVWVVVDGNTVVRV  423 (591)
T ss_pred             cccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeecCC------CCCCceECCCCCceEEEecCcceEEE
Confidence            78889999999887665      243  44444542 222 2221111      16778899998866665432      


Q ss_pred             -------eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEE---EEcCCCce-e---EEeee-cccceE
Q psy7482         167 -------KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITA---YNLTDGSH-L---WQIKA-SASRIK  230 (327)
Q Consensus       167 -------~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i---~d~~~~~~-~---~~~~~-~~~~v~  230 (327)
                             .+.+.++..++...  .....|..+.|+|| .+++... ++.|++   -....+.. +   ..+.. -...+.
T Consensus       424 ~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~  500 (591)
T PRK13616        424 IRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAV  500 (591)
T ss_pred             eccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccc
Confidence                   33333443333322  33567999999999 4444433 467776   44344431 1   11222 223357


Q ss_pred             EEEEEecCCCcEEEEecCCCeEEEEEcCC-CceeEEeec--ccCceEEEeeeCcEEEEEecCCcEE
Q psy7482         231 GLVFFSIPQETTVCTGNEESAITAYNLTD-GSHLWHIKA--SASRIKGLASHRNHLICITSAGDLV  293 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~dg~v~  293 (327)
                      ++.|.  .++.+ +++..++.-.+|.+.- |.....+..  ...++..++-++..++....+|.+.
T Consensus       501 ~l~W~--~~~~L-~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~~iyv~~~~g~~~  563 (591)
T PRK13616        501 SLDWR--TGDSL-VVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPSTVYVTDARAVLQ  563 (591)
T ss_pred             cceEe--cCCEE-EEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCceEEEEcCCceEE
Confidence            88995  56664 4555555444554432 222222222  2456777777775566666676443

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=97.80  E-value=0.016  Score=48.83  Aligned_cols=253  Identities=12%  Similarity=0.161  Sum_probs=156.1

Q ss_pred             EEEEEccccccccccccccccEEEEEECCCCCeEEEecC-CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEE
Q psy7482          36 VVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLAL  114 (327)
Q Consensus        36 v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  114 (327)
                      +.+++..+.+....+..+. ....+...+++..+..... ...+...+.......... ...... ...++.++.+..++
T Consensus        13 ~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~-~~g~~~-p~~i~v~~~~~~vy   89 (381)
T COG3391          13 VSVINTGTNKVTAAISLGR-GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSL-SVGGVY-PAGVAVNPAGNKVY   89 (381)
T ss_pred             eEEEeecccEEEEEeecCC-CCceeEEcCccCEEEEEeecCceeeecccccceeeeec-cCCCcc-ccceeeCCCCCeEE
Confidence            5555555544444433222 4556777888755444332 224555554422222211 111122 46778888877555


Q ss_pred             EE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec----CCeEEEEEecCCceeeEecCCCcee
Q psy7482         115 SV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVEKAGVLQTLKSESKVH  189 (327)
Q Consensus       115 ~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~~~~~~~~~~~~~~i~  189 (327)
                      .. ..++.|.+.|..+.+..........      ...++++|+++.+.++.    ++.+.+.|..+++......-.....
T Consensus        90 v~~~~~~~v~vid~~~~~~~~~~~vG~~------P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~  163 (381)
T COG3391          90 VTTGDSNTVSVIDTATNTVLGSIPVGLG------PVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPT  163 (381)
T ss_pred             EecCCCCeEEEEcCcccceeeEeeeccC------CceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcc
Confidence            44 4468999999877776666555543      77899999997766653    4789999999999888866333338


Q ss_pred             EEEeecC-c-eEEEeCCCCcEEEEEcCCCceeE-----EeeecccceEEEEEEecCCCcEEEEecCC---CeEEEEEcCC
Q psy7482         190 SVCFLNE-T-TVCTGNEESAITAYNLTDGSHLW-----QIKASASRIKGLVFFSIPQETTVCTGNEE---SAITAYNLTD  259 (327)
Q Consensus       190 ~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~-----~~~~~~~~v~~~~~~~s~~~~~l~~~~~d---~~i~i~d~~~  259 (327)
                      .++++|+ + .+++-..++.+.+.|.......+     ....... ...+.+  +++|.++......   +.+...|..+
T Consensus       164 ~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~-P~~i~v--~~~g~~~yV~~~~~~~~~v~~id~~~  240 (381)
T COG3391         164 GVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTG-PAGIAV--DPDGNRVYVANDGSGSNNVLKIDTAT  240 (381)
T ss_pred             eEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCC-CceEEE--CCCCCEEEEEeccCCCceEEEEeCCC
Confidence            9999998 4 34455589999999976655442     1222222 345566  4888866654433   5899999888


Q ss_pred             CceeEEeecccC-ceEEEeeeC--cEEEEEe-cCCcEEEEEccCc
Q psy7482         260 GSHLWHIKASAS-RIKGLASHR--NHLICIT-SAGDLVVWELNED  300 (327)
Q Consensus       260 ~~~~~~~~~~~~-~v~~~~~~~--~~l~~~~-~dg~v~iw~~~~~  300 (327)
                      +.....-..-.. ....+..+|  ..+.+.. ..+.+.+-|....
T Consensus       241 ~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~  285 (381)
T COG3391         241 GNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATD  285 (381)
T ss_pred             ceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCC
Confidence            876654221111 456677788  5555553 3477888887776

>KOG2079|consensus

Probab=97.77  E-value=0.0012  Score=59.97  Aligned_cols=99  Identities=13%  Similarity=0.168  Sum_probs=71.7

Q ss_pred             CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCC
Q psy7482         109 SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SES  186 (327)
Q Consensus       109 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~  186 (327)
                      .+..++.|+..|.+...|+... ..+   .........+|.+++|+.+|..++.|. +|.|.+||+..++..+.+. +..
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~n-L~~---~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~a  173 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGN-LGP---LHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGA  173 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcc-cch---hhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCC
Confidence            4567888999999999997643 111   222233356799999999999999997 9999999999999988887 555


Q ss_pred             ceeEEEe---ecC-ceEEEeCCCCcEEEEEc
Q psy7482         187 KVHSVCF---LNE-TTVCTGNEESAITAYNL  213 (327)
Q Consensus       187 ~i~~~~~---~~~-~~l~~~~~d~~i~i~d~  213 (327)
                      +.+.+-+   ..+ ..++++...|.  +|.+
T Consensus       174 p~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  174 PVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             ccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            5444433   334 56778877776  4543

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.75  E-value=0.022  Score=48.78  Aligned_cols=231  Identities=14%  Similarity=0.201  Sum_probs=121.1

Q ss_pred             CCCEEEEe-cCC----CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCC-----------cEEEEEcCCC
Q psy7482          23 TSKLAASS-GAD----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG-----------SIAIFRVGSW   86 (327)
Q Consensus        23 ~~~~l~~~-~~d----g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----------~i~iw~~~~~   86 (327)
                      +++++|-+ +..    ..+++.|+.+++.+...-. ...-..+.|.++++.|+....+.           .|+.|++.+.
T Consensus       134 dg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~-~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~  212 (414)
T PF02897_consen  134 DGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIE-NPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTP  212 (414)
T ss_dssp             TSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEE-EEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-
T ss_pred             CCCEEEEEecCCCCceEEEEEEECCCCcCcCCccc-ccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCC
Confidence            89988744 333    4599999999976543211 11122399999988776554332           3788888766


Q ss_pred             eEE--EeEEecccCCc-eeeEEEecCCCEEEEEeCC----CCEEEEEcCCC----ceeeeeeccccCccccceEEEEEcc
Q psy7482          87 QLE--KLFKKAHKGTA-VNHISIHPSGKLALSVGKD----KTLRTWNLVKG----RSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        87 ~~~--~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      ...  ..+ ....... ...+..++++++++.....    ..+.+.++..+    .....+.....     .+....-+.
T Consensus       213 ~~~d~lvf-e~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~-----~~~~~v~~~  286 (414)
T PF02897_consen  213 QSEDELVF-EEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPRED-----GVEYYVDHH  286 (414)
T ss_dssp             GGG-EEEE-C-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSS-----S-EEEEEEE
T ss_pred             hHhCeeEE-eecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCC-----ceEEEEEcc
Confidence            433  333 3333332 4578889999987765432    34778888764    11122211111     122222222


Q ss_pred             CCcEEEeec----CCeEEEEEecCCce---e-eEecCCC--ceeEEEeecCceEEEeCCCC--cEEEEEcCCCceeEEee
Q psy7482         156 EGLLYAIPI----QNKAVVFSVEKAGV---L-QTLKSES--KVHSVCFLNETTVCTGNEES--AITAYNLTDGSHLWQIK  223 (327)
Q Consensus       156 ~~~~l~~~~----~~~i~i~d~~~~~~---~-~~~~~~~--~i~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~  223 (327)
                      .+.+++...    .+.|...++.+...   . ..+.+..  .+..+....+.+++....++  .|+++++..+.....+.
T Consensus       287 ~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~  366 (414)
T PF02897_consen  287 GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKESREIP  366 (414)
T ss_dssp             TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEEEEEEE
T ss_pred             CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcEEeeec
Confidence            455555443    46787788777653   2 2233433  46666665555555554444  57888987344444433


Q ss_pred             e-cccceEEEEEEecCCCcEEE-E-ec--CCCeEEEEEcCCCce
Q psy7482         224 A-SASRIKGLVFFSIPQETTVC-T-GN--EESAITAYNLTDGSH  262 (327)
Q Consensus       224 ~-~~~~v~~~~~~~s~~~~~l~-~-~~--~d~~i~i~d~~~~~~  262 (327)
                      . ..+.+..+..  .+++..+. . .+  .-+++..||+.+++.
T Consensus       367 ~p~~g~v~~~~~--~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~  408 (414)
T PF02897_consen  367 LPEAGSVSGVSG--DFDSDELRFSYSSFTTPPTVYRYDLATGEL  408 (414)
T ss_dssp             SSSSSEEEEEES---TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred             CCcceEEeccCC--CCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence            2 2233444433  23443332 2 22  135688888887764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.74  E-value=0.019  Score=47.80  Aligned_cols=222  Identities=13%  Similarity=0.182  Sum_probs=102.9

Q ss_pred             eEEEeEEecccCCceeeEEEe-----------cCCCEEEEEe-CCCCEEEEEcCCC----ceeeeeecccc--Cccccce
Q psy7482          87 QLEKLFKKAHKGTAVNHISIH-----------PSGKLALSVG-KDKTLRTWNLVKG----RSAYITNLSSY--GVGFENL  148 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~-----------~~~~~l~~~~-~dg~i~iwd~~~~----~~~~~~~~~~~--~~~~~~v  148 (327)
                      +.+..+...+.+.+....-|+           .+.++|+..+ ..+.|+++|+.+.    +....+.....  .......
T Consensus        53 qVIhrl~mp~~GDElHH~GWNaCSsc~~~~~~~~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~P  132 (461)
T PF05694_consen   53 QVIHRLPMPNRGDELHHSGWNACSSCHYGDPSKERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRP  132 (461)
T ss_dssp             SEEEEEE-SSS---B---EES--GGSTT--TT--S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEE
T ss_pred             cEEEEEeCCCCCCccccccCcccccccCCCCcccCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCC
Confidence            455555444443335555554           2355677666 6789999998742    22222221011  1112234


Q ss_pred             EEEEEccCCcEEEeec-------CCeEEEEEecCCceeeEecC----CCceeEEEeecC-ceEEEeC-------------
Q psy7482         149 DSVVWSPEGLLYAIPI-------QNKAVVFSVEKAGVLQTLKS----ESKVHSVCFLNE-TTVCTGN-------------  203 (327)
Q Consensus       149 ~~~~~~~~~~~l~~~~-------~~~i~i~d~~~~~~~~~~~~----~~~i~~~~~~~~-~~l~~~~-------------  203 (327)
                      ..+..-|+|++++++-       .|.+.++|-++.+.......    ...-..+-|.|. +.+++..             
T Consensus       133 HT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~  212 (461)
T PF05694_consen  133 HTVHCLPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNP  212 (461)
T ss_dssp             EEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---T
T ss_pred             ceeeecCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCCh
Confidence            5566678998887752       25788999888888777763    223455666776 6666652             


Q ss_pred             -------CCCcEEEEEcCCCceeEEeeecc--cceEEEEEEecCCCcEEEEec-CCCeEEEEEc-CCCc----eeEEeec
Q psy7482         204 -------EESAITAYNLTDGSHLWQIKASA--SRIKGLVFFSIPQETTVCTGN-EESAITAYNL-TDGS----HLWHIKA  268 (327)
Q Consensus       204 -------~d~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~-~~~~----~~~~~~~  268 (327)
                             ...++.+||+++.+.++++.-..  .....+.|...|+..+=++++ -...|..|-- +.++    .+.++..
T Consensus       213 ~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~  292 (461)
T PF05694_consen  213 EDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPA  292 (461)
T ss_dssp             TTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--
T ss_pred             hHhhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCC
Confidence                   24579999999999999886543  245677776556665544333 3444544433 4443    2222221


Q ss_pred             c-----------------cCceEEEeeeC--cEEEEEe-cCCcEEEEEccCccCCCceeeee
Q psy7482         269 S-----------------ASRIKGLASHR--NHLICIT-SAGDLVVWELNEDVTREPQRVSA  310 (327)
Q Consensus       269 ~-----------------~~~v~~~~~~~--~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~  310 (327)
                      .                 ..-|++|..|.  ++|.... .+|.|+.||+....  .|+....
T Consensus       293 ~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~--~Pkl~gq  352 (461)
T PF05694_consen  293 KKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPF--NPKLVGQ  352 (461)
T ss_dssp             EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTT--S-EEEEE
T ss_pred             cccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCC--CCcEEeE
Confidence            1                 23467888887  5555444 68999999999874  5555543

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.73  E-value=0.013  Score=45.74  Aligned_cols=171  Identities=11%  Similarity=0.184  Sum_probs=115.4

Q ss_pred             cccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC
Q psy7482          50 LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        50 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  129 (327)
                      +.+-...+.++.|+|+.+.|++......-.++=..+|+.+.+++...-.. .-.+.+..++++.++--.++.+.++.+..
T Consensus        81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~D-pE~Ieyig~n~fvi~dER~~~l~~~~vd~  159 (316)
T COG3204          81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSD-PETIEYIGGNQFVIVDERDRALYLFTVDA  159 (316)
T ss_pred             cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCC-hhHeEEecCCEEEEEehhcceEEEEEEcC
Confidence            34445559999999999999988888888888777899998885444444 67788988888888777889999888766


Q ss_pred             Cceee-----eeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe---c-C-------CCceeEEE
Q psy7482         130 GRSAY-----ITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL---K-S-------ESKVHSVC  192 (327)
Q Consensus       130 ~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~---~-~-------~~~i~~~~  192 (327)
                      .....     .+++............++|+|....|.++- .+-+.||.+......-..   . +       -..+.++.
T Consensus       160 ~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~  239 (316)
T COG3204         160 DTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLE  239 (316)
T ss_pred             CccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccce
Confidence            53221     223333332244588999999888877776 555666665533211111   0 1       23466778


Q ss_pred             eecC--ceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482         193 FLNE--TTVCTGNEESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       193 ~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~  222 (327)
                      |.+.  .+++.+.+++.+.-.|.. +.++..+
T Consensus       240 ~~~~~~~LLVLS~ESr~l~Evd~~-G~~~~~l  270 (316)
T COG3204         240 FNAITNSLLVLSDESRRLLEVDLS-GEVIELL  270 (316)
T ss_pred             ecCCCCcEEEEecCCceEEEEecC-CCeeeeE
Confidence            8865  567777888888888864 4444443

>KOG2395|consensus

Probab=97.71  E-value=0.0012  Score=55.29  Aligned_cols=142  Identities=12%  Similarity=0.131  Sum_probs=96.7

Q ss_pred             EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCC-------eEEEecCCCcEEEEEcCCCeE-EEeEEecc-
Q psy7482          26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-------HLISCSDDGSIAIFRVGSWQL-EKLFKKAH-   96 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~-   96 (327)
                      +|.++.....++=.|++.|+.+....-+.. |+-+.+.|+.+       .-+.|-.|..|.-||.+-... .......| 
T Consensus       348 il~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kq  426 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQ  426 (644)
T ss_pred             EeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccc
Confidence            344566667788889999999988887666 88888888653       234566788899999863211 11111222 


Q ss_pred             --cCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEec
Q psy7482          97 --KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVE  174 (327)
Q Consensus        97 --~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~  174 (327)
                        .+....|.+-..+| ++++|+.+|.|++||- .+..... .++..   ..+|..+..+.+|+++++..+..+.+.++.
T Consensus       427 y~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKT-AlPgL---G~~I~hVdvtadGKwil~Tc~tyLlLi~t~  500 (644)
T KOG2395|consen  427 YSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKT-ALPGL---GDAIKHVDVTADGKWILATCKTYLLLIDTL  500 (644)
T ss_pred             cccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhh-ccccc---CCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence              12225566555555 8999999999999996 4433222 23333   245999999999999999989999888864

>smart00320 WD40 WD40 repeats

Probab=97.67  E-value=0.0002  Score=37.28  Aligned_cols=38  Identities=34%  Similarity=0.679  Sum_probs=31.7

Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN  126 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  126 (327)
                      +....+ ..|... |.++.|.+++..+++++.|+.+++|+
T Consensus         3 ~~~~~~-~~~~~~-i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTL-KGHTGP-VTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEE-EecCCc-eeEEEECCCCCEEEEecCCCeEEEcC
Confidence            445555 566666 99999999889999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG2079|consensus

Probab=97.60  E-value=0.0055  Score=55.90  Aligned_cols=111  Identities=20%  Similarity=0.281  Sum_probs=80.0

Q ss_pred             CccEEEEEeCCCEEEEecCCCeEEEEEcccc-ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          14 TASVRSVAATSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        14 ~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      ...+.+.+..+..++.|+..|.+...|.... .+...=..-.++|++++|+.+|..++.|-.+|.|.+||...++..+.+
T Consensus        89 ~~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i  168 (1206)
T KOG2079|consen   89 AAGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVI  168 (1206)
T ss_pred             CcceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeee
Confidence            3445555667778888998999998887543 222222234678999999999999999999999999999998888877


Q ss_pred             EecccCC--ceeeEEEecCCCEEEEEeCCCCEEEEEc
Q psy7482          93 KKAHKGT--AVNHISIHPSGKLALSVGKDKTLRTWNL  127 (327)
Q Consensus        93 ~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~  127 (327)
                       ..+..+  .|..+.+..++..++++...|.  +|.+
T Consensus       169 -~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  169 -TEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             -eecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence             444333  2444455556667888877775  5654

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.59  E-value=0.039  Score=50.51  Aligned_cols=190  Identities=13%  Similarity=0.198  Sum_probs=116.3

Q ss_pred             CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc---ccceEEEEEcc----------------CCcEEEee-cCCeEE
Q psy7482         110 GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG---FENLDSVVWSP----------------EGLLYAIP-IQNKAV  169 (327)
Q Consensus       110 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~----------------~~~~l~~~-~~~~i~  169 (327)
                      +..++.++.++.|.-.|.++|+.+..+........   ....+.+++..                .+..+..+ .|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            55788888889999999999999888765543110   00012222211                12344445 499999


Q ss_pred             EEEecCCceeeEecCCCcee-------------EEEeec---CceEEEeCC----------CCcEEEEEcCCCceeEEee
Q psy7482         170 VFSVEKAGVLQTLKSESKVH-------------SVCFLN---ETTVCTGNE----------ESAITAYNLTDGSHLWQIK  223 (327)
Q Consensus       170 i~d~~~~~~~~~~~~~~~i~-------------~~~~~~---~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~  223 (327)
                      -.|.++|+.+..+..++.+.             .+.-.|   ++.+++|+.          +|.|+-+|.++|+.+..+.
T Consensus       274 ALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~  353 (764)
T TIGR03074       274 ALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWD  353 (764)
T ss_pred             EEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEe
Confidence            99999999998776433321             112223   356666642          6889999999999988764


Q ss_pred             ec---------ccc--------e-EEEEEEecCCCcEEEEe------------------cCCCeEEEEEcCCCceeEEee
Q psy7482         224 AS---------ASR--------I-KGLVFFSIPQETTVCTG------------------NEESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       224 ~~---------~~~--------v-~~~~~~~s~~~~~l~~~------------------~~d~~i~i~d~~~~~~~~~~~  267 (327)
                      .-         .+.        + ...++  +++...+..+                  ...+.|.-.|.++|+..+.++
T Consensus       354 ~g~p~~~~~~~~g~~~~~gg~n~W~~~s~--D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q  431 (764)
T TIGR03074       354 PGNPDPTAPPAPGETYTRNTPNSWSVASY--DEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQ  431 (764)
T ss_pred             cCCCCcccCCCCCCEeccCCCCccCceEE--cCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEec
Confidence            21         000        0 11122  1222232221                  123567888999999988887


Q ss_pred             cccCce-----------EEEee-eC---cEEEEEecCCcEEEEEccCcc
Q psy7482         268 ASASRI-----------KGLAS-HR---NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       268 ~~~~~v-----------~~~~~-~~---~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      .....+           ..+.. ..   ..++.++.+|.+.+.|..++.
T Consensus       432 ~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~  480 (764)
T TIGR03074       432 TVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGE  480 (764)
T ss_pred             ccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCC
Confidence            522222           22322 22   488999999999999999873

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=97.59  E-value=0.034  Score=46.79  Aligned_cols=195  Identities=15%  Similarity=0.194  Sum_probs=117.7

Q ss_pred             CeEEEecCCCcEEEEEcCCCeEEEeEEecc-cCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc
Q psy7482          67 SHLISCSDDGSIAIFRVGSWQLEKLFKKAH-KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF  145 (327)
Q Consensus        67 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  145 (327)
                      ..++.+..+|.|.-.|.++++.+....... ... +..-.+..+|+ ++.++.+|.+..+|.++|+......... .   
T Consensus        69 g~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~-~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~-~---  142 (370)
T COG1520          69 GTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQ-LSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGG-S---  142 (370)
T ss_pred             CeEEEecCCCcEEEEeCCCCcEEecccCcCccee-ccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCC-C---
Confidence            345566888888888998888664431221 111 33333333665 7778888999999998899888877666 0   


Q ss_pred             cceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecCCCc----eeEEEeecCceEEEeCC--CCcEEEEEcCCCcee
Q psy7482         146 ENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESK----VHSVCFLNETTVCTGNE--ESAITAYNLTDGSHL  219 (327)
Q Consensus       146 ~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~----i~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~  219 (327)
                      ..+..-..-.++..+....++.+...|..+++.........+    +..-....++.+..+..  ++.+.-.|..++...
T Consensus       143 ~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~  222 (370)
T COG1520         143 PYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTLK  222 (370)
T ss_pred             eEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcEe
Confidence            112222333345444444578898888888888777553221    11111122356666666  667888888888877


Q ss_pred             EEeeeccc----ceEEEEEEecCC-----CcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482         220 WQIKASAS----RIKGLVFFSIPQ-----ETTVCTGNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       220 ~~~~~~~~----~v~~~~~~~s~~-----~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                      ...+.+..    .+......  ..     +.-+..++.++.+...|..+++.++.+...
T Consensus       223 w~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~  279 (370)
T COG1520         223 WSQKVSQTIGRTAISTTPAV--DGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPAG  279 (370)
T ss_pred             eeeeeecccCcccccccccc--cCceEEECCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence            66432111    11001110  11     222356667788999999999999888864

>KOG2444|consensus

Probab=97.52  E-value=0.00024  Score=52.83  Aligned_cols=139  Identities=13%  Similarity=0.061  Sum_probs=83.6

Q ss_pred             EEEeecCCeEEEEEecCCceeeEecCCCceeEEEeec--CceEEEeCCCCcEEEEEcCCCcee-EEeeecccceEEEEEE
Q psy7482         159 LYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLN--ETTVCTGNEESAITAYNLTDGSHL-WQIKASASRIKGLVFF  235 (327)
Q Consensus       159 ~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~v~~~~~~  235 (327)
                      +++...++.+.-++++.-+.-..-.  ..+.+..-.+  +..+++|+.+|.|.+|+....... ..+..-...+.++.-.
T Consensus        33 l~~~sa~~~v~~~~~~k~k~s~rse--~~~~e~~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~  110 (238)
T KOG2444|consen   33 LRATSADGLVRERKVRKHKESCRSE--RFIDEGQRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPN  110 (238)
T ss_pred             hccccCCcccccchhhhhhhhhhhh--hhhhcceeecccCceEEeecccceEEEecCCccchHHHhhhcccccceecccc
Confidence            4455557888777766443221111  1111111112  367899999999999987622111 1111122223322211


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc-CceEEEeeeC--cEEEEE--ecCCcEEEEEccCc
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA-SRIKGLASHR--NHLICI--TSAGDLVVWELNED  300 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~--~~l~~~--~~dg~v~iw~~~~~  300 (327)
                       ..++.+..+++.||.|+.|++.-.+.+.....|+ .++..+....  ..++.+  |.|..++.|++..-
T Consensus       111 -~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  111 -GRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             -ccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence             1345578899999999999999888888777777 5555554444  677777  77777888887664

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.50  E-value=0.035  Score=44.67  Aligned_cols=225  Identities=12%  Similarity=0.181  Sum_probs=103.1

Q ss_pred             cEEEEEe-CCCEEEEecCCCeEEEEEccccccccccc---cccccEEEEEECCCCCeEEEecCCCcEEEEEc-CCCeEEE
Q psy7482          16 SVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM---QHEGTITCLKFTPEGSHLISCSDDGSIAIFRV-GSWQLEK   90 (327)
Q Consensus        16 ~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~-~~~~~~~   90 (327)
                      ...++.| +.+.+++ +..+. .+.....++.-..+.   .-.+....+....++..++. +..|.  ||.. +.|+.-+
T Consensus        63 ~l~~I~f~~~~g~iv-G~~g~-ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l~-~~~G~--iy~T~DgG~tW~  137 (302)
T PF14870_consen   63 HLNSISFDGNEGWIV-GEPGL-LLHTTDGGKTWERVPLSSKLPGSPFGITALGDGSAELA-GDRGA--IYRTTDGGKTWQ  137 (302)
T ss_dssp             EEEEEEEETTEEEEE-EETTE-EEEESSTTSS-EE----TT-SS-EEEEEEEETTEEEEE-ETT----EEEESSTTSSEE
T ss_pred             eEEEEEecCCceEEE-cCCce-EEEecCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEEE-cCCCc--EEEeCCCCCCee
Confidence            3567777 4444444 44553 333333333222211   11222333333334433333 34444  3433 2333333


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEE
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVV  170 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i  170 (327)
                      .+.....+. +..+.-+++|++++++.....+.-||.-...........     ...+..|.|.|++.+.+++..|.++.
T Consensus       138 ~~~~~~~gs-~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~-----~~riq~~gf~~~~~lw~~~~Gg~~~~  211 (302)
T PF14870_consen  138 AVVSETSGS-INDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNS-----SRRIQSMGFSPDGNLWMLARGGQIQF  211 (302)
T ss_dssp             EEE-S-----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--S-----SS-EEEEEE-TTS-EEEEETTTEEEE
T ss_pred             EcccCCcce-eEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCc-----cceehhceecCCCCEEEEeCCcEEEE
Confidence            332344455 888888999998888876555567775432222221111     23499999999999888887888887


Q ss_pred             EEe-cCCceeeE----ec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEee---ecccceEEEEEEecCCCc
Q psy7482         171 FSV-EKAGVLQT----LK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIK---ASASRIKGLVFFSIPQET  241 (327)
Q Consensus       171 ~d~-~~~~~~~~----~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~s~~~~  241 (327)
                      =+. ...+....    +. ....+..++|.+++.+.+++..|.+. .....++.=+..+   .-...++.+.|.  ++.+
T Consensus       212 s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~-~S~DgGktW~~~~~~~~~~~n~~~i~f~--~~~~  288 (302)
T PF14870_consen  212 SDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLL-VSTDGGKTWQKDRVGENVPSNLYRIVFV--NPDK  288 (302)
T ss_dssp             EE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT-EE-EESSTTSS-EE-GGGTTSSS---EEEEE--ETTE
T ss_pred             ccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCCccEE-EeCCCCccceECccccCCCCceEEEEEc--CCCc
Confidence            762 22222111    11 23348899999886665566666543 4444554432222   223468889996  3344


Q ss_pred             EEEEecCCCeEEEE
Q psy7482         242 TVCTGNEESAITAY  255 (327)
Q Consensus       242 ~l~~~~~d~~i~i~  255 (327)
                      -++. +.+|.|.-|
T Consensus       289 gf~l-G~~G~ll~~  301 (302)
T PF14870_consen  289 GFVL-GQDGVLLRY  301 (302)
T ss_dssp             EEEE--STTEEEEE
T ss_pred             eEEE-CCCcEEEEe
Confidence            4444 456766544

>KOG2444|consensus

Probab=97.50  E-value=0.00083  Score=50.05  Aligned_cols=106  Identities=15%  Similarity=0.154  Sum_probs=68.9

Q ss_pred             CCCEEEEecCCCeEEEEEccccccc-cccccccccEEEE-EECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCc
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQS-GALMQHEGTITCL-KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA  100 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~-~~~~~~~~~v~~~-~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~  100 (327)
                      -+..++.|+.+|.|.+|+....-.. .....-...|-++ .--.++.+..+++.||.|+.|++.-++.+... ..|...+
T Consensus        69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~-g~h~~~~  147 (238)
T KOG2444|consen   69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV-GQHNFES  147 (238)
T ss_pred             cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeee-ccccCCC
Confidence            4567888999999999987622111 1111122233332 22224557889999999999999988877776 5555333


Q ss_pred             eeeEEEecCCCEEEEE--eCCCCEEEEEcCC
Q psy7482         101 VNHISIHPSGKLALSV--GKDKTLRTWNLVK  129 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~--~~dg~i~iwd~~~  129 (327)
                      +.....+..++.+..+  +.|..++.|++..
T Consensus       148 ~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  148 GEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             cceeEEecCCceEEeeccccchhhhhcchhh
Confidence            6666666666667666  6777777777754

>PHA03098 kelch-like protein; Provisional

Probab=97.48  E-value=0.017  Score=51.29  Aligned_cols=187  Identities=13%  Similarity=0.120  Sum_probs=93.2

Q ss_pred             EeCCCEEEEecCCC------eEEEEEccccccccc--cccccccEEEEEECCCCCeEEEecCC-----CcEEEEEcCCCe
Q psy7482          21 AATSKLAASSGADE------TVVLYDMVKRKQSGA--LMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQ   87 (327)
Q Consensus        21 ~~~~~~l~~~~~dg------~v~~w~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~   87 (327)
                      ..++.+++.||.++      .+..||..+++....  +.........+..  +++..+.||.+     ..+..||..+.+
T Consensus       292 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~  369 (534)
T PHA03098        292 VLNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESK  369 (534)
T ss_pred             EECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence            33777788887543      477888776654221  1111111222222  56677777765     357778887654


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCC------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      ....-....... -.+++ .-+++..+.|+.+      ..+..||+.+.+.....+.+....    -.++ ...++.+++
T Consensus       370 W~~~~~lp~~r~-~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~----~~~~-~~~~~~iyv  442 (534)
T PHA03098        370 WREEPPLIFPRY-NPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHY----GGCA-IYHDGKIYV  442 (534)
T ss_pred             eeeCCCcCcCCc-cceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcccc----CceE-EEECCEEEE
Confidence            332210111111 11122 2356666777632      358889988776544333222211    1122 223566666


Q ss_pred             eec-C--------CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCC
Q psy7482         162 IPI-Q--------NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDG  216 (327)
Q Consensus       162 ~~~-~--------~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~  216 (327)
                      .|+ +        ..+.+||..+++-...  +.....-.+++...+..++.|+.+     +.+.+||..+.
T Consensus       443 ~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        443 IGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             ECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence            664 2        1378888877653322  111111122233334566666644     46777777654

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.46  E-value=0.059  Score=46.42  Aligned_cols=176  Identities=9%  Similarity=0.116  Sum_probs=100.9

Q ss_pred             ccEEEEEe-CCCEEEEec---CCCeEEEEEccccccccccccccccEEEEEECCC----CCeEEEecCCCcEEEEEcC--
Q psy7482          15 ASVRSVAA-TSKLAASSG---ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE----GSHLISCSDDGSIAIFRVG--   84 (327)
Q Consensus        15 ~~v~~~~~-~~~~l~~~~---~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~--   84 (327)
                      -+|..++| ||+.++-..   .+|.+++=|   .+.+    +.-+.|..+.|.|-    ...|++......|.+|-+.  
T Consensus        20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGd---s~vi----GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s   92 (671)
T PF15390_consen   20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGD---SKVI----GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPS   92 (671)
T ss_pred             ccccceEecCCCEEEEEeeeeeCCccccCC---ccEe----eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccC
Confidence            36788999 888765432   234333322   1222    23345899999994    3245555667799999874  


Q ss_pred             ---CCeEEEeEEecccC--Cc--eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          85 ---SWQLEKLFKKAHKG--TA--VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        85 ---~~~~~~~~~~~~~~--~~--v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                         .++..... ..+-.  -|  ...+.|+|....|+.-.....=.+++++.........+...    +.|.|.+|.+||
T Consensus        93 ~~e~~K~l~sQ-tcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~----G~IhCACWT~DG  167 (671)
T PF15390_consen   93 TTERNKLLMSQ-TCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTS----GLIHCACWTKDG  167 (671)
T ss_pred             ccccccceeee-eeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCC----ceEEEEEecCcC
Confidence               22322221 11111  11  24578999888777766554445566655444333333322    339999999999


Q ss_pred             cEEEeecCC--eEEEEEecCCce-----eeEecCCCceeEEEeecCceEEEe
Q psy7482         158 LLYAIPIQN--KAVVFSVEKAGV-----LQTLKSESKVHSVCFLNETTVCTG  202 (327)
Q Consensus       158 ~~l~~~~~~--~i~i~d~~~~~~-----~~~~~~~~~i~~~~~~~~~~l~~~  202 (327)
                      +.|+++-+.  .-++||-.....     ...|.-.+.|.++.-.-|..++++
T Consensus       168 ~RLVVAvGSsLHSyiWd~~qKtL~~CsfcPVFdv~~~Icsi~AT~dsqVAva  219 (671)
T PF15390_consen  168 QRLVVAVGSSLHSYIWDSAQKTLHRCSFCPVFDVGGYICSIEATVDSQVAVA  219 (671)
T ss_pred             CEEEEEeCCeEEEEEecCchhhhhhCCcceeecCCCceEEEEEeccceEEEE
Confidence            988777543  567888544321     123334556666665555444444

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.41  E-value=0.039  Score=43.03  Aligned_cols=212  Identities=14%  Similarity=0.191  Sum_probs=124.3

Q ss_pred             EEEEEcccccccccccccccc--EEEEEECCCCCeEEEecCC-----CcEEEEEcCCC-eEEEeEEecccCCceeeEEEe
Q psy7482          36 VVLYDMVKRKQSGALMQHEGT--ITCLKFTPEGSHLISCSDD-----GSIAIFRVGSW-QLEKLFKKAHKGTAVNHISIH  107 (327)
Q Consensus        36 v~~w~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~-~~~~~~~~~~~~~~v~~~~~~  107 (327)
                      ..++|....+...++...++.  --.=.|+|||.+|...-.|     |.|-|||.+.+ +.+..+ ..|.-. ...+.+.
T Consensus        93 ~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~-~t~GiG-pHev~lm  170 (366)
T COG3490          93 AMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEF-STHGIG-PHEVTLM  170 (366)
T ss_pred             EEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceeccc-ccCCcC-cceeEEe
Confidence            346666655544443221111  1112589999998865443     78999998743 445555 555545 6788999


Q ss_pred             cCCCEEEEEeC------------------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC--
Q psy7482         108 PSGKLALSVGK------------------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN--  166 (327)
Q Consensus       108 ~~~~~l~~~~~------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~--  166 (327)
                      +||+.++.+..                  .-++.+.|..+|+.+....++.. .+...+..++..+||..++.+- .|  
T Consensus       171 ~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~-l~~lSiRHld~g~dgtvwfgcQy~G~~  249 (366)
T COG3490         171 ADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPAS-LRQLSIRHLDIGRDGTVWFGCQYRGPR  249 (366)
T ss_pred             cCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchh-hhhcceeeeeeCCCCcEEEEEEeeCCC
Confidence            99998887643                  11355566566666555544422 2234588889999988777763 22  


Q ss_pred             ---eEEEEEecCCceeeEec--------CCCceeEEEeecC-ceEEEeC-CCCcEEEEEcCCCceeEEeeecccceEEEE
Q psy7482         167 ---KAVVFSVEKAGVLQTLK--------SESKVHSVCFLNE-TTVCTGN-EESAITAYNLTDGSHLWQIKASASRIKGLV  233 (327)
Q Consensus       167 ---~i~i~d~~~~~~~~~~~--------~~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~  233 (327)
                         --.+=-...++.+.-+.        ....|-+++.+.+ +.++..+ ..+...+||..++..+..-.-.  ....++
T Consensus       250 ~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~--daaGva  327 (366)
T COG3490         250 NDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALP--DAAGVA  327 (366)
T ss_pred             ccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccccc--ccccce
Confidence               11122223445544443        2345777888765 6665555 4556779999999876543211  122233


Q ss_pred             EEecCCCcEEEEecCCCeEEEEE
Q psy7482         234 FFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                          +...-++..+.+|.+.++.
T Consensus       328 ----~~~~gf~vssg~G~~~~~s  346 (366)
T COG3490         328 ----AAKGGFAVSSGQGRIIFYS  346 (366)
T ss_pred             ----eccCceEEecCCceEEecc
Confidence                3444455666678887774

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.40  E-value=0.00071  Score=37.22  Aligned_cols=34  Identities=21%  Similarity=0.688  Sum_probs=29.9

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      ...|.+++|+|..++||.+..+|.|.++++ +++.
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            456999999999999999999999999998 4443

>KOG4499|consensus

Probab=97.36  E-value=0.037  Score=41.83  Aligned_cols=212  Identities=14%  Similarity=0.162  Sum_probs=112.8

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccc-cccccccEEEEEECCCC---CeEEEecCCCcEEEEEcC--CCeEEEeE---E
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPEG---SHLISCSDDGSIAIFRVG--SWQLEKLF---K   93 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~-~~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~iw~~~--~~~~~~~~---~   93 (327)
                      .+.++.+-=..|.|.-||..+.+..+. +.+.  +...+.+--.+   .+.+.++..-.|.-||..  ......++   .
T Consensus        26 ~~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p--~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~  103 (310)
T KOG4499|consen   26 RQSLLYVDIEAGEVHRYDIEQNKVYRAKIEGP--PSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQ  103 (310)
T ss_pred             cceEEEEEeccCceehhhhhhhheEEEEEecC--cceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccC
Confidence            344555555566777788876543322 2221  12333332222   233333333334446632  22233332   1


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeC----------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGK----------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      ........+.-..+|+|+++ .|..          .|.++.|-.. ++.......-..      -+.++|+.+.+.+..-
T Consensus       104 ~d~kknR~NDgkvdP~Gryy-~GtMad~~~~le~~~g~Ly~~~~~-h~v~~i~~~v~I------sNgl~Wd~d~K~fY~i  175 (310)
T KOG4499|consen  104 PDRKKNRLNDGKVDPDGRYY-GGTMADFGDDLEPIGGELYSWLAG-HQVELIWNCVGI------SNGLAWDSDAKKFYYI  175 (310)
T ss_pred             chHHhcccccCccCCCCcee-eeeeccccccccccccEEEEeccC-CCceeeehhccC------CccccccccCcEEEEE
Confidence            11112226667788999883 3332          2445555432 221111111111      4578898877765554


Q ss_pred             c--CCeEEEEE--ecCCc-----eeeEecC-----CCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccc
Q psy7482         164 I--QNKAVVFS--VEKAG-----VLQTLKS-----ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASR  228 (327)
Q Consensus       164 ~--~~~i~i~d--~~~~~-----~~~~~~~-----~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  228 (327)
                      .  +-.|.-||  ..+|.     .+..++.     +-....++...+ .+.++.-..++|...|..+|+.+.+++-....
T Consensus       176 Dsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~q  255 (310)
T KOG4499|consen  176 DSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQ  255 (310)
T ss_pred             ccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCc
Confidence            3  66776677  44543     2223321     112334555555 56667778889999999999999999988999


Q ss_pred             eEEEEEEecCCCcEEEE
Q psy7482         229 IKGLVFFSIPQETTVCT  245 (327)
Q Consensus       229 v~~~~~~~s~~~~~l~~  245 (327)
                      +++++|-- ++-..+.+
T Consensus       256 itsccFgG-kn~d~~yv  271 (310)
T KOG4499|consen  256 ITSCCFGG-KNLDILYV  271 (310)
T ss_pred             eEEEEecC-CCccEEEE
Confidence            99999952 43344443

>PHA02790 Kelch-like protein; Provisional

Probab=97.33  E-value=0.044  Score=47.81  Aligned_cols=184  Identities=7%  Similarity=-0.047  Sum_probs=92.3

Q ss_pred             eCCCEEEEecCCC-----eEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecCC--CcEEEEEcCCCeEEEeE
Q psy7482          22 ATSKLAASSGADE-----TVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD--GSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        22 ~~~~~l~~~~~dg-----~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~   92 (327)
                      .++.+++.||.++     .+..||..+++...  .+.........+.  -++...+.|+.+  ..+..||..+++....-
T Consensus       270 ~~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~~n~W~~~~  347 (480)
T PHA02790        270 VGEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHGDAAWVNMP  347 (480)
T ss_pred             ECCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECCCCeEEECC
Confidence            3667777887653     47778877654322  2221111122222  256777777754  35788887655433221


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCCC---CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEE
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKDK---TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAV  169 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~  169 (327)
                       .-.... -......-+++..+.|+.++   .+..||.++.+.....+.+....   .. ++ ..-++++++.|  |.+.
T Consensus       348 -~l~~~r-~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~---~~-~~-~~~~~~IYv~G--G~~e  418 (480)
T PHA02790        348 -SLLKPR-CNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHY---KS-CA-LVFGRRLFLVG--RNAE  418 (480)
T ss_pred             -CCCCCC-cccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccc---cc-eE-EEECCEEEEEC--CceE
Confidence             111111 11112223577777777553   47788888776544333322211   11 11 23356777766  4567


Q ss_pred             EEEecCCceee--EecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCC
Q psy7482         170 VFSVEKAGVLQ--TLKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDG  216 (327)
Q Consensus       170 i~d~~~~~~~~--~~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~  216 (327)
                      +||.++++-..  .+.....-.+++...+..+++|+.+     ..+..||..+.
T Consensus       419 ~ydp~~~~W~~~~~m~~~r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~~  472 (480)
T PHA02790        419 FYCESSNTWTLIDDPIYPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRTY  472 (480)
T ss_pred             EecCCCCcEeEcCCCCCCccccEEEEECCEEEEECCcCCCcccceEEEEECCCC
Confidence            78887654332  2222222234444455677777654     23555555443

>PRK13684 Ycf48-like protein; Provisional

Probab=97.29  E-value=0.075  Score=43.90  Aligned_cols=149  Identities=11%  Similarity=0.139  Sum_probs=84.9

Q ss_pred             cCCceeeEEEecCCCEEEEEeCCCCEEEE-EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecC
Q psy7482          97 KGTAVNHISIHPSGKLALSVGKDKTLRTW-NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEK  175 (327)
Q Consensus        97 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw-d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~  175 (327)
                      ... +..+.+.|++.+++++ ..|.+..- | ..++.-......    ....+.++.+.++++.++++..|.+++-....
T Consensus       172 ~g~-~~~i~~~~~g~~v~~g-~~G~i~~s~~-~gg~tW~~~~~~----~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~  244 (334)
T PRK13684        172 AGV-VRNLRRSPDGKYVAVS-SRGNFYSTWE-PGQTAWTPHQRN----SSRRLQSMGFQPDGNLWMLARGGQIRFNDPDD  244 (334)
T ss_pred             cce-EEEEEECCCCeEEEEe-CCceEEEEcC-CCCCeEEEeeCC----CcccceeeeEcCCCCEEEEecCCEEEEccCCC
Confidence            344 8899999988666554 44654432 2 122211111111    12348899999999998888888765433444


Q ss_pred             CceeeEec-----CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEee---ecccceEEEEEEecCCCcEEEEec
Q psy7482         176 AGVLQTLK-----SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIK---ASASRIKGLVFFSIPQETTVCTGN  247 (327)
Q Consensus       176 ~~~~~~~~-----~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~s~~~~~l~~~~  247 (327)
                      +..-....     ....+.++.+.|++.+++++.+|.+.. ....++.-...+   .-....+.+.+.  .+++.++ .+
T Consensus       245 G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~--~~~~~~~-~G  320 (334)
T PRK13684        245 LESWSKPIIPEITNGYGYLDLAYRTPGEIWAGGGNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFL--DPEKGFV-LG  320 (334)
T ss_pred             CCccccccCCccccccceeeEEEcCCCCEEEEcCCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEe--CCCceEE-EC
Confidence            44333222     124578888988866667777776653 344444322222   122357777774  3444444 55


Q ss_pred             CCCeEEEEE
Q psy7482         248 EESAITAYN  256 (327)
Q Consensus       248 ~d~~i~i~d  256 (327)
                      ..|.|.-++
T Consensus       321 ~~G~il~~~  329 (334)
T PRK13684        321 QRGVLLRYV  329 (334)
T ss_pred             CCceEEEec
Confidence            668777765

>PHA03098 kelch-like protein; Provisional

Probab=97.24  E-value=0.085  Score=46.88  Aligned_cols=186  Identities=12%  Similarity=0.081  Sum_probs=92.8

Q ss_pred             CCCeEEEecCCC------cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCcee
Q psy7482          65 EGSHLISCSDDG------SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSA  133 (327)
Q Consensus        65 ~~~~l~~~~~d~------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~  133 (327)
                      ++..++.|+.++      .+..||..+.+....- ...... .......-+++..+.||.+     ..+..||..+.+..
T Consensus       294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~-~~~~~R-~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~  371 (534)
T PHA03098        294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVP-ELIYPR-KNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWR  371 (534)
T ss_pred             CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECC-CCCccc-ccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCcee
Confidence            456667776542      5778888776553221 111111 1111222357777778765     34778888776654


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeec--C-----CeEEEEEecCCceeeEe--cCCCceeEEEeecCceEEEeCC
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-----NKAVVFSVEKAGVLQTL--KSESKVHSVCFLNETTVCTGNE  204 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-----~~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~  204 (327)
                      ...+.+....   .. +++ .-++++++.|+  .     +.+..||..+++-...-  .....-.+++...+..++.|+.
T Consensus       372 ~~~~lp~~r~---~~-~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~  446 (534)
T PHA03098        372 EEPPLIFPRY---NP-CVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGI  446 (534)
T ss_pred             eCCCcCcCCc---cc-eEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCc
Confidence            4333322211   11 122 23566666664  1     45788998765432211  1111122333334456666654


Q ss_pred             C--------CcEEEEEcCCCceeE--EeeecccceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCc
Q psy7482         205 E--------SAITAYNLTDGSHLW--QIKASASRIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGS  261 (327)
Q Consensus       205 d--------~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~  261 (327)
                      +        ..+.+||..+.+-..  .+..... -.+++.   .+++.++.|+.+     +.+.+||..+.+
T Consensus       447 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~-~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~  514 (534)
T PHA03098        447 SYIDNIKVYNIVESYNPVTNKWTELSSLNFPRI-NASLCI---FNNKIYVVGGDKYEYYINEIEVYDDKTNT  514 (534)
T ss_pred             cCCCCCcccceEEEecCCCCceeeCCCCCcccc-cceEEE---ECCEEEEEcCCcCCcccceeEEEeCCCCE
Confidence            3        237888887654221  1111111 112222   367777777654     467888876653

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.24  E-value=0.027  Score=41.71  Aligned_cols=178  Identities=12%  Similarity=0.124  Sum_probs=99.7

Q ss_pred             EEEe-CCCEEEEecCC--CeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          19 SVAA-TSKLAASSGAD--ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        19 ~~~~-~~~~l~~~~~d--g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      .+.+ ++.++.+.+.-  ..|++||+.+++.+.+-.-....+..=-...-++++ .-.-.+|.-..+|.++.+.+..+..
T Consensus        50 GL~~~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y  129 (262)
T COG3823          50 GLEYLDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSY  129 (262)
T ss_pred             ceeeeCCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccccc
Confidence            4455 77777776643  469999999888765443221111111111113333 2345578888999988888877733


Q ss_pred             cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEe
Q psy7482          95 AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSV  173 (327)
Q Consensus        95 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~  173 (327)
                      ...   =+.++  .|++.|+.+....+++.-|.++-...........+..-..++.+.|- +|.++|--- ...|...|.
T Consensus       130 ~Ge---GWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p  203 (262)
T COG3823         130 EGE---GWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDP  203 (262)
T ss_pred             CCc---ceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcC
Confidence            333   23443  35555666665667777777665444333333222222234555554 565555543 566677777


Q ss_pred             cCCceeeEec-------------CCCceeEEEeecC--ceEEEe
Q psy7482         174 EKAGVLQTLK-------------SESKVHSVCFLNE--TTVCTG  202 (327)
Q Consensus       174 ~~~~~~~~~~-------------~~~~i~~~~~~~~--~~l~~~  202 (327)
                      .+|+....+.             +..-.+.+++.|+  ..+++|
T Consensus       204 ~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         204 DSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             CCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            7777766553             2235677888886  344444

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=97.17  E-value=0.029  Score=49.52  Aligned_cols=114  Identities=15%  Similarity=0.158  Sum_probs=72.8

Q ss_pred             EEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCC-----
Q psy7482          57 ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVK-----  129 (327)
Q Consensus        57 v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~-----  129 (327)
                      .+-+.-+.-++.-++-+....+.|||.+.+.....-.....+. |.+++|..  +++.+++.+..+.|.++--..     
T Consensus        32 ~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~-I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~  110 (631)
T PF12234_consen   32 PSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDP-IRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTN  110 (631)
T ss_pred             cceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCc-eeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhc
Confidence            3344444445444444455689999999887655542233444 99999975  888999999999999985421     


Q ss_pred             ----CceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEec
Q psy7482         130 ----GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVE  174 (327)
Q Consensus       130 ----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~  174 (327)
                          -..+..+......  ..+|.+..|.++|.+ ++|+++.+.++|-.
T Consensus       111 ~~p~w~~i~~i~i~~~T--~h~Igds~Wl~~G~L-vV~sGNqlfv~dk~  156 (631)
T PF12234_consen  111 KGPSWAPIRKIDISSHT--PHPIGDSIWLKDGTL-VVGSGNQLFVFDKW  156 (631)
T ss_pred             CCcccceeEEEEeecCC--CCCccceeEecCCeE-EEEeCCEEEEECCC
Confidence                1122333333332  235889999998855 45557888888743

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.15  E-value=0.0017  Score=35.69  Aligned_cols=34  Identities=18%  Similarity=0.356  Sum_probs=25.9

Q ss_pred             CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce
Q psy7482         184 SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH  218 (327)
Q Consensus       184 ~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~  218 (327)
                      ....|..++|+|. ++++.++.+|.|.+|.+ +++.
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr   44 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR   44 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence            3456888888888 88888888888888887 4544

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=97.14  E-value=0.039  Score=37.82  Aligned_cols=112  Identities=9%  Similarity=0.076  Sum_probs=74.2

Q ss_pred             EEEecCCCEEEEEeCCCCEEEEEcCCCc--------eeeeeeccccCccccceEEEEEcc-----CCcEEEeecCCeEEE
Q psy7482         104 ISIHPSGKLALSVGKDKTLRTWNLVKGR--------SAYITNLSSYGVGFENLDSVVWSP-----EGLLYAIPIQNKAVV  170 (327)
Q Consensus       104 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~i~i  170 (327)
                      -.|......|+.++.-|.|.|++.....        .+..+.+...      |++++-.+     +...|+.|+...+..
T Consensus         4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~------italaaG~l~~~~~~D~LliGt~t~lla   77 (136)
T PF14781_consen    4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQE------ITALAAGRLKPDDGRDCLLIGTQTSLLA   77 (136)
T ss_pred             EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCc------eEEEEEEecCCCCCcCEEEEeccceEEE
Confidence            3455555678888888999999876432        3334444443      66665443     346899999999999


Q ss_pred             EEecCCceeeEecCCCceeEEEeec----CceEEEeCCCCcEEEEEcCCCceeEE
Q psy7482         171 FSVEKAGVLQTLKSESKVHSVCFLN----ETTVCTGNEESAITAYNLTDGSHLWQ  221 (327)
Q Consensus       171 ~d~~~~~~~~~~~~~~~i~~~~~~~----~~~l~~~~~d~~i~i~d~~~~~~~~~  221 (327)
                      ||+.....+..-.-+..+.++.+-.    +.-++..+.+..|.-||..-.+..++
T Consensus        78 YDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt  132 (136)
T PF14781_consen   78 YDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT  132 (136)
T ss_pred             EEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence            9999887776666667787777732    13445555566777777655444444

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=97.13  E-value=0.13  Score=43.46  Aligned_cols=263  Identities=12%  Similarity=0.159  Sum_probs=142.4

Q ss_pred             CCEEEEecCCCeEEEEEccccccc--ccc--ccccccEEEEEECC-----CCCeEEEecCCCcEEEEEcCC--Ce-----
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQS--GAL--MQHEGTITCLKFTP-----EGSHLISCSDDGSIAIFRVGS--WQ-----   87 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~--~~~--~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~iw~~~~--~~-----   87 (327)
                      ...+++|+.+|.++||+.......  ..+  ..-..+|..+..-+     +...||+ -.-..+.+|.+..  +.     
T Consensus        37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g~  115 (418)
T PF14727_consen   37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHGN  115 (418)
T ss_pred             ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccCc
Confidence            358999999999999998544311  111  12346777776532     2234444 4455788887721  11     


Q ss_pred             --EEEeEEeccc-CCceeeEEEec----C-CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE
Q psy7482          88 --LEKLFKKAHK-GTAVNHISIHP----S-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL  159 (327)
Q Consensus        88 --~~~~~~~~~~-~~~v~~~~~~~----~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  159 (327)
                        .+..+ ..|. ......++.-|    . ..++++-+.||.+.+++-+.-...  ..++.. .   -.-.+.+.+....
T Consensus       116 ~~~L~~~-yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~--~~lp~~-l---lPgPl~Y~~~tDs  188 (418)
T PF14727_consen  116 QYQLELI-YEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFS--RFLPDF-L---LPGPLCYCPRTDS  188 (418)
T ss_pred             EEEEEEE-EEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEE--EEcCCC-C---CCcCeEEeecCCE
Confidence              11111 2221 11133344433    1 357888899999999996543322  222221 1   1345777777666


Q ss_pred             EEeec-CCeEEEEEecCC--------------------c---eeeEecCCCceeEEEeec---C-ceEEEeCCCCcEEEE
Q psy7482         160 YAIPI-QNKAVVFSVEKA--------------------G---VLQTLKSESKVHSVCFLN---E-TTVCTGNEESAITAY  211 (327)
Q Consensus       160 l~~~~-~~~i~i~d~~~~--------------------~---~~~~~~~~~~i~~~~~~~---~-~~l~~~~~d~~i~i~  211 (327)
                      +++++ +..+..|....-                    +   +..++.-...+..+....   . ..+++-+ ...+.+.
T Consensus       189 fvt~sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nlGE~~l~i~v~~~~~~~~~IvvLg-er~Lf~l  267 (418)
T PF14727_consen  189 FVTASSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNLGEQALDIQVVRFSSSESDIVVLG-ERSLFCL  267 (418)
T ss_pred             EEEecCceeEEEecHHHhhhccccccccccccccccccccccceeEEECCceeEEEEEEEcCCCCceEEEEe-cceEEEE
Confidence            66665 677877764210                    0   112222334444444432   2 2233322 3345555


Q ss_pred             EcCCCceeEEeeecccceEEEE-EEe----cCC-CcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-----
Q psy7482         212 NLTDGSHLWQIKASASRIKGLV-FFS----IPQ-ETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-----  280 (327)
Q Consensus       212 d~~~~~~~~~~~~~~~~v~~~~-~~~----s~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-----  280 (327)
                      +- +|......+- .....++. |..    .++ ...++.++.++.+.||.  +.++++..+....+| ++....     
T Consensus       268 ~~-~G~l~~~krL-d~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~--d~~L~WsA~l~~~PV-al~v~~~~~~~  342 (418)
T PF14727_consen  268 KD-NGSLRFQKRL-DYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYE--DTTLVWSAQLPHVPV-ALSVANFNGLK  342 (418)
T ss_pred             cC-CCeEEEEEec-CCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEe--CCeEEEecCCCCCCE-EEEecccCCCC
Confidence            54 3443333332 22222222 211    122 22588899999999995  566676666544444 444332     


Q ss_pred             cEEEEEecCCcEEEEEccCc
Q psy7482         281 NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 ~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ..|++-+.+|.+.+-=+.+.
T Consensus       343 G~IV~Ls~~G~L~v~YLGTd  362 (418)
T PF14727_consen  343 GLIVSLSDEGQLSVSYLGTD  362 (418)
T ss_pred             ceEEEEcCCCcEEEEEeCCC
Confidence            89999999999998877666

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=97.07  E-value=0.1  Score=41.30  Aligned_cols=220  Identities=15%  Similarity=0.153  Sum_probs=126.3

Q ss_pred             EEEEEECCCCCeEEEecCCCcEEEEEcC------CCe-EEEeEEec-----ccCCceeeEEEecCCC------------E
Q psy7482          57 ITCLKFTPEGSHLISCSDDGSIAIFRVG------SWQ-LEKLFKKA-----HKGTAVNHISIHPSGK------------L  112 (327)
Q Consensus        57 v~~~~~~~~~~~l~~~~~d~~i~iw~~~------~~~-~~~~~~~~-----~~~~~v~~~~~~~~~~------------~  112 (327)
                      -+.|+++|.+.+-++....+...+||..      ..+ +.-.+ ..     .... .+.+.|+....            .
T Consensus        25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vti-P~~~~~~~~~~-PTGiVfN~~~~F~vt~~g~~~~a~  102 (336)
T TIGR03118        25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVI-PAPPPLAAEGT-PTGQVFNGSDTFVVSGEGITGPSR  102 (336)
T ss_pred             cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEe-cCCCCCCCCCC-ccEEEEeCCCceEEcCCCccccee
Confidence            4789999998888887778899999986      122 22233 21     1123 67777774322            3


Q ss_pred             EEEEeCCCCEEEEEcCCCce---eeeeeccccCccccceEEEEEcc--CCcEEEeec--CCeEEEEEecCCceee--Eec
Q psy7482         113 ALSVGKDKTLRTWNLVKGRS---AYITNLSSYGVGFENLDSVVWSP--EGLLYAIPI--QNKAVVFSVEKAGVLQ--TLK  183 (327)
Q Consensus       113 l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~--~~~i~i~d~~~~~~~~--~~~  183 (327)
                      ++.+++||+|.-|...-+..   .......... ...-...+++..  .+.+|..+.  .++|.+||-.-.+...  .+.
T Consensus       103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~-~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~  181 (336)
T TIGR03118       103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQ-QGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFI  181 (336)
T ss_pred             EEEEeCCceEEeecCcCCcccccccEEEEccCC-CcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCcc
Confidence            67788999999998643322   1112121110 011134455543  356666664  8999999854332211  011


Q ss_pred             -----CCCc------------eeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEEe----cCC
Q psy7482         184 -----SESK------------VHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFFS----IPQ  239 (327)
Q Consensus       184 -----~~~~------------i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~----s~~  239 (327)
                           ....            |+-..-.++ ..=+.|..-|.|.+||+ +++.++++.  +.-..-..|+..|    ...
T Consensus       182 DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa~FG~~s  260 (336)
T TIGR03118       182 DPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPESFGSLS  260 (336)
T ss_pred             CCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeeeChhhhCCCC
Confidence                 0000            111111122 12233455678999997 477777763  2233445666532    245


Q ss_pred             CcEEEEecCCCeEEEEEcCCCceeEEeecccC------ceEEEeeeC
Q psy7482         240 ETTVCTGNEESAITAYNLTDGSHLWHIKASAS------RIKGLASHR  280 (327)
Q Consensus       240 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~  280 (327)
                      +.+|+----||+|..||..+++.+..+....+      .++.|.|..
T Consensus       261 g~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn  307 (336)
T TIGR03118       261 GALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN  307 (336)
T ss_pred             CCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence            67777766799999999999998877775442      456677754

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PRK10115 protease 2; Provisional

Probab=97.05  E-value=0.25  Score=45.25  Aligned_cols=269  Identities=7%  Similarity=0.037  Sum_probs=131.2

Q ss_pred             EEEEEe--CCCEEEEec-----CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC------CcEEEEEc
Q psy7482          17 VRSVAA--TSKLAASSG-----ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD------GSIAIFRV   83 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~-----~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~   83 (327)
                      +..+.+  ++++|+-+.     ....+++-|+.+++.+........  ..++|.+|++.|+....+      ..|+.+++
T Consensus       129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~l  206 (686)
T PRK10115        129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTI  206 (686)
T ss_pred             EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEEC
Confidence            444455  888877543     223588999988864322221221  458999998877655432      36788888


Q ss_pred             CCC--eEEEeEEecccCCcee-eEEEecCCCEEEEEeC---CCCEEEEEcC--CCceeeeeeccccCccccceEEEEEcc
Q psy7482          84 GSW--QLEKLFKKAHKGTAVN-HISIHPSGKLALSVGK---DKTLRTWNLV--KGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        84 ~~~--~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~---dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      .++  +....+ ...... .. ....+.++++++..+.   ++.+.+++..  .+...........     ....+. +.
T Consensus       207 gt~~~~d~lv~-~e~~~~-~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~  278 (686)
T PRK10115        207 GTPASQDELVY-EEKDDT-FYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKD-----HEYSLD-HY  278 (686)
T ss_pred             CCChhHCeEEE-eeCCCC-EEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCC-----CEEEEE-eC
Confidence            877  333344 222222 33 2333447777665443   4578888853  3332222222211     012222 22


Q ss_pred             CCcEEEeec----CCeEEEEEecC-CceeeEecC--CCceeEEEeecCceEEEeCCCCcEEEEEcCC-CceeEEee-ecc
Q psy7482         156 EGLLYAIPI----QNKAVVFSVEK-AGVLQTLKS--ESKVHSVCFLNETTVCTGNEESAITAYNLTD-GSHLWQIK-ASA  226 (327)
Q Consensus       156 ~~~~l~~~~----~~~i~i~d~~~-~~~~~~~~~--~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~-~~~  226 (327)
                      .+.+++...    ...|...++.. ++....+.+  ...+..+.+..+.++++...++.-+++-+.. +..+..+. ...
T Consensus       279 ~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~  358 (686)
T PRK10115        279 QHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDP  358 (686)
T ss_pred             CCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCCCCceEEecCCCC
Confidence            344444433    22444445542 222233333  2468888888667777777777766554432 22333333 112


Q ss_pred             cceEEEEEEecCCC-cEEEEec---CCCeEEEEEcCCCceeEEeeccc-CceEEEeeeCcEEEEEecCCc-EEEEE
Q psy7482         227 SRIKGLVFFSIPQE-TTVCTGN---EESAITAYNLTDGSHLWHIKASA-SRIKGLASHRNHLICITSAGD-LVVWE  296 (327)
Q Consensus       227 ~~v~~~~~~~s~~~-~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~dg~-v~iw~  296 (327)
                      ..+..+.....+++ ..+++.+   .-+.+..+|..+++. ..+.... .....-.+.+..+-.-+.||. |-+|=
T Consensus       359 ~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~-~~l~~~~~~~~~~~~~~~e~v~~~s~DG~~Ip~~l  433 (686)
T PRK10115        359 AYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGER-RVLKQTEVPGFDAANYRSEHLWITARDGVEVPVSL  433 (686)
T ss_pred             ceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcE-EEEEecCCCCcCccccEEEEEEEECCCCCEEEEEE
Confidence            22222223211333 3443332   246788899877652 2222111 111111233344444566765 55543

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.04  E-value=0.059  Score=40.01  Aligned_cols=171  Identities=13%  Similarity=0.129  Sum_probs=104.1

Q ss_pred             CCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecCCC
Q psy7482         109 SGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSES  186 (327)
Q Consensus       109 ~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~  186 (327)
                      ++.++.+.+.  ...|+.||+.+++.....++.....-...++.   ..+.-+..+=.+|.-..||.++.+.+..+..++
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~---~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~G  131 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITK---LGDYFYQLTWKEGVAFKYDADTLEELGRFSYEG  131 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceee---ccceEEEEEeccceeEEEChHHhhhhcccccCC
Confidence            4566666664  34699999999988776666531100001111   112222333348888999999999988888777


Q ss_pred             ceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee--cc---cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         187 KVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA--SA---SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       187 ~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~---~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      .-..++....+ ++.+....+++.-|.++.....++..  ..   ..++.+.|   -+|...|-.-.+..|...|..+|+
T Consensus       132 eGWgLt~d~~~-LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~---VdG~lyANVw~t~~I~rI~p~sGr  207 (262)
T COG3823         132 EGWGLTSDDKN-LIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEW---VDGELYANVWQTTRIARIDPDSGR  207 (262)
T ss_pred             cceeeecCCcc-eEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceee---eccEEEEeeeeecceEEEcCCCCc
Confidence            66666654434 55555566777777766554444321  11   23445566   577777766666667777777777


Q ss_pred             eeEEee------------cccCceEEEeeeC---cEEEEE
Q psy7482         262 HLWHIK------------ASASRIKGLASHR---NHLICI  286 (327)
Q Consensus       262 ~~~~~~------------~~~~~v~~~~~~~---~~l~~~  286 (327)
                      .+..+.            .+.+..+.+++.|   +++++|
T Consensus       208 V~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG  247 (262)
T COG3823         208 VVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG  247 (262)
T ss_pred             EEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence            655443            2344677888888   566665

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=96.95  E-value=0.19  Score=42.33  Aligned_cols=198  Identities=10%  Similarity=0.056  Sum_probs=115.0

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccc--cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCc
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQH--EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA  100 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~  100 (327)
                      .+..+..+..+|.|.-.|..+++.+.....-  ...+..-.+..+|+ ++.++.++.+..+|..+|+........ ....
T Consensus        67 ~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~-~~~~  144 (370)
T COG1520          67 GDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVG-GSPY  144 (370)
T ss_pred             eCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecC-CCeE
Confidence            3344445577888888898888865433321  12222222333565 777888998999999889888776322 2110


Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCce
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGV  178 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~  178 (327)
                      +..-....++ .++.++.+|.+...|..+++.......... .... +..-....++..++...  ++.+.-+|.+++..
T Consensus       145 ~~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~-~~~~-~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~  221 (370)
T COG1520         145 YASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAP-LSLS-IYGSPAIASGTVYVGSDGYDGILYALNAEDGTL  221 (370)
T ss_pred             EecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCc-cccc-cccCceeecceEEEecCCCcceEEEEEccCCcE
Confidence            2222222233 344444789999999998988777655431 0000 11111133444444444  45677888888887


Q ss_pred             eeEecCCCceeE-----E-Eee-----cCceEEEeCCCCcEEEEEcCCCceeEEeeec
Q psy7482         179 LQTLKSESKVHS-----V-CFL-----NETTVCTGNEESAITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       179 ~~~~~~~~~i~~-----~-~~~-----~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  225 (327)
                      ....+....+..     . .+.     -++.+..++.++.+...|..+++.+.++...
T Consensus       222 ~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~  279 (370)
T COG1520         222 KWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPAG  279 (370)
T ss_pred             eeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence            777541111110     1 111     1233456677888999999999999888764

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.90  E-value=0.22  Score=43.10  Aligned_cols=152  Identities=14%  Similarity=0.213  Sum_probs=85.7

Q ss_pred             cccEEEEEECCCCCeEE-Eec--CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC----CCEEEEEeCCCCEEEEE
Q psy7482          54 EGTITCLKFTPEGSHLI-SCS--DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS----GKLALSVGKDKTLRTWN  126 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~-~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~iwd  126 (327)
                      -.++..++|. ||+.++ +.-  .+|.+++=|   .+.+     +.... |..+.|.|-    ...+++.-....|.+|.
T Consensus        19 iHPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd---s~vi-----GqFEh-V~GlsW~P~~~~~~paLLAVQHkkhVtVWq   88 (671)
T PF15390_consen   19 IHPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD---SKVI-----GQFEH-VHGLSWAPPCTADTPALLAVQHKKHVTVWQ   88 (671)
T ss_pred             hccccceEec-CCCEEEEEeeeeeCCccccCC---ccEe-----eccce-eeeeeecCcccCCCCceEEEeccceEEEEE
Confidence            3568889997 565544 321  233333211   1222     33344 889999984    22455555668899999


Q ss_pred             cCC-----CceeeeeeccccCccccceEEEEEccCCcEEEeecCCeE-EEEEecC--CceeeEecCCCceeEEEeecC-c
Q psy7482         127 LVK-----GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKA-VVFSVEK--AGVLQTLKSESKVHSVCFLNE-T  197 (327)
Q Consensus       127 ~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i-~i~d~~~--~~~~~~~~~~~~i~~~~~~~~-~  197 (327)
                      +..     ++........-...-.--...+.|+|....|++-....+ .+++++.  ......++..+.|.|.+|.+| .
T Consensus        89 L~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~  168 (671)
T PF15390_consen   89 LCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQ  168 (671)
T ss_pred             eccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCcCC
Confidence            852     222111111100000001346789999988887763333 3455543  344455668899999999998 4


Q ss_pred             eEE-EeCCCCcEEEEEcCC
Q psy7482         198 TVC-TGNEESAITAYNLTD  215 (327)
Q Consensus       198 ~l~-~~~~d~~i~i~d~~~  215 (327)
                      +|+ +.+..=.-++||-..
T Consensus       169 RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  169 RLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             EEEEEeCCeEEEEEecCch
Confidence            444 444455678898544

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.80  E-value=0.18  Score=39.72  Aligned_cols=268  Identities=10%  Similarity=0.085  Sum_probs=145.0

Q ss_pred             ccEEEEEeCCCEEEEecCCCeEEEEEcccccccccccc--ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe---EE
Q psy7482          15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ--HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ---LE   89 (327)
Q Consensus        15 ~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~   89 (327)
                      +-+..+.+.+++...+..+.-++|.|+.+......+..  -.+--.++..+  |++..++..|.-+.+.|+.+.+   +.
T Consensus        87 ~l~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vs--Gn~aYVadlddgfLivdvsdpssP~la  164 (370)
T COG5276          87 DLFADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVS--GNYAYVADLDDGFLIVDVSDPSSPQLA  164 (370)
T ss_pred             hhhheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEec--CCEEEEeeccCcEEEEECCCCCCceee
Confidence            33445556788888888888899999987654332221  11333444444  8888888866678888986543   33


Q ss_pred             EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEE
Q psy7482          90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAV  169 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~  169 (327)
                      ..+ ...... -..++.+  |++-..+..|+-+.+-|+...............   ..+.++..+++.-+++.. +..+.
T Consensus       165 gry-a~~~~d-~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g---~g~~sv~vsdnr~y~vvy-~egvl  236 (370)
T COG5276         165 GRY-ALPGGD-THDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTG---PGTYSVSVSDNRAYLVVY-DEGVL  236 (370)
T ss_pred             eee-ccCCCC-ceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEEecC---CceEEEEecCCeeEEEEc-ccceE
Confidence            333 222222 3566665  778888889999999999875543332221111   127777777665555554 44566


Q ss_pred             EEEecCCceeeEec--CCCceeEE---EeecCceEEEeCCCCcEEEEEcCCCce---eEEeeecccceEEEEEEecCCCc
Q psy7482         170 VFSVEKAGVLQTLK--SESKVHSV---CFLNETTVCTGNEESAITAYNLTDGSH---LWQIKASASRIKGLVFFSIPQET  241 (327)
Q Consensus       170 i~d~~~~~~~~~~~--~~~~i~~~---~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~s~~~~  241 (327)
                      +-|..+.+....+.  ....+.++   .. ++++......+.-+.+-|+.+..-   ...+......-..+..    -+.
T Consensus       237 ivd~s~~ssp~~~gsyet~~p~~~s~v~V-s~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g~~a~gi~a----y~~  311 (370)
T COG5276         237 IVDVSGPSSPTVFGSYETSNPVSISTVPV-SGEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIRA----YGN  311 (370)
T ss_pred             EEecCCCCCceEeeccccCCcccccceec-ccceeeeeccccCceeEeccCCCCCchhccccCCCccccceEE----ecC
Confidence            67777666555544  22223232   33 235555555666666666654321   1111111112223332    234


Q ss_pred             EEEEecCCCeEEEEEcCCCceeEEeecccCceEE--EeeeCcEEEEEecCCcEEEEEcc
Q psy7482         242 TVCTGNEESAITAYNLTDGSHLWHIKASASRIKG--LASHRNHLICITSAGDLVVWELN  298 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~dg~v~iw~~~  298 (327)
                      ++..+..+ ...+-+....+......+....+.+  +...-+.+.+...++-+.+|+..
T Consensus       312 y~yiadkn-~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~~  369 (370)
T COG5276         312 YNYIADKN-TGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEYL  369 (370)
T ss_pred             eeEeccCC-ceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEEec
Confidence            44444333 3444444443322222222212222  22222777788888889898863

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=96.77  E-value=0.092  Score=36.08  Aligned_cols=113  Identities=11%  Similarity=0.100  Sum_probs=73.9

Q ss_pred             EEEECCCCCeEEEecCCCcEEEEEcCCC--------eEEEeEEecccCCceeeEEEec-----CCCEEEEEeCCCCEEEE
Q psy7482          59 CLKFTPEGSHLISCSDDGSIAIFRVGSW--------QLEKLFKKAHKGTAVNHISIHP-----SGKLALSVGKDKTLRTW  125 (327)
Q Consensus        59 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~--------~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~iw  125 (327)
                      .-+|......|+.++.-|+|.|++....        ..+..+  .-... |++++--+     +...|+.|+. ..+..|
T Consensus         3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L--Nin~~-italaaG~l~~~~~~D~LliGt~-t~llaY   78 (136)
T PF14781_consen    3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL--NINQE-ITALAAGRLKPDDGRDCLLIGTQ-TSLLAY   78 (136)
T ss_pred             EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEE--ECCCc-eEEEEEEecCCCCCcCEEEEecc-ceEEEE
Confidence            3456666678888999999999987532        233333  12222 77775443     2456676665 679999


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEcc----CCcEEEeecCCeEEEEEecCCceeeE
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSP----EGLLYAIPIQNKAVVFSVEKAGVLQT  181 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~~~i~i~d~~~~~~~~~  181 (327)
                      |+.+...+.....+..      ++++.+-.    +..++++|++..|.-||.+..+...+
T Consensus        79 DV~~N~d~Fyke~~DG------vn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt  132 (136)
T PF14781_consen   79 DVENNSDLFYKEVPDG------VNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT  132 (136)
T ss_pred             EcccCchhhhhhCccc------eeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence            9988776555544443      77776643    45677888888888888776665544

>PRK13684 Ycf48-like protein; Provisional

Probab=96.77  E-value=0.24  Score=40.92  Aligned_cols=147  Identities=10%  Similarity=0.035  Sum_probs=84.4

Q ss_pred             ceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec--CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee
Q psy7482         147 NLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       147 ~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  224 (327)
                      .+..+.+.|++.+++++..|.+..-....++.-....  ....++++.+.+++.++..+..|.+++=....+..-.....
T Consensus       174 ~~~~i~~~~~g~~v~~g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~~~  253 (334)
T PRK13684        174 VVRNLRRSPDGKYVAVSSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKPII  253 (334)
T ss_pred             eEEEEEECCCCeEEEEeCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccccC
Confidence            4889999999988888888866543112223233333  45678899999885555555667665322333332221111


Q ss_pred             ----cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee---cccCceEEEeeeC-cEEEEEecCCcEEEEE
Q psy7482         225 ----SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK---ASASRIKGLASHR-NHLICITSAGDLVVWE  296 (327)
Q Consensus       225 ----~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~  296 (327)
                          ....+..+.+.  +++..++++ .+|.+.. ....++.-....   .-....+.+.|.. +..+..+..|.|.-|+
T Consensus       254 ~~~~~~~~l~~v~~~--~~~~~~~~G-~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~il~~~  329 (334)
T PRK13684        254 PEITNGYGYLDLAYR--TPGEIWAGG-GNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLGQRGVLLRYV  329 (334)
T ss_pred             CccccccceeeEEEc--CCCCEEEEc-CCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEECCCceEEEec
Confidence                12346777874  666655544 5665553 334444322222   1223567777665 6666677788887765


Q ss_pred             c
Q psy7482         297 L  297 (327)
Q Consensus       297 ~  297 (327)
                      -
T Consensus       330 ~  330 (334)
T PRK13684        330 G  330 (334)
T ss_pred             C
Confidence            4

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=96.72  E-value=0.22  Score=42.93  Aligned_cols=269  Identities=13%  Similarity=0.108  Sum_probs=138.7

Q ss_pred             CccEEEEEe-CCCEEEEecCCCeEEEEEcccccccccccccc-ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        14 ~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      ..+|.++.+ -...+..|+.|| +..||..+++.++.-.... .+|..+...-.+ .|.+|+.+| +++.+.+..+...-
T Consensus       164 d~~V~aLv~D~~g~lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg-~LWVGTdqG-v~~~e~~G~~~sn~  240 (671)
T COG3292         164 DTPVVALVFDANGRLWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQG-RLWVGTDQG-VYLQEAEGWRASNW  240 (671)
T ss_pred             CccceeeeeeccCcEEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcC-cEEEEeccc-eEEEchhhcccccc
Confidence            356777777 344666788787 6777877777665444333 566666655555 467777776 77777665333222


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEE
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVF  171 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~  171 (327)
                      ...-..+. |..+.-..+| .+-.|+..|..+. ......  ..+...........+.++....+|++.+...++.+++-
T Consensus       241 ~~~lp~~~-I~ll~qD~qG-~lWiGTenGl~r~-~l~rq~--Lq~~~~~~~l~~S~vnsL~~D~dGsLWv~t~~giv~~~  315 (671)
T COG3292         241 GPMLPSGN-ILLLVQDAQG-ELWIGTENGLWRT-RLPRQG--LQIPLSKMHLGVSTVNSLWLDTDGSLWVGTYGGIVRYL  315 (671)
T ss_pred             CCCCcchh-eeeeecccCC-CEEEeecccceeE-ecCCCC--ccccccccCCccccccceeeccCCCEeeeccCceEEEe
Confidence            21112222 5544433344 4555666663332 222221  12222222223344777777878877766666666554


Q ss_pred             EecCCceeeEec-C-CCceeEEEeec---CceEEEeCCCCcEEEEEcCCCceeEEe-eecccceEEEEEEecCCCcEEEE
Q psy7482         172 SVEKAGVLQTLK-S-ESKVHSVCFLN---ETTVCTGNEESAITAYNLTDGSHLWQI-KASASRIKGLVFFSIPQETTVCT  245 (327)
Q Consensus       172 d~~~~~~~~~~~-~-~~~i~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~~  245 (327)
                      +.. -.....+. . ...+...+..|   +..+.....-|.+.+-+-.++..+... +.-...|+.+++   ..+..+..
T Consensus       316 ~a~-w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~nit~~~~---d~~g~lWl  391 (671)
T COG3292         316 TAD-WKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMNITTTLE---DSRGRLWL  391 (671)
T ss_pred             cch-hhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccccchhhh---ccCCcEEE
Confidence            332 22222222 1 11122222222   122223333334444555555554442 222244566665   23556666


Q ss_pred             ecCCCeEEEEEcCC-CceeEEeec-ccCceEEEeeeC-cEEEEEecCCcEEE
Q psy7482         246 GNEESAITAYNLTD-GSHLWHIKA-SASRIKGLASHR-NHLICITSAGDLVV  294 (327)
Q Consensus       246 ~~~d~~i~i~d~~~-~~~~~~~~~-~~~~v~~~~~~~-~~l~~~~~dg~v~i  294 (327)
                      |+...-+..|+.++ +..+....+ ..++|..+.-.| +.|..|+.+|.++.
T Consensus       392 gs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dnsLWIGTs~Glvk~  443 (671)
T COG3292         392 GSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNSLWIGTSGGLVKR  443 (671)
T ss_pred             EecccchhhhccCCcccccccccCCcccceeeeeecCCCCEEEeccCCeEec
Confidence            76665566677666 333333322 235677777777 66888988887654

>PHA02790 Kelch-like protein; Provisional

Probab=96.72  E-value=0.36  Score=42.23  Aligned_cols=182  Identities=9%  Similarity=-0.034  Sum_probs=89.3

Q ss_pred             CCCeEEEecCCC-----cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC--CCEEEEEcCCCceeeeee
Q psy7482          65 EGSHLISCSDDG-----SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD--KTLRTWNLVKGRSAYITN  137 (327)
Q Consensus        65 ~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~  137 (327)
                      ++..+++|+.++     .+..||..+++....- .-.... .......-++...+.|+.+  ..+..||..+++.....+
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~-~m~~~r-~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~  348 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIP-PMNSPR-LYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPS  348 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECC-CCCchh-hcceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence            355667777543     4677888775543321 111111 1111122367677777753  357888877665544333


Q ss_pred             ccccCccccceEEEEEccCCcEEEeec-C---CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCCCcEEEE
Q psy7482         138 LSSYGVGFENLDSVVWSPEGLLYAIPI-Q---NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEESAITAY  211 (327)
Q Consensus       138 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~  211 (327)
                      ++...   .....  ..-+|++.+.|+ +   ..+..||.++.+-...  +.....-.+++...+...+.|+   .+.+|
T Consensus       349 l~~~r---~~~~~--~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~GG---~~e~y  420 (480)
T PHA02790        349 LLKPR---CNPAV--ASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVGR---NAEFY  420 (480)
T ss_pred             CCCCC---cccEE--EEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEECC---ceEEe
Confidence            33221   11112  223577777765 3   3567888776543221  1111111233333334555553   46788


Q ss_pred             EcCCCcee--EEeeecccceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCC
Q psy7482         212 NLTDGSHL--WQIKASASRIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDG  260 (327)
Q Consensus       212 d~~~~~~~--~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~  260 (327)
                      |.++.+-.  ..+..... -.+++.   -+++..+.|+.+     ..+..||..++
T Consensus       421 dp~~~~W~~~~~m~~~r~-~~~~~v---~~~~IYviGG~~~~~~~~~ve~Yd~~~~  472 (480)
T PHA02790        421 CESSNTWTLIDDPIYPRD-NPELII---VDNKLLLIGGFYRGSYIDTIEVYNNRTY  472 (480)
T ss_pred             cCCCCcEeEcCCCCCCcc-ccEEEE---ECCEEEEECCcCCCcccceEEEEECCCC
Confidence            88665322  22211111 123333   477888888764     34666666544

>KOG1897|consensus

Probab=96.66  E-value=0.53  Score=43.41  Aligned_cols=276  Identities=13%  Similarity=0.119  Sum_probs=147.1

Q ss_pred             CccEEEEEe-----CCC---EEEEecCCCeEEEEE-ccccccccc--cc--cccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482          14 TASVRSVAA-----TSK---LAASSGADETVVLYD-MVKRKQSGA--LM--QHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus        14 ~~~v~~~~~-----~~~---~l~~~~~dg~v~~w~-~~~~~~~~~--~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      ...|.|+.+     +.+   +++.|..+..+.+-- ..+...+..  +.  .-...|....|-.|..+|.++..||.+.-
T Consensus       530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~  609 (1096)
T KOG1897|consen  530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLY  609 (1096)
T ss_pred             cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEE
Confidence            456788866     223   788888777655543 233322211  11  12345666667667889999999999877


Q ss_pred             EEc--CCCeEEEeEEeccc-CCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEE-EEEccC
Q psy7482          81 FRV--GSWQLEKLFKKAHK-GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDS-VVWSPE  156 (327)
Q Consensus        81 w~~--~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~  156 (327)
                      +.+  .+++....- +.+- -.|+.--.|+..++.-+.+..|.-..+|.-+ ++.... ++.-..     +.. ..|+.+
T Consensus       610 fv~d~~tg~lsd~K-k~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n-~kLv~s-pls~ke-----v~~~c~f~s~  681 (1096)
T KOG1897|consen  610 FVLDINTGQLSDRK-KVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSN-GKLVYS-PLSLKE-----VNHMCPFNSD  681 (1096)
T ss_pred             EEEEcccceEcccc-ccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecC-CcEEEe-ccchHH-----hhhhcccccc
Confidence            755  444433222 1111 1235545666655444445556777777643 333221 111110     111 223322


Q ss_pred             --CcEEEeecCCeEEEEEecCCc--eeeEecCCCceeEEEeecC-ceEEEeCC-----------CC---cEEEEEcCCCc
Q psy7482         157 --GLLYAIPIQNKAVVFSVEKAG--VLQTLKSESKVHSVCFLNE-TTVCTGNE-----------ES---AITAYNLTDGS  217 (327)
Q Consensus       157 --~~~l~~~~~~~i~i~d~~~~~--~~~~~~~~~~i~~~~~~~~-~~l~~~~~-----------d~---~i~i~d~~~~~  217 (327)
                        ...++.+..+.+.+.-+..-+  .++++........+++.+. ..+.+.+.           ..   .++++|-++.+
T Consensus       682 a~~d~l~~~~~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~  761 (1096)
T KOG1897|consen  682 AYPDSLASANGGALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFE  761 (1096)
T ss_pred             cCCceEEEecCCceEEEEecchhhcceeeecCCCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCcee
Confidence              246677777777777665433  2334555666777777764 23333221           11   36667766655


Q ss_pred             eeEEee--ecc--cceEEEEEEecCCCcEEEEec----------CCCeEEEEEcCCCceeEEeecc--cCceEEEee-eC
Q psy7482         218 HLWQIK--ASA--SRIKGLVFFSIPQETTVCTGN----------EESAITAYNLTDGSHLWHIKAS--ASRIKGLAS-HR  280 (327)
Q Consensus       218 ~~~~~~--~~~--~~v~~~~~~~s~~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~-~~  280 (327)
                      .+...+  ..+  ..+.++.|...| +.++++|.          ..|.|.+|...+++.+.....+  .+.+.++.- ..
T Consensus       762 vl~~hef~~~E~~~Si~s~~~~~d~-~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~fng  840 (1096)
T KOG1897|consen  762 VLSSHEFERNETALSIISCKFTDDP-NTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEFNG  840 (1096)
T ss_pred             EEeeccccccceeeeeeeeeecCCC-ceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhhCC
Confidence            443322  111  134445575322 67777664          3478888888775544444333  345555543 33


Q ss_pred             cEEEEEecCCcEEEEEccCc
Q psy7482         281 NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 ~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +++|.  -...|++|+...+
T Consensus       841 kllA~--In~~vrLye~t~~  858 (1096)
T KOG1897|consen  841 KLLAG--INQSVRLYEWTTE  858 (1096)
T ss_pred             eEEEe--cCcEEEEEEcccc
Confidence            55543  4567999998877

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.54  E-value=0.39  Score=40.40  Aligned_cols=141  Identities=11%  Similarity=0.148  Sum_probs=74.3

Q ss_pred             cEEEEEECCCCCeEEEec-----------CCC-cEEEEEcCC--CeE--EEeEEecccCCceeeEEEecCCCEEEEEeCC
Q psy7482          56 TITCLKFTPEGSHLISCS-----------DDG-SIAIFRVGS--WQL--EKLFKKAHKGTAVNHISIHPSGKLALSVGKD  119 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~-----------~d~-~i~iw~~~~--~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  119 (327)
                      ....|+|.++|+++++-.           ..+ .|.+++-.+  ++.  ...+ ...... ...+++.+++ +++ +...
T Consensus        15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vf-a~~l~~-p~Gi~~~~~G-lyV-~~~~   90 (367)
T TIGR02604        15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVF-AEELSM-VTGLAVAVGG-VYV-ATPP   90 (367)
T ss_pred             CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEe-ecCCCC-ccceeEecCC-EEE-eCCC
Confidence            456789999998776642           223 677776532  332  2333 222333 6889999888 444 4443


Q ss_pred             CCEEEE-EcCCC-----ceeeeee-cccc-CccccceEEEEEccCCcEEEeecC--------------------CeEEEE
Q psy7482         120 KTLRTW-NLVKG-----RSAYITN-LSSY-GVGFENLDSVVWSPEGLLYAIPIQ--------------------NKAVVF  171 (327)
Q Consensus       120 g~i~iw-d~~~~-----~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~l~~~~~--------------------~~i~i~  171 (327)
                       .|..+ |....     +...... +... ..+......+.|.|||.++++-.+                    +.+.-+
T Consensus        91 -~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~  169 (367)
T TIGR02604        91 -DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRY  169 (367)
T ss_pred             -eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEE
Confidence             45444 44221     1111111 2111 001233778999999987664331                    345555


Q ss_pred             EecCCceeeEec-CCCceeEEEeecCceEEEe
Q psy7482         172 SVEKAGVLQTLK-SESKVHSVCFLNETTVCTG  202 (327)
Q Consensus       172 d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~  202 (327)
                      +...++. ..+. .-.....++|+|++.+++.
T Consensus       170 ~pdg~~~-e~~a~G~rnp~Gl~~d~~G~l~~t  200 (367)
T TIGR02604       170 NPDGGKL-RVVAHGFQNPYGHSVDSWGDVFFC  200 (367)
T ss_pred             ecCCCeE-EEEecCcCCCccceECCCCCEEEE
Confidence            5544432 2333 3344668899888544443

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.49  E-value=0.31  Score=38.53  Aligned_cols=138  Identities=15%  Similarity=0.154  Sum_probs=81.7

Q ss_pred             cEEEEEECCCCCeEEEec---CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE-cCCCc
Q psy7482          56 TITCLKFTPEGSHLISCS---DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN-LVKGR  131 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~---~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd-~~~~~  131 (327)
                      .+.+.+++++++.++...   ....+.++.  .+........+.  . +..-.|++++...+....+...+++. ..++.
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~--~~~~~~~~~~g~--~-l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~   99 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGP--AGGPVRPVLTGG--S-LTRPSWDPDGWVWTVDDGSGGVRVVRDSASGT   99 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEc--CCCcceeeccCC--c-cccccccCCCCEEEEEcCCCceEEEEecCCCc
Confidence            688999999999877655   233445544  333333331222  3 78889999987766666666666663 23333


Q ss_pred             eee-eeeccccCccccceEEEEEccCCcEEEeec----CCeEEEEEec---CCce------eeEec-CCCceeEEEeecC
Q psy7482         132 SAY-ITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVE---KAGV------LQTLK-SESKVHSVCFLNE  196 (327)
Q Consensus       132 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~---~~~~------~~~~~-~~~~i~~~~~~~~  196 (327)
                      ... ........   ..|..+.++|||..++.-.    ++.+.+--+.   .+..      ..... ....+..+.|.++
T Consensus       100 ~~~~~v~~~~~~---~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~  176 (253)
T PF10647_consen  100 GEPVEVDWPGLR---GRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDD  176 (253)
T ss_pred             ceeEEecccccC---CceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCC
Confidence            221 11122111   1599999999998877654    6777766543   2201      11111 2467899999998


Q ss_pred             ceEEE
Q psy7482         197 TTVCT  201 (327)
Q Consensus       197 ~~l~~  201 (327)
                      ..|++
T Consensus       177 ~~L~V  181 (253)
T PF10647_consen  177 STLVV  181 (253)
T ss_pred             CEEEE
Confidence            44433

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=96.44  E-value=0.41  Score=43.11  Aligned_cols=146  Identities=14%  Similarity=0.190  Sum_probs=85.6

Q ss_pred             CCEEEEecCCCeEEEEEccccccc------cccc----------------cccccEEEEEECC--CCCeEEEecCCCcEE
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQS------GALM----------------QHEGTITCLKFTP--EGSHLISCSDDGSIA   79 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~------~~~~----------------~~~~~v~~~~~~~--~~~~l~~~~~d~~i~   79 (327)
                      .++++.|. .+.|.||++......      ..+.                .....|+.|....  +.+.|+.+.+||.|.
T Consensus        49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~  127 (717)
T PF08728_consen   49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL  127 (717)
T ss_pred             CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence            55666655 778999987542211      0100                0122355555443  456889999999999


Q ss_pred             EEEcCC-------C----eE-------EEeEEecccCCceeeEEEe--cCCCEEEEEeCCCCEEEEEcCCCceeeeeecc
Q psy7482          80 IFRVGS-------W----QL-------EKLFKKAHKGTAVNHISIH--PSGKLALSVGKDKTLRTWNLVKGRSAYITNLS  139 (327)
Q Consensus        80 iw~~~~-------~----~~-------~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  139 (327)
                      +|.+++       .    +.       ...+......+ +++++++  ...++||+++....|.+|-.......... ..
T Consensus       128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~S-aWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~-~~  205 (717)
T PF08728_consen  128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGAS-AWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYH-VP  205 (717)
T ss_pred             EEEHHHHHHHHHhhccccccccccccCCCCeEeecCCc-eeEEEEEecCcceEEEEecCCceEEEEEEecccccccc-cc
Confidence            997621       1    00       01121122233 8999999  77888888888888888866542111111 00


Q ss_pred             ccCccccceEEEEEccCC-----c-EEEeec-CCeEEEEEe
Q psy7482         140 SYGVGFENLDSVVWSPEG-----L-LYAIPI-QNKAVVFSV  173 (327)
Q Consensus       140 ~~~~~~~~v~~~~~~~~~-----~-~l~~~~-~~~i~i~d~  173 (327)
                      . ..+...|.+++|-++.     . .+++++ .|.+.+|++
T Consensus       206 s-~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  206 S-HQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             c-cccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            1 1122348899997743     2 555556 899888887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=96.42  E-value=0.13  Score=43.73  Aligned_cols=140  Identities=10%  Similarity=0.098  Sum_probs=90.1

Q ss_pred             CCCEEE-EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC--------cEEEeecCCeEEEEEecCCc-e
Q psy7482         109 SGKLAL-SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG--------LLYAIPIQNKAVVFSVEKAG-V  178 (327)
Q Consensus       109 ~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~l~~~~~~~i~i~d~~~~~-~  178 (327)
                      +..+|+ .++....++-.|++.|+.+........      + -+.|.|..        +.|+.-++..|.-.|.+-.. .
T Consensus       478 dssli~~dg~~~~kLykmDIErGkvveeW~~~dd------v-vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNK  550 (776)
T COG5167         478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDD------V-VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNK  550 (776)
T ss_pred             CcceEEecCCCcccceeeecccceeeeEeecCCc------c-eeecCCchhHHhcCccceEEeecccceEEecccccCCc
Confidence            444444 344556788888888888777766654      4 56777743        34555567777777765432 2


Q ss_pred             eeEec-----CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEE
Q psy7482         179 LQTLK-----SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAIT  253 (327)
Q Consensus       179 ~~~~~-----~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~  253 (327)
                      +....     ......+..-..++++++++..|.|++||--..+....+++-...|..+...  .+|+++++.+. ..+.
T Consensus       551 i~v~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvt--a~Gk~ilaTCk-~yll  627 (776)
T COG5167         551 IKVVESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVT--ANGKHILATCK-NYLL  627 (776)
T ss_pred             eeeeeehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEee--cCCcEEEEeec-ceEE
Confidence            22222     3344555555556999999999999999954433344456666778888874  78888776654 4666


Q ss_pred             EEEcC
Q psy7482         254 AYNLT  258 (327)
Q Consensus       254 i~d~~  258 (327)
                      +-|++
T Consensus       628 L~d~~  632 (776)
T COG5167         628 LTDVP  632 (776)
T ss_pred             EEecc
Confidence            77654

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.24  E-value=0.24  Score=44.02  Aligned_cols=102  Identities=15%  Similarity=0.264  Sum_probs=67.6

Q ss_pred             CEEEEecCCCeEEEEEccccccccccc-cccccEEEEEEC--CCCCeEEEecCCCcEEEEEcC---------CCeEEEeE
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFT--PEGSHLISCSDDGSIAIFRVG---------SWQLEKLF   92 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iw~~~---------~~~~~~~~   92 (327)
                      +..++-+....+.|||...+.....-. ...+.|.++.|.  |+++.+++.|....|.+|.-.         +...++.+
T Consensus        42 k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i  121 (631)
T PF12234_consen   42 KIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKI  121 (631)
T ss_pred             cEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEE
Confidence            333344445579999998776443322 357789999986  588889888999999998542         12233333


Q ss_pred             E-ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcC
Q psy7482          93 K-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV  128 (327)
Q Consensus        93 ~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  128 (327)
                      . ..+...+|.+..|.++|.+++.++  +.+.++|-.
T Consensus       122 ~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~  156 (631)
T PF12234_consen  122 DISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW  156 (631)
T ss_pred             EeecCCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence            1 344544599999999997665443  578888743

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.21  E-value=0.27  Score=41.32  Aligned_cols=141  Identities=16%  Similarity=0.174  Sum_probs=73.6

Q ss_pred             ccEEEEEe--CCCEEEEec-----------CCC-eEEEEEccc--ccc--ccccccccccEEEEEECCCCCeEEEecCCC
Q psy7482          15 ASVRSVAA--TSKLAASSG-----------ADE-TVVLYDMVK--RKQ--SGALMQHEGTITCLKFTPEGSHLISCSDDG   76 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~-----------~dg-~v~~w~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~   76 (327)
                      .....|+|  +|+++++-.           ..+ .|.+++-.+  ++.  ...+...-...+.+++.+++ ++ ++....
T Consensus        14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-ly-V~~~~~   91 (367)
T TIGR02604        14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VY-VATPPD   91 (367)
T ss_pred             CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EE-EeCCCe
Confidence            45667888  677766542           223 677776543  221  22333333456889998888 44 444443


Q ss_pred             cEEEEEcCCC-----eEE---EeEEec---ccCCceeeEEEecCCCEEEEEeCC-------------------CCEEEEE
Q psy7482          77 SIAIFRVGSW-----QLE---KLFKKA---HKGTAVNHISIHPSGKLALSVGKD-------------------KTLRTWN  126 (327)
Q Consensus        77 ~i~iw~~~~~-----~~~---~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d-------------------g~i~iwd  126 (327)
                      ..++.+....     +..   ..+...   +... ...+.|.|||.+.++-+..                   |.|.-++
T Consensus        92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~-~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~  170 (367)
T TIGR02604        92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHS-LNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN  170 (367)
T ss_pred             EEEEeCCCCCCCCCCccEEEEEccCCCCCccccc-ccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence            3333344211     211   112111   1223 7789999999876655421                   3345555


Q ss_pred             cCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482         127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      ...++.. .+. .    .......++|+|+|+++++-.
T Consensus       171 pdg~~~e-~~a-~----G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       171 PDGGKLR-VVA-H----GFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             cCCCeEE-EEe-c----CcCCCccceECCCCCEEEEcc
Confidence            5443321 111 1    112266889999888876644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.21  E-value=0.64  Score=39.36  Aligned_cols=71  Identities=13%  Similarity=0.171  Sum_probs=48.7

Q ss_pred             ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCc----eEEEee-------------eC----cEEEEE
Q psy7482         228 RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASR----IKGLAS-------------HR----NHLICI  286 (327)
Q Consensus       228 ~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----v~~~~~-------------~~----~~l~~~  286 (327)
                      .+.+++.  +|.+++.++...=|.|.++|+.++..++.+++..+.    +....-             .+    -+++-+
T Consensus       309 ~~~~i~~--sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIya  386 (415)
T PF14655_consen  309 EGESICL--SPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYA  386 (415)
T ss_pred             eEEEEEE--CCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEe
Confidence            4556666  589999988888899999999998877777654321    100000             00    244555


Q ss_pred             ecCCcEEEEEccCc
Q psy7482         287 TSAGDLVVWELNED  300 (327)
Q Consensus       287 ~~dg~v~iw~~~~~  300 (327)
                      -..|.|.||.+..+
T Consensus       387 prRg~lEvW~~~~g  400 (415)
T PF14655_consen  387 PRRGILEVWSMRQG  400 (415)
T ss_pred             ccCCeEEEEecCCC
Confidence            66889999999988

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=96.20  E-value=0.66  Score=39.39  Aligned_cols=148  Identities=12%  Similarity=0.159  Sum_probs=83.1

Q ss_pred             CCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCceeeEEEec----CCCEEEEEeCCCCEEEEEcCCCc-------
Q psy7482          65 EGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHP----SGKLALSVGKDKTLRTWNLVKGR-------  131 (327)
Q Consensus        65 ~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~-------  131 (327)
                      +...|++|+..|.++||+.....  ....+.....+.||..+..-+    .....++.-.-..+.+|.+....       
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~  115 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN  115 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence            34589999999999999985533  112222333444587776542    12223333455778888873211       


Q ss_pred             eeeeeeccccCccccceEEEEEcc----C-CcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCC
Q psy7482         132 SAYITNLSSYGVGFENLDSVVWSP----E-GLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNE  204 (327)
Q Consensus       132 ~~~~~~~~~~~~~~~~v~~~~~~~----~-~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~  204 (327)
                      .......-.+.. ......++.-|    . ..++++-+ ||.+.+|+-+.......+..---...+++.+. +.+++++.
T Consensus       116 ~~~L~~~yeh~l-~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~ss  194 (418)
T PF14727_consen  116 QYQLELIYEHSL-QRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTASS  194 (418)
T ss_pred             EEEEEEEEEEec-ccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEecC
Confidence            111111111100 11133444433    2 24566666 99999999776554444443222334567776 78888888


Q ss_pred             CCcEEEEEc
Q psy7482         205 ESAITAYNL  213 (327)
Q Consensus       205 d~~i~i~d~  213 (327)
                      +..+..|..
T Consensus       195 s~~l~~Yky  203 (418)
T PF14727_consen  195 SWTLECYKY  203 (418)
T ss_pred             ceeEEEecH
Confidence            888888865

>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []

Probab=96.09  E-value=1.2  Score=41.49  Aligned_cols=162  Identities=14%  Similarity=0.140  Sum_probs=99.4

Q ss_pred             cccccEEEEEEC---C----CCCeEEEecCCCcEEEEEcCC---------------CeEEEeEEec-ccCCceeeEEEec
Q psy7482          52 QHEGTITCLKFT---P----EGSHLISCSDDGSIAIFRVGS---------------WQLEKLFKKA-HKGTAVNHISIHP  108 (327)
Q Consensus        52 ~~~~~v~~~~~~---~----~~~~l~~~~~d~~i~iw~~~~---------------~~~~~~~~~~-~~~~~v~~~~~~~  108 (327)
                      .-..+|..++|.   .    ..++|++-. ...+.|+...-               ..++..+... -.+.+...++|+|
T Consensus        77 ~~~~PI~qI~fa~~~~~~~~~~~~l~Vrt-~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP  155 (765)
T PF10214_consen   77 DDGSPIKQIKFATLSESFDEKSRWLAVRT-ETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNP  155 (765)
T ss_pred             CCCCCeeEEEecccccccCCcCcEEEEEc-CCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEecc
Confidence            356789999998   2    223555444 44677776211               1223333111 1233478899999


Q ss_pred             -CCCEEEEEeCCCCEEEEEcCCCcee--eeeecc--cc------CccccceEEEEEccCCcEEEeecCCeEEEEEecCCc
Q psy7482         109 -SGKLALSVGKDKTLRTWNLVKGRSA--YITNLS--SY------GVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG  177 (327)
Q Consensus       109 -~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~--~~------~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~  177 (327)
                       +...||.....|...+|++......  ......  ..      ....+.-..+.|.++...|++++...+.++|+++..
T Consensus       156 ~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~~l~~~d~~~~~  235 (765)
T PF10214_consen  156 WDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRSKLMLIDFESNW  235 (765)
T ss_pred             CccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCCceEEEECCCCC
Confidence             5678999999999999999221111  011110  00      011133458889999899999999999999999876


Q ss_pred             eee---EecCCCceeEEEeecC--ceEEEeCCCCcEEEEEcCC
Q psy7482         178 VLQ---TLKSESKVHSVCFLNE--TTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       178 ~~~---~~~~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~  215 (327)
                      ...   ..+....|..+.-+|+  ++++.-. ...|...++..
T Consensus       236 ~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLT-s~eiiw~~~~~  277 (765)
T PF10214_consen  236 QTEYLVTAKTWSWILDVKRSPDNPSHVFILT-SKEIIWLDVKS  277 (765)
T ss_pred             ccchhccCCChhheeeEEecCCccceEEEEe-cCeEEEEEccC
Confidence            633   2225577888888886  4443332 35677777766

These proteins are found in fungi.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.04  E-value=0.11  Score=43.84  Aligned_cols=87  Identities=14%  Similarity=0.281  Sum_probs=61.2

Q ss_pred             cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC----------------C--EE
Q psy7482          52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG----------------K--LA  113 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------------~--~l  113 (327)
                      .....+.++..+|++++.|+...-|.|.++|+.++..++.+ ++..+..+.-+.....+                .  ++
T Consensus       305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmW-KGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~Lv  383 (415)
T PF14655_consen  305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMW-KGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLV  383 (415)
T ss_pred             cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhh-ccCccceEEEEEeecccccccccccccCCCCcceEEEE
Confidence            34556889999999998888888899999999998888877 66555423322222111                1  23


Q ss_pred             EEEeCCCCEEEEEcCCCceeeeeecc
Q psy7482         114 LSVGKDKTLRTWNLVKGRSAYITNLS  139 (327)
Q Consensus       114 ~~~~~dg~i~iwd~~~~~~~~~~~~~  139 (327)
                      +-+-.-|.|.+|.+++|..+..+...
T Consensus       384 IyaprRg~lEvW~~~~g~Rv~a~~v~  409 (415)
T PF14655_consen  384 IYAPRRGILEVWSMRQGPRVAAFNVG  409 (415)
T ss_pred             EEeccCCeEEEEecCCCCEEEEEEeC
Confidence            44566789999999998876655543

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=96.03  E-value=0.79  Score=38.79  Aligned_cols=142  Identities=13%  Similarity=0.210  Sum_probs=80.0

Q ss_pred             eeEEEecCCCEEEEEeCCCCEE-EEEcCCCcee-eeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCc--
Q psy7482         102 NHISIHPSGKLALSVGKDKTLR-TWNLVKGRSA-YITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG--  177 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~dg~i~-iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~--  177 (327)
                      ..+...+++.+++.+.. |.+. -||-  +... .......    ...+..+.+.+++.+++++..|.+..- ...++  
T Consensus       242 ~~v~~~~dG~~~~vg~~-G~~~~s~d~--G~~~W~~~~~~~----~~~l~~v~~~~dg~l~l~g~~G~l~~S-~d~G~~~  313 (398)
T PLN00033        242 STVNRSPDGDYVAVSSR-GNFYLTWEP--GQPYWQPHNRAS----ARRIQNMGWRADGGLWLLTRGGGLYVS-KGTGLTE  313 (398)
T ss_pred             eeEEEcCCCCEEEEECC-ccEEEecCC--CCcceEEecCCC----ccceeeeeEcCCCCEEEEeCCceEEEe-cCCCCcc
Confidence            34556677776666554 4433 3432  3221 1111221    123889999999999988887775443 33333  


Q ss_pred             ---eeeEec---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEee---ecccceEEEEEEecCCCcEEEEecC
Q psy7482         178 ---VLQTLK---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIK---ASASRIKGLVFFSIPQETTVCTGNE  248 (327)
Q Consensus       178 ---~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~s~~~~~l~~~~~  248 (327)
                         ......   ....+.++.+.+++.+++++..|.+..-. ..++.-...+   .-....+.+.|.  ++++.++ .+.
T Consensus       314 ~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~--~~~~g~~-~G~  389 (398)
T PLN00033        314 EDFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFF--DDKKGFV-LGN  389 (398)
T ss_pred             cccceeecccCCCCcceEEEEEcCCCcEEEEECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEc--CCCceEE-EeC
Confidence               223232   22358889999887777778888776553 3343322222   223467888883  4444444 456


Q ss_pred             CCeEEEE
Q psy7482         249 ESAITAY  255 (327)
Q Consensus       249 d~~i~i~  255 (327)
                      +|.|.-|
T Consensus       390 ~G~il~~  396 (398)
T PLN00033        390 DGVLLRY  396 (398)
T ss_pred             CcEEEEe
Confidence            6776544

>PRK10115 protease 2; Provisional

Probab=96.00  E-value=1.3  Score=40.82  Aligned_cols=191  Identities=9%  Similarity=0.040  Sum_probs=98.1

Q ss_pred             ccEEEEEECCCCCeEEEecC-----CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC------CCEE
Q psy7482          55 GTITCLKFTPEGSHLISCSD-----DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLR  123 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~  123 (327)
                      -.+..+.++|++++|+.+..     ...|++.|+.+++.+...   .... -..++|.+|++.|+....+      ..|.
T Consensus       127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~---i~~~-~~~~~w~~D~~~~~y~~~~~~~~~~~~v~  202 (686)
T PRK10115        127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPEL---LDNV-EPSFVWANDSWTFYYVRKHPVTLLPYQVW  202 (686)
T ss_pred             EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcc---ccCc-ceEEEEeeCCCEEEEEEecCCCCCCCEEE
Confidence            34777899999998886533     235888899887643222   1111 1458999998876665432      3577


Q ss_pred             EEEcCCCc--eeeeeeccccCccccceEEEEEccCCcEEEeec----CCeEEEEEec--CCceeeEecCCC-ceeEEEee
Q psy7482         124 TWNLVKGR--SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVE--KAGVLQTLKSES-KVHSVCFL  194 (327)
Q Consensus       124 iwd~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~--~~~~~~~~~~~~-~i~~~~~~  194 (327)
                      .+++.++.  ....+.....   .. ......+.++++++...    ++.+.+++..  .++....+.... ....+. +
T Consensus       203 ~h~lgt~~~~d~lv~~e~~~---~~-~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~  277 (686)
T PRK10115        203 RHTIGTPASQDELVYEEKDD---TF-YVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-H  277 (686)
T ss_pred             EEECCCChhHCeEEEeeCCC---CE-EEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-e
Confidence            78887773  2223321111   00 12333444777655442    5678888843  343332333222 222222 2


Q ss_pred             cCceEEEeC----CCCcEEEEEcCCCceeEEeeec-c-cceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         195 NETTVCTGN----EESAITAYNLTDGSHLWQIKAS-A-SRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       195 ~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~-~-~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      ..+.+..-+    ....|...++.+......+-.+ . ..+..+.+.   .+.++++...++.-+++-+
T Consensus       278 ~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~---~~~l~~~~~~~g~~~l~~~  343 (686)
T PRK10115        278 YQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF---TDWLVVEERQRGLTSLRQI  343 (686)
T ss_pred             CCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE---CCEEEEEEEeCCEEEEEEE
Confidence            233322222    2223433444421222333333 2 367777773   4566666767776555443

>KOG3630|consensus

Probab=95.90  E-value=0.16  Score=47.35  Aligned_cols=134  Identities=13%  Similarity=0.114  Sum_probs=82.0

Q ss_pred             ccEEEEEECCCCCeEEEe--cCCCcEEEEEcCCCeEEE-----eE---E--ecccCCceeeEEEecCC-CEEEEEeCCCC
Q psy7482          55 GTITCLKFTPEGSHLISC--SDDGSIAIFRVGSWQLEK-----LF---K--KAHKGTAVNHISIHPSG-KLALSVGKDKT  121 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~--~~d~~i~iw~~~~~~~~~-----~~---~--~~~~~~~v~~~~~~~~~-~~l~~~~~dg~  121 (327)
                      -++..+...+|+...++.  +.+-.|..||+++.....     .+   .  ...... ..++.|+|.- ...+....|+.
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf-~~~~~wnP~vp~n~av~l~dls  179 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVF-QLKNVWNPLVPLNSAVDLSDLS  179 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccc-cccccccCCccchhhhhccccc
Confidence            345666667776654433  334478899986532211     11   0  111122 5677888843 34566678899


Q ss_pred             EEEEEcCCCceeee-eeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-----CCCceeEEEee
Q psy7482         122 LRTWNLVKGRSAYI-TNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-----SESKVHSVCFL  194 (327)
Q Consensus       122 i~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-----~~~~i~~~~~~  194 (327)
                      |++..+........ ++...      ..++++|+|.|+.+++|. .|++.-|... .+....+.     ....|.+++|.
T Consensus       180 l~V~~~~~~~~~v~s~p~t~------~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl  252 (1405)
T KOG3630|consen  180 LRVKSTKQLAQNVTSFPVTN------SQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWL  252 (1405)
T ss_pred             hhhhhhhhhhhhhcccCccc------ceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEe
Confidence            98887754332211 12222      389999999999999997 7888877643 33223322     35789999998


Q ss_pred             cC
Q psy7482         195 NE  196 (327)
Q Consensus       195 ~~  196 (327)
                      ..
T Consensus       253 ~t  254 (1405)
T KOG3630|consen  253 ST  254 (1405)
T ss_pred             cc
Confidence            76

>KOG3630|consensus

Probab=95.87  E-value=0.087  Score=48.95  Aligned_cols=142  Identities=13%  Similarity=0.016  Sum_probs=86.3

Q ss_pred             EEEEEe-CCCEEEE--ecCCCeEEEEEcccccccc-----ccc------cccccEEEEEECCCC-CeEEEecCCCcEEEE
Q psy7482          17 VRSVAA-TSKLAAS--SGADETVVLYDMVKRKQSG-----ALM------QHEGTITCLKFTPEG-SHLISCSDDGSIAIF   81 (327)
Q Consensus        17 v~~~~~-~~~~l~~--~~~dg~v~~w~~~~~~~~~-----~~~------~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw   81 (327)
                      +.-+++ |+...++  .+.+-.|..||+++.....     -+.      ....-..++.|+|.- ...+....|+.|++.
T Consensus       104 ~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~  183 (1405)
T KOG3630|consen  104 VIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVK  183 (1405)
T ss_pred             eEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhh
Confidence            334444 6554433  3344478999987643221     111      122345678888843 235667788899888


Q ss_pred             EcCCCeEE-EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE
Q psy7482          82 RVGSWQLE-KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY  160 (327)
Q Consensus        82 ~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  160 (327)
                      .+...... ..+  ..... .++++|+|.|+.++.|-..|++.-|... .+....+..+.... ...|.+++|-....++
T Consensus       184 ~~~~~~~~v~s~--p~t~~-~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e-~yrvl~v~Wl~t~efl  258 (1405)
T KOG3630|consen  184 STKQLAQNVTSF--PVTNS-QTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEE-NYRVLSVTWLSTQEFL  258 (1405)
T ss_pred             hhhhhhhhhccc--Ccccc-eeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCC-CcceeEEEEecceeEE
Confidence            76532221 222  22333 8999999999999999999999999764 33323322222211 3569999998877766


Q ss_pred             Eee
Q psy7482         161 AIP  163 (327)
Q Consensus       161 ~~~  163 (327)
                      ++-
T Consensus       259 vvy  261 (1405)
T KOG3630|consen  259 VVY  261 (1405)
T ss_pred             EEe
Confidence            654

>KOG2280|consensus

Probab=95.84  E-value=1.3  Score=39.78  Aligned_cols=194  Identities=10%  Similarity=0.106  Sum_probs=99.0

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe--cccCCceeeEEEecCCC
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK--AHKGTAVNHISIHPSGK  111 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~  111 (327)
                      -.|+|++. +|.++..+.-...++..+.|+.+. .|++...+|++++|++-. +.+.....  ......|..+.+..+| 
T Consensus        64 ~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~g-e~ie~~svg~e~~~~~I~ec~~f~~G-  139 (829)
T KOG2280|consen   64 PYIRIFNI-SGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLG-EFIESNSVGFESQMSDIVECRFFHNG-  139 (829)
T ss_pred             eeEEEEec-cccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecch-hhhcccccccccccCceeEEEEecCc-
Confidence            45888886 466666655444578899999655 566778999999999853 22222111  1111125555555555 


Q ss_pred             EEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc--EEEeecCC--eEEEEEecCC-ceeeEec-CC
Q psy7482         112 LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL--LYAIPIQN--KAVVFSVEKA-GVLQTLK-SE  185 (327)
Q Consensus       112 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~--~i~i~d~~~~-~~~~~~~-~~  185 (327)
                       ++.-..+|.+.+-+-........  .+..+....+-.|-...+++.  .+...-+-  ...++..... .....+. ..
T Consensus       140 -Vavlt~~g~v~~i~~~~~~~~~~--~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~~  216 (829)
T KOG2280|consen  140 -VAVLTVSGQVILINGVEEPKLRK--MPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWPN  216 (829)
T ss_pred             -eEEEecCCcEEEEcCCCcchhhh--CCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCCC
Confidence             33334456555543222211111  221111111112222222221  11111010  0011111111 1112222 34


Q ss_pred             CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEE
Q psy7482         186 SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFF  235 (327)
Q Consensus       186 ~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~  235 (327)
                      +.+..+..||+ ++|+.-...|.+.+-+....+.+..+.  .|.. ...++|.
T Consensus       217 ~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~-p~qm~Wc  268 (829)
T KOG2280|consen  217 SSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDP-PKQMAWC  268 (829)
T ss_pred             ceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCc-hHhceee
Confidence            77888999998 888888999999999887777666654  2322 2355664

>KOG2280|consensus

Probab=95.83  E-value=0.72  Score=41.32  Aligned_cols=194  Identities=13%  Similarity=0.144  Sum_probs=96.4

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      -.|+|++.. |+.+..+ .-.+.. +-.+.|+.+. .|+....+|++++|++. |+......... ......|..+.+..
T Consensus        64 ~~I~If~~s-G~lL~~~-~w~~~~-lI~mgWs~~e-eLI~v~k~g~v~Vy~~~-ge~ie~~svg~-e~~~~~I~ec~~f~  137 (829)
T KOG2280|consen   64 PYIRIFNIS-GQLLGRI-LWKHGE-LIGMGWSDDE-ELICVQKDGTVHVYGLL-GEFIESNSVGF-ESQMSDIVECRFFH  137 (829)
T ss_pred             eeEEEEecc-ccchHHH-HhcCCC-eeeecccCCc-eEEEEeccceEEEeecc-hhhhccccccc-ccccCceeEEEEec
Confidence            347888864 5666655 333334 8889999765 56667899999999985 33333221111 11112255555555


Q ss_pred             CCcEEEeecCCeEEEEEecCCceeeEec--CCCceeEEEe--ecCc---e--EEEeCCCCcEEEEEcCCC-ceeEEeeec
Q psy7482         156 EGLLYAIPIQNKAVVFSVEKAGVLQTLK--SESKVHSVCF--LNET---T--VCTGNEESAITAYNLTDG-SHLWQIKAS  225 (327)
Q Consensus       156 ~~~~l~~~~~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~--~~~~---~--l~~~~~d~~i~i~d~~~~-~~~~~~~~~  225 (327)
                      +|-.+.+.++.-+.+-+.... .+..++  ........+|  .+++   .  +...-..+ ..++..... .....+...
T Consensus       138 ~GVavlt~~g~v~~i~~~~~~-~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~  215 (829)
T KOG2280|consen  138 NGVAVLTVSGQVILINGVEEP-KLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWP  215 (829)
T ss_pred             CceEEEecCCcEEEEcCCCcc-hhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCC
Confidence            554444443333333333321 222222  1111221223  2221   1  11110111 011111111 112222222


Q ss_pred             ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee--cccCceEEEeeeC
Q psy7482         226 ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK--ASASRIKGLASHR  280 (327)
Q Consensus       226 ~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~  280 (327)
                      ...+..+..  ||+.++|+--...|.|.+-+.+..+.+.++.  .|. +...++|..
T Consensus       216 ~~~~~ki~V--S~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~-~p~qm~Wcg  269 (829)
T KOG2280|consen  216 NSSVVKISV--SPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHD-PPKQMAWCG  269 (829)
T ss_pred             CceEEEEEE--cCCcceEEEEecCCcEEEEecchhhhhhccCCCCCC-chHhceeec
Confidence            344666677  5899999999999999999888777666655  232 222455544

>KOG1916|consensus

Probab=95.82  E-value=0.01  Score=53.35  Aligned_cols=135  Identities=16%  Similarity=0.235  Sum_probs=82.8

Q ss_pred             CCeEEEEEec--CCceeeEec------CCCceeEEEeec---C-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482         165 QNKAVVFSVE--KAGVLQTLK------SESKVHSVCFLN---E-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL  232 (327)
Q Consensus       165 ~~~i~i~d~~--~~~~~~~~~------~~~~i~~~~~~~---~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  232 (327)
                      -|.+.+||+.  .|+....+.      ....+.-+.|.|   + -++..+-.++.+++........ ..+.+|...+..+
T Consensus       152 vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~  230 (1283)
T KOG1916|consen  152 VGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDM  230 (1283)
T ss_pred             hhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccH
Confidence            3667788765  344333222      234445566655   3 5667777888998887655432 3345577666555


Q ss_pred             EEEe---------cCCCcEEEEecCCCeEEEEEcC-----CCceeEEeeccc-CceEEEeeeC-----------cEEEEE
Q psy7482         233 VFFS---------IPQETTVCTGNEESAITAYNLT-----DGSHLWHIKASA-SRIKGLASHR-----------NHLICI  286 (327)
Q Consensus       233 ~~~~---------s~~~~~l~~~~~d~~i~i~d~~-----~~~~~~~~~~~~-~~v~~~~~~~-----------~~l~~~  286 (327)
                      +|+.         ||||..++.++.||.++.|.+.     ...+++..+.|. .+-.|.-|+.           .+++++
T Consensus       231 a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itt  310 (1283)
T KOG1916|consen  231 AFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITT  310 (1283)
T ss_pred             HHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEec
Confidence            5421         5999999999999988777643     334666777776 3333333433           456666


Q ss_pred             ecCC-cEEEEEccCc
Q psy7482         287 TSAG-DLVVWELNED  300 (327)
Q Consensus       287 ~~dg-~v~iw~~~~~  300 (327)
                      ++-| .+++|.-..-
T Consensus       311 td~nre~k~w~~a~w  325 (1283)
T KOG1916|consen  311 TDVNREEKFWAEAPW  325 (1283)
T ss_pred             ccCCcceeEeeccch
Confidence            6544 4889876543

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.60  E-value=0.12  Score=39.69  Aligned_cols=71  Identities=17%  Similarity=0.307  Sum_probs=48.6

Q ss_pred             EecCCCEEEEEeCCCCEEEEEcCCCceeeee-ecccc-C-------ccccceEEEEEccCCcEEEeecCCeEEEEEecCC
Q psy7482         106 IHPSGKLALSVGKDKTLRTWNLVKGRSAYIT-NLSSY-G-------VGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKA  176 (327)
Q Consensus       106 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~-~-------~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~  176 (327)
                      +..+++++++.+.+|.+++||+.+++..... .+... .       .....|..+.++.+|.-+++-++|..+.|+..-+
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~L~   97 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPDLG   97 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccccc
Confidence            3446889999999999999999987764322 11000 0       2234478888888887777777778888876543

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.43  E-value=1  Score=35.64  Aligned_cols=146  Identities=14%  Similarity=0.162  Sum_probs=82.1

Q ss_pred             cEEEEEe--CCCEEEEec---CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEE-cCCCeEE
Q psy7482          16 SVRSVAA--TSKLAASSG---ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR-VGSWQLE   89 (327)
Q Consensus        16 ~v~~~~~--~~~~l~~~~---~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~-~~~~~~~   89 (327)
                      .+.+.+.  +++.+|...   ....++++..  +....... ....+....|.+++...+....+...+++. ..++...
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~  101 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE  101 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence            4555555  777666544   3344555543  33222221 223688889999987777766666667764 3333322


Q ss_pred             Ee-EEecccCCceeeEEEecCCCEEEEEe---CCCCEEEEEcCCCcee---ee-eeccccCccccceEEEEEccCCcEEE
Q psy7482          90 KL-FKKAHKGTAVNHISIHPSGKLALSVG---KDKTLRTWNLVKGRSA---YI-TNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        90 ~~-~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~---~~-~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      .. .........|..+.++|||..++...   .++.|.+--+.....-   .. ............+..+.|.+++.+++
T Consensus       102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V  181 (253)
T PF10647_consen  102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV  181 (253)
T ss_pred             eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence            21 11111111499999999999887765   3467777654321111   11 00111111123489999999999888


Q ss_pred             eec
Q psy7482         162 IPI  164 (327)
Q Consensus       162 ~~~  164 (327)
                      .+.
T Consensus       182 ~~~  184 (253)
T PF10647_consen  182 LGR  184 (253)
T ss_pred             EeC
Confidence            775

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=95.40  E-value=1.4  Score=37.18  Aligned_cols=191  Identities=10%  Similarity=0.162  Sum_probs=92.5

Q ss_pred             CCEEEEec-CCCeEEEEEcccc----cccccccc---cc----ccEEEEEECCCCCeEEEecC------CCcEEEEEcCC
Q psy7482          24 SKLAASSG-ADETVVLYDMVKR----KQSGALMQ---HE----GTITCLKFTPEGSHLISCSD------DGSIAIFRVGS   85 (327)
Q Consensus        24 ~~~l~~~~-~dg~v~~w~~~~~----~~~~~~~~---~~----~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~~   85 (327)
                      .++|+..+ ..+.|+|.|+.+.    +..+.+..   +.    .....+.--|+|+.++++-.      -|-+.+.|-++
T Consensus        87 Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~t  166 (461)
T PF05694_consen   87 RRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGET  166 (461)
T ss_dssp             S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT
T ss_pred             CCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCcc
Confidence            45666555 7788999998743    22222221   11    12223334478888887522      35688999888


Q ss_pred             CeEEEeEEecccC-CceeeEEEecCCCEEEEEeC--------------------CCCEEEEEcCCCceeeeeeccccCcc
Q psy7482          86 WQLEKLFKKAHKG-TAVNHISIHPSGKLALSVGK--------------------DKTLRTWNLVKGRSAYITNLSSYGVG  144 (327)
Q Consensus        86 ~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~--------------------dg~i~iwd~~~~~~~~~~~~~~~~~~  144 (327)
                      .+........... .--...-|.|..+.++|...                    ..++.+||+.+.+.++.+.+....  
T Consensus       167 f~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g--  244 (461)
T PF05694_consen  167 FEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEG--  244 (461)
T ss_dssp             --EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTE--
T ss_pred             ccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCC--
Confidence            8887777332221 11456778888888887653                    246999999999999998887542  


Q ss_pred             ccceEEEEEcc--CCcEEEee--cCCeEEEEEe-cCCc----eeeEecC------------------CCceeEEEeecC-
Q psy7482         145 FENLDSVVWSP--EGLLYAIP--IQNKAVVFSV-EKAG----VLQTLKS------------------ESKVHSVCFLNE-  196 (327)
Q Consensus       145 ~~~v~~~~~~~--~~~~l~~~--~~~~i~i~d~-~~~~----~~~~~~~------------------~~~i~~~~~~~~-  196 (327)
                       ..+..+.|..  +...=.++  ...+|..|-- +.++    .+..+..                  ..-|+.|..|.| 
T Consensus       245 -~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDD  323 (461)
T PF05694_consen  245 -QMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDD  323 (461)
T ss_dssp             -EEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS
T ss_pred             -CceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCC
Confidence             2255666654  44433333  3566655543 3332    1111210                  244788999988 


Q ss_pred             ceE-EEeCCCCcEEEEEcCCCc
Q psy7482         197 TTV-CTGNEESAITAYNLTDGS  217 (327)
Q Consensus       197 ~~l-~~~~~d~~i~i~d~~~~~  217 (327)
                      .+| ++.-.+|.++.||+.+..
T Consensus       324 rfLYvs~W~~GdvrqYDISDP~  345 (461)
T PF05694_consen  324 RFLYVSNWLHGDVRQYDISDPF  345 (461)
T ss_dssp             -EEEEEETTTTEEEEEE-SSTT
T ss_pred             CEEEEEcccCCcEEEEecCCCC
Confidence            544 456689999999998743

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=95.35  E-value=0.35  Score=37.16  Aligned_cols=74  Identities=14%  Similarity=0.136  Sum_probs=53.2

Q ss_pred             ccEEEEEeCCCEEEEecCCCeEEEEEccccccccc-------cc-------cccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482          15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGA-------LM-------QHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus        15 ~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~-------~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      .++..+..++++|++-..+|.+++||+.+++.+..       +.       .....|..+.++.+|.-+++-+ +|..+.
T Consensus        13 s~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~   91 (219)
T PF07569_consen   13 SPVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYS   91 (219)
T ss_pred             CceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEE
Confidence            34555667899999999999999999998865432       11       2456788888888887666554 577888


Q ss_pred             EEcCCCeEE
Q psy7482          81 FRVGSWQLE   89 (327)
Q Consensus        81 w~~~~~~~~   89 (327)
                      |+.+-+.-.
T Consensus        92 y~~~L~~W~  100 (219)
T PF07569_consen   92 YSPDLGCWI  100 (219)
T ss_pred             eccccceeE
Confidence            887644433

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=95.25  E-value=0.58  Score=39.98  Aligned_cols=144  Identities=11%  Similarity=0.097  Sum_probs=86.5

Q ss_pred             CCCEEE-EecCCCeEEEEEccccccccccccccccEEEEEECCCCC-------eEEEecCCCcEEEEEcC-CCeEEEeE-
Q psy7482          23 TSKLAA-SSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-------HLISCSDDGSIAIFRVG-SWQLEKLF-   92 (327)
Q Consensus        23 ~~~~l~-~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~d~~i~iw~~~-~~~~~~~~-   92 (327)
                      +.++|. .|+....++--|++.|+.+....-|..-  -+.|.|+.+       .-++|-.+..|.-.|.+ .|..+... 
T Consensus       478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e  555 (776)
T COG5167         478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE  555 (776)
T ss_pred             CcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee
Confidence            334443 5566667777888899988888877654  567887432       22345455555555543 23222221 


Q ss_pred             -EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEE
Q psy7482          93 -KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVF  171 (327)
Q Consensus        93 -~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~  171 (327)
                       +.-.......+..-. ...++++++..|.|++||--.-+....  ++..   ...|..+..+.+|+++++.....+.+.
T Consensus       556 sKdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig~rAKta--lP~l---G~aIk~idvta~Gk~ilaTCk~yllL~  629 (776)
T COG5167         556 SKDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIGKRAKTA--LPGL---GDAIKHIDVTANGKHILATCKNYLLLT  629 (776)
T ss_pred             ehhccccccccccccc-cCceEEEecCCCceeeehhhcchhhhc--Cccc---ccceeeeEeecCCcEEEEeecceEEEE
Confidence             011111112333322 345899999999999999532222111  2222   234889999999999988888899888


Q ss_pred             Eec
Q psy7482         172 SVE  174 (327)
Q Consensus       172 d~~  174 (327)
                      |++
T Consensus       630 d~~  632 (776)
T COG5167         630 DVP  632 (776)
T ss_pred             ecc
Confidence            875

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=95.23  E-value=0.15  Score=27.27  Aligned_cols=31  Identities=32%  Similarity=0.598  Sum_probs=25.8

Q ss_pred             ccEEEEEECCCC---CeEEEecCCCcEEEEEcCC
Q psy7482          55 GTITCLKFTPEG---SHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus        55 ~~v~~~~~~~~~---~~l~~~~~d~~i~iw~~~~   85 (327)
                      +.|.+++|+|+.   ++|+.+-.-|.|.++|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            468999999843   5888888889999999985

It contains a characteristic DLL sequence motif.

>KOG2247|consensus

Probab=95.23  E-value=0.0019  Score=53.74  Aligned_cols=139  Identities=16%  Similarity=0.235  Sum_probs=97.4

Q ss_pred             eEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEee-
Q psy7482         148 LDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIK-  223 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~-  223 (327)
                      .....|.|.+.-++.+. +..+..||- .++........+....++|..+  ..++.+-..+.+.+||+.+... .++. 
T Consensus        37 pi~~~w~~e~~nlavaca~tiv~~YD~-agq~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eyt-qqLE~  114 (615)
T KOG2247|consen   37 PIIHRWRPEGHNLAVACANTIVIYYDK-AGQVILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYT-QQLES  114 (615)
T ss_pred             cceeeEecCCCceehhhhhhHHHhhhh-hcceecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhH-HHHhc
Confidence            34556777766566665 777788874 3555555556666777888776  4566777889999999976432 1121 


Q ss_pred             --ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEecCCcE
Q psy7482         224 --ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITSAGDL  292 (327)
Q Consensus       224 --~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v  292 (327)
                        .|....  +.|  ++.+..++.+...|.+.|++..+.+.+...-.|...++++++.+ .+.+.++.|..+
T Consensus       115 gg~~s~sl--l~w--sKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~dcd~~L  182 (615)
T KOG2247|consen  115 GGTSSKSL--LAW--SKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCDCDNTL  182 (615)
T ss_pred             cCcchHHH--Hhh--ccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecCcHHHH
Confidence              122222  456  47888888898999999999887776666666888999999999 777777776543

>KOG1916|consensus

Probab=95.20  E-value=0.02  Score=51.54  Aligned_cols=113  Identities=13%  Similarity=0.205  Sum_probs=69.5

Q ss_pred             ccCCccEEEEEe---CCCEEEEecCCCeEEEEEcc--cccccccc-----ccccccEEEEEECC---CCCeEEEecCCCc
Q psy7482          11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMV--KRKQSGAL-----MQHEGTITCLKFTP---EGSHLISCSDDGS   77 (327)
Q Consensus        11 ~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~--~~~~~~~~-----~~~~~~v~~~~~~~---~~~~l~~~~~d~~   77 (327)
                      +|..+.|-.+.|   +-..++  -.=|.+.+||+.  .|+....+     ..-...+.-+.|.|   +.-++..+-.++.
T Consensus       129 kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~  206 (1283)
T KOG1916|consen  129 KGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGE  206 (1283)
T ss_pred             hcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCc
Confidence            466777888888   333333  334678899875  34433222     12223345555655   5667778888899


Q ss_pred             EEEEEcCCCeEEEeEEecccCCceeeE-----------EEecCCCEEEEEeCCCCEEEEEcC
Q psy7482          78 IAIFRVGSWQLEKLFKKAHKGTAVNHI-----------SIHPSGKLALSVGKDKTLRTWNLV  128 (327)
Q Consensus        78 i~iw~~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~dg~i~iwd~~  128 (327)
                      +++.++.+... ..+ ..|... +..+           ..+|||+.++.++.||.++.|.+.
T Consensus       207 i~lL~~~ra~~-~l~-rsHs~~-~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  207 IRLLNINRALR-SLF-RSHSQR-VTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             eeEeeechHHH-HHH-HhcCCC-cccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence            98887754322 222 334433 3222           368999999999999999888764

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=94.95  E-value=1.8  Score=35.84  Aligned_cols=233  Identities=14%  Similarity=0.219  Sum_probs=115.7

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE------ecccCCceeeEEEecC---CCEEEEEeCC-------
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK------KAHKGTAVNHISIHPS---GKLALSVGKD-------  119 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------~~~~~~~v~~~~~~~~---~~~l~~~~~d-------  119 (327)
                      ..+.|+|.|||+++++ ...|.|++++ ..+.....+.      ...... ...++++|+   ..+|+.....       
T Consensus         3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~g-llgia~~p~f~~n~~lYv~~t~~~~~~~~   79 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERG-LLGIAFHPDFASNGYLYVYYTNADEDGGD   79 (331)
T ss_dssp             SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBS-EEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred             CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCC-cccceeccccCCCCEEEEEEEcccCCCCC
Confidence            3578999999877665 5599999999 4444312210      112233 789999994   2344443331       


Q ss_pred             --CCEEEEEcCCC--c----eeeeeeccccCccccceEEEEEccCCcEEEeecC--------------CeEEEEEecCCc
Q psy7482         120 --KTLRTWNLVKG--R----SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ--------------NKAVVFSVEKAG  177 (327)
Q Consensus       120 --g~i~iwd~~~~--~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------~~i~i~d~~~~~  177 (327)
                        ..|.-|....+  .    .......+...........+.|.|+|.++++..+              |.|.-.+.. ++
T Consensus        80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d-G~  158 (331)
T PF07995_consen   80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPD-GS  158 (331)
T ss_dssp             EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETT-SS
T ss_pred             cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEeccc-Cc
Confidence              23444544433  1    1111111210111223677999999977665432              233333322 11


Q ss_pred             e-------------eeEec-CCCceeEEEeecC-ceEEEeC--CCCcEEEEEcCCCc-----------------------
Q psy7482         178 V-------------LQTLK-SESKVHSVCFLNE-TTVCTGN--EESAITAYNLTDGS-----------------------  217 (327)
Q Consensus       178 ~-------------~~~~~-~~~~i~~~~~~~~-~~l~~~~--~d~~i~i~d~~~~~-----------------------  217 (327)
                      .             ...+. .-.....++|+|. +.|.++.  .++.=.|.-+..+.                       
T Consensus       159 ~p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~  238 (331)
T PF07995_consen  159 IPADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPS  238 (331)
T ss_dssp             B-TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS
T ss_pred             CCCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccC
Confidence            0             01111 1233567899998 7777653  22222222222211                       


Q ss_pred             ------eeEEeeecccceEEEEEEec-----CCCcEEEEecCCCeEEEEEcCCCceeE---E-eecccCceEEEeeeC--
Q psy7482         218 ------HLWQIKASASRIKGLVFFSI-----PQETTVCTGNEESAITAYNLTDGSHLW---H-IKASASRIKGLASHR--  280 (327)
Q Consensus       218 ------~~~~~~~~~~~v~~~~~~~s-----~~~~~l~~~~~d~~i~i~d~~~~~~~~---~-~~~~~~~v~~~~~~~--  280 (327)
                            ++..+..| ..+..+.|...     -.+.++++.-..+.|....+..+..+.   . +......+.++++.|  
T Consensus       239 ~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG  317 (331)
T PF07995_consen  239 CPGFVPPVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDG  317 (331)
T ss_dssp             -TTS---SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTS
T ss_pred             CCCcCccceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCC
Confidence                  22233333 44666776521     145677777667788888887554322   2 223344788999888  


Q ss_pred             cEEEEEecCCcEE
Q psy7482         281 NHLICITSAGDLV  293 (327)
Q Consensus       281 ~~l~~~~~dg~v~  293 (327)
                      .+.++-+.+|.|.
T Consensus       318 ~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  318 ALYVSDDSDGKIY  330 (331)
T ss_dssp             EEEEEE-TTTTEE
T ss_pred             eEEEEECCCCeEe
Confidence            5555555677664

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG2247|consensus

Probab=94.92  E-value=0.0026  Score=52.90  Aligned_cols=143  Identities=13%  Similarity=0.147  Sum_probs=94.5

Q ss_pred             eeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCcee
Q psy7482         102 NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVL  179 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~  179 (327)
                      ....|-+.+..++.++.+..+..||- .++.......+..      ...++|..++..+++-.  .+.+.+||+.+....
T Consensus        38 i~~~w~~e~~nlavaca~tiv~~YD~-agq~~le~n~tg~------aldm~wDkegdvlavlAek~~piylwd~n~eytq  110 (615)
T KOG2247|consen   38 IIHRWRPEGHNLAVACANTIVIYYDK-AGQVILELNPTGK------ALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ  110 (615)
T ss_pred             ceeeEecCCCceehhhhhhHHHhhhh-hcceecccCCchh------HhhhhhccccchhhhhhhcCCCeeechhhhhhHH
Confidence            34567787777888888888999984 3444333333333      66788888887655543  799999998764322


Q ss_pred             e-EecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEE
Q psy7482         180 Q-TLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITA  254 (327)
Q Consensus       180 ~-~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i  254 (327)
                      + .+.....-.-+.|++. ..++.+...|.+.+++..+.+.+...-.|..+++++++.   -..+.+.++.|..+.+
T Consensus       111 qLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~---lEd~vil~dcd~~L~v  184 (615)
T KOG2247|consen  111 QLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVT---LEDYVILCDCDNTLSV  184 (615)
T ss_pred             HHhccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEec---ccceeeecCcHHHHHH
Confidence            1 1112222222678887 678888899999999988776665555588899999983   3445555555554433

>KOG2377|consensus

Probab=94.86  E-value=1.2  Score=37.53  Aligned_cols=136  Identities=9%  Similarity=0.121  Sum_probs=78.2

Q ss_pred             eeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceee
Q psy7482         102 NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQ  180 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~  180 (327)
                      +.+-|...++.+ .+...|.+.-|.......-....+..  ...++|.++.|++|++.+|+-- +.+|.+++....+...
T Consensus        26 ngvFfDDaNkql-favrSggatgvvvkgpndDVpiSfdm--~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l  102 (657)
T KOG2377|consen   26 NGVFFDDANKQL-FAVRSGGATGVVVKGPNDDVPISFDM--DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQL  102 (657)
T ss_pred             cceeeccCcceE-EEEecCCeeEEEEeCCCCCCCceeee--cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhh
Confidence            334444333333 34444566666654332211111111  1234699999999999999985 9999999875444333


Q ss_pred             Eec-----CCCceeEEEeecCceEEEeCCCCcEEEEEcCCC-ceeEEeeecccceEEEEEEecCCCcEE
Q psy7482         181 TLK-----SESKVHSVCFLNETTVCTGNEESAITAYNLTDG-SHLWQIKASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       181 ~~~-----~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      ...     ....|...+|+.+.-++..+..| +.+|..... +.++..+.|...|.--.|.  ++.+.+
T Consensus       103 ~~~~~ck~k~~~IlGF~W~~s~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc--~et~v~  168 (657)
T KOG2377|consen  103 EYTQECKTKNANILGFCWTSSTEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYC--PETAVI  168 (657)
T ss_pred             HHHHHhccCcceeEEEEEecCeeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEc--cccceE
Confidence            222     34458899998875555544443 555554332 3345556677777777775  555443

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.84  E-value=0.18  Score=26.91  Aligned_cols=28  Identities=21%  Similarity=0.259  Sum_probs=20.5

Q ss_pred             eEEEEEccCC---cEEEeec-CCeEEEEEecC
Q psy7482         148 LDSVVWSPEG---LLYAIPI-QNKAVVFSVEK  175 (327)
Q Consensus       148 v~~~~~~~~~---~~l~~~~-~~~i~i~d~~~  175 (327)
                      ++++.|+|+.   .+|+.+. .+.+.++|+++
T Consensus         3 vR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    3 VRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             eEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            7788888744   3777776 67888888874

It contains a characteristic DLL sequence motif.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=94.84  E-value=1.5  Score=40.22  Aligned_cols=27  Identities=11%  Similarity=0.199  Sum_probs=15.9

Q ss_pred             CceeEEEeecC-ceEEEeCCCCcEEEEEc
Q psy7482         186 SKVHSVCFLNE-TTVCTGNEESAITAYNL  213 (327)
Q Consensus       186 ~~i~~~~~~~~-~~l~~~~~d~~i~i~d~  213 (327)
                      -.|..+.++|+ .+++..+.. .|.|..+
T Consensus        85 f~v~~i~~n~~g~~lal~G~~-~v~V~~L  112 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPR-GVVVLEL  112 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCC-cEEEEEe
Confidence            35777888887 445555554 3444444

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=94.80  E-value=1.3  Score=33.49  Aligned_cols=147  Identities=12%  Similarity=0.157  Sum_probs=82.2

Q ss_pred             eEEEEEccCCcEEEeecCCeEEEEEec--CCceeeEecCCCceeEEEeecC-ceEEEeCCC------CcEEEE---EcC-
Q psy7482         148 LDSVVWSPEGLLYAIPIQNKAVVFSVE--KAGVLQTLKSESKVHSVCFLNE-TTVCTGNEE------SAITAY---NLT-  214 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~~~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d------~~i~i~---d~~-  214 (327)
                      ...++-.+.+.++++.....|.+|++.  ..+.+..+..-+.|..+.++.. +++++--.+      ..+|+|   +.. 
T Consensus        20 P~~~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~   99 (215)
T PF14761_consen   20 PTAVCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQK   99 (215)
T ss_pred             cceeeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhc
Confidence            334444454555565668889999987  4456777777789999999886 777764221      255665   221 


Q ss_pred             -CCceeE-Eeee---------------------cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce------eEE
Q psy7482         215 -DGSHLW-QIKA---------------------SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH------LWH  265 (327)
Q Consensus       215 -~~~~~~-~~~~---------------------~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~------~~~  265 (327)
                       ..+++. .+-+                     -..++.+++..+ -.|++++..  ++.+.+|.+.....      ...
T Consensus       100 ~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~-~tG~LlVg~--~~~l~lf~l~~~~~~~~~~~~lD  176 (215)
T PF14761_consen  100 EENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCP-VTGNLLVGC--GNKLVLFTLKYQTIQSEKFSFLD  176 (215)
T ss_pred             ccCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecC-CCCCEEEEc--CCEEEEEEEEEEEEecccccEEe
Confidence             111111 1111                     123456677763 455555433  46788887654332      111


Q ss_pred             ee-----ccc-CceEEEeeeCcEEEEEecCCcEEEEEcc
Q psy7482         266 IK-----ASA-SRIKGLASHRNHLICITSAGDLVVWELN  298 (327)
Q Consensus       266 ~~-----~~~-~~v~~~~~~~~~l~~~~~dg~v~iw~~~  298 (327)
                      +.     -|. -.+..+++...++|..+ +-.+++..+.
T Consensus       177 Fe~~l~~~~~~~~p~~v~ic~~yiA~~s-~~ev~Vlkl~  214 (215)
T PF14761_consen  177 FERSLIDHIDNFKPTQVAICEGYIAVMS-DLEVLVLKLE  214 (215)
T ss_pred             chhhhhheecCceEEEEEEEeeEEEEec-CCEEEEEEEe
Confidence            11     111 12455666667877776 5567776653

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=94.63  E-value=2.9  Score=36.68  Aligned_cols=151  Identities=14%  Similarity=0.246  Sum_probs=80.0

Q ss_pred             CCeEEEe---cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC
Q psy7482          66 GSHLISC---SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG  142 (327)
Q Consensus        66 ~~~l~~~---~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  142 (327)
                      +-+++..   ...+...+.|.+ |.....+ ...... ...+...++|.+++...  ..+..+|+. |+......++...
T Consensus       115 gl~~~~~~~~~~~~~~~~iD~~-G~Vrw~~-~~~~~~-~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~  188 (477)
T PF05935_consen  115 GLYFVNGNDWDSSSYTYLIDNN-GDVRWYL-PLDSGS-DNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGY  188 (477)
T ss_dssp             -EEEEEETT--BEEEEEEEETT-S-EEEEE--GGGT---SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTE
T ss_pred             cEEEEeCCCCCCCceEEEECCC-ccEEEEE-ccCccc-cceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcc
Confidence            3345555   345567777764 5666655 333322 22266778888776554  789999974 7766666666531


Q ss_pred             ccccceEEEEEccCCcEEEeec--------------CCeEEEEEecCCceeeEec---C----C----------------
Q psy7482         143 VGFENLDSVVWSPEGLLYAIPI--------------QNKAVVFSVEKAGVLQTLK---S----E----------------  185 (327)
Q Consensus       143 ~~~~~v~~~~~~~~~~~l~~~~--------------~~~i~i~d~~~~~~~~~~~---~----~----------------  185 (327)
                        ...=..+...|+|++|+.+.              +..|..+| .+|+.+..+.   +    .                
T Consensus       189 --~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~  265 (477)
T PF05935_consen  189 --YDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSG  265 (477)
T ss_dssp             --E-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SS
T ss_pred             --cccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCC
Confidence              00023567788998777655              34567777 7777766543   1    0                


Q ss_pred             -----CceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCceeEEeeec
Q psy7482         186 -----SKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       186 -----~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  225 (327)
                           -.+.++.+.+ + .+++++-.-..|...|.++++....+..+
T Consensus       266 ~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~  312 (477)
T PF05935_consen  266 GGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPP  312 (477)
T ss_dssp             TTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-S
T ss_pred             CCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCC
Confidence                 1378899988 4 55666666668999998888887776544

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>KOG2377|consensus

Probab=94.53  E-value=1.6  Score=36.85  Aligned_cols=155  Identities=15%  Similarity=0.178  Sum_probs=88.8

Q ss_pred             EEEEECCCCCeEEEecCCCcEEEEEcCCC--eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeee
Q psy7482          58 TCLKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI  135 (327)
Q Consensus        58 ~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  135 (327)
                      +.+-|. |.+..+.+...|.+.=|-+...  .....+.....+ +|.++.|++|.+.++.--.+.+|.+++....+....
T Consensus        26 ngvFfD-DaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G-~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~  103 (657)
T KOG2377|consen   26 NGVFFD-DANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKG-EIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLE  103 (657)
T ss_pred             cceeec-cCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCC-ceeEEEeccCcceEEEEecCceEEEEecCCCchhhH
Confidence            334444 3333333444455666655432  233334233344 599999999999999999999999999744333222


Q ss_pred             eeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCce-eeEec-CCCceeEEEeecC-ceE--EEeCCCCcEEE
Q psy7482         136 TNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV-LQTLK-SESKVHSVCFLNE-TTV--CTGNEESAITA  210 (327)
Q Consensus       136 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~-~~~~~-~~~~i~~~~~~~~-~~l--~~~~~d~~i~i  210 (327)
                      . ..........|....|+.+ .-+|.-.+..+-+|.....+. ++..+ +...|.-..|.++ ..+  +++-..+.+.=
T Consensus       104 ~-~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnp  181 (657)
T KOG2377|consen  104 Y-TQECKTKNANILGFCWTSS-TEIAFITDQGIEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNP  181 (657)
T ss_pred             H-HHHhccCcceeEEEEEecC-eeEEEEecCCeEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeecccccccccc
Confidence            2 1222223344889999876 455555566666776544332 22223 6677888888888 432  23324444444


Q ss_pred             EEcCCC
Q psy7482         211 YNLTDG  216 (327)
Q Consensus       211 ~d~~~~  216 (327)
                      +-++++
T Consensus       182 f~~~~~  187 (657)
T KOG2377|consen  182 FHFRAG  187 (657)
T ss_pred             EEEeec
Confidence            444443

>KOG1900|consensus

Probab=94.48  E-value=0.98  Score=43.17  Aligned_cols=157  Identities=11%  Similarity=0.122  Sum_probs=89.7

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEE--------ecCCCEEEEEeCCCCEEE
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISI--------HPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~l~~~~~dg~i~i  124 (327)
                      |...-..+-+-|.=.+.. .+-|+.+.+|+.+++.....+ .+.... |..+..        .|.=++++..+.--.|.+
T Consensus        77 ~~~~~~~mGiFpeI~RaW-iTiDn~L~lWny~~~~e~~~~-d~~sht-Il~V~LvkPkpgvFv~~IqhlLvvaT~~ei~i  153 (1311)
T KOG1900|consen   77 NIECKTDMGIFPEIGRAW-ITIDNNLFLWNYESDNELAEY-DGLSHT-ILKVGLVKPKPGVFVPEIQHLLVVATPVEIVI  153 (1311)
T ss_pred             CcceeeeeccchhhcceE-EEeCCeEEEEEcCCCCccccc-cchhhh-heeeeeecCCCCcchhhhheeEEecccceEEE
Confidence            333334455555422222 345778999999987666665 443333 554433        222234444444455666


Q ss_pred             EEcCCCcee----e---eeeccccCccccceEEEEEccCCcEEEeecCCeEEEE--EecCC---ce--------------
Q psy7482         125 WNLVKGRSA----Y---ITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVF--SVEKA---GV--------------  178 (327)
Q Consensus       125 wd~~~~~~~----~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~--d~~~~---~~--------------  178 (327)
                      +-+.-.+..    .   .+.....   .-.|.++....+|+.+.+|.||.++-.  ....+   +.              
T Consensus       154 lgV~~~~~~~~~~~f~~~~~i~~d---g~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~l  230 (1311)
T KOG1900|consen  154 LGVSFDEFTGELSIFNTSFKISVD---GVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSL  230 (1311)
T ss_pred             EEEEeccccCcccccccceeeecC---CceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHh
Confidence            644321111    0   0111111   223889998899999999988855422  22211   10              


Q ss_pred             ----eeEe-cCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCC
Q psy7482         179 ----LQTL-KSESKVHSVCFLNE-TTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       179 ----~~~~-~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~  215 (327)
                          .... .+..+|..++.... +.+.+-++.|+|.+||+..
T Consensus       231 vPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  231 VPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             hhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence                0011 13568999999887 8889999999999999976

>KOG1898|consensus

Probab=94.46  E-value=4.4  Score=38.16  Aligned_cols=110  Identities=12%  Similarity=0.136  Sum_probs=66.6

Q ss_pred             cEEEEEeCCCEEEEecCCCeEEEEEcccccccccc---ccccccEEEEEECCCC------CeEEEecCCCcEEEEEcCCC
Q psy7482          16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGAL---MQHEGTITCLKFTPEG------SHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        16 ~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~---~~~~~~v~~~~~~~~~------~~l~~~~~d~~i~iw~~~~~   86 (327)
                      .|.+.+.+...++.+-++|.+.-+.......+..+   ..-+..|.|+++.++.      ++++.++.|+.+++..+...
T Consensus       541 ~Iv~~avnr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~  620 (1205)
T KOG1898|consen  541 RIVKCAVNRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPS  620 (1205)
T ss_pred             EEEEEeecceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEecCc
Confidence            34444446666666666777666655332222233   2345678899998754      57999999999999999866


Q ss_pred             eEEEeEEecccCCceeeEEEec---CC------CEEEEEeCCCCEEEE
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHP---SG------KLALSVGKDKTLRTW  125 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~---~~------~~l~~~~~dg~i~iw  125 (327)
                      ..+..+....-..++.++.+-+   ++      -+|.+|-.+|.+.-+
T Consensus       621 d~l~~ls~q~l~~~~~s~~iv~~~~~~~~~~~~L~l~~GL~NGvllR~  668 (1205)
T KOG1898|consen  621 DCLQPLSVQGLSSPPESLCIVEMEATGGTDVAQLYLLIGLRNGVLLRF  668 (1205)
T ss_pred             ceEEEccccccCCCccceEEEEecccCCccceeEEEEecccccEEEEE
Confidence            6666653333333355555433   22      145666666655444

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=94.39  E-value=3.3  Score=36.34  Aligned_cols=155  Identities=12%  Similarity=0.114  Sum_probs=75.9

Q ss_pred             CCEEEEe---cCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccC-C
Q psy7482          24 SKLAASS---GADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG-T   99 (327)
Q Consensus        24 ~~~l~~~---~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-~   99 (327)
                      +-++++.   ...+...+.|. +|.....+.........+...++|.+++...  ..+..+|+. |+.+..+...... .
T Consensus       115 gl~~~~~~~~~~~~~~~~iD~-~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~  190 (477)
T PF05935_consen  115 GLYFVNGNDWDSSSYTYLIDN-NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYD  190 (477)
T ss_dssp             -EEEEEETT--BEEEEEEEET-TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-
T ss_pred             cEEEEeCCCCCCCceEEEECC-CccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccc
Confidence            3345555   23455666664 3444433332111111166778898877555  678888885 5555444221110 0


Q ss_pred             ceeeEEEecCCCEEEEEeC-------------CCCEEEEEcCCCceeeeeeccccC----------------------cc
Q psy7482         100 AVNHISIHPSGKLALSVGK-------------DKTLRTWNLVKGRSAYITNLSSYG----------------------VG  144 (327)
Q Consensus       100 ~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~----------------------~~  144 (327)
                      -=..+...|+|++|+.+..             .-.|..+| .+|+.+....+..+-                      ..
T Consensus       191 ~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~D  269 (477)
T PF05935_consen  191 FHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRD  269 (477)
T ss_dssp             B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSB
T ss_pred             cccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCC
Confidence            0134567789998887772             12366666 667666554433220                      00


Q ss_pred             ccceEEEEEcc-CCcEEEeec-CCeEEEEEecCCceeeEec
Q psy7482         145 FENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       145 ~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~~  183 (327)
                      ---++++.+.+ ++.+++++- ...|...|.++++....+.
T Consensus       270 W~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg  310 (477)
T PF05935_consen  270 WLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILG  310 (477)
T ss_dssp             S--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES
T ss_pred             ccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeC
Confidence            01278999988 555555554 5689999988888888776

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=94.37  E-value=3.5  Score=36.53  Aligned_cols=247  Identities=12%  Similarity=0.114  Sum_probs=122.4

Q ss_pred             CCCEEEEecCCCeEEEEEcccccc--ccccccc-cccEEEEEECCCC-CeEEEecCCC--cEEEEEcCCCeEEEeEEecc
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQ--SGALMQH-EGTITCLKFTPEG-SHLISCSDDG--SIAIFRVGSWQLEKLFKKAH   96 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~--~~~~~~~-~~~v~~~~~~~~~-~~l~~~~~d~--~i~iw~~~~~~~~~~~~~~~   96 (327)
                      ++..++-+..+|.+....+.....  ....-+. ....+++.+..++ .+|+.|+.-|  .+.-|.....+.+..+   .
T Consensus       221 ~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~---~  297 (504)
T PF10433_consen  221 DGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSL---P  297 (504)
T ss_dssp             TSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE----
T ss_pred             CCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEec---c
Confidence            567788889999998887765431  1111122 3445666666554 3677776644  4444553333444444   3


Q ss_pred             cCCceeeEEEecC----CC------EEEEEe---CCCCEEEEEcCCCceee--eeeccccCccccceEEEEEcc-CCcEE
Q psy7482          97 KGTAVNHISIHPS----GK------LALSVG---KDKTLRTWNLVKGRSAY--ITNLSSYGVGFENLDSVVWSP-EGLLY  160 (327)
Q Consensus        97 ~~~~v~~~~~~~~----~~------~l~~~~---~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l  160 (327)
                      .-.||..+++.+.    ..      .|++++   .+|.+++..  .|-...  ......... ...++.+.... ++.++
T Consensus       298 N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr--~Gi~~~~~~~~~~~l~~-v~~iW~l~~~~~~~~~l  374 (504)
T PF10433_consen  298 NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILR--NGIGIEGLELASSELPG-VTGIWTLKLSSSDHSYL  374 (504)
T ss_dssp             ---SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEE--ESBEEE--EEEEEEEST-EEEEEEE-SSSSSBSEE
T ss_pred             CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEe--ccCCceeeeeeccCCCC-ceEEEEeeecCCCceEE
Confidence            3334888888532    11      455554   467888874  332222  221211111 12255555443 25677


Q ss_pred             EeecCCeEEEEEec---CCceeeEe-----cCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeec-ccceEE
Q psy7482         161 AIPIQNKAVVFSVE---KAGVLQTL-----KSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKAS-ASRIKG  231 (327)
Q Consensus       161 ~~~~~~~i~i~d~~---~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~  231 (327)
                      +.+....-+++.+.   ..+.+...     ....+-..+....++.++=... ..|++.+....+........ ...|.+
T Consensus       375 v~S~~~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~~~~ivQVt~-~~i~l~~~~~~~~~~~w~~~~~~~I~~  453 (504)
T PF10433_consen  375 VLSFPNETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVGDGRIVQVTP-KGIRLIDLEDGKLTQEWKPPAGSIIVA  453 (504)
T ss_dssp             EEEESSEEEEEEES----SSEEEEE---TS-SSS-EEEEEEETTTEEEEEES-SEEEEEESSSTSEEEEEE-TTS---SE
T ss_pred             EEEcCCceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcCCCeEEEEec-CeEEEEECCCCeEEEEEeCCCCCeEEE
Confidence            77766666666664   23333222     1222222333333444443333 34888888777776665433 334555


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee-c----ccCceEEEeeeC
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK-A----SASRIKGLASHR  280 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~----~~~~v~~~~~~~  280 (327)
                      .+.    ++.+++.+-.++.+..+.+.......... .    ....|.++...|
T Consensus       454 a~~----~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p  503 (504)
T PF10433_consen  454 ASI----NDPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP  503 (504)
T ss_dssp             EEE----SSSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred             EEE----CCCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence            554    45566666668889999887776543322 1    356777777655

...

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=94.33  E-value=1.8  Score=33.74  Aligned_cols=146  Identities=16%  Similarity=0.199  Sum_probs=76.4

Q ss_pred             EEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---CcEEEEEcCC----CeEEEeEE-ecccCCceeeEEEe
Q psy7482          36 VVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGS----WQLEKLFK-KAHKGTAVNHISIH  107 (327)
Q Consensus        36 v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~----~~~~~~~~-~~~~~~~v~~~~~~  107 (327)
                      -.+||+.+++....-.....-+.+-.+.+||++|.+|+..   ..+++++...    ......-. ...... -.....-
T Consensus        48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RW-YpT~~~L  126 (243)
T PF07250_consen   48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRW-YPTATTL  126 (243)
T ss_pred             EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCc-cccceEC
Confidence            4578887765432211222333444577899999998762   3577777643    11111000 011111 2334556


Q ss_pred             cCCCEEEEEeCCCC-EEEEEcCCC-ceeeeeecccc---CccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEe
Q psy7482         108 PSGKLALSVGKDKT-LRTWNLVKG-RSAYITNLSSY---GVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTL  182 (327)
Q Consensus       108 ~~~~~l~~~~~dg~-i~iwd~~~~-~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~  182 (327)
                      +||+.|+.|+.... ..+|..... .......+...   .....---.+...|+|++++.+..+ -.+||..+.+.++.+
T Consensus       127 ~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~-s~i~d~~~n~v~~~l  205 (243)
T PF07250_consen  127 PDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG-SIIYDYKTNTVVRTL  205 (243)
T ss_pred             CCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC-cEEEeCCCCeEEeeC
Confidence            79999999887643 344443211 11111111110   0111123356678899999888754 346688888776666


Q ss_pred             c
Q psy7482         183 K  183 (327)
Q Consensus       183 ~  183 (327)
                      .
T Consensus       206 P  206 (243)
T PF07250_consen  206 P  206 (243)
T ss_pred             C
Confidence            5

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=94.31  E-value=2.2  Score=34.16  Aligned_cols=113  Identities=11%  Similarity=0.214  Sum_probs=68.2

Q ss_pred             CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec------CCCeEEEEEcCCCceeEEeec-----ccCceE
Q psy7482         206 SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN------EESAITAYNLTDGSHLWHIKA-----SASRIK  274 (327)
Q Consensus       206 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~-----~~~~v~  274 (327)
                      ..|++||..+.+-..--.+-.+.|+.+.|.  .+.++++.|.      ....+..||..+..- ..+.+     -.++|.
T Consensus        16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~--~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~s~~ipgpv~   92 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWA--SNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGSSNSIPGPVT   92 (281)
T ss_pred             CEEEEEECCCCEeecCCCCceEEEEEEEEe--cCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcccccCCCcEE
Confidence            458899987765443334456789999995  4566666653      456788999877642 22222     236788


Q ss_pred             EEeeeC----cEEEEEe-cCCcEEEEEccCccCCCceeeee--cCCCCceEEEEeCC
Q psy7482         275 GLASHR----NHLICIT-SAGDLVVWELNEDVTREPQRVSA--TNDGCRFTCLAIRP  324 (327)
Q Consensus       275 ~~~~~~----~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~--~~~~~~i~~l~~~p  324 (327)
                      .+.+..    ++.+.|. .+|.-.+...+..   .+..+..  ...+..|..+.+-|
T Consensus        93 a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs---~W~~i~~~~~~~~t~I~~l~~~~  146 (281)
T PF12768_consen   93 ALTFISNDGSNFWVAGRSANGSTFLMKYDGS---SWSSIGSDILGSGTTIRGLQVLP  146 (281)
T ss_pred             EEEeeccCCceEEEeceecCCCceEEEEcCC---ceEeccccccCCCCEEEEEEEEe
Confidence            887744    5555555 4566555555444   4444443  23345677766544

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=94.07  E-value=2  Score=32.57  Aligned_cols=107  Identities=12%  Similarity=0.172  Sum_probs=64.1

Q ss_pred             CeEEEecCCCcEEEEEcCC--CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC------CEEEE---EcC--CCcee
Q psy7482          67 SHLISCSDDGSIAIFRVGS--WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK------TLRTW---NLV--KGRSA  133 (327)
Q Consensus        67 ~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~iw---d~~--~~~~~  133 (327)
                      +.|+.+.....|.+|++..  .+....+.+  -+. |..+.++..|+++++--.+.      .+++|   +..  ....+
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T--v~~-V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v  105 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFST--VGR-VLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPV  105 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcc--hhh-eeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcE
Confidence            4555556667899999873  344555522  244 99999999999999875432      45554   222  11111


Q ss_pred             eeeecccc-------C-----------ccccceEEEEEccCCcEEEeecCCeEEEEEecCCc
Q psy7482         134 YITNLSSY-------G-----------VGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG  177 (327)
Q Consensus       134 ~~~~~~~~-------~-----------~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~  177 (327)
                      .. ...++       .           .-..++.+++..|-..-|++|.++.+.+|.+....
T Consensus       106 ~v-RiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~~~l~lf~l~~~~  166 (215)
T PF14761_consen  106 RV-RIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCGNKLVLFTLKYQT  166 (215)
T ss_pred             EE-EEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcCCEEEEEEEEEEE
Confidence            11 11110       0           00124678888886667778888999999876443

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=94.04  E-value=0.34  Score=25.63  Aligned_cols=39  Identities=18%  Similarity=0.243  Sum_probs=24.6

Q ss_pred             cCCcEEEeec--CCeEEEEEecCCceeeEecCCCceeEEEe
Q psy7482         155 PEGLLYAIPI--QNKAVVFSVEKAGVLQTLKSESKVHSVCF  193 (327)
Q Consensus       155 ~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~~~~~i~~~~~  193 (327)
                      |+++.+.++.  ++.|.++|..+++.+..+........+++
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence            4566555543  67888888888777777764444444443

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=94.03  E-value=3.3  Score=35.77  Aligned_cols=108  Identities=12%  Similarity=0.126  Sum_probs=60.3

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE--EEeEE---e-cccCCceeeEEEecCC------CEEEEEe-----
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL--EKLFK---K-AHKGTAVNHISIHPSG------KLALSVG-----  117 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~---~-~~~~~~v~~~~~~~~~------~~l~~~~-----  117 (327)
                      ...+.|+|.||+++|++--..|.|++++..++..  ...+.   . ..... ...|+++|+-      .+|+...     
T Consensus        30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~G-Llglal~PdF~~~~~n~~lYvsyt~~~~  108 (454)
T TIGR03606        30 NKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNG-LLGLALHPDFMQEKGNPYVYISYTYKNG  108 (454)
T ss_pred             CCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCc-eeeEEECCCccccCCCcEEEEEEeccCC
Confidence            4568899999998777665569999998655432  21111   1 12344 8999999874      2444432     


Q ss_pred             -----CCCCEEEEEcCCC--ce---eeee-eccccCccccceEEEEEccCCcEEEeecC
Q psy7482         118 -----KDKTLRTWNLVKG--RS---AYIT-NLSSYGVGFENLDSVVWSPEGLLYAIPIQ  165 (327)
Q Consensus       118 -----~dg~i~iwd~~~~--~~---~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  165 (327)
                           ....|.-|.+...  ..   ...+ ..+....|.  -..+.|.|||.++++..|
T Consensus       109 ~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD  165 (454)
T TIGR03606       109 DKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGE  165 (454)
T ss_pred             CCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcC--CceEEECCCCcEEEEECC
Confidence                 1223444554321  11   1111 111112222  557889999987776554

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=94.00  E-value=0.23  Score=41.63  Aligned_cols=172  Identities=11%  Similarity=0.148  Sum_probs=88.5

Q ss_pred             cccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE-eEEecccCC---cee-eEEEecCCCEEEEEeCCCCEEE
Q psy7482          50 LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK-LFKKAHKGT---AVN-HISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        50 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~~---~v~-~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      +......|..+-..|||+.|..-+. ..+.++++.+..... ++.....+.   .|. .+..-..|.-++.++.||-|.-
T Consensus       216 L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQ  294 (733)
T COG4590         216 LSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQ  294 (733)
T ss_pred             cCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceee
Confidence            3344566778889999998877665 578888886543221 110111111   122 1222234566888889999888


Q ss_pred             E-EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEE
Q psy7482         125 W-NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCT  201 (327)
Q Consensus       125 w-d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~  201 (327)
                      | |.+.+................++..+.-..+.+-++.-+ .|++..+.....+.+-.-..-..+.-++++|. .+++ 
T Consensus       295 WFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~Ll-  373 (733)
T COG4590         295 WFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYLL-  373 (733)
T ss_pred             eeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhcCcceeeeCcccchhe-
Confidence            7 444332211110111100001122221111223333333 66666665444433322223345667889998 4444 


Q ss_pred             eCCCCcEEEEEcCCCceeEEee
Q psy7482         202 GNEESAITAYNLTDGSHLWQIK  223 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~~  223 (327)
                      .-..|.++++.+++..+-.++.
T Consensus       374 ~e~~gki~~~~l~Nr~Peisws  395 (733)
T COG4590         374 SEDQGKIRLAQLENRNPEISWS  395 (733)
T ss_pred             eecCCceEEEEecCCCCCccHH
Confidence            4566789999988876654443

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=93.98  E-value=1  Score=40.74  Aligned_cols=103  Identities=10%  Similarity=0.103  Sum_probs=70.0

Q ss_pred             CCCEEEEecCCCeEEEEEcccc-----------c---------cccccccccccEEEEEEC--CCCCeEEEecCCCcEEE
Q psy7482          23 TSKLAASSGADETVVLYDMVKR-----------K---------QSGALMQHEGTITCLKFT--PEGSHLISCSDDGSIAI   80 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~-----------~---------~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~i   80 (327)
                      +...|+.+..||.|.+|..++-           +         +...+. -...++.++++  ...++||+++....|.|
T Consensus       113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTV  191 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTV  191 (717)
T ss_pred             CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEE
Confidence            7788999999999999975321           0         111111 34578999998  77888999988888888


Q ss_pred             EEcCCC--eEEEeEEecccCCceeeEEEecCC---C---EEEEEeCCCCEEEEEc
Q psy7482          81 FRVGSW--QLEKLFKKAHKGTAVNHISIHPSG---K---LALSVGKDKTLRTWNL  127 (327)
Q Consensus        81 w~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~---~---~l~~~~~dg~i~iwd~  127 (327)
                      |-....  +....-...+... |.+++|.++.   .   .+++++-.|.+.+|++
T Consensus       192 Faf~l~~~r~~~~~s~~~~hN-IP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  192 FAFALVDERFYHVPSHQHSHN-IPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEEeccccccccccccccccC-CCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            865432  1111101123344 8899998743   2   7788888999999887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=93.80  E-value=3.3  Score=34.18  Aligned_cols=112  Identities=12%  Similarity=0.109  Sum_probs=56.4

Q ss_pred             EEeCCCEEEEecCCC-----eEEEEEcccccc------ccccccccccEEEEEECCCCCeEEEecC-----CCcEEEEEc
Q psy7482          20 VAATSKLAASSGADE-----TVVLYDMVKRKQ------SGALMQHEGTITCLKFTPEGSHLISCSD-----DGSIAIFRV   83 (327)
Q Consensus        20 ~~~~~~~l~~~~~dg-----~v~~w~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iw~~   83 (327)
                      ++.++.+++.|+.++     .+..+|+.+.+.      +..+....... +++.. +++..+.|+.     ...+..||+
T Consensus        69 ~~~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~-~~~~~-~~~iYv~GG~~~~~~~~~v~~yd~  146 (323)
T TIGR03548        69 VSVENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENG-SACYK-DGTLYVGGGNRNGKPSNKSYLFNL  146 (323)
T ss_pred             EEECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCc-eEEEE-CCEEEEEeCcCCCccCceEEEEcC
Confidence            334777778887643     466777765542      11111111111 22222 4566666664     235888888


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC----CEEEEEcCCCceee
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK----TLRTWNLVKGRSAY  134 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~  134 (327)
                      .+.+-...-....... ........++++.+.|+.++    .+..||+++.+...
T Consensus       147 ~~~~W~~~~~~p~~~r-~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~  200 (323)
T TIGR03548       147 ETQEWFELPDFPGEPR-VQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQK  200 (323)
T ss_pred             CCCCeeECCCCCCCCC-CcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEE
Confidence            7654432210011111 22222334567777777654    35688888766543

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>TIGR03032 conserved hypothetical protein TIGR03032

Probab=93.63  E-value=2.8  Score=33.83  Aligned_cols=117  Identities=14%  Similarity=0.158  Sum_probs=0.0

Q ss_pred             EEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc
Q psy7482          79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL  158 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  158 (327)
                      .++|+.+++.+..=....+++     .|+ ++++.++-+..|.+.-+|.++|+.......+..      ...+.|.  |.
T Consensus       188 ~vidv~s~evl~~GLsmPhSP-----RWh-dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~------~rGL~f~--G~  253 (335)
T TIGR03032       188 CVIDIPSGEVVASGLSMPHSP-----RWY-QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGF------TRGLAFA--GD  253 (335)
T ss_pred             EEEEeCCCCEEEcCccCCcCC-----cEe-CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCC------Cccccee--CC


Q ss_pred             EEEeecCC---------------------eEEEEEecCCceeeEec---CCCceeEEEeecC--ceEEEeCCCCcEE
Q psy7482         159 LYAIPIQN---------------------KAVVFSVEKAGVLQTLK---SESKVHSVCFLNE--TTVCTGNEESAIT  209 (327)
Q Consensus       159 ~l~~~~~~---------------------~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~--~~l~~~~~d~~i~  209 (327)
                      +++++...                     .+.+.|+++|..+..++   .-..+.+++..|+  .-.+.+-.+..|+
T Consensus       254 llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~vidl~tG~vv~~l~feg~v~EifdV~vLPg~r~P~~lg~~~~~i~  330 (335)
T TIGR03032       254 FAFVGLSKLRESRVFGGLPIEERLDALGCGVAVIDLNSGDVVHWLRFEGVIEEIYDVAVLPGVRRPEALGPDDDEIR  330 (335)
T ss_pred             EEEEEeccccCCCCcCCCchhhhhhhhcccEEEEECCCCCEEEEEEeCCceeEEEEEEEecCCCCccccCCCcHHHh

This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=93.01  E-value=0.7  Score=24.37  Aligned_cols=40  Identities=15%  Similarity=0.207  Sum_probs=27.1

Q ss_pred             CCCcEEEEec-CCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482         238 PQETTVCTGN-EESAITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       238 ~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      |++++|+++. .++.|.++|..+++.+..+.... ....++|
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~-~P~~i~~   41 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGG-YPFGVAV   41 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCC-CCceEEe
Confidence            4566665544 57899999999988888777533 3344444

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=92.99  E-value=7.5  Score=35.95  Aligned_cols=28  Identities=18%  Similarity=0.388  Sum_probs=21.5

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      -.|..+.++|+|.+|+..|..| |.|-.+
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~-v~V~~L  112 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRG-VVVLEL  112 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCc-EEEEEe
Confidence            4688899999999999888765 444444

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>PLN02193 nitrile-specifier protein

Probab=92.89  E-value=6.1  Score=34.64  Aligned_cols=192  Identities=11%  Similarity=0.048  Sum_probs=90.5

Q ss_pred             eCCCEEEEecCC-------CeEEEEEccccccccccc-c-ccc--cE-EEEEECCCCCeEEEecCC-----CcEEEEEcC
Q psy7482          22 ATSKLAASSGAD-------ETVVLYDMVKRKQSGALM-Q-HEG--TI-TCLKFTPEGSHLISCSDD-----GSIAIFRVG   84 (327)
Q Consensus        22 ~~~~~l~~~~~d-------g~v~~w~~~~~~~~~~~~-~-~~~--~v-~~~~~~~~~~~l~~~~~d-----~~i~iw~~~   84 (327)
                      .++.+++.|+.+       ..+.+||+.+.+....-. + ...  .. .+++. -++.+.+.|+.+     ..+..+|+.
T Consensus       174 ~~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~-~~~~lYvfGG~~~~~~~ndv~~yD~~  252 (470)
T PLN02193        174 VGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVS-IGSTLYVFGGRDASRQYNGFYSFDTT  252 (470)
T ss_pred             ECCEEEEECCcCCCCCCeeCcEEEEECCCCEEEeCCCCCCCCCCcccceEEEE-ECCEEEEECCCCCCCCCccEEEEECC
Confidence            366777777753       247778877654332110 0 000  01 11221 245566677654     358888988


Q ss_pred             CCeEEEeEEec--ccCCceeeEEEecCCCEEEEEeCCC-----CEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          85 SWQLEKLFKKA--HKGTAVNHISIHPSGKLALSVGKDK-----TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        85 ~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      +.+....-...  .....-.++ ..-++++.+.|+.++     .+..||+.+.+................. .++. -++
T Consensus       253 t~~W~~l~~~~~~P~~R~~h~~-~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~-~~~~-~~g  329 (470)
T PLN02193        253 TNEWKLLTPVEEGPTPRSFHSM-AADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGA-GLEV-VQG  329 (470)
T ss_pred             CCEEEEcCcCCCCCCCccceEE-EEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCc-EEEE-ECC
Confidence            76543321110  111101122 223566666776543     4677888776554322111010001111 1222 246


Q ss_pred             cEEEeec-C----CeEEEEEecCCceeeEec-----CCCceeEEEeecCceEEEeCCC--------------CcEEEEEc
Q psy7482         158 LLYAIPI-Q----NKAVVFSVEKAGVLQTLK-----SESKVHSVCFLNETTVCTGNEE--------------SAITAYNL  213 (327)
Q Consensus       158 ~~l~~~~-~----~~i~i~d~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~~~~~d--------------~~i~i~d~  213 (327)
                      ++++.+. +    ..+.+||+.+.+-...-.     ......+++...+.+++.|+..              ..+.+||+
T Consensus       330 kiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~  409 (470)
T PLN02193        330 KVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDT  409 (470)
T ss_pred             cEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEc
Confidence            6666554 3    568899988765432211     1112223333334667777643              24677777


Q ss_pred             CCCc
Q psy7482         214 TDGS  217 (327)
Q Consensus       214 ~~~~  217 (327)
                      .+.+
T Consensus       410 ~t~~  413 (470)
T PLN02193        410 ETLQ  413 (470)
T ss_pred             CcCE
Confidence            6553

>PLN02153 epithiospecifier protein

Probab=92.88  E-value=4.9  Score=33.48  Aligned_cols=113  Identities=13%  Similarity=0.087  Sum_probs=56.6

Q ss_pred             EEeCCCEEEEecCC-------CeEEEEEccccccccc--ccc-ccc---cEEEEEECCCCCeEEEecCC-----CcEEEE
Q psy7482          20 VAATSKLAASSGAD-------ETVVLYDMVKRKQSGA--LMQ-HEG---TITCLKFTPEGSHLISCSDD-----GSIAIF   81 (327)
Q Consensus        20 ~~~~~~~l~~~~~d-------g~v~~w~~~~~~~~~~--~~~-~~~---~v~~~~~~~~~~~l~~~~~d-----~~i~iw   81 (327)
                      +..++.+++.|+.+       ..+.+||+.+.+-...  ... ...   ....+.+  ++++++.|+.+     ..+.+|
T Consensus        29 ~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~y  106 (341)
T PLN02153         29 AVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSY  106 (341)
T ss_pred             EEECCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEE
Confidence            33477777777763       2577888876543221  110 000   1222222  45666777753     357888


Q ss_pred             EcCCCeEEEeEEecc---cCCceeeEEEecCCCEEEEEeCC-----------CCEEEEEcCCCceee
Q psy7482          82 RVGSWQLEKLFKKAH---KGTAVNHISIHPSGKLALSVGKD-----------KTLRTWNLVKGRSAY  134 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~  134 (327)
                      |..+.+-...-....   ........+..-++++.+.|+.+           ..+.+||..+.+...
T Consensus       107 d~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~  173 (341)
T PLN02153        107 DTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQ  173 (341)
T ss_pred             ECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEee
Confidence            987755432210000   11101112222356666777653           247788888766543

>KOG3616|consensus

Probab=92.79  E-value=1.8  Score=39.14  Aligned_cols=97  Identities=15%  Similarity=0.307  Sum_probs=58.4

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA  133 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  133 (327)
                      ...++++.-+|.++.++.+..||+|++|+....+..+.. . ... |-..+.|...|  |+++..|..+.-|. +.|...
T Consensus        14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~-~-~~~-p~~nlv~tnhg--l~~~tsdrr~la~~-~dgvvq   87 (1636)
T KOG3616|consen   14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKIC-E-EAK-PKENLVFTNHG--LVTATSDRRALAWK-EDGVVQ   87 (1636)
T ss_pred             cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhh-h-hcC-Cccceeeeccc--eEEEeccchhheee-ccCcch
Confidence            455788888999999999999999999998655442222 1 111 13445565444  67777788888886 344433


Q ss_pred             eeeeccccCccccceEEEEEccCCc
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGL  158 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~  158 (327)
                      +.+......  .....++...|..+
T Consensus        88 qqfdyndqs--ekefss~~cdptaq  110 (1636)
T KOG3616|consen   88 QQFDYNDQS--EKEFSSILCDPTAQ  110 (1636)
T ss_pred             hhccccchh--hhhccceecCchhh
Confidence            333332221  12244555555443

>COG4257 Vgb Streptogramin lyase [Defense mechanisms]

Probab=92.70  E-value=4.1  Score=32.18  Aligned_cols=216  Identities=13%  Similarity=0.115  Sum_probs=127.9

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeee
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI  135 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  135 (327)
                      .-..++-.|||..-+++...+.|--.|..+|+....- .+.... ...+..-||+..-++-+.. .|.-.|.++.+.. .
T Consensus        63 ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~yp-Lg~Ga~-Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt-~  138 (353)
T COG4257          63 APFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYP-LGSGAS-PHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVT-R  138 (353)
T ss_pred             CccccccCCCCceEEecCccccceecCCCCCceEEEe-cCCCCC-CceEEECCCCCeeEecCcc-eeEEecCcccceE-E
Confidence            3456778889988888888888888899998876553 444444 7788888988766654332 5666666555432 2


Q ss_pred             eeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec--CCCceeEEEeecCceE-EEeCCCCcEEEEE
Q psy7482         136 TNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNETTV-CTGNEESAITAYN  212 (327)
Q Consensus       136 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l-~~~~~d~~i~i~d  212 (327)
                      +.+... ..........|.+.|++..++..|.---.|... ..+..+.  .......++..|++.+ ++.-.++.|-..|
T Consensus       139 f~lp~~-~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~-~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiarid  216 (353)
T COG4257         139 FPLPLE-HADANLETAVFDPWGNLWFTGQIGAYGRLDPAR-NVISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARID  216 (353)
T ss_pred             eecccc-cCCCcccceeeCCCccEEEeeccccceecCccc-CceeeeccCCCCCCcceEECCCCcEEEEeccccceEEcc
Confidence            333321 123347888999999998887633222222211 1223333  3455678888898544 4444566677777


Q ss_pred             cCCCceeEEee---ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-eeEEeecccCceEEEeeeC
Q psy7482         213 LTDGSHLWQIK---ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-HLWHIKASASRIKGLASHR  280 (327)
Q Consensus       213 ~~~~~~~~~~~---~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~  280 (327)
                      ..++.. ..+.   ........+ ++ +|.|+.-++-...+.+..+|..+.. ..+.+.+....-.++....
T Consensus       217 p~~~~a-ev~p~P~~~~~gsRri-ws-dpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~arpys~rVD~  285 (353)
T COG4257         217 PFAGHA-EVVPQPNALKAGSRRI-WS-DPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKARPYSMRVDR  285 (353)
T ss_pred             cccCCc-ceecCCCccccccccc-cc-CccCcEEEeccCCceeeEeCcccccceeeeCCCCCCCcceeeecc
Confidence            666532 2221   111122222 22 4788888887777888888866544 2334444444444554444

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=92.56  E-value=6  Score=33.70  Aligned_cols=142  Identities=9%  Similarity=0.088  Sum_probs=83.1

Q ss_pred             eEEEEEccCCcEEEeecCCeEEEEEecCCce---eeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCc-----ee
Q psy7482         148 LDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV---LQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGS-----HL  219 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~---~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----~~  219 (327)
                      ...+...+++.+++++..|.+..-+ ..++.   .........+.++.+.+++.++..+..|.+.. ....++     ..
T Consensus       241 f~~v~~~~dG~~~~vg~~G~~~~s~-d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~~-S~d~G~~~~~~~f  318 (398)
T PLN00033        241 FSTVNRSPDGDYVAVSSRGNFYLTW-EPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLYV-SKGTGLTEEDFDF  318 (398)
T ss_pred             eeeEEEcCCCCEEEEECCccEEEec-CCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEEE-ecCCCCcccccce
Confidence            4456677889899998877654322 22332   12233566789999998866666667777543 333343     22


Q ss_pred             EEeee--cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe---ecccCceEEEeeeC-cEEEEEecCCcEE
Q psy7482         220 WQIKA--SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI---KASASRIKGLASHR-NHLICITSAGDLV  293 (327)
Q Consensus       220 ~~~~~--~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~~-~~l~~~~~dg~v~  293 (327)
                      .....  ....+..+.+.  +++..+++ +..|.+.... ..++.-...   ..-....+.+.|.+ +.....+.+|.|.
T Consensus       319 ~~~~~~~~~~~l~~v~~~--~d~~~~a~-G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G~~G~il  394 (398)
T PLN00033        319 EEADIKSRGFGILDVGYR--SKKEAWAA-GGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLGNDGVLL  394 (398)
T ss_pred             eecccCCCCcceEEEEEc--CCCcEEEE-ECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEeCCcEEE
Confidence            22221  12347888883  55555554 4567666553 344432222   22245788999877 6777777888876


Q ss_pred             EE
Q psy7482         294 VW  295 (327)
Q Consensus       294 iw  295 (327)
                      -|
T Consensus       395 ~~  396 (398)
T PLN00033        395 RY  396 (398)
T ss_pred             Ee
Confidence            54

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=92.50  E-value=5.4  Score=33.07  Aligned_cols=231  Identities=15%  Similarity=0.191  Sum_probs=113.3

Q ss_pred             EEEEEe--CCCEEEEecCCCeEEEEEcccccc---ccc----cccccccEEEEEECCC---CCeEEEecC-C--------
Q psy7482          17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQ---SGA----LMQHEGTITCLKFTPE---GSHLISCSD-D--------   75 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~---~~~----~~~~~~~v~~~~~~~~---~~~l~~~~~-d--------   75 (327)
                      -++|+|  +++++++ ...|.|++++ .++..   +..    ..........++++|+   ..+|..... .        
T Consensus         4 P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             EEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             ceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            467888  7777665 5599999999 33332   111    2234567899999994   334433322 1        


Q ss_pred             CcEEEEEcCCC-------eEE-EeEEec--ccCCceeeEEEecCCCEEEEEeCCCC-------------EEEEEcCCCce
Q psy7482          76 GSIAIFRVGSW-------QLE-KLFKKA--HKGTAVNHISIHPSGKLALSVGKDKT-------------LRTWNLVKGRS  132 (327)
Q Consensus        76 ~~i~iw~~~~~-------~~~-~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~~  132 (327)
                      ..|.-|....+       +.+ ..+ ..  .....-..|.|.|||.+.++.+..+.             |.-.+.. ++.
T Consensus        82 ~~v~r~~~~~~~~~~~~~~~l~~~~-p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d-G~~  159 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSEEVLVTGL-PDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPD-GSI  159 (331)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEE-ES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETT-SSB
T ss_pred             eeeEEEeccCCccccccceEEEEEe-CCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEeccc-CcC
Confidence            23444444333       111 111 11  11112567999999977776665332             2222221 110


Q ss_pred             eeeeec--------cccCccccceEEEEEccC-CcEEEeec--CCeEEEEEecCCc------------------------
Q psy7482         133 AYITNL--------SSYGVGFENLDSVVWSPE-GLLYAIPI--QNKAVVFSVEKAG------------------------  177 (327)
Q Consensus       133 ~~~~~~--------~~~~~~~~~v~~~~~~~~-~~~l~~~~--~~~i~i~d~~~~~------------------------  177 (327)
                      ...-+.        .-...+......++|+|. +.++++-.  ++.=.+.-++.+.                        
T Consensus       160 p~dnP~~~~~~~~~~i~A~GlRN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~~  239 (331)
T PF07995_consen  160 PADNPFVGDDGADSEIYAYGLRNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPSC  239 (331)
T ss_dssp             -TTSTTTTSTTSTTTEEEE--SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS-
T ss_pred             CCCCccccCCCceEEEEEeCCCccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccCC
Confidence            000000        000011123678999998 76666532  3222222222211                        


Q ss_pred             -----eeeEecCCCceeEEEeecC--------ceEEEeCCCCcEEEEEcCCCceeEEe----eecccceEEEEEEecCCC
Q psy7482         178 -----VLQTLKSESKVHSVCFLNE--------TTVCTGNEESAITAYNLTDGSHLWQI----KASASRIKGLVFFSIPQE  240 (327)
Q Consensus       178 -----~~~~~~~~~~i~~~~~~~~--------~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~v~~~~~~~s~~~  240 (327)
                           +...+.+...+..+.|.+.        .++++.-..+.|....+.....+...    .....++..+++.  |||
T Consensus       240 ~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~--pDG  317 (331)
T PF07995_consen  240 PGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQG--PDG  317 (331)
T ss_dssp             TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEE--TTS
T ss_pred             CCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEc--CCC
Confidence                 2223344556677777532        34555555678888887655332221    2233478888885  899


Q ss_pred             cEEEEecCCCeEE
Q psy7482         241 TTVCTGNEESAIT  253 (327)
Q Consensus       241 ~~l~~~~~d~~i~  253 (327)
                      .+.++.+.+|.|+
T Consensus       318 ~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  318 ALYVSDDSDGKIY  330 (331)
T ss_dssp             EEEEEE-TTTTEE
T ss_pred             eEEEEECCCCeEe
Confidence            8888877777764

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG1983|consensus

Probab=92.35  E-value=5.7  Score=38.26  Aligned_cols=71  Identities=7%  Similarity=0.071  Sum_probs=41.5

Q ss_pred             CCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         185 ESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       185 ~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      ..++.+..+......+.+...+.+-.|+.........+.......       +.++..++++..||.+..||...++.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~h~Dgs~~fWd~s~g~~  268 (993)
T KOG1983|consen  198 EYESLQVLYYSPTKILIGFNRGLVVIKDRASKYVQSAYLPNGQLE-------SRDGSHFVSYHTDGSYAFWDVSSGKL  268 (993)
T ss_pred             ccccceeeeecCCCcceeeeeeeeeehhcccccchhhcccccccC-------ccCCceEEEEEecCCEEeeecCCCce
Confidence            344444444433344455555666666654433333332211111       27899999999999999999988754

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=92.34  E-value=5.3  Score=36.57  Aligned_cols=92  Identities=14%  Similarity=0.108  Sum_probs=55.0

Q ss_pred             eeEEEecCCCEEEEEeCCC-----CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCC
Q psy7482         102 NHISIHPSGKLALSVGKDK-----TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKA  176 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~  176 (327)
                      ..+.|-|+|..+++-+.||     .+.++..+ |-.-..+...-.  ........+|+-....++++..+.+.+|-..+.
T Consensus       250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErN-GLrHGef~lr~~--~dEk~~~~~wn~~s~vlav~~~n~~~lwttkNy  326 (1243)
T COG5290         250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERN-GLRHGEFDLRVG--CDEKAFLENWNLLSTVLAVAEGNLLKLWTTKNY  326 (1243)
T ss_pred             hccccccCCceeeeeccCCCCCcceEEEEccC-CcccCCccccCC--chhhhhhhhhhHHHHHHHHhhcceEEEEEccce
Confidence            3478999999999987665     35555432 211111111100  112266778887778888888999999976654


Q ss_pred             ceeeEec-CCCceeEEEeecC
Q psy7482         177 GVLQTLK-SESKVHSVCFLNE  196 (327)
Q Consensus       177 ~~~~~~~-~~~~i~~~~~~~~  196 (327)
                      .-.-... .-..+.-+.|+|.
T Consensus       327 hWYLK~e~~ip~~s~vkwhpe  347 (1243)
T COG5290         327 HWYLKVERQIPGISYVKWHPE  347 (1243)
T ss_pred             EEEEEEeecCCCcceeeeccc
Confidence            4322222 3345666788885

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=92.32  E-value=1.5  Score=28.05  Aligned_cols=41  Identities=10%  Similarity=0.137  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482         118 KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus       118 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      .+|.+.-||+.+++......--..      .+.+++++|+..++++.
T Consensus        35 ~~GRll~ydp~t~~~~vl~~~L~f------pNGVals~d~~~vlv~E   75 (89)
T PF03088_consen   35 PTGRLLRYDPSTKETTVLLDGLYF------PNGVALSPDESFVLVAE   75 (89)
T ss_dssp             --EEEEEEETTTTEEEEEEEEESS------EEEEEE-TTSSEEEEEE
T ss_pred             CCcCEEEEECCCCeEEEehhCCCc------cCeEEEcCCCCEEEEEe
Confidence            467899999998876544444334      78999999999888885

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>KOG1900|consensus

Probab=92.15  E-value=8.7  Score=37.28  Aligned_cols=147  Identities=16%  Similarity=0.239  Sum_probs=87.9

Q ss_pred             EEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEe--------ecC-ceEEEeCCCCcEEEEEcCCCc--
Q psy7482         150 SVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCF--------LNE-TTVCTGNEESAITAYNLTDGS--  217 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~--------~~~-~~l~~~~~d~~i~i~d~~~~~--  217 (327)
                      .+-+-|.=.......|+.+.+|+.+++.....+. ....|..+..        -|. .++++-...-.|.++-+.-.+  
T Consensus        83 ~mGiFpeI~RaWiTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~  162 (1311)
T KOG1900|consen   83 DMGIFPEIGRAWITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFT  162 (1311)
T ss_pred             eeccchhhcceEEEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEecccc
Confidence            3444454445555569999999999977666665 3444444433        233 344444444556665432211  


Q ss_pred             --e-----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc----CCC---c-----------------eeEEe
Q psy7482         218 --H-----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL----TDG---S-----------------HLWHI  266 (327)
Q Consensus       218 --~-----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~----~~~---~-----------------~~~~~  266 (327)
                        .     ..++......|.++..  ..+|+.+++|-.+   .+|.+    .++   +                 -+..+
T Consensus       163 ~~~~~f~~~~~i~~dg~~V~~I~~--t~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~  237 (1311)
T KOG1900|consen  163 GELSIFNTSFKISVDGVSVNCITY--TENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSV  237 (1311)
T ss_pred             CcccccccceeeecCCceEEEEEe--ccCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcC
Confidence              1     1122233446777775  3777777776554   34432    111   0                 01122


Q ss_pred             e-cccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482         267 K-ASASRIKGLASHR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       267 ~-~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      . .+.++|..++...  ..+.+-++.|+|++|++....
T Consensus       238 ~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~~G  275 (1311)
T KOG1900|consen  238 PGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGGNG  275 (1311)
T ss_pred             CCCCCCcceeeEeccccceeeeeccCceEEEEEccCCC
Confidence            2 4567999999988  889999999999999998853

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=91.96  E-value=1.4  Score=39.35  Aligned_cols=76  Identities=16%  Similarity=0.278  Sum_probs=46.2

Q ss_pred             CCCCeEEEecCCCcEEEEEcCC----CeEEEeEEec-c-------------------cCCceeeEEEec----CCCEEEE
Q psy7482          64 PEGSHLISCSDDGSIAIFRVGS----WQLEKLFKKA-H-------------------KGTAVNHISIHP----SGKLALS  115 (327)
Q Consensus        64 ~~~~~l~~~~~d~~i~iw~~~~----~~~~~~~~~~-~-------------------~~~~v~~~~~~~----~~~~l~~  115 (327)
                      ++...++.+..||.+.......    +......... +                   .......++++.    +..++++
T Consensus       156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            4667788888999988887654    2221111011 1                   011245556655    6789999


Q ss_pred             EeCCCCEEEEEcCCCceeeeeecc
Q psy7482         116 VGKDKTLRTWNLVKGRSAYITNLS  139 (327)
Q Consensus       116 ~~~dg~i~iwd~~~~~~~~~~~~~  139 (327)
                      .+.|+.+++||+.+++++......
T Consensus       236 l~~D~~LRiW~l~t~~~~~~~~~~  259 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQCLATIDLL  259 (547)
T ss_dssp             EETTSEEEEEETTTTCEEEEEETT
T ss_pred             EeCCCeEEEEECCCCeEEEEeccc
Confidence            999999999999999986665444

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=91.82  E-value=7  Score=32.84  Aligned_cols=197  Identities=13%  Similarity=0.246  Sum_probs=107.2

Q ss_pred             CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec----CCCE--EEEEe-CC---CCEEEEEcCC--Cce
Q psy7482          65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP----SGKL--ALSVG-KD---KTLRTWNLVK--GRS  132 (327)
Q Consensus        65 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--l~~~~-~d---g~i~iwd~~~--~~~  132 (327)
                      ...+++...+++-+.+||+. |+.++.+..+   . ++.+....    +++.  |+.++ .+   ..|++|.+..  +..
T Consensus        67 ~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~G---r-~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L  141 (381)
T PF02333_consen   67 AKSLIIGTDKKGGLYVYDLD-GKELQSLPVG---R-PNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGEL  141 (381)
T ss_dssp             GG-EEEEEETTTEEEEEETT-S-EEEEE-SS-----EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEE
T ss_pred             ccceEEEEeCCCCEEEEcCC-CcEEEeecCC---C-cceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcc
Confidence            34577777888899999997 5555655222   2 44333321    3432  34443 32   4699997753  322


Q ss_pred             eeeeeccc-cCccccceEEEEE--cc-CCcEEEee--cCCeEEEEEec---CC----ceeeEecCCCceeEEEeecC-ce
Q psy7482         133 AYITNLSS-YGVGFENLDSVVW--SP-EGLLYAIP--IQNKAVVFSVE---KA----GVLQTLKSESKVHSVCFLNE-TT  198 (327)
Q Consensus       133 ~~~~~~~~-~~~~~~~v~~~~~--~~-~~~~l~~~--~~~~i~i~d~~---~~----~~~~~~~~~~~i~~~~~~~~-~~  198 (327)
                      ........ .......+..+|+  +| +|.+.+..  .+|.+..|.+.   .+    +.++.+...+.+..+..... +.
T Consensus       142 ~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~  221 (381)
T PF02333_consen  142 TDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGR  221 (381)
T ss_dssp             EE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTE
T ss_pred             eEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCC
Confidence            11111000 0111123556665  44 45554444  37888877764   23    45777777789999999887 89


Q ss_pred             EEEeCCCCcEEEEEcCCC-----ceeEEeee--cccceEEEEEEecCCC-cEEEE-ecCCCeEEEEEcCCC-ceeEEe
Q psy7482         199 VCTGNEESAITAYNLTDG-----SHLWQIKA--SASRIKGLVFFSIPQE-TTVCT-GNEESAITAYNLTDG-SHLWHI  266 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~~-----~~~~~~~~--~~~~v~~~~~~~s~~~-~~l~~-~~~d~~i~i~d~~~~-~~~~~~  266 (327)
                      |..+-++.-|.-|+.+..     +.+....+  ....+..|++....++ .||++ .-.+++..+|+.+.. ..+..+
T Consensus       222 LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~~~~~g~f  299 (381)
T PF02333_consen  222 LYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGPNAYVGSF  299 (381)
T ss_dssp             EEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT--EEEEE
T ss_pred             EEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCCCcccceE
Confidence            999999988888887632     12222222  3456788887643443 34544 445678999997653 334444

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=91.75  E-value=1.4  Score=37.14  Aligned_cols=148  Identities=18%  Similarity=0.134  Sum_probs=86.1

Q ss_pred             CCCEEEEecCCCeEEEEEccccccc-ccc-ccccc----cEE-EEEECCCCCeEEEecCCCcEEEE-EcCCC-e----EE
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQS-GAL-MQHEG----TIT-CLKFTPEGSHLISCSDDGSIAIF-RVGSW-Q----LE   89 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~-~~~-~~~~~----~v~-~~~~~~~~~~l~~~~~d~~i~iw-~~~~~-~----~~   89 (327)
                      ||+.+..-+. .++.++++.+.... +.+ ....+    .|+ .+..-..|..|.+++.||-|.-| |+..+ +    .+
T Consensus       231 dg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdvr~~~~p~l~h~  309 (733)
T COG4590         231 DGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDVRRDGQPHLNHI  309 (733)
T ss_pred             CCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeeeecCCCCcceee
Confidence            8887776554 67888887654321 111 11111    122 12222345668888999999887 44332 1    11


Q ss_pred             EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEE
Q psy7482          90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAV  169 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~  169 (327)
                      +.+ + -...++..+.-..+.+-+++-...|++..+.-...+.+...+.-.      .+.-+++||.+.++++-..|.++
T Consensus       310 R~f-~-l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~~------~~~~~~~Sp~~~~Ll~e~~gki~  381 (733)
T COG4590         310 RNF-K-LAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFERAYQ------APQLVAMSPNQAYLLSEDQGKIR  381 (733)
T ss_pred             ecc-c-cCcccceeeccccccceEEEEcCCCceeeeecccCcceehhhhhc------CcceeeeCcccchheeecCCceE
Confidence            111 1 111124433333345567778888999888765544433222222      26778999999999998899999


Q ss_pred             EEEecCCcee
Q psy7482         170 VFSVEKAGVL  179 (327)
Q Consensus       170 i~d~~~~~~~  179 (327)
                      ++.+++..+.
T Consensus       382 ~~~l~Nr~Pe  391 (733)
T COG4590         382 LAQLENRNPE  391 (733)
T ss_pred             EEEecCCCCC
Confidence            9988775443

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=91.70  E-value=2.1  Score=38.32  Aligned_cols=70  Identities=13%  Similarity=0.095  Sum_probs=44.4

Q ss_pred             CCCEEEEecCCCeEEEEEccc----cccc-----------ccccc-----------ccccEEEEEECC----CCCeEEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVK----RKQS-----------GALMQ-----------HEGTITCLKFTP----EGSHLISC   72 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~----~~~~-----------~~~~~-----------~~~~v~~~~~~~----~~~~l~~~   72 (327)
                      +...++.+..||.+.......    +...           +.+.+           ....+..++.++    +..+|++.
T Consensus       157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl  236 (547)
T PF11715_consen  157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL  236 (547)
T ss_dssp             SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred             CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence            677788888888887777654    1100           01110           123455666666    67899999


Q ss_pred             cCCCcEEEEEcCCCeEEEeE
Q psy7482          73 SDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        73 ~~d~~i~iw~~~~~~~~~~~   92 (327)
                      +.|+.+++||+.+++++...
T Consensus       237 ~~D~~LRiW~l~t~~~~~~~  256 (547)
T PF11715_consen  237 SRDHTLRIWSLETGQCLATI  256 (547)
T ss_dssp             ETTSEEEEEETTTTCEEEEE
T ss_pred             eCCCeEEEEECCCCeEEEEe
Confidence            99999999999999986654

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=91.35  E-value=1.4  Score=32.44  Aligned_cols=29  Identities=24%  Similarity=0.225  Sum_probs=25.5

Q ss_pred             CceEEEeeeC--------cEEEEEecCCcEEEEEccC
Q psy7482         271 SRIKGLASHR--------NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       271 ~~v~~~~~~~--------~~l~~~~~dg~v~iw~~~~  299 (327)
                      ..+.+++|+|        .+|++.+.+|.|.||....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            3789999999        6899999999999999774

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PLN02153 epithiospecifier protein

Probab=91.21  E-value=7.8  Score=32.26  Aligned_cols=193  Identities=11%  Similarity=0.069  Sum_probs=87.2

Q ss_pred             CCCeEEEecCC-------CcEEEEEcCCCeEEEeEEecccCC-ce-eeEEEecCCCEEEEEeCC-----CCEEEEEcCCC
Q psy7482          65 EGSHLISCSDD-------GSIAIFRVGSWQLEKLFKKAHKGT-AV-NHISIHPSGKLALSVGKD-----KTLRTWNLVKG  130 (327)
Q Consensus        65 ~~~~l~~~~~d-------~~i~iw~~~~~~~~~~~~~~~~~~-~v-~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~  130 (327)
                      +++.++.|+.+       ..+.+||+.+.+-...-....... .. ......-++++++.|+.+     ..+.+||+.+.
T Consensus        32 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~  111 (341)
T PLN02153         32 GDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKN  111 (341)
T ss_pred             CCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCCCccCcEEEEECCCC
Confidence            35566666653       357888887755432210111000 00 111112245666777653     35788898876


Q ss_pred             ceeeeeeccccCccccc-eEEEEEccCCcEEEeec-C-----------CeEEEEEecCCceeeEecC-----CCceeEEE
Q psy7482         131 RSAYITNLSSYGVGFEN-LDSVVWSPEGLLYAIPI-Q-----------NKAVVFSVEKAGVLQTLKS-----ESKVHSVC  192 (327)
Q Consensus       131 ~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~-~-----------~~i~i~d~~~~~~~~~~~~-----~~~i~~~~  192 (327)
                      +................ -.+++ .-++++++.|+ +           ..+.+||..+.+-...-..     ...-.+++
T Consensus       112 ~W~~~~~~~~~~~p~~R~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~  190 (341)
T PLN02153        112 EWTFLTKLDEEGGPEARTFHSMA-SDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFA  190 (341)
T ss_pred             EEEEeccCCCCCCCCCceeeEEE-EECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEE
Confidence            55433222110000000 11222 23456666654 2           2467788876543221111     11111233


Q ss_pred             eecCceEEEeCC-------------CCcEEEEEcCCCceeEEee-e--c-ccceEEEEEEecCCCcEEEEecCC------
Q psy7482         193 FLNETTVCTGNE-------------ESAITAYNLTDGSHLWQIK-A--S-ASRIKGLVFFSIPQETTVCTGNEE------  249 (327)
Q Consensus       193 ~~~~~~l~~~~~-------------d~~i~i~d~~~~~~~~~~~-~--~-~~~v~~~~~~~s~~~~~l~~~~~d------  249 (327)
                      ...+.+++.++.             ...+.+||..+.+-...-. +  . .....+++.   .+++.++.|+..      
T Consensus       191 ~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~---~~~~iyv~GG~~~~~~~~  267 (341)
T PLN02153        191 VVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAV---VGKYIIIFGGEVWPDLKG  267 (341)
T ss_pred             EECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEE---ECCEEEEECcccCCcccc
Confidence            333345554432             2468889887654322110 0  1 111222232   467777777752      


Q ss_pred             --------CeEEEEEcCCCc
Q psy7482         250 --------SAITAYNLTDGS  261 (327)
Q Consensus       250 --------~~i~i~d~~~~~  261 (327)
                              +.+..+|+.+.+
T Consensus       268 ~~~~~~~~n~v~~~d~~~~~  287 (341)
T PLN02153        268 HLGPGTLSNEGYALDTETLV  287 (341)
T ss_pred             ccccccccccEEEEEcCccE
Confidence                    257777876553

>KOG1896|consensus

Probab=91.14  E-value=5.4  Score=38.26  Aligned_cols=124  Identities=10%  Similarity=0.123  Sum_probs=69.8

Q ss_pred             eeEEEeeeeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      ++++..++ +.-+++|.+++= +|.++.+-  ...|.||+++....+.-..--.-++.-....-=.++|+.|.--..|.+
T Consensus      1086 ~KlKel~~-eE~KGtVsavceV~G~l~~~~--GqKI~v~~l~r~~~ligVaFiD~~~yv~s~~~vknlIl~gDV~ksisf 1162 (1366)
T KOG1896|consen 1086 NKLKELYI-EEQKGTVSAVCEVRGHLLSSQ--GQKIIVRKLDRDSELIGVAFIDLPLYVHSMKVVKNLILAGDVMKSISF 1162 (1366)
T ss_pred             ceeeeeeh-hhcccceEEEEEeccEEEEcc--CcEEEEEEeccCCcceeeEEeccceeEEehhhhhhheehhhhhhceEE
Confidence            45555555 357788999888 66655433  367999999543322110001111111111222456777766667777


Q ss_pred             EEcCC-CeEEEeEEecccCCceeeEEEecCCC--EEEEEeCCCCEEEEEcC
Q psy7482          81 FRVGS-WQLEKLFKKAHKGTAVNHISIHPSGK--LALSVGKDKTLRTWNLV  128 (327)
Q Consensus        81 w~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iwd~~  128 (327)
                      ..... +..+..+......-.+.++.|--+|.  .++++..++.|+++-..
T Consensus      1163 l~fqeep~rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y~ 1213 (1366)
T KOG1896|consen 1163 LGFQEEPYRLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMYA 1213 (1366)
T ss_pred             EEEccCceEEEEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEeC
Confidence            66543 23333332333333478888887775  56777888999887643

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=91.13  E-value=6.9  Score=31.46  Aligned_cols=115  Identities=10%  Similarity=0.129  Sum_probs=64.4

Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEe------CCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG------KDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      ..|++||..+.+....- .+-.+. |..+.|..+.++++.|.      ....+..||..+........... ..-..++.
T Consensus        16 ~~lC~yd~~~~qW~~~g-~~i~G~-V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s-~~ipgpv~   92 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPG-NGISGT-VTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSS-NSIPGPVT   92 (281)
T ss_pred             CEEEEEECCCCEeecCC-CCceEE-EEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCccc-ccCCCcEE
Confidence            35999999877765554 444455 99999987666666664      34568889987765422221110 11124477


Q ss_pred             EEEEcc-CC-cEEEeec----CCeEEEEEecCCceeeE--ecCCCceeEEEe
Q psy7482         150 SVVWSP-EG-LLYAIPI----QNKAVVFSVEKAGVLQT--LKSESKVHSVCF  193 (327)
Q Consensus       150 ~~~~~~-~~-~~l~~~~----~~~i~i~d~~~~~~~~~--~~~~~~i~~~~~  193 (327)
                      .+.+.. ++ ++.+.|.    +..+..||-.+-..+..  +.....|..+.+
T Consensus        93 a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~  144 (281)
T PF12768_consen   93 ALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQV  144 (281)
T ss_pred             EEEeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEE
Confidence            776643 33 3444442    34566676444333333  223345555544

>KOG4460|consensus

Probab=90.92  E-value=10  Score=33.05  Aligned_cols=138  Identities=18%  Similarity=0.220  Sum_probs=0.0

Q ss_pred             EEe-CCCEEEEecCCCeEEEEEcc------------ccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482          20 VAA-TSKLAASSGADETVVLYDMV------------KRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        20 ~~~-~~~~l~~~~~dg~v~~w~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      |.+ +..+++--+.|..+.+-+++            ..+.+.-...-.-.|..+..++.|..++-.+.+|.+..+=.+.+
T Consensus        56 ~~~~gD~lf~Wd~~ds~Llv~~lR~~~~~~~~~a~~q~q~l~P~~~V~feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rw  135 (741)
T KOG4460|consen   56 VFGLGDELFLWDGEDSSLLVVRLRGPSGGGEEPALSQYQRLLPINPVLFEVYQVLLSPTGSHVALIGIKGLMVMELPKRW  135 (741)
T ss_pred             hcccCCEEEEEecCcceEEEEEeccCCCCcccccccccceeccCCcceEEEEEEEecCCCceEEEecCCeeEEEEchhhc


Q ss_pred             eEEEeEEecccCCceee--------------------EEEecCC---CEEEEEeCCCCEEEEEcCCCceeeeeeccccCc
Q psy7482          87 QLEKLFKKAHKGTAVNH--------------------ISIHPSG---KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV  143 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~--------------------~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  143 (327)
                      -.-..+ ...... |+|                    .+|+|+.   ..|..-+.|..|++||+.....++....+..  
T Consensus       136 G~~s~~-eDgk~~-v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~telylqpgepg--  211 (741)
T KOG4460|consen  136 GKNSEF-EDGKST-VNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTELYLQPGEPG--  211 (741)
T ss_pred             Ccccee-cCCCce-EEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecCcEEEEEecCCcchhhccCCCcC--


Q ss_pred             cccceEEEEEccCCcEEEeecCCeEEE
Q psy7482         144 GFENLDSVVWSPEGLLYAIPIQNKAVV  170 (327)
Q Consensus       144 ~~~~v~~~~~~~~~~~l~~~~~~~i~i  170 (327)
                               -++.+.-+..-+++.+.+
T Consensus       212 ---------RS~tn~Si~sFGe~~~~~  229 (741)
T KOG4460|consen  212 ---------RSPTNVSILSFGEEESLV  229 (741)
T ss_pred             ---------CCCccceeeccCCcceee

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=90.89  E-value=8.7  Score=33.12  Aligned_cols=30  Identities=17%  Similarity=0.220  Sum_probs=23.4

Q ss_pred             CceeEEEeecC-ceEEEeCCCCcEEEEEcCC
Q psy7482         186 SKVHSVCFLNE-TTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       186 ~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~  215 (327)
                      ..|.+++..+. +.+++...+|.|.+|++..
T Consensus       190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~  220 (422)
T PF08801_consen  190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGP  220 (422)
T ss_dssp             --EEEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred             hceeeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence            44888888887 8899999999999999975

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast)

Probab=90.87  E-value=12  Score=33.89  Aligned_cols=206  Identities=15%  Similarity=0.124  Sum_probs=0.0

Q ss_pred             CccEEEEEe-----CCCEEEEe-cCCCeEEEEEcccc------------ccccccccccccEEEEEECCCCCeEEEecCC
Q psy7482          14 TASVRSVAA-----TSKLAASS-GADETVVLYDMVKR------------KQSGALMQHEGTITCLKFTPEGSHLISCSDD   75 (327)
Q Consensus        14 ~~~v~~~~~-----~~~~l~~~-~~dg~v~~w~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d   75 (327)
                      +..|.||..     ..++.+.| .....-++-.+..+            .....-..-.+.|-.+.|.++++.+++...+
T Consensus        71 t~iV~~~dV~~~~~~~~~~~~glt~rKk~~ll~i~~~~~~~~~~~~~~e~~~~~~~kl~~kvv~Ik~~~~~~~I~vvl~n  150 (670)
T PF10395_consen   71 TTIVECCDVLEKSDGKKLYCVGLTERKKFKLLLIERKVGSTEDGTVNSETTNEFELKLDDKVVGIKFSSDGKIIYVVLEN  150 (670)
T ss_pred             CceEEEEEeEecCCCcEEEEEEEeeCCeeEEEEEEccCccccccccCccccceEEEEcccceEEEEEecCCCEEEEEEcC


Q ss_pred             CcEEEEEc---------CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCC--ceeeeeeccccCc
Q psy7482          76 GSIAIFRV---------GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKG--RSAYITNLSSYGV  143 (327)
Q Consensus        76 ~~i~iw~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~--~~~~~~~~~~~~~  143 (327)
                      |.|.+||.         ........- ..+..- |.....-....++++.+. ++.=..|.+-.-  +............
T Consensus       151 G~i~~~d~~~~~l~~~~~l~~~~~~~-v~ys~f-v~~~~~~~~~~~ll~v~~~~~~k~~ykL~~l~~~~~~~~El~s~~~  228 (670)
T PF10395_consen  151 GSIQIYDFSENSLEKVPQLKLKSSIN-VSYSKF-VNDFELENGKDLLLTVSQLSNSKLSYKLISLSNESSSIFELSSTIL  228 (670)
T ss_pred             CcEEEEeccccccccccccccccccc-eehhhh-hcccccccCCceEEEEEEcCCCcEEEEEEEeccCCcceEEeehhee


Q ss_pred             cccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecCC--------CceeEEEeecCceEEEeCCCCcEEEEEcCC
Q psy7482         144 GFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSE--------SKVHSVCFLNETTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       144 ~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~--------~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~  215 (327)
                      .........|.-+...+..-.++.|.+|++...+..+++.-.        ..+.-.+.++++.|++  .++.|++.|+.-
T Consensus       229 e~~~~~~s~f~Y~~G~LY~l~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl~~~s~nRvLLs--~~nkIyLld~~~  306 (670)
T PF10395_consen  229 ENFGLEDSKFCYQFGKLYQLSKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSLKPPSPNRVLLS--VNNKIYLLDLKF  306 (670)
T ss_pred             ccCCcccceEEEeCCEEEEEeCCEEEEEEcCCceEEEEEEechhhccccccceEeecCCCCeEEEE--cCCEEEEEeehh


Q ss_pred             CceeEEee
Q psy7482         216 GSHLWQIK  223 (327)
Q Consensus       216 ~~~~~~~~  223 (327)
                      ...+.++.
T Consensus       307 ~siLse~~  314 (670)
T PF10395_consen  307 ESILSEFE  314 (670)
T ss_pred             hhhhhhhh

It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].

>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2

Probab=90.65  E-value=8.2  Score=31.53  Aligned_cols=233  Identities=9%  Similarity=0.004  Sum_probs=110.3

Q ss_pred             CCCEEEEecCCCeEEEEEccc--cccccccccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCCCeE-----------
Q psy7482          23 TSKLAASSGADETVVLYDMVK--RKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQL-----------   88 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~-----------   88 (327)
                      ++++|+.|..+| +.+.+...  .+..+.+  +...|+++...+..+.|++- +....++.+++..-..           
T Consensus        12 ~~~~lL~GTe~G-ly~~~~~~~~~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~~~   88 (302)
T smart00036       12 DGKWLLVGTEEG-LYVLNISDQPGTLEKLI--GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSARLV   88 (302)
T ss_pred             CCcEEEEEeCCc-eEEEEcccCCCCeEEec--CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCcccc
Confidence            346899999998 55555554  2233322  46689999999877766554 4444599999843221           


Q ss_pred             ---EEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccc----cCccccceEEEEEccC--Cc
Q psy7482          89 ---EKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSS----YGVGFENLDSVVWSPE--GL  158 (327)
Q Consensus        89 ---~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~--~~  158 (327)
                         .......+... .......... ..++.+....+|.++......... .....    ......++..+..+++  ..
T Consensus        89 ~~~~~~~~~~~tkG-c~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f-~~~k~~~~~~~~~~~~~~~~~~~~~~~~~  166 (302)
T smart00036       89 IRKNVLTKIPDTKG-CHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKF-KLFKSKFLFPLISPVPVFVELVSSSFERP  166 (302)
T ss_pred             ccccceEeCCcCCc-eEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhh-hhhcccccccCCCCccceEeeecccccce
Confidence               00011233332 2223333221 233444455677776543321110 00110    0000112333333333  45


Q ss_pred             EEEeecC-CeEEEEEecC--CceeeE-----ec-CC-CceeEEEeecCceEEEeCCCCcEEEEEcCCCcee--EEeeecc
Q psy7482         159 LYAIPIQ-NKAVVFSVEK--AGVLQT-----LK-SE-SKVHSVCFLNETTVCTGNEESAITAYNLTDGSHL--WQIKASA  226 (327)
Q Consensus       159 ~l~~~~~-~~i~i~d~~~--~~~~~~-----~~-~~-~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~  226 (327)
                      .+.+|.+ +...++++..  ......     .. .. .++.... .+++.++.+..+. ..+.|....+..  ..+. -.
T Consensus       167 ~lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~-l~~~e~Llc~~~~-~v~Vn~~G~~~~r~~~l~-w~  243 (302)
T smart00036      167 GICIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQ-VPRDEFLLCYDEF-GVFVNLYGKRRSRNPILH-WE  243 (302)
T ss_pred             EEEEEEcCCCCeEEEEeecccccccccccccccccccCceEEEE-ECCCeEEEEECcE-EEEEeCCCCccccceEEE-cC
Confidence            6666764 2555555533  111110     11 11 2333333 3444444444333 333444320221  1222 23


Q ss_pred             cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec
Q psy7482         227 SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA  268 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  268 (327)
                      ....++++.    ..+++.-. +..|.++++.+++.++++..
T Consensus       244 ~~p~~~~~~----~pyll~~~-~~~ievr~l~~~~l~q~i~~  280 (302)
T smart00036      244 FMPESFAYH----SPYLLAFH-DNGIEIRSIKTGELLQELAD  280 (302)
T ss_pred             CcccEEEEE----CCEEEEEc-CCcEEEEECCCCceEEEEec
Confidence            345667763    35555554 45599999999988877763

Unpublished observations.

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=90.45  E-value=14  Score=34.00  Aligned_cols=98  Identities=12%  Similarity=0.164  Sum_probs=52.3

Q ss_pred             EEEEEccCCcEEEeec-CC-----eEEEEEec---CCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCcee
Q psy7482         149 DSVVWSPEGLLYAIPI-QN-----KAVVFSVE---KAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHL  219 (327)
Q Consensus       149 ~~~~~~~~~~~l~~~~-~~-----~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  219 (327)
                      ..++|-|+|..+++-. ||     .+.++..+   -|+.-............+|.-...+......+.+.+|-..+-.-.
T Consensus       250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~~~n~~~lwttkNyhWY  329 (1243)
T COG5290         250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVAEGNLLKLWTTKNYHWY  329 (1243)
T ss_pred             hccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHhhcceEEEEEccceEEE
Confidence            3588999999888743 33     45555432   222222233445566677765544444556778999987654332


Q ss_pred             EEeeecccceEEEEEEecCCCcEEEEe
Q psy7482         220 WQIKASASRIKGLVFFSIPQETTVCTG  246 (327)
Q Consensus       220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~  246 (327)
                      .+..-.-..+.-+.|+|..+..+++++
T Consensus       330 LK~e~~ip~~s~vkwhpe~~nTl~f~d  356 (1243)
T COG5290         330 LKVERQIPGISYVKWHPEEKNTLLFRD  356 (1243)
T ss_pred             EEEeecCCCcceeeeccccCcEEEEec
Confidence            222222233555667653333344433

>smart00564 PQQ beta-propeller repeat

Probab=89.96  E-value=1  Score=22.21  Aligned_cols=26  Identities=27%  Similarity=0.534  Sum_probs=21.4

Q ss_pred             cEEEEecCCCeEEEEEcCCCceeEEe
Q psy7482         241 TTVCTGNEESAITAYNLTDGSHLWHI  266 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~~~~~~  266 (327)
                      ..++.++.+|.+..+|.++|+.++.+
T Consensus         7 ~~v~~~~~~g~l~a~d~~~G~~~W~~   32 (33)
T smart00564        7 GTVYVGSTDGTLYALDAKTGEILWTY   32 (33)
T ss_pred             CEEEEEcCCCEEEEEEcccCcEEEEc
Confidence            35777888999999999999887764

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=89.94  E-value=1  Score=21.36  Aligned_cols=26  Identities=27%  Similarity=0.399  Sum_probs=22.1

Q ss_pred             CceEEEeeeCcEEEEEecCCcEEEEE
Q psy7482         271 SRIKGLASHRNHLICITSAGDLVVWE  296 (327)
Q Consensus       271 ~~v~~~~~~~~~l~~~~~dg~v~iw~  296 (327)
                      +.|.+++..+.+++.+.+.+.+|+|.
T Consensus         2 E~i~aia~g~~~vavaTS~~~lRifs   27 (27)
T PF12341_consen    2 EEIEAIAAGDSWVAVATSAGYLRIFS   27 (27)
T ss_pred             ceEEEEEccCCEEEEEeCCCeEEecC
Confidence            36788888889999999999999873

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>PF01011 PQQ: PQQ enzyme repeat family

Probab=89.28  E-value=1.5  Score=22.66  Aligned_cols=27  Identities=22%  Similarity=0.521  Sum_probs=22.7

Q ss_pred             eEEEeCCCCcEEEEEcCCCceeEEeee
Q psy7482         198 TVCTGNEESAITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       198 ~l~~~~~d~~i~i~d~~~~~~~~~~~~  224 (327)
                      .+++++.+|.+.-+|.++|+.+..++.
T Consensus         2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~   28 (38)
T PF01011_consen    2 RVYVGTPDGYLYALDAKTGKVLWKFQT   28 (38)
T ss_dssp             EEEEETTTSEEEEEETTTTSEEEEEES
T ss_pred             EEEEeCCCCEEEEEECCCCCEEEeeeC
Confidence            466778999999999999999888764

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>PLN02193 nitrile-specifier protein

Probab=89.28  E-value=15  Score=32.35  Aligned_cols=112  Identities=9%  Similarity=0.067  Sum_probs=57.6

Q ss_pred             eCCCEEEEecCC-----CeEEEEEcccccccc--ccc--cccccEEEEEECCCCCeEEEecCCC-----cEEEEEcCCCe
Q psy7482          22 ATSKLAASSGAD-----ETVVLYDMVKRKQSG--ALM--QHEGTITCLKFTPEGSHLISCSDDG-----SIAIFRVGSWQ   87 (327)
Q Consensus        22 ~~~~~l~~~~~d-----g~v~~w~~~~~~~~~--~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~~~   87 (327)
                      .++.+.+.|+.+     ..+..+|+.+.+...  .+.  .....-.+++. -++++.+.|+.++     .+..||+.+.+
T Consensus       227 ~~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~  305 (470)
T PLN02193        227 IGSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKK  305 (470)
T ss_pred             ECCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCE
Confidence            377777788765     357888887654322  110  00111112222 2456666776543     46778887655


Q ss_pred             EEEeEEec-c-cCCceeeEEEecCCCEEEEEeCC----CCEEEEEcCCCceeee
Q psy7482          88 LEKLFKKA-H-KGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYI  135 (327)
Q Consensus        88 ~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~  135 (327)
                      ....-... . ....-..+. .-+++.++.++.+    ..+.+||+.+.+....
T Consensus       306 W~~~~~~~~~~~~R~~~~~~-~~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~  358 (470)
T PLN02193        306 WFHCSTPGDSFSIRGGAGLE-VVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQV  358 (470)
T ss_pred             EEeCCCCCCCCCCCCCcEEE-EECCcEEEEECCCCCccCceEEEECCCCEEEEe
Confidence            43221000 0 000011122 2256677777655    4588999988766443

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=89.20  E-value=10  Score=30.43  Aligned_cols=230  Identities=9%  Similarity=0.072  Sum_probs=113.3

Q ss_pred             EEEEEeCCCEEEEecCCCeEEEEEccccc---cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482          17 VRSVAATSKLAASSGADETVVLYDMVKRK---QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        17 v~~~~~~~~~l~~~~~dg~v~~w~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      -.++...|++...+..|.-+.+.|+.+..   ....+......-..++.+  |++-..+..|+-+.+-|+........+.
T Consensus       131 aygv~vsGn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~  208 (370)
T COG5276         131 AYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIG  208 (370)
T ss_pred             EEEEEecCCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEE
Confidence            34455588888888755557777876543   223333334444566666  7777788889999999997654333332


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS  172 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d  172 (327)
                      ....+..+.++..+++..+++..  +--+.+-|....+....+...... ....+..+..  .+++..... +..+.+.|
T Consensus       209 ~~n~g~g~~sv~vsdnr~y~vvy--~egvlivd~s~~ssp~~~gsyet~-~p~~~s~v~V--s~~~~Yvadga~gl~~id  283 (370)
T COG5276         209 SYNTGPGTYSVSVSDNRAYLVVY--DEGVLIVDVSGPSSPTVFGSYETS-NPVSISTVPV--SGEYAYVADGAKGLPIID  283 (370)
T ss_pred             EEecCCceEEEEecCCeeEEEEc--ccceEEEecCCCCCceEeeccccC-Ccccccceec--ccceeeeeccccCceeEe
Confidence            22333237888777665555543  344777787766544443322221 1111222222  334433332 44455555


Q ss_pred             ecCCcee---eEecCCC-ceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecC
Q psy7482         173 VEKAGVL---QTLKSES-KVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNE  248 (327)
Q Consensus       173 ~~~~~~~---~~~~~~~-~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~  248 (327)
                      ..+....   ..+...+ .-..+.... +++..+..+ ...+-+....+......+....+.+...+  -+.+.+.+...
T Consensus       284 isnp~spfl~ss~~t~g~~a~gi~ay~-~y~yiadkn-~g~vV~~s~~s~m~~~~g~~ti~~s~~v~--~~~q~~y~~d~  359 (370)
T COG5276         284 ISNPPSPFLSSSLDTAGYQAAGIRAYG-NYNYIADKN-TGAVVDASPPSMMDKRPGRPTIGQSCDVS--VDTQIIYSTDY  359 (370)
T ss_pred             ccCCCCCchhccccCCCccccceEEec-CeeEeccCC-ceEEEeCCChhhcccccCcceEeeecceE--EEeeEEEEeec
Confidence            5432211   1111111 222332222 233333222 33344444333222222222222222222  34456777777


Q ss_pred             CCeEEEEEc
Q psy7482         249 ESAITAYNL  257 (327)
Q Consensus       249 d~~i~i~d~  257 (327)
                      ++.+.+|+.
T Consensus       360 ~~gl~i~~~  368 (370)
T COG5276         360 NGGLSIIEY  368 (370)
T ss_pred             CCCEEEEEe
Confidence            888888874

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=89.18  E-value=10  Score=30.57  Aligned_cols=197  Identities=8%  Similarity=0.013  Sum_probs=108.7

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcC------CCceeeeeecc--ccCccccceEEEEEccCCc-------------E
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLV------KGRSAYITNLS--SYGVGFENLDSVVWSPEGL-------------L  159 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~------~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~-------------~  159 (327)
                      -+.|+++|.+.+-++....+...+||..      ..+.+ ...++  .........+.+.|+....             +
T Consensus        25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L-~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F  103 (336)
T TIGR03118        25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPL-VVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF  103 (336)
T ss_pred             cceeEecCCCCEEEecCCcceEEeecCCcccccCCccce-EEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence            5789999988888887778899999986      12221 22222  1111223366677764322             3


Q ss_pred             EEeecCCeEEEEEecCCce-----eeEec--C-CCceeEEEeecC----ceEEEeCCCCcEEEEEcCCCcee--EEee--
Q psy7482         160 YAIPIQNKAVVFSVEKAGV-----LQTLK--S-ESKVHSVCFLNE----TTVCTGNEESAITAYNLTDGSHL--WQIK--  223 (327)
Q Consensus       160 l~~~~~~~i~i~d~~~~~~-----~~~~~--~-~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~--~~~~--  223 (327)
                      |.++.+|+|.-|...-+..     ...+.  . ..-...+++...    .+.++--..++|.+||-.-.+..  ..+.  
T Consensus       104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP  183 (336)
T TIGR03118       104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDP  183 (336)
T ss_pred             EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCC
Confidence            4444588898887432222     12222  1 222344555422    34455567889999985432211  0011  


Q ss_pred             ---ecccceEEEEE---------Ee-cCCCcEEEEecCCCeEEEEEcCCCceeEEee--cccCceEEEeeeC--------
Q psy7482         224 ---ASASRIKGLVF---------FS-IPQETTVCTGNEESAITAYNLTDGSHLWHIK--ASASRIKGLASHR--------  280 (327)
Q Consensus       224 ---~~~~~v~~~~~---------~~-s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~--------  280 (327)
                         ..-.+ ..+.-         .. .++++.=+.|..-|.|-+||+ +++.++++.  +.-...+.|+..|        
T Consensus       184 ~iPagyAP-FnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~LNaPWG~a~APa~FG~~sg  261 (336)
T TIGR03118       184 ALPAGYAP-FNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGRLNAPWGLAIAPESFGSLSG  261 (336)
T ss_pred             CCCCCCCC-cceEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccCCcccCCceeeeChhhhCCCCC
Confidence               00011 11111         00 122222223344478999995 677777774  2234567787766        


Q ss_pred             cEEEEEecCCcEEEEEccCc
Q psy7482         281 NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 ~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+|+---.||+|..||..++
T Consensus       262 ~lLVGNFGDG~InaFD~~sG  281 (336)
T TIGR03118       262 ALLVGNFGDGTINAYDPQSG  281 (336)
T ss_pred             CeEEeecCCceeEEecCCCC
Confidence            66666667999999999877

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=88.98  E-value=12  Score=31.14  Aligned_cols=188  Identities=15%  Similarity=0.099  Sum_probs=0.0

Q ss_pred             EEEe-CCCEEEEecCC-----------CeEEEEEccccccccccccccccEEEEEEC--CCCCeEEEecCC---------
Q psy7482          19 SVAA-TSKLAASSGAD-----------ETVVLYDMVKRKQSGALMQHEGTITCLKFT--PEGSHLISCSDD---------   75 (327)
Q Consensus        19 ~~~~-~~~~l~~~~~d-----------g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d---------   75 (327)
                      +++. ++++.+.|+.+           ..+..||..+.+-...-..........+..  -+++..+.|+.+         
T Consensus        58 ~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~~~~~~~~~~  137 (346)
T TIGR03547        58 VAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVNKNIFDGYFA  137 (346)
T ss_pred             eEEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcChHHHHHHHh


Q ss_pred             ------------------------------CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC------
Q psy7482          76 ------------------------------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD------  119 (327)
Q Consensus        76 ------------------------------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------  119 (327)
                                                    ..+.+||..+.+-...-....... .......-++++.+.|+.+      
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~t~~W~~~~~~p~~~r-~~~~~~~~~~~iyv~GG~~~~~~~~  216 (346)
T TIGR03547       138 DLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPSTNQWRNLGENPFLGT-AGSAIVHKGNKLLLINGEIKPGLRT  216 (346)
T ss_pred             hHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEECCCCceeECccCCCCcC-CCceEEEECCEEEEEeeeeCCCccc


Q ss_pred             CCEEEEEcCCCceeeeeeccccC----ccccceEEEEEccCCcEEEeecCC-----------------------eEEEEE
Q psy7482         120 KTLRTWNLVKGRSAYITNLSSYG----VGFENLDSVVWSPEGLLYAIPIQN-----------------------KAVVFS  172 (327)
Q Consensus       120 g~i~iwd~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~-----------------------~i~i~d  172 (327)
                      ..+..+++...+...........    .+.......+...++++++.|+..                       .+.+||
T Consensus       217 ~~~~~y~~~~~~~~W~~~~~m~~~r~~~~~~~~~~~a~~~~~~Iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd  296 (346)
T TIGR03547       217 AEVKQYLFTGGKLEWNKLPPLPPPKSSSQEGLAGAFAGISNGVLLVAGGANFPGAQENYKNGKLYAHEGLIKAWSSEVYA  296 (346)
T ss_pred             hheEEEEecCCCceeeecCCCCCCCCCccccccEEeeeEECCEEEEeecCCCCCchhhhhcCCccccCCCCceeEeeEEE


Q ss_pred             ecCCceeeEec--CCCceeEEEeecCceEEEeCCCCc
Q psy7482         173 VEKAGVLQTLK--SESKVHSVCFLNETTVCTGNEESA  207 (327)
Q Consensus       173 ~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~  207 (327)
                      ..+.+-...-.  ....-.++....+.++++|+.+..
T Consensus       297 ~~~~~W~~~~~lp~~~~~~~~~~~~~~iyv~GG~~~~  333 (346)
T TIGR03547       297 LDNGKWSKVGKLPQGLAYGVSVSWNNGVLLIGGENSG  333 (346)
T ss_pred             ecCCcccccCCCCCCceeeEEEEcCCEEEEEeccCCC

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>smart00564 PQQ beta-propeller repeat

Probab=88.92  E-value=1.5  Score=21.54  Aligned_cols=25  Identities=28%  Similarity=0.569  Sum_probs=16.8

Q ss_pred             ceEEEeCCCCcEEEEEcCCCceeEE
Q psy7482         197 TTVCTGNEESAITAYNLTDGSHLWQ  221 (327)
Q Consensus       197 ~~l~~~~~d~~i~i~d~~~~~~~~~  221 (327)
                      +.+++++.+|.+..+|.++++.+.+
T Consensus         7 ~~v~~~~~~g~l~a~d~~~G~~~W~   31 (33)
T smart00564        7 GTVYVGSTDGTLYALDAKTGEILWT   31 (33)
T ss_pred             CEEEEEcCCCEEEEEEcccCcEEEE
Confidence            4566667777777777777766554

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	327
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		9e-13
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		1e-06
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		1e-06
2g99_A	308	Structural Basis For The Specific Recognition Of Me		1e-06
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		1e-06
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		1e-06
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		1e-06
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		1e-06
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		1e-06
2h9l_A	329	Wdr5delta23 Length = 329		1e-06
2gnq_A	336	Structure Of Wdr5 Length = 336		1e-06
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		1e-06
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		2e-06
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		2e-06
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		2e-06
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		5e-05
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		2e-06
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		2e-06
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		2e-06
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		2e-06
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		4e-06
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		5e-06
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		6e-06
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		3e-04
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		6e-06
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		1e-05
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		1e-05
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		2e-05
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		2e-05
1nr0_A	611	Two Seven-Bladed Beta-Propeller Domains Revealed By		9e-04
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-05
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		3e-05
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		3e-05
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		3e-05
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		4e-05
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		4e-05
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		4e-05
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		4e-05
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		4e-05
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		9e-05
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		2e-04
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		2e-04
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		2e-04
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		2e-04
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		2e-04
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		2e-04
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		4e-04
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		5e-04
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		9e-04

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 32/284 (11%)
Query: 4   LTQTFVTHSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQ----HEGTI 57
           L QT   HS  +SVR VA     +  AS+  D+TV L++     ++G L+Q    H  ++
Sbjct: 90  LLQTLTGHS--SSVRGVAFSPDGQTIASASDDKTVKLWN-----RNGQLLQTLTGHSSSV 142
Query: 58  TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG 117
             + F+P+G  + S SDD ++ ++      L+ L   +   ++V  ++  P G+   S  
Sbjct: 143 WGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS---SSVWGVAFSPDGQTIASAS 199
Query: 118 KDKTLRTWNLVKGRSAYITNLSS--YGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEK 175
            DKT++ WN        +T  SS   GV F        SP+G   A    +K V      
Sbjct: 200 DDKTVKLWNRNGQLLQTLTGHSSSVRGVAF--------SPDGQTIASASDDKTVKLWNRN 251
Query: 176 AGVLQTLKS-ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLV 233
             +LQTL    S V+ V F  +  T+ + +++  +  +N  +G  L  +   +S + G+ 
Sbjct: 252 GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVWGVA 310
Query: 234 FFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLA 277
           F   P   T+ + +++  +  +N  +G HL  +   +S + G+A
Sbjct: 311 FS--PDGQTIASASDDKTVKLWN-RNGQHLQTLTGHSSSVWGVA 351

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 100 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 159
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 160 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 218
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 219 DYSKGK 224

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 160
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 161 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 219
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 220 DYSKGK 225

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 97  KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 156
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 157 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 215
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 216 DYSKGK 221

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 160
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 161 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 219
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 220 DYSKGK 225

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 107 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 166
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 167 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 225
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 226 DYSKGK 231

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 13  HTASVRSVAATSK--LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           H+A V  VA ++    A S+  D ++ L+++   +     + H   +  + F+P+   ++
Sbjct: 66  HSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIV 125
Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLV 128
           S   D ++ ++ V    +  L + AH    V+ +   PS    + +S G D  ++ W+L 
Sbjct: 126 SGGRDNALRVWNVKGECMHTLSRGAHT-DWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLA 184
Query: 129 KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNK-AVVFSVEKAGVLQTLKSESK 187
            GR   +T+L  +      + SV  SP+G L A   ++  A ++ + K   L  + + + 
Sbjct: 185 TGR--LVTDLKGH---TNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGEALSEMAAGAP 239
Query: 188 VHSVCF-LNETTVCTGNEESAITAYNLTD 215
           ++ +CF  N   +C   E+  I  ++L +
Sbjct: 240 INQICFSPNRYWMCAATEK-GIRIFDLEN 267

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 107 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 166
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 167 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 225
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 226 DYSKGK 231

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 102 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 161
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 162 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 220
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 221 DYSKGK 226

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 118 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 177
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 178 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 236
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 237 DYSKGK 242

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 125 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 184
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 185 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 243
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 244 DYSKGK 249

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 107 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 166
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 167 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 225
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 226 DYSKGK 231

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 106 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 165
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 166 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 224
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 225 DYSKGK 230

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 123 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 182
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 183 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 242 DYSKGK 247

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 104 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 163
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 164 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 222
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 223 DYSKGK 228

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 13  HTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           H   +  VA  + S L  S+  D+T+ ++D+   K    L  H   + C  F P+ + ++
Sbjct: 67  HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 126
Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
           S S D S+ I+ V + +  K    AH    V+ +  +  G L +S   D   R W+   G
Sbjct: 127 SGSFDESVRIWDVKTGKCLKTL-PAH-SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 184
Query: 131 RS-AYITNLSSYGVGFENLDSVVWSPEG-LLYAIPIQNKAVVFSVEKAGVLQTLKSESKV 188
           +    + +  +  V F     V +SP G  + A  + N   ++   K   L+T       
Sbjct: 185 QCLKTLIDDDNPPVSF-----VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE 239
Query: 189 HSVCFLNETT-----VCTGNEESAITAYNL 213
               F N +      + +G+E++ +  +NL
Sbjct: 240 KYCIFANFSVTGGKWIVSGSEDNLVYIWNL 269

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 104 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 163
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 164 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 222
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 223 DYSKGK 228

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+   K    L  H   ++ + F  +
Sbjct: 104 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRD 163
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 164 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 222
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 223 DYSKGK 228

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 28  ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87
           A+  AD+ V ++D    K      +H   + C  FT + +HL+  +  GS   F +  W 
Sbjct: 680 ATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLAT--GSNDFF-LKLWD 736
Query: 88  L-EKLFKKAHKG--TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG 144
           L +K  +    G   +VNH    P  +L  S   D TLR W++         N+  + + 
Sbjct: 737 LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLS 796
Query: 145 FENLDSVV--------WSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            E+    V        WS +G    +  +NK ++F +  +G+L
Sbjct: 797 SEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL 839

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 28  ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87
           A+  AD+ V ++D    K      +H   + C  FT + +HL+  +  GS   F +  W 
Sbjct: 673 ATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLAT--GSNDFF-LKLWD 729
Query: 88  L-EKLFKKAHKG--TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG 144
           L +K  +    G   +VNH    P  +L  S   D TLR W++         N+  + + 
Sbjct: 730 LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLS 789
Query: 145 FENLDSVV--------WSPEGLLYAIPIQNKAVVFSVEKAGVL 179
            E+    V        WS +G    +  +NK ++F +  +G+L
Sbjct: 790 SEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL 832

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 3   TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVK--RKQSGALMQHEGTITCL 60
           T  + FV H       + +  ++   S+GA+  + L++++   +  S     H   ++C+
Sbjct: 109 TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCV 168
Query: 61  KFTP----------EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110
           +++P             +  S   DG + ++   ++Q+   FK AH+ + VNH+SI P+G
Sbjct: 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFK-AHE-SNVNHLSISPNG 225
Query: 111 KLALSVGKDKTLRTWNLV 128
           K   + GKDK L  W+++
Sbjct: 226 KYIATGGKDKKLLIWDIL 243

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 4   LTQTFVTHSHTASVRSV----AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITC 59
           L Q+F  H H A V  +    + T     S G D+  +++DM   +   A   HE  +  
Sbjct: 188 LLQSF--HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNS 245
Query: 60  LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD 119
           +++ P G    S SDD +  ++ + + +   ++ K       + +    SG+L  +   D
Sbjct: 246 VRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND 305
Query: 120 KTLRTWNLVKGRSAYITNLSSYGVGFEN-LDSVVWSPEGLLY 160
            T+  W+++KG    I        G EN + ++  SP+G  +
Sbjct: 306 YTINVWDVLKGSRVSIL------FGHENRVSTLRVSPDGTAF 341

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 9   VTHSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTP 64
           V +SHT  V+ V    + +L AS+  D+TV LY   +        L  HE T+  L F P
Sbjct: 145 VLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP 204
Query: 65  EGSHLISCSDDGSIAIFR 82
            G  L SCSDD ++ I+R
Sbjct: 205 SGQRLASCSDDRTVRIWR 222

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 60  LKFTPEGSHLISCSDDGSIAIFRV--GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG 117
           L + P G+ L SC  D  I I+     SW  + +  + H+ T V  ++  P G    S  
Sbjct: 22  LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRT-VRKVAWSPCGNYLASAS 80
Query: 118 KDKTLRTWNLVKGRSAYITNLSSYGVGFEN-LDSVVWSPEGLLYAIPIQNKAV-VFSVEK 175
            D T   W   +     +T L     G EN + SV W+P G L A   ++K+V V+ V++
Sbjct: 81  FDATTCIWKKNQDDFECVTTLE----GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+        L  H   ++ + F  +
Sbjct: 104 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRD 163
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D TL+ W
Sbjct: 164 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNTLKLW 222
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 223 DYSKGK 228

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 22/158 (13%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +TF  H     +        L AS   D+TV ++ +  ++    L +H   + C+ + PE
Sbjct: 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPE 287
Query: 66  GSH--------------------LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHIS 105
            S+                    L+S S D +I ++ V +     L         V  + 
Sbjct: 288 SSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC--LMTLVGHDNWVRGVL 345
Query: 106 IHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV 143
            H  GK  LS   DKTLR W+    R     N   + V
Sbjct: 346 FHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 383

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 18/223 (8%)
Query: 5   TQTFVTHSHTASVRSVAAT--SKLAASSGADETVVLYDMV---KRKQSGALMQHEGTITC 59
           T+ FV   HT  V SVA +  ++   S+  D T+ L++ +   K   S     H   ++C
Sbjct: 465 TRRFV--GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 522
Query: 60  LKFTPEGSH--LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG 117
           ++F+P      ++S S D ++ ++ + + +L       H G  V+ +++ P G L  S G
Sbjct: 523 VRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGY-VSTVAVSPDGSLCASGG 580
Query: 118 KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG 177
           KD  +  W+L +G+  Y    +S       + ++ +SP         ++   ++ +E   
Sbjct: 581 KDGVVLLWDLAEGKKLYSLEANSV------IHALCFSPNRYWLCAATEHGIKIWDLESKS 634
Query: 178 VLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLT-DGSHL 219
           +++ LK + K  +    N     T  +    T+ N + DGS L
Sbjct: 635 IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 677

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 13  HTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGAL-------MQHEGTITCLKFT 63
           HT  V SV       L AS+G D T+VLY+ V   ++G         + H G++  L ++
Sbjct: 189 HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS 248
Query: 64  PEGSHLISCSDDGSIAIFRVGSWQLEK 90
           P+G+ + S S D +I I+ V + ++EK
Sbjct: 249 PDGTKIASASADKTIKIWNVATLKVEK 275

>pdb|1NR0|A Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The Structure Of A C. Elegans Homologue Of Yeast Actin Interacting Protein 1 (Aip1). Length = 611

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 36  VVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKK 94
           V L+D      +G L      +  + F P     +IS SDD ++AIF    ++ +  F +
Sbjct: 131 VFLFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE 188
Query: 95  AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG------RSAYITNLSSYGVGFENL 148
             K   V+ +  +P G L  S G D T+  +N V G          + N++  G  F   
Sbjct: 189 HTK--FVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF--- 243
Query: 149 DSVVWSPEGLLYAIPIQNKAV-VFSVEKAGVLQTLKSESKV 188
             + WSP+G   A    +K + +++V    V +T+   +++
Sbjct: 244 -GLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           +T   HS+     +    S L  S   DE+V ++D+        L  H   ++ + F  +
Sbjct: 104 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRD 163
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125
           GS ++S S DG   I+   S Q  K          V+ +   P+GK  L+   D  L+ W
Sbjct: 164 GSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATLDNDLKLW 222
Query: 126 NLVKGR 131
           +  KG+
Sbjct: 223 DYSKGK 228

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 60  LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD 119
           L  +P+     SC  DG+IA++ + +  L + F+    G +   I I   G    + G D
Sbjct: 147 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASC--IDISNDGTKLWTGGLD 204
Query: 120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAV-VFSVEKAGV 178
            T+R+W+L +GR     + +S       + S+ + P G   A+ +++  V V  V K   
Sbjct: 205 NTVRSWDLREGRQLQQHDFTS------QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258
Query: 179 LQTLKSESKVHSVCF--LNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFS 236
            Q    ES V S+ F    +  V TG +++ + A+    G+ ++Q K S+S +   +   
Sbjct: 259 YQLHLHESCVLSLKFAYCGKWFVSTG-KDNLLNAWRTPYGASIFQSKESSSVLSCDISV- 316
Query: 237 IPQETTVCTGNEESAITAYNL 257
              +  + TG+ +   T Y +
Sbjct: 317 --DDKYIVTGSGDKKATVYEV 335

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 11  HSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           HSH  S   +++  + A S   D T+ L+D+     +   + H   +  + F+ +   ++
Sbjct: 62  HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 71  SCSDDGSIAIFR-VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129
           S S D +I ++  +G  +     +   +  +    S + S  + +S G DK ++ WNL  
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 181
Query: 130 GRSAYITNLSSYGVGFEN-LDSVVWSPEGLLYAIPIQN-KAVVFSVEKAGVLQTLKSESK 187
            +      L +  +G    L++V  SP+G L A   ++ +A+++ + +   L TL     
Sbjct: 182 CK------LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI 235
Query: 188 VHSVCF 193
           ++++CF
Sbjct: 236 INALCF 241

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 11  HSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           HSH  S   +++  + A S   D T+ L+D+     +   + H   +  + F+ +   ++
Sbjct: 85  HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 144
Query: 71  SCSDDGSIAIFR-VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129
           S S D +I ++  +G  +     +   +  +    S + S  + +S G DK ++ WNL  
Sbjct: 145 SGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN 204
Query: 130 GRSAYITNLSSYGVGFEN-LDSVVWSPEGLLYAIPIQN-KAVVFSVEKAGVLQTLKSESK 187
            +      L +  +G    L++V  SP+G L A   ++ +A+++ + +   L TL     
Sbjct: 205 CK------LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDI 258
Query: 188 VHSVCF 193
           ++++CF
Sbjct: 259 INALCF 264

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           ++F  HSH     ++ A    A S+  D+T+ L+D+   +     + H+  +  +    +
Sbjct: 59  RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKK 118
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA------LSVGKD 119
            S +IS S D +I ++ +    L  L    H    V+ + + P+ K        +S G D
Sbjct: 119 ASMIISGSRDKTIKVWTIKGQCLATLL--GHNDW-VSQVRVVPNEKADDDSVTIISAGND 175
Query: 120 KTLRTWNL--VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN-KAVVFSVEKA 176
           K ++ WNL   +  + +I + S       N++++  SP+G L A   ++ + +++++   
Sbjct: 176 KMVKAWNLNQFQIEADFIGHNS-------NINTLTASPDGTLIASAGKDGEIMLWNLAAK 228
Query: 177 GVLQTLKSESKVHSVCF 193
             + TL ++ +V S+ F
Sbjct: 229 KAMYTLSAQDEVFSLAF 245

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           ++F  HSH     ++ A    A S+  D+T+ L+D+   +     + H+  +  +    +
Sbjct: 59  RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKK 118
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA------LSVGKD 119
            S +IS S D +I ++ +    L  L    H    V+ + + P+ K        +S G D
Sbjct: 119 ASMIISGSRDKTIKVWTIKGQCLATLL--GHN-DWVSQVRVVPNEKADDDSVTIISAGND 175
Query: 120 KTLRTWNL--VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN-KAVVFSVEKA 176
           K ++ WNL   +  + +I + S       N++++  SP+G L A   ++ + +++++   
Sbjct: 176 KMVKAWNLNQFQIEADFIGHNS-------NINTLTASPDGTLIASAGKDGEIMLWNLAAK 228
Query: 177 GVLQTLKSESKVHSVCF 193
             + TL ++ +V S+ F
Sbjct: 229 KAMYTLSAQDEVFSLAF 245

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           ++F  HSH     ++ A    A S+  D+T+ L+D+   +     + H+  +  +    +
Sbjct: 53  RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKK 112
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA------LSVGKD 119
            S +IS S D +I ++ +    L  L    H    V+ + + P+ K        +S G D
Sbjct: 113 ASMIISGSRDKTIKVWTIKGQCLATLL--GHN-DWVSQVRVVPNEKADDDSVTIISAGND 169
Query: 120 KTLRTWNL--VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN-KAVVFSVEKA 176
           K ++ WNL   +  + +I + S       N++++  SP+G L A   ++ + +++++   
Sbjct: 170 KMVKAWNLNQFQIEADFIGHNS-------NINTLTASPDGTLIASAGKDGEIMLWNLAAK 222
Query: 177 GVLQTLKSESKVHSVCF 193
             + TL ++ +V S+ F
Sbjct: 223 KAMYTLSAQDEVFSLAF 239

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           ++F  HSH     ++ A    A S+  D+T+ L+D+   +     + H+  +  +    +
Sbjct: 59  RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKK 118
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA------LSVGKD 119
            S +IS S D +I ++ +    L  L    H    V+ + + P+ K        +S G D
Sbjct: 119 ASMIISGSRDKTIKVWTIKGQCLATLL--GHN-DWVSQVRVVPNEKADDDSVTIISAGND 175
Query: 120 KTLRTWNL--VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN-KAVVFSVEKA 176
           K ++ WNL   +  + +I + S       N++++  SP+G L A   ++ + +++++   
Sbjct: 176 KMVKAWNLNQFQIEADFIGHNS-------NINTLTASPDGTLIASAGKDGEIMLWNLAAK 228
Query: 177 GVLQTLKSESKVHSVCF 193
             + TL ++ +V S+ F
Sbjct: 229 KAMYTLSAQDEVFSLAF 245

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           ++F  HSH     ++ A    A S+  D+T+ L+D+   +     + H+  +  +    +
Sbjct: 59  RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKK 118
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA------LSVGKD 119
            S +IS S D +I ++ +    L  L    H    V+ + + P+ K        +S G D
Sbjct: 119 ASMIISGSRDKTIKVWTIKGQCLATLL--GHN-DWVSQVRVVPNEKADDDSVTIISAGND 175
Query: 120 KTLRTWNL--VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN-KAVVFSVEKA 176
           K ++ WNL   +  + +I + S       N++++  SP+G L A   ++ + +++++   
Sbjct: 176 KMVKAWNLNQFQIEADFIGHNS-------NINTLTASPDGTLIASAGKDGEIMLWNLAAK 228
Query: 177 GVLQTLKSESKVHSVCF 193
             + TL ++ +V S+ F
Sbjct: 229 KAMYTLSAQDEVFSLAF 245

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 91/197 (46%), Gaps = 19/197 (9%)
Query: 6   QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE 65
           ++F  HSH     ++ A    A S+  D+T+ L+D+   +     + H+  +  +    +
Sbjct: 59  RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKK 118
Query: 66  GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA------LSVGKD 119
            S +IS S D +I ++ +    L  L    H    V+ + + P+ K        +S G D
Sbjct: 119 ASXIISGSRDKTIKVWTIKGQCLATLL--GHN-DWVSQVRVVPNEKADDDSVTIISAGND 175
Query: 120 KTLRTWNL--VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAV-VFSVEKA 176
           K ++ WNL   +  + +I + S       N++++  SP+G L A   ++  + ++++   
Sbjct: 176 KXVKAWNLNQFQIEADFIGHNS-------NINTLTASPDGTLIASAGKDGEIXLWNLAAK 228
Query: 177 GVLQTLKSESKVHSVCF 193
               TL ++ +V S+ F
Sbjct: 229 KAXYTLSAQDEVFSLAF 245

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 13  HTASVRSV--AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           HT  V S+  A  ++L  S   D +  L+D+ +         HE  I  + F P G+   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
           + SDD +  +F + + Q    +   +    +  +S   SG+L L+   D     W+ +K 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 131 RSAYI 135
             A +
Sbjct: 303 DRAGV 307

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 13  HTASVRSV--AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           HT  V S+  A  ++L  S   D +  L+D+ +         HE  I  + F P G+   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
           + SDD +  +F + + Q    +   +    +  +S   SG+L L+   D     W+ +K 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 131 RSAYI 135
             A +
Sbjct: 303 DRAGV 307

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Query: 13  HTASVRSV--AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           HT  V S+  A  ++L  S   D +  L+D+ +         HE  I  + F P G+   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
           + SDD +  +F + + Q    +   +    +  +S   SG+L L+   D     W+ +K 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 131 RSA 133
             A
Sbjct: 303 DRA 305

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Query: 13  HTASVRSV--AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           HT  V S+  A  ++L  S   D +  L+D+ +         HE  I  + F P G+   
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
           + SDD +  +F + + Q    +   +    +  +S   SG+L L+   D     W+ +K 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 131 RSA 133
             A
Sbjct: 303 DRA 305

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 13  HTASVRSV--AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           HT  V S+  A  ++L  S   D +  L+D+ +         HE  I  + F P G+   
Sbjct: 194 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 253
Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
           + SDD +  +F + + Q    +   +    +  +S   SG+L L+   D     W+ +K 
Sbjct: 254 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 313
Query: 131 RSAYI 135
             A +
Sbjct: 314 DRAGV 318

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/215 (20%), Positives = 90/215 (41%), Gaps = 13/215 (6%)
Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           K TL    +   HT SV  +    ++  +  +D TV ++D+   +    L+ H   +  L
Sbjct: 160 KNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHL 219
Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG--TAVNHISIHPSGKLALSVGK 118
           +F      +++CS D SIA++ + S   +   ++   G   AVN +      K  +S   
Sbjct: 220 RFN--NGMMVTCSKDRSIAVWDMAS-PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 274
Query: 119 DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV 178
           D+T++ WN       ++  L+ +  G   L       + L+ +    N   ++ +E    
Sbjct: 275 DRTIKVWN--TSTCEFVRTLNGHKRGIACLQ----YRDRLVVSGSSDNTIRLWDIECGAC 328
Query: 179 LQTLKSESKVHSVCFLNETTVCTGNEESAITAYNL 213
           L+ L+   ++      +   + +G  +  I  ++L
Sbjct: 329 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 363

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 100/239 (41%), Gaps = 34/239 (14%)
Query: 11  HSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           + HT++VR +    K   S   D T+ ++D+   +    LM H   + C+++  +G  ++
Sbjct: 196 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVV 253
Query: 71  SCSDDGSIAIFRVGSWQLE-KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129
           S + D     F V  W  E +      +G      S+   G   +S   D ++R W++  
Sbjct: 254 SGAYD-----FMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVET 308
Query: 130 GRSAY-ITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKV 188
           G   + +T   S   G E  D+++ S           +   ++ ++    LQTL+  +K 
Sbjct: 309 GNCIHTLTGHQSLTSGMELKDNILVSGNA-------DSTVKIWDIKTGQCLQTLQGPNKH 361
Query: 189 HSV--CF-LNETTVCTGNEESAITAYNLTDGSHL---------------WQIKASASRI 229
            S   C   N+  V T +++  +  ++L  G  +               W+I+AS +++
Sbjct: 362 QSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL 420

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 2   YTLTQTFVTHSHTASVRSVAA---TSKLAASSGADETVVLY------DMVKRKQSGALMQ 52
           +TL       +H  ++RSVA    TS LAA S  D TV ++      D        A+++
Sbjct: 46  FTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS-FDSTVSIWAKEESADRTFEMDLLAIIE 104
Query: 53  -HEGTITCLKFTPEGSHLISCSDDGSIAIFRV---GSWQLEKLFKKAHKGTAVNHISIHP 108
            HE  +  + ++ +G +L +CS D S+ I+     G  + E +         V H+  HP
Sbjct: 105 GHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE-EYECISVLQEHSQDVKHVIWHP 163
Query: 109 SGKLALSVGKDKTLRTW 125
           S  L  S   D T+R W
Sbjct: 164 SEALLASSSYDDTVRIW 180

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 9   VTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH 68
           V   H ASVR+V+    +  S   D T++++D+ + K    L  H   I    +  E   
Sbjct: 265 VLRGHXASVRTVSGHGNIVVSGSYDNTLIVWDVAQXKCLYILSGHTDRIYSTIYDHERKR 324
Query: 69  LISCSDDGSIAIFRVGSWQLE--KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW- 125
            IS S D +I I     W LE  +L       TA+  + +  S K  +S   D ++R W 
Sbjct: 325 CISASXDTTIRI-----WDLENGELXYTLQGHTALVGL-LRLSDKFLVSAAADGSIRGWD 378
Query: 126 --NLVKGRSAYITNLSS 140
             +  +  S + TNLS+
Sbjct: 379 ANDYSRKFSYHHTNLSA 395

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	327
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	100.0
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	100.0
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	100.0
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.98
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.97
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.97
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.97
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.97
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.97
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.96
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.96
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.96
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.96
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.96
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.95
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.95
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.95
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.95
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.95
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.95
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.95
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.94
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.94
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.94
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.94
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.93
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.93
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.93
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.93
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.92
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.92
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.92
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.91
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.91
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.91
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.9
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.9
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.89
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.89
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.89
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.88
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.88
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.87
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.87
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.87
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.87
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.86
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.86
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.86
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.86
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.86
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.85
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.85
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.84
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.84
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.84
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.83
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.83
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.83
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.82
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.81
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.81
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.81
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.8
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.8
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.8
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.79
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.78
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.78
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.77
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.77
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.76
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.75
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.74
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.73
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.72
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.71
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.7
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.7
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.68
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.68
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.68
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.67
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.67
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.66
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.65
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.64
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.64
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.63
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.63
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.63
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.63
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.62
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.62
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.61
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.6
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.59
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.59
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.59
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.58
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.57
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.56
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.55
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.52
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.52
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.49
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.48
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.46
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.45
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.42
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.41
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.41
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.41
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.41
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.4
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.4
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.4
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.39
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.38
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.37
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.37
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.36
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	99.34
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.33
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.33
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.33
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.32
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.31
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.31
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.3
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.29
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.27
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.24
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.24
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.23
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.21
3v65_B	386	Low-density lipoprotein receptor-related protein;	99.11
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	99.1
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.07
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.0
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.98
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.96
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.91
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.9
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.88
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.88
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.87
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.86
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.86
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.85
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.84
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.84
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.8
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.79
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.76
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.72
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.7
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.7
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.69
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.67
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.61
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.59
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.56
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.56
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.55
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.52
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.49
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.48
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.48
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.45
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	98.44
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.43
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.39
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.39
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.39
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.38
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	98.37
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	98.36
3ott_A	758	Two-component system sensor histidine kinase; beta	98.35
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	98.3
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	98.29
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.28
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	98.24
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.23
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.18
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	98.15
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	98.09
3ott_A	758	Two-component system sensor histidine kinase; beta	98.09
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.04
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	98.03
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.92
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.89
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.78
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.77
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.76
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.76
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	97.75
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.74
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.7
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.62
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.62
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	97.61
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.6
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	97.52
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.5
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.5
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.49
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.45
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.36
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.28
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.21
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	97.2
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.16
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	97.04
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	96.91
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	96.86
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	96.85
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	96.83
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.41
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	95.88
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	95.79
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	95.68
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	93.42
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	91.85
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	91.81
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	91.35
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	90.79
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	90.28
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	89.63
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	87.89
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	86.46
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	85.37
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	84.89
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	84.34
3mvd_K	423	Regulator of chromosome condensation; protein-DNA	82.96
4fhn_B	1139	Nucleoporin NUP120; protein complex,structural pro	80.02

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.6e-53  Score=359.08  Aligned_cols=282  Identities=18%  Similarity=0.327  Sum_probs=261.6

Q ss_pred             eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      ..+.+|.++|++++|  ++++|++|+.||+|++||+.+++....+.+|...|++++|+|++++|++|+.|++|++||+.+
T Consensus       102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~  181 (410)
T 1vyh_C          102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG  181 (410)
T ss_dssp             CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred             EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence            345689999999999  889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-  164 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  164 (327)
                      ++.+..+ .+|... |.+++|+|++++|++++.|+.|++||++++.....+..+     ...+.++.++|++.++++++ 
T Consensus       182 ~~~~~~~-~~h~~~-V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h-----~~~v~~~~~~~~g~~l~s~s~  254 (410)
T 1vyh_C          182 FECIRTM-HGHDHN-VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH-----REWVRMVRPNQDGTLIASCSN  254 (410)
T ss_dssp             SCEEECC-CCCSSC-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-----SSCEEEEEECTTSSEEEEEET
T ss_pred             CceeEEE-cCCCCC-EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC-----CccEEEEEECCCCCEEEEEcC
Confidence            9998888 888888 999999999999999999999999999999876655432     34599999999999999987 


Q ss_pred             CCeEEEEEecCCceeeEec-CCCceeEEEeecC---------------------ceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482         165 QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE---------------------TTVCTGNEESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~---------------------~~l~~~~~d~~i~i~d~~~~~~~~~~  222 (327)
                      |+.|++||+++++....+. |...|.+++|+|+                     .++++|+.|+.|++||+++++++..+
T Consensus       255 D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~  334 (410)
T 1vyh_C          255 DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL  334 (410)
T ss_dssp             TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence            9999999999999888887 8899999999984                     37999999999999999999999999


Q ss_pred             eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         223 KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       223 ~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      .+|...|.+++|+  |++++|++|+.|+.|++||+.+++++..+.+|...|++++|+|  .+|++|+.||.|++|+++
T Consensus       335 ~~h~~~v~~v~~~--~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          335 VGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             ECCSSCEEEEEEC--SSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred             ECCCCcEEEEEEc--CCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence            9999999999995  8999999999999999999999999999999999999999999  799999999999999863

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.4e-53  Score=343.45  Aligned_cols=281  Identities=14%  Similarity=0.249  Sum_probs=256.9

Q ss_pred             eeccCCccEEEEEe------CCCEEEEecCCCeEEEEEcccccc--ccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           9 VTHSHTASVRSVAA------TSKLAASSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         9 ~~~~h~~~v~~~~~------~~~~l~~~~~dg~v~~w~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      ..++|.+.|.+++|      ++.+|++|+.|++|++||+.+++.  ...+.+|...|.+++|+|++.++++++.|++|++
T Consensus        27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l  106 (321)
T 3ow8_A           27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL  106 (321)
T ss_dssp             ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred             ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence            34589999999999      256899999999999999977653  4568899999999999999999999999999999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY  160 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  160 (327)
                      ||+.+++.+..+ ..+... +.+++|+|++++|++++.||.|++||+++++....+....     ..+.+++|+|++++|
T Consensus       107 Wd~~~~~~~~~~-~~~~~~-~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~-----~~v~~~~~spdg~~l  179 (321)
T 3ow8_A          107 WDLENGKQIKSI-DAGPVD-AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG-----KFILSIAYSPDGKYL  179 (321)
T ss_dssp             EETTTTEEEEEE-ECCTTC-CCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSS-----SCEEEEEECTTSSEE
T ss_pred             EECCCCCEEEEE-eCCCcc-EEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCC-----ceEEEEEECCCCCEE
Confidence            999999998888 667766 9999999999999999999999999999988766554332     349999999999999


Q ss_pred             Eeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEec
Q psy7482         161 AIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSI  237 (327)
Q Consensus       161 ~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s  237 (327)
                      ++++ |+.|++||+++++.+..+. |..+|.+++|+|+ .+|++++.|+.|++||+++++.+..+.+|...|.+++|+  
T Consensus       180 asg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s--  257 (321)
T 3ow8_A          180 ASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--  257 (321)
T ss_dssp             EEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC--
T ss_pred             EEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC--
Confidence            9997 9999999999999999888 8889999999999 789999999999999999999999999999999999995  


Q ss_pred             CCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         238 PQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      |++++|++++.|+.|++||+.+++++..+.+|...|.+++|+|  .+|++++.||.|++||++
T Consensus       258 p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          258 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             CCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            9999999999999999999999999999999999999999999  899999999999999974

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=9.5e-51  Score=334.10  Aligned_cols=281  Identities=14%  Similarity=0.259  Sum_probs=252.5

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      ....+++|.+.|.+++|  ++++|++|+.||+|++||+.+++.+..+..|...|.+++|+|++++|++|+.|+.+++|++
T Consensus        47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~  126 (340)
T 1got_B           47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL  126 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred             hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence            34456799999999999  8999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC----eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE
Q psy7482          84 GSW----QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL  159 (327)
Q Consensus        84 ~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  159 (327)
                      .+.    +....+ .+|... |.++.|++++. +++++.|+.|++||+++++....+..     |...|.+++|+|++++
T Consensus       127 ~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~  198 (340)
T 1got_B          127 KTREGNVRVSREL-AGHTGY-LSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG-----HTGDVMSLSLAPDTRL  198 (340)
T ss_dssp             TTCSBSCEEEEEE-ECCSSC-EEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSE
T ss_pred             ccCCCcceeEEEe-cCCCcc-EEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcC-----CCCceEEEEECCCCCE
Confidence            765    344555 778877 99999998774 88999999999999999887655432     3445999999999999


Q ss_pred             EEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee--cccceEEEEE
Q psy7482         160 YAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA--SASRIKGLVF  234 (327)
Q Consensus       160 l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~  234 (327)
                      +++++ |+.|++||+++++....+. |...|.+++|+|+ .++++++.|+.|++||+++++.+..+..  +...|.+++|
T Consensus       199 l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~  278 (340)
T 1got_B          199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF  278 (340)
T ss_dssp             EEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred             EEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEE
Confidence            99987 9999999999999988887 8889999999999 8899999999999999999888776653  2347999999


Q ss_pred             EecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         235 FSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      +  |++++|++|+.|+.|++||+.+++.+..+.+|..+|.+++|+|  .+|++|+.||.|++||
T Consensus       279 s--~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd  340 (340)
T 1got_B          279 S--KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             C--TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             C--CCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence            4  9999999999999999999999999999999999999999999  7999999999999996

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=5.1e-51  Score=330.54  Aligned_cols=289  Identities=19%  Similarity=0.253  Sum_probs=253.8

Q ss_pred             CeeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcE
Q psy7482           1 KYTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI   78 (327)
Q Consensus         1 ~~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i   78 (327)
                      ++++.++|.  +|.+.|.+++|  ++++|++|+.||+|++||+.+++.+..+..|..+|.+++|+|++++|++|+.|+.|
T Consensus         2 ~l~~~~~~~--~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i   79 (304)
T 2ynn_A            2 KLDIKKTFS--NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI   79 (304)
T ss_dssp             CCCCEEEEE--EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred             cceeEEeec--CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence            345566665  89999999999  89999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CC
Q psy7482          79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EG  157 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~  157 (327)
                      ++||+.+++.+..+ .+|... |.+++|+|++++|++|+.||+|++||++++...... +.   .|...|.+++|+| ++
T Consensus        80 ~vwd~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~-~~---~h~~~v~~v~~~p~~~  153 (304)
T 2ynn_A           80 RVFNYNTGEKVVDF-EAHPDY-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT-FE---GHEHFVMCVAFNPKDP  153 (304)
T ss_dssp             EEEETTTCCEEEEE-ECCSSC-EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEE-EC---CCCSCEEEEEECTTCT
T ss_pred             EEEECCCCcEEEEE-eCCCCc-EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhh-hc---ccCCcEEEEEECCCCC
Confidence            99999999999988 889888 999999999999999999999999999877443221 22   2345699999999 56


Q ss_pred             cEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeec--C-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEE
Q psy7482         158 LLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLN--E-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKG  231 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~--~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~  231 (327)
                      .++++++ |+.|++||++++.....+.  +...+..+.|+|  + .++++++.|+.|++||+++++++.++.+|...|.+
T Consensus       154 ~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~  233 (304)
T 2ynn_A          154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF  233 (304)
T ss_dssp             TEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEE
Confidence            8888887 9999999998887766665  557899999987  4 68999999999999999999999999999999999


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---c-EEEEEecCCcEEEEEccCc
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---N-HLICITSAGDLVVWELNED  300 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~-~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++|+  |++.+|++|+.||.|++||+.+++.+..+..|...+++++|+|   . ++++|+. ..+.+|++...
T Consensus       234 ~~~~--p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~-~g~~~~~~~~~  303 (304)
T 2ynn_A          234 AVFH--PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFD-NGFTVLSLGND  303 (304)
T ss_dssp             EEEC--SSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEET-TEEEEEECC--
T ss_pred             EEEC--CCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecC-CceEEEEeccC
Confidence            9995  8999999999999999999999999999999999999999988   2 5777664 45778877654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.7e-49  Score=323.04  Aligned_cols=285  Identities=19%  Similarity=0.290  Sum_probs=256.1

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      ..+.+.+|.+.|++++|  ++++|++|+.||.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus        15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~   94 (312)
T 4ery_A           15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV   94 (312)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence            34556699999999999  8999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      ++++.+..+ ..|... |.+++|+|++++|++++.||.|++||+++++....+..+     ..++.+++|+|++++++++
T Consensus        95 ~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~  167 (312)
T 4ery_A           95 SSGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-----SDPVSAVHFNRDGSLIVSS  167 (312)
T ss_dssp             TTCCEEEEE-ECCSSC-EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTSSEEEEE
T ss_pred             CCCcEEEEE-cCCCCC-EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC-----CCcEEEEEEcCCCCEEEEE
Confidence            999999888 788887 999999999999999999999999999988876555332     3459999999999999988


Q ss_pred             c-CCeEEEEEecCCceeeEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEE--EEEEec
Q psy7482         164 I-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKG--LVFFSI  237 (327)
Q Consensus       164 ~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~s  237 (327)
                      + |+.|++||+++++.+..+.  +..++..++|+|+ .++++++.|+.|++||+++++.+..+.+|......  ..+. .
T Consensus       168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~  246 (312)
T 4ery_A          168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS-V  246 (312)
T ss_dssp             ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE-C
T ss_pred             eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE-e
Confidence            7 9999999999998887775  5678999999999 88999999999999999999999999888765433  2343 2


Q ss_pred             CCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEe--cCCcEEEEEcc
Q psy7482         238 PQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICIT--SAGDLVVWELN  298 (327)
Q Consensus       238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~--~dg~v~iw~~~  298 (327)
                      +++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|  +++++++  .|+.|++|+.+
T Consensus       247 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d  311 (312)
T 4ery_A          247 TGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD  311 (312)
T ss_dssp             SSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred             CCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence            7889999999999999999999999999999999999999999  8888887  69999999975

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.8e-49  Score=327.98  Aligned_cols=281  Identities=16%  Similarity=0.213  Sum_probs=250.5

Q ss_pred             eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC
Q psy7482           7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG   84 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~   84 (327)
                      ...+.||.+.|++++|  ++++|++|+.||+|++||..+++....+..|...|.+++|+|++.+|++|+.|+.+++|++.
T Consensus        57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~  136 (354)
T 2pbi_B           57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT  136 (354)
T ss_dssp             EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred             EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence            3455699999999999  89999999999999999999998888888899999999999999999999999999999986


Q ss_pred             CC------eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc--C
Q psy7482          85 SW------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP--E  156 (327)
Q Consensus        85 ~~------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~  156 (327)
                      ..      .....+ ..|... |.++.|+|++..|++++.|++|++||+++++....+..+     ...+.+++|+|  +
T Consensus       137 ~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~  209 (354)
T 2pbi_B          137 FDKNENMAAKKKSV-AMHTNY-LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH-----GADVLCLDLAPSET  209 (354)
T ss_dssp             CCTTCCSGGGCEEE-EECSSC-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-----SSCEEEEEECCCSS
T ss_pred             ccccccccccceee-eccCCc-EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC-----CCCeEEEEEEeCCC
Confidence            43      233445 678777 999999999999999999999999999999876665433     34499999987  4


Q ss_pred             CcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeec--ccceEE
Q psy7482         157 GLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKAS--ASRIKG  231 (327)
Q Consensus       157 ~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~  231 (327)
                      ++++++++ |+.|++||+++++.+..+. |...|.+++|+|+ .++++++.|+.|++||++.++.+..+..+  ...+.+
T Consensus       210 g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~  289 (354)
T 2pbi_B          210 GNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASS  289 (354)
T ss_dssp             CCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeE
Confidence            67888887 9999999999999998887 8899999999998 89999999999999999988877666543  346889


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      ++|+  |++++|++|+.|+.|++||+.+++.+..+.+|...|++++|+|  ++|++|+.||.|++|+
T Consensus       290 ~~~s--~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          290 VDFS--LSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             EEEC--TTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred             EEEe--CCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence            9994  9999999999999999999999999999999999999999999  8999999999999996

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1.3e-49  Score=351.57  Aligned_cols=312  Identities=14%  Similarity=0.218  Sum_probs=260.0

Q ss_pred             eeccCCccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           9 VTHSHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      .+.+|...|.+++|  ++. .|++|+.|++|++||..+++....+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus       142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~  221 (611)
T 1nr0_A          142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD  221 (611)
T ss_dssp             CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC
Confidence            34689999999999  555 699999999999999999998899999999999999999999999999999999999999


Q ss_pred             CeEEEeEEe------cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc--------------------
Q psy7482          86 WQLEKLFKK------AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS--------------------  139 (327)
Q Consensus        86 ~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------------  139 (327)
                      ++....+..      +|.+. |.+++|+|++++|++++.|++|++||+++++....+...                    
T Consensus       222 g~~~~~~~~~~~~~~~h~~~-V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~  300 (611)
T 1nr0_A          222 GTKTGVFEDDSLKNVAHSGS-VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI  300 (611)
T ss_dssp             CCEEEECBCTTSSSCSSSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEE
T ss_pred             CcEeeeeccccccccccCCC-EEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEE
Confidence            988877732      67777 999999999999999999999999999988765544321                    


Q ss_pred             ------------------ccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe------------------
Q psy7482         140 ------------------SYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL------------------  182 (327)
Q Consensus       140 ------------------~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~------------------  182 (327)
                                        ....|...|.+++|+|++++|++++ |+.|++||+.+++....+                  
T Consensus       301 s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~  380 (611)
T 1nr0_A          301 SANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD  380 (611)
T ss_dssp             ETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC
T ss_pred             eCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCc
Confidence                              1124566799999999999999997 999999998765432211                  


Q ss_pred             -----------------------------------------------------------------cCCCceeEEEeecC-
Q psy7482         183 -----------------------------------------------------------------KSESKVHSVCFLNE-  196 (327)
Q Consensus       183 -----------------------------------------------------------------~~~~~i~~~~~~~~-  196 (327)
                                                                                       .+...+.+++|+|+ 
T Consensus       381 l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg  460 (611)
T 1nr0_A          381 LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDK  460 (611)
T ss_dssp             EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTS
T ss_pred             EEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCC
Confidence                                                                             11234678999999 


Q ss_pred             ceEEEeCCCCcEEEEEcCCCce--eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC-CceeEE--eecccC
Q psy7482         197 TTVCTGNEESAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD-GSHLWH--IKASAS  271 (327)
Q Consensus       197 ~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~--~~~~~~  271 (327)
                      .++++|+.|+.|++||+..+..  +.. .+|...|++++|  +|+|++|++++.|+.|++||+.+ ++.+..  +..|..
T Consensus       461 ~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~f--spdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~  537 (611)
T 1nr0_A          461 QFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAF--SNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTA  537 (611)
T ss_dssp             CEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEE--CTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSS
T ss_pred             CEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEE--CCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeeccc
Confidence            7899999999999999987643  233 679999999999  49999999999999999999987 555443  345999


Q ss_pred             ceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCC-CCceEEEEeCCCC
Q psy7482         272 RIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATND-GCRFTCLAIRPPV  326 (327)
Q Consensus       272 ~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~i~~l~~~p~~  326 (327)
                      .|.+++|+|  ++|++++.|++|++|++..+.  .........| ...|++++|+|+.
T Consensus       538 ~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~--~~~~~~~~~h~~~~v~~v~fs~d~  593 (611)
T 1nr0_A          538 KVACVSWSPDNVRLATGSLDNSVIVWNMNKPS--DHPIIIKGAHAMSSVNSVIWLNET  593 (611)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTCTT--SCCEEETTSSTTSCEEEEEEEETT
T ss_pred             ceeEEEECCCCCEEEEEECCCcEEEEECCCcc--cccchhhccCcccCeeEEEEcCCC
Confidence            999999999  899999999999999998762  1221223346 6789999999974

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=2.8e-50  Score=336.17  Aligned_cols=289  Identities=14%  Similarity=0.251  Sum_probs=253.4

Q ss_pred             eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      ..+.||.+.|++++|  ++++|++|+.||+|++||+.+++....+..|...|.+++|+|++++|++|+.|+.+++||+.+
T Consensus        60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~  139 (380)
T 3iz6_a           60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSS  139 (380)
T ss_dssp             EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCC
T ss_pred             ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCC
Confidence            345699999999999  899999999999999999999999999999999999999999999999999999999999865


Q ss_pred             Ce-------EEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-C
Q psy7482          86 WQ-------LEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-E  156 (327)
Q Consensus        86 ~~-------~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~  156 (327)
                      ..       ....+ .+|.+. |.++.|.|+ +..|++|+.|++|++||+++++....+.......|...+.+++|+| +
T Consensus       140 ~~~~~~~~~~~~~~-~gh~~~-v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  217 (380)
T 3iz6_a          140 QADRDGNMPVSRVL-TGHKGY-ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN  217 (380)
T ss_dssp             CSSCCCSSTTCCBC-CCCSSC-CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred             CccccCCccceeec-cCCCcc-eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence            32       22344 678877 999999996 4579999999999999999998876664444445567799999987 7


Q ss_pred             CcEEEeec-CCeEEEEEec-CCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeeccc-----
Q psy7482         157 GLLYAIPI-QNKAVVFSVE-KAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASAS-----  227 (327)
Q Consensus       157 ~~~l~~~~-~~~i~i~d~~-~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----  227 (327)
                      +.++++|+ |+.|++||++ .++.+..+. |...|.+++|+|+ .++++++.|++|++||+++++.+..+..+..     
T Consensus       218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~  297 (380)
T 3iz6_a          218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNE  297 (380)
T ss_dssp             CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCS
T ss_pred             CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccc
Confidence            88888887 9999999998 456667776 8899999999999 7899999999999999999988877755432     


Q ss_pred             --ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe----ecccCceEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482         228 --RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI----KASASRIKGLASHR--NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       228 --~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~  299 (327)
                        .+.+++|+  |+|++|++|+.||.|++||+..++.+..+    .+|.+.|.+++|+|  .+|++|+.||.|++|++..
T Consensus       298 ~~~v~~~~~s--~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~  375 (380)
T 3iz6_a          298 LPIVTSVAFS--ISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG  375 (380)
T ss_dssp             SCSCSEEEEC--SSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred             cCceEEEEEC--CCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence              48899994  99999999999999999999999888777    68999999999999  8999999999999999987


Q ss_pred             c
Q psy7482         300 D  300 (327)
Q Consensus       300 ~  300 (327)
                      .
T Consensus       376 ~  376 (380)
T 3iz6_a          376 H  376 (380)
T ss_dssp             S
T ss_pred             C
Confidence            5

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=3e-49  Score=324.50  Aligned_cols=280  Identities=14%  Similarity=0.168  Sum_probs=232.5

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc-----------ccccccccccccEEEEEECCCCCeEEEecCCCc
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR-----------KQSGALMQHEGTITCLKFTPEGSHLISCSDDGS   77 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~   77 (327)
                      ..|...|.+++|  ||++|++++ |+++++||....           ........+...|.+++|+|++ .|++|+.||+
T Consensus        27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~  104 (344)
T 4gqb_B           27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA  104 (344)
T ss_dssp             SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred             ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence            357888999999  899999887 778888874311           1111222366789999999985 6889999999


Q ss_pred             EEEEEcCCCeEEEeE---EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc
Q psy7482          78 IAIFRVGSWQLEKLF---KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS  154 (327)
Q Consensus        78 i~iw~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  154 (327)
                      |++||+++++....+   ..+|.+. |.+++|+|++++|++|+.||.|++||+++++.+..+..     |...|.+++|+
T Consensus       105 v~lWd~~~~~~~~~~~~~~~~H~~~-V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-----h~~~V~~~~~~  178 (344)
T 4gqb_B          105 VELWELDENETLIVSKFCKYEHDDI-VSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-----HAAQVTCVAAS  178 (344)
T ss_dssp             EEEEEECTTSSCEEEEEEEECCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEEC
T ss_pred             EEEEeccCCCceeEeeccccCCCCC-EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-----cCCceEEEEec
Confidence            999999988755433   2467777 99999999999999999999999999999987665533     34569999999


Q ss_pred             cCCc-EEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeeccc
Q psy7482         155 PEGL-LYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASAS  227 (327)
Q Consensus       155 ~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  227 (327)
                      |++. ++++++ |+.|++||+++++....+.   +...+.+++|+|+  .++++|+.||.|++||+++++++.++.+|..
T Consensus       179 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~  258 (344)
T 4gqb_B          179 PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ  258 (344)
T ss_dssp             SSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS
T ss_pred             CCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC
Confidence            9884 677776 9999999999999888775   4567999999996  5788999999999999999999999999999


Q ss_pred             ceEEEEEEecCCC-cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCcc
Q psy7482         228 RIKGLVFFSIPQE-TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       228 ~v~~~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      .|++++|+  |++ ++|++|+.|+.|++||+.+++.+ .+.+|.+.|++++|+|   .+|++++.||+|++|++....
T Consensus       259 ~v~~v~fs--p~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~  333 (344)
T 4gqb_B          259 CVTGLVFS--PHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP  333 (344)
T ss_dssp             CEEEEEEC--SSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred             CEEEEEEc--cCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence            99999995  887 57999999999999999888754 5789999999999998   578899999999999998773

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=5.3e-48  Score=314.86  Aligned_cols=283  Identities=16%  Similarity=0.240  Sum_probs=243.6

Q ss_pred             EeeeeccCCccEEEEEe---CCCEEEEecCCCeEEEEEcccc-----ccccccccccccEEEEEECCCCCeEEEecCCCc
Q psy7482           6 QTFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-----KQSGALMQHEGTITCLKFTPEGSHLISCSDDGS   77 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~   77 (327)
                      ..-.+.||.+.|.+++|   ++++|++|+.|++|++|++...     .++..+.+|...|.+++|+|++++|++|+.|++
T Consensus         9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~   88 (319)
T 3frx_A            9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT   88 (319)
T ss_dssp             EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence            33455699999999999   3479999999999999998643     456778899999999999999999999999999


Q ss_pred             EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      |++||+.+++....+ .+|... |.+++|+|++.+|++++.|+.|++||++. +....+.     .|...+.++.|.|..
T Consensus        89 v~~wd~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~-----~h~~~v~~~~~~~~~  160 (319)
T 3frx_A           89 LRLWDVATGETYQRF-VGHKSD-VMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLL-----GHNDWVSQVRVVPNE  160 (319)
T ss_dssp             EEEEETTTTEEEEEE-ECCSSC-EEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEEC-----CCSSCEEEEEECCC-
T ss_pred             EEEEECCCCCeeEEE-ccCCCc-EEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEe-----ccCCcEEEEEEccCC
Confidence            999999999999988 888888 99999999999999999999999999964 3333222     234559999999854


Q ss_pred             ------cEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccc
Q psy7482         158 ------LLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASR  228 (327)
Q Consensus       158 ------~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  228 (327)
                            ..+++++ |+.|++||+++.+....+. |...|.+++|+|+ .+|++++.||.|++||+.+++.+..+..+ .+
T Consensus       161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~  239 (319)
T 3frx_A          161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DE  239 (319)
T ss_dssp             -----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SC
T ss_pred             CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-Cc
Confidence                  4677776 9999999999998888776 8899999999999 78999999999999999999998888754 57


Q ss_pred             eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee--------cccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         229 IKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK--------ASASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       229 v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      +.+++|+  |++.++++++.+ .+++|++..+..+..+.        .|...+.+++|+|  ++|++|+.||.|++||+.
T Consensus       240 v~~~~~s--p~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~  316 (319)
T 3frx_A          240 VFSLAFS--PNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM  316 (319)
T ss_dssp             EEEEEEC--SSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred             EEEEEEc--CCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence            9999995  899999988754 59999998877766654        3456789999999  899999999999999997


Q ss_pred             Cc
Q psy7482         299 ED  300 (327)
Q Consensus       299 ~~  300 (327)
                      +.
T Consensus       317 t~  318 (319)
T 3frx_A          317 TA  318 (319)
T ss_dssp             EC
T ss_pred             ec
Confidence            64

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.5e-48  Score=320.17  Aligned_cols=290  Identities=17%  Similarity=0.270  Sum_probs=238.9

Q ss_pred             eEEEeeeeccCCc-cEEEEEe--CCCEEEEecCCCeEEEEEccccccc---cccccccccEEEEEECCCCCeEEEecCCC
Q psy7482           3 TLTQTFVTHSHTA-SVRSVAA--TSKLAASSGADETVVLYDMVKRKQS---GALMQHEGTITCLKFTPEGSHLISCSDDG   76 (327)
Q Consensus         3 ~~~~~~~~~~h~~-~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~   76 (327)
                      ++.+.  +.+|.+ .|.+++|  ++++||+|+.|++|+|||+.+++..   ....+|...|.+++|+|++++|++|+.|+
T Consensus         6 ~~~~~--~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~   83 (345)
T 3fm0_A            6 VLLGR--VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA   83 (345)
T ss_dssp             EEEEE--ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEeee--ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC
Confidence            34444  448988 9999999  8999999999999999999877533   22367999999999999999999999999


Q ss_pred             cEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc
Q psy7482          77 SIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS  154 (327)
Q Consensus        77 ~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  154 (327)
                      .+++|++..+.  ....+ .+|... |.+++|+|++++|++++.|+.|++||++++........  ...|...|.+++|+
T Consensus        84 ~v~iw~~~~~~~~~~~~~-~~h~~~-v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--~~~h~~~v~~~~~~  159 (345)
T 3fm0_A           84 TTCIWKKNQDDFECVTTL-EGHENE-VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV--LNSHTQDVKHVVWH  159 (345)
T ss_dssp             CEEEEEECCC-EEEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE--ECCCCSCEEEEEEC
T ss_pred             cEEEEEccCCCeEEEEEc-cCCCCC-ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE--ecCcCCCeEEEEEC
Confidence            99999998764  45566 778887 99999999999999999999999999987654322211  12234569999999


Q ss_pred             cCCcEEEeec-CCeEEEEEecCCce--eeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC-------------
Q psy7482         155 PEGLLYAIPI-QNKAVVFSVEKAGV--LQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG-------------  216 (327)
Q Consensus       155 ~~~~~l~~~~-~~~i~i~d~~~~~~--~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~-------------  216 (327)
                      |++++|++++ |+.|++||.+.++.  ...+. |...|.+++|+|+ .+|++++.|+.|++||....             
T Consensus       160 p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~  239 (345)
T 3fm0_A          160 PSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP  239 (345)
T ss_dssp             SSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred             CCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence            9999999987 99999999988753  34555 8899999999999 78999999999999996432             


Q ss_pred             --ceeEEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc----e-----eEEeecccCceEEEeeeC---c
Q psy7482         217 --SHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS----H-----LWHIKASASRIKGLASHR---N  281 (327)
Q Consensus       217 --~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----~-----~~~~~~~~~~v~~~~~~~---~  281 (327)
                        +.+..+.+ |...|.+++|+  |++..|++++.|+.|++|+...+.    +     .....+|...|++++|+|   .
T Consensus       240 ~~~~~~~~~~~h~~~v~~v~~~--~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~  317 (345)
T 3fm0_A          240 SWKCICTLSGFHSRTIYDIAWC--QLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPG  317 (345)
T ss_dssp             EEEEEEEECSSCSSCEEEEEEC--TTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTT
T ss_pred             ccceeEEecCCCCCcEEEEEEe--cCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCce
Confidence              22334444 88899999995  899999999999999999987543    1     123457999999999999   4


Q ss_pred             EEEEEecCCcEEEEEccCc
Q psy7482         282 HLICITSAGDLVVWELNED  300 (327)
Q Consensus       282 ~l~~~~~dg~v~iw~~~~~  300 (327)
                      +|++++.||.|++|++...
T Consensus       318 ~laS~s~Dg~v~~W~~~~~  336 (345)
T 3fm0_A          318 LLASCSDDGEVAFWKYQRP  336 (345)
T ss_dssp             EEEEEETTSCEEEEEECC-
T ss_pred             EEEEcCCCCcEEEEEecCC
Confidence            8999999999999999887

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=2.3e-48  Score=326.00  Aligned_cols=278  Identities=18%  Similarity=0.327  Sum_probs=246.1

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccc------------------cEEEEEECCCCCeEEE
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEG------------------TITCLKFTPEGSHLIS   71 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~   71 (327)
                      +|.+.|.+++|  +|++||+|+ ++.+++|++.+++.+..+..|..                  .|.+++|+|++++|++
T Consensus        62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s  140 (393)
T 1erj_A           62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  140 (393)
T ss_dssp             ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence            69999999999  899999987 78999999999988777665432                  4999999999999999


Q ss_pred             ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEE
Q psy7482          72 CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSV  151 (327)
Q Consensus        72 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  151 (327)
                      |+.|+.|++||+.+++....+ .+|... |.+++|+|++++|++++.|+.|++||+++++....+....      .+.++
T Consensus       141 ~~~d~~i~iwd~~~~~~~~~~-~~h~~~-v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~------~v~~~  212 (393)
T 1erj_A          141 GAEDRLIRIWDIENRKIVMIL-QGHEQD-IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED------GVTTV  212 (393)
T ss_dssp             EETTSCEEEEETTTTEEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS------CEEEE
T ss_pred             EcCCCeEEEEECCCCcEEEEE-ccCCCC-EEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC------CcEEE
Confidence            999999999999999998888 888888 9999999999999999999999999999988766655433      39999


Q ss_pred             EEcc-CCcEEEeec-CCeEEEEEecCCceeeEe--------cCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC----
Q psy7482         152 VWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTL--------KSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG----  216 (327)
Q Consensus       152 ~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~--------~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~----  216 (327)
                      +|+| +++++++++ |+.|++||+++++.+..+        .|...|.+++|+|+ .++++++.|+.|++||+++.    
T Consensus       213 ~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~  292 (393)
T 1erj_A          213 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS  292 (393)
T ss_dssp             EECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------
T ss_pred             EEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcc
Confidence            9999 889999987 999999999998887766        26788999999999 78999999999999999763    


Q ss_pred             --------ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--------
Q psy7482         217 --------SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--------  280 (327)
Q Consensus       217 --------~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--------  280 (327)
                              .....+.+|...|.++++.  |++.+|++|+.|+.|++||+.+++++..+.+|...|.+++|++        
T Consensus       293 ~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~  370 (393)
T 1erj_A          293 DSKTPNSGTCEVTYIGHKDFVLSVATT--QNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY  370 (393)
T ss_dssp             --------CEEEEEECCSSCEEEEEEC--GGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC
T ss_pred             cccCCCCCcceEEEecccCcEEEEEEC--CCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCC
Confidence                    3455678899999999994  8999999999999999999999999999999999999999875        


Q ss_pred             cEEEEEecCCcEEEEEccCc
Q psy7482         281 NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 ~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++|++|+.||.|++|++...
T Consensus       371 ~~l~sgs~Dg~i~iW~~~~~  390 (393)
T 1erj_A          371 NVFATGSGDCKARIWKYKKI  390 (393)
T ss_dssp             EEEEEEETTSEEEEEEEEEC
T ss_pred             CEEEEECCCCcEEECccccc
Confidence            68999999999999998764

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.3e-48  Score=319.39  Aligned_cols=286  Identities=19%  Similarity=0.289  Sum_probs=237.5

Q ss_pred             EEeeeeccCCccEEEEEe--------CCCEEEEecCCCeEEEEEcccc-------ccccccccccccEEEEEECCCCCeE
Q psy7482           5 TQTFVTHSHTASVRSVAA--------TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPEGSHL   69 (327)
Q Consensus         5 ~~~~~~~~h~~~v~~~~~--------~~~~l~~~~~dg~v~~w~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l   69 (327)
                      .....++||.+.|++++|        ++++|++|+.|++|++||+.+.       .+...+.+|...|.+++|+|++.+|
T Consensus        12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l   91 (343)
T 2xzm_R           12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA   91 (343)
T ss_dssp             EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred             eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence            344456699999999988        7789999999999999998753       3456788999999999999999999


Q ss_pred             EEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          70 ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        70 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      ++|+.|++|++||+++++....+ .+|... |.+++|+|++++|++++.|+.|++||+..... ..  ......+...+.
T Consensus        92 ~s~s~D~~v~lwd~~~~~~~~~~-~~h~~~-v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~-~~--~~~~~~~~~~v~  166 (343)
T 2xzm_R           92 ISSSWDKTLRLWDLRTGTTYKRF-VGHQSE-VYSVAFSPDNRQILSAGAEREIKLWNILGECK-FS--SAEKENHSDWVS  166 (343)
T ss_dssp             EEEETTSEEEEEETTSSCEEEEE-ECCCSC-EEEEEECSSTTEEEEEETTSCEEEEESSSCEE-EE--CCTTTSCSSCEE
T ss_pred             EEEcCCCcEEEEECCCCcEEEEE-cCCCCc-EEEEEECCCCCEEEEEcCCCEEEEEeccCCce-ee--eecccCCCceee
Confidence            99999999999999999999888 888888 99999999999999999999999999974322 11  222223456699


Q ss_pred             EEEEccCC----------cEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCC
Q psy7482         150 SVVWSPEG----------LLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDG  216 (327)
Q Consensus       150 ~~~~~~~~----------~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~  216 (327)
                      +++|+|++          .++++++ |+.|++||. ..+....+. |...|.+++|+|+ .+|++|+.|+.|++||+...
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~  245 (343)
T 2xzm_R          167 CVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNL  245 (343)
T ss_dssp             EEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCC
T ss_pred             eeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence            99999986          6788777 999999994 455555665 8899999999999 78999999999999999543


Q ss_pred             -ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE--Eee-----------cccCceEEEeeeC--
Q psy7482         217 -SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW--HIK-----------ASASRIKGLASHR--  280 (327)
Q Consensus       217 -~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~-----------~~~~~v~~~~~~~--  280 (327)
                       .....+ .+...|.+++|+  |++.+++++ .|+.|++||+.+++...  .+.           +|...|.+++|+|  
T Consensus       246 ~~~~~~~-~~~~~v~~v~~s--p~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g  321 (343)
T 2xzm_R          246 TYPQREF-DAGSTINQIAFN--PKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALG  321 (343)
T ss_dssp             SSCSEEE-ECSSCEEEEEEC--SSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSS
T ss_pred             cccceee-cCCCcEEEEEEC--CCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCC
Confidence             344443 355679999995  888887755 57889999998776433  443           6778899999999  


Q ss_pred             cEEEEEecCCcEEEEEccCc
Q psy7482         281 NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 ~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++|++|+.||.|++|++.++
T Consensus       322 ~~l~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          322 KKLFAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             CCEEEEETTSEEEEEEEEEE
T ss_pred             CeEEEecCCceEEEEEEEcc
Confidence            89999999999999999765

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=4.7e-49  Score=325.74  Aligned_cols=280  Identities=14%  Similarity=0.224  Sum_probs=230.4

Q ss_pred             ccCCccEEEEEe--CCCEEEEecC------CCeEEEEEccccccccc----cccccccEEEEEECCCCCeEEEecCCCcE
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGA------DETVVLYDMVKRKQSGA----LMQHEGTITCLKFTPEGSHLISCSDDGSI   78 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~------dg~v~~w~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i   78 (327)
                      .+|...|.+++|  ||++||+|+.      |+.|++|+..++.+...    ..+|...|++++|+|++. +++++.||+|
T Consensus        39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v  117 (357)
T 4g56_B           39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV  117 (357)
T ss_dssp             -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred             ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence            479999999999  9999999997      78899999887765443    346889999999999985 5567889999


Q ss_pred             EEEEcCCCeEEEeE---EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482          79 AIFRVGSWQLEKLF---KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        79 ~iw~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      ++||+.+++.....   ..+|... |.+++|+|++++|++++.||.|++||+++++....+..     |...|.+++|+|
T Consensus       118 ~lWd~~~~~~~~~~~~~~~~h~~~-V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-----h~~~v~~v~~s~  191 (357)
T 4g56_B          118 ELWEILEKESLLVNKFAKYEHDDI-VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-----HSSEVNCVAACP  191 (357)
T ss_dssp             EEC--------CCCCEEECCCSSC-EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECT
T ss_pred             EEeeccccceeEEEeeccCCCCCC-EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-----CCCCEEEEEEcc
Confidence            99999887654322   1366776 99999999999999999999999999999887666543     244599999999


Q ss_pred             CCc-EEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecccc
Q psy7482         156 EGL-LYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASASR  228 (327)
Q Consensus       156 ~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~  228 (327)
                      ++. ++++++ |+.|++||+++++....+.   +...+.+++|+|+  .++++|+.|+.|++||+++++.+..+.+|...
T Consensus       192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~  271 (357)
T 4g56_B          192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN  271 (357)
T ss_dssp             TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC
T ss_pred             CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee
Confidence            875 566665 9999999999988776654   5678999999997  57889999999999999999999999999999


Q ss_pred             eEEEEEEecCCC-cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCc
Q psy7482         229 IKGLVFFSIPQE-TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       229 v~~~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~  300 (327)
                      |++++|+  |++ ++|++|+.|+.|+|||+++++.+..+ +|.+.|++++|+|   .+|++++.||+|++|++...
T Consensus       272 v~~l~~s--p~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          272 ITGLAYS--YHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             EEEEEEC--SSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred             EEEEEEc--CCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence            9999995  776 68999999999999999998877655 7999999999998   79999999999999999776

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.1e-47  Score=309.26  Aligned_cols=270  Identities=13%  Similarity=0.197  Sum_probs=236.0

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      +...++.+|.+.|++++|+|++++|++++.||.|++||+.+++.+..+ ..|... |.+++|+|++++|++|+.|+.|++
T Consensus         4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~s~s~d~~i~v   81 (304)
T 2ynn_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSI-QVTETP-VRAGKFIARKNWIIVGSDDFRIRV   81 (304)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-ECCSSC-EEEEEEEGGGTEEEEEETTSEEEE
T ss_pred             eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEe-eccCCc-EEEEEEeCCCCEEEEECCCCEEEE
Confidence            345678899999999999999999999999999999999999998888 777777 999999999999999999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCc-eeeEec-CCCceeEEEeec-C-ceE
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAG-VLQTLK-SESKVHSVCFLN-E-TTV  199 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~-~~~~~~-~~~~i~~~~~~~-~-~~l  199 (327)
                      ||+++++.+..+..+     ...|.+++|+|+++++++++ |+.|++||++++. ....+. |...|.+++|+| + ..+
T Consensus        82 wd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l  156 (304)
T 2ynn_A           82 FNYNTGEKVVDFEAH-----PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF  156 (304)
T ss_dssp             EETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred             EECCCCcEEEEEeCC-----CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence            999999876655433     44599999999999999987 9999999998874 445555 889999999999 4 689


Q ss_pred             EEeCCCCcEEEEEcCCCceeEEee-ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482         200 CTGNEESAITAYNLTDGSHLWQIK-ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       200 ~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      ++|+.|+.|++||+++......+. .|...+..+.+.+.+++.+|++++.|+.|++||+++++++..+.+|...|.+++|
T Consensus       157 ~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~  236 (304)
T 2ynn_A          157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF  236 (304)
T ss_dssp             EEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred             EEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEE
Confidence            999999999999998887766654 4667899999976568899999999999999999999999999999999999999


Q ss_pred             eC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         279 HR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       279 ~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +|  ++|++++.||.|++||+.+..  ....  ...+...+.+++|+|+
T Consensus       237 ~p~~~~l~s~s~Dg~i~iWd~~~~~--~~~~--~~~~~~~~~~~~~~~~  281 (304)
T 2ynn_A          237 HPTLPIIISGSEDGTLKIWNSSTYK--VEKT--LNVGLERSWCIATHPT  281 (304)
T ss_dssp             CSSSSEEEEEETTSCEEEEETTTCC--EEEE--ECCSSSSEEEEEECTT
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCc--eeee--ccCCCccEEEEEECCC
Confidence            99  899999999999999998872  2222  2345678999999986

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-47  Score=312.82  Aligned_cols=288  Identities=15%  Similarity=0.253  Sum_probs=228.5

Q ss_pred             eEEEeeeeccCCccEEEEEeCCCEEEEecCCCeEEEEEcccc--cccccc-cc-ccccEEEEEECCCCCeEEEecCCCcE
Q psy7482           3 TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKR--KQSGAL-MQ-HEGTITCLKFTPEGSHLISCSDDGSI   78 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~i   78 (327)
                      ++.+.+  ++|.++|.+++|++.+||+|+.|++|++||+..+  +....+ .+ |...|.+++|+|++++|++|+.|++|
T Consensus         5 ~~~~~~--~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v   82 (330)
T 2hes_X            5 NLIKSL--KLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV   82 (330)
T ss_dssp             EEEEEE--ECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             ccceee--ccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence            444544  4999999999996669999999999999999875  344444 34 99999999999999999999999999


Q ss_pred             EEEEcCC-------CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-cee-eeeeccccCccccceE
Q psy7482          79 AIFRVGS-------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSA-YITNLSSYGVGFENLD  149 (327)
Q Consensus        79 ~iw~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~-~~~~~~~~~~~~~~v~  149 (327)
                      ++||+..       .+....+ .+|... |.+++|+|++++|++++.|+.|++||++.. ... ....+.   .|...|.
T Consensus        83 ~iw~~~~~~~~~~~~~~~~~~-~~h~~~-V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~---~h~~~v~  157 (330)
T 2hes_X           83 SIWAKEESADRTFEMDLLAII-EGHENE-VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ---EHSQDVK  157 (330)
T ss_dssp             EEEEC-------CCCEEEEEE-C----C-EEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC---CCSSCEE
T ss_pred             EEEEcccCcCccccceeEEEE-cCCCCc-EEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec---cCCCceE
Confidence            9999853       3455566 788887 999999999999999999999999999543 211 111122   2345699


Q ss_pred             EEEEccCCcEEEeec-CCeEEEEEecCC--ceeeEec-CCCceeEEEeecC---ceEEEeCCCCcEEEEEcCCC------
Q psy7482         150 SVVWSPEGLLYAIPI-QNKAVVFSVEKA--GVLQTLK-SESKVHSVCFLNE---TTVCTGNEESAITAYNLTDG------  216 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~-~~~i~i~d~~~~--~~~~~~~-~~~~i~~~~~~~~---~~l~~~~~d~~i~i~d~~~~------  216 (327)
                      +++|+|++.+|++++ |+.|++||..++  +.+..+. |...|.+++|+|+   .++++++.|++|++||++.+      
T Consensus       158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~  237 (330)
T 2hes_X          158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ  237 (330)
T ss_dssp             EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred             EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence            999999999999998 999999999876  5666776 8899999999997   36899999999999998754      


Q ss_pred             --ceeEEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc--eeE-EeecccC-ceEEEeeeC----cEEEE
Q psy7482         217 --SHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS--HLW-HIKASAS-RIKGLASHR----NHLIC  285 (327)
Q Consensus       217 --~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~--~~~-~~~~~~~-~v~~~~~~~----~~l~~  285 (327)
                        .....+.. |...|.+++|.  + +.+|++++.||.|++||..+++  ... ...+|.. .|.+++|+|    ++|++
T Consensus       238 ~~~~~~~~~~~h~~~v~~v~~s--~-~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las  314 (330)
T 2hes_X          238 EWVCEAILPDVHKRQVYNVAWG--F-NGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILAT  314 (330)
T ss_dssp             EEEEEEECCSCCSSCEEEEEEC--T-TSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEE
T ss_pred             eeEEeeecccccccceEEEEEc--C-CCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEE
Confidence              23444544 88999999994  4 4589999999999999998874  333 3357876 899999987    58999


Q ss_pred             EecCCcEEEEEccCc
Q psy7482         286 ITSAGDLVVWELNED  300 (327)
Q Consensus       286 ~~~dg~v~iw~~~~~  300 (327)
                      |+.||.|++|+++..
T Consensus       315 ~s~Dg~v~~W~~~~~  329 (330)
T 2hes_X          315 GGDDGIVNFWSLEKA  329 (330)
T ss_dssp             EETTSEEEEEEC---
T ss_pred             ecCCCcEEEEEeccC
Confidence            999999999998753

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=1.2e-46  Score=332.62  Aligned_cols=309  Identities=17%  Similarity=0.211  Sum_probs=259.2

Q ss_pred             eeEEEeeee--ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCc
Q psy7482           2 YTLTQTFVT--HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS   77 (327)
Q Consensus         2 ~~~~~~~~~--~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~   77 (327)
                      +++...+..  ..+.+.+.+++|  +|++||+++ ++.|++|++.+++....+.+|...|++++|+|+|++||+|+.|++
T Consensus         4 ~~~~~~~~~~~~~~~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~   82 (611)
T 1nr0_A            4 FSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGN   82 (611)
T ss_dssp             CEEEEEECCCCCCCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred             cccccEECCCCCcccCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCC
Confidence            355555542  346778888889  899999987 679999999999999999999999999999999999999999999


Q ss_pred             EEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCC----CCEEEEEcCCCceeeeeeccccCccccceEEE
Q psy7482          78 IAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYITNLSSYGVGFENLDSV  151 (327)
Q Consensus        78 i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  151 (327)
                      |++||+.+++  ....+ ..|.+. |.+++|+|+++.|++++.+    +.|++||.  ++....     ...|...|.++
T Consensus        83 v~lWd~~~~~~~~~~~~-~~~~~~-v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~-----l~gh~~~v~~v  153 (611)
T 1nr0_A           83 VRIWDTTQTTHILKTTI-PVFSGP-VKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGN-----LTGQARAMNSV  153 (611)
T ss_dssp             EEEEESSSTTCCEEEEE-ECSSSC-EEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBC-----CCCCSSCEEEE
T ss_pred             EEEeECCCCcceeeEee-cccCCc-eEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcce-----ecCCCCCceEE
Confidence            9999997543  34455 677777 9999999999999998865    46888874  443322     23345679999


Q ss_pred             EEccCCc-EEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee----
Q psy7482         152 VWSPEGL-LYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK----  223 (327)
Q Consensus       152 ~~~~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~----  223 (327)
                      +|+|++. .|++++ |+.|++||..+++....+. |...|.+++|+|+ .+|++++.|+.|++||+.+++.+..+.    
T Consensus       154 ~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~  233 (611)
T 1nr0_A          154 DFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL  233 (611)
T ss_dssp             EECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS
T ss_pred             EECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc
Confidence            9999986 577776 9999999999988888887 8899999999999 789999999999999999998888874    


Q ss_pred             ---ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE------------------------------------
Q psy7482         224 ---ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW------------------------------------  264 (327)
Q Consensus       224 ---~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~------------------------------------  264 (327)
                         +|...|.+++|+  |++++|++++.|+.|++||+.+++.+.                                    
T Consensus       234 ~~~~h~~~V~~v~~s--pdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~  311 (611)
T 1nr0_A          234 KNVAHSGSVFGLTWS--PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP  311 (611)
T ss_dssp             SSCSSSSCEEEEEEC--TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred             cccccCCCEEEEEEC--CCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeC
Confidence               799999999994  999999999999999999998876543                                    


Q ss_pred             -------EeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         265 -------HIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       265 -------~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                             .+.+|...|++++|+|  ++|++++.||.|++||+..+   .........|...|.+++|+|+
T Consensus       312 ~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~---~~~~~~~~~h~~~v~~~~~s~~  378 (611)
T 1nr0_A          312 ELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG---ISNRVFPDVHATMITGIKTTSK  378 (611)
T ss_dssp             TTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---CEEECSSCSCSSCEEEEEECTT
T ss_pred             CCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC---ceeeecccCCcceEEEEEECCC
Confidence                   3357888999999999  89999999999999999887   2322222457788999999875

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=3.5e-46  Score=328.22  Aligned_cols=307  Identities=22%  Similarity=0.372  Sum_probs=262.2

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      +..+++||.+.|++++|  ||++||+|+.|++|+|||. +++++..+.+|...|++++|+|++++|++++.|++|++||.
T Consensus         8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~   86 (577)
T 2ymu_A            8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR   86 (577)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence            44567899999999999  9999999999999999995 78888999999999999999999999999999999999996


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeee---------c----------------
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN---------L----------------  138 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---------~----------------  138 (327)
                       +++.+..+ .+|... |.+++|+|++++|++++.|+.+++|+...........         .                
T Consensus        87 -~~~~~~~~-~~~~~~-v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  163 (577)
T 2ymu_A           87 -NGQLLQTL-TGHSSS-VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV  163 (577)
T ss_dssp             -TSCEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred             -CCCEEEEE-ECCCCC-EEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccce
Confidence             56778888 788887 9999999999999999999999999975432111000         0                


Q ss_pred             ----------cccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCC
Q psy7482         139 ----------SSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEE  205 (327)
Q Consensus       139 ----------~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d  205 (327)
                                .....+...+.++.++|+++++++++ |+.|++||. +++.+..+. |...|.+++|+|+ .++++++.|
T Consensus       164 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d  242 (577)
T 2ymu_A          164 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD  242 (577)
T ss_dssp             EEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred             eccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCC
Confidence                      00012335588999999999998887 999999996 456666666 8899999999999 789999999


Q ss_pred             CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEE
Q psy7482         206 SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHL  283 (327)
Q Consensus       206 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l  283 (327)
                      +.|++||. +++.+..+.+|...|.+++|.  |+++.+++++.|+.|++||. +++.+..+.+|...|.+++|+|  +.|
T Consensus       243 ~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~--~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l  318 (577)
T 2ymu_A          243 KTVKLWNR-NGQLLQTLTGHSSSVNGVAFR--PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTI  318 (577)
T ss_dssp             SCEEEECT-TSCEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             CEEEEEeC-CCCEEEEEecCCCCEEEEEEc--CCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEE
Confidence            99999996 567888899999999999995  99999999999999999995 5678888999999999999999  899


Q ss_pred             EEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         284 ICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       284 ~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ++++.||.|++|++...   ..  .....+...+.+++|+|+.
T Consensus       319 ~t~~~d~~i~~w~~~~~---~~--~~~~~~~~~v~~~~~s~~g  356 (577)
T 2ymu_A          319 ASASDDKTVKLWNRNGQ---HL--QTLTGHSSSVWGVAFSPDG  356 (577)
T ss_dssp             EEEETTSCEEEEETTSC---EE--EEECCCSSCEEEEEECTTS
T ss_pred             EEEeCCCeEEEEeCCCC---ee--EEEeCCCCCEEEEEECCCC
Confidence            99999999999998765   22  2334567789999999973

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.5e-46  Score=316.53  Aligned_cols=267  Identities=18%  Similarity=0.286  Sum_probs=240.9

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN  126 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  126 (327)
                      ...+.+|..+|++++|+|++.+|++|+.||+|++||+.+++....+ .+|... |.+++|+|++++|++|+.||.|++||
T Consensus       101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l-~~h~~~-V~~v~~~~~~~~l~sgs~D~~i~iwd  178 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL-KGHTDS-VQDISFDHSGKLLASCSADMTIKLWD  178 (410)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred             eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEE-eccCCc-EEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence            4567789999999999999999999999999999999999999888 888888 99999999999999999999999999


Q ss_pred             cCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeC
Q psy7482         127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGN  203 (327)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~  203 (327)
                      +.+++.+..+.     .|...|.+++|+|++.++++++ |+.|++||+++++.+..+. |...+.++.++|+ .++++++
T Consensus       179 ~~~~~~~~~~~-----~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s  253 (410)
T 1vyh_C          179 FQGFECIRTMH-----GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCS  253 (410)
T ss_dssp             TTSSCEEECCC-----CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             CCCCceeEEEc-----CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence            99887655443     2345599999999999999887 9999999999999988887 8889999999998 7899999


Q ss_pred             CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCC--------------------CcEEEEecCCCeEEEEEcCCCcee
Q psy7482         204 EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQ--------------------ETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       204 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~--------------------~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                      .|+.|++||+++++....+.+|...|.+++|.  |+                    +.+|++|+.|+.|++||+.+++++
T Consensus       254 ~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~  331 (410)
T 1vyh_C          254 NDQTVRVWVVATKECKAELREHRHVVECISWA--PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL  331 (410)
T ss_dssp             TTSCEEEEETTTCCEEEEECCCSSCEEEEEEC--CSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred             CCCeEEEEECCCCceeeEecCCCceEEEEEEc--CcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence            99999999999999999999999999999996  54                    678999999999999999999999


Q ss_pred             EEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         264 WHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       264 ~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ..+.+|...|++++|+|  ++|++++.||.|++||+..+.  ....+  ..|...|++++|+|+.
T Consensus       332 ~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~--~~~~~--~~h~~~v~~l~~~~~~  392 (410)
T 1vyh_C          332 MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR--CMKTL--NAHEHFVTSLDFHKTA  392 (410)
T ss_dssp             EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC--CCEEE--ECCSSCEEEEEECSSS
T ss_pred             EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--eEEEE--cCCCCcEEEEEEcCCC
Confidence            99999999999999999  899999999999999998772  23333  3577789999999973

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=5.3e-46  Score=302.99  Aligned_cols=268  Identities=16%  Similarity=0.252  Sum_probs=235.5

Q ss_pred             cccccccccccEEEEEECCC----CCeEEEecCCCcEEEEEcCCCeEE--EeEEecccCCceeeEEEecCCCEEEEEeCC
Q psy7482          46 QSGALMQHEGTITCLKFTPE----GSHLISCSDDGSIAIFRVGSWQLE--KLFKKAHKGTAVNHISIHPSGKLALSVGKD  119 (327)
Q Consensus        46 ~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  119 (327)
                      ....+.+|.+.|.+++|+|+    +.+|++|+.|++|++|++..++..  ..+ .+|... |.+++|++++.++++++.|
T Consensus        24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l-~gh~~~-v~~~~~~~~~~~l~s~s~D  101 (321)
T 3ow8_A           24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSL-EGHQLG-VVSVDISHTLPIAASSSLD  101 (321)
T ss_dssp             EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSC-EEEEEECSSSSEEEEEETT
T ss_pred             eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeee-ccCCCC-EEEEEECCCCCEEEEEeCC
Confidence            34456789999999999984    568999999999999999877643  345 778887 9999999999999999999


Q ss_pred             CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-
Q psy7482         120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-  196 (327)
Q Consensus       120 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-  196 (327)
                      +.|++||+++++.+..+....     ..+.+++|+|+++++++++ ++.+++||+++++....+. +...+.+++|+|+ 
T Consensus       102 ~~i~lWd~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg  176 (321)
T 3ow8_A          102 AHIRLWDLENGKQIKSIDAGP-----VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDG  176 (321)
T ss_dssp             SEEEEEETTTTEEEEEEECCT-----TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTS
T ss_pred             CcEEEEECCCCCEEEEEeCCC-----ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCC
Confidence            999999999998776654433     3488999999999999997 9999999999999888877 7788999999999 


Q ss_pred             ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEE
Q psy7482         197 TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGL  276 (327)
Q Consensus       197 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  276 (327)
                      .++++++.|+.|++||+++++.+..+.+|..+|.+++|+  |++++|++++.|+.|++||+++++.+..+.+|...|.++
T Consensus       177 ~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s--pd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~  254 (321)
T 3ow8_A          177 KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS--PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNV  254 (321)
T ss_dssp             SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC--TTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred             CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEc--CCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEE
Confidence            889999999999999999999999999999999999995  999999999999999999999999999999999999999


Q ss_pred             eeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         277 ASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       277 ~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +|+|  .+|++++.||.|++||+.++.    .......|...|.+++|+|+.
T Consensus       255 ~~sp~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~h~~~v~~v~~s~~g  302 (321)
T 3ow8_A          255 AFCPDDTHFVSSSSDKSVKVWDVGTRT----CVHTFFDHQDQVWGVKYNGNG  302 (321)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTS
T ss_pred             EECCCCCEEEEEeCCCcEEEEeCCCCE----EEEEEcCCCCcEEEEEECCCC
Confidence            9999  899999999999999998872    122234577889999999973

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=2.2e-46  Score=314.74  Aligned_cols=290  Identities=13%  Similarity=0.151  Sum_probs=253.0

Q ss_pred             EeeeeccCCccEEEEEeCCCEEEEecCCCeEEEEEccccc------cccccccccccEEEEEECCC----C---CeEEEe
Q psy7482           6 QTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRK------QSGALMQHEGTITCLKFTPE----G---SHLISC   72 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~~~   72 (327)
                      ....+.+|.+.|++++|+.++|++|+.||.|++||+.+++      ....+.+|...|++++|+|+    +   ++|+++
T Consensus         8 ~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~   87 (397)
T 1sq9_A            8 TANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT   87 (397)
T ss_dssp             EEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred             hhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence            3345569999999999977999999999999999999887      67888899999999999999    9   999999


Q ss_pred             cCCCcEEEEEcCCCeE-----EEeEEecc-----cCCceeeEEEe----cCCCE-EEEEeCCCCEEEEEcCC------Cc
Q psy7482          73 SDDGSIAIFRVGSWQL-----EKLFKKAH-----KGTAVNHISIH----PSGKL-ALSVGKDKTLRTWNLVK------GR  131 (327)
Q Consensus        73 ~~d~~i~iw~~~~~~~-----~~~~~~~~-----~~~~v~~~~~~----~~~~~-l~~~~~dg~i~iwd~~~------~~  131 (327)
                      +.||.|++||+.+++.     ...+ ..|     ... |.+++|+    |++++ |++++.||.|++||+++      ++
T Consensus        88 ~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~-v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  165 (397)
T 1sq9_A           88 SFSGDLLFYRITREDETKKVIFEKL-DLLDSDMKKHS-FWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL  165 (397)
T ss_dssp             ETTSCEEEEEEEECTTTCCEEEEEE-CCSCTTGGGSC-EEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred             cCCCCEEEEEccCCcccccccceee-cccccccCCCc-EEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence            9999999999988775     6666 666     355 9999999    99999 99999999999999988      55


Q ss_pred             eee-----eeec--cccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecC-------CCceeEEEeecC
Q psy7482         132 SAY-----ITNL--SSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKS-------ESKVHSVCFLNE  196 (327)
Q Consensus       132 ~~~-----~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~-------~~~i~~~~~~~~  196 (327)
                      ...     .+..  .....+...+.+++|+|++ ++++++ ++.|++||+++++.+..+..       ...+.+++|+|+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~  244 (397)
T 1sq9_A          166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ  244 (397)
T ss_dssp             TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred             eeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence            544     3321  0001234559999999999 888887 89999999999998888874       889999999998


Q ss_pred             -ceEEEeCCC---CcEEEEEcCCCceeEEeee-------------cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         197 -TTVCTGNEE---SAITAYNLTDGSHLWQIKA-------------SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       197 -~~l~~~~~d---~~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                       .++++++.|   +.|++||+++++.+..+..             |...|.+++|+  |++++|++++.|+.|++||+.+
T Consensus       245 ~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~  322 (397)
T 1sq9_A          245 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN--DSGETLCSAGWDGKLRFWDVKT  322 (397)
T ss_dssp             TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEEC--SSSSEEEEEETTSEEEEEETTT
T ss_pred             CCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEEC--CCCCEEEEEeCCCeEEEEEcCC
Confidence             889999999   9999999999999999988             99999999995  8999999999999999999999


Q ss_pred             CceeEEee------cc---------------cCceEEEeeeC-c-----------EEEEEecCCcEEEEEccCc
Q psy7482         260 GSHLWHIK------AS---------------ASRIKGLASHR-N-----------HLICITSAGDLVVWELNED  300 (327)
Q Consensus       260 ~~~~~~~~------~~---------------~~~v~~~~~~~-~-----------~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++.+..+.      +|               ...|++++|+| .           +|++++.||.|++|++.++
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence            99999999      88               89999999999 3           8999999999999999875

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=2.4e-45  Score=322.98  Aligned_cols=298  Identities=22%  Similarity=0.388  Sum_probs=258.9

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      .+.+|...|.+++|  ++++|++++.|+.|++||. +++....+.+|...|.+++|+|+++.|++++.|+.|++||....
T Consensus       257 ~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~  335 (577)
T 2ymu_A          257 TLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ  335 (577)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC
T ss_pred             EEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence            34589999999999  8999999999999999996 56777888899999999999999999999999999999998654


Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q  165 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~  165 (327)
                       ....+ ..|... +.+++|+|++++|++++.||.+++||. +++....+..     +...|.+++|+|+++++++++ |
T Consensus       336 -~~~~~-~~~~~~-v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~-----~~~~v~~~~~s~dg~~l~~~~~d  406 (577)
T 2ymu_A          336 -HLQTL-TGHSSS-VWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-----HSSSVRGVAFSPDGQTIASASDD  406 (577)
T ss_dssp             -EEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEEC-----CSSCEEEEEECTTSSCEEEEETT
T ss_pred             -eeEEE-eCCCCC-EEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecC-----CCCCeEEEEECCCCCEEEEEeCC
Confidence             44555 677777 999999999999999999999999995 4555444332     234599999999999999987 9


Q ss_pred             CeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482         166 NKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      +.|++||. +++.+..+. |...|.+++|+|+ .++++++.|+.|++||. +++.+..+.+|...|.+++|  +|++++|
T Consensus       407 ~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~--spd~~~l  482 (577)
T 2ymu_A          407 KTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAF--SPDGQTI  482 (577)
T ss_dssp             SEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEE--CTTSCEE
T ss_pred             CEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEE--cCCCCEE
Confidence            99999995 466666666 8899999999998 88999999999999996 56788889999999999999  4999999


Q ss_pred             EEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEE
Q psy7482         244 CTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLA  321 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~  321 (327)
                      ++++.|+.|++||. +++++..+.+|...|++++|+|  ++|++++.||.|++||....   ...  ....|...|++++
T Consensus       483 as~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~---~~~--~~~~h~~~v~~~~  556 (577)
T 2ymu_A          483 ASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---LLQ--TLTGHSSSVWGVA  556 (577)
T ss_dssp             EEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSC---EEE--EEECCSSCEEEEE
T ss_pred             EEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCC---EEE--EEcCCCCCEEEEE
Confidence            99999999999994 7889999999999999999999  89999999999999997433   222  2345788999999


Q ss_pred             eCCCC
Q psy7482         322 IRPPV  326 (327)
Q Consensus       322 ~~p~~  326 (327)
                      |+|+.
T Consensus       557 fs~dg  561 (577)
T 2ymu_A          557 FSPDG  561 (577)
T ss_dssp             ECTTS
T ss_pred             EcCCC
Confidence            99973

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-45  Score=307.43  Aligned_cols=291  Identities=13%  Similarity=0.164  Sum_probs=258.7

Q ss_pred             EEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482           4 LTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF   81 (327)
Q Consensus         4 ~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw   81 (327)
                      ..+.+.+.+|.+.|++++|  ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++|
T Consensus        22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw  101 (369)
T 3zwl_B           22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW  101 (369)
T ss_dssp             SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred             ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence            3566778899999999999  89999999999999999999999999999999999999999999999999999999999


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCceeeeeecccc------Cccc--cce
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAYITNLSSY------GVGF--ENL  148 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~------~~~~--~~v  148 (327)
                      |+.+++....+ . +... +.+++|+|+++++++++.+     |.|++||+..+...........      ..+.  ..+
T Consensus       102 d~~~~~~~~~~-~-~~~~-v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (369)
T 3zwl_B          102 DVSNGQCVATW-K-SPVP-VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA  178 (369)
T ss_dssp             ETTTCCEEEEE-E-CSSC-EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred             ECCCCcEEEEe-e-cCCC-eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence            99999998888 3 5555 9999999999999999998     9999999987654322211110      0111  259


Q ss_pred             EEEEEccCCcEEEeec-CCeEEEEEecC-CceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee
Q psy7482         149 DSVVWSPEGLLYAIPI-QNKAVVFSVEK-AGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       149 ~~~~~~~~~~~l~~~~-~~~i~i~d~~~-~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~  224 (327)
                      .+++|+|+++++++++ ++.|++||+++ ++.+..+. +...|.+++|+|+ .+|++++.|+.|++||+++++.+..+. 
T Consensus       179 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-  257 (369)
T 3zwl_B          179 TVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-  257 (369)
T ss_dssp             EEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred             eEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-
Confidence            9999999999999887 89999999998 67777777 8899999999999 789999999999999999999888887 


Q ss_pred             cccceEEEEEEecCCCcEEEEecCCC--------------eEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEec
Q psy7482         225 SASRIKGLVFFSIPQETTVCTGNEES--------------AITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITS  288 (327)
Q Consensus       225 ~~~~v~~~~~~~s~~~~~l~~~~~d~--------------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~  288 (327)
                      +...+..++|.  |+++++++++.++              .+++||..+++.+..+.+|...|.+++|+|  ++|++++.
T Consensus       258 ~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~  335 (369)
T 3zwl_B          258 TDCPLNTAVIT--PLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGE  335 (369)
T ss_dssp             CSSCEEEEEEC--SSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             CCCCceeEEec--CCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcC
Confidence            77789999994  9999999999888              899999999999999999999999999999  89999999


Q ss_pred             CCcEEEEEccCc
Q psy7482         289 AGDLVVWELNED  300 (327)
Q Consensus       289 dg~v~iw~~~~~  300 (327)
                      ||.|++|+++.+
T Consensus       336 dg~v~iw~~~~~  347 (369)
T 3zwl_B          336 DGFIRLHHFEKS  347 (369)
T ss_dssp             TSEEEEEEECHH
T ss_pred             CCeEEEEECccc
Confidence            999999999876

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.5e-46  Score=314.75  Aligned_cols=316  Identities=11%  Similarity=0.160  Sum_probs=262.6

Q ss_pred             EEeeeeccCCccEEEEEe--CCC-EEEEecCCCeEEEEEc----cccc------ccccccc----------ccccEEEEE
Q psy7482           5 TQTFVTHSHTASVRSVAA--TSK-LAASSGADETVVLYDM----VKRK------QSGALMQ----------HEGTITCLK   61 (327)
Q Consensus         5 ~~~~~~~~h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~----~~~~------~~~~~~~----------~~~~v~~~~   61 (327)
                      .+.+..+.|.+.|.+++|  +++ +||+|+.||.|++||+    .+++      ....+..          |...|++++
T Consensus        36 ~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (425)
T 1r5m_A           36 VKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA  115 (425)
T ss_dssp             CEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred             hhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence            345565678899999999  788 9999999999999999    8777      3444433          678999999


Q ss_pred             ECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc
Q psy7482          62 FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY  141 (327)
Q Consensus        62 ~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  141 (327)
                      |+|++++|++++.||.|++|| .+++....+ ..|... |.+++|+|++++|++++.||.|++||+++++....+.....
T Consensus       116 ~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~  192 (425)
T 1r5m_A          116 WSHDGNSIVTGVENGELRLWN-KTGALLNVL-NFHRAP-IVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKET  192 (425)
T ss_dssp             ECTTSSEEEEEETTSCEEEEE-TTSCEEEEE-CCCCSC-EEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--
T ss_pred             EcCCCCEEEEEeCCCeEEEEe-CCCCeeeec-cCCCcc-EEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeecccc
Confidence            999999999999999999999 667777777 778777 99999999999999999999999999999887666544332


Q ss_pred             Cc----------cccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEE
Q psy7482         142 GV----------GFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAIT  209 (327)
Q Consensus       142 ~~----------~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~  209 (327)
                      ..          ....+.+++|+|++.+++.+.++.|++||+++++.+..+. +...+.+++|+|+ .++++++.|+.|+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~  272 (425)
T 1r5m_A          193 GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLR  272 (425)
T ss_dssp             -------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred             CccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence            10          0111788999999876666669999999999998888887 8899999999998 7999999999999


Q ss_pred             EEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEe
Q psy7482         210 AYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICIT  287 (327)
Q Consensus       210 i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~  287 (327)
                      +||+++++.+..+..|...+.+++|+  |++ ++++++.|+.|++||+.+++.+..+..|...|.+++|+|  ++|++++
T Consensus       273 i~d~~~~~~~~~~~~~~~~i~~~~~~--~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  349 (425)
T 1r5m_A          273 IWHGGNGNSQNCFYGHSQSIVSASWV--GDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAF  349 (425)
T ss_dssp             EECSSSBSCSEEECCCSSCEEEEEEE--TTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred             EEECCCCccceEecCCCccEEEEEEC--CCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEE
Confidence            99999999999999999999999996  788 999999999999999999999999999999999999999  8999999


Q ss_pred             cCCcEEEEEccCccCC---------------Cceeeee-cCCCC--ceEEEEeCCCC
Q psy7482         288 SAGDLVVWELNEDVTR---------------EPQRVSA-TNDGC--RFTCLAIRPPV  326 (327)
Q Consensus       288 ~dg~v~iw~~~~~~~~---------------~~~~~~~-~~~~~--~i~~l~~~p~~  326 (327)
                      .||.|++|++......               ....+.. ..+..  .|++++|+|+.
T Consensus       350 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  406 (425)
T 1r5m_A          350 MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG  406 (425)
T ss_dssp             TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTS
T ss_pred             CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCC
Confidence            9999999999876200               0002222 22433  89999999973

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=5.9e-45  Score=299.68  Aligned_cols=282  Identities=17%  Similarity=0.278  Sum_probs=239.8

Q ss_pred             eeccCCccEEEEEe--C-CCEEEEecCCCeEEEEEccccc-----cccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           9 VTHSHTASVRSVAA--T-SKLAASSGADETVVLYDMVKRK-----QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~-~~~l~~~~~dg~v~~w~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      .++||.+.|++|+|  + +++||||+.|++|+|||+.+.+     +...+.+|...|.+++|+|++++|++++.|+.|++
T Consensus        33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~  112 (340)
T 4aow_A           33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL  112 (340)
T ss_dssp             EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence            35699999999999  3 6899999999999999987654     45677899999999999999999999999999999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC--c
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG--L  158 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~  158 (327)
                      |+.......... ..+... +....+++++.+|++++.|+.+++||+....... ....   .+...+..++|++++  .
T Consensus       113 ~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~~  186 (340)
T 4aow_A          113 WDLTTGTTTRRF-VGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-VQDE---SHSEWVSCVRFSPNSSNP  186 (340)
T ss_dssp             EETTTTEEEEEE-ECCSSC-EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-ECSS---SCSSCEEEEEECSCSSSC
T ss_pred             Eeecccceeeee-cCCCCc-eeEEEEeecCccceeecCCCeEEEEEeCCCceEE-EEec---cccCcccceEEccCCCCc
Confidence            999988887777 666666 8899999999999999999999999987654432 2222   234558999998865  4


Q ss_pred             EEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         159 LYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       159 ~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                      ++++++ |+.|++||+++++.+..+. |...|.+++|+|+ .+|++|+.|+.|++||+++.+.+..+..+ ..+..+.|.
T Consensus       187 ~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~  265 (340)
T 4aow_A          187 IIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFS  265 (340)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEEC
T ss_pred             EEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecC
Confidence            566665 9999999999999988887 8899999999999 88999999999999999999998888755 569999994


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEee---------cccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIK---------ASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---------~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                        |++. +++++.|+.|++||++++..+..+.         +|...|++++|+|  ++|++|+.||.|+|||+.++
T Consensus       266 --~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG  338 (340)
T 4aow_A          266 --PNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG  338 (340)
T ss_dssp             --SSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred             --CCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence              6655 5566679999999999887666554         5788999999999  89999999999999999987

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.8e-45  Score=294.90  Aligned_cols=276  Identities=16%  Similarity=0.204  Sum_probs=243.1

Q ss_pred             eeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC-
Q psy7482           9 VTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-   86 (327)
Q Consensus         9 ~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-   86 (327)
                      .+.+|.+.|.+++| ++++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.||.|++|++... 
T Consensus        13 ~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~   92 (313)
T 3odt_A           13 TLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS   92 (313)
T ss_dssp             EECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT
T ss_pred             HhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC
Confidence            44599999999999 9999999999999999999999988899999999999999999999999999999999998654 


Q ss_pred             --eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEee
Q psy7482          87 --QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIP  163 (327)
Q Consensus        87 --~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~  163 (327)
                        +....+ ..|... |.++.|  +++++++++.||.|++||  .++.......+     ...+.++.|.| ++..++++
T Consensus        93 ~~~~~~~~-~~~~~~-i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~  161 (313)
T 3odt_A           93 GEDPLYTL-IGHQGN-VCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAH-----NASVWDAKVVSFSENKFLTA  161 (313)
T ss_dssp             TSCC-CEE-CCCSSC-EEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECC-----SSCEEEEEEEETTTTEEEEE
T ss_pred             CCCcccch-hhcccC-EEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccC-----CCceeEEEEccCCCCEEEEE
Confidence              455566 677777 999999  477999999999999999  44444443332     34599999988 88888888


Q ss_pred             c-CCeEEEEEecCCceeeEec--CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482         164 I-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       164 ~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      + ++.+++||  ..+....+.  +...+.+++|+|++.+++++.|+.|++||+++++.+..+..|..++.+++|+  |++
T Consensus       162 ~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~--~~~  237 (313)
T 3odt_A          162 SADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLL--PNG  237 (313)
T ss_dssp             ETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC--TTS
T ss_pred             ECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEe--cCC
Confidence            7 99999999  445555555  7889999999999779999999999999999999999999999999999995  788


Q ss_pred             cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         241 TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                       .|++++.||.|++||+.+++++..+..|...|.+++|+| ..+++++.||.|++|++..+
T Consensus       238 -~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~  297 (313)
T 3odt_A          238 -DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS  297 (313)
T ss_dssp             -CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred             -CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence             689999999999999999999999999999999999999 55788999999999999987

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=3e-44  Score=295.00  Aligned_cols=280  Identities=14%  Similarity=0.221  Sum_probs=245.4

Q ss_pred             eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc-----cccccEEEEEECCCCCeEEEecCCCcEE
Q psy7482           7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-----QHEGTITCLKFTPEGSHLISCSDDGSIA   79 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~   79 (327)
                      .+...+|...|.+++|  ++++|++++ ||.|++||+.+++....+.     .|...|.+++|+|++++|++++.|+.|+
T Consensus        44 ~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  122 (337)
T 1gxr_A           44 QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS  122 (337)
T ss_dssp             EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE
T ss_pred             cceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence            3444579999999999  889999999 9999999998876443332     6899999999999999999999999999


Q ss_pred             EEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          80 IFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        80 iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      +||+.+++  ....+ ..|... |.+++|+|+++++++++.||.|++||+++++....+..     +...+.+++|+|++
T Consensus       123 ~~d~~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~  195 (337)
T 1gxr_A          123 IWDLAAPTPRIKAEL-TSSAPA-CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-----HTDGASCIDISNDG  195 (337)
T ss_dssp             EEECCCC--EEEEEE-ECSSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECTTS
T ss_pred             EEECCCCCcceeeec-ccCCCc-eEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-----ccCceEEEEECCCC
Confidence            99999877  44445 566666 99999999999999999999999999998877665543     23459999999999


Q ss_pred             cEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         158 LLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                      +++++++ |+.|++||+++++.+..+.+...+.+++|+|+ .++++++.++.|++||+++++. ..+..|..++.+++|+
T Consensus       196 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~  274 (337)
T 1gxr_A          196 TKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFA  274 (337)
T ss_dssp             SEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEEC
T ss_pred             CEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEEC
Confidence            9999887 99999999999999999999999999999999 7899999999999999988765 4677899999999995


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                        |++++|++++.||.|++||+.+++.+... .|...+.+++|+|  ++|++++.||.|++|++.
T Consensus       275 --~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~  336 (337)
T 1gxr_A          275 --YCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI  336 (337)
T ss_dssp             --TTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred             --CCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence              99999999999999999999999887554 4788999999999  899999999999999974

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=8.7e-45  Score=298.58  Aligned_cols=273  Identities=15%  Similarity=0.224  Sum_probs=235.3

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      +....+.+|.+.|++++|+|++++|++|+.||.|++||+.+++....+ ..|... |.+++|+|++++|++++.|+.+++
T Consensus        46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~s~~~d~~v~i  123 (340)
T 1got_B           46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAI-PLRSSW-VMTCAYAPSGNYVACGGLDNICSI  123 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE-ECSSSC-EEEEEECTTSSEEEEEETTCEEEE
T ss_pred             hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEe-ecCCcc-EEEEEECCCCCEEEEEeCCCeEEE
Confidence            445678899999999999999999999999999999999999988888 778777 999999999999999999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEe
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTG  202 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~  202 (327)
                      ||+.+++..... ......|...+.++.|++++.+++++.|+.|++||+++++.+..+. |...|.+++|+|+ .++++|
T Consensus       124 w~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg  202 (340)
T 1got_B          124 YNLKTREGNVRV-SRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG  202 (340)
T ss_dssp             EETTTCSBSCEE-EEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             EECccCCCccee-EEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence            999875422111 1111233456999999999886655569999999999999998887 8899999999999 789999


Q ss_pred             CCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec--ccCceEEEeeeC
Q psy7482         203 NEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA--SASRIKGLASHR  280 (327)
Q Consensus       203 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~  280 (327)
                      +.|+.|++||+++++.+..+.+|...|.+++|+  |++++|++|+.|+.|++||+++++.+..+..  +...|.+++|+|
T Consensus       203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~--p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~  280 (340)
T 1got_B          203 ACDASAKLWDVREGMCRQTFTGHESDINAICFF--PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK  280 (340)
T ss_dssp             ETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred             eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEc--CCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence            999999999999999999999999999999995  9999999999999999999999988777653  335799999999


Q ss_pred             --cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         281 --NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       281 --~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                        ++|++|+.||.|++||+....  ..  .....|..+|++++|+|+.
T Consensus       281 ~g~~l~~g~~d~~i~vwd~~~~~--~~--~~~~~h~~~v~~~~~s~dg  324 (340)
T 1got_B          281 SGRLLLAGYDDFNCNVWDALKAD--RA--GVLAGHDNRVSCLGVTDDG  324 (340)
T ss_dssp             TSSEEEEEETTSEEEEEETTTCC--EE--EEEECCSSCEEEEEECTTS
T ss_pred             CCCEEEEECCCCeEEEEEcccCc--Ee--eEeecCCCcEEEEEEcCCC
Confidence              899999999999999998772  22  2234577899999999973

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.2e-44  Score=310.26  Aligned_cols=305  Identities=16%  Similarity=0.262  Sum_probs=257.4

Q ss_pred             eeeccCCcc-EEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482           8 FVTHSHTAS-VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus         8 ~~~~~h~~~-v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      ..+.+|... +.++.+++++|++|+.||+|++||+.+++.+..+.+|.+.|.+++|+|++ .|++|+.||+|++||++++
T Consensus       115 ~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~  193 (464)
T 3v7d_B          115 TTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKG  193 (464)
T ss_dssp             EEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTT
T ss_pred             EEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCC
Confidence            355689887 57888899999999999999999999999999999999999999999988 9999999999999999999


Q ss_pred             eEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCCCceeeeeec------------------cccCcccc
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSAYITNL------------------SSYGVGFE  146 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------------------~~~~~~~~  146 (327)
                      +....+ .+|... |.+++|++  +++++++++.||.|++||++++........                  .....+..
T Consensus       194 ~~~~~~-~~h~~~-v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (464)
T 3v7d_B          194 CCTHVF-EGHNST-VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA  271 (464)
T ss_dssp             EEEEEE-CCCSSC-EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS
T ss_pred             cEEEEE-CCCCCc-cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc
Confidence            999888 788887 99999994  778999999999999999987764322110                  01122333


Q ss_pred             ceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee
Q psy7482         147 NLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK  223 (327)
Q Consensus       147 ~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~  223 (327)
                      .+.++  +++++++++++ |+.|++||+++++.+..+. |...+.+++|+|+ .++++|+.||.|++||+++++.+..+.
T Consensus       272 ~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~  349 (464)
T 3v7d_B          272 SVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQ  349 (464)
T ss_dssp             CEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred             eEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe
Confidence            45555  67788888887 9999999999999998888 8899999999998 899999999999999999999999999


Q ss_pred             ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482         224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      +|...|.++++    ++.+|++++.||.|++||+.++....... +...+..++|++  .++++++ ||.|++||+.++ 
T Consensus       350 ~h~~~v~~~~~----~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g-  422 (464)
T 3v7d_B          350 GHTALVGLLRL----SDKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG-  422 (464)
T ss_dssp             CCSSCEEEEEE----CSSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC-
T ss_pred             CCCCcEEEEEE----cCCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC-
Confidence            99999999998    26899999999999999999988766654 555777788888  7888877 999999999998 


Q ss_pred             CCCceeeeecCCCCceEEEEeCCCC
Q psy7482         302 TREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       302 ~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                        +........+...|.+++|+++.
T Consensus       423 --~~~~~~~~~~~~~v~~v~~~~~~  445 (464)
T 3v7d_B          423 --KLVHANILKDADQIWSVNFKGKT  445 (464)
T ss_dssp             --CEEESCTTTTCSEEEEEEEETTE
T ss_pred             --cEEehhhccCCCcEEEEEecCCE
Confidence              23222234577899999998653

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=2.7e-44  Score=306.42  Aligned_cols=298  Identities=18%  Similarity=0.321  Sum_probs=261.7

Q ss_pred             eeccCCcc-EEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482           9 VTHSHTAS-VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus         9 ~~~~h~~~-v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      .+.+|.+. +.++++++++|++|+.||+|++||+.+++.+..+.+|...|.+++|+  +++|++|+.||.|++||+.+++
T Consensus       113 ~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~  190 (445)
T 2ovr_B          113 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGE  190 (445)
T ss_dssp             EEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTE
T ss_pred             EecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCc
Confidence            45589886 57888899999999999999999999999999999999999999997  6699999999999999999999


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      ....+ .+|... |.++.|+  ++.+++++.||.|++||+++++....+..+     ...+.+++|  ++.++++++ |+
T Consensus       191 ~~~~~-~~h~~~-v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~-----~~~v~~~~~--~~~~l~~~~~dg  259 (445)
T 2ovr_B          191 CIHTL-YGHTST-VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGH-----VAAVRCVQY--DGRRVVSGAYDF  259 (445)
T ss_dssp             EEEEE-CCCSSC-EEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECC-----SSCEEEEEE--CSSCEEEEETTS
T ss_pred             EEEEE-CCCCCc-EEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCC-----cccEEEEEE--CCCEEEEEcCCC
Confidence            99988 788887 9999996  568999999999999999998876665433     345999998  677777776 99


Q ss_pred             eEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEE
Q psy7482         167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCT  245 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~  245 (327)
                      .|++||+++++.+..+. |...+.+++| ...++++++.|+.|++||+++++.+..+.+|...+.++.+    +++++++
T Consensus       260 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~  334 (445)
T 2ovr_B          260 MVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL----KDNILVS  334 (445)
T ss_dssp             CEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE----ETTEEEE
T ss_pred             EEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE----eCCEEEE
Confidence            99999999999999888 8889999999 3478999999999999999999999999999999988876    4679999


Q ss_pred             ecCCCeEEEEEcCCCceeEEeec---ccCceEEEeeeCcEEEEEecCCcEEEEEccCccCCCceeee---ecCCCCceEE
Q psy7482         246 GNEESAITAYNLTDGSHLWHIKA---SASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVS---ATNDGCRFTC  319 (327)
Q Consensus       246 ~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~---~~~~~~~i~~  319 (327)
                      ++.||.|++||+++++.+..+..   |...|.+++|++++|++++.||.|++||+.++.  ....+.   ...+...|++
T Consensus       335 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~v~~  412 (445)
T 2ovr_B          335 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE--FIRNLVTLESGGSGGVVWR  412 (445)
T ss_dssp             EETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC--EEEEEEECTTGGGTCEEEE
T ss_pred             EeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCc--eeeeeeccccCCCCceEEE
Confidence            99999999999999999999986   888999999999999999999999999999883  222231   1346788999


Q ss_pred             EEeCCCC
Q psy7482         320 LAIRPPV  326 (327)
Q Consensus       320 l~~~p~~  326 (327)
                      ++|+|+.
T Consensus       413 ~~~s~~~  419 (445)
T 2ovr_B          413 IRASNTK  419 (445)
T ss_dssp             EEECSSE
T ss_pred             EEecCCE
Confidence            9999973

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=9.4e-45  Score=325.34  Aligned_cols=283  Identities=18%  Similarity=0.322  Sum_probs=241.2

Q ss_pred             eeccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccc-----cccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRK-----QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         9 ~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      .+++|.+.|+++++   ++++|+||+.|++|++||+.+..     ....+.+|...|.+++|+|++++|++|+.||.|++
T Consensus       377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v  456 (694)
T 3dm0_A          377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL  456 (694)
T ss_dssp             EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence            45699999999999   45799999999999999987643     34567899999999999999999999999999999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC--c
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG--L  158 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~  158 (327)
                      ||+.+++....+ .+|... |.+++|+|++++|++++.|++|++||....... .. ......|...|.+++|+|++  .
T Consensus       457 wd~~~~~~~~~~-~~h~~~-v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~-~~-~~~~~~h~~~v~~~~~~~~~~~~  532 (694)
T 3dm0_A          457 WDLAAGVSTRRF-VGHTKD-VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY-TI-SEGGEGHRDWVSCVRFSPNTLQP  532 (694)
T ss_dssp             EETTTTEEEEEE-ECCSSC-EEEEEECTTSSCEEEEETTSCEEEECTTSCEEE-EE-CSSTTSCSSCEEEEEECSCSSSC
T ss_pred             EECCCCcceeEE-eCCCCC-EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce-ee-ccCCCCCCCcEEEEEEeCCCCcc
Confidence            999999999888 889888 999999999999999999999999998654332 22 12223456679999999987  4


Q ss_pred             EEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         159 LYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       159 ~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                      .+++++ |+.|++||+++++....+. |...|.+++|+|+ .++++++.||.|++||+++++.+..+.. ...+.+++|+
T Consensus       533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~s  611 (694)
T 3dm0_A          533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFS  611 (694)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEEC
T ss_pred             eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEc
Confidence            677776 9999999999999888887 8899999999999 8899999999999999999998887764 4579999994


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc-------------------CceEEEeeeC--cEEEEEecCCcEEE
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA-------------------SRIKGLASHR--NHLICITSAGDLVV  294 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------~~v~~~~~~~--~~l~~~~~dg~v~i  294 (327)
                        |++.++++++ ++.|++||+++++.+..+..+.                   ..+++++|+|  ++|++|+.||.|++
T Consensus       612 --p~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~i  688 (694)
T 3dm0_A          612 --PNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRV  688 (694)
T ss_dssp             --SSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred             --CCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEE
Confidence              8888887765 5669999999998887765332                   1378899999  99999999999999


Q ss_pred             EEccC
Q psy7482         295 WELNE  299 (327)
Q Consensus       295 w~~~~  299 (327)
                      |++..
T Consensus       689 W~i~~  693 (694)
T 3dm0_A          689 WGIGR  693 (694)
T ss_dssp             EEC--
T ss_pred             EeccC
Confidence            99853

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=2.2e-45  Score=305.16  Aligned_cols=283  Identities=18%  Similarity=0.208  Sum_probs=241.3

Q ss_pred             ccCCccEEEEEeC------CCEEEEecCCCeEEEEEcccccccccccc-----ccccEEEEEECCC----CCeEEEecCC
Q psy7482          11 HSHTASVRSVAAT------SKLAASSGADETVVLYDMVKRKQSGALMQ-----HEGTITCLKFTPE----GSHLISCSDD   75 (327)
Q Consensus        11 ~~h~~~v~~~~~~------~~~l~~~~~dg~v~~w~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~d   75 (327)
                      .+|.++|.+++|.      ...+++++.++.|++||+.+++.+..+..     |...|++++|+|+    +++|++|+.|
T Consensus        15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d   94 (366)
T 3k26_A           15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR   94 (366)
T ss_dssp             CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred             cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence            4899999999994      34566666678999999998887766654     5577999999998    6799999999


Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS  154 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~  154 (327)
                      |.|++||+.+++....+ ..|... |.+++|+| ++++|++++.||.|++||+++++....+..  ...+...+.+++|+
T Consensus        95 g~i~v~d~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~~  170 (366)
T 3k26_A           95 GIIRIINPITMQCIKHY-VGHGNA-INELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG--VEGHRDEVLSADYD  170 (366)
T ss_dssp             CEEEEECTTTCCEEEEE-ESCCSC-EEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS--TTSCSSCEEEEEEC
T ss_pred             CEEEEEEchhceEeeee-cCCCCc-EEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc--cccccCceeEEEEC
Confidence            99999999999999888 778887 99999999 899999999999999999998877655421  12234569999999


Q ss_pred             cCCcEEEeec-CCeEEEEEecCCceeeEec-----------------------------CCCceeEEEeecCceEEEeCC
Q psy7482         155 PEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-----------------------------SESKVHSVCFLNETTVCTGNE  204 (327)
Q Consensus       155 ~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-----------------------------~~~~i~~~~~~~~~~l~~~~~  204 (327)
                      |+++++++++ |+.|++||+++++....+.                             +...|.+++|+ .+++++++.
T Consensus       171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~  249 (366)
T 3k26_A          171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSC  249 (366)
T ss_dssp             TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECS
T ss_pred             CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEec
Confidence            9999999887 9999999999876543332                             78899999999 679999999


Q ss_pred             CCcEEEEEcCCCce--------------eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc----eeEEe
Q psy7482         205 ESAITAYNLTDGSH--------------LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS----HLWHI  266 (327)
Q Consensus       205 d~~i~i~d~~~~~~--------------~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~----~~~~~  266 (327)
                      |+.|++||+++++.              +..+..|...+.+++|++++++++|++++.||.|++||+.+++    ....+
T Consensus       250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~  329 (366)
T 3k26_A          250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL  329 (366)
T ss_dssp             SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred             CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE
Confidence            99999999987644              7778889999999999743339999999999999999999876    34477


Q ss_pred             ecc--cCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         267 KAS--ASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       267 ~~~--~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      ..|  ...|++++|+|  ++|++++.||.|++||+.
T Consensus       330 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          330 THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            777  78999999999  899999999999999985

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=3.5e-45  Score=300.32  Aligned_cols=277  Identities=12%  Similarity=0.107  Sum_probs=218.5

Q ss_pred             EEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC----------eEEEeEEecccCCceeeEE
Q psy7482          36 VVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW----------QLEKLFKKAHKGTAVNHIS  105 (327)
Q Consensus        36 v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----------~~~~~~~~~~~~~~v~~~~  105 (327)
                      .+.|++....+    ..|...|.+++|+|||++|++++ |+++++||....          .........+... |.+++
T Consensus        16 ~r~w~~~~~~~----~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~   89 (344)
T 4gqb_B           16 AREWNLPPNAP----ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAG-VADLT   89 (344)
T ss_dssp             -------CCSC----SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSC-EEEEE
T ss_pred             ccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCC-EEEEE
Confidence            46777654433    34677899999999999998887 667888863210          0001111234445 99999


Q ss_pred             EecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-
Q psy7482         106 IHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-  183 (327)
Q Consensus       106 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-  183 (327)
                      |+|++ .|++++.||.|++||+++++......... ..|...|.+++|+|++++|++++ |+.|++||+++++.+..+. 
T Consensus        90 ~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~-~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~  167 (344)
T 4gqb_B           90 WVGER-GILVASDSGAVELWELDENETLIVSKFCK-YEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA  167 (344)
T ss_dssp             EETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred             EeCCC-eEEEEECCCEEEEEeccCCCceeEeeccc-cCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence            99985 68899999999999999988765543321 23456699999999999999997 9999999999999999998 


Q ss_pred             CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         184 SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       184 ~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      |...|.+++|+|+  .++++++.|+.|++||+++++....+.  .|...+.+++|++ .++++|++|+.|+.|++||+++
T Consensus       168 h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~l~sg~~dg~v~~wd~~~  246 (344)
T 4gqb_B          168 HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHP-QQSEVFVFGDENGTVSLVDTKS  246 (344)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECS-SCTTEEEEEETTSEEEEEESCC
T ss_pred             cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecC-CCCcceEEeccCCcEEEEECCC
Confidence            8999999999997  478999999999999999999887764  4556789999963 4677899999999999999999


Q ss_pred             CceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         260 GSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       260 ~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ++++..+.+|...|++++|+|   ++|++|+.||+|+|||+..+     +.+....|...|++++|+|+.
T Consensus       247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-----~~~~~~~H~~~V~~v~~sp~~  311 (344)
T 4gqb_B          247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-----ELFRSQAHRDFVRDATWSPLN  311 (344)
T ss_dssp             --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-----EEEEECCCSSCEEEEEECSSS
T ss_pred             CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-----cEEEEcCCCCCEEEEEEeCCC
Confidence            999999999999999999998   57999999999999999887     334456688899999999963

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=1.3e-44  Score=301.24  Aligned_cols=284  Identities=13%  Similarity=0.213  Sum_probs=244.2

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      .|.++|.+++|  ++++|++|+.|+.|++||+.+++  .+..+.+|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus         6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~   85 (372)
T 1k8k_C            6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT   85 (372)
T ss_dssp             SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred             ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence            58999999999  89999999999999999999887  888899999999999999999999999999999999999887


Q ss_pred             EEEeEE-ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C
Q psy7482          88 LEKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q  165 (327)
Q Consensus        88 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~  165 (327)
                      ....+. ..|... |.+++|+|++++|++++.||.|++||++.++........ ...+...+.+++|+|+++++++++ |
T Consensus        86 ~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d  163 (372)
T 1k8k_C           86 WKPTLVILRINRA-ARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCD  163 (372)
T ss_dssp             EEEEEECCCCSSC-EEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE-CTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred             eeeeEEeecCCCc-eeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee-ecccCCCeeEEEEcCCCCEEEEEcCC
Confidence            655542 345555 999999999999999999999999999887642221111 112345699999999999999987 9


Q ss_pred             CeEEEEEec------------------CCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeec
Q psy7482         166 NKAVVFSVE------------------KAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       166 ~~i~i~d~~------------------~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  225 (327)
                      +.+++||++                  .++.+..+. +...+.+++|+|+ .++++++.|+.|++||+++++.+..+..|
T Consensus       164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  243 (372)
T 1k8k_C          164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASE  243 (372)
T ss_dssp             SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECS
T ss_pred             CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccC
Confidence            999999953                  567777775 7889999999999 79999999999999999999999999999


Q ss_pred             ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC--Cc--------------------------------ee------EE
Q psy7482         226 ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD--GS--------------------------------HL------WH  265 (327)
Q Consensus       226 ~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~--~~--------------------------------~~------~~  265 (327)
                      ..++.+++|+  |++.+++++ .|+.|++|++.+  ++                                ..      ..
T Consensus       244 ~~~v~~~~~~--~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (372)
T 1k8k_C          244 TLPLLAVTFI--TESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG  320 (372)
T ss_dssp             SCCEEEEEEE--ETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CC
T ss_pred             CCCeEEEEEe--cCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccc
Confidence            9999999996  789988888 899999999987  42                                00      22


Q ss_pred             e-ecccCceEEEeeeC------cEEEEEecCCcEEEEEccCc
Q psy7482         266 I-KASASRIKGLASHR------NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       266 ~-~~~~~~v~~~~~~~------~~l~~~~~dg~v~iw~~~~~  300 (327)
                      + .+|..+|++++|.+      .+|++++.||.|++|++...
T Consensus       321 ~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~  362 (372)
T 1k8k_C          321 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL  362 (372)
T ss_dssp             CSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred             ccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence            3 48999999999764      49999999999999999876

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=3.1e-44  Score=300.29  Aligned_cols=277  Identities=15%  Similarity=0.194  Sum_probs=232.5

Q ss_pred             eeccCCccEEEEEe--CC-CEEEEecCCCeEEEEEccccccccccc--cccccEEEEEECC-CCCeEEEecCCCcEEEEE
Q psy7482           9 VTHSHTASVRSVAA--TS-KLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTP-EGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~-~~l~~~~~dg~v~~w~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~   82 (327)
                      .+.+|...|.+++|  ++ ++|++|+.||.|++||+.+++....+.  +|...|.+++|+| ++++|++++.|+.|++||
T Consensus        68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd  147 (383)
T 3ei3_B           68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD  147 (383)
T ss_dssp             EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred             eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence            34589999999999  66 899999999999999999887776665  6999999999999 789999999999999999


Q ss_pred             cCCCeEEEeEEeccc---CCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-
Q psy7482          83 VGSWQLEKLFKKAHK---GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-  158 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-  158 (327)
                      +.+ +....+ ..+.   .. |.+++|+|++++|++++.||.|++||++ ++....+..     +...|.+++|+|+++ 
T Consensus       148 ~~~-~~~~~~-~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~-----h~~~v~~~~~~~~~~~  218 (383)
T 3ei3_B          148 FSG-SVIQVF-AKTDSWDYW-YCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKL-----HKAKVTHAEFNPRCDW  218 (383)
T ss_dssp             TTS-CEEEEE-ECCCCSSCC-EEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEEC-----SSSCEEEEEECSSCTT
T ss_pred             CCC-CceEEE-eccCCCCCC-eEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEecc-----CCCcEEEEEECCCCCC
Confidence            986 444454 3333   44 9999999999999999999999999994 555444432     234599999999998 


Q ss_pred             EEEeec-CCeEEEEEecC----CceeeEecCCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCceeEEeeecc-----
Q psy7482         159 LYAIPI-QNKAVVFSVEK----AGVLQTLKSESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGSHLWQIKASA-----  226 (327)
Q Consensus       159 ~l~~~~-~~~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----  226 (327)
                      ++++++ |+.|++||+++    +..+..+.+...+.+++|+| + .++++++.|+.|++||+++++.+..+..|.     
T Consensus       219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~  298 (383)
T 3ei3_B          219 LMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ  298 (383)
T ss_dssp             EEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT
T ss_pred             EEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc
Confidence            888887 99999999998    66777778999999999999 7 789999999999999999988877776553     


Q ss_pred             ------------cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec--ccCceEEEeeeC--cEEEEEecCC
Q psy7482         227 ------------SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA--SASRIKGLASHR--NHLICITSAG  290 (327)
Q Consensus       227 ------------~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~--~~l~~~~~dg  290 (327)
                                  ..+..+++  +|++++  +++.|+.|++||+.+++.+..+.+  |...+..++|+|  ++|++++ ||
T Consensus       299 ~~~~~~~~~~p~~~~~~~~~--s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~  373 (383)
T 3ei3_B          299 HLTPIKATWHPMYDLIVAGR--YPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GF  373 (383)
T ss_dssp             TSCCCCCEECSSSSEEEEEC--BCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TT
T ss_pred             cccceEEeccCCCCceEEEe--cCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CC
Confidence                        23334555  367776  888999999999999999999987  456777889999  8888886 99


Q ss_pred             cEEEEEccC
Q psy7482         291 DLVVWELNE  299 (327)
Q Consensus       291 ~v~iw~~~~  299 (327)
                      .|++||+++
T Consensus       374 ~i~iw~~~~  382 (383)
T 3ei3_B          374 NILIWNRED  382 (383)
T ss_dssp             EEEEEECC-
T ss_pred             cEEEEecCC
Confidence            999999875

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.8e-45  Score=304.23  Aligned_cols=286  Identities=15%  Similarity=0.185  Sum_probs=215.6

Q ss_pred             CEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC------CCcEEEEEcCCCeEEEeE---Eec
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD------DGSIAIFRVGSWQLEKLF---KKA   95 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~---~~~   95 (327)
                      ++++.++.+.....|++....+    ..|...|++++|+|||++|++|+.      |+.|++|+..++.....+   ...
T Consensus        17 ~~~~~~~g~~~~~~w~~p~~~p----~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~   92 (357)
T 4g56_B           17 NLYFQSNGSSKGSAWGRPVTAP----ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQ   92 (357)
T ss_dssp             ---------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEE
T ss_pred             ceEEecCCCccccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCC
Confidence            3444555577889999865433    469999999999999999999997      778999988776543221   145


Q ss_pred             ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEec
Q psy7482          96 HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVE  174 (327)
Q Consensus        96 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~  174 (327)
                      |... |.+++|+|++. +++++.||.|++||+.+++......... ..|...|.+++|+|++++|++++ |+.|++||++
T Consensus        93 ~~~~-V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~-~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~  169 (357)
T 4g56_B           93 TEAG-VTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAK-YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS  169 (357)
T ss_dssp             CSSC-EEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEE-CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred             CCCC-EEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeecc-CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence            6666 99999999875 5667889999999999887654332221 23456699999999999999987 9999999999


Q ss_pred             CCceeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEEecCC-CcEEEEecC
Q psy7482         175 KAGVLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFFSIPQ-ETTVCTGNE  248 (327)
Q Consensus       175 ~~~~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~s~~-~~~l~~~~~  248 (327)
                      +++.+..+. |...|.+++|+|+  .++++++.|+.|++||++++++...+.  .|...+.+++|+  |+ +.+|++|+.
T Consensus       170 ~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~s--p~~~~~la~g~~  247 (357)
T 4g56_B          170 QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWH--PEKDDTFACGDE  247 (357)
T ss_dssp             TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEEC--TTSTTEEEEEES
T ss_pred             CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhh--hcccceEEEeec
Confidence            999999988 8899999999997  578999999999999999988766553  466789999996  65 678999999


Q ss_pred             CCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482         249 ESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       249 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                      |+.|++||+++++++..+.+|...|++++|+|   ++|++++.||+|+|||++.+     +.+....|...|++++|+|
T Consensus       248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-----~~~~~~~H~~~V~~vafsP  321 (357)
T 4g56_B          248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-----EVFRDLSHRDFVTGVAWSP  321 (357)
T ss_dssp             SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-----EEEEECCCSSCEEEEEECS
T ss_pred             ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-----cEeEECCCCCCEEEEEEeC
Confidence            99999999999999999999999999999998   68999999999999999887     3444557889999999998

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=7.7e-45  Score=300.91  Aligned_cols=286  Identities=14%  Similarity=0.146  Sum_probs=240.0

Q ss_pred             eccCCccEEEEEe--CCC-EEEEecC---CCeEEEEEcccccccccc-ccccccEEEEEECCC---CCeEEEecCCCcEE
Q psy7482          10 THSHTASVRSVAA--TSK-LAASSGA---DETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPE---GSHLISCSDDGSIA   79 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~-~l~~~~~---dg~v~~w~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~   79 (327)
                      .++|...|.+++|  ++. ++++|+.   ||.|++||+.+++..... .+|...|.+++|+|+   +++|++|+.||.|+
T Consensus        14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~   93 (357)
T 3i2n_A           14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH   93 (357)
T ss_dssp             EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred             ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence            3589999999999  564 5567766   999999999988765443 368999999999998   69999999999999


Q ss_pred             EEEcCCCe-EEEeEEecccCCceeeEEE------ecCCCEEEEEeCCCCEEEEEcCCCc-eeeeeeccccCccccceEEE
Q psy7482          80 IFRVGSWQ-LEKLFKKAHKGTAVNHISI------HPSGKLALSVGKDKTLRTWNLVKGR-SAYITNLSSYGVGFENLDSV  151 (327)
Q Consensus        80 iw~~~~~~-~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~  151 (327)
                      +||+.+++ ....+ ..|... |.++.|      +|++++|++++.||.|++||+++++ ....+.... ......+.++
T Consensus        94 iwd~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~~~~~~v~~~  170 (357)
T 3i2n_A           94 IWNLEAPEMPVYSV-KGHKEI-INAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQ-GENKRDCWTV  170 (357)
T ss_dssp             EECTTSCSSCSEEE-CCCSSC-EEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCT-TSCCCCEEEE
T ss_pred             EEeCCCCCccEEEE-Eecccc-eEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccC-CCCCCceEEE
Confidence            99999887 77777 788887 999955      6789999999999999999999876 444433222 1123358888


Q ss_pred             E----EccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeec---C-ceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482         152 V----WSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLN---E-TTVCTGNEESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       152 ~----~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~---~-~~l~~~~~d~~i~i~d~~~~~~~~~~  222 (327)
                      +    |+|+++++++++ ++.|++||+++++......+...+.+++|+|   + +++++++.||.|++||+++++.+..+
T Consensus       171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  250 (357)
T 3i2n_A          171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF  250 (357)
T ss_dssp             EEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred             EEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence            8    788999999987 8999999999999877777999999999998   7 88999999999999999887765555


Q ss_pred             e-----ecccceEEEEEEecCCCc-EEEEecCCCeEEEEEcCCC-------------------ceeEEeecccCceEEEe
Q psy7482         223 K-----ASASRIKGLVFFSIPQET-TVCTGNEESAITAYNLTDG-------------------SHLWHIKASASRIKGLA  277 (327)
Q Consensus       223 ~-----~~~~~v~~~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~-------------------~~~~~~~~~~~~v~~~~  277 (327)
                      .     +|...|.+++|+  |+++ +|++++.||.|++||++++                   +.+..+.+|..+|++++
T Consensus       251 ~~~~~~~~~~~v~~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~  328 (357)
T 3i2n_A          251 ASVSEKAHKSTVWQVRHL--PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLD  328 (357)
T ss_dssp             EEEEEECCSSCEEEEEEE--TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEE
T ss_pred             eeeccCCCcCCEEEEEEC--CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEE
Confidence            4     899999999996  8888 8999999999999999754                   36778889999999999


Q ss_pred             eeC--cEEE-EEecCCcEEEEEccCc
Q psy7482         278 SHR--NHLI-CITSAGDLVVWELNED  300 (327)
Q Consensus       278 ~~~--~~l~-~~~~dg~v~iw~~~~~  300 (327)
                      |+|  ++|+ +++.||.|++|++...
T Consensus       329 ~s~~~~~l~~s~~~d~~i~iw~~~~~  354 (357)
T 3i2n_A          329 WSPDKRGLCVCSSFDQTVRVLIVTKL  354 (357)
T ss_dssp             ECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred             EcCCCCeEEEEecCCCcEEEEECCCc
Confidence            999  6776 8999999999999875

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=1.5e-44  Score=307.11  Aligned_cols=295  Identities=13%  Similarity=0.285  Sum_probs=243.2

Q ss_pred             eccCCccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          10 THSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        10 ~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      ..+|...|.++++++++|++|+.||.|++||+.+++....+.+|...|.+++|  ++++|++|+.||.|++||+.+++..
T Consensus       129 ~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~  206 (435)
T 1p22_A          129 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML  206 (435)
T ss_dssp             CCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred             ccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence            34678889999999999999999999999999999999999999999999999  6889999999999999999999999


Q ss_pred             EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeE
Q psy7482          90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKA  168 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i  168 (327)
                      ..+ ..|... |.+++|+  +..+++++.||.|++||+++++.......  ...+...+.+++|  +++++++++ |+.|
T Consensus       207 ~~~-~~h~~~-v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~--~~~~l~s~~~dg~i  278 (435)
T 1p22_A          207 NTL-IHHCEA-VLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRV--LVGHRAAVNVVDF--DDKYIVSASGDRTI  278 (435)
T ss_dssp             EEE-CCCCSC-EEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEE--ECCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred             EEE-cCCCCc-EEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeE--ecCCCCcEEEEEe--CCCEEEEEeCCCeE
Confidence            888 788877 9999997  45999999999999999998776532111  1223456999998  677888886 9999


Q ss_pred             EEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec
Q psy7482         169 VVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN  247 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~  247 (327)
                      ++||+++++.+..+. |...+.++.++ ++++++|+.||.|++||+++++.+..+.+|...|.++++    ++.+|++|+
T Consensus       279 ~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~----~~~~l~sg~  353 (435)
T 1p22_A          279 KVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF----DNKRIVSGA  353 (435)
T ss_dssp             EEEETTTCCEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC----CSSEEEEEE
T ss_pred             EEEECCcCcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe----cCCEEEEEe
Confidence            999999999999888 88899999995 479999999999999999999999999999999999986    688999999


Q ss_pred             CCCeEEEEEcCCCc---------eeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceE
Q psy7482         248 EESAITAYNLTDGS---------HLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFT  318 (327)
Q Consensus       248 ~d~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~  318 (327)
                      .||.|++||+.+++         ++..+.+|.+.|.+++|++.+|++++.||.|++||+....  .   ........+..
T Consensus       354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~~--~---~~~~~~~~~~~  428 (435)
T 1p22_A          354 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDP--A---AQAEPPRSPSR  428 (435)
T ss_dssp             TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC----------------------
T ss_pred             CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCCC--C---cccCCCCCCcc
Confidence            99999999997766         7889999999999999988999999999999999998873  1   11222334455


Q ss_pred             EEEeCC
Q psy7482         319 CLAIRP  324 (327)
Q Consensus       319 ~l~~~p  324 (327)
                      ++.|.+
T Consensus       429 ~~~~~~  434 (435)
T 1p22_A          429 TYTYIS  434 (435)
T ss_dssp             ------
T ss_pred             ceeeec
Confidence            666654

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1e-44  Score=306.79  Aligned_cols=300  Identities=11%  Similarity=0.117  Sum_probs=250.5

Q ss_pred             EEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      +++++|  ++++|++|+.||.|++||+.+++....+..| ..+....|+|++++|++|+.||.|++||+.+++....+ .
T Consensus        59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~  136 (420)
T 3vl1_A           59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID-Q  136 (420)
T ss_dssp             CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET-T
T ss_pred             ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec-c
Confidence            335667  8999999999999999999999888888776 45556678999999999999999999999998887776 6


Q ss_pred             cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEe
Q psy7482          95 AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSV  173 (327)
Q Consensus        95 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~  173 (327)
                      .|... |.+++|+|++++|++++.||.|++||+++++....+..     |...|.+++|+|+++++++++ |+.|++||+
T Consensus       137 ~h~~~-v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  210 (420)
T 3vl1_A          137 AHVSE-ITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-----HRATVTDIAIIDRGRNVLSASLDGTIRLWEC  210 (420)
T ss_dssp             SSSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-----CSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred             cccCc-cEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-----CCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence            78887 99999999999999999999999999999887665542     344599999999999999887 999999999


Q ss_pred             cCCceeeEec----CCCcee---------------------EEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee-ecc
Q psy7482         174 EKAGVLQTLK----SESKVH---------------------SVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK-ASA  226 (327)
Q Consensus       174 ~~~~~~~~~~----~~~~i~---------------------~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~  226 (327)
                      ++++.+..+.    +...+.                     +++|+|+ .++++++.||.|++||+++++.+..+. .|.
T Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~  290 (420)
T 3vl1_A          211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT  290 (420)
T ss_dssp             TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS
T ss_pred             CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC
Confidence            9999888876    333444                     4455677 689999999999999999998877764 478


Q ss_pred             cceEEEEEEecCCCc-EEEEecCCCeEEEEEcCCCc-eeEEeec-ccCceEEEeeeC-cEEEEEecCCcEEEEEccCccC
Q psy7482         227 SRIKGLVFFSIPQET-TVCTGNEESAITAYNLTDGS-HLWHIKA-SASRIKGLASHR-NHLICITSAGDLVVWELNEDVT  302 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~~-~~~~~~~-~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~  302 (327)
                      ..+.+++|+  |++. +|++|+.||.|++||+++++ ++..+.. |...|.++.+.+ .+|++++.||.|++|++.....
T Consensus       291 ~~v~~~~~~--~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~  368 (420)
T 3vl1_A          291 CSCNSLTVD--GNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPES  368 (420)
T ss_dssp             SCEEEEEEC--SSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTC
T ss_pred             CCceeEEEe--CCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCC
Confidence            899999995  8888 99999999999999999875 4777776 677899998877 8999999999999999987531


Q ss_pred             CC-----ceeeeecCCCCceEEEEeCCCC
Q psy7482         303 RE-----PQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       303 ~~-----~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ..     ........+...|.+++|+|+.
T Consensus       369 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~  397 (420)
T 3vl1_A          369 ERPAIEFETPTFLVSNDDAVSQFCYVSDD  397 (420)
T ss_dssp             CSCEECTTSCEEECCSSCCCCEEEEECCS
T ss_pred             CccceeccCccEEccCCcceEEEEEccCC
Confidence            11     1112233466789999999974

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-45  Score=309.48  Aligned_cols=282  Identities=14%  Similarity=0.240  Sum_probs=244.6

Q ss_pred             CCccEEEEEe--CCC-EEEEe----------cCCCeEEEEEccccc---cccccccccccEEEEEECCCCCeEEEecCCC
Q psy7482          13 HTASVRSVAA--TSK-LAASS----------GADETVVLYDMVKRK---QSGALMQHEGTITCLKFTPEGSHLISCSDDG   76 (327)
Q Consensus        13 h~~~v~~~~~--~~~-~l~~~----------~~dg~v~~w~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~   76 (327)
                      +...|.+++|  +++ +|++|          +.|+.|++||+.+++   .+..+ .|...|++++|+|++++|++++.||
T Consensus        11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg   89 (416)
T 2pm9_A           11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNG   89 (416)
T ss_dssp             EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSS
T ss_pred             hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCC
Confidence            4567888999  665 99999          889999999999876   33333 5889999999999999999999999


Q ss_pred             cEEEEEcCC----CeEEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCc------eeeeeeccccCccc
Q psy7482          77 SIAIFRVGS----WQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGR------SAYITNLSSYGVGF  145 (327)
Q Consensus        77 ~i~iw~~~~----~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~  145 (327)
                      .|++||+.+    .+....+ ..|... |.+++|+|+ +++|++++.||.|++||+++++      ....  ......+.
T Consensus        90 ~v~vw~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~  165 (416)
T 2pm9_A           90 SLELYSTNEANNAINSMARF-SNHSSS-VKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLT--PGQSMSSV  165 (416)
T ss_dssp             CEEEECCSSTTSCCCEEEEC-CCSSSC-CCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBC--CCCSCCSS
T ss_pred             eEEEeecccccccccchhhc-cCCccc-eEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccc--cccccCCC
Confidence            999999987    3466666 778877 999999998 8999999999999999998876      2221  22223345


Q ss_pred             cceEEEEEccC-CcEEEeec-CCeEEEEEecCCceeeEec-C------CCceeEEEeecC--ceEEEeCCCC---cEEEE
Q psy7482         146 ENLDSVVWSPE-GLLYAIPI-QNKAVVFSVEKAGVLQTLK-S------ESKVHSVCFLNE--TTVCTGNEES---AITAY  211 (327)
Q Consensus       146 ~~v~~~~~~~~-~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~------~~~i~~~~~~~~--~~l~~~~~d~---~i~i~  211 (327)
                      ..+.+++|+|+ +.++++++ |+.|++||+++++.+..+. +      ...+.+++|+|+  .++++++.|+   .|++|
T Consensus       166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~  245 (416)
T 2pm9_A          166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW  245 (416)
T ss_dssp             CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred             CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence            66999999999 67888876 9999999999999988887 3      688999999998  4799999998   99999


Q ss_pred             EcCCC-ceeEEee-ecccceEEEEEEecC-CCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEE
Q psy7482         212 NLTDG-SHLWQIK-ASASRIKGLVFFSIP-QETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLIC  285 (327)
Q Consensus       212 d~~~~-~~~~~~~-~~~~~v~~~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~  285 (327)
                      |++++ +++..+. +|...|.+++|+  | ++++|++++.|+.|++||+.+++++..+.+|...|.+++|+|   .+|++
T Consensus       246 d~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s  323 (416)
T 2pm9_A          246 DLRNANTPLQTLNQGHQKGILSLDWC--HQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFAC  323 (416)
T ss_dssp             ETTSTTSCSBCCCSCCSSCEEEEEEC--SSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEE
T ss_pred             eCCCCCCCcEEeecCccCceeEEEeC--CCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEE
Confidence            99986 5677787 899999999995  7 999999999999999999999999999999999999999999   69999


Q ss_pred             EecCCcEEEEEccCcc
Q psy7482         286 ITSAGDLVVWELNEDV  301 (327)
Q Consensus       286 ~~~dg~v~iw~~~~~~  301 (327)
                      ++.||.|++|++....
T Consensus       324 ~~~d~~i~iw~~~~~~  339 (416)
T 2pm9_A          324 ASFDNKIEVQTLQNLT  339 (416)
T ss_dssp             CCSSSEEEEEESCCCC
T ss_pred             EecCCcEEEEEccCCC
Confidence            9999999999998763

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.1e-43  Score=293.27  Aligned_cols=274  Identities=14%  Similarity=0.231  Sum_probs=234.0

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      +....+.+|...|++++|+|++++|++|+.||+|++||..+++....+ ..+... |.+++|+|++.++++++.|+.+++
T Consensus        55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~-~~~~~~-v~~~~~sp~g~~lasg~~d~~i~v  132 (354)
T 2pbi_B           55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAV-TMPCTW-VMACAYAPSGCAIACGGLDNKCSV  132 (354)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSSC-CCEEEECTTSSEEEEESTTSEEEE
T ss_pred             EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEE-ecCCCC-EEEEEECCCCCEEEEeeCCCCEEE
Confidence            345678899999999999999999999999999999999999888887 667776 999999999999999999999999


Q ss_pred             EEcCCCceeeee-eccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC---ce
Q psy7482         125 WNLVKGRSAYIT-NLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE---TT  198 (327)
Q Consensus       125 wd~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~---~~  198 (327)
                      |++......... .......|...+.+++|+|++..+++++ |+.|++||+++++.+..+. |...+.+++++|+   .+
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~  212 (354)
T 2pbi_B          133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT  212 (354)
T ss_dssp             EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred             EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence            998654211000 0011123455699999999999888887 9999999999999998887 8889999999874   68


Q ss_pred             EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc--cCceEEE
Q psy7482         199 VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS--ASRIKGL  276 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~  276 (327)
                      +++|+.||.|++||+++++.+..+.+|...|.+++|+  |++.+|++++.|+.|++||++.++.+..+..+  ...+.++
T Consensus       213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~--p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~  290 (354)
T 2pbi_B          213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY--PSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV  290 (354)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred             EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEe--CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEE
Confidence            9999999999999999999999999999999999995  89999999999999999999998877766644  3478999


Q ss_pred             eeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         277 ASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       277 ~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +|+|  .+|++++.||.|++||+..+.    .......|..+|++++|+|+.
T Consensus       291 ~~s~~g~~l~~g~~d~~i~vwd~~~~~----~~~~l~~h~~~v~~l~~spdg  338 (354)
T 2pbi_B          291 DFSLSGRLLFAGYNDYTINVWDVLKGS----RVSILFGHENRVSTLRVSPDG  338 (354)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTTCS----EEEEECCCSSCEEEEEECTTS
T ss_pred             EEeCCCCEEEEEECCCcEEEEECCCCc----eEEEEECCCCcEEEEEECCCC
Confidence            9999  899999999999999998772    122234578899999999973

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.6e-43  Score=291.60  Aligned_cols=276  Identities=17%  Similarity=0.276  Sum_probs=225.1

Q ss_pred             ccccccccccc-cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE--eEEecccCCceeeEEEecCCCEEEEEeCCCC
Q psy7482          45 KQSGALMQHEG-TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK--LFKKAHKGTAVNHISIHPSGKLALSVGKDKT  121 (327)
Q Consensus        45 ~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  121 (327)
                      +++..+.+|.. .|.+++|+|++++|++|+.|++|++||+.++....  .+..+|... |.+++|+|++++|++++.|+.
T Consensus         6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~-v~~~~~sp~g~~l~s~s~D~~   84 (345)
T 3fm0_A            6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRT-VRKVAWSPCGNYLASASFDAT   84 (345)
T ss_dssp             EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSC-EEEEEECTTSSEEEEEETTSC
T ss_pred             EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCc-EEEEEECCCCCEEEEEECCCc
Confidence            45667888987 99999999999999999999999999998876443  232567777 999999999999999999999


Q ss_pred             EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce---eeEec-CCCceeEEEeecC
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV---LQTLK-SESKVHSVCFLNE  196 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~---~~~~~-~~~~i~~~~~~~~  196 (327)
                      +++||+..+.......+..   |...|.+++|+|++++|++++ |+.|++||++.+..   +..+. |...|.+++|+|+
T Consensus        85 v~iw~~~~~~~~~~~~~~~---h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~  161 (345)
T 3fm0_A           85 TCIWKKNQDDFECVTTLEG---HENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS  161 (345)
T ss_dssp             EEEEEECCC-EEEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred             EEEEEccCCCeEEEEEccC---CCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence            9999998765433333333   355699999999999999998 99999999987643   34444 7889999999998


Q ss_pred             -ceEEEeCCCCcEEEEEcCCCc--eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC-------------
Q psy7482         197 -TTVCTGNEESAITAYNLTDGS--HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG-------------  260 (327)
Q Consensus       197 -~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~-------------  260 (327)
                       .+|++++.|+.|++||.+.++  ....+.+|...|.+++|+  |++++|++++.|+.|++||....             
T Consensus       162 ~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s--p~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~  239 (345)
T 3fm0_A          162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD--PSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP  239 (345)
T ss_dssp             SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---C
T ss_pred             CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEEC--CCCCEEEEEeCCCeEEEeccccCCCCccceeeccCC
Confidence             789999999999999998775  356788999999999995  99999999999999999996432             


Q ss_pred             --ceeEEeec-ccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCc--eeee---ecCCCCceEEEEeCCCC
Q psy7482         261 --SHLWHIKA-SASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREP--QRVS---ATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       261 --~~~~~~~~-~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~--~~~~---~~~~~~~i~~l~~~p~~  326 (327)
                        +++..+.+ |...|++++|+|  ..|++++.|+.|++|+.........  ..+.   ...|...|++++|+|+.
T Consensus       240 ~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~  315 (345)
T 3fm0_A          240 SWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE  315 (345)
T ss_dssp             EEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS
T ss_pred             ccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC
Confidence              23344544 888999999999  8999999999999999876531111  1111   13577899999999963

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=7.2e-45  Score=303.49  Aligned_cols=287  Identities=17%  Similarity=0.248  Sum_probs=240.0

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEE
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA  113 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  113 (327)
                      ..+..|+..+..+...+.+|.+.|++++|+|++++|++|+.|++|++||+.+++....+ ..|... |.+++|+|++++|
T Consensus        46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~-~~h~~~-v~~~~~s~~g~~l  123 (380)
T 3iz6_a           46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAI-KLHCPW-VMECAFAPNGQSV  123 (380)
T ss_dssp             GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE-ECCCTT-CCCCEECTTSSEE
T ss_pred             ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEE-ecCCCC-EEEEEECCCCCEE
Confidence            34556777777888899999999999999999999999999999999999999999888 788887 9999999999999


Q ss_pred             EEEeCCCCEEEEEcCCCceeee-e-eccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecCCceeeEec------
Q psy7482         114 LSVGKDKTLRTWNLVKGRSAYI-T-NLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVLQTLK------  183 (327)
Q Consensus       114 ~~~~~dg~i~iwd~~~~~~~~~-~-~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~~------  183 (327)
                      ++++.|+.+++||+.+...... . .......|...+.++.|.|++ ..+++++ |+.|++||+++++.+..+.      
T Consensus       124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~  203 (380)
T 3iz6_a          124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG  203 (380)
T ss_dssp             EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS
T ss_pred             EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC
Confidence            9999999999999875431100 0 011123445668999999974 4577776 9999999999999887762      


Q ss_pred             CCCceeEEEeec-C-ceEEEeCCCCcEEEEEcC-CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482         184 SESKVHSVCFLN-E-TTVCTGNEESAITAYNLT-DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       184 ~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                      |...+.++++++ + .++++|+.|+.|++||++ ..+.+..+.+|...|.+++|+  |++++|++|+.|+.|++||++++
T Consensus       204 h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~--p~~~~l~s~s~D~~i~lwd~~~~  281 (380)
T 3iz6_a          204 HTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF--PDGQRFGTGSDDGTCRLFDMRTG  281 (380)
T ss_dssp             CCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEEC--TTSSEEEEECSSSCEEEEETTTT
T ss_pred             CccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEe--cCCCeEEEEcCCCeEEEEECCCC
Confidence            678899999987 4 789999999999999998 456788899999999999995  99999999999999999999999


Q ss_pred             ceeEEeeccc-------CceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeee--cCCCCceEEEEeCCCC
Q psy7482         261 SHLWHIKASA-------SRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSA--TNDGCRFTCLAIRPPV  326 (327)
Q Consensus       261 ~~~~~~~~~~-------~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~--~~~~~~i~~l~~~p~~  326 (327)
                      +.+..+..+.       ..|++++|+|  ++|++|+.||.|++||+..+.  ....+..  ..|...|++++|+|+.
T Consensus       282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~--~~~~~~~~~~~h~~~v~~l~~s~dg  356 (380)
T 3iz6_a          282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE--MVLNLGTLQNSHEGRISCLGLSSDG  356 (380)
T ss_dssp             EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC--EEEEECCSCSSCCCCCCEEEECSSS
T ss_pred             cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc--eEEEEecccCCCCCceEEEEECCCC
Confidence            9888776543       2489999999  999999999999999998772  2222221  3577899999999974

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-43  Score=298.96  Aligned_cols=276  Identities=11%  Similarity=0.097  Sum_probs=247.8

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      |.+.|.+++|  ++++|++|+.||.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+.+++...
T Consensus       107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~  185 (425)
T 1r5m_A          107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ  185 (425)
T ss_dssp             -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred             CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence            7889999999  899999999999999999 6788888899999999999999999999999999999999999998888


Q ss_pred             eEEecccCCc--------------eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC
Q psy7482          91 LFKKAHKGTA--------------VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        91 ~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  156 (327)
                      .+ ..+....              +.++.|++++ .+++++.+|.|++||+++++....+..     +...+.+++|+|+
T Consensus       186 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~-----~~~~i~~~~~~~~  258 (425)
T 1r5m_A          186 HF-ELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIG-----HHGPISVLEFNDT  258 (425)
T ss_dssp             EE-CCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECC-----CSSCEEEEEEETT
T ss_pred             Ee-eccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeecc-----CCCceEEEEECCC
Confidence            77 3333211              8889999875 688899999999999998877655432     2345999999999


Q ss_pred             CcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482         157 GLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF  234 (327)
Q Consensus       157 ~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  234 (327)
                      ++++++++ |+.|++||+++++....+. +...+.+++|+|++.+++++.|+.|++||+++++.+..+..|..++.+++|
T Consensus       259 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~  338 (425)
T 1r5m_A          259 NKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRI  338 (425)
T ss_dssp             TTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEE
T ss_pred             CCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEE
Confidence            99999887 9999999999999888887 889999999999999999999999999999999999999999999999999


Q ss_pred             EecCCCcEEEEecCCCeEEEEEcCCCc--------------------eeEEeecccC--ceEEEeeeC--cEEEEEecCC
Q psy7482         235 FSIPQETTVCTGNEESAITAYNLTDGS--------------------HLWHIKASAS--RIKGLASHR--NHLICITSAG  290 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d~~i~i~d~~~~~--------------------~~~~~~~~~~--~v~~~~~~~--~~l~~~~~dg  290 (327)
                      +  |++++|++++.||.|++||+.+++                    ++..+..|..  .|.+++|+|  ++|++++.||
T Consensus       339 s--~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg  416 (425)
T 1r5m_A          339 S--QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ  416 (425)
T ss_dssp             C--TTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred             c--CCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence            5  999999999999999999999888                    8899999976  999999999  8999999999


Q ss_pred             cEEEEEcc
Q psy7482         291 DLVVWELN  298 (327)
Q Consensus       291 ~v~iw~~~  298 (327)
                      .|++|+++
T Consensus       417 ~i~iw~~~  424 (425)
T 1r5m_A          417 EGSVVAIP  424 (425)
T ss_dssp             CCEEEECC
T ss_pred             eEEEEeec
Confidence            99999986

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=9.7e-44  Score=291.93  Aligned_cols=302  Identities=12%  Similarity=0.205  Sum_probs=253.7

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      .-|.++|.+++|  +|++++++..++.+..|+...........+|...|++++|+|++++|++++ ||.|++||+.+++.
T Consensus         6 ~~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~   84 (337)
T 1gxr_A            6 AMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGN   84 (337)
T ss_dssp             EEEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTC
T ss_pred             cccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCc
Confidence            346788999999  999999988888787776665554445557999999999999999999999 99999999987653


Q ss_pred             EEeEE--e--cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          89 EKLFK--K--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        89 ~~~~~--~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      ...+.  .  .|... |.+++|+|++++|++++.||.|++||+++++.........+   ...+.+++|+|+++++++++
T Consensus        85 ~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~  160 (337)
T 1gxr_A           85 KSPVSQLDCLNRDNY-IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS---APACYALAISPDSKVCFSCC  160 (337)
T ss_dssp             CSCSEEEECSCTTSB-EEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECS---SSCEEEEEECTTSSEEEEEE
T ss_pred             eeeeecccccCCCCc-EEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccC---CCceEEEEECCCCCEEEEEe
Confidence            33221  1  45665 99999999999999999999999999998774333333322   34599999999999999887


Q ss_pred             -CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCc
Q psy7482         165 -QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET  241 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~  241 (327)
                       ++.|++||+++++.+..+. |...+.+++|+|+ .++++++.|+.|++||+++++.+..+. +...+.+++|+  |+++
T Consensus       161 ~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s--~~~~  237 (337)
T 1gxr_A          161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC--PTGE  237 (337)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC--TTSS
T ss_pred             CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEEC--CCCC
Confidence             8999999999999988887 7889999999998 789999999999999999998877764 67789999994  9999


Q ss_pred             EEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEE
Q psy7482         242 TVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTC  319 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~  319 (327)
                      ++++++.|+.|++||+.+++. ..+..|...|.+++|+|  ++|++++.||.|++|++..+.   .  +....+...|++
T Consensus       238 ~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~---~--~~~~~~~~~v~~  311 (337)
T 1gxr_A          238 WLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA---S--IFQSKESSSVLS  311 (337)
T ss_dssp             EEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---E--EEEEECSSCEEE
T ss_pred             EEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe---E--EEEecCCCcEEE
Confidence            999999999999999988765 46778999999999999  899999999999999999882   2  233456788999


Q ss_pred             EEeCCCC
Q psy7482         320 LAIRPPV  326 (327)
Q Consensus       320 l~~~p~~  326 (327)
                      ++|+|+.
T Consensus       312 ~~~s~~~  318 (337)
T 1gxr_A          312 CDISVDD  318 (337)
T ss_dssp             EEECTTS
T ss_pred             EEECCCC
Confidence            9999974

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=3.5e-43  Score=320.87  Aligned_cols=288  Identities=18%  Similarity=0.249  Sum_probs=255.6

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEE
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIA   79 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~   79 (327)
                      +++.+.+.  +|.+.|.+++|  ++++||+|+.||.|++||+.+++.+..+.+|..+|++++|+|++++|++++.||.|+
T Consensus         3 l~~~~~~~--~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~   80 (814)
T 3mkq_A            3 LDIKKTFS--NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR   80 (814)
T ss_dssp             CCCEEEEE--EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred             cccceeee--cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence            44555554  89999999999  899999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEcc-CC
Q psy7482          80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSP-EG  157 (327)
Q Consensus        80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~-~~  157 (327)
                      +||+.+++....+ ..|... |.+++|+|++++|++++.||.|++||++++ ........     +...+.+++|+| ++
T Consensus        81 vw~~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-----~~~~v~~~~~~p~~~  153 (814)
T 3mkq_A           81 VFNYNTGEKVVDF-EAHPDY-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-----HEHFVMCVAFNPKDP  153 (814)
T ss_dssp             EEETTTCCEEEEE-ECCSSC-EEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-----CSSCEEEEEEETTEE
T ss_pred             EEECCCCcEEEEE-ecCCCC-EEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-----CCCcEEEEEEEcCCC
Confidence            9999999999888 788887 999999999999999999999999999876 33333322     234599999999 78


Q ss_pred             cEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeec--C-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEE
Q psy7482         158 LLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLN--E-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKG  231 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~--~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~  231 (327)
                      ..+++++ |+.|++||+.+++....+.  +...+.+++|+|  + .++++++.||.|++||+++++.+..+.+|...+.+
T Consensus       154 ~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~  233 (814)
T 3mkq_A          154 STFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF  233 (814)
T ss_dssp             EEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence            8888887 9999999999888777776  448899999998  6 78999999999999999999999999999999999


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCc
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++|+  |+++++++++.||.|++||+.+++.+..+..|...+.+++|+|   ..+++++.++.+.+|++...
T Consensus       234 ~~~~--~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (814)
T 3mkq_A          234 AVFH--PTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND  303 (814)
T ss_dssp             EEEC--SSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred             EEEc--CCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence            9995  9999999999999999999999999999999999999999999   33455556778889987654

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=4.5e-43  Score=333.24  Aligned_cols=306  Identities=16%  Similarity=0.240  Sum_probs=265.7

Q ss_pred             eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC
Q psy7482           7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG   84 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~   84 (327)
                      .+.+.+|.+.|++++|  ++++||+|+.||+|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.
T Consensus       608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~  687 (1249)
T 3sfz_A          608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA  687 (1249)
T ss_dssp             SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence            3456799999999999  99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          85 SWQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      +++.+..+ .+|... |.+++|+|  ++.++++++.||.|++||+++++....+..     |...|.+++|+|+++++++
T Consensus       688 ~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-----h~~~v~~~~~sp~~~~l~s  760 (1249)
T 3sfz_A          688 TGKLVHTY-DEHSEQ-VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG-----HTNSVNHCRFSPDDELLAS  760 (1249)
T ss_dssp             TCCEEEEE-ECCSSC-EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC-----CSSCEEEEEECSSTTEEEE
T ss_pred             CCceEEEE-cCCCCc-EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC-----CCCCEEEEEEecCCCEEEE
Confidence            99999998 788887 99999999  556899999999999999999887655432     3455999999999999999


Q ss_pred             ec-CCeEEEEEecCCceeeEe--------------------------------------------------------cCC
Q psy7482         163 PI-QNKAVVFSVEKAGVLQTL--------------------------------------------------------KSE  185 (327)
Q Consensus       163 ~~-~~~i~i~d~~~~~~~~~~--------------------------------------------------------~~~  185 (327)
                      ++ ||.|++||+++++....+                                                        .+.
T Consensus       761 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~  840 (1249)
T 3sfz_A          761 CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH  840 (1249)
T ss_dssp             EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS
T ss_pred             EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC
Confidence            87 999999998876543322                                                        245


Q ss_pred             CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC------
Q psy7482         186 SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT------  258 (327)
Q Consensus       186 ~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~------  258 (327)
                      ..+.+++|+|+ ..+++++.++.|++||+.++..+..+.+|...|.+++|+  |+++++++++.|+.|++||+.      
T Consensus       841 ~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~s--pdg~~l~s~s~dg~v~vw~~~~~~~~~  918 (1249)
T 3sfz_A          841 STIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFS--PDGSSFLTASDDQTIRVWETKKVCKNS  918 (1249)
T ss_dssp             SCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEEHHHHHSCC
T ss_pred             CceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEEC--CCCCEEEEEeCCCeEEEEEccccceee
Confidence            67889999998 889999999999999999999999999999999999994  889889988888888888743      


Q ss_pred             -------------------------------------------------------------------------CCceeEE
Q psy7482         259 -------------------------------------------------------------------------DGSHLWH  265 (327)
Q Consensus       259 -------------------------------------------------------------------------~~~~~~~  265 (327)
                                                                                               +++....
T Consensus       919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~  998 (1249)
T 3sfz_A          919 AIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSS  998 (1249)
T ss_dssp             SSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEE
T ss_pred             eecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeee
Confidence                                                                                     2334455


Q ss_pred             eecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         266 IKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       266 ~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +.+|...|++++|+|  ++|++++.||.|++|++.++     .......+...|.+++|+|+.
T Consensus       999 ~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~-----~~~~~~~~~~~v~~~~~~~~~ 1056 (1249)
T 3sfz_A          999 GVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTG-----DYVFLQAHQETVKDFRLLQDS 1056 (1249)
T ss_dssp             CCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTT-----EEECCBCCSSCEEEEEECSSS
T ss_pred             cccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-----ceEEEecCCCcEEEEEEcCCC
Confidence            667888999999999  89999999999999999887     233345677889999999863

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=5.1e-43  Score=294.59  Aligned_cols=283  Identities=14%  Similarity=0.203  Sum_probs=241.7

Q ss_pred             EeeeeccCCcc--EEEEEeCCCEEEEecCCCeEEEEEcccccccccccc-ccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482           6 QTFVTHSHTAS--VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         6 ~~~~~~~h~~~--v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      +.+...+|...  +.+++|+++.+++++.|+.|++||+.+++....+.. |...|++++|+|++++|++|+.||.|++||
T Consensus        83 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd  162 (401)
T 4aez_A           83 RVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYD  162 (401)
T ss_dssp             EEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence            34455566654  555777777888899999999999999988777665 789999999999999999999999999999


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      +.+++....+ ..|... |.+++|+  ++++++++.||.|++||++.. .....+..     +...+.+++|+|++++++
T Consensus       163 ~~~~~~~~~~-~~~~~~-v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~  233 (401)
T 4aez_A          163 VESQTKLRTM-AGHQAR-VGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQG-----HSSEVCGLAWRSDGLQLA  233 (401)
T ss_dssp             TTTCCEEEEE-CCCSSC-EEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEEC-----CSSCEEEEEECTTSSEEE
T ss_pred             CcCCeEEEEe-cCCCCc-eEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcC-----CCCCeeEEEEcCCCCEEE
Confidence            9999999888 788887 9999995  679999999999999999854 33333322     244599999999999999


Q ss_pred             eec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC--ceEEEeC--CCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         162 IPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE--TTVCTGN--EESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~--~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                      +++ |+.|++||+++++....+. +...|.+++|+|+  .++++++  .|+.|++||+++++.+..+. +...+.+++|+
T Consensus       234 s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s  312 (401)
T 4aez_A          234 SGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWS  312 (401)
T ss_dssp             EEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEC
T ss_pred             EEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEEC
Confidence            987 8999999999999888886 8899999999996  5666654  79999999999999888886 56779999995


Q ss_pred             ecCCCcEEEE--ecCCCeEEEEEcCCCcee--EEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         236 SIPQETTVCT--GNEESAITAYNLTDGSHL--WHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       236 ~s~~~~~l~~--~~~d~~i~i~d~~~~~~~--~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                        |+++++++  |+.||.|++||+.+++..  ..+.+|...|.+++|+|  .+|++++.||.|++|++..+
T Consensus       313 --~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~  381 (401)
T 4aez_A          313 --PHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG  381 (401)
T ss_dssp             --SSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred             --CCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence              89999998  668999999999987644  45779999999999999  89999999999999999987

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=8e-43  Score=283.72  Aligned_cols=269  Identities=16%  Similarity=0.247  Sum_probs=233.5

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      .....+.+|...|++++|+|++++|++++.||.|++|++.+++....+ .+|... |.+++|+|++++|++++.||.|++
T Consensus        14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~~~d~~i~v   91 (312)
T 4ery_A           14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKLG-ISDVAWSSDSNLLVSASDDKTLKI   91 (312)
T ss_dssp             EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEE
T ss_pred             eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh-ccCCCc-eEEEEEcCCCCEEEEECCCCEEEE
Confidence            445677899999999999999999999999999999999999988888 788887 999999999999999999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEE
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCT  201 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~  201 (327)
                      ||+++++....+..+     ...+.+++|+|+++++++++ |+.|++||+++++.+..+. |..++.+++|+|+ .++++
T Consensus        92 wd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  166 (312)
T 4ery_A           92 WDVSSGKCLKTLKGH-----SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS  166 (312)
T ss_dssp             EETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred             EECCCCcEEEEEcCC-----CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence            999998876655433     34599999999999999987 9999999999999988887 7889999999998 78999


Q ss_pred             eCCCCcEEEEEcCCCceeEEee-ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEE--ee
Q psy7482         202 GNEESAITAYNLTDGSHLWQIK-ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGL--AS  278 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~--~~  278 (327)
                      ++.|+.|++||+++++.+..+. .+..++..++|.  |++++|++++.|+.|++||+.+++.+..+.+|...+..+  .+
T Consensus       167 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  244 (312)
T 4ery_A          167 SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS--PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF  244 (312)
T ss_dssp             EETTSCEEEEETTTCCEEEEECCSSCCCEEEEEEC--TTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred             EeCCCcEEEEECCCCceeeEEeccCCCceEEEEEC--CCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence            9999999999999998877764 456689999994  999999999999999999999999999999887654433  34


Q ss_pred             eC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         279 HR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       279 ~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ++   .+|++|+.||.|++||+..+.   . ......|...|.+++|+|+.
T Consensus       245 ~~~~~~~l~sg~~dg~i~vwd~~~~~---~-~~~~~~h~~~v~~~~~~p~~  291 (312)
T 4ery_A          245 SVTGGKWIVSGSEDNLVYIWNLQTKE---I-VQKLQGHTDVVISTACHPTE  291 (312)
T ss_dssp             ECSSSCEEEECCTTSCEEEEETTTCC---E-EEEECCCSSCEEEEEECSSS
T ss_pred             EeCCCcEEEEECCCCEEEEEECCCch---h-hhhhhccCCcEEEEeecCcC
Confidence            33   789999999999999998872   2 12223577889999999974

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=5.5e-45  Score=304.19  Aligned_cols=277  Identities=17%  Similarity=0.224  Sum_probs=223.2

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc--ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKR--KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      .|.++|++++|  ++++||+|+.|+.|++||+.++  +....+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus         9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~   88 (377)
T 3dwl_C            9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG   88 (377)
T ss_dssp             ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred             cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence            47789999999  8999999999999999999988  7888999999999999999999999999999999999999876


Q ss_pred             ---EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce---eeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          88 ---LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS---AYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        88 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                         ....+ ..|... |.+++|+|++++|++++.|+.|++||+++++.   ...+..    .+...+.+++|+|++++++
T Consensus        89 ~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~  162 (377)
T 3dwl_C           89 TWKQTLVL-LRLNRA-ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR----PLRSTILSLDWHPNNVLLA  162 (377)
T ss_dssp             CCCCEEEC-CCCSSC-EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS----SCCSCEEEEEECTTSSEEE
T ss_pred             ceeeeeEe-cccCCc-eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec----ccCCCeEEEEEcCCCCEEE
Confidence               44555 567777 99999999999999999999999999988763   222221    1345699999999999999


Q ss_pred             eec-CCeEEEEEec------------------CCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce---
Q psy7482         162 IPI-QNKAVVFSVE------------------KAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH---  218 (327)
Q Consensus       162 ~~~-~~~i~i~d~~------------------~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~---  218 (327)
                      +++ |+.|++||++                  .++.+..+.|...|.+++|+|+ .++++++.|+.|++||+++++.   
T Consensus       163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~  242 (377)
T 3dwl_C          163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR  242 (377)
T ss_dssp             EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred             EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence            987 9999999995                  2445555568889999999999 7899999999999999999987   


Q ss_pred             -eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc--e-------------------------e-------
Q psy7482         219 -LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS--H-------------------------L-------  263 (327)
Q Consensus       219 -~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~--~-------------------------~-------  263 (327)
                       +..+..|..+|.+++|+  |++++|++++.++.+ +|+.....  .                         .       
T Consensus       243 ~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (377)
T 3dwl_C          243 ALITVKLSQLPLRSLLWA--NESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTA  319 (377)
T ss_dssp             ECCCEECSSSCEEEEEEE--ETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--------
T ss_pred             eeEeecCCCCceEEEEEc--CCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccc
Confidence             78889999999999996  899999999877766 66554211  0                         0       


Q ss_pred             --EEe----------------ecccCceEEEeeeC---c---EEEEEecCCcEEEEEc
Q psy7482         264 --WHI----------------KASASRIKGLASHR---N---HLICITSAGDLVVWEL  297 (327)
Q Consensus       264 --~~~----------------~~~~~~v~~~~~~~---~---~l~~~~~dg~v~iw~~  297 (327)
                        ..+                ..|.+.|+++++.+   .   .|+|++.||.|++||+
T Consensus       320 ~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          320 LRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             -----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             ccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence              011                12889999999776   2   6999999999999985

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=4.1e-43  Score=296.99  Aligned_cols=272  Identities=16%  Similarity=0.192  Sum_probs=235.2

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCcee
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN  102 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  102 (327)
                      ++++|++|+.||.|++||+.+++....+.+|...|++++|+|++++|++++.|+.|++||+.+++....+ .+|... |.
T Consensus       108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~h~~~-v~  185 (420)
T 3vl1_A          108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL-IGHRAT-VT  185 (420)
T ss_dssp             SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE-ECCSSC-EE
T ss_pred             CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE-cCCCCc-EE
Confidence            8999999999999999999999998888899999999999999999999999999999999999998888 788888 99


Q ss_pred             eEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC-------------------ccccceEEEEEccCCcEEEee
Q psy7482         103 HISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG-------------------VGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus       103 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      +++|+|++++|++++.||.|++||+++++....+......                   .+...+.+++|+|++++++++
T Consensus       186 ~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~  265 (420)
T 3vl1_A          186 DIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG  265 (420)
T ss_dssp             EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE
T ss_pred             EEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE
Confidence            9999999999999999999999999998877666543211                   011335556668899999988


Q ss_pred             c-CCeEEEEEecCCceeeEec--CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCce-eEEeee-cccceEEEEEEe
Q psy7482         164 I-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSH-LWQIKA-SASRIKGLVFFS  236 (327)
Q Consensus       164 ~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~-~~~~~~-~~~~v~~~~~~~  236 (327)
                      + ||.|++||+++++....+.  +...+.+++|+|+ . ++++++.||.|++||+++++. +..+.. |...+.++.+  
T Consensus       266 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~--  343 (420)
T 3vl1_A          266 HVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF--  343 (420)
T ss_dssp             ETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE--
T ss_pred             cCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe--
Confidence            7 9999999999998887776  6789999999998 5 899999999999999998754 677776 6677888866  


Q ss_pred             cCCCcEEEEecCCCeEEEEEcCCCc---------eeEEeecccCceEEEeeeC--c---EEEEEecCCcEEEEEccC
Q psy7482         237 IPQETTVCTGNEESAITAYNLTDGS---------HLWHIKASASRIKGLASHR--N---HLICITSAGDLVVWELNE  299 (327)
Q Consensus       237 s~~~~~l~~~~~d~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~--~---~l~~~~~dg~v~iw~~~~  299 (327)
                       +++++|++++.|+.|++|++....         ....+..|...|.+++|+|  .   .+++++.+|.+.+|+++.
T Consensus       344 -~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~  419 (420)
T 3vl1_A          344 -AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN  419 (420)
T ss_dssp             -ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred             -CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence             688999999999999999988742         2334667888999999999  5   688888999999999865

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-42  Score=283.01  Aligned_cols=274  Identities=14%  Similarity=0.193  Sum_probs=215.7

Q ss_pred             ccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC--eEEEeEEec-ccCCceeeEEEecCCCEEEEEeCC
Q psy7482          43 KRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKLFKKA-HKGTAVNHISIHPSGKLALSVGKD  119 (327)
Q Consensus        43 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d  119 (327)
                      +.+++..+.+|.++|.+++|+|+  +|++|+.|+.|++||+..+  +....+... |... |.+++|+|++++|++++.|
T Consensus         3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~-v~~v~~sp~~~~las~s~D   79 (330)
T 2hes_X            3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKA-IRSVAWRPHTSLLAAGSFD   79 (330)
T ss_dssp             CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSC-EEEEEECTTSSEEEEEETT
T ss_pred             ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCC-EEEEEECCCCCEEEEEeCC
Confidence            44566788899999999999987  9999999999999999875  344444233 7776 9999999999999999999


Q ss_pred             CCEEEEEcCCCcee--eeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC----ceeeEec-CCCceeEE
Q psy7482         120 KTLRTWNLVKGRSA--YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA----GVLQTLK-SESKVHSV  191 (327)
Q Consensus       120 g~i~iwd~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~----~~~~~~~-~~~~i~~~  191 (327)
                      +.|++||++.....  ..........|...|.+++|+|++++|++++ |+.|++||++..    +.+..+. |...|.++
T Consensus        80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v  159 (330)
T 2hes_X           80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV  159 (330)
T ss_dssp             SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred             CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence            99999998643210  0000111123456799999999999999998 999999999532    3455665 88899999


Q ss_pred             EeecC-ceEEEeCCCCcEEEEEcCCC--ceeEEeeecccceEEEEEEecCC--CcEEEEecCCCeEEEEEcCCC------
Q psy7482         192 CFLNE-TTVCTGNEESAITAYNLTDG--SHLWQIKASASRIKGLVFFSIPQ--ETTVCTGNEESAITAYNLTDG------  260 (327)
Q Consensus       192 ~~~~~-~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~------  260 (327)
                      +|+|+ .+|++++.|+.|++||..++  +++..+.+|...|.+++|+  |+  +.+|++++.|+.|++||+..+      
T Consensus       160 ~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~  237 (330)
T 2hes_X          160 IWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFD--KTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ  237 (330)
T ss_dssp             EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC--CSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred             EECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEec--CCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence            99998 89999999999999998776  5778889999999999996  66  778999999999999998764      


Q ss_pred             --ceeEEeec-ccCceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceeeee--cCCCC-ceEEEEeCC
Q psy7482         261 --SHLWHIKA-SASRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRVSA--TNDGC-RFTCLAIRP  324 (327)
Q Consensus       261 --~~~~~~~~-~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~--~~~~~-~i~~l~~~p  324 (327)
                        .....+.. |...|++++|++ .+|++++.||.|++|+...+   ....+..  ..|.. .|++++|+|
T Consensus       238 ~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~---~~~~~~~~~~~h~~~~v~~v~~~~  305 (330)
T 2hes_X          238 EWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDG---EWKVFAKRALCHGVYEINVVKWLE  305 (330)
T ss_dssp             EEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETT---EEEEEEEESCTTTTSCEEEEEEC-
T ss_pred             eeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCC---ceEEEeccccccccceEEEEEEec
Confidence              34455554 889999999999 89999999999999999766   2222221  33554 899999998

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-44  Score=304.93  Aligned_cols=287  Identities=13%  Similarity=0.169  Sum_probs=243.5

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccc----cccccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEc
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVK----RKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRV   83 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~   83 (327)
                      ..|...|.+++|  ++++|++|+.||.|++||+.+    .+....+.+|...|++++|+|+ +++|++++.|+.|++||+
T Consensus        64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~  143 (416)
T 2pm9_A           64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM  143 (416)
T ss_dssp             CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred             EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence            368999999999  899999999999999999987    3577888899999999999998 899999999999999999


Q ss_pred             CCCe------EEEeE--EecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeecccc-CccccceEEEEE
Q psy7482          84 GSWQ------LEKLF--KKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSY-GVGFENLDSVVW  153 (327)
Q Consensus        84 ~~~~------~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~  153 (327)
                      .+++      ....+  ...|... |.+++|+|+ +.+|++++.||.|++||+++++....+..... ..+...+.+++|
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~  222 (416)
T 2pm9_A          144 NKCTESPSNYTPLTPGQSMSSVDE-VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEW  222 (416)
T ss_dssp             TTTSSCTTTCCCBCCCCSCCSSCC-CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEE
T ss_pred             CCCccccccccccccccccCCCCC-eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEE
Confidence            8876      22221  1456666 999999998 78999999999999999999887766655421 112345999999


Q ss_pred             ccCC-cEEEeec-CC---eEEEEEecCC-ceeeEec--CCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCceeEEee
Q psy7482         154 SPEG-LLYAIPI-QN---KAVVFSVEKA-GVLQTLK--SESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGSHLWQIK  223 (327)
Q Consensus       154 ~~~~-~~l~~~~-~~---~i~i~d~~~~-~~~~~~~--~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~~~~~~~  223 (327)
                      +|++ .++++++ ++   .|++||++++ +....+.  |...|.+++|+| + .++++++.|+.|++||+++++.+..+.
T Consensus       223 ~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~  302 (416)
T 2pm9_A          223 HPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP  302 (416)
T ss_dssp             CSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred             CCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence            9997 5777776 77   9999999986 5666665  788999999999 6 789999999999999999999999999


Q ss_pred             ecccceEEEEEEecCCC-cEEEEecCCCeEEEEEcCCCceeEEeec----------------------------------
Q psy7482         224 ASASRIKGLVFFSIPQE-TTVCTGNEESAITAYNLTDGSHLWHIKA----------------------------------  268 (327)
Q Consensus       224 ~~~~~v~~~~~~~s~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~----------------------------------  268 (327)
                      .|...|.+++|+  |++ .+|++++.|+.|++||+.++........                                  
T Consensus       303 ~~~~~v~~~~~s--~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (416)
T 2pm9_A          303 ARGNWCFKTKFA--PEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPT  380 (416)
T ss_dssp             CSSSCCCCEEEC--TTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCS
T ss_pred             CCCCceEEEEEC--CCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCc
Confidence            999999999995  888 8999999999999999987663322211                                  


Q ss_pred             -ccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         269 -SASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       269 -~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                       |..++.+++|+|  ++|++++.||.|+||++.++
T Consensus       381 ~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          381 WYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS  415 (416)
T ss_dssp             TTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred             cccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence             567788999999  89999999999999999865

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.4e-43  Score=296.34  Aligned_cols=278  Identities=12%  Similarity=0.203  Sum_probs=230.2

Q ss_pred             ccCCccEEEEEe---CCCEEEEecCCCeEEEEEccc---ccccc-ccc-cccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482          11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVK---RKQSG-ALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus        11 ~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~---~~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      .+|.+.|++++|   ++++||+|+.||+|++||+.+   +.... .+. .|...|++++|+|++++|++++.||.|++||
T Consensus        60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd  139 (437)
T 3gre_A           60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLK  139 (437)
T ss_dssp             TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence            689999999999   578999999999999999987   33221 222 5899999999999999999999999999999


Q ss_pred             cC---CCeEEEeEEec------------ccCCceeeEE--EecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc
Q psy7482          83 VG---SWQLEKLFKKA------------HKGTAVNHIS--IHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF  145 (327)
Q Consensus        83 ~~---~~~~~~~~~~~------------~~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  145 (327)
                      ++   +++....+ ..            +... +.++.  +++++.+|++++.||.|++||+++++....+....   +.
T Consensus       140 ~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---h~  214 (437)
T 3gre_A          140 VNHYQQESEVKFL-NCECIRKINLKNFGKNEY-AVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP---RH  214 (437)
T ss_dssp             EEEEEETTEEEEE-EEEEEEEEEGGGGSSCCC-EEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG---GG
T ss_pred             eccccCCceeecc-ccceeEEEEccCcccccC-ceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC---CC
Confidence            94   44444333 11            2233 66666  55789999999999999999999998877665432   23


Q ss_pred             cceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeec----C-ceEEEeCCCCcEEEEEcCCCc
Q psy7482         146 ENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLN----E-TTVCTGNEESAITAYNLTDGS  217 (327)
Q Consensus       146 ~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~----~-~~l~~~~~d~~i~i~d~~~~~  217 (327)
                      ..|.+++|+|+++++++++ ||.|++||+++++.+..+.  +..+|.+++|+|    + .++++++.||.|++||+++++
T Consensus       215 ~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~  294 (437)
T 3gre_A          215 GAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH  294 (437)
T ss_dssp             CCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred             CceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence            4599999999999999987 9999999999999988874  677899996665    4 489999999999999999998


Q ss_pred             eeEEeee--------------------------cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec---
Q psy7482         218 HLWQIKA--------------------------SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA---  268 (327)
Q Consensus       218 ~~~~~~~--------------------------~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---  268 (327)
                      .+..+.+                          |...|.+++|.   ++++|++|+.|+.|++||+.+++.+..+.+   
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~---~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~  371 (437)
T 3gre_A          295 CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS---NDKILLTDEATSSIVMFSLNELSSSKAVISPSR  371 (437)
T ss_dssp             EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE---TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred             EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC---CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence            8777653                          55568888883   679999999999999999999987777665   


Q ss_pred             ----------------------------------ccCceEEEeeeC----cEEEEEecCCcEEEEE
Q psy7482         269 ----------------------------------SASRIKGLASHR----NHLICITSAGDLVVWE  296 (327)
Q Consensus       269 ----------------------------------~~~~v~~~~~~~----~~l~~~~~dg~v~iw~  296 (327)
                                                        |...|++++|.+    .+|++|+.||.|+||+
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          372 FSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred             cCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence                                              788999999987    4999999999999995

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.2e-41  Score=280.34  Aligned_cols=271  Identities=17%  Similarity=0.203  Sum_probs=218.1

Q ss_pred             ccccccccccccEEEEEE-----CC-CCCeEEEecCCCcEEEEEcCCC-------eEEEeEEecccCCceeeEEEecCCC
Q psy7482          45 KQSGALMQHEGTITCLKF-----TP-EGSHLISCSDDGSIAIFRVGSW-------QLEKLFKKAHKGTAVNHISIHPSGK  111 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~-----~~-~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~  111 (327)
                      +....+.+|.+.|++++|     ++ ++++|++|+.|++|++||+.+.       .....+ .+|... |.+++|+|++.
T Consensus        12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l-~~h~~~-V~~~~~~~~~~   89 (343)
T 2xzm_R           12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKAL-TGHNHF-VSDLALSQENC   89 (343)
T ss_dssp             EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEE-CCCSSC-EEEEEECSSTT
T ss_pred             eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchh-ccCCCc-eEEEEECCCCC
Confidence            455678899999999999     76 8999999999999999999753       345556 788887 99999999999


Q ss_pred             EEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe---cCCCc
Q psy7482         112 LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL---KSESK  187 (327)
Q Consensus       112 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~---~~~~~  187 (327)
                      ++++++.|+.|++||+++++....+..     |...|.+++|+|+++++++++ |+.|++||+.........   .|...
T Consensus        90 ~l~s~s~D~~v~lwd~~~~~~~~~~~~-----h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~  164 (343)
T 2xzm_R           90 FAISSSWDKTLRLWDLRTGTTYKRFVG-----HQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDW  164 (343)
T ss_dssp             EEEEEETTSEEEEEETTSSCEEEEEEC-----CCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSC
T ss_pred             EEEEEcCCCcEEEEECCCCcEEEEEcC-----CCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCce
Confidence            999999999999999999887665543     244599999999999999887 999999999854333332   36788


Q ss_pred             eeEEEeecC-----------ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482         188 VHSVCFLNE-----------TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       188 i~~~~~~~~-----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                      +.+++|+|+           .++++++.|+.|++|| ...+....+.+|...|.+++|+  |++++|++|+.|+.|++||
T Consensus       165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s--~~g~~l~sgs~dg~v~iwd  241 (343)
T 2xzm_R          165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSIS--PNGKYIATGGKDKKLLIWD  241 (343)
T ss_dssp             EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEEC--TTSSEEEEEETTCEEEEEE
T ss_pred             eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEEC--CCCCEEEEEcCCCeEEEEE
Confidence            999999987           3799999999999999 4566777889999999999994  9999999999999999999


Q ss_pred             cCCCc-eeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceeee---------ecCCCCceEEEEeCCC
Q psy7482         257 LTDGS-HLWHIKASASRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRVS---------ATNDGCRFTCLAIRPP  325 (327)
Q Consensus       257 ~~~~~-~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~---------~~~~~~~i~~l~~~p~  325 (327)
                      +.+.. ....+ .+...|.+++|+| ..+++++.|+.|++|++.+........+.         ...+...|++++|+|+
T Consensus       242 ~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~  320 (343)
T 2xzm_R          242 ILNLTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNAL  320 (343)
T ss_dssp             SSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSS
T ss_pred             CCCCcccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCC
Confidence            95443 44444 3456799999999 44555667999999999876311111111         0135677999999997


Q ss_pred             C
Q psy7482         326 V  326 (327)
Q Consensus       326 ~  326 (327)
                      .
T Consensus       321 g  321 (343)
T 2xzm_R          321 G  321 (343)
T ss_dssp             S
T ss_pred             C
Confidence            3

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=3.3e-43  Score=298.69  Aligned_cols=280  Identities=14%  Similarity=0.214  Sum_probs=220.4

Q ss_pred             ccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccccc--cccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcC
Q psy7482          11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQS--GALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVG   84 (327)
Q Consensus        11 ~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~   84 (327)
                      .+|...|+||+|   ++++||+|+.||.|+|||+.+++..  ..+.+|.+.|++++|+| ++++|++|+.||+|++||++
T Consensus       116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~  195 (435)
T 4e54_B          116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK  195 (435)
T ss_dssp             EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred             CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence            478999999999   5679999999999999999876543  45568999999999998 68899999999999999998


Q ss_pred             CCeEEEeEEeccc-CCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-EEEe
Q psy7482          85 SWQLEKLFKKAHK-GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-LYAI  162 (327)
Q Consensus        85 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~  162 (327)
                      ++...... ..+. ...+.+++|+|++++|++|+.||.|++||++.. .+..+     ..|...|.+++|+|++. ++++
T Consensus       196 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~-----~~h~~~v~~v~~~p~~~~~~~s  268 (435)
T 4e54_B          196 GNILRVFA-SSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNL-----RMHKKKVTHVALNPCCDWFLAT  268 (435)
T ss_dssp             SCEEEEEE-CCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCS-----BCCSSCEEEEEECTTCSSEEEE
T ss_pred             CCceeEEe-ccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEE-----ecccceEEeeeecCCCceEEEE
Confidence            76544333 3222 223789999999999999999999999998643 32222     23455699999999886 6767


Q ss_pred             ec-CCeEEEEEecCCceeeEe----cCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccc------eE
Q psy7482         163 PI-QNKAVVFSVEKAGVLQTL----KSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASR------IK  230 (327)
Q Consensus       163 ~~-~~~i~i~d~~~~~~~~~~----~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~------v~  230 (327)
                      ++ |+.|++||+++.+....+    .|...|.+++|+|+ .+|++++.||.|++||+++++....+..|...      +.
T Consensus       269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  348 (435)
T 4e54_B          269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI  348 (435)
T ss_dssp             EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred             ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence            76 999999999887654433    37889999999999 89999999999999999998877776655431      22


Q ss_pred             EEEEEecCCCcEEEEec------------CCCeEEEEEcCCCceeEEee-cccCceEEE-eeeC--cEEEEEecCCcEEE
Q psy7482         231 GLVFFSIPQETTVCTGN------------EESAITAYNLTDGSHLWHIK-ASASRIKGL-ASHR--NHLICITSAGDLVV  294 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~-~~~~--~~l~~~~~dg~v~i  294 (327)
                      ...|+  |++.++++++            .++.|++||..+++.+..+. +|...|.++ +|+|  .+|++|+ |+.|+|
T Consensus       349 ~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~i  425 (435)
T 4e54_B          349 KAAWH--PRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILI  425 (435)
T ss_dssp             BCEEC--SSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEE
T ss_pred             EEEEc--CCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEE
Confidence            33442  5565555543            34679999999999888765 677888887 6999  7777765 889999


Q ss_pred             EEccCc
Q psy7482         295 WELNED  300 (327)
Q Consensus       295 w~~~~~  300 (327)
                      |+++++
T Consensus       426 W~~~~g  431 (435)
T 4e54_B          426 WSQQEA  431 (435)
T ss_dssp             CCCC--
T ss_pred             EECCcC
Confidence            999887

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=7.4e-43  Score=289.40  Aligned_cols=276  Identities=11%  Similarity=0.131  Sum_probs=220.4

Q ss_pred             CccEEEEEe--CCCEEEEecCC-------CeEEEEEccccccc----------cccccccccEEEEEECCCCCeEEEe--
Q psy7482          14 TASVRSVAA--TSKLAASSGAD-------ETVVLYDMVKRKQS----------GALMQHEGTITCLKFTPEGSHLISC--   72 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~d-------g~v~~w~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~l~~~--   72 (327)
                      .-+|.+++|  ++++|++|+.+       +.|++|++......          ..+..|...|.++++.  ++.+++|  
T Consensus        14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~   91 (365)
T 4h5i_A           14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN   91 (365)
T ss_dssp             SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred             CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence            358999999  99999998754       35999998755321          2356788888888775  4455554  


Q ss_pred             ---------cCCCcEEEEEcCCCeEEEeE-E-------ecccCCceeeEEEecCCCEEEEEe--CCCCEEEEEcCCCcee
Q psy7482          73 ---------SDDGSIAIFRVGSWQLEKLF-K-------KAHKGTAVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSA  133 (327)
Q Consensus        73 ---------~~d~~i~iw~~~~~~~~~~~-~-------~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~  133 (327)
                               +.|+.+++|++...+..... .       ..+... +.+++|+|||+++++++  .|++|++||+++++..
T Consensus        92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~  170 (365)
T 4h5i_A           92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDY-TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK  170 (365)
T ss_dssp             CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCC-EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred             CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccC-EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE
Confidence                     45788999998654322111 0       112233 78999999999987654  6899999999999887


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCC---
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEES---  206 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~---  206 (327)
                      ..+...      ..|.+++|+|+++++++++++.+.+|+..+++.+....   +...+.+++|+|+ ..+++++.++   
T Consensus       171 ~~~~~~------~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~  244 (365)
T 4h5i_A          171 FEIETR------GEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG  244 (365)
T ss_dssp             EEEECS------SCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred             EEeCCC------CceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence            665432      33999999999999999998888999888887665433   6778999999999 6788887776   


Q ss_pred             -cEEEEEcCCCce----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe-ecccCceEEEeeeC
Q psy7482         207 -AITAYNLTDGSH----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI-KASASRIKGLASHR  280 (327)
Q Consensus       207 -~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~  280 (327)
                       .+++|++.....    ...+.+|..+|++++|  +|+|++||+|+.|+.|+|||+++++++..+ .+|..+|++++|+|
T Consensus       245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~--Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp  322 (365)
T 4h5i_A          245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDV--DMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP  322 (365)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEE--CTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT
T ss_pred             eEEeecccccceecceeeeeecCCCCCeEeEEE--CCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC
Confidence             688899876653    3456789999999999  499999999999999999999999999875 78999999999999


Q ss_pred             --cEEEEEecCCcEEEEEccCc
Q psy7482         281 --NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       281 --~~l~~~~~dg~v~iw~~~~~  300 (327)
                        ++||++|.|++|+||+++..
T Consensus       323 dg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          323 DSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             TSCEEEEEETTSEEEEEECCTT
T ss_pred             CCCEEEEEeCCCeEEEEEcCCC
Confidence              99999999999999999765

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1.2e-41  Score=277.33  Aligned_cols=269  Identities=20%  Similarity=0.234  Sum_probs=224.1

Q ss_pred             ccccccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCC-----CeEEEeEEecccCCceeeEEEecCCCEEEEEeC
Q psy7482          45 KQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGS-----WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK  118 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  118 (327)
                      .+..++.+|.+.|++++|+|++ ++|++|+.|++|++|++..     +..+..+ .+|... |.+++|+|++++|++++.
T Consensus         8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~-~~h~~~-v~~~~~s~dg~~l~s~s~   85 (319)
T 3frx_A            8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSF-KGHSHI-VQDCTLTADGAYALSASW   85 (319)
T ss_dssp             EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEE-ECCSSC-EEEEEECTTSSEEEEEET
T ss_pred             EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEE-eCCccc-EEEEEECCCCCEEEEEeC
Confidence            3456788999999999999965 8999999999999999864     2345566 788888 999999999999999999


Q ss_pred             CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-
Q psy7482         119 DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-  196 (327)
Q Consensus       119 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-  196 (327)
                      |++|++||+++++....+..     |...|.+++|+|++.++++++ |+.|++||++.........|...+.++.+.|. 
T Consensus        86 D~~v~~wd~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~  160 (319)
T 3frx_A           86 DKTLRLWDVATGETYQRFVG-----HKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNE  160 (319)
T ss_dssp             TSEEEEEETTTTEEEEEEEC-----CSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC-
T ss_pred             CCEEEEEECCCCCeeEEEcc-----CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCC
Confidence            99999999999987665543     244599999999999999987 99999999975443333348899999999985 


Q ss_pred             ------ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         197 ------TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       197 ------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                            ..+++++.|+.|++||+++.+....+.+|...|.+++|+  |++++|++++.|+.|++||+.+++.+..+..+ 
T Consensus       161 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s--p~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-  237 (319)
T 3frx_A          161 KADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTAS--PDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-  237 (319)
T ss_dssp             -----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEEC--TTSSEEEEEETTCEEEEEETTTTEEEEEEECC-
T ss_pred             CCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEc--CCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-
Confidence                  279999999999999999999999999999999999995  99999999999999999999999999888865 


Q ss_pred             CceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeee------cCCCCceEEEEeCCCC
Q psy7482         271 SRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSA------TNDGCRFTCLAIRPPV  326 (327)
Q Consensus       271 ~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~------~~~~~~i~~l~~~p~~  326 (327)
                      ..|.+++|+|  .+|++++ ++.+++|+++...  ....+..      ..+...+.+++|+|+.
T Consensus       238 ~~v~~~~~sp~~~~la~~~-~~~i~v~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg  298 (319)
T 3frx_A          238 DEVFSLAFSPNRYWLAAAT-ATGIKVFSLDPQY--LVDDLRPEFAGYSKAAEPHAVSLAWSADG  298 (319)
T ss_dssp             SCEEEEEECSSSSEEEEEE-TTEEEEEEETTEE--EEEEECCCCTTCCGGGCCCEEEEEECTTS
T ss_pred             CcEEEEEEcCCCCEEEEEc-CCCcEEEEeCcCe--eeeccCccccccccCcCcceeEEEECCCC
Confidence            5899999999  6666655 5569999998762  1111111      1234568999999973

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.3e-41  Score=301.31  Aligned_cols=310  Identities=16%  Similarity=0.198  Sum_probs=251.1

Q ss_pred             eeeccCCccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccc---cEEEEEECCC-CCeEEEecCCCcEEE
Q psy7482           8 FVTHSHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPE-GSHLISCSDDGSIAI   80 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~d~~i~i   80 (327)
                      ..+.+|...|.+++|  +++ ++++++.|+.|++||+.+++.+..+.+|..   .|++++|+|+ +++|++++.||.|++
T Consensus       154 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v  233 (615)
T 1pgu_A          154 GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISC  233 (615)
T ss_dssp             EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred             eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence            345589999999999  665 899999999999999999999999999999   9999999999 999999999999999


Q ss_pred             EEcCCCeEEEeEEe---cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc----------------
Q psy7482          81 FRVGSWQLEKLFKK---AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY----------------  141 (327)
Q Consensus        81 w~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----------------  141 (327)
                      ||+.+++....+..   .|... |.+++|+ ++++|++++.||.|++||+++++....+.....                
T Consensus       234 wd~~~~~~~~~~~~~~~~~~~~-v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (615)
T 1pgu_A          234 FDGKSGEFLKYIEDDQEPVQGG-IFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR  311 (615)
T ss_dssp             EETTTCCEEEECCBTTBCCCSC-EEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTE
T ss_pred             EECCCCCEeEEecccccccCCc-eEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCe
Confidence            99999998887733   67776 9999999 999999999999999999998776555443310                


Q ss_pred             ------------------------Cc---------------------------------cccceEEEEEccCCcEEEeec
Q psy7482         142 ------------------------GV---------------------------------GFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus       142 ------------------------~~---------------------------------~~~~v~~~~~~~~~~~l~~~~  164 (327)
                                              ..                                 +...|.+++| +++..+++++
T Consensus       312 l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~  390 (615)
T 1pgu_A          312 IISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSIS  390 (615)
T ss_dssp             EEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEE
T ss_pred             EEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEe
Confidence                                    01                                 1223344444 2233444443


Q ss_pred             -CCeEEEEEec----------------------------------CCceeeEecCCCceeEEEeecCceEEEeCC-CCcE
Q psy7482         165 -QNKAVVFSVE----------------------------------KAGVLQTLKSESKVHSVCFLNETTVCTGNE-ESAI  208 (327)
Q Consensus       165 -~~~i~i~d~~----------------------------------~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~-d~~i  208 (327)
                       |+.+++||+.                                  +++.+..+.+...+.+++|+ ..++++++. |+.|
T Consensus       391 ~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~d~~i  469 (615)
T 1pgu_A          391 WDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS-QNYVAVGLEEGNTI  469 (615)
T ss_dssp             TTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC-SSEEEEEETTTSCE
T ss_pred             CCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc-CCEEEEeecCCCeE
Confidence             6666666554                                  34444555566778888888 678888888 9999


Q ss_pred             EEEEcCCCcee-EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec-ccCceEEEeeeC------
Q psy7482         209 TAYNLTDGSHL-WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA-SASRIKGLASHR------  280 (327)
Q Consensus       209 ~i~d~~~~~~~-~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~------  280 (327)
                      ++||+.+++.. ..+..|...|.+++|  +|++++|++++.|+.|++||+.+++.+..+.+ |...|++++|+|      
T Consensus       470 ~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~  547 (615)
T 1pgu_A          470 QVFKLSDLEVSFDLKTPLRAKPSYISI--SPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGAN  547 (615)
T ss_dssp             EEEETTEEEEEEECSSCCSSCEEEEEE--CTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC----
T ss_pred             EEEECCCccccccccCCccCceEEEEE--CCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccccc
Confidence            99999887655 667789999999999  49999999999999999999999999999988 999999999976      


Q ss_pred             ------cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         281 ------NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       281 ------~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                            ++|++++.||.|++|++....   ........|...|++++|+|+.
T Consensus       548 ~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~h~~~v~~l~~s~~~  596 (615)
T 1pgu_A          548 EEEIEEDLVATGSLDTNIFIYSVKRPM---KIIKALNAHKDGVNNLLWETPS  596 (615)
T ss_dssp             --CCSCCEEEEEETTSCEEEEESSCTT---CCEEETTSSTTCEEEEEEEETT
T ss_pred             ccccCCCEEEEEcCCCcEEEEECCCCc---eechhhhcCccceEEEEEcCCC
Confidence                  799999999999999998862   1222234577899999999974

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.8e-41  Score=284.17  Aligned_cols=278  Identities=14%  Similarity=0.282  Sum_probs=229.7

Q ss_pred             eEEEEEccccccc----cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccC------------
Q psy7482          35 TVVLYDMVKRKQS----GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG------------   98 (327)
Q Consensus        35 ~v~~w~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~------------   98 (327)
                      ...+|+....+..    ....+|...|.+++|+|+|++|++|+ ++.+++|++.+++.+..+ ..+..            
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l-~~~~~~~~~~~~~~~~~  118 (393)
T 1erj_A           41 YYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARL-SDDSAANKDPENLNTSS  118 (393)
T ss_dssp             CEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEE-CC---------------
T ss_pred             eEEEECCCCCcccCceeEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEe-cCccccccccccccccc
Confidence            3457765433221    12235999999999999999999987 679999999999887776 33321            


Q ss_pred             -----CceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482          99 -----TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS  172 (327)
Q Consensus        99 -----~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d  172 (327)
                           ..|.+++|+|++++|++++.|+.|++||+++++....+..     |...|.+++|+|+++++++++ |+.|++||
T Consensus       119 ~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd  193 (393)
T 1erj_A          119 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-----HEQDIYSLDYFPSGDKLVSGSGDRTVRIWD  193 (393)
T ss_dssp             --CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             cCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-----CCCCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence                 1289999999999999999999999999998877655432     344599999999999999887 99999999


Q ss_pred             ecCCceeeEecCCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCceeEEe-------eecccceEEEEEEecCCCcEE
Q psy7482         173 VEKAGVLQTLKSESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGSHLWQI-------KASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       173 ~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      +++++....+.+...+.+++|+| + .++++++.|+.|++||+++++.+..+       .+|...|.+++|+  |++++|
T Consensus       194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~--~~g~~l  271 (393)
T 1erj_A          194 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT--RDGQSV  271 (393)
T ss_dssp             TTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC--TTSSEE
T ss_pred             CCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC--CCCCEE
Confidence            99999988888888999999999 5 78999999999999999998887766       5788999999995  999999


Q ss_pred             EEecCCCeEEEEEcCCC------------ceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeee
Q psy7482         244 CTGNEESAITAYNLTDG------------SHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVS  309 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~~------------~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~  309 (327)
                      ++++.|+.|++||+++.            .+...+.+|...|.+++|+|  .+|++++.||.|++||+..+.   + ...
T Consensus       272 ~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~---~-~~~  347 (393)
T 1erj_A          272 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN---P-LLM  347 (393)
T ss_dssp             EEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC---E-EEE
T ss_pred             EEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe---E-EEE
Confidence            99999999999998763            34567889999999999999  899999999999999998872   2 222


Q ss_pred             ecCCCCceEEEEeCCC
Q psy7482         310 ATNDGCRFTCLAIRPP  325 (327)
Q Consensus       310 ~~~~~~~i~~l~~~p~  325 (327)
                      ...|...|.+++|+|.
T Consensus       348 l~~h~~~v~~v~~~~~  363 (393)
T 1erj_A          348 LQGHRNSVISVAVANG  363 (393)
T ss_dssp             EECCSSCEEEEEECSS
T ss_pred             ECCCCCCEEEEEecCC
Confidence            3457788999999873

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.8e-41  Score=310.00  Aligned_cols=226  Identities=14%  Similarity=0.183  Sum_probs=185.9

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      .+..... .||.+.|++++|  ++++||+|+.||+|+||+..+.+....+. |...|.+++|+| +++|++++.|++|++
T Consensus         7 ~~~~~~~-~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~l   83 (902)
T 2oaj_A            7 SLAETNK-YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINAKDTVYV   83 (902)
T ss_dssp             EEEEEEE-EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEETTCEEEE
T ss_pred             eeccccc-cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEECcCeEEE
Confidence            3444443 589999999999  89999999999999999998777655543 788999999999 889999999999999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeec-------cccCccccceEEEEE
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL-------SSYGVGFENLDSVVW  153 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~~~~~v~~~~~  153 (327)
                      ||+.+++.+..+ . +... |.+++|+|++++|++|+.||.|++||+++++.. .+..       .....|..+|.+++|
T Consensus        84 Wd~~~~~~~~~~-~-~~~~-V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~  159 (902)
T 2oaj_A           84 LSLYSQKVLTTV-F-VPGK-ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQW  159 (902)
T ss_dssp             EETTTCSEEEEE-E-CSSC-EEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEE
T ss_pred             EECCCCcEEEEE-c-CCCC-EEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEE
Confidence            999999988887 3 5555 999999999999999999999999999987653 1111       122345677999999


Q ss_pred             ccCC-cEEEeec-CCeEEEEEecCCceeeEecC-------------------CCceeEEEeecC-ceEEEeCCCCcEEEE
Q psy7482         154 SPEG-LLYAIPI-QNKAVVFSVEKAGVLQTLKS-------------------ESKVHSVCFLNE-TTVCTGNEESAITAY  211 (327)
Q Consensus       154 ~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~~~-------------------~~~i~~~~~~~~-~~l~~~~~d~~i~i~  211 (327)
                      +|++ ..+++++ |+.| +||+++++.+..+..                   ...|.+++|+|+ .+|++++.||.|++|
T Consensus       160 sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lW  238 (902)
T 2oaj_A          160 NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFW  238 (902)
T ss_dssp             ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred             ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEE
Confidence            9964 6777776 8999 999999998887763                   367999999999 789999999999999


Q ss_pred             EcCCCceeEE--e---ee-------------cccceEEEEEEe
Q psy7482         212 NLTDGSHLWQ--I---KA-------------SASRIKGLVFFS  236 (327)
Q Consensus       212 d~~~~~~~~~--~---~~-------------~~~~v~~~~~~~  236 (327)
                      |+++++++..  +   ..             |..+|.+++|.+
T Consensus       239 d~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~  281 (902)
T 2oaj_A          239 DANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMC  281 (902)
T ss_dssp             ETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEE
T ss_pred             ECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEe
Confidence            9999887653  2   11             344788888864

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=3.4e-41  Score=285.11  Aligned_cols=272  Identities=17%  Similarity=0.246  Sum_probs=229.9

Q ss_pred             EEEEEe-CCCEEEEecCCCeEEEEEccccccccccc--cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482          17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      ++.|+| .+++||+|. |++|+|||..+++....+.  +|...|++++|+|+|++|++|+.||.|++||+++++.+..+ 
T Consensus       108 ~~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~-  185 (420)
T 4gga_A          108 LNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM-  185 (420)
T ss_dssp             CBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-
T ss_pred             ceeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE-
Confidence            456888 667888776 9999999999998776554  67888999999999999999999999999999999999998 


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS  172 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d  172 (327)
                      .+|... +.++.++  +..|++|+.|+.+++||.......... +.   .+...+..+.++|+++++++++ |+.+++|+
T Consensus       186 ~~h~~~-v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~-~~---~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~  258 (420)
T 4gga_A          186 TSHSAR-VGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVAT-LS---GHSQEVCGLRWAPDGRHLASGGNDNLVNVWP  258 (420)
T ss_dssp             CCCSSC-EEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEE-EE---CCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             eCCCCc-eEEEeeC--CCEEEEEeCCCceeEeeecccceeeEE-ec---ccccceeeeeecCCCCeeeeeeccccceEEe
Confidence            888877 8887775  679999999999999998865443221 22   2244599999999999999987 99999999


Q ss_pred             ecCCce----eeEec-CCCceeEEEeecC--ceEEE--eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482         173 VEKAGV----LQTLK-SESKVHSVCFLNE--TTVCT--GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       173 ~~~~~~----~~~~~-~~~~i~~~~~~~~--~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      ..+++.    +.... +...|.+++|+|+  ..+++  |+.|+.|++||+.+++.+..+..|. .+.++.|.  ++++.+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~--~~~~~l  335 (420)
T 4gga_A          259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWS--PHYKEL  335 (420)
T ss_dssp             SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEE--TTTTEE
T ss_pred             eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeec--CCCCeE
Confidence            987653    23333 7889999999997  45554  5689999999999999988887664 57888885  788877


Q ss_pred             EEe--cCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         244 CTG--NEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       244 ~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +++  +.|+.|++||+.+++++.++.+|.+.|++++|+|  ++|+||+.||+|+|||+...
T Consensus       336 v~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~  396 (420)
T 4gga_A          336 ISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL  396 (420)
T ss_dssp             EEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred             EEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence            764  4799999999999999999999999999999999  89999999999999999765

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=7.9e-41  Score=285.07  Aligned_cols=275  Identities=17%  Similarity=0.294  Sum_probs=245.9

Q ss_pred             eeeccCCccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482           8 FVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      ..+.+|.+.|.+++++++++++|+.||+|++||+.+++.+..+.+|...|.+++|+  ++.+++|+.||.|++||+.+++
T Consensus       153 ~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~  230 (445)
T 2ovr_B          153 RTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQ  230 (445)
T ss_dssp             EECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCC
T ss_pred             EEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCc
Confidence            34558999999999999999999999999999999999999999999999999996  5689999999999999999999


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      ....+ ..|... |.++.|  +++++++++.||.|++||+++++....+..     +...+.++.|  ++..+++++ |+
T Consensus       231 ~~~~~-~~~~~~-v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~--~~~~l~~~~~d~  299 (445)
T 2ovr_B          231 CLHVL-MGHVAA-VRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG-----HTNRVYSLQF--DGIHVVSGSLDT  299 (445)
T ss_dssp             EEEEE-ECCSSC-EEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC-----CSSCEEEEEE--CSSEEEEEETTS
T ss_pred             EEEEE-cCCccc-EEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC-----CCCceEEEEE--CCCEEEEEeCCC
Confidence            98888 788877 999998  688999999999999999998887665542     2345999999  677888887 99


Q ss_pred             eEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee---cccceEEEEEEecCCCcE
Q psy7482         167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA---SASRIKGLVFFSIPQETT  242 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~s~~~~~  242 (327)
                      .|++||+++++.+..+. +...+.++.+++ +++++++.||.|++||+++++.+..+..   |..+|.+++|    ++++
T Consensus       300 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~  374 (445)
T 2ovr_B          300 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF----NKNF  374 (445)
T ss_dssp             CEEEEETTTCCEEEEECCCCSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE----CSSE
T ss_pred             eEEEEECCCCCEEEEEcCCcccEEEEEEeC-CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE----CCCE
Confidence            99999999999998887 778888888854 6899999999999999999999988876   8889999998    4689


Q ss_pred             EEEecCCCeEEEEEcCCCceeEEe-----ecccCceEEEeeeC--cEEEEEecCCc----EEEEEccCc
Q psy7482         243 VCTGNEESAITAYNLTDGSHLWHI-----KASASRIKGLASHR--NHLICITSAGD----LVVWELNED  300 (327)
Q Consensus       243 l~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~--~~l~~~~~dg~----v~iw~~~~~  300 (327)
                      +++|+.||.|++||+.+++.+..+     ..|.+.|++++|+|  .++++|+.||+    |.+||+...
T Consensus       375 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~  443 (445)
T 2ovr_B          375 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD  443 (445)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred             EEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence            999999999999999999988888     47788999999999  88899999998    999999875

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=5.5e-41  Score=297.21  Aligned_cols=306  Identities=15%  Similarity=0.207  Sum_probs=260.6

Q ss_pred             eeEEEeee--eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc----cccccccccccc-EEEEEECC--CCCeEE
Q psy7482           2 YTLTQTFV--THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGT-ITCLKFTP--EGSHLI   70 (327)
Q Consensus         2 ~~~~~~~~--~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~   70 (327)
                      +++.+.+.  ...|.+.|.+++|  ++++|++++ ++.|++||+.++    +....+.+|... |++++|+|  ++++|+
T Consensus         4 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~   82 (615)
T 1pgu_A            4 ISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLC   82 (615)
T ss_dssp             EEEEEEECCCCCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEE
T ss_pred             cchhhccCCCCCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEE
Confidence            45566665  3468999999999  899999998 889999999998    888999999999 99999999  999999


Q ss_pred             EecCCCcEEEEEcCCC--------eEEEeEEecccCCceeeEEEecCCCEEEEEeCC----CCEEEEEcCCCceeeeeec
Q psy7482          71 SCSDDGSIAIFRVGSW--------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYITNL  138 (327)
Q Consensus        71 ~~~~d~~i~iw~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~  138 (327)
                      +++.||.|++||+.++        +....+ ..|... |.+++|+|++++|++++.+    +.|.+||  .++....+. 
T Consensus        83 s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~-  157 (615)
T 1pgu_A           83 SGDESGKVIVWGWTFDKESNSVEVNVKSEF-QVLAGP-ISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVS-  157 (615)
T ss_dssp             EEETTSEEEEEEEEEEGGGTEEEEEEEEEE-ECCSSC-EEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECC-
T ss_pred             EecCCCEEEEEeCCCCcccccccccccchh-hccccc-EEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeee-
Confidence            9999999999999754        555666 667776 9999999999999999987    6888888  444433332 


Q ss_pred             cccCccccceEEEEEccCCc-EEEeec-CCeEEEEEecCCceeeEec-CCC---ceeEEEeecC--ceEEEeCCCCcEEE
Q psy7482         139 SSYGVGFENLDSVVWSPEGL-LYAIPI-QNKAVVFSVEKAGVLQTLK-SES---KVHSVCFLNE--TTVCTGNEESAITA  210 (327)
Q Consensus       139 ~~~~~~~~~v~~~~~~~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~---~i~~~~~~~~--~~l~~~~~d~~i~i  210 (327)
                          .+...+.+++|+|++. ++++++ |+.|++||..+++.+..+. |..   .|.+++|+|+  .++++++.|+.|++
T Consensus       158 ----~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v  233 (615)
T 1pgu_A          158 ----GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISC  233 (615)
T ss_dssp             ----SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred             ----cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence                2345699999999997 677776 9999999999999998888 777   8999999998  57889999999999


Q ss_pred             EEcCCCceeEEe-e---ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc----cCceEEEeeeC-c
Q psy7482         211 YNLTDGSHLWQI-K---ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS----ASRIKGLASHR-N  281 (327)
Q Consensus       211 ~d~~~~~~~~~~-~---~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~-~  281 (327)
                      ||+++++.+..+ .   .|...|.+++|  + ++++|++++.|+.|++||+.+++.+..+..+    ...+.++.|.. .
T Consensus       234 wd~~~~~~~~~~~~~~~~~~~~v~~~~~--~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (615)
T 1pgu_A          234 FDGKSGEFLKYIEDDQEPVQGGIFALSW--L-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG  310 (615)
T ss_dssp             EETTTCCEEEECCBTTBCCCSCEEEEEE--S-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETT
T ss_pred             EECCCCCEeEEecccccccCCceEEEEE--c-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCC
Confidence            999999999988 6   89999999999  5 9999999999999999999999999988877    36788888866 9


Q ss_pred             EEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         282 HLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       282 ~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++++++.||.|++||+....   +. .....|...|++++| |+
T Consensus       311 ~l~~~~~~g~i~~~d~~~~~---~~-~~~~~~~~~v~~~~~-~~  349 (615)
T 1pgu_A          311 RIISLSLDGTLNFYELGHDE---VL-KTISGHNKGITALTV-NP  349 (615)
T ss_dssp             EEEEEETTSCEEEEETTEEE---EE-EEECCCSSCEEEEET-TT
T ss_pred             eEEEEECCCCEEEEECCCCc---EE-EEEeCCCCCEEEEEe-cC
Confidence            99999999999999998762   21 122346678888888 75

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.8e-41  Score=273.65  Aligned_cols=243  Identities=14%  Similarity=0.248  Sum_probs=202.9

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccc--cccccccccccccEEEEEECCC--CCeEEEecCCCcEEEEE
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVK--RKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIFR   82 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~   82 (327)
                      .+.+|.+.|.+++|  ++++||+|+.|++|+|||+..  .+.+..+.+|.++|.+++|+|+  +++|++|+.|++|++||
T Consensus         4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd   83 (297)
T 2pm7_B            4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK   83 (297)
T ss_dssp             ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred             eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence            45699999999999  899999999999999999974  4677889999999999999874  88999999999999999


Q ss_pred             cCCCe--EEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC--
Q psy7482          83 VGSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--  156 (327)
Q Consensus        83 ~~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--  156 (327)
                      +++++  ....+ ..|... |.+++|+|+  +.+|++++.||.|++||++++.........   .|...+.+++|+|+  
T Consensus        84 ~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~  158 (297)
T 2pm7_B           84 EENGRWSQIAVH-AVHSAS-VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID---AHAIGVNSASWAPATI  158 (297)
T ss_dssp             BSSSCBCCCEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE---CCSSCEEEEEECCCC-
T ss_pred             cCCCceEEEEEe-ecCCCc-eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee---cccCccceEeecCCcc
Confidence            98874  34445 567777 999999997  889999999999999999876432212222   23455999999997  


Q ss_pred             -----------CcEEEeec-CCeEEEEEecCCc----eeeEec-CCCceeEEEeecC----ceEEEeCCCCcEEEEEcCC
Q psy7482         157 -----------GLLYAIPI-QNKAVVFSVEKAG----VLQTLK-SESKVHSVCFLNE----TTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       157 -----------~~~l~~~~-~~~i~i~d~~~~~----~~~~~~-~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~  215 (327)
                                 +++|++++ |+.|++||+++++    ....+. |...|.+++|+|+    .+|++++.|++|++||++.
T Consensus       159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~  238 (297)
T 2pm7_B          159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN  238 (297)
T ss_dssp             -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred             cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence                       46888887 9999999998766    455665 8899999999997    5799999999999999987


Q ss_pred             Cc---eeEEe--eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         216 GS---HLWQI--KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       216 ~~---~~~~~--~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                      ..   ....+  ..|...+.+++|+  |++++|++++.|+.|++|+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~v~~~~~s--~~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          239 EQGPWKKTLLKEEKFPDVLWRASWS--LSGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             TTSCCEEEESSSSCCSSCEEEEEEC--SSSCCEEEEETTSCEEEEEEC
T ss_pred             CCCccceeeeecccCCCcEEEEEEC--CCCCEEEEEcCCCcEEEEEEC
Confidence            43   12223  4678899999995  999999999999999999976

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=4.8e-41  Score=319.38  Aligned_cols=311  Identities=18%  Similarity=0.269  Sum_probs=257.9

Q ss_pred             eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECC--CCCeEEEecCCCcEEEEE
Q psy7482           7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~   82 (327)
                      ...+.+|.+.|.+++|  ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|  ++.++++|+.|+.|++||
T Consensus       650 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd  729 (1249)
T 3sfz_A          650 LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD  729 (1249)
T ss_dssp             EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred             EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEE
Confidence            3445689999999999  899999999999999999999999999999999999999999  556899999999999999


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccc----------------------
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSS----------------------  140 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------------------  140 (327)
                      +.+++....+ .+|... |.+++|+|+++++++++.||.|++||+.+++.........                      
T Consensus       730 ~~~~~~~~~~-~~h~~~-v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  807 (1249)
T 3sfz_A          730 LNQKECRNTM-FGHTNS-VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS  807 (1249)
T ss_dssp             TTSSSEEEEE-CCCSSC-EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred             CCCcchhhee-cCCCCC-EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence            9999999888 788887 9999999999999999999999999998876544332111                      


Q ss_pred             ----------------------------cCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeE
Q psy7482         141 ----------------------------YGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHS  190 (327)
Q Consensus       141 ----------------------------~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~  190 (327)
                                                  ...+...+.+++|+|++.++++++ ++.|++||+.++..+..+. |...|.+
T Consensus       808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~  887 (1249)
T 3sfz_A          808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHG  887 (1249)
T ss_dssp             TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred             CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEE
Confidence                                        012345577888888888888776 8888888888877777766 6677777


Q ss_pred             EEeecC-ceEEEeCCCCcEEEEEc--------------------------------------------------------
Q psy7482         191 VCFLNE-TTVCTGNEESAITAYNL--------------------------------------------------------  213 (327)
Q Consensus       191 ~~~~~~-~~l~~~~~d~~i~i~d~--------------------------------------------------------  213 (327)
                      ++|+|+ ..+++++.|+.|++||+                                                        
T Consensus       888 v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  967 (1249)
T 3sfz_A          888 VMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCC  967 (1249)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEE
T ss_pred             EEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEE
Confidence            777777 56777777777777764                                                        


Q ss_pred             -----------------------CCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         214 -----------------------TDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       214 -----------------------~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                                             .+++....+.+|...|.+++|+  |++++|++++.||.|++||+.+++.. .+..|.
T Consensus       968 ~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s--~dg~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~ 1044 (1249)
T 3sfz_A          968 CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFT--ADGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQ 1044 (1249)
T ss_dssp             EECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEEC--SSSSCEEEECSSSBEEEEETTTTEEE-CCBCCS
T ss_pred             EEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEEC--CCCCEEEEEcCCCEEEEEECCCCceE-EEecCC
Confidence                                   3344455667788999999994  99999999999999999999998766 456789


Q ss_pred             CceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         271 SRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       271 ~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ..|.+++|++ ..+++++.||.|++||+.++.  ....+  ..+...|++++|+|+.
T Consensus      1045 ~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~--~~~~~--~~~~~~v~~~~~s~d~ 1097 (1249)
T 3sfz_A         1045 ETVKDFRLLQDSRLLSWSFDGTVKVWNVITGR--IERDF--TCHQGTVLSCAISSDA 1097 (1249)
T ss_dssp             SCEEEEEECSSSEEEEEESSSEEEEEETTTTC--CCEEE--ECCSSCCCCEEECSSS
T ss_pred             CcEEEEEEcCCCcEEEEECCCcEEEEECCCCc--eeEEE--cccCCcEEEEEECCCC
Confidence            9999999999 889999999999999998883  22222  3467789999999973

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=9.9e-41  Score=274.47  Aligned_cols=275  Identities=18%  Similarity=0.282  Sum_probs=228.3

Q ss_pred             cccccccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCCCe-----EEEeEEecccCCceeeEEEecCCCEEEE
Q psy7482          42 VKRKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQ-----LEKLFKKAHKGTAVNHISIHPSGKLALS  115 (327)
Q Consensus        42 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~  115 (327)
                      ++.++..++++|.+.|++++|+|+ +++|++|+.|++|++||+.+.+     +...+ .+|... |.+++|+|++++|++
T Consensus        26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l-~~h~~~-V~~~~~s~dg~~l~s  103 (340)
T 4aow_A           26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL-RGHSHF-VSDVVISSDGQFALS  103 (340)
T ss_dssp             CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE-CCCSSC-EEEEEECTTSSEEEE
T ss_pred             CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE-eCCCCC-EEEEEECCCCCEEEE
Confidence            344566789999999999999997 6899999999999999997643     34555 778877 999999999999999


Q ss_pred             EeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEE
Q psy7482         116 VGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVC  192 (327)
Q Consensus       116 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~  192 (327)
                      ++.|+.|++|+...............     .+....+++++.++++++ |+.+++||...........  +...+..++
T Consensus       104 ~~~d~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~  178 (340)
T 4aow_A          104 GSWDGTLRLWDLTTGTTTRRFVGHTK-----DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVR  178 (340)
T ss_dssp             EETTSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEE
T ss_pred             EcccccceEEeecccceeeeecCCCC-----ceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceE
Confidence            99999999999988776555443332     388889999999998887 9999999988765544332  778899999


Q ss_pred             eecC---ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482         193 FLNE---TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       193 ~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                      |+++   .++++++.|+.|++||+++++.+..+.+|..+|++++|+  |++++|++|+.|+.|++||+.+.+++..+..+
T Consensus       179 ~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s--~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~  256 (340)
T 4aow_A          179 FSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVS--PDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG  256 (340)
T ss_dssp             ECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--TTSSEEEEEETTCEEEEEETTTTEEEEEEECS
T ss_pred             EccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEEC--CCCCEEEEEeCCCeEEEEEeccCceeeeecCC
Confidence            9876   467899999999999999999999999999999999994  99999999999999999999999999888865


Q ss_pred             cCceEEEeeeC-cEEEEEecCCcEEEEEccCccCC-----CceeeeecCCCCceEEEEeCCCC
Q psy7482         270 ASRIKGLASHR-NHLICITSAGDLVVWELNEDVTR-----EPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       270 ~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~-----~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                       ..|.+++|+| ..+++++.|+.|++||++.....     .........+...|++++|+|+.
T Consensus       257 -~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg  318 (340)
T 4aow_A          257 -DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADG  318 (340)
T ss_dssp             -SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTS
T ss_pred             -ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCC
Confidence             4899999999 78888899999999999876200     11111223467889999999973

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=5e-41  Score=270.97  Aligned_cols=246  Identities=16%  Similarity=0.263  Sum_probs=205.3

Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC--CeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEE
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS--WQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLR  123 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~  123 (327)
                      ..+.+|.+.|++++|+|+|++|++|+.|++|++||+..  .+....+ .+|.+. |.+++|++  ++++|++++.||+|+
T Consensus         3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l-~gH~~~-V~~v~~s~~~~g~~l~s~s~D~~v~   80 (297)
T 2pm7_B            3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL-TGHEGP-VWRVDWAHPKFGTILASCSYDGKVM   80 (297)
T ss_dssp             EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTTEEE
T ss_pred             eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE-ccccCC-eEEEEecCCCcCCEEEEEcCCCEEE
Confidence            35678999999999999999999999999999999974  3566777 888888 99999986  488999999999999


Q ss_pred             EEEcCCCceeeeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCce--eeEec-CCCceeEEEeecC-
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGV--LQTLK-SESKVHSVCFLNE-  196 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~--~~~~~-~~~~i~~~~~~~~-  196 (327)
                      +||+++++........   .|...|.+++|+|+  +.+|++++ |+.|++||++++..  ...+. |...+.+++|+|+ 
T Consensus        81 iWd~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~  157 (297)
T 2pm7_B           81 IWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT  157 (297)
T ss_dssp             EEEBSSSCBCCCEEEC---CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred             EEEcCCCceEEEEEee---cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence            9999887533222222   23456999999997  78888887 99999999987642  23333 8889999999986 


Q ss_pred             -------------ceEEEeCCCCcEEEEEcCCCc----eeEEeeecccceEEEEEEecCC---CcEEEEecCCCeEEEEE
Q psy7482         197 -------------TTVCTGNEESAITAYNLTDGS----HLWQIKASASRIKGLVFFSIPQ---ETTVCTGNEESAITAYN  256 (327)
Q Consensus       197 -------------~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~s~~---~~~l~~~~~d~~i~i~d  256 (327)
                                   .+|++|+.|+.|++||+++++    ....+.+|...|.+++|+  |+   +.+|++++.|+.|++||
T Consensus       158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s--p~~~~~~~las~s~D~~v~iWd  235 (297)
T 2pm7_B          158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS--PTVLLRSYMASVSQDRTCIIWT  235 (297)
T ss_dssp             ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC--CCCSSSEEEEEEETTSCEEEEE
T ss_pred             ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC--CCCCCceEEEEEECCCcEEEEE
Confidence                         489999999999999998766    566788999999999995  77   48999999999999999


Q ss_pred             cCCCc---eeEEe--ecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         257 LTDGS---HLWHI--KASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       257 ~~~~~---~~~~~--~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +++..   ....+  ..|...|.+++|+|  ++|++++.||.|++|+....
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~  286 (297)
T 2pm7_B          236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  286 (297)
T ss_dssp             ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred             eCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence            98753   22233  46788999999999  89999999999999998754

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=2.6e-41  Score=278.22  Aligned_cols=273  Identities=11%  Similarity=0.116  Sum_probs=233.6

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc---cccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEc-
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK---QSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRV-   83 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~-   83 (327)
                      .+|.+.|.+++|  ++++|++++.||.|++||+.+++   ....+.+|...|++++|+|+++ +|++|+.||.|++||+ 
T Consensus         8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~   87 (342)
T 1yfq_A            8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI   87 (342)
T ss_dssp             SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred             cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence            489999999999  89999999999999999998876   3455568999999999999999 9999999999999999 


Q ss_pred             CCCeEEEeEEec--ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC---------CceeeeeeccccCccccceEEEE
Q psy7482          84 GSWQLEKLFKKA--HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK---------GRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        84 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                      .+++. ..+ ..  |... |.+++|+| ++++++++.|+.|++||+++         ++....+.      +...+.+++
T Consensus        88 ~~~~~-~~~-~~~~~~~~-v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~  157 (342)
T 1yfq_A           88 GSPSF-QAL-TNNEANLG-ICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK------VKNKIFTMD  157 (342)
T ss_dssp             SSSSE-EEC-BSCCCCSC-EEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS------SCCCEEEEE
T ss_pred             cCCce-Eec-cccCCCCc-eEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe------eCCceEEEE
Confidence            87765 444 56  7777 99999999 99999999999999999987         55444333      234599999


Q ss_pred             EccCCcEEEeecCCeEEEEEecC-Ccee---eEecCCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCC------ceeE
Q psy7482         153 WSPEGLLYAIPIQNKAVVFSVEK-AGVL---QTLKSESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDG------SHLW  220 (327)
Q Consensus       153 ~~~~~~~l~~~~~~~i~i~d~~~-~~~~---~~~~~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~------~~~~  220 (327)
                      |+|++ +++++.++.|++||+++ +...   ....+...+.+++|+| + .++++++.||.+++|+++..      +...
T Consensus       158 ~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~  236 (342)
T 1yfq_A          158 TNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF  236 (342)
T ss_dssp             ECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred             ecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence            99988 44444499999999998 5432   2223788999999999 7 89999999999999999887      7778


Q ss_pred             Eeeeccc---------ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc-cCceEEEeeeC-cEEEEEecC
Q psy7482         221 QIKASAS---------RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS-ASRIKGLASHR-NHLICITSA  289 (327)
Q Consensus       221 ~~~~~~~---------~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~-~~l~~~~~d  289 (327)
                      .+..|..         .|.+++|+  |++++|++++.||.|++||+.+++.+..+.+| ..+|.+++ .. ++|++++.|
T Consensus       237 ~~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~D  313 (342)
T 1yfq_A          237 AFRCHRLNLKDTNLAYPVNSIEFS--PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA-CSDNILCLATSD  313 (342)
T ss_dssp             EEECCCCCTTCCSSCCCEEEEEEC--TTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE-ECSSEEEEEEEC
T ss_pred             eeecccccccccccceeEEEEEEc--CCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec-CCCCeEEEEecC
Confidence            8888865         99999995  89999999999999999999999999999998 99999999 33 999999999


Q ss_pred             Cc-EEEEEc
Q psy7482         290 GD-LVVWEL  297 (327)
Q Consensus       290 g~-v~iw~~  297 (327)
                      |. .+.|..
T Consensus       314 g~~~~~~~~  322 (342)
T 1yfq_A          314 DTFKTNAAI  322 (342)
T ss_dssp             THHHHCSSS
T ss_pred             Ccccccccc
Confidence            99 666664

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=4.5e-41  Score=286.74  Aligned_cols=290  Identities=15%  Similarity=0.252  Sum_probs=229.4

Q ss_pred             eeEEEeeee----ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc-----------ccccccccc----------
Q psy7482           2 YTLTQTFVT----HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-----------QSGALMQHE----------   54 (327)
Q Consensus         2 ~~~~~~~~~----~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~-----------~~~~~~~~~----------   54 (327)
                      |++.+.+..    -.|.+.|++++|  ++++||+|+.||.|+|||+.+++           ....+.+|.          
T Consensus        12 w~~~q~~~~~~~~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~   91 (447)
T 3dw8_B           12 WCFSQVKGAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLE   91 (447)
T ss_dssp             CEEEECCSCSSSCCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEE
T ss_pred             EEEEEecccccccccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccccccccccc
Confidence            455555442    236899999999  89999999999999999998876           467788898          


Q ss_pred             --ccEEEEEECCCC--CeEEEecCCCcEEEEEcCCCeEE---------------------------------------Ee
Q psy7482          55 --GTITCLKFTPEG--SHLISCSDDGSIAIFRVGSWQLE---------------------------------------KL   91 (327)
Q Consensus        55 --~~v~~~~~~~~~--~~l~~~~~d~~i~iw~~~~~~~~---------------------------------------~~   91 (327)
                        ..|++++|+|++  ..|++++.|+.|++||+.+++..                                       ..
T Consensus        92 ~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (447)
T 3dw8_B           92 IEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRI  171 (447)
T ss_dssp             ECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEE
T ss_pred             ccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEE
Confidence              889999999998  79999999999999999764432                                       12


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC-Cceeeeeecc--ccCccccceEEEEEccCC-cEEEeec-CC
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK-GRSAYITNLS--SYGVGFENLDSVVWSPEG-LLYAIPI-QN  166 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~--~~~~~~~~v~~~~~~~~~-~~l~~~~-~~  166 (327)
                      +..+|... |.+++|+|++++|+++ .||.|++||+++ ++........  ....+...|.+++|+|++ +++++++ |+
T Consensus       172 ~~~~h~~~-v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg  249 (447)
T 3dw8_B          172 FANAHTYH-INSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG  249 (447)
T ss_dssp             ECSCCSSC-CCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred             eccCCCcc-eEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence            22457776 9999999999999998 799999999984 3333322111  123445679999999998 8888887 99


Q ss_pred             eEEEEEecCCce----eeEec-CCC------------ceeEEEeecC-ceEEEeCCCCcEEEEEcCC-CceeEEeeeccc
Q psy7482         167 KAVVFSVEKAGV----LQTLK-SES------------KVHSVCFLNE-TTVCTGNEESAITAYNLTD-GSHLWQIKASAS  227 (327)
Q Consensus       167 ~i~i~d~~~~~~----~~~~~-~~~------------~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~  227 (327)
                      .|++||+++++.    ...+. +..            .|.+++|+|+ .+|++++. +.|++||+++ ++++..+..|..
T Consensus       250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~  328 (447)
T 3dw8_B          250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEY  328 (447)
T ss_dssp             CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGG
T ss_pred             eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccc
Confidence            999999999886    66676 443            8999999999 77888888 9999999997 888888888864


Q ss_pred             c---------------eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec------------------------
Q psy7482         228 R---------------IKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA------------------------  268 (327)
Q Consensus       228 ~---------------v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~------------------------  268 (327)
                      .               +..++|  +|++++|++|+.||.|++||+.+++.+. +.+                        
T Consensus       329 ~~~~l~~~~~~~~i~~~~~~~~--s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (447)
T 3dw8_B          329 LRSKLCSLYENDCIFDKFECCW--NGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKK  405 (447)
T ss_dssp             GTTTHHHHHHTSGGGCCCCEEE--CTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCT
T ss_pred             ccccccccccccccccceEEEE--CCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCccc
Confidence            2               224888  4999999999999999999999887653 222                        


Q ss_pred             ---------ccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         269 ---------SASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       269 ---------~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                               +...|..++|+|  ++||+++.++ +++|.-.
T Consensus       406 ~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~  445 (447)
T 3dw8_B          406 DEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK  445 (447)
T ss_dssp             TCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred             ccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence                     234688999999  8888887665 8888643

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-41  Score=307.78  Aligned_cols=304  Identities=11%  Similarity=0.167  Sum_probs=229.6

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccccc-----------cccccccccEEEEEECCC-CCeEEEecCCCcE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS-----------GALMQHEGTITCLKFTPE-GSHLISCSDDGSI   78 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i   78 (327)
                      |.+.|++++|  ++++|++|+.||+|++||+.+++..           ..+.+|.++|++++|+|+ +..|++|+.||.|
T Consensus        97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v  176 (902)
T 2oaj_A           97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL  176 (902)
T ss_dssp             CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE
T ss_pred             CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE
Confidence            6788999999  8999999999999999999887653           345679999999999996 5789999999999


Q ss_pred             EEEEcCCCeEEEeEEecc------------------cCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccc
Q psy7482          79 AIFRVGSWQLEKLFKKAH------------------KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSS  140 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  140 (327)
                       +||+++++....+ ..|                  ... |.+++|+|++++|++++.||.|++||+++++.+....+..
T Consensus       177 -lWd~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~h~~~-V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~  253 (902)
T 2oaj_A          177 -TYSLVENEIKQSF-IYELPPFAPGGDFSEKTNEKRTPK-VIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFE  253 (902)
T ss_dssp             -EEETTTTEEEEEE-CCCBCTTCCCSTTCCCTTSCBCCC-EEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSC
T ss_pred             -EEECCCCceEEEE-ecccCCcCCCcccccccccccCCC-eEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecc
Confidence             9999999988877 444                  344 9999999999999999999999999999887754322210


Q ss_pred             ---cC----------ccccceEEEEEc----cCC-cEEEeec-C-----CeEEEEE------------------------
Q psy7482         141 ---YG----------VGFENLDSVVWS----PEG-LLYAIPI-Q-----NKAVVFS------------------------  172 (327)
Q Consensus       141 ---~~----------~~~~~v~~~~~~----~~~-~~l~~~~-~-----~~i~i~d------------------------  172 (327)
                         +.          .+..+|.+++|+    |++ .++++|+ +     ..+.+|+                        
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~  333 (902)
T 2oaj_A          254 TEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQ  333 (902)
T ss_dssp             SCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSE
T ss_pred             cccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccc
Confidence               00          123358888884    332 3455443 2     1454554                        


Q ss_pred             -----------------------------------------------ecCCceeeE-------ec-CCCceeEE------
Q psy7482         173 -----------------------------------------------VEKAGVLQT-------LK-SESKVHSV------  191 (327)
Q Consensus       173 -----------------------------------------------~~~~~~~~~-------~~-~~~~i~~~------  191 (327)
                                                                     +.++.....       +. +...|+++      
T Consensus       334 ~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~  413 (902)
T 2oaj_A          334 MKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVP  413 (902)
T ss_dssp             EEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEE
T ss_pred             eEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcC
Confidence                                                           322221110       00 11334433      


Q ss_pred             ----------------------------EeecC-ceEEEeCCCCcEEEEEcCCCcee--EEe----e-----ecccceEE
Q psy7482         192 ----------------------------CFLNE-TTVCTGNEESAITAYNLTDGSHL--WQI----K-----ASASRIKG  231 (327)
Q Consensus       192 ----------------------------~~~~~-~~l~~~~~d~~i~i~d~~~~~~~--~~~----~-----~~~~~v~~  231 (327)
                                                  +|+|+ +++++|+.|++|++||+.++...  ..+    .     +|...|.+
T Consensus       414 ~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~s  493 (902)
T 2oaj_A          414 NKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDK  493 (902)
T ss_dssp             HHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEE
T ss_pred             HHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeE
Confidence                                        44677 78999999999999999877431  111    1     78889999


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCc---------------------------------------------eeEEe
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGS---------------------------------------------HLWHI  266 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~---------------------------------------------~~~~~  266 (327)
                      ++|+  |++++||+|+.||+|++||+.+++                                             ++..+
T Consensus       494 vafs--pdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l  571 (902)
T 2oaj_A          494 ISFA--AETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAV  571 (902)
T ss_dssp             EEEE--TTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEE
T ss_pred             EEec--CCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEE
Confidence            9995  999999999999999999998662                                             46778


Q ss_pred             ecccCceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCce--eeeec--CCCCceEEEEeC
Q psy7482         267 KASASRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQ--RVSAT--NDGCRFTCLAIR  323 (327)
Q Consensus       267 ~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~--~~~~~--~~~~~i~~l~~~  323 (327)
                      .+|.+.|++++|+| .+||+|+.||+|++||+....  ...  .+...  .|...|++++|+
T Consensus       572 ~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~--~~~~~~~~~~~~gh~~~V~sv~Fs  631 (902)
T 2oaj_A          572 HANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPA--IIYMENIREISGAQSACVTCIEFV  631 (902)
T ss_dssp             CCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTTE--EEEEEEGGGTCSSCCCCEEEEEEE
T ss_pred             EcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCCe--EEEEeehhHhccccccceEEEEEE
Confidence            89999999999999 999999999999999987762  111  11112  577889999999

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=7.7e-41  Score=277.85  Aligned_cols=280  Identities=15%  Similarity=0.179  Sum_probs=235.0

Q ss_pred             eeccCCccEEEEEe--C---CCEEEEecCCCeEEEEEccc-cccc-cccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482           9 VTHSHTASVRSVAA--T---SKLAASSGADETVVLYDMVK-RKQS-GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF   81 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~---~~~l~~~~~dg~v~~w~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw   81 (327)
                      .+.+|.+.|++++|  +   +++|++|+.||.|++||+.+ +... ..+.+|...|++++|+|++++|++++.||.|++|
T Consensus        34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iw  113 (368)
T 3mmy_A           34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW  113 (368)
T ss_dssp             CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred             eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEE
Confidence            44689999999999  4   58999999999999999987 4444 6788899999999999999999999999999999


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEE--ecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISI--HPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL  159 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  159 (327)
                      |+.+++....  ..|... |.+++|  ++++++|++++.||.|++||+++++....+.....      +.++.+.++ ..
T Consensus       114 d~~~~~~~~~--~~~~~~-v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~------~~~~~~~~~-~~  183 (368)
T 3mmy_A          114 DLSSNQAIQI--AQHDAP-VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPER------CYCADVIYP-MA  183 (368)
T ss_dssp             ETTTTEEEEE--EECSSC-EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSC------EEEEEEETT-EE
T ss_pred             EcCCCCceee--ccccCc-eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCC------ceEEEecCC-ee
Confidence            9999887764  467777 999999  88999999999999999999999988777765543      677777654 34


Q ss_pred             EEeecCCeEEEEEecCCceeeEec---CCCceeEEEeecC-c----eEEEeCCCCcEEEEEcCCC---ceeEEeeeccc-
Q psy7482         160 YAIPIQNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-T----TVCTGNEESAITAYNLTDG---SHLWQIKASAS-  227 (327)
Q Consensus       160 l~~~~~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~----~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~-  227 (327)
                      ++++.++.+.+|+++.........   ......++++.++ .    .+++++.||.|++||++..   +.+..+..|.. 
T Consensus       184 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~  263 (368)
T 3mmy_A          184 VVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN  263 (368)
T ss_dssp             EEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred             EEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecc
Confidence            444459999999998765443332   3455666666654 2    3999999999999999887   55677777776 


Q ss_pred             -----------ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEE
Q psy7482         228 -----------RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVV  294 (327)
Q Consensus       228 -----------~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~i  294 (327)
                                 +|.+++|+  |++++|++++.||.|++||+.+++++..+.+|..+|++++|+|  .+|++++.|+..+.
T Consensus       264 ~~~~~~~~~~~~v~~~~~s--p~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~  341 (368)
T 3mmy_A          264 GTNTSAPQDIYAVNGIAFH--PVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKG  341 (368)
T ss_dssp             ----CCCEEECCEEEEEEC--TTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred             cccccccccccceEEEEEe--cCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence                       79999995  8999999999999999999999999999999999999999999  89999999987776


Q ss_pred             EEccCc
Q psy7482         295 WELNED  300 (327)
Q Consensus       295 w~~~~~  300 (327)
                      |++...
T Consensus       342 ~~~~~~  347 (368)
T 3mmy_A          342 HEFYNP  347 (368)
T ss_dssp             GGGCCT
T ss_pred             ccccCC
Confidence            665544

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=9e-40  Score=266.26  Aligned_cols=272  Identities=16%  Similarity=0.215  Sum_probs=225.4

Q ss_pred             EEEEEe-CCCEEEEecCCCeEEEEEccccccccccc--cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482          17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      .++|+| .+++||+|. |++|+|||+.+++.+..+.  +|...|++++|+|++++|++|+.||+|++||+++++.+..+ 
T Consensus        28 ~~~l~WS~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~-  105 (318)
T 4ggc_A           28 LNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM-  105 (318)
T ss_dssp             CBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-
T ss_pred             ceEEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe-
Confidence            467899 556777765 9999999999998877664  67888999999999999999999999999999999999988 


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS  172 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d  172 (327)
                      .+|... +.++.  +++..+++++.++.+++|+.......... ..   .+...+..+.+.++++++++++ |+.|++||
T Consensus       106 ~~h~~~-~~~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd  178 (318)
T 4ggc_A          106 TSHSAR-VGSLS--WNSYILSSGSRSGHIHHHDVRVAEHHVAT-LS---GHSQEVCGLRWAPDGRHLASGGNDNLVNVWP  178 (318)
T ss_dssp             ECCSSC-EEEEE--EETTEEEEEETTSEEEEEETTSSSCEEEE-EE---CCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             cCccce-EEEee--cCCCEEEEEecCCceEeeecCCCceeEEE-Ec---CccCceEEEEEcCCCCEEEEEecCcceeEEE
Confidence            788766 66554  55779999999999999998876543222 11   2234599999999999999987 99999999


Q ss_pred             ecCCceee----Ee-cCCCceeEEEeecC--ce--EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482         173 VEKAGVLQ----TL-KSESKVHSVCFLNE--TT--VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       173 ~~~~~~~~----~~-~~~~~i~~~~~~~~--~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      +++++...    .. .+...+.++.++|+  ..  +++++.++.|++||.+........ .+...+..+.|.  +++..+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~--~~~~~~  255 (318)
T 4ggc_A          179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWS--PHYKEL  255 (318)
T ss_dssp             SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEE--TTTTEE
T ss_pred             CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeec--ccccce
Confidence            98876332    22 26788999999987  33  356788999999999888766554 466778899996  777766


Q ss_pred             EE--ecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         244 CT--GNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       244 ~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++  |+.|+.|++||+++++++.++.+|.+.|++++|+|  ++|++|+.||+|+|||+.+.
T Consensus       256 ~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~  316 (318)
T 4ggc_A          256 ISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL  316 (318)
T ss_dssp             EEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence            55  45899999999999999999999999999999999  89999999999999999765

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=6.3e-40  Score=276.19  Aligned_cols=283  Identities=17%  Similarity=0.264  Sum_probs=233.7

Q ss_pred             eeccCCccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccc-------------cccccEEEEEECC-CCCeEEE
Q psy7482           9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALM-------------QHEGTITCLKFTP-EGSHLIS   71 (327)
Q Consensus         9 ~~~~h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~l~~   71 (327)
                      .+.+|.+.|++++|   ++++|++|+.||.|++||+.+++....+.             +|...|.+++|+| ++.+|++
T Consensus        38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s  117 (408)
T 4a11_B           38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS  117 (408)
T ss_dssp             ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred             eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence            34589999999999   67999999999999999999887665553             5999999999999 7789999


Q ss_pred             ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC---CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccce
Q psy7482          72 CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS---GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENL  148 (327)
Q Consensus        72 ~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v  148 (327)
                      ++.||.|++||+.+++....+ . +... +.++.+++.   +.++++++.||.|++||+++++....+..     +...+
T Consensus       118 ~~~d~~i~iwd~~~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~v  189 (408)
T 4a11_B          118 SSFDKTLKVWDTNTLQTADVF-N-FEET-VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQG-----HRQEI  189 (408)
T ss_dssp             EETTSEEEEEETTTTEEEEEE-E-CSSC-EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECC-----CCSCE
T ss_pred             EeCCCeEEEeeCCCCccceec-c-CCCc-eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecC-----CCCcE
Confidence            999999999999999988877 3 4445 999999984   45999999999999999998877655542     23459


Q ss_pred             EEEEEccCCc-EEEeec-CCeEEEEEecCCc-eeeEe----------------cCCCceeEEEeecC-ceEEEeCCCCcE
Q psy7482         149 DSVVWSPEGL-LYAIPI-QNKAVVFSVEKAG-VLQTL----------------KSESKVHSVCFLNE-TTVCTGNEESAI  208 (327)
Q Consensus       149 ~~~~~~~~~~-~l~~~~-~~~i~i~d~~~~~-~~~~~----------------~~~~~i~~~~~~~~-~~l~~~~~d~~i  208 (327)
                      .+++|+|++. ++++++ ||.|++||++++. ....+                .+...|.+++|+|+ .++++++.||.|
T Consensus       190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  269 (408)
T 4a11_B          190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM  269 (408)
T ss_dssp             EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence            9999999998 577776 9999999998765 33332                26788999999999 789999999999


Q ss_pred             EEEEcCCCceeEEeeeccc----ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cE
Q psy7482         209 TAYNLTDGSHLWQIKASAS----RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NH  282 (327)
Q Consensus       209 ~i~d~~~~~~~~~~~~~~~----~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~  282 (327)
                      ++||+++++....+..+..    ........ ...+..+++++.|+.|++||+.+++++..+.+|...|++++|+|  ++
T Consensus       270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~  348 (408)
T 4a11_B          270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVS-CGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE  348 (408)
T ss_dssp             EEEETTTCCBCCCCCCCCCCCCSSCCCCEEC-CSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTE
T ss_pred             EEEECCCCccceeccccccccccccceeEEe-cCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCE
Confidence            9999998876554432211    11112221 14566777778899999999999999999999999999999999  89


Q ss_pred             EEEEecCCcEEEEEccCc
Q psy7482         283 LICITSAGDLVVWELNED  300 (327)
Q Consensus       283 l~~~~~dg~v~iw~~~~~  300 (327)
                      |++++.||.|++|++...
T Consensus       349 l~s~~~dg~i~iw~~~~~  366 (408)
T 4a11_B          349 LYSGSRDCNILAWVPSLY  366 (408)
T ss_dssp             EEEEETTSCEEEEEECC-
T ss_pred             EEEECCCCeEEEEeCCCC
Confidence            999999999999999987

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-41  Score=292.64  Aligned_cols=263  Identities=12%  Similarity=0.099  Sum_probs=208.1

Q ss_pred             EEecCCCeEEEEEccccccc----cccccccccEEEEEECCC------CCeEEEecCCCcEEEEEcCCCeE---------
Q psy7482          28 ASSGADETVVLYDMVKRKQS----GALMQHEGTITCLKFTPE------GSHLISCSDDGSIAIFRVGSWQL---------   88 (327)
Q Consensus        28 ~~~~~dg~v~~w~~~~~~~~----~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~i~iw~~~~~~~---------   88 (327)
                      ++++.|++|+|||+.+++..    ..+..|.+.|.+++|+|+      +.+||+++.||+|++||+..++.         
T Consensus       177 aS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~  256 (524)
T 2j04_B          177 DKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE  256 (524)
T ss_dssp             -----CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC
T ss_pred             ccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec
Confidence            34567899999999877643    345667889999999996      57999999999999999976532         


Q ss_pred             --EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee-eeeeccccCccccceEEE--EEccCC-cEEEe
Q psy7482          89 --EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA-YITNLSSYGVGFENLDSV--VWSPEG-LLYAI  162 (327)
Q Consensus        89 --~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~--~~~~~~-~~l~~  162 (327)
                        ...+ .+|... |.+++|++++ .|++|+.||+|++||++++... ..+.     .|...|.++  .|+|++ .+|++
T Consensus       257 ~p~~~l-~~h~~~-v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~-----~H~~~V~sv~~~~s~~g~~~laS  328 (524)
T 2j04_B          257 KPSLTL-SLADSL-ITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQ-----VHDSYILSVSTAYSDFEDTVVST  328 (524)
T ss_dssp             SCSEEE-CCTTTC-EEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEE-----CSSSCEEEEEEECCTTSCCEEEE
T ss_pred             CceEEE-EcCCCC-EEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEee-----cccccEEEEEEEcCCCCCeEEEE
Confidence              1244 567776 9999999864 8999999999999999876432 2222     234569999  578887 88888


Q ss_pred             ec-CCeEEEEEecCCceeeEec-CC--CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEec
Q psy7482         163 PI-QNKAVVFSVEKAGVLQTLK-SE--SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSI  237 (327)
Q Consensus       163 ~~-~~~i~i~d~~~~~~~~~~~-~~--~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s  237 (327)
                      ++ |++|++||+++++....+. +.  ..+.+++|+|+ ..+++++.|++|++||++++..+..+.+|...|++++|  +
T Consensus       329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~--S  406 (524)
T 2j04_B          329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGV--S  406 (524)
T ss_dssp             EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEEC--C
T ss_pred             eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEe--C
Confidence            87 9999999999988766665 32  35889999998 78999999999999999999988889999999999999  4


Q ss_pred             CCCcEEEEecCCCeEEEEEcCC--------------------------------------------CceeEEeecccCce
Q psy7482         238 PQETTVCTGNEESAITAYNLTD--------------------------------------------GSHLWHIKASASRI  273 (327)
Q Consensus       238 ~~~~~l~~~~~d~~i~i~d~~~--------------------------------------------~~~~~~~~~~~~~v  273 (327)
                      |++++|++|+.|++|++||+..                                            +..+..+.+|...|
T Consensus       407 p~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V  486 (524)
T 2j04_B          407 RLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINI  486 (524)
T ss_dssp             SSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSC
T ss_pred             CCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceE
Confidence            9999999999999999987421                                            11223445678899


Q ss_pred             EEEeeeCc-----EEEEEecCCcEEEEEccCc
Q psy7482         274 KGLASHRN-----HLICITSAGDLVVWELNED  300 (327)
Q Consensus       274 ~~~~~~~~-----~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+++|+|.     .+|+|+.||.|+||++...
T Consensus       487 ~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~  518 (524)
T 2j04_B          487 TCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE  518 (524)
T ss_dssp             CCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred             EEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence            99999992     8999999999999999765

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=3.3e-41  Score=274.35  Aligned_cols=243  Identities=16%  Similarity=0.203  Sum_probs=198.3

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECC--CCCeEEEecCCCcEEEEEc
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw~~   83 (327)
                      +.+|.+.|++++|  ++++||+|+.|++|+|||+.+++  .+..+.+|.++|.+++|+|  ++++|++|+.|++|++||+
T Consensus         9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~   88 (316)
T 3bg1_A            9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE   88 (316)
T ss_dssp             -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred             cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence            3589999999999  89999999999999999998764  4677889999999999986  4899999999999999999


Q ss_pred             CCCe--EEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC---
Q psy7482          84 GSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE---  156 (327)
Q Consensus        84 ~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---  156 (327)
                      ++++  ....+ .+|... |.+++|+|+  +.+|++++.||.|++||++.+.....  ......|...+.+++|+|+   
T Consensus        89 ~~~~~~~~~~~-~~h~~~-V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~  164 (316)
T 3bg1_A           89 ENGTWEKSHEH-AGHDSS-VNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEV--KKINNAHTIGCNAVSWAPAVVP  164 (316)
T ss_dssp             SSSCCCEEEEE-CCCSSC-CCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEE--CCBTTSSSSCBCCCEECCCCCC
T ss_pred             CCCcceEEEEc-cCCCCc-eEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcce--eeeeccccCCcceEEEccccCC
Confidence            8874  44555 678777 999999997  78999999999999999987643211  1112234556899999997   


Q ss_pred             --------------CcEEEeec-CCeEEEEEecCC---ceeeEec-CCCceeEEEeecC-----ceEEEeCCCCcEEEEE
Q psy7482         157 --------------GLLYAIPI-QNKAVVFSVEKA---GVLQTLK-SESKVHSVCFLNE-----TTVCTGNEESAITAYN  212 (327)
Q Consensus       157 --------------~~~l~~~~-~~~i~i~d~~~~---~~~~~~~-~~~~i~~~~~~~~-----~~l~~~~~d~~i~i~d  212 (327)
                                    +++|++++ |+.|++||++..   +....+. |...|.+++|+|+     .+|++++.|++|++|+
T Consensus       165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~  244 (316)
T 3bg1_A          165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT  244 (316)
T ss_dssp             ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred             ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence                          36788887 999999999765   3455555 8889999999997     4799999999999999


Q ss_pred             cCCCc----eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         213 LTDGS----HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       213 ~~~~~----~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                      +++..    ....+..|...|.+++|+  |++++|++++.|+.|++|+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~v~~v~~s--p~g~~las~~~D~~v~lw~~~  292 (316)
T 3bg1_A          245 CDDASSNTWSPKLLHKFNDVVWHVSWS--ITANILAVSGGDNKVTLWKES  292 (316)
T ss_dssp             CSSTTCCCCBCCEEEECSSCEEEEEEC--TTTCCEEEEESSSCEEEEEEC
T ss_pred             ccCccccchhhhhhhcCCCcEEEEEEc--CCCCEEEEEcCCCeEEEEEEC
Confidence            87631    234456788999999995  999999999999999999976

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=1.3e-40  Score=274.27  Aligned_cols=287  Identities=14%  Similarity=0.201  Sum_probs=215.5

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccc----ccccccccccccEEEEEECC--CCCeEEEecCCCcEEEE
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIF   81 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~iw   81 (327)
                      +.+|.+.|++++|  ++++||+|+.||.|++||+.++    +....+.+|...|++++|+|  ++++|++++.||.|++|
T Consensus         7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw   86 (351)
T 3f3f_A            7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW   86 (351)
T ss_dssp             ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred             CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence            3589999999999  8999999999999999999876    45667788999999999999  69999999999999999


Q ss_pred             EcCCC---------eEEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccc--------cC
Q psy7482          82 RVGSW---------QLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSS--------YG  142 (327)
Q Consensus        82 ~~~~~---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--------~~  142 (327)
                      |+.++         +....+ ..|... |.+++|+|+  +.+|++++.||.|++||+++++....+....        ..
T Consensus        87 d~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  164 (351)
T 3f3f_A           87 EEDPDQEECSGRRWNKLCTL-NDSKGS-LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA  164 (351)
T ss_dssp             EECTTSCTTSSCSEEEEEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred             ecCCCcccccccCcceeeee-cccCCc-eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence            99876         456666 677777 999999999  9999999999999999999877554332211        12


Q ss_pred             ccccceEEEEEccC---CcEEEeec-CCeEEEEEecCCce--eeEec-CCCceeEEEeecC-----ceEEEeCCCCcEEE
Q psy7482         143 VGFENLDSVVWSPE---GLLYAIPI-QNKAVVFSVEKAGV--LQTLK-SESKVHSVCFLNE-----TTVCTGNEESAITA  210 (327)
Q Consensus       143 ~~~~~v~~~~~~~~---~~~l~~~~-~~~i~i~d~~~~~~--~~~~~-~~~~i~~~~~~~~-----~~l~~~~~d~~i~i  210 (327)
                      .+...+.+++|+|+   +.++++++ ++.+.+|+...++.  +..+. |...|.+++|+|+     .++++++.||.|++
T Consensus       165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i  244 (351)
T 3f3f_A          165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI  244 (351)
T ss_dssp             SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred             CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence            34456999999997   88888887 88887777777664  44454 7889999999998     47999999999999


Q ss_pred             EEcCCCceeEEeeecccceEEEEEEecCCCcEEEEe----cCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEE
Q psy7482         211 YNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG----NEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLI  284 (327)
Q Consensus       211 ~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~----~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~  284 (327)
                      ||++.+........+.........  ++....+..+    .....+.+|+....+.+..+.+|...|++++|+|  ++|+
T Consensus       245 wd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~  322 (351)
T 3f3f_A          245 FKITEKLSPLASEESLTNSNMFDN--SADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILS  322 (351)
T ss_dssp             EEEEECC-----------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEE
T ss_pred             EeCCCCcCccccCCcccceeccCC--CcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEE
Confidence            999876554443333333333332  1333333333    3445567777777788899999999999999999  8999


Q ss_pred             EEecCCcEEEEEccCc
Q psy7482         285 CITSAGDLVVWELNED  300 (327)
Q Consensus       285 ~~~~dg~v~iw~~~~~  300 (327)
                      +++.||.|++|++..+
T Consensus       323 s~~~dg~v~iw~~~~~  338 (351)
T 3f3f_A          323 SAGDDGKVRLWKATYS  338 (351)
T ss_dssp             EEETTSCEEEEEECTT
T ss_pred             EecCCCcEEEEecCcC
Confidence            9999999999999987

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=7.1e-41  Score=272.41  Aligned_cols=245  Identities=17%  Similarity=0.273  Sum_probs=200.0

Q ss_pred             ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEE
Q psy7482          49 ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRT  124 (327)
Q Consensus        49 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i  124 (327)
                      .+.+|.+.|++++|+|++++|++|+.|++|++||+.+++  ....+ .+|... |.+++|++  ++++|++++.|++|++
T Consensus         8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l-~gH~~~-V~~v~~~~~~~~~~l~s~s~D~~v~i   85 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADL-RGHEGP-VWQVAWAHPMYGNILASCSYDRKVII   85 (316)
T ss_dssp             ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEE-ECCSSC-EEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred             ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEE-cCCCcc-EEEEEeCCCCCCCEEEEEECCCEEEE
Confidence            456899999999999999999999999999999998775  34566 788887 99999976  4889999999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCcee---eEec-CCCceeEEEeecC-
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGVL---QTLK-SESKVHSVCFLNE-  196 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~~---~~~~-~~~~i~~~~~~~~-  196 (327)
                      ||+++++......+..   |...|.+++|+|+  +.+|++++ |+.|++||++.+...   ..+. |...+.+++|+|+ 
T Consensus        86 Wd~~~~~~~~~~~~~~---h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  162 (316)
T 3bg1_A           86 WREENGTWEKSHEHAG---HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV  162 (316)
T ss_dssp             ECCSSSCCCEEEEECC---CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred             EECCCCcceEEEEccC---CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence            9998875333333322   3456999999998  77888887 999999999876432   2233 7788999999986 


Q ss_pred             -----------------ceEEEeCCCCcEEEEEcCCC---ceeEEeeecccceEEEEEEecCCC----cEEEEecCCCeE
Q psy7482         197 -----------------TTVCTGNEESAITAYNLTDG---SHLWQIKASASRIKGLVFFSIPQE----TTVCTGNEESAI  252 (327)
Q Consensus       197 -----------------~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~~s~~~----~~l~~~~~d~~i  252 (327)
                                       .+|++|+.|+.|++||++..   +.+..+.+|...|.+++|+  |++    .+|++++.|+.|
T Consensus       163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~s--p~~~~~~~~las~s~D~~v  240 (316)
T 3bg1_A          163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWA--PSIGLPTSTIASCSQDGRV  240 (316)
T ss_dssp             CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECC--CCSSCSCCEEEEEETTCEE
T ss_pred             CCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEec--CCCCCCCceEEEEcCCCeE
Confidence                             47999999999999999755   4567788999999999995  765    899999999999


Q ss_pred             EEEEcCCCc----eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         253 TAYNLTDGS----HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       253 ~i~d~~~~~----~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++|++.+..    ....+..|...|.+++|+|  ++|++++.||.|++|+....
T Consensus       241 ~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~  294 (316)
T 3bg1_A          241 FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVD  294 (316)
T ss_dssp             EEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred             EEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence            999987631    2345567889999999999  89999999999999998754

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=2.1e-39  Score=277.78  Aligned_cols=276  Identities=16%  Similarity=0.280  Sum_probs=234.0

Q ss_pred             eeeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEEC--CCCCeEEEecCCCcEEEEEcC
Q psy7482           8 FVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFT--PEGSHLISCSDDGSIAIFRVG   84 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~iw~~~   84 (327)
                      ..+.+|.+.|.+++| .+.+|++|+.||+|++||+.+++.+..+.+|...|.+++|+  +++++|++|+.||.|++||+.
T Consensus       156 ~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~  235 (464)
T 3v7d_B          156 LQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP  235 (464)
T ss_dssp             EEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECC
T ss_pred             EEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCC
Confidence            344589999999999 45599999999999999999999999999999999999998  578899999999999999998


Q ss_pred             CCeE-----------------------EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc
Q psy7482          85 SWQL-----------------------EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY  141 (327)
Q Consensus        85 ~~~~-----------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  141 (327)
                      +++.                       ...+ .+|... +.++  +++++++++++.||.|++||+++++....+..   
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~---  308 (464)
T 3v7d_B          236 KESSVPDHGEEHDYPLVFHTPEENPYFVGVL-RGHMAS-VRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG---  308 (464)
T ss_dssp             CCCCC------CCSSEEESCGGGCTTEEEEE-CCCSSC-EEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECC---
T ss_pred             CCcccccccccCCcceEeeccCCCeEEEEEc-cCccce-EEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC---
Confidence            7653                       2233 566655 7665  57789999999999999999999887665533   


Q ss_pred             CccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCcee
Q psy7482         142 GVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHL  219 (327)
Q Consensus       142 ~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  219 (327)
                        +...+.+++|+|+++++++++ |+.|++||+++++.+..+. |...+.++++++ .++++++.||.|++||+++++..
T Consensus       309 --~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~  385 (464)
T 3v7d_B          309 --HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRK  385 (464)
T ss_dssp             --CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEE
T ss_pred             --CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCcee
Confidence              234599999999999999987 9999999999999999987 889999999974 79999999999999999988766


Q ss_pred             EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEE-eecccCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482         220 WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWH-IKASASRIKGLASHR-NHLICITSAGDLVVWEL  297 (327)
Q Consensus       220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~  297 (327)
                      .... +...+..+++.  ++++++++++ |+.|++||+.+++.+.. +..|...|.+++|++ .++++++.||.+.+|-+
T Consensus       386 ~~~~-~~~~~~~~~~~--~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~l  461 (464)
T 3v7d_B          386 FSYH-HTNLSAITTFY--VSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEIL  461 (464)
T ss_dssp             EEEE-CTTCCCEEEEE--ECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred             eeec-CCCCccEEEEE--eCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEEe
Confidence            5553 55667777885  8999999998 89999999999998876 678889999999999 56666667776555543

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=1.5e-39  Score=270.63  Aligned_cols=242  Identities=12%  Similarity=0.200  Sum_probs=213.0

Q ss_pred             cccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEc
Q psy7482          50 LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL  127 (327)
Q Consensus        50 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~  127 (327)
                      +..|..+|++++|+|++++|++++.|+.|++||+.+++  ....+ ..|... |.+++|+|++++|++++.||.|++||+
T Consensus         4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~~~~~dg~i~vwd~   81 (372)
T 1k8k_C            4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL-KEHNGQ-VTGVDWAPDSNRIVTCGTDRNAYVWTL   81 (372)
T ss_dssp             EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE-ECCSSC-EEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred             ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeee-cCCCCc-ccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence            34588999999999999999999999999999999887  77777 778877 999999999999999999999999999


Q ss_pred             CCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce---eeEec--CCCceeEEEeecC-ceEE
Q psy7482         128 VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV---LQTLK--SESKVHSVCFLNE-TTVC  200 (327)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~---~~~~~--~~~~i~~~~~~~~-~~l~  200 (327)
                      ++++.........+   ...+.+++|+|+++++++++ ++.+++||++.++.   ...+.  |...|.+++|+|+ .+++
T Consensus        82 ~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  158 (372)
T 1k8k_C           82 KGRTWKPTLVILRI---NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA  158 (372)
T ss_dssp             ETTEEEEEEECCCC---SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred             CCCeeeeeEEeecC---CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence            88876555443333   44599999999999999987 89999999998773   33332  6889999999998 7899


Q ss_pred             EeCCCCcEEEEEc------------------CCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         201 TGNEESAITAYNL------------------TDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       201 ~~~~d~~i~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      +++.|+.|++||+                  ..++.+..+..|...+.+++|+  |++++|++++.|+.|++||++++++
T Consensus       159 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~  236 (372)
T 1k8k_C          159 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS--ANGSRVAWVSHDSTVCLADADKKMA  236 (372)
T ss_dssp             EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC--SSSSEEEEEETTTEEEEEEGGGTTE
T ss_pred             EEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC--CCCCEEEEEeCCCEEEEEECCCCce
Confidence            9999999999995                  4677888888999999999995  8999999999999999999999999


Q ss_pred             eEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482         263 LWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       263 ~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~  299 (327)
                      +..+..|..+|.+++|+|  .+++++ .||.|++|++..
T Consensus       237 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~  274 (372)
T 1k8k_C          237 VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS  274 (372)
T ss_dssp             EEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred             eEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence            999999999999999999  555555 999999999988

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.5e-39  Score=266.78  Aligned_cols=265  Identities=15%  Similarity=0.231  Sum_probs=231.3

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN  126 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  126 (327)
                      ...+.+|...|++++|+|++++|++++.||.|++||+.+++....+ ..|... |.+++|+|++++|++++.||.|++||
T Consensus        25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~~~dg~i~iwd  102 (369)
T 3zwl_B           25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTL-DGHTGT-IWSIDVDCFTKYCVTGSADYSIKLWD  102 (369)
T ss_dssp             EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred             cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhh-hhcCCc-EEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence            3457889999999999999999999999999999999999999988 788887 99999999999999999999999999


Q ss_pred             cCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C-----CeEEEEEecCCce-----------eeEec-CCC--
Q psy7482         127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGV-----------LQTLK-SES--  186 (327)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~-----------~~~~~-~~~--  186 (327)
                      +.+++....+....      .+.+++|+|++++++++. +     +.|.+||+.....           ...+. +..  
T Consensus       103 ~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (369)
T 3zwl_B          103 VSNGQCVATWKSPV------PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD  176 (369)
T ss_dssp             TTTCCEEEEEECSS------CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred             CCCCcEEEEeecCC------CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence            99998877766333      399999999999999887 6     8999999987642           22222 333  


Q ss_pred             ceeEEEeecC-ceEEEeCCCCcEEEEEcCC-CceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE
Q psy7482         187 KVHSVCFLNE-TTVCTGNEESAITAYNLTD-GSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW  264 (327)
Q Consensus       187 ~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~  264 (327)
                      .+.+++|+|+ .++++++.||.|++||+++ .+.+..+..|...|.+++|+  |++++|++++.|+.|++||+.+++.+.
T Consensus       177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~v~d~~~~~~~~  254 (369)
T 3zwl_B          177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS--PDLTYFITSSRDTNSFLVDVSTLQVLK  254 (369)
T ss_dssp             CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC--TTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred             ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC--CCCCEEEEecCCceEEEEECCCCceee
Confidence            8999999999 7899999999999999998 77888899999999999995  899999999999999999999999888


Q ss_pred             EeecccCceEEEeeeC--cEEEEEecCC--------------cEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         265 HIKASASRIKGLASHR--NHLICITSAG--------------DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       265 ~~~~~~~~v~~~~~~~--~~l~~~~~dg--------------~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      .+. +...+..++|+|  +++++++.++              .+++||+....   .. .....|...|++++|+|+.
T Consensus       255 ~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~-~~~~~~~~~v~~~~~s~~~  327 (369)
T 3zwl_B          255 KYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE---EI-GRVQGHFGPLNTVAISPQG  327 (369)
T ss_dssp             EEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC---EE-EEEECCSSCEEEEEECTTS
T ss_pred             eec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc---ch-hheecccCcEEEEEECCCC
Confidence            888 677999999999  8999999888              89999998872   22 2234577889999999973

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.5e-40  Score=281.41  Aligned_cols=271  Identities=17%  Similarity=0.220  Sum_probs=219.8

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccc-ccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCC---CeEEE-eEEecc
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS---WQLEK-LFKKAH   96 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~---~~~~~-~~~~~~   96 (327)
                      +++.+++++      .|+ .+++.+..+ .+|.+.|++++|+| ++++|++|+.||.|++||+.+   +.... .....|
T Consensus        38 ~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h  110 (437)
T 3gre_A           38 IQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDC  110 (437)
T ss_dssp             CCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEEC
T ss_pred             ccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccC
Confidence            455555544      488 457778888 88999999999999 999999999999999999976   43221 221256


Q ss_pred             cCCceeeEEEecCCCEEEEEeCCCCEEEEEcC---CCceeeeeecccc-----Cc--cccceEEEE--EccCCcEEEeec
Q psy7482          97 KGTAVNHISIHPSGKLALSVGKDKTLRTWNLV---KGRSAYITNLSSY-----GV--GFENLDSVV--WSPEGLLYAIPI  164 (327)
Q Consensus        97 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~-----~~--~~~~v~~~~--~~~~~~~l~~~~  164 (327)
                      ... |.+++|+|++++|++++.||.|++||++   +++..........     ..  +...+.++.  +++++.++++++
T Consensus       111 ~~~-v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (437)
T 3gre_A          111 SST-VTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT  189 (437)
T ss_dssp             SSC-EEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE
T ss_pred             CCC-EEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe
Confidence            666 9999999999999999999999999995   4444332221100     00  233466666  667899999887


Q ss_pred             -CCeEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee-ecccceEEEEEEe--
Q psy7482         165 -QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK-ASASRIKGLVFFS--  236 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~--  236 (327)
                       |+.|++||+++++.+..+.   |...|.+++|+|+ .++++|+.||.|++||+++++.+..+. .|..+|.++++++  
T Consensus       190 ~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~  269 (437)
T 3gre_A          190 NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFY  269 (437)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTT
T ss_pred             CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecccc
Confidence             9999999999999988887   5789999999998 789999999999999999999988886 7888999997753  


Q ss_pred             cCCCcEEEEecCCCeEEEEEcCCCceeEEeec--------------------------ccCceEEEeeeC-cEEEEEecC
Q psy7482         237 IPQETTVCTGNEESAITAYNLTDGSHLWHIKA--------------------------SASRIKGLASHR-NHLICITSA  289 (327)
Q Consensus       237 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------------------------~~~~v~~~~~~~-~~l~~~~~d  289 (327)
                      ++++.+|++++.|+.|++||+++++.+..+.+                          |...|++++|++ ++|++++.|
T Consensus       270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d  349 (437)
T 3gre_A          270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEAT  349 (437)
T ss_dssp             CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGG
T ss_pred             CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCC
Confidence            26788999999999999999999998877764                          445678888888 799999999


Q ss_pred             CcEEEEEccCcc
Q psy7482         290 GDLVVWELNEDV  301 (327)
Q Consensus       290 g~v~iw~~~~~~  301 (327)
                      |.|++||+..+.
T Consensus       350 ~~i~~wd~~~~~  361 (437)
T 3gre_A          350 SSIVMFSLNELS  361 (437)
T ss_dssp             TEEEEEETTCGG
T ss_pred             CeEEEEECCCcc
Confidence            999999998873

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1e-39  Score=274.08  Aligned_cols=271  Identities=14%  Similarity=0.188  Sum_probs=228.0

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe------EEEeEEecccCCceeeEEEecC----C---CEE
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ------LEKLFKKAHKGTAVNHISIHPS----G---KLA  113 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~~~v~~~~~~~~----~---~~l  113 (327)
                      ...+.+|.+.|++++|+|  ++|++|+.||.|++||+.+++      ....+ ..|... |.+++|+|+    +   ++|
T Consensus         9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~g~~~~~l   84 (397)
T 1sq9_A            9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH-FVHKSG-LHHVDVLQAIERDAFELCLV   84 (397)
T ss_dssp             EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE-ECCTTC-EEEEEEEEEEETTTEEEEEE
T ss_pred             hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEE-ecCCCc-EEEEEEecccccCCccccEE
Confidence            456778999999999998  799999999999999999887      67777 678777 999999999    9   999


Q ss_pred             EEEeCCCCEEEEEcCCCce-----eeeeeccccCccccceEEEEEc----cCCcE-EEeec-CCeEEEEEecC------C
Q psy7482         114 LSVGKDKTLRTWNLVKGRS-----AYITNLSSYGVGFENLDSVVWS----PEGLL-YAIPI-QNKAVVFSVEK------A  176 (327)
Q Consensus       114 ~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~----~~~~~-l~~~~-~~~i~i~d~~~------~  176 (327)
                      ++++.||.|++||+.+++.     ...+...........|.+++|+    |++.+ +++++ |+.|++||+++      +
T Consensus        85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  164 (397)
T 1sq9_A           85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS  164 (397)
T ss_dssp             EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred             EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence            9999999999999988775     4333322100003559999999    99998 88886 99999999998      6


Q ss_pred             ceee-----Eec--------CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee---c---ccceEEEEEEec
Q psy7482         177 GVLQ-----TLK--------SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA---S---ASRIKGLVFFSI  237 (327)
Q Consensus       177 ~~~~-----~~~--------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~---~~~v~~~~~~~s  237 (327)
                      +.+.     .+.        +...+.+++|+|++.+++++.|+.|++||+++++.+..+..   |   ...+.+++|+  
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~--  242 (397)
T 1sq9_A          165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS--  242 (397)
T ss_dssp             TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC--
T ss_pred             ceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC--
Confidence            6655     552        68899999999988888999999999999999999999998   8   9999999995  


Q ss_pred             CCCcEEEEecCC---CeEEEEEcCCCceeEEeec-------------ccCceEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482         238 PQETTVCTGNEE---SAITAYNLTDGSHLWHIKA-------------SASRIKGLASHR--NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       238 ~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~  299 (327)
                      |++++|++++.|   +.|++||+.+++.+..+..             |...|.+++|+|  ++|++++.||.|++||+..
T Consensus       243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  322 (397)
T 1sq9_A          243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT  322 (397)
T ss_dssp             SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred             CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence            899999999999   9999999999999999998             999999999998  8999999999999999988


Q ss_pred             ccCCCceeeeec----CC---------------CCceEEEEeCCC
Q psy7482         300 DVTREPQRVSAT----ND---------------GCRFTCLAIRPP  325 (327)
Q Consensus       300 ~~~~~~~~~~~~----~~---------------~~~i~~l~~~p~  325 (327)
                      ..  ....+...    .+               ...|++++|+|+
T Consensus       323 ~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~  365 (397)
T 1sq9_A          323 KE--RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK  365 (397)
T ss_dssp             TE--EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred             Cc--eeEEEecccCcccchhhhhccccccccccCCceeEEEeccc
Confidence            72  22222200    34               788999999998

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=4.1e-39  Score=294.06  Aligned_cols=271  Identities=13%  Similarity=0.200  Sum_probs=237.7

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      +..+.+.+|.+.|++++|+|++++|++++.||.|++||+.+++....+ ..|... |.+++|+|++++|++++.||.|++
T Consensus         4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~v   81 (814)
T 3mkq_A            4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI-QVTETP-VRAGKFIARKNWIIVGSDDFRIRV   81 (814)
T ss_dssp             CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-ECCSSC-EEEEEEEGGGTEEEEEETTSEEEE
T ss_pred             ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEE-ecCCCc-EEEEEEeCCCCEEEEEeCCCeEEE
Confidence            345678899999999999999999999999999999999999999988 788877 999999999999999999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC-ceeeEec-CCCceeEEEeec-C-ceE
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA-GVLQTLK-SESKVHSVCFLN-E-TTV  199 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~-~~~~~~~-~~~~i~~~~~~~-~-~~l  199 (327)
                      ||+.+++....+..+     ...+.+++|+|+++++++++ |+.|++||++++ .....+. |...+.+++|+| + ..+
T Consensus        82 w~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  156 (814)
T 3mkq_A           82 FNYNTGEKVVDFEAH-----PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF  156 (814)
T ss_dssp             EETTTCCEEEEEECC-----SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred             EECCCCcEEEEEecC-----CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence            999999876665432     34599999999999999887 899999999987 5555665 888999999999 5 689


Q ss_pred             EEeCCCCcEEEEEcCCCceeEEeeecc-cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482         200 CTGNEESAITAYNLTDGSHLWQIKASA-SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       200 ~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      ++++.||.|++||+.+++....+..+. ..+..++|++.+++.++++++.||.|++||+.+++.+..+.+|...|.+++|
T Consensus       157 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~  236 (814)
T 3mkq_A          157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF  236 (814)
T ss_dssp             EEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred             EEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence            999999999999999888877776655 8899999964349999999999999999999999999999999999999999


Q ss_pred             eC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         279 HR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       279 ~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +|  ++|++++.||.|++||+.+..   .. .....+..++.+++|+|+.
T Consensus       237 ~~~~~~l~~~~~dg~v~vwd~~~~~---~~-~~~~~~~~~v~~~~~~~~~  282 (814)
T 3mkq_A          237 HPTLPIIISGSEDGTLKIWNSSTYK---VE-KTLNVGLERSWCIATHPTG  282 (814)
T ss_dssp             CSSSSEEEEEETTSCEEEEETTTCS---EE-EEECCSSSSEEEEEECTTC
T ss_pred             cCCCCEEEEEeCCCeEEEEECCCCc---EE-EEeecCCCcEEEEEEccCC
Confidence            99  899999999999999998872   21 2223456789999999973

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=8.1e-40  Score=273.55  Aligned_cols=273  Identities=11%  Similarity=0.110  Sum_probs=219.5

Q ss_pred             ccccccccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCCCeEEEeEEe-cccCCceeeEEEec-CCCEEEEEeCC
Q psy7482          43 KRKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSWQLEKLFKK-AHKGTAVNHISIHP-SGKLALSVGKD  119 (327)
Q Consensus        43 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d  119 (327)
                      ..+....+.+|...|++++|+|++ ++|++|+.||.|++||+.+++....+.. +|... |.+++|+| ++++|++++.|
T Consensus        62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~l~s~~~d  140 (383)
T 3ei3_B           62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDA-ITGMKFNQFNTNQLFVSSIR  140 (383)
T ss_dssp             TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCB-EEEEEEETTEEEEEEEEETT
T ss_pred             ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCc-eeEEEeCCCCCCEEEEEeCC
Confidence            344456677899999999999998 8999999999999999998887777632 57776 99999999 77999999999


Q ss_pred             CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-
Q psy7482         120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-  196 (327)
Q Consensus       120 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-  196 (327)
                      +.|++||++.. ....+..  ...+...+.+++|+|+++++++++ |+.|++||++ ++.+..+. |...|.+++|+|+ 
T Consensus       141 ~~i~iwd~~~~-~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~  216 (383)
T 3ei3_B          141 GATTLRDFSGS-VIQVFAK--TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRC  216 (383)
T ss_dssp             TEEEEEETTSC-EEEEEEC--CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSC
T ss_pred             CEEEEEECCCC-ceEEEec--cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCC
Confidence            99999999853 3333222  222345699999999999999997 9999999994 66666666 8899999999998 


Q ss_pred             c-eEEEeCCCCcEEEEEcCC----CceeEEeeecccceEEEEEEecC-CCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         197 T-TVCTGNEESAITAYNLTD----GSHLWQIKASASRIKGLVFFSIP-QETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       197 ~-~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      . ++++++.|+.|++||+++    +..+..+ .|...+.+++|+  | ++++|++++.|+.|++||+++++.+..+.+|.
T Consensus       217 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s--~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  293 (383)
T 3ei3_B          217 DWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFN--PTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHP  293 (383)
T ss_dssp             TTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEEC--TTTSCEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred             CCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEc--CCCCCEEEEEcCCCcEEEEECCCCcccccccccc
Confidence            4 899999999999999987    5556655 699999999995  8 99999999999999999999988777776553


Q ss_pred             -----------------CceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         271 -----------------SRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       271 -----------------~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                                       ..+..++|+| ..+ +++.||.|++||+.++.  ....+....+...+.+++|+|+.
T Consensus       294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~--~~~~l~~~~~~~~~~~~~~s~~g  364 (383)
T 3ei3_B          294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGG--LVHQLRDPNAAGIISLNKFSPTG  364 (383)
T ss_dssp             BCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCC--EEEEECBTTBCSCCCEEEECTTS
T ss_pred             ccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCc--eeeeecCCCCCceEEEEEEecCc
Confidence                             2333355555 222 77789999999998873  33334333356778888999974

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=3e-39  Score=271.74  Aligned_cols=274  Identities=18%  Similarity=0.279  Sum_probs=222.6

Q ss_pred             EEEEeCCCE---EEEecCCCeEEEEEcccc----ccccccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCC---
Q psy7482          18 RSVAATSKL---AASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSW---   86 (327)
Q Consensus        18 ~~~~~~~~~---l~~~~~dg~v~~w~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~---   86 (327)
                      ..++++.+.   +++++.||.|+||++.+.    +....+.+|.+.|++++|+| ++++|++|+.||.|++||+.++   
T Consensus        38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~  117 (402)
T 2aq5_A           38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV  117 (402)
T ss_dssp             CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred             CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence            345664443   335788999999998654    34456778999999999999 9999999999999999999887   


Q ss_pred             ----eEEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          87 ----QLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        87 ----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                          +....+ .+|... |.+++|+|++ .+|++++.||.|++||+++++....+....   +...+.+++|+|++++|+
T Consensus       118 ~~~~~~~~~~-~~h~~~-v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~  192 (402)
T 2aq5_A          118 LPLREPVITL-EGHTKR-VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV---HPDTIYSVDWSRDGALIC  192 (402)
T ss_dssp             SCBCSCSEEE-ECCSSC-EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT---CCSCEEEEEECTTSSCEE
T ss_pred             cccCCceEEe-cCCCCe-EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC---CCCceEEEEECCCCCEEE
Confidence                556677 788887 9999999997 699999999999999999988766552122   244599999999999999


Q ss_pred             eec-CCeEEEEEecCCceeeEe-c-CCCc-eeEEEeecC-ceEEEe---CCCCcEEEEEcCCCce-eEEee-ecccceEE
Q psy7482         162 IPI-QNKAVVFSVEKAGVLQTL-K-SESK-VHSVCFLNE-TTVCTG---NEESAITAYNLTDGSH-LWQIK-ASASRIKG  231 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~~~~~~-~-~~~~-i~~~~~~~~-~~l~~~---~~d~~i~i~d~~~~~~-~~~~~-~~~~~v~~  231 (327)
                      +++ |+.|++||+++++.+..+ . +... +.++.|+|+ .++++|   +.|+.|++||+++++. +.... .|...+.+
T Consensus       193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~  272 (402)
T 2aq5_A          193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLL  272 (402)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEE
T ss_pred             EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeE
Confidence            887 999999999999998888 4 5544 899999999 667777   7999999999988664 33332 46778999


Q ss_pred             EEEEecCCCcEEE-EecCCCeEEEEEcCCCce-eEEeec--ccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         232 LVFFSIPQETTVC-TGNEESAITAYNLTDGSH-LWHIKA--SASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       232 ~~~~~s~~~~~l~-~~~~d~~i~i~d~~~~~~-~~~~~~--~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++|+  |++++|+ +++.|+.|++||+.++++ +..+..  |..+|.+++|+|  .+++  +.++.+++|++..+
T Consensus       273 ~~~s--~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~--s~~~~~~~~~l~~~  343 (402)
T 2aq5_A          273 PFFD--PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEV--NKCEIARFYKLHER  343 (402)
T ss_dssp             EEEE--TTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCG--GGTEEEEEEEEETT
T ss_pred             EEEc--CCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccce--ecceeEEEEEcCCC
Confidence            9995  8999886 566899999999998884 555554  458999999999  4443  46779999999876

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.5e-38  Score=254.66  Aligned_cols=264  Identities=13%  Similarity=0.145  Sum_probs=222.7

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      +....+.+|.+.|++++| |++++|++++.||.|++||+.+++....+ ..|... |.+++|+|++++|++++.||.+++
T Consensus         9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~~   85 (313)
T 3odt_A            9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVV-YTGQGF-LNSVCYDSEKELLLFGGKDTMING   85 (313)
T ss_dssp             EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEE-EECSSC-EEEEEEETTTTEEEEEETTSCEEE
T ss_pred             HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEe-ecCCcc-EEEEEECCCCCEEEEecCCCeEEE
Confidence            667788999999999999 99999999999999999999998888887 777777 999999999999999999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeec-C-ceEE
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLN-E-TTVC  200 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~-~-~~l~  200 (327)
                      |++.........  .....+...+.+++|  ++.++++++ |+.|++||  .++....+. +...+.++++.| + +.++
T Consensus        86 ~~~~~~~~~~~~--~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  159 (313)
T 3odt_A           86 VPLFATSGEDPL--YTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFL  159 (313)
T ss_dssp             EETTCCTTSCC---CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred             EEeeecCCCCcc--cchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence            998765322111  111223456999999  466777776 99999999  566666666 889999999998 5 8999


Q ss_pred             EeCCCCcEEEEEcCCCceeEEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeee
Q psy7482         201 TGNEESAITAYNLTDGSHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASH  279 (327)
Q Consensus       201 ~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  279 (327)
                      +++.|+.|++||  ..+....+.. |...+.+++|.  |++. +++++.|+.|++||+++++++..+.+|...|.+++|+
T Consensus       160 ~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~--~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~  234 (313)
T 3odt_A          160 TASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVV--DDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLL  234 (313)
T ss_dssp             EEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEE--ETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred             EEECCCCEEEEe--cCceEEEEeccCcccEEEEEEc--CCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEe
Confidence            999999999999  4556677766 88999999996  6777 9999999999999999999999999999999999999


Q ss_pred             C-cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         280 R-NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       280 ~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      | ..|++++.||.|++||+..+.  ....  ...+...|++++|+|+.
T Consensus       235 ~~~~l~~~~~dg~v~iwd~~~~~--~~~~--~~~~~~~i~~~~~~~~~  278 (313)
T 3odt_A          235 PNGDIVSCGEDRTVRIWSKENGS--LKQV--ITLPAISIWSVDCMSNG  278 (313)
T ss_dssp             TTSCEEEEETTSEEEEECTTTCC--EEEE--EECSSSCEEEEEECTTS
T ss_pred             cCCCEEEEecCCEEEEEECCCCc--eeEE--EeccCceEEEEEEccCC
Confidence            9 689999999999999998882  2222  23456689999999973

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=1.7e-38  Score=284.90  Aligned_cols=243  Identities=17%  Similarity=0.304  Sum_probs=209.4

Q ss_pred             cccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCCC-----eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC
Q psy7482          48 GALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSW-----QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT  121 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  121 (327)
                      ..+.+|.+.|++++|+|++ ++|++|+.|++|++|++.+.     .....+ .+|... |.+++|+|++++|++|+.||.
T Consensus       376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~-~~h~~~-v~~v~~s~~g~~l~sgs~Dg~  453 (694)
T 3dm0_A          376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRL-TGHSHF-VEDVVLSSDGQFALSGSWDGE  453 (694)
T ss_dssp             EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEE-ECCSSC-EEEEEECTTSSEEEEEETTSE
T ss_pred             hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccccccee-cCCCCc-EEEEEECCCCCEEEEEeCCCc
Confidence            4577899999999999864 78999999999999999753     344556 788888 999999999999999999999


Q ss_pred             EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe----cCCCceeEEEeecC
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL----KSESKVHSVCFLNE  196 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~----~~~~~i~~~~~~~~  196 (327)
                      |++||+.+++....+..     |...|.+++|+|+++++++++ |+.|++||..........    .|...|.+++|+|+
T Consensus       454 v~vwd~~~~~~~~~~~~-----h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~  528 (694)
T 3dm0_A          454 LRLWDLAAGVSTRRFVG-----HTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN  528 (694)
T ss_dssp             EEEEETTTTEEEEEEEC-----CSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred             EEEEECCCCcceeEEeC-----CCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence            99999999877655433     344599999999999999987 999999998755443332    26778999999997


Q ss_pred             ---ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCce
Q psy7482         197 ---TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRI  273 (327)
Q Consensus       197 ---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v  273 (327)
                         ..+++++.|+.|++||+++++....+.+|...|++++|+  |++++|++++.|+.|++||+.+++.+..+..+ ..|
T Consensus       529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s--pdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v  605 (694)
T 3dm0_A          529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS--PDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVI  605 (694)
T ss_dssp             SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCE
T ss_pred             CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe--CCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcE
Confidence               379999999999999999999999999999999999995  99999999999999999999999988887754 589


Q ss_pred             EEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         274 KGLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       274 ~~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+++|+| ..+++++.|+.|++||+...
T Consensus       606 ~~~~~sp~~~~l~~~~~~~i~iwd~~~~  633 (694)
T 3dm0_A          606 HALCFSPNRYWLCAATEHGIKIWDLESK  633 (694)
T ss_dssp             EEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred             EEEEEcCCCcEEEEEcCCCEEEEECCCC
Confidence            9999999 55556666788999999887

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.8e-39  Score=266.58  Aligned_cols=250  Identities=17%  Similarity=0.271  Sum_probs=209.0

Q ss_pred             cccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC--CCeEEEeEEecccCCceeeEEEecC--CCEEEEEeCC
Q psy7482          44 RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG--SWQLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKD  119 (327)
Q Consensus        44 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d  119 (327)
                      |+++..+.+|...|++++|+|++++|++|+.||.|++||+.  +++....+ ..|... |.+++|+++  +++|++++.|
T Consensus         1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~~l~s~~~d   78 (379)
T 3jrp_A            1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGP-VWRVDWAHPKFGTILASCSYD   78 (379)
T ss_dssp             ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSC-EEEEEECCGGGCSEEEEEETT
T ss_pred             CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEe-cCCCCc-EEEEEeCCCCCCCEEEEeccC
Confidence            35667888999999999999999999999999999999998  55666666 778877 999999976  8999999999


Q ss_pred             CCEEEEEcCCCceeeeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCceee--Ee-cCCCceeEEEe
Q psy7482         120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGVLQ--TL-KSESKVHSVCF  193 (327)
Q Consensus       120 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~~~--~~-~~~~~i~~~~~  193 (327)
                      |.|++||+++++.........+   ...+.+++|+|+  +.++++++ |+.|++||++++....  .+ .+...|.+++|
T Consensus        79 g~v~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~  155 (379)
T 3jrp_A           79 GKVLIWKEENGRWSQIAVHAVH---SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW  155 (379)
T ss_dssp             SCEEEEEEETTEEEEEEEECCC---SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred             CEEEEEEcCCCceeEeeeecCC---CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence            9999999998874333333322   445999999999  88888887 9999999998874332  33 38889999999


Q ss_pred             ec-------------C-ceEEEeCCCCcEEEEEcCCCc----eeEEeeecccceEEEEEEecCC---CcEEEEecCCCeE
Q psy7482         194 LN-------------E-TTVCTGNEESAITAYNLTDGS----HLWQIKASASRIKGLVFFSIPQ---ETTVCTGNEESAI  252 (327)
Q Consensus       194 ~~-------------~-~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~s~~---~~~l~~~~~d~~i  252 (327)
                      +|             + .++++++.|+.|++||+++++    ....+.+|...|.+++|+  |+   +++|++++.||.|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s--p~~~~~~~l~s~~~dg~i  233 (379)
T 3jrp_A          156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS--PTVLLRSYLASVSQDRTC  233 (379)
T ss_dssp             CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC--CCCSSSEEEEEEETTSCE
T ss_pred             cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC--CCCCCCCeEEEEeCCCEE
Confidence            99             5 789999999999999998765    345677899999999995  88   8999999999999


Q ss_pred             EEEEcCCCc-----eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         253 TAYNLTDGS-----HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       253 ~i~d~~~~~-----~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++||+.++.     .+.....|...|.+++|+|  ++|++++.||.|++|++...
T Consensus       234 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          234 IIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  288 (379)
T ss_dssp             EEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred             EEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence            999999874     2223334888999999999  89999999999999999854

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-38  Score=265.13  Aligned_cols=246  Identities=15%  Similarity=0.246  Sum_probs=208.6

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcc--ccccccccccccccEEEEEECCC--CCeEEEecCCCcEEEEE
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIFR   82 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~   82 (327)
                      .+.+|.+.|++++|  ++++||+|+.||.|++||+.  +++....+.+|...|++++|+|+  +++|++++.||.|++||
T Consensus         6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd   85 (379)
T 3jrp_A            6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK   85 (379)
T ss_dssp             CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred             EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence            34589999999999  89999999999999999998  66778889999999999999987  89999999999999999


Q ss_pred             cCCCe--EEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc---
Q psy7482          83 VGSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP---  155 (327)
Q Consensus        83 ~~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---  155 (327)
                      +.+++  ....+ ..|... |.+++|+|+  +.+|++++.||.|++||++++..........+   ...+.+++|+|   
T Consensus        86 ~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~  160 (379)
T 3jrp_A           86 EENGRWSQIAVH-AVHSAS-VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH---AIGVNSASWAPATI  160 (379)
T ss_dssp             EETTEEEEEEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC---TTCEEEEEECCCC-
T ss_pred             cCCCceeEeeee-cCCCcc-eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC---CCceEEEEEcCccc
Confidence            99887  55555 567776 999999998  99999999999999999998755444333332   45599999999   


Q ss_pred             ----------CCcEEEeec-CCeEEEEEecCCce----eeEec-CCCceeEEEeecC----ceEEEeCCCCcEEEEEcCC
Q psy7482         156 ----------EGLLYAIPI-QNKAVVFSVEKAGV----LQTLK-SESKVHSVCFLNE----TTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       156 ----------~~~~l~~~~-~~~i~i~d~~~~~~----~~~~~-~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~  215 (327)
                                ++.++++++ |+.|++||+++++.    ...+. |...|.+++|+|+    .++++++.||.|++||+++
T Consensus       161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~  240 (379)
T 3jrp_A          161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN  240 (379)
T ss_dssp             ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred             cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence                      688888887 99999999987653    34444 7889999999997    5788999999999999988


Q ss_pred             Cce-----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         216 GSH-----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       216 ~~~-----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      +..     +.....|...+.+++|+  |++++|++++.||.|++|++..+.
T Consensus       241 ~~~~~~~~~~~~~~~~~~v~~~~~s--~~g~~l~~~~~dg~i~iw~~~~~~  289 (379)
T 3jrp_A          241 EQGPWKKTLLKEEKFPDVLWRASWS--LSGNVLALSGGDNKVTLWKENLEG  289 (379)
T ss_dssp             TTSCCEEEESSSSCCSSCEEEEEEC--SSSCCEEEEESSSSEEEEEEEETT
T ss_pred             CCccceeeeeccccCCCcEEEEEEc--CCCCEEEEecCCCcEEEEeCCCCC
Confidence            642     22234488899999995  999999999999999999998654

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=3.2e-38  Score=266.95  Aligned_cols=262  Identities=17%  Similarity=0.268  Sum_probs=218.5

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      ++.+.+.+++|...|++++|  +|++||+|+.||+|++||+.+++.+..+.+|...+.++.++  +..|++|+.|+.+++
T Consensus       136 ~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~  213 (420)
T 4gga_A          136 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHH  213 (420)
T ss_dssp             CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEE
T ss_pred             CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeE
Confidence            35667788899999999999  89999999999999999999999999999999999998875  679999999999999


Q ss_pred             EEcCCCe-EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-
Q psy7482          81 FRVGSWQ-LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-  158 (327)
Q Consensus        81 w~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-  158 (327)
                      ||..... ....+ .+|... +..+.|+|+++++++++.|+.+++|+..+++..... ......+...|.+++|+|.+. 
T Consensus       214 ~d~~~~~~~~~~~-~~h~~~-~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~-~~~~~~~~~~V~~~~~~p~~~~  290 (420)
T 4gga_A          214 HDVRVAEHHVATL-SGHSQE-VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP-LQTFTQHQGAVKAVAWCPWQSN  290 (420)
T ss_dssp             EETTSSSCEEEEE-ECCSSC-EEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCC-SEEECCCSSCEEEEEECTTCTT
T ss_pred             eeecccceeeEEe-cccccc-eeeeeecCCCCeeeeeeccccceEEeecccccccee-eeeecccCCceeeeeeCCCccc
Confidence            9997654 44555 788887 999999999999999999999999999877543211 111223345699999999664 


Q ss_pred             EEEee--c-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEe--CCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482         159 LYAIP--I-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTG--NEESAITAYNLTDGSHLWQIKASASRIKGL  232 (327)
Q Consensus       159 ~l~~~--~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  232 (327)
                      +++++  + |+.|++||+.+++....+.....+.++.|+|+ +.++++  +.|+.|++||+.+++++.++.+|...|+++
T Consensus       291 ~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l  370 (420)
T 4gga_A          291 VLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL  370 (420)
T ss_dssp             EEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred             EEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEE
Confidence            55543  3 89999999999999999998889999999998 666554  479999999999999999999999999999


Q ss_pred             EEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC
Q psy7482         233 VFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS  271 (327)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  271 (327)
                      +|+  |+|++|++|+.|++|++||+.+..+....+.+..
T Consensus       371 ~~s--pdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~  407 (420)
T 4gga_A          371 TMS--PDGATVASAAADETLRLWRCFELDPARRREREKA  407 (420)
T ss_dssp             EEC--TTSSCEEEEETTTEEEEECCSCSSCC--------
T ss_pred             EEc--CCCCEEEEEecCCeEEEEECCCCCccchhhhccC
Confidence            994  9999999999999999999988766665555443

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=271.69  Aligned_cols=244  Identities=11%  Similarity=0.138  Sum_probs=201.9

Q ss_pred             cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe-----------EEEeEEeccc------------CCceeeEEEec
Q psy7482          52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-----------LEKLFKKAHK------------GTAVNHISIHP  108 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-----------~~~~~~~~~~------------~~~v~~~~~~~  108 (327)
                      .+.+.|++++|+|++++|++|+.||.|++||+.+++           ....+ .+|.            .. |.+++|+|
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~h~~~~~~~~~~~~~~~-V~~l~~~~  103 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTF-QSHEPEFDYLKSLEIEEK-INKIRWLP  103 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEE-ECCCCEEEGGGTEEECCC-CCEEEECC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccc-ccccccccccccccccCc-eEEEEEcC
Confidence            367899999999999999999999999999998776           46666 6776            66 99999999


Q ss_pred             CC--CEEEEEeCCCCEEEEEcCCCceeeee-------------------e----------------ccccCccccceEEE
Q psy7482         109 SG--KLALSVGKDKTLRTWNLVKGRSAYIT-------------------N----------------LSSYGVGFENLDSV  151 (327)
Q Consensus       109 ~~--~~l~~~~~dg~i~iwd~~~~~~~~~~-------------------~----------------~~~~~~~~~~v~~~  151 (327)
                      ++  ..|++++.||.|++||+.+++.....                   .                ......|...|.++
T Consensus       104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~  183 (447)
T 3dw8_B          104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI  183 (447)
T ss_dssp             CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred             CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence            98  79999999999999999765432100                   0                00012356679999


Q ss_pred             EEccCCcEEEeecCCeEEEEEecC-CceeeEe--------cCCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCce--
Q psy7482         152 VWSPEGLLYAIPIQNKAVVFSVEK-AGVLQTL--------KSESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSH--  218 (327)
Q Consensus       152 ~~~~~~~~l~~~~~~~i~i~d~~~-~~~~~~~--------~~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~--  218 (327)
                      +|+|++++|+++.|+.|++||+++ ++....+        .|...|.+++|+|+  .++++++.||.|++||+++++.  
T Consensus       184 ~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~  263 (447)
T 3dw8_B          184 SINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD  263 (447)
T ss_dssp             EECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred             EEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence            999999999998899999999984 4444432        37889999999997  5899999999999999999886  


Q ss_pred             --eEEeeeccc------------ceEEEEEEecCCCcEEEEecCCCeEEEEEcCC-CceeEEeecccCc-----------
Q psy7482         219 --LWQIKASAS------------RIKGLVFFSIPQETTVCTGNEESAITAYNLTD-GSHLWHIKASASR-----------  272 (327)
Q Consensus       219 --~~~~~~~~~------------~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~-----------  272 (327)
                        +..+..|..            .|.+++|+  |++++|++++. +.|++||+++ ++++..+.+|...           
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~  340 (447)
T 3dw8_B          264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFS--HSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND  340 (447)
T ss_dssp             TTCEEECCC-----CCHHHHHTTCEEEEEEC--TTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred             ceeeEeccCCCccccccccccCceEEEEEEC--CCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence              678888876            89999995  99999999999 9999999997 8888888888642           


Q ss_pred             ----eEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         273 ----IKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       273 ----v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                          +..++|+|  ++|++++.||.|++||+..+
T Consensus       341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~  374 (447)
T 3dw8_B          341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK  374 (447)
T ss_dssp             GGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred             ccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence                23489999  89999999999999999887

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=3e-38  Score=261.33  Aligned_cols=269  Identities=13%  Similarity=0.176  Sum_probs=216.7

Q ss_pred             ccccccccEEEEEECCCCCeE-EEecC---CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC---CCEEEEEeCCCC
Q psy7482          49 ALMQHEGTITCLKFTPEGSHL-ISCSD---DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS---GKLALSVGKDKT  121 (327)
Q Consensus        49 ~~~~~~~~v~~~~~~~~~~~l-~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~  121 (327)
                      .+.+|...|.+++|+|++..+ ++|+.   |+.|++||+.+++........|... |.+++|+|+   +++|++++.||.
T Consensus        13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~l~~~~~dg~   91 (357)
T 3i2n_A           13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKP-IKCGTFGATSLQQRYLATGDFGGN   91 (357)
T ss_dssp             EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSC-EEEEECTTCCTTTCCEEEEETTSC
T ss_pred             hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCc-EEEEEEcCCCCCCceEEEecCCCe
Confidence            456799999999999998655 56665   8999999999988776664567766 999999998   699999999999


Q ss_pred             EEEEEcCCCc-eeeeeeccccCccccceEEEE------EccCCcEEEeec-CCeEEEEEecCCc-eeeEec-C----CCc
Q psy7482         122 LRTWNLVKGR-SAYITNLSSYGVGFENLDSVV------WSPEGLLYAIPI-QNKAVVFSVEKAG-VLQTLK-S----ESK  187 (327)
Q Consensus       122 i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~-~~~i~i~d~~~~~-~~~~~~-~----~~~  187 (327)
                      |++||+.+++ ....+.     .+...+.++.      |+|+++++++++ |+.|++||+++++ .+..+. +    ...
T Consensus        92 i~iwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~  166 (357)
T 3i2n_A           92 LHIWNLEAPEMPVYSVK-----GHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD  166 (357)
T ss_dssp             EEEECTTSCSSCSEEEC-----CCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred             EEEEeCCCCCccEEEEE-----ecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence            9999999877 444433     2344588985      578899999887 9999999999887 666665 2    337


Q ss_pred             eeEEE----eecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecC---CCcEEEEecCCCeEEEEEcCC
Q psy7482         188 VHSVC----FLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIP---QETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       188 i~~~~----~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~---~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      +.+++    |+|+ .++++++.|+.|++||+++++... ...|...+.+++|+  |   ++.++++++.||.|++||+++
T Consensus       167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~--~~~~~~~~l~~~~~dg~i~i~d~~~  243 (357)
T 3i2n_A          167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFD--RKDISMNKLVATSLEGKFHVFDMRT  243 (357)
T ss_dssp             EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEES--CSSSSCCEEEEEESTTEEEEEEEEE
T ss_pred             eEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcC--CCCCCCCEEEEECCCCeEEEEeCcC
Confidence            88888    6677 789999999999999999987744 46688899999995  7   899999999999999999988


Q ss_pred             CceeEEee-----cccCceEEEeeeC--c-EEEEEecCCcEEEEEccCccCCC---------------ceeeeecCCCCc
Q psy7482         260 GSHLWHIK-----ASASRIKGLASHR--N-HLICITSAGDLVVWELNEDVTRE---------------PQRVSATNDGCR  316 (327)
Q Consensus       260 ~~~~~~~~-----~~~~~v~~~~~~~--~-~l~~~~~dg~v~iw~~~~~~~~~---------------~~~~~~~~~~~~  316 (327)
                      ++.+..+.     +|...|++++|+|  + +|++++.||.|++||+.......               ........|...
T Consensus       244 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  323 (357)
T 3i2n_A          244 QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQP  323 (357)
T ss_dssp             EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSC
T ss_pred             CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCC
Confidence            77655444     8999999999999  4 89999999999999998763110               112223457788


Q ss_pred             eEEEEeCCCC
Q psy7482         317 FTCLAIRPPV  326 (327)
Q Consensus       317 i~~l~~~p~~  326 (327)
                      |++++|+|+.
T Consensus       324 v~~~~~s~~~  333 (357)
T 3i2n_A          324 ISSLDWSPDK  333 (357)
T ss_dssp             EEEEEECSSS
T ss_pred             eeEEEEcCCC
Confidence            9999999973

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=7e-39  Score=272.12  Aligned_cols=267  Identities=13%  Similarity=0.126  Sum_probs=208.4

Q ss_pred             ccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCeEEEeEE-ecccCCceeeEEEec-CCCEEEEEeCCCCEEEE
Q psy7482          49 ALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFK-KAHKGTAVNHISIHP-SGKLALSVGKDKTLRTW  125 (327)
Q Consensus        49 ~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw  125 (327)
                      ....|...|++|+|+| ++++||+|+.||.|+|||+.+++....+. .+|.+. |++++|+| ++++|++++.||+|++|
T Consensus       114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~-V~~l~f~p~~~~~l~s~s~D~~v~iw  192 (435)
T 4e54_B          114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGS-ITGLKFNPLNTNQFYASSMEGTTRLQ  192 (435)
T ss_dssp             EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCC-CCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred             cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCC-EEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence            3456888999999999 56799999999999999998776544331 567777 99999998 78999999999999999


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC--ceEEE
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE--TTVCT  201 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~--~~l~~  201 (327)
                      |++++.........   .....+.+++|+|+++++++|+ ||.|++||++.. .+..+. |...|.+++|+|+  .++++
T Consensus       193 d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s  268 (435)
T 4e54_B          193 DFKGNILRVFASSD---TINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLAT  268 (435)
T ss_dssp             ETTSCEEEEEECCS---SCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred             eccCCceeEEeccC---CCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEE
Confidence            99865443322222   2233478999999999999997 999999998754 445555 8899999999997  47889


Q ss_pred             eCCCCcEEEEEcCCCceeEE---eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC------c
Q psy7482         202 GNEESAITAYNLTDGSHLWQ---IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS------R  272 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~---~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~  272 (327)
                      ++.|+.|++||+++.+....   ..+|..+|++++|+  |++.+|++++.|+.|++||+.+++....+..|..      .
T Consensus       269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~s--pdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~  346 (435)
T 4e54_B          269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFS--PDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLT  346 (435)
T ss_dssp             EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBC--TTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSC
T ss_pred             ecCcceeeEEecccccccceEEEeeeccccccceeEC--CCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccce
Confidence            99999999999988765433   36799999999994  9999999999999999999999988877776642      2


Q ss_pred             eEEEeeeC--cEEEEEe------------cCCcEEEEEccCccCCCceeeeecCCCCceEEE-EeCCC
Q psy7482         273 IKGLASHR--NHLICIT------------SAGDLVVWELNEDVTREPQRVSATNDGCRFTCL-AIRPP  325 (327)
Q Consensus       273 v~~~~~~~--~~l~~~~------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l-~~~p~  325 (327)
                      +....|+|  ..+++++            .++.|++||..++   .........+...|.++ +|+|+
T Consensus       347 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g---~~~~~l~~~~~~~v~s~~~fspd  411 (435)
T 4e54_B          347 PIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG---KMMCQLYDPESSGISSLNEFNPM  411 (435)
T ss_dssp             CCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC---CEEEEECCSSCCCCCCEEEECTT
T ss_pred             eEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC---cEEEEEeCCCCCcEEEEEEECCC
Confidence            33455666  5555543            3457999999888   23222233566778887 69987

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=2.9e-38  Score=262.22  Aligned_cols=266  Identities=10%  Similarity=0.121  Sum_probs=220.3

Q ss_pred             cccccccEEEEEECCC----CCeEEEecCCCcEEEEEcCCCeEEEeEEec-----ccCCceeeEEEecC----CCEEEEE
Q psy7482          50 LMQHEGTITCLKFTPE----GSHLISCSDDGSIAIFRVGSWQLEKLFKKA-----HKGTAVNHISIHPS----GKLALSV  116 (327)
Q Consensus        50 ~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~----~~~l~~~  116 (327)
                      ..+|..+|++++|+|+    ...+++++.++.|++||+.+++.+..+ ..     |... |.+++|+|+    +++|+++
T Consensus        14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~-~~~~~~~~~~~-v~~~~~~~~~~~~~~~l~~~   91 (366)
T 3k26_A           14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLL-QSYVDADADEN-FYTCAWTYDSNTSHPLLAVA   91 (366)
T ss_dssp             ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEE-EEEECSCTTCC-EEEEEEEECTTTCCEEEEEE
T ss_pred             ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEee-eeccccCCCCc-EEEEEeccCCCCCCCEEEEe
Confidence            3479999999999984    456677777779999999988776666 32     3344 999999998    6799999


Q ss_pred             eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCCceeeEe----cCCCceeE
Q psy7482         117 GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTL----KSESKVHS  190 (327)
Q Consensus       117 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~----~~~~~i~~  190 (327)
                      +.||.|++||+.+++....+..+     ...|.+++|+| +++++++++ |+.|++||+++++.+..+    .+...|.+
T Consensus        92 ~~dg~i~v~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~  166 (366)
T 3k26_A           92 GSRGIIRIINPITMQCIKHYVGH-----GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS  166 (366)
T ss_dssp             ETTCEEEEECTTTCCEEEEEESC-----CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred             cCCCEEEEEEchhceEeeeecCC-----CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence            99999999999998876665422     34599999999 889999887 999999999999998887    38899999


Q ss_pred             EEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee----------------------------cccceEEEEEEecCCCc
Q psy7482         191 VCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA----------------------------SASRIKGLVFFSIPQET  241 (327)
Q Consensus       191 ~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~----------------------------~~~~v~~~~~~~s~~~~  241 (327)
                      ++|+|+ .++++++.||.|++||+++++.+..+..                            |...|.+++|.    ++
T Consensus       167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~  242 (366)
T 3k26_A          167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL----GD  242 (366)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE----TT
T ss_pred             EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc----CC
Confidence            999998 7999999999999999998765544433                            88999999993    77


Q ss_pred             EEEEecCCCeEEEEEcCCCce--------------eEEeecccCceEEEeeeC----cEEEEEecCCcEEEEEccCccCC
Q psy7482         242 TVCTGNEESAITAYNLTDGSH--------------LWHIKASASRIKGLASHR----NHLICITSAGDLVVWELNEDVTR  303 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~~~~~~--------------~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~v~iw~~~~~~~~  303 (327)
                      ++++++.|+.|++||+.+++.              +..+..|...|++++|+|    ++|++++.||.|++||+..+...
T Consensus       243 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~  322 (366)
T 3k26_A          243 LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH  322 (366)
T ss_dssp             EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred             EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence            999999999999999988754              788889999999999987    69999999999999999987311


Q ss_pred             Cce--eeeecCCCCceEEEEeCCCC
Q psy7482         304 EPQ--RVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       304 ~~~--~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ...  .+....+...|++++|+|+.
T Consensus       323 ~~~~~~~~~~~~~~~v~~~~~s~~~  347 (366)
T 3k26_A          323 KAKCTTLTHHKCGAAIRQTSFSRDS  347 (366)
T ss_dssp             GCEEEEECCTTCCSCEEEEEECTTS
T ss_pred             cccceEEcccccCCceEEEEeCCCC
Confidence            112  22222236899999999974

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1e-39  Score=272.29  Aligned_cols=239  Identities=12%  Similarity=0.120  Sum_probs=194.4

Q ss_pred             ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC--eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcC
Q psy7482          51 MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV  128 (327)
Q Consensus        51 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  128 (327)
                      ..+.++|++++|+|++++|++|+.|+.|++||+.++  +....+ .+|... |.+++|+|++++|++++.||.|++||+.
T Consensus         8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~h~~~-v~~~~~s~~~~~l~s~s~d~~v~vwd~~   85 (377)
T 3dwl_C            8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTF-SDHDKI-VTCVDWAPKSNRIVTCSQDRNAYVYEKR   85 (377)
T ss_dssp             EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCB-CCCSSC-EEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred             ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEE-ecCCce-EEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence            346778999999999999999999999999999988  666777 778887 9999999999999999999999999999


Q ss_pred             CCc-eeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce---eeEec--CCCceeEEEeecC-ceEE
Q psy7482         129 KGR-SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV---LQTLK--SESKVHSVCFLNE-TTVC  200 (327)
Q Consensus       129 ~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~---~~~~~--~~~~i~~~~~~~~-~~l~  200 (327)
                      +++ .........   +...+.+++|+|++++|++++ |+.|++||+++++.   ...+.  |...|.+++|+|+ .+++
T Consensus        86 ~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~  162 (377)
T 3dwl_C           86 PDGTWKQTLVLLR---LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLA  162 (377)
T ss_dssp             ---CCCCEEECCC---CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEE
T ss_pred             CCCceeeeeEecc---cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEE
Confidence            876 222222222   345699999999999999887 99999999998873   55555  7899999999999 7899


Q ss_pred             EeCCCCcEEEEEcC------------------CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         201 TGNEESAITAYNLT------------------DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       201 ~~~~d~~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      +++.|+.|++||++                  .++.+..+ .|...|.+++|+  |++++|++++.|+.|++||+.+++.
T Consensus       163 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s--p~~~~l~~~~~d~~i~iwd~~~~~~  239 (377)
T 3dwl_C          163 AGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS--PSGNALAYAGHDSSVTIAYPSAPEQ  239 (377)
T ss_dssp             EEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC--TTSSCEEEEETTTEEC-CEECSTTS
T ss_pred             EEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC--CCCCEEEEEeCCCcEEEEECCCCCC
Confidence            99999999999985                  24456666 899999999994  9999999999999999999999987


Q ss_pred             ----eEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         263 ----LWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       263 ----~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                          +..+.+|..+|.+++|+|  ++|++++.++ +.+|+..
T Consensus       240 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~~~  280 (377)
T 3dwl_C          240 PPRALITVKLSQLPLRSLLWANESAIVAAGYNYS-PILLQGN  280 (377)
T ss_dssp             CEEECCCEECSSSCEEEEEEEETTEEEEEESSSS-EEEECCC
T ss_pred             cceeeEeecCCCCceEEEEEcCCCCEEEEEcCCc-EEEEEeC
Confidence                888999999999999999  7777776555 5577765

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.8e-37  Score=259.58  Aligned_cols=245  Identities=16%  Similarity=0.257  Sum_probs=209.5

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC-CCeE
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG-SWQL   88 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~   88 (327)
                      .|...|.+++|  ++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+  +++|++++.||.|++||++ ....
T Consensus       132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~  209 (401)
T 4aez_A          132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQ  209 (401)
T ss_dssp             CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCE
T ss_pred             CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcce
Confidence            48999999999  89999999999999999999999999999999999999994  6799999999999999998 4555


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-cEEEeec---
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYAIPI---  164 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~---  164 (327)
                      ...+ ..|... |.+++|+|++++|++++.||.|++||+++++....+..     +...+.+++|+|++ .++++++   
T Consensus       210 ~~~~-~~~~~~-v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~p~~~~ll~~~~gs~  282 (401)
T 4aez_A          210 IGTL-QGHSSE-VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN-----HNAAVKAVAWCPWQSNLLATGGGTM  282 (401)
T ss_dssp             EEEE-ECCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC-----CSSCCCEEEECTTSTTEEEEECCTT
T ss_pred             eeEE-cCCCCC-eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC-----CcceEEEEEECCCCCCEEEEecCCC
Confidence            6666 778887 99999999999999999999999999998877655432     23459999999976 5666653   


Q ss_pred             CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEE--eCCCCcEEEEEcCCCceeE--EeeecccceEEEEEEecCC
Q psy7482         165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCT--GNEESAITAYNLTDGSHLW--QIKASASRIKGLVFFSIPQ  239 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~--~~~d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~s~~  239 (327)
                      |+.|++||+++++.+..+.+...+.+++|+|+ ..+++  |+.||.|++||+.+++...  .+.+|...|.+++|+  |+
T Consensus       283 d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s--~d  360 (401)
T 4aez_A          283 DKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS--PD  360 (401)
T ss_dssp             TCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC--TT
T ss_pred             CCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC--CC
Confidence            89999999999999999998899999999998 67777  6689999999999865544  467899999999995  99


Q ss_pred             CcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482         240 ETTVCTGNEESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       240 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~  267 (327)
                      +++|++++.||.|++||+.+++.+....
T Consensus       361 g~~l~s~~~dg~i~iw~~~~~~~~~~~~  388 (401)
T 4aez_A          361 GRILSTAASDENLKFWRVYDGDHVKRPI  388 (401)
T ss_dssp             SSEEEEECTTSEEEEEECCC--------
T ss_pred             CCEEEEEeCCCcEEEEECCCCccccccc
Confidence            9999999999999999999988765543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.2e-39  Score=276.31  Aligned_cols=260  Identities=12%  Similarity=0.081  Sum_probs=194.8

Q ss_pred             CCccEEEEEe--CC---------CEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482          13 HTASVRSVAA--TS---------KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF   81 (327)
Q Consensus        13 h~~~v~~~~~--~~---------~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw   81 (327)
                      +.+.|.+|+|  ++         ++||+|+.++..                       -..+|+++.|++++.|++|+||
T Consensus       132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~-----------------------~~~~~~~~~laS~s~D~tI~iW  188 (524)
T 2j04_B          132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD-----------------------EPLNEHLEMFDKEKHSSCIQIF  188 (524)
T ss_dssp             CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-----------------------------------------CEEEEEE
T ss_pred             CCCceeEEEecccCCCCccCcCCeEEEEEEecccC-----------------------CccchhhhhhccCCCCceEEEE
Confidence            5778999999  44         788888866420                       0136899999999999999999


Q ss_pred             EcCCCeEE----EeEEecccCCceeeEEEecC------CCEEEEEeCCCCEEEEEcCCCceee--eee----ccccCccc
Q psy7482          82 RVGSWQLE----KLFKKAHKGTAVNHISIHPS------GKLALSVGKDKTLRTWNLVKGRSAY--ITN----LSSYGVGF  145 (327)
Q Consensus        82 ~~~~~~~~----~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~~~--~~~----~~~~~~~~  145 (327)
                      |+.+++..    ..+ ..|.+. |.+++|+|+      +.+|++++.||+|++||+.+++...  ...    ......+.
T Consensus       189 d~~~~~~~~~~~~~l-~~~~~~-V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~  266 (524)
T 2j04_B          189 KMNTSTLHCVKVQTI-VHSFGE-VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD  266 (524)
T ss_dssp             EEETTTCCEEEEEEE-EECCCS-EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT
T ss_pred             EccCCCCCceEEEEE-EecCCc-EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC
Confidence            99876642    223 445566 999999996      5799999999999999998764321  000    00112345


Q ss_pred             cceEEEEEccCCcEEEeec-CCeEEEEEecCCc-eeeEec-CCCceeEE--EeecC--ceEEEeCCCCcEEEEEcCCCce
Q psy7482         146 ENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAG-VLQTLK-SESKVHSV--CFLNE--TTVCTGNEESAITAYNLTDGSH  218 (327)
Q Consensus       146 ~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~-~~~~~~-~~~~i~~~--~~~~~--~~l~~~~~d~~i~i~d~~~~~~  218 (327)
                      ..+.+++|+|++ .|++|+ ||+|++||+++++ +...+. |...|.++  +|+|+  .+|++++.|++|++||+++++.
T Consensus       267 ~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~  345 (524)
T 2j04_B          267 SLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT  345 (524)
T ss_dssp             TCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH
T ss_pred             CCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc
Confidence            679999999875 677776 9999999999764 444455 88999999  56776  4789999999999999999888


Q ss_pred             eEEeeeccc--ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEE
Q psy7482         219 LWQIKASAS--RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVV  294 (327)
Q Consensus       219 ~~~~~~~~~--~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~i  294 (327)
                      +..+.+|..  .+.+++|+  |+++.+++++.|+.|++||++++.++..+.+|.+.|++++|+|  ++|++|+.||+|++
T Consensus       346 ~~~~~~~~~~~~v~~v~fs--p~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~l  423 (524)
T 2j04_B          346 TKTTVSRFRGSNLVPVVYC--PQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLII  423 (524)
T ss_dssp             HCEEEEECSCCSCCCEEEE--TTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEEC
T ss_pred             ccccccccccCcccceEeC--CCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEE
Confidence            777777754  47899995  8999999999999999999999999889999999999999999  89999999999999


Q ss_pred             EEccCc
Q psy7482         295 WELNED  300 (327)
Q Consensus       295 w~~~~~  300 (327)
                      |++...
T Consensus       424 wd~~~~  429 (524)
T 2j04_B          424 TNAARR  429 (524)
T ss_dssp             CBSCSS
T ss_pred             EechHh
Confidence            997554

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=3.9e-37  Score=255.06  Aligned_cols=247  Identities=12%  Similarity=0.101  Sum_probs=198.9

Q ss_pred             EEeeeeccCCccEEEEEeCCCEEEEec-----------CCCeEEEEEcccccccc---------ccccccccEEEEEECC
Q psy7482           5 TQTFVTHSHTASVRSVAATSKLAASSG-----------ADETVVLYDMVKRKQSG---------ALMQHEGTITCLKFTP   64 (327)
Q Consensus         5 ~~~~~~~~h~~~v~~~~~~~~~l~~~~-----------~dg~v~~w~~~~~~~~~---------~~~~~~~~v~~~~~~~   64 (327)
                      ...+.+.+|...|++++++++.+++|.           .|+.+++|++.+.....         ....+...+.+++|+|
T Consensus        64 ~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp  143 (365)
T 4h5i_A           64 LSEFALEDNDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR  143 (365)
T ss_dssp             EEEEECCTTSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT
T ss_pred             eeEEEccCCCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC
Confidence            344567789999999999888887764           47789999987653221         1123455689999999


Q ss_pred             CCCeEEE--ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC
Q psy7482          65 EGSHLIS--CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG  142 (327)
Q Consensus        65 ~~~~l~~--~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  142 (327)
                      ||++|++  ++.|++|++||+++++....+  .|... |.+++|+|+++++++++. +.+.+|+..+++.........  
T Consensus       144 Dg~~la~as~~~d~~i~iwd~~~~~~~~~~--~~~~~-V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~--  217 (365)
T 4h5i_A          144 EGTVAAIASSKVPAIMRIIDPSDLTEKFEI--ETRGE-VKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIARKTDFD--  217 (365)
T ss_dssp             TSSCEEEEESCSSCEEEEEETTTTEEEEEE--ECSSC-CCEEEECTTSSEEEEECS-SCEEEEETTTCCEEEEECCCC--
T ss_pred             CCCEEEEEECCCCCEEEEeECCCCcEEEEe--CCCCc-eEEEEEccCCceEEeccc-eeEEEEEeccCcceeeeecCC--
Confidence            9999764  457899999999999988877  35555 999999999999999885 567788877777654433332  


Q ss_pred             ccccceEEEEEccCCcEEEeec-CC----eEEEEEecCCcee----eEec-CCCceeEEEeecC-ceEEEeCCCCcEEEE
Q psy7482         143 VGFENLDSVVWSPEGLLYAIPI-QN----KAVVFSVEKAGVL----QTLK-SESKVHSVCFLNE-TTVCTGNEESAITAY  211 (327)
Q Consensus       143 ~~~~~v~~~~~~~~~~~l~~~~-~~----~i~i~d~~~~~~~----~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~  211 (327)
                       +...+.+++|+|+++.+++++ ++    .++.|++......    ..+. +...|++++|+|+ .+|++|+.|+.|++|
T Consensus       218 -~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw  296 (365)
T 4h5i_A          218 -KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALV  296 (365)
T ss_dssp             -TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred             -CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence             245699999999999998886 55    6888998766532    2333 7789999999999 789999999999999


Q ss_pred             EcCCCceeEEe-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482         212 NLTDGSHLWQI-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       212 d~~~~~~~~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                      |+++++++.++ .+|..+|++++|  +|+|++|++|+.|++|+|||+...
T Consensus       297 d~~~~~~~~~~~~gH~~~V~~v~f--Spdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          297 KLKDLSMSKIFKQAHSFAITEVTI--SPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             ETTTTEEEEEETTSSSSCEEEEEE--CTTSCEEEEEETTSEEEEEECCTT
T ss_pred             ECCCCcEEEEecCcccCCEEEEEE--CCCCCEEEEEeCCCeEEEEEcCCC
Confidence            99999998885 789999999999  599999999999999999999653

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=7.5e-38  Score=257.55  Aligned_cols=259  Identities=11%  Similarity=0.052  Sum_probs=216.9

Q ss_pred             ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe---EEEeEEecccCCceeeEEEecCCC-EEEEEeCCCCEEE
Q psy7482          49 ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ---LEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRT  124 (327)
Q Consensus        49 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i  124 (327)
                      ...+|.+.|++++|+|++++|++++.|+.|++|++.+++   ....+ ..|... |.+++|+|+++ +|++++.||.|++
T Consensus         6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~l~~~~~dg~i~~   83 (342)
T 1yfq_A            6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS-LRYKHP-LLCCNFIDNTDLQIYVGTVQGEILK   83 (342)
T ss_dssp             CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEE-EECSSC-EEEEEEEESSSEEEEEEETTSCEEE
T ss_pred             cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceee-eecCCc-eEEEEECCCCCcEEEEEcCCCeEEE
Confidence            345799999999999999999999999999999998776   23344 567776 99999999999 9999999999999


Q ss_pred             EEc-CCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecC---------CceeeEecCCCceeEEEe
Q psy7482         125 WNL-VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEK---------AGVLQTLKSESKVHSVCF  193 (327)
Q Consensus       125 wd~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~---------~~~~~~~~~~~~i~~~~~  193 (327)
                      ||+ .+++.. .  +.. ..+...|.+++|+| +.++++++ |+.|++||+++         ++.+..+.+...+.+++|
T Consensus        84 wd~~~~~~~~-~--~~~-~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  158 (342)
T 1yfq_A           84 VDLIGSPSFQ-A--LTN-NEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT  158 (342)
T ss_dssp             ECSSSSSSEE-E--CBS-CCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred             EEeccCCceE-e--ccc-cCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence            999 877552 2  221 01345699999999 88888887 99999999998         777777778999999999


Q ss_pred             ecCceEEEeCCCCcEEEEEcCC-Cce--eEEeeecccceEEEEEEecC-CCcEEEEecCCCeEEEEEcCCC------cee
Q psy7482         194 LNETTVCTGNEESAITAYNLTD-GSH--LWQIKASASRIKGLVFFSIP-QETTVCTGNEESAITAYNLTDG------SHL  263 (327)
Q Consensus       194 ~~~~~l~~~~~d~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~------~~~  263 (327)
                      +|+. +++++.++.|++||+++ +..  ......|...+.+++|+  | +++++++++.||.|++|+++..      +..
T Consensus       159 ~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~--~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~  235 (342)
T 1yfq_A          159 NSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL--PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR  235 (342)
T ss_dssp             CSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC--SGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred             cCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC--CCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence            9987 99999999999999988 543  33445678899999995  8 9999999999999999999887      788


Q ss_pred             EEeecccC---------ceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCC-CCceEEEE
Q psy7482         264 WHIKASAS---------RIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATND-GCRFTCLA  321 (327)
Q Consensus       264 ~~~~~~~~---------~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~i~~l~  321 (327)
                      ..+..|..         .|.+++|+|  ++|++++.||.|++||+..+.   . ......+ ..+|++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~-~~~~~~~h~~~v~~~~  301 (342)
T 1yfq_A          236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK---K-IKNFAKFNEDSVVKIA  301 (342)
T ss_dssp             EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---E-EEECCCCSSSEEEEEE
T ss_pred             eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh---H-hhhhhcccCCCceEec
Confidence            88888865         999999999  899999999999999998872   2 1122334 78899988

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.6e-37  Score=261.13  Aligned_cols=279  Identities=13%  Similarity=0.110  Sum_probs=225.8

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccc---ccccccc-------------------------------------
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRK---QSGALMQ-------------------------------------   52 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~---~~~~~~~-------------------------------------   52 (327)
                      .++.+++|  +|++|+++ .++.|++||+.+++   .+..+..                                     
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS   83 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence            46778888  88876665 47899999999888   5444432                                     


Q ss_pred             -----------------ccccEEEEEECCCCCeE-EEecCCCcEEEEEcC--CCeEEEeEEe-cccCCceeeEEEecCCC
Q psy7482          53 -----------------HEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVG--SWQLEKLFKK-AHKGTAVNHISIHPSGK  111 (327)
Q Consensus        53 -----------------~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~--~~~~~~~~~~-~~~~~~v~~~~~~~~~~  111 (327)
                                       |.+.|++++|+|++++| ++++.||.|++||+.  +++....+.. .+... |.+++|+|+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-v~~~~~sp~~~  162 (450)
T 2vdu_B           84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKR-PNAISIAEDDT  162 (450)
T ss_dssp             ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSC-EEEEEECTTSS
T ss_pred             ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCC-ceEEEEcCCCC
Confidence                             33479999999999996 899999999999999  8888877732 34455 99999999999


Q ss_pred             EEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC---CcEEEeec-CCeEEEEEecCCceeeEec--CC
Q psy7482         112 LALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE---GLLYAIPI-QNKAVVFSVEKAGVLQTLK--SE  185 (327)
Q Consensus       112 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~  185 (327)
                      +|++++.+|.+++|++.+++.... .......+...|.+++|+|+   +++|++++ |+.|++||+++++.+..+.  |.
T Consensus       163 ~l~~~~~~g~v~~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~  241 (450)
T 2vdu_B          163 TVIIADKFGDVYSIDINSIPEEKF-TQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK  241 (450)
T ss_dssp             EEEEEETTSEEEEEETTSCCCSSC-CCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred             EEEEEeCCCcEEEEecCCcccccc-cceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence            999999999999999988765420 00111223456999999999   98998887 9999999999998887743  88


Q ss_pred             CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeec-------------------------ccceEEEEEEecCC
Q psy7482         186 SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKAS-------------------------ASRIKGLVFFSIPQ  239 (327)
Q Consensus       186 ~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------------------~~~v~~~~~~~s~~  239 (327)
                      ..|.+++|+ + .+|++++.|+.|++||+++++.+..+..+                         ...+..++|.  |+
T Consensus       242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~--~~  318 (450)
T 2vdu_B          242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS--KN  318 (450)
T ss_dssp             SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC--SS
T ss_pred             CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe--CC
Confidence            999999999 8 89999999999999999999988877633                         3468889985  89


Q ss_pred             CcEEEEec-CCCeEEEEEc--CCC---ceeEEeecccCceEEEeeeC-cEEEEEec-------CCcEEEEEccCc
Q psy7482         240 ETTVCTGN-EESAITAYNL--TDG---SHLWHIKASASRIKGLASHR-NHLICITS-------AGDLVVWELNED  300 (327)
Q Consensus       240 ~~~l~~~~-~d~~i~i~d~--~~~---~~~~~~~~~~~~v~~~~~~~-~~l~~~~~-------dg~v~iw~~~~~  300 (327)
                      +++|++++ .|+.|++|++  .++   +.+..+..| ..|.+++|+| .++++.+.       +..|.+|.+...
T Consensus       319 ~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~  392 (450)
T 2vdu_B          319 LPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN  392 (450)
T ss_dssp             SSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred             CCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence            99999988 8999999999  565   677778888 7999999999 55555543       455899988654

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=7.3e-37  Score=253.90  Aligned_cols=276  Identities=16%  Similarity=0.241  Sum_probs=223.5

Q ss_pred             EEEccccccccccccccccEEEEEECCC---CCeEEEecCCCcEEEEEcCC-CeEE-EeEEecccCCceeeEEEecCCCE
Q psy7482          38 LYDMVKRKQSGALMQHEGTITCLKFTPE---GSHLISCSDDGSIAIFRVGS-WQLE-KLFKKAHKGTAVNHISIHPSGKL  112 (327)
Q Consensus        38 ~w~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iw~~~~-~~~~-~~~~~~~~~~~v~~~~~~~~~~~  112 (327)
                      .|+....+.+..+.+|.+.|++++|+|+   |++|++|+.||.|++||+.+ ++.. ..+ ..|... |.+++|+|++++
T Consensus        23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~  100 (368)
T 3mmy_A           23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQ-QMHTGP-VLDVCWSDDGSK  100 (368)
T ss_dssp             CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEE-EECSSC-EEEEEECTTSSE
T ss_pred             cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEe-ccccCC-EEEEEECcCCCE
Confidence            3455566777788899999999999998   59999999999999999987 5555 455 778877 999999999999


Q ss_pred             EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE--ccCCcEEEeec-CCeEEEEEecCCceeeEecCCCcee
Q psy7482         113 ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW--SPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVH  189 (327)
Q Consensus       113 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~  189 (327)
                      |++++.||.|++||+++++......      +...+.+++|  +|++.++++++ |+.|++||+++++.+..+.....+.
T Consensus       101 l~s~~~dg~v~iwd~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~  174 (368)
T 3mmy_A          101 VFTASCDKTAKMWDLSSNQAIQIAQ------HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCY  174 (368)
T ss_dssp             EEEEETTSEEEEEETTTTEEEEEEE------CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEE
T ss_pred             EEEEcCCCcEEEEEcCCCCceeecc------ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCce
Confidence            9999999999999999888765433      2345999999  89999888887 9999999999999999998777888


Q ss_pred             EEEeecCceEEEeCCCCcEEEEEcCCCceeEEe--eecccceEEEEEEecCC--CcEEEEecCCCeEEEEEcCCC---ce
Q psy7482         190 SVCFLNETTVCTGNEESAITAYNLTDGSHLWQI--KASASRIKGLVFFSIPQ--ETTVCTGNEESAITAYNLTDG---SH  262 (327)
Q Consensus       190 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~---~~  262 (327)
                      ++.+.++ .+++++.++.+.+|+++........  ..+......+.+.+.+.  ...+++++.|+.|++||+...   ..
T Consensus       175 ~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~  253 (368)
T 3mmy_A          175 CADVIYP-MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD  253 (368)
T ss_dssp             EEEEETT-EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred             EEEecCC-eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence            8887764 6777888999999999876543322  22334556666653222  233999999999999999987   56


Q ss_pred             eEEeecccC------------ceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         263 LWHIKASAS------------RIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       263 ~~~~~~~~~------------~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +..+..|..            +|++++|+|  ++|++++.||.|++||+..+.  .  ......+..+|++++|+|+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~--~--~~~~~~~~~~v~~~~~s~~g  327 (368)
T 3mmy_A          254 NFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART--K--LKTSEQLDQPISACCFNHNG  327 (368)
T ss_dssp             SEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE--E--EEECCCCSSCEEEEEECTTS
T ss_pred             ceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc--E--EEEecCCCCCceEEEECCCC
Confidence            778888876            799999999  799999999999999999872  1  12223567889999999974

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=9.7e-38  Score=262.82  Aligned_cols=281  Identities=16%  Similarity=0.255  Sum_probs=229.8

Q ss_pred             CCeEEEEEccccccccccccccccEEEEEECC-CCCeEEEecCCCcEEEEEcCCCeEEEeEE------------ecccCC
Q psy7482          33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFK------------KAHKGT   99 (327)
Q Consensus        33 dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------------~~~~~~   99 (327)
                      ++.+++|++..++....+.+|.+.|++++|+| ++++|++|+.||.|++||+.+++....+.            .+|...
T Consensus        22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (408)
T 4a11_B           22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS  101 (408)
T ss_dssp             HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred             cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence            45688899988888888999999999999999 99999999999999999998876655542            136666


Q ss_pred             ceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC---cEEEeec-CCeEEEEEec
Q psy7482         100 AVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG---LLYAIPI-QNKAVVFSVE  174 (327)
Q Consensus       100 ~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~-~~~i~i~d~~  174 (327)
                       |.+++|+| ++.+|++++.||.|++||+++++....+.....      +.++.++|.+   .++++++ ++.|++||++
T Consensus       102 -v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~  174 (408)
T 4a11_B          102 -VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEET------VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK  174 (408)
T ss_dssp             -EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSC------EEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred             -EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCc------eeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence             99999999 778999999999999999999988777765444      8899999854   4788876 9999999999


Q ss_pred             CCceeeEec-CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCc-eeEEe---------------eecccceEEEEEE
Q psy7482         175 KAGVLQTLK-SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGS-HLWQI---------------KASASRIKGLVFF  235 (327)
Q Consensus       175 ~~~~~~~~~-~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~-~~~~~---------------~~~~~~v~~~~~~  235 (327)
                      +++.+..+. |...|.+++|+|+ . ++++++.||.|++||++++. .+..+               ..|...|.+++|+
T Consensus       175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  254 (408)
T 4a11_B          175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT  254 (408)
T ss_dssp             SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred             CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence            999888888 8899999999998 4 58899999999999998765 33333               5788899999995


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc------CceEEEeeeC-cEEEEEecCCcEEEEEccCccCCCceee
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA------SRIKGLASHR-NHLICITSAGDLVVWELNEDVTREPQRV  308 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~  308 (327)
                        |++++|++++.|+.|++||+.+++....+..+.      .......... ..+++++.|+.|++||+..+.   + ..
T Consensus       255 --~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~-~~  328 (408)
T 4a11_B          255 --SDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE---Q-IT  328 (408)
T ss_dssp             --TTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC---E-EE
T ss_pred             --CCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc---c-ee
Confidence              899999999999999999999988665544331      1111222222 778888899999999998872   2 12


Q ss_pred             eecCCCCceEEEEeCCCC
Q psy7482         309 SATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       309 ~~~~~~~~i~~l~~~p~~  326 (327)
                      ....|...|++++|+|+.
T Consensus       329 ~~~~~~~~v~~~~~s~~~  346 (408)
T 4a11_B          329 MLKGHYKTVDCCVFQSNF  346 (408)
T ss_dssp             EECCCSSCEEEEEEETTT
T ss_pred             eeccCCCeEEEEEEcCCC
Confidence            223477889999999974

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-38  Score=266.45  Aligned_cols=262  Identities=11%  Similarity=0.069  Sum_probs=209.7

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      +.-...|.+++|  ||+++|+++.|++|+  |...+   ..+.+|...|.+++|+|+|       .++.+.+|+.+   .
T Consensus        12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~---~   76 (588)
T 2j04_A           12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQ---Q   76 (588)
T ss_dssp             CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC---S
T ss_pred             hHhhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCC---C
Confidence            356688999999  999999999999999  64444   4557999999999999998       46565555543   2


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCe
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNK  167 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~  167 (327)
                      ...+...+... |.+++|+|+|+.|++++.||.|++||.+.  ....+. +........+.+++|+|+|++|++|+ ||+
T Consensus        77 ~~~~~~~~~~~-V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGt  152 (588)
T 2j04_A           77 NGLLNSQPVCY-PRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGE  152 (588)
T ss_dssp             SCSSTTSCSCC-EEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSE
T ss_pred             ceEeecCCCCc-EEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCE
Confidence            22332245455 99999999999999999999999999543  333322 22111123599999999999999998 999


Q ss_pred             EEEEEecCCce-------eeEec-----CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCce---eEEe-eecccceEE
Q psy7482         168 AVVFSVEKAGV-------LQTLK-----SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSH---LWQI-KASASRIKG  231 (327)
Q Consensus       168 i~i~d~~~~~~-------~~~~~-----~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~-~~~~~~v~~  231 (327)
                      |++||+.+++.       +..+.     |...|.+++|+|++ +++++.|+.|++||+..++.   ..++ .+|...|.+
T Consensus       153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s  231 (588)
T 2j04_A          153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD  231 (588)
T ss_dssp             EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred             EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence            99999998753       45652     56799999999999 99999999999999988773   3456 478889999


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee--eC--cEEEEEecCCcEEEEEcc
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS--HR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      ++|+    |+.||+++ ++.|++||+.+++......+|.+.+.+++|  +|  ..++++++||+ ++|..+
T Consensus       232 vaFs----g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d  296 (588)
T 2j04_A          232 LKIV----DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED  296 (588)
T ss_dssp             EEEE----TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred             EEEE----CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence            9993    68899887 699999999988874444489999999999  88  68999999999 999873

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=1.9e-36  Score=246.63  Aligned_cols=253  Identities=17%  Similarity=0.251  Sum_probs=213.7

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      ++.+.+.+++|...|++++|  ++++||+|+.||+|++||+.+++.+..+.+|...+.++.+.  +..+++++.++.+++
T Consensus        56 ~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~--~~~l~s~~~~~~~~~  133 (318)
T 4ggc_A           56 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHH  133 (318)
T ss_dssp             CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEE--TTEEEEEETTSEEEE
T ss_pred             CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecC--CCEEEEEecCCceEe
Confidence            45677888899999999999  89999999999999999999999999999999988876654  679999999999999


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE-
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL-  159 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-  159 (327)
                      |+............+|... +..+.+.++++++++++.||.|++||+++++....... ....+...+.++.++|++.. 
T Consensus       134 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~  211 (318)
T 4ggc_A          134 HDVRVAEHHVATLSGHSQE-VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ-TFTQHQGAVKAVAWCPWQSNV  211 (318)
T ss_dssp             EETTSSSCEEEEEECCSSC-EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSE-EECCCCSCEEEEEECTTSTTE
T ss_pred             eecCCCceeEEEEcCccCc-eEEEEEcCCCCEEEEEecCcceeEEECCCCccccccee-eecccCCceEEEEecCCCCcE
Confidence            9998765443332778877 99999999999999999999999999988764332211 11223445999999997653 


Q ss_pred             E--Eeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEE--eCCCCcEEEEEcCCCceeEEeeecccceEEEE
Q psy7482         160 Y--AIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCT--GNEESAITAYNLTDGSHLWQIKASASRIKGLV  233 (327)
Q Consensus       160 l--~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~  233 (327)
                      +  ++++ ++.|++||.+.........+...+..+.|+|+ +.+++  |+.|+.|++||+++++++.++.+|.++|++++
T Consensus       212 ~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~  291 (318)
T 4ggc_A          212 LATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLT  291 (318)
T ss_dssp             EEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred             EEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence            3  2334 78999999999998888888999999999998 55554  45899999999999999999999999999999


Q ss_pred             EEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         234 FFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      |+  |++++|++|+.||+|++||+.+..
T Consensus       292 ~s--pdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          292 MS--PDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             EC--TTSSCEEEEETTTEEEEECCSCCC
T ss_pred             Ec--CCCCEEEEEecCCeEEEEECCCCC
Confidence            95  999999999999999999987654

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=4.1e-36  Score=255.12  Aligned_cols=273  Identities=12%  Similarity=0.108  Sum_probs=231.1

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEcccccccc-----ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-----ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      ..+.+++|  ++.++++++.++.|++||+.+++...     .+.+|...|.+++|+|+++++++++.|+.|++||+++++
T Consensus       123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~  202 (433)
T 3bws_A          123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA  202 (433)
T ss_dssp             SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred             CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence            34557888  67788888889999999999988776     556789999999999999999999999999999999999


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEe-CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--  164 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--  164 (327)
                      ....+ ..+... +.+++|+|+++.+++++ .|+.|++||+++++....+....      .+.+++|+|+++.++++.  
T Consensus       203 ~~~~~-~~~~~~-~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~~  274 (433)
T 3bws_A          203 YKATV-DLTGKW-SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG------LPRGLLLSKDGKELYIAQFS  274 (433)
T ss_dssp             EEEEE-ECSSSS-EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS------EEEEEEECTTSSEEEEEEEE
T ss_pred             EEEEE-cCCCCC-eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC------CceEEEEcCCCCEEEEEECC
Confidence            88888 666666 99999999999886554 79999999999887765554432      289999999998887765  


Q ss_pred             -------CCeEEEEEecCCceeeEecCCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         165 -------QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       165 -------~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                             |+.|++||+++++....+.+...+.+++|+|+ + .+++++.++.|++||+.+++.+..+. +...+.+++|+
T Consensus       275 ~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s  353 (433)
T 3bws_A          275 ASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALS  353 (433)
T ss_dssp             SCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEEC
T ss_pred             CCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEc
Confidence                   67999999999998888877778999999998 3 45677999999999999988887776 66778999994


Q ss_pred             ecCCCcEEEEecC---------------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEec-CCcEEEEEc
Q psy7482         236 SIPQETTVCTGNE---------------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITS-AGDLVVWEL  297 (327)
Q Consensus       236 ~s~~~~~l~~~~~---------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-dg~v~iw~~  297 (327)
                        |+++++++++.               ||.|++||+.+++.+..+..+ ..+.+++|+|  ++|++++. |+.|++|++
T Consensus       354 --~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~  430 (433)
T 3bws_A          354 --PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYRR  430 (433)
T ss_dssp             --TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred             --CCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence              89998888766               579999999999988888764 4789999999  77777764 999999998


Q ss_pred             cC
Q psy7482         298 NE  299 (327)
Q Consensus       298 ~~  299 (327)
                      +.
T Consensus       431 ~~  432 (433)
T 3bws_A          431 DG  432 (433)
T ss_dssp             TT
T ss_pred             cC
Confidence            63

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=1.3e-36  Score=251.14  Aligned_cols=246  Identities=15%  Similarity=0.155  Sum_probs=191.8

Q ss_pred             EEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEE-EEE
Q psy7482          38 LYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA-LSV  116 (327)
Q Consensus        38 ~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~  116 (327)
                      ||++.+.+++..+..|...|++++|+|+|++|++|+.++ +++|++.+++.....   +... +..+++.++++.+ +++
T Consensus         3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~   77 (355)
T 3vu4_A            3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ---EMRH-LSKVRMLHRTNYVAFVT   77 (355)
T ss_dssp             ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE---ECSC-CCEEEECTTSSEEEEEC
T ss_pred             cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee---ecCC-eEEEEEcCCCCEEEEEE
Confidence            566777777778889999999999999999999998775 789999887665543   2224 7888899988877 557


Q ss_pred             eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCC-ceeeEecCCCceeEEEeec
Q psy7482         117 GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKA-GVLQTLKSESKVHSVCFLN  195 (327)
Q Consensus       117 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~  195 (327)
                      +.|+.|++||+.+++.+..+....      .+.++.++++.  ++++.++.|++||+.++ +.+..+..  +...+++++
T Consensus        78 ~~d~~v~iWd~~~~~~~~~~~~~~------~v~~v~~~~~~--~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~  147 (355)
T 3vu4_A           78 GVKEVVHIWDDVKKQDVSRIKVDA------PVKDLFLSREF--IVVSYGDVISVFKFGNPWKRITDDIR--FGGVCEFSN  147 (355)
T ss_dssp             SSTTEEEEEETTTTEEEEEEECSS------CEEEEEECSSE--EEEEETTEEEEEESSTTCCBSSCCEE--EEEEEEEET
T ss_pred             CCccEEEEEECCCCcEEEEEECCC------ceEEEEEcCCE--EEEEEcCEEEEEECCCCceeeEEecc--CCceEEEEc
Confidence            778999999999998877765443      39999998764  55567899999999988 66666555  455566777


Q ss_pred             CceEEE--eCCCCcEEEEEcCCCc---------------e-eEEeeecccceEEEEEEecCCCcEEEEecCCCe-EEEEE
Q psy7482         196 ETTVCT--GNEESAITAYNLTDGS---------------H-LWQIKASASRIKGLVFFSIPQETTVCTGNEESA-ITAYN  256 (327)
Q Consensus       196 ~~~l~~--~~~d~~i~i~d~~~~~---------------~-~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~-i~i~d  256 (327)
                       .++++  |+.+|.|++||+++++               + +..+.+|..+|.+++|+  |++++|++|+.|++ |++||
T Consensus       148 -~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s--~~g~~l~s~s~d~~~v~iwd  224 (355)
T 3vu4_A          148 -GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN--RKSDMVATCSQDGTIIRVFK  224 (355)
T ss_dssp             -TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC--TTSSEEEEEETTCSEEEEEE
T ss_pred             -cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC--CCCCEEEEEeCCCCEEEEEE
Confidence             55555  7899999999998865               2 67889999999999995  99999999999998 99999


Q ss_pred             cCCCceeEEee-c-ccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482         257 LTDGSHLWHIK-A-SASRIKGLASHR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       257 ~~~~~~~~~~~-~-~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      +++++++..+. + |...|++++|+|  ++|++++.|+.|++||+....
T Consensus       225 ~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~  273 (355)
T 3vu4_A          225 TEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ  273 (355)
T ss_dssp             TTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred             CCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence            99999999998 5 999999999999  899999999999999998763

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-37  Score=254.83  Aligned_cols=261  Identities=10%  Similarity=0.104  Sum_probs=209.4

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC---------CCeEEEeEE
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG---------SWQLEKLFK   93 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~---------~~~~~~~~~   93 (327)
                      ++++|++|+.||+|++||+.+++.+..+.  ...|.++.|+|+   +++++.|++|++|+..         +++.+..+.
T Consensus        47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~  121 (343)
T 3lrv_A           47 DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE  121 (343)
T ss_dssp             EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred             CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee
Confidence            78899999999999999999998887776  567888889987   9999999999999665         555555554


Q ss_pred             ecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEE
Q psy7482          94 KAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVV  170 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i  170 (327)
                      ..|... |.+++|+|  +++++++++.||.|++||+++++........    +...+.+++|+|++.++++|+ |+.|++
T Consensus       122 ~~~~~~-v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~----~~~~i~~~~~~pdg~~lasg~~dg~i~i  196 (343)
T 3lrv_A          122 VDSANE-IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK----SDVEYSSGVLHKDSLLLALYSPDGILDV  196 (343)
T ss_dssp             CCCSSC-EEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC----SSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred             cCCCCC-EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC----CCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence            466566 99999999  9999999999999999999998875443222    123499999999999999987 999999


Q ss_pred             EEecCCcee-eEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeee---cccceE--EEEEEecCCCc
Q psy7482         171 FSVEKAGVL-QTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKA---SASRIK--GLVFFSIPQET  241 (327)
Q Consensus       171 ~d~~~~~~~-~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~--~~~~~~s~~~~  241 (327)
                      ||+++++.. ..+.  |..+|.+++|+|+ .+|++++ ++.|++||+++++.+..+..   |...+.  +++|  +|+++
T Consensus       197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~  273 (343)
T 3lrv_A          197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI--DDSGK  273 (343)
T ss_dssp             EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE--CTTSS
T ss_pred             EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEE--CCCCC
Confidence            999999877 5665  6899999999999 6788888 55999999999877655543   444444  5888  49999


Q ss_pred             EEEEecC-CCeEEEEEcCCCceeEEeecccCceEEEeeeC-----cEEEEEecCCcEEEEEccCc
Q psy7482         242 TVCTGNE-ESAITAYNLTDGSHLWHIKASASRIKGLASHR-----NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       242 ~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +|++++. |+.+++|++.........    .++..+.|.+     ..+++++.||.+.++-....
T Consensus       274 ~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~  334 (343)
T 3lrv_A          274 NMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND  334 (343)
T ss_dssp             EEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred             EEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence            9999888 999999999776654444    4677888886     78999999999998865544

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=3.8e-35  Score=245.90  Aligned_cols=263  Identities=12%  Similarity=0.173  Sum_probs=223.2

Q ss_pred             CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecccCCcee
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN  102 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~  102 (327)
                      +.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.+++....+ ..+. . +.
T Consensus         2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~-~~~~-~-v~   77 (391)
T 1l0q_A            2 TFAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV-PAGS-S-PQ   77 (391)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE-ECSS-S-EE
T ss_pred             CEEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE-ECCC-C-cc
Confidence            3468899999999999999999988888665 48999999999977 67778999999999999998887 4333 4 99


Q ss_pred             eEEEecCCCEEEEEe-CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE-Eeec-CCeEEEEEecCCcee
Q psy7482         103 HISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY-AIPI-QNKAVVFSVEKAGVL  179 (327)
Q Consensus       103 ~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~-~~~i~i~d~~~~~~~  179 (327)
                      +++|+|++++|++++ .++.|++||+.+++..........      +.+++|+|+++.+ +++. ++.|++||+.+++.+
T Consensus        78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~  151 (391)
T 1l0q_A           78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS------PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI  151 (391)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCC------cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence            999999999876554 679999999999888766654433      8999999999876 5555 899999999999999


Q ss_pred             eEecCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec---CCCeEEE
Q psy7482         180 QTLKSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN---EESAITA  254 (327)
Q Consensus       180 ~~~~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~---~d~~i~i  254 (327)
                      ..+.....+.+++|+|+ +.+ ++++.++.|++||+++++.+..+. +...+.+++|+  |+++++++++   .++.|++
T Consensus       152 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~--~~g~~l~~~~~~~~~~~v~~  228 (391)
T 1l0q_A          152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVN--PEGTKAYVTNVDKYFNTVSM  228 (391)
T ss_dssp             EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEEC--TTSSEEEEEEECSSCCEEEE
T ss_pred             EEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEEC--CCCCEEEEEecCcCCCcEEE
Confidence            88887778899999998 555 677889999999999998877765 45578899994  8999998887   6899999


Q ss_pred             EEcCCCceeEEeecccCceEEEeeeC--cEE-EEEecCCcEEEEEccCc
Q psy7482         255 YNLTDGSHLWHIKASASRIKGLASHR--NHL-ICITSAGDLVVWELNED  300 (327)
Q Consensus       255 ~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~~dg~v~iw~~~~~  300 (327)
                      ||+.+++.+..+..|. .+.+++|+|  ++| ++++.|+.|++||+.++
T Consensus       229 ~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~  276 (391)
T 1l0q_A          229 IDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN  276 (391)
T ss_dssp             EETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred             EECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence            9999999988888776 578999999  555 67788999999999876

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=9.4e-36  Score=252.97  Aligned_cols=257  Identities=14%  Similarity=0.287  Sum_probs=218.7

Q ss_pred             cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc
Q psy7482          52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR  131 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  131 (327)
                      +|...|.++.+  ++++|++|+.||.|++||+.+++....+ .+|... |.+++|  ++++|++|+.||.|++||+++++
T Consensus       131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~h~~~-v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~  204 (435)
T 1p22_A          131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL-TGHTGS-VLCLQY--DERVIITGSSDSTVRVWDVNTGE  204 (435)
T ss_dssp             SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEE-CCCSSC-EEEEEC--CSSEEEEEETTSCEEEEESSSCC
T ss_pred             CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEE-cCCCCc-EEEEEE--CCCEEEEEcCCCeEEEEECCCCc
Confidence            46677998887  6899999999999999999999999888 788887 999998  68899999999999999999998


Q ss_pred             eeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCcee---eEec-CCCceeEEEeecCceEEEeCCCC
Q psy7482         132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVL---QTLK-SESKVHSVCFLNETTVCTGNEES  206 (327)
Q Consensus       132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~---~~~~-~~~~i~~~~~~~~~~l~~~~~d~  206 (327)
                      ....+..     +...+.+++|++  ..+++++ |+.|++||+++++..   ..+. |...|.++++ ..+++++|+.||
T Consensus       205 ~~~~~~~-----h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg  276 (435)
T 1p22_A          205 MLNTLIH-----HCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDR  276 (435)
T ss_dssp             EEEEECC-----CCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETTS
T ss_pred             EEEEEcC-----CCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCCC
Confidence            7665543     244599999974  4677766 999999999988765   3343 7889999999 347999999999


Q ss_pred             cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEE
Q psy7482         207 AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICI  286 (327)
Q Consensus       207 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~  286 (327)
                      .|++||+++++.+..+.+|...+.++.+    ++.++++|+.||.|++||+++++++..+.+|...|.+++|++.+|++|
T Consensus       277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg  352 (435)
T 1p22_A          277 TIKVWNTSTCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSG  352 (435)
T ss_dssp             EEEEEETTTCCEEEEEECCSSCEEEEEE----ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEE
T ss_pred             eEEEEECCcCcEEEEEcCCCCcEEEEEe----CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEE
Confidence            9999999999999999999999999987    468999999999999999999999999999999999999988999999


Q ss_pred             ecCCcEEEEEccCccCCC-----ceeeeecCCCCceEEEEeCCCC
Q psy7482         287 TSAGDLVVWELNEDVTRE-----PQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       287 ~~dg~v~iw~~~~~~~~~-----~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +.||.|++||+.......     ........|...|++++|.+..
T Consensus       353 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~  397 (435)
T 1p22_A          353 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ  397 (435)
T ss_dssp             ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSC
T ss_pred             eCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCE
Confidence            999999999997763110     0222334577889999996653

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4e-37  Score=277.56  Aligned_cols=243  Identities=15%  Similarity=0.247  Sum_probs=206.3

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEcc--ccccccccccccccEEEEEECCC--CCeEEEecCCCcEEEEEc
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIFRV   83 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iw~~   83 (327)
                      +.+|.+.|++++|  ++++|++|+.||.|++||+.  +++....+.+|.++|++++|+|+  +++|++|+.||.|++||+
T Consensus         5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~   84 (753)
T 3jro_A            5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE   84 (753)
T ss_dssp             ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred             cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence            4599999999999  89999999999999999998  66778889999999999999988  999999999999999999


Q ss_pred             CCCe--EEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc----
Q psy7482          84 GSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP----  155 (327)
Q Consensus        84 ~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----  155 (327)
                      .+++  ....+ ..|... |.+++|+|+  ++.+++++.||.|++||++++..........   +...+.+++|+|    
T Consensus        85 ~~~~~~~~~~~-~~h~~~-V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~---~~~~v~~l~~~p~~~~  159 (753)
T 3jro_A           85 ENGRWSQIAVH-AVHSAS-VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA---HAIGVNSASWAPATIE  159 (753)
T ss_dssp             ETTEEEEEEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC---CSSCEEEEEECCCC--
T ss_pred             CCCcccccccc-cCCCCC-eEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec---CCCceEEEEecCcccc
Confidence            9887  45555 667777 999999998  9999999999999999998875444333332   245599999999    


Q ss_pred             ---------CCcEEEeec-CCeEEEEEecCC----ceeeEec-CCCceeEEEeecC----ceEEEeCCCCcEEEEEcCCC
Q psy7482         156 ---------EGLLYAIPI-QNKAVVFSVEKA----GVLQTLK-SESKVHSVCFLNE----TTVCTGNEESAITAYNLTDG  216 (327)
Q Consensus       156 ---------~~~~l~~~~-~~~i~i~d~~~~----~~~~~~~-~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~  216 (327)
                               ++.++++++ ||.|++||++++    .....+. |...|.+++|+|+    .++++++.||.|++||++++
T Consensus       160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~  239 (753)
T 3jro_A          160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE  239 (753)
T ss_dssp             -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred             cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence                     478888887 999999999887    3444555 7899999999998    47889999999999999886


Q ss_pred             c-----eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         217 S-----HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       217 ~-----~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      +     .+.....|...+++++|+  |+++++++++.||.|++|++..
T Consensus       240 ~~~~~~~~~~~~~~~~~v~~l~~s--pdg~~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          240 QGPWKKTLLKEEKFPDVLWRASWS--LSGNVLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             SSCCBCCBSSSSCCSSCCCCEEEC--TTTCCEEEECSSSCEECCBCCS
T ss_pred             CCcceeEEeccCCCCCceEEEEEc--CCCCEEEEEcCCCEEEEEecCC
Confidence            4     333445688899999995  9999999999999999999875

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=1.8e-36  Score=256.82  Aligned_cols=248  Identities=14%  Similarity=0.307  Sum_probs=208.5

Q ss_pred             ccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCC----------CeEEEeEEecccCCceeeEEEecCCC-EEEEE
Q psy7482          49 ALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGS----------WQLEKLFKKAHKGTAVNHISIHPSGK-LALSV  116 (327)
Q Consensus        49 ~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~  116 (327)
                      ....|.+.|++++|+|+ +.+|++++.||.|++|++.+          .+....+ .+|... |.+++|+|++. +|+++
T Consensus       123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~l~~~~~~~~~l~s~  200 (430)
T 2xyi_A          123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL-RGHQKE-GYGLSWNPNLNGYLLSA  200 (430)
T ss_dssp             EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE-ECCSSC-CCCEEECTTSTTEEEEE
T ss_pred             EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe-cCCCCC-eEEEEeCCCCCCeEEEE
Confidence            34569999999999997 67999999999999999976          5666677 778777 99999999888 99999


Q ss_pred             eCCCCEEEEEcCCCceee-e-eeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCC---ceeeEec-CCCce
Q psy7482         117 GKDKTLRTWNLVKGRSAY-I-TNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKA---GVLQTLK-SESKV  188 (327)
Q Consensus       117 ~~dg~i~iwd~~~~~~~~-~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~---~~~~~~~-~~~~i  188 (327)
                      +.||.|++||+.++.... . ........+...|.+++|+| ++.++++++ ++.|++||++++   +.+..+. |...|
T Consensus       201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v  280 (430)
T 2xyi_A          201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV  280 (430)
T ss_dssp             CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred             eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence            999999999998743211 1 01111123455699999999 667888876 999999999987   4666664 88999


Q ss_pred             eEEEeecC-c-eEEEeCCCCcEEEEEcCC-CceeEEeeecccceEEEEEEecCCC-cEEEEecCCCeEEEEEcCC-----
Q psy7482         189 HSVCFLNE-T-TVCTGNEESAITAYNLTD-GSHLWQIKASASRIKGLVFFSIPQE-TTVCTGNEESAITAYNLTD-----  259 (327)
Q Consensus       189 ~~~~~~~~-~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~s~~~-~~l~~~~~d~~i~i~d~~~-----  259 (327)
                      .+++|+|+ . ++++|+.||.|++||+++ .+++..+..|...|.+++|+  |++ .+|++++.|+.|++||+..     
T Consensus       281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s--p~~~~~l~s~~~d~~i~iwd~~~~~~~~  358 (430)
T 2xyi_A          281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS--PHNETILASSGTDRRLHVWDLSKIGEEQ  358 (430)
T ss_dssp             EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC--SSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred             EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC--CCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence            99999998 3 688999999999999998 56788889999999999995  777 4699999999999999987     


Q ss_pred             ---------CceeEEeecccCceEEEeeeC--c-EEEEEecCCcEEEEEccCc
Q psy7482         260 ---------GSHLWHIKASASRIKGLASHR--N-HLICITSAGDLVVWELNED  300 (327)
Q Consensus       260 ---------~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~v~iw~~~~~  300 (327)
                               .+.+..+.+|...|++++|+|  + +|++++.||.|++|++...
T Consensus       359 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          359 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             CHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             CccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence                     367788889999999999999  4 8999999999999999875

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.8e-37  Score=277.06  Aligned_cols=246  Identities=17%  Similarity=0.275  Sum_probs=206.8

Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC--CCeEEEeEEecccCCceeeEEEecC--CCEEEEEeCCCCEE
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG--SWQLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLR  123 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~  123 (327)
                      ..+.+|.+.|++++|+|++++|++|+.||.|++||+.  +++....+ .+|... |.+++|+|+  +++|++++.||.|+
T Consensus         3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l-~~h~~~-V~~l~~s~~~~~~~l~s~s~Dg~I~   80 (753)
T 3jro_A            3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTL-TGHEGP-VWRVDWAHPKFGTILASCSYDGKVL   80 (753)
T ss_dssp             -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEE-CCCSSC-EEEEEECCTTSCSEEEEEETTSCEE
T ss_pred             eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceec-cCCcCc-eEEEEecCCCCCCEEEEEeCCCeEE
Confidence            4678999999999999999999999999999999998  45666666 778877 999999987  99999999999999


Q ss_pred             EEEcCCCceeeeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCcee--eEe-cCCCceeEEEeec--
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGVL--QTL-KSESKVHSVCFLN--  195 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~~--~~~-~~~~~i~~~~~~~--  195 (327)
                      +||+.+++.........   +...|.+++|+|+  +..+++++ ||.|++||++++...  ..+ .+...|.+++|+|  
T Consensus        81 vwd~~~~~~~~~~~~~~---h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~  157 (753)
T 3jro_A           81 IWKEENGRWSQIAVHAV---HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT  157 (753)
T ss_dssp             EEEEETTEEEEEEEECC---CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred             EEECCCCcccccccccC---CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence            99999886433333332   3456999999999  88998887 999999999887432  233 3888999999999  


Q ss_pred             -----------C-ceEEEeCCCCcEEEEEcCCC----ceeEEeeecccceEEEEEEecCC---CcEEEEecCCCeEEEEE
Q psy7482         196 -----------E-TTVCTGNEESAITAYNLTDG----SHLWQIKASASRIKGLVFFSIPQ---ETTVCTGNEESAITAYN  256 (327)
Q Consensus       196 -----------~-~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~s~~---~~~l~~~~~d~~i~i~d  256 (327)
                                 + ..+++|+.||.|++||++++    .....+.+|..+|.+++|+  |+   ++++++++.||.|++||
T Consensus       158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s--p~~~~~~~l~s~s~Dg~I~iwd  235 (753)
T 3jro_A          158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS--PTVLLRSYLASVSQDRTCIIWT  235 (753)
T ss_dssp             ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC--CCCSSSEEEEEEESSSCEEEEE
T ss_pred             cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec--cCCCCCCEEEEEecCCEEEEec
Confidence                       4 78999999999999999877    4566778899999999995  78   89999999999999999


Q ss_pred             cCCCc-----eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         257 LTDGS-----HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       257 ~~~~~-----~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +.+++     .+.....|...|++++|+|  .+|++++.||.|++|++...
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~  286 (753)
T 3jro_A          236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  286 (753)
T ss_dssp             ESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred             CCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence            98875     3344456888999999999  89999999999999999864

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=5e-36  Score=254.15  Aligned_cols=243  Identities=16%  Similarity=0.324  Sum_probs=205.2

Q ss_pred             eeccCCccEEEEEe--C-CCEEEEecCCCeEEEEEccc----------cccccccccccccEEEEEECCCCC-eEEEecC
Q psy7482           9 VTHSHTASVRSVAA--T-SKLAASSGADETVVLYDMVK----------RKQSGALMQHEGTITCLKFTPEGS-HLISCSD   74 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~-~~~l~~~~~dg~v~~w~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~   74 (327)
                      ...+|.+.|++++|  + +.+||+++.||.|++||+.+          .+....+.+|...|.+++|+|++. +|++|+.
T Consensus       123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~  202 (430)
T 2xyi_A          123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD  202 (430)
T ss_dssp             EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred             EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence            34579999999999  3 67999999999999999987          567778889999999999999988 9999999


Q ss_pred             CCcEEEEEcCCCeE-------EEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCc---eeeeeeccccCc
Q psy7482          75 DGSIAIFRVGSWQL-------EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGR---SAYITNLSSYGV  143 (327)
Q Consensus        75 d~~i~iw~~~~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~  143 (327)
                      ||.|++|++..+..       ...+ ..|... |.+++|+| ++.+|++++.||.|++||++++.   ....+.     .
T Consensus       203 dg~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-----~  275 (430)
T 2xyi_A          203 DHTICLWDINATPKEHRVIDAKNIF-TGHTAV-VEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-----A  275 (430)
T ss_dssp             TSCEEEEETTSCCBGGGEEECSEEE-CCCSSC-EEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-----C
T ss_pred             CCeEEEEeCCCCCCCCceeccceee-cCCCCC-EeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-----c
Confidence            99999999987322       2334 567777 99999999 77899999999999999999763   333332     2


Q ss_pred             cccceEEEEEccCCc-EEEeec-CCeEEEEEecC-CceeeEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCC--
Q psy7482         144 GFENLDSVVWSPEGL-LYAIPI-QNKAVVFSVEK-AGVLQTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTD--  215 (327)
Q Consensus       144 ~~~~v~~~~~~~~~~-~l~~~~-~~~i~i~d~~~-~~~~~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~--  215 (327)
                      +...+.+++|+|++. ++++++ ||.|++||+++ .+.+..+. |...|.+++|+|+  .++++++.|+.|++||+..  
T Consensus       276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~  355 (430)
T 2xyi_A          276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG  355 (430)
T ss_dssp             CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred             CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence            244599999999987 677776 99999999998 55677776 8899999999998  3689999999999999987  


Q ss_pred             ------------CceeEEeeecccceEEEEEEecCCCc-EEEEecCCCeEEEEEcCCC
Q psy7482         216 ------------GSHLWQIKASASRIKGLVFFSIPQET-TVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       216 ------------~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~~~~~d~~i~i~d~~~~  260 (327)
                                  .+.+..+.+|...|++++|+  |++. ++++++.||.|++|++...
T Consensus       356 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          356 EEQSTEDAEDGPPELLFIHGGHTAKISDFSWN--PNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             CCCCHHHHHHCCTTEEEECCCCSSCEEEEEEC--SSSTTEEEEEETTSEEEEEEECHH
T ss_pred             cccCccccccCCcceEEEcCCCCCCceEEEEC--CCCCCEEEEEECCCCEEEeEcccc
Confidence                        35677778899999999995  8888 8999999999999998653

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=3.5e-35  Score=242.62  Aligned_cols=271  Identities=8%  Similarity=0.053  Sum_probs=210.4

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCC
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~   86 (327)
                      ..+|...|.+++|  ++++||+|+.++ +++||+.+++.......  ..+..+++.++++.+ ++++.|+.|++||..++
T Consensus        15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~   91 (355)
T 3vu4_A           15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK   91 (355)
T ss_dssp             ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred             cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence            3679999999999  899999998775 78999988776554432  247788888888877 56788899999999999


Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEe--e
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAI--P  163 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~  163 (327)
                      +.+..+ . +... |.++.++++.  ++++ .|+.|++||+.++ +.+..+..        +...+++++  .+++.  +
T Consensus        92 ~~~~~~-~-~~~~-v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--------~~~~~~~s~--~~la~~sg  155 (355)
T 3vu4_A           92 QDVSRI-K-VDAP-VKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR--------FGGVCEFSN--GLLVYSNE  155 (355)
T ss_dssp             EEEEEE-E-CSSC-EEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE--------EEEEEEEET--TEEEEEES
T ss_pred             cEEEEE-E-CCCc-eEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc--------CCceEEEEc--cEEEEeCC
Confidence            998887 3 4445 9999998763  4444 4789999999987 55444332        144556666  55555  3


Q ss_pred             c-CCeEEEEEecCCc---------------e-eeEec-CCCceeEEEeecC-ceEEEeCCCCc-EEEEEcCCCceeEEee
Q psy7482         164 I-QNKAVVFSVEKAG---------------V-LQTLK-SESKVHSVCFLNE-TTVCTGNEESA-ITAYNLTDGSHLWQIK  223 (327)
Q Consensus       164 ~-~~~i~i~d~~~~~---------------~-~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~-i~i~d~~~~~~~~~~~  223 (327)
                      . +|.|++||+++++               + +..+. |...|.+++|+|+ .+|++++.|++ |++||+++++.+..+.
T Consensus       156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~  235 (355)
T 3vu4_A          156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR  235 (355)
T ss_dssp             SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred             CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence            4 8999999999865               1 45555 8899999999999 78999999998 9999999999999998


Q ss_pred             -e-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce--eEEee---------------------cccCceEEEee
Q psy7482         224 -A-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH--LWHIK---------------------ASASRIKGLAS  278 (327)
Q Consensus       224 -~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~---------------------~~~~~v~~~~~  278 (327)
                       + |...|.+++|+  |++++|++++.|+.|++||++.+..  ...+.                     .+..+...++|
T Consensus       236 ~g~h~~~v~~~~~s--~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  313 (355)
T 3vu4_A          236 RGLDRADVVDMKWS--TDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAW  313 (355)
T ss_dssp             CTTCCSCEEEEEEC--TTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEE
T ss_pred             cCCCCCcEEEEEEC--CCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEE
Confidence             5 99999999994  9999999999999999999976531  11111                     11123467899


Q ss_pred             eC--cEEEEEecCCcEEEEEccCcc
Q psy7482         279 HR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       279 ~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      ++  +.|++++.||.+++|++..+.
T Consensus       314 ~~d~~~l~~~~~dg~~~~~~~~~~~  338 (355)
T 3vu4_A          314 ISESSLVVVWPHTRMIETFKVVFDD  338 (355)
T ss_dssp             SSSSEEEEEETTTTEEEEEEEEEET
T ss_pred             eCCCCEEEEEeCCCeEEEEEEEcCC
Confidence            99  799999999999999998763

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-35  Score=250.93  Aligned_cols=262  Identities=8%  Similarity=0.090  Sum_probs=211.8

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe---EEEeEEe------------------------------------
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ---LEKLFKK------------------------------------   94 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~------------------------------------   94 (327)
                      ..++.+++|+|+|++|+++ .++.|++||+.+++   .+..+..                                    
T Consensus         4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (450)
T 2vdu_B            4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD   82 (450)
T ss_dssp             ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred             cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence            3578899999999966655 57799999999888   5555421                                    


Q ss_pred             -----------------cccCCceeeEEEecCCCEE-EEEeCCCCEEEEEcC--CCceeeeeeccccCccccceEEEEEc
Q psy7482          95 -----------------AHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLV--KGRSAYITNLSSYGVGFENLDSVVWS  154 (327)
Q Consensus        95 -----------------~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~  154 (327)
                                       .|... |.+++|+|++++| ++++.||.|++||+.  +++....+.....   ...+.+++|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~---~~~v~~~~~s  158 (450)
T 2vdu_B           83 SIKRTAAKVPSPGLGAPPIYSY-IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF---SKRPNAISIA  158 (450)
T ss_dssp             -----------------CCCCC-EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC---SSCEEEEEEC
T ss_pred             cccccCccccCCCCCCCccCCc-eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC---CCCceEEEEc
Confidence                             11123 9999999999996 889899999999999  7777666543222   2349999999


Q ss_pred             cCCcEEEeec-CCeEEEEEecCCceee----Eec-CCCceeEEEeecC---c-eEEEeCCCCcEEEEEcCCCceeEE-ee
Q psy7482         155 PEGLLYAIPI-QNKAVVFSVEKAGVLQ----TLK-SESKVHSVCFLNE---T-TVCTGNEESAITAYNLTDGSHLWQ-IK  223 (327)
Q Consensus       155 ~~~~~l~~~~-~~~i~i~d~~~~~~~~----~~~-~~~~i~~~~~~~~---~-~l~~~~~d~~i~i~d~~~~~~~~~-~~  223 (327)
                      |++++|++++ ++.+++|++.+++...    .+. |...|.+++|+|+   + ++++++.|+.|++||+++++.+.. +.
T Consensus       159 p~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~  238 (450)
T 2vdu_B          159 EDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF  238 (450)
T ss_dssp             TTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred             CCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec
Confidence            9999999987 8999999998877553    444 8889999999997   6 789999999999999999988877 56


Q ss_pred             ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc-------------------------cCceEEEee
Q psy7482         224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS-------------------------ASRIKGLAS  278 (327)
Q Consensus       224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------------------~~~v~~~~~  278 (327)
                      +|...|.+++|  + ++++|++++.|+.|++||+.+++++..+..+                         ...|.+++|
T Consensus       239 ~h~~~v~~~~~--s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~  315 (450)
T 2vdu_B          239 GHKHFVSSICC--G-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK  315 (450)
T ss_dssp             CCSSCEEEEEE--C-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred             CCCCceEEEEE--C-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence            89999999999  5 9999999999999999999999988887633                         346889999


Q ss_pred             eC--cEEEEEe-cCCcEEEEEc--cCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         279 HR--NHLICIT-SAGDLVVWEL--NEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       279 ~~--~~l~~~~-~dg~v~iw~~--~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +|  ++|++++ .|+.|++|++  ....  ....+........|.+++|+|+
T Consensus       316 ~~~~~~l~~~~~~d~~i~iw~~~~~~~~--~l~~~~~~~~~~~v~~~~~~~~  365 (450)
T 2vdu_B          316 SKNLPFVAFFVEATKCIIILEMSEKQKG--DLALKQIITFPYNVISLSAHND  365 (450)
T ss_dssp             CSSSSEEEEEETTCSEEEEEEECSSSTT--CEEEEEEEECSSCEEEEEEETT
T ss_pred             eCCCCEEEEEECCCCeEEEEEeccCCCC--ceeeccEeccCCceEEEEecCC
Confidence            99  7888888 8999999999  3331  2333333333378999999986

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.6e-35  Score=249.07  Aligned_cols=261  Identities=16%  Similarity=0.202  Sum_probs=211.9

Q ss_pred             cEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeE----EEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCC
Q psy7482          56 TITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQL----EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVK  129 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~  129 (327)
                      ....++++|+...++ +++.||.|++|++.....    ...+ .+|... |.+++|+| ++++|++++.||.|++||+.+
T Consensus        36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~h~~~-V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~  113 (402)
T 2aq5_A           36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLV-CGHTAP-VLDIAWCPHNDNVIASGSEDCTVMVWEIPD  113 (402)
T ss_dssp             SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCB-CCCSSC-EEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred             CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceE-ecCCCC-EEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence            344678888765444 578899999999965432    2334 677777 99999999 999999999999999999988


Q ss_pred             Cce-------eeeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEecCCceeeEe--c-CCCceeEEEeecC-
Q psy7482         130 GRS-------AYITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVEKAGVLQTL--K-SESKVHSVCFLNE-  196 (327)
Q Consensus       130 ~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~~~~~~~~~--~-~~~~i~~~~~~~~-  196 (327)
                      +..       ...+.     .|...|.+++|+|++ .++++++ |+.|++||+++++.+..+  . |...|.+++|+|+ 
T Consensus       114 ~~~~~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~  188 (402)
T 2aq5_A          114 GGLVLPLREPVITLE-----GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDG  188 (402)
T ss_dssp             TCCSSCBCSCSEEEE-----CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTS
T ss_pred             CCCccccCCceEEec-----CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCC
Confidence            742       22222     234569999999998 6888876 999999999999999888  4 8899999999998 


Q ss_pred             ceEEEeCCCCcEEEEEcCCCceeEEe-eecccc-eEEEEEEecCCCcEEEEe---cCCCeEEEEEcCCCce-eEEee-cc
Q psy7482         197 TTVCTGNEESAITAYNLTDGSHLWQI-KASASR-IKGLVFFSIPQETTVCTG---NEESAITAYNLTDGSH-LWHIK-AS  269 (327)
Q Consensus       197 ~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~-v~~~~~~~s~~~~~l~~~---~~d~~i~i~d~~~~~~-~~~~~-~~  269 (327)
                      .++++++.|+.|++||+++++.+..+ ..|... +..+.|+  |++++|++|   +.|+.|++||+++++. +.... .|
T Consensus       189 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~  266 (402)
T 2aq5_A          189 ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFV--SEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDT  266 (402)
T ss_dssp             SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEEC--STTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC
T ss_pred             CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEc--CCCcEEEEeccCCCCceEEEEcCccccCCceEEeccC
Confidence            78999999999999999999998888 678775 8899995  899999999   8999999999998764 33333 46


Q ss_pred             cCceEEEeeeC--cEEE-EEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         270 ASRIKGLASHR--NHLI-CITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       270 ~~~v~~~~~~~--~~l~-~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ...+.+++|+|  ++|+ +++.||.|++|++..+. .....+....+...|.+++|+|+.
T Consensus       267 ~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~-~~~~~l~~~~~~~~v~~~~~sp~~  325 (402)
T 2aq5_A          267 SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA-PFLHYLSMFSSKESQRGMGYMPKR  325 (402)
T ss_dssp             CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST-TCEEEEEEECCSSCCSEEEECCGG
T ss_pred             CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC-cceEeecccccCCcccceEEeccc
Confidence            77899999999  6665 56679999999999872 114455555577899999999973

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.4e-37  Score=258.46  Aligned_cols=276  Identities=13%  Similarity=0.110  Sum_probs=208.7

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      .+|...|.+++|  +|       .++.+.+|+.+ +.....+ .|...|.+++|+|+|++||+++.||.|++||.+.  .
T Consensus        49 ~gh~~~v~~V~FsPdg-------~~~~~~~~~~~-~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~  117 (588)
T 2j04_A           49 NCNSKNLFHVKEFPLE-------FENKLDFELAQ-QNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--M  117 (588)
T ss_dssp             SSBGGGTEEEEEECCC-------CCCTTTTSCCC-SSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--E
T ss_pred             cCCCccEEEEEECCCC-------CcceEEEEeCC-CceEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--e
Confidence            589999999999  55       45555555543 2223333 4588899999999999999999999999999653  5


Q ss_pred             EEeEEecccC----CceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce-------eeeeeccccCccccceEEEEEccCC
Q psy7482          89 EKLFKKAHKG----TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS-------AYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        89 ~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      +..+ . |..    ..+.+++|+|||++|++|+.||+|++||+.++..       +..+.... ..|...|.+++|+|+|
T Consensus       118 l~~l-~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~-~gh~~~V~sVawSPdg  194 (588)
T 2j04_A          118 LTNL-D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD-AGSKDWVTHIVWYEDV  194 (588)
T ss_dssp             EEEC-C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC-TTCCCCEEEEEEETTE
T ss_pred             eeec-c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc-ccccccEEEEEEcCCc
Confidence            5555 3 442    1399999999999999999999999999988753       22222222 2355679999999999


Q ss_pred             cEEEeecCCeEEEEEecCCce---eeEec--CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482         158 LLYAIPIQNKAVVFSVEKAGV---LQTLK--SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL  232 (327)
Q Consensus       158 ~~l~~~~~~~i~i~d~~~~~~---~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  232 (327)
                       +++++.|+.+++||+.+++.   ...+.  |...|.+++|+ ++.+++++ ++.|++||+.+++......+|...+..+
T Consensus       195 -Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~v  271 (588)
T 2j04_A          195 -LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHII  271 (588)
T ss_dssp             -EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEE
T ss_pred             -EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEE
Confidence             66666699999999988774   34553  66889999999 77888887 6999999999877644444799999999


Q ss_pred             EEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccCccCCCceeeeecC
Q psy7482         233 VFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSATN  312 (327)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~  312 (327)
                      +|..+|++..++++++||. ++|...                .++++|.-.++++.|+++++|+...+   ...   ...
T Consensus       272 a~~~s~d~~~La~a~edG~-klw~~d----------------~~~~spd~~l~a~~d~~v~lW~~~g~---~l~---~~~  328 (588)
T 2j04_A          272 PLNHEKESTILLMSNKTSY-KVLLED----------------ELHVTADNIIAPYLEKKFKKWSTIWN---EFN---NYE  328 (588)
T ss_dssp             EETTCSSCEEEEECSSCEE-EEEESS----------------SEEEECCCSSHHHHHHHHHHTTTTTT---SSS---SSC
T ss_pred             EeeeCCCCCEEEEEcCCCC-EEEeec----------------cEEECCCceEEEEcCCEEEEEECCCC---cee---eec
Confidence            9911289999999999999 999976                25577733333335899999987655   211   233


Q ss_pred             CCCceEEEEeCCCC
Q psy7482         313 DGCRFTCLAIRPPV  326 (327)
Q Consensus       313 ~~~~i~~l~~~p~~  326 (327)
                      ....|.+++|+|+-
T Consensus       329 ~~~~I~~va~SPdG  342 (588)
T 2j04_A          329 TTLVIHGISLSPDG  342 (588)
T ss_dssp             CEEEEEEEEECTTS
T ss_pred             cceEEEEEEECCCC
Confidence            35568899999974

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=8.1e-33  Score=231.72  Aligned_cols=275  Identities=11%  Similarity=0.140  Sum_probs=224.0

Q ss_pred             cCCccEEEEEe--CCCEE-EEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCe
Q psy7482          12 SHTASVRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l-~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~   87 (327)
                      +| ..+.+++|  +++++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+|++++|+ +++.++.|++||+.+++
T Consensus        30 ~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~  107 (391)
T 1l0q_A           30 VG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT  107 (391)
T ss_dssp             CS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred             cC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCe
Confidence            44 45899999  78766 677799999999999999888887655 899999999999875 55567999999999999


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE-eec-
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA-IPI-  164 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-  164 (327)
                      ....+ .. ... +.+++|+|+++.+ ++++.++.|++||+.+++....+.....      +.+++|+|+++.++ ++. 
T Consensus       108 ~~~~~-~~-~~~-~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~~~dg~~l~~~~~~  178 (391)
T 1l0q_A          108 VAGTV-KT-GKS-PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS------PKGIAVTPDGTKVYVANFD  178 (391)
T ss_dssp             EEEEE-EC-SSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS------EEEEEECTTSSEEEEEETT
T ss_pred             EEEEE-eC-CCC-cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC------cceEEECCCCCEEEEEeCC
Confidence            88777 33 334 8999999999977 6777899999999999887766655433      78999999998774 444 


Q ss_pred             CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC---CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482         165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN---EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      ++.|++||+++++....+.+...+.+++|+|+ .++++++   .++.|++||+++++.+..+..|.. +.+++|+  |++
T Consensus       179 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s--~dg  255 (391)
T 1l0q_A          179 SMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVT--PDG  255 (391)
T ss_dssp             TTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEEC--TTS
T ss_pred             CCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEc--cCC
Confidence            89999999999999888888889999999998 6777776   689999999999998888887654 7888984  899


Q ss_pred             cEE-EEecCCCeEEEEEcCCCceeEEeecccCceE---EEe------------eeC------------cEEEEEecCCcE
Q psy7482         241 TTV-CTGNEESAITAYNLTDGSHLWHIKASASRIK---GLA------------SHR------------NHLICITSAGDL  292 (327)
Q Consensus       241 ~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~---~~~------------~~~------------~~l~~~~~dg~v  292 (327)
                      +++ ++++.|+.|++||+.+++.+..+..|..+..   .+.            |+.            -.+...+.|..+
T Consensus       256 ~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~  335 (391)
T 1l0q_A          256 KKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATE  335 (391)
T ss_dssp             SEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSE
T ss_pred             CEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceE
Confidence            877 6778899999999999999888877654421   011            221            135566678899


Q ss_pred             EEEEccCc
Q psy7482         293 VVWELNED  300 (327)
Q Consensus       293 ~iw~~~~~  300 (327)
                      ++|++..+
T Consensus       336 ~~W~~~~g  343 (391)
T 1l0q_A          336 WKWDFGDG  343 (391)
T ss_dssp             EEEECSSS
T ss_pred             EEEECCCC
Confidence            99999776

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=2.9e-34  Score=240.34  Aligned_cols=229  Identities=15%  Similarity=0.114  Sum_probs=166.8

Q ss_pred             CCCCCeEEEecCCCcEEEEEcCCCeEEEeE----EecccCCceeeEEEec--------CCCEEEEEeCCCCEEEEEcCCC
Q psy7482          63 TPEGSHLISCSDDGSIAIFRVGSWQLEKLF----KKAHKGTAVNHISIHP--------SGKLALSVGKDKTLRTWNLVKG  130 (327)
Q Consensus        63 ~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~----~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg~i~iwd~~~~  130 (327)
                      .+++.+|++++.|++|++||.++++.....    ..+|.+. |++++|+|        ++++|++++.|++|++||++++
T Consensus        98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~-v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~  176 (393)
T 4gq1_A           98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNF-VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE  176 (393)
T ss_dssp             CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSC-EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred             CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCc-eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence            335568999999999999999888654321    1578887 99999998        7889999999999999999877


Q ss_pred             ceeeeeeccccCccccceEEEEEccCCc-EEEeec-CCeEEEEEecCCceeeEe--------------------------
Q psy7482         131 RSAYITNLSSYGVGFENLDSVVWSPEGL-LYAIPI-QNKAVVFSVEKAGVLQTL--------------------------  182 (327)
Q Consensus       131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~~~i~i~d~~~~~~~~~~--------------------------  182 (327)
                      .........     ..++.+++|+|++. +|++++ |+.|++||+++++.....                          
T Consensus       177 ~~~~~~~~~-----~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~  251 (393)
T 4gq1_A          177 GPILAGYPL-----SSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS  251 (393)
T ss_dssp             EEEEEEEEC-----SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------
T ss_pred             ceeeeecCC-----CCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc
Confidence            665443322     23499999999874 677776 999999999887543321                          


Q ss_pred             cCCCceeEEEee-cC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEE------------------EEEecCCCcE
Q psy7482         183 KSESKVHSVCFL-NE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL------------------VFFSIPQETT  242 (327)
Q Consensus       183 ~~~~~i~~~~~~-~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~------------------~~~~s~~~~~  242 (327)
                      .+...+.++.|+ |+ ..+++++.|+.+++||+..++....+..|...+..+                  .+++..++.+
T Consensus       252 ~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (393)
T 4gq1_A          252 GIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYF  331 (393)
T ss_dssp             CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEE
T ss_pred             cccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEE
Confidence            145678889987 56 789999999999999998877666655554443332                  3333235667


Q ss_pred             EEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         243 VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       243 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      +++|+.||.|++||+.+++....+..|..+|++++|+|  ++||+++.+| +.+|++.
T Consensus       332 ~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          332 ATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             EEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             EEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence            88899999999999999999988899999999999999  8999998665 6666654

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=6.7e-35  Score=244.21  Aligned_cols=230  Identities=13%  Similarity=0.083  Sum_probs=173.1

Q ss_pred             CCCEEEEecCCCeEEEEEcccccc-----ccccccccccEEEEEECC--------CCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQ-----SGALMQHEGTITCLKFTP--------EGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      ++.+||+|+.|++|+|||..+++.     +..+.+|.+.|++++|+|        ++++||+|+.|++|+|||+.++...
T Consensus       100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~  179 (393)
T 4gq1_A          100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI  179 (393)
T ss_dssp             EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred             CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence            556899999999999999987753     456789999999999998        7899999999999999999888877


Q ss_pred             EeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCCCceeeeeecc--------------------ccCccccce
Q psy7482          90 KLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITNLS--------------------SYGVGFENL  148 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------------~~~~~~~~v  148 (327)
                      ..+ ..|... +.+++|+|++ .+|++++.||.|++||+++++........                    ....+...+
T Consensus       180 ~~~-~~~~~~-v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v  257 (393)
T 4gq1_A          180 LAG-YPLSSP-GISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL  257 (393)
T ss_dssp             EEE-EECSSC-EEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred             eee-cCCCCC-cEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence            777 677777 9999999977 47999999999999999887643322110                    012344568


Q ss_pred             EEEEEc-cCCcEEEeec-CCeEEEEEecCCceeeEec-CCCc------------------eeEEEeecC--c-eEEEeCC
Q psy7482         149 DSVVWS-PEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESK------------------VHSVCFLNE--T-TVCTGNE  204 (327)
Q Consensus       149 ~~~~~~-~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~------------------i~~~~~~~~--~-~l~~~~~  204 (327)
                      .++.|+ |+++.+++++ |+.+++||+..++....+. +...                  .....++|.  + ++++|+.
T Consensus       258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~  337 (393)
T 4gq1_A          258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ  337 (393)
T ss_dssp             SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred             eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence            888886 7899998887 9999999998776554443 2222                  222334442  3 5677889


Q ss_pred             CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         205 ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       205 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      ||.|++||+.+++....+..|..+|.+++|+  |+|++||+++.+| +.+|.+
T Consensus       338 Dg~V~lwd~~~~~~~~~~~~~~~~V~svafs--pdG~~LA~as~~G-v~lvrL  387 (393)
T 4gq1_A          338 HGLIQLINTYEKDSNSIPIQLGMPIVDFCWH--QDGSHLAIATEGS-VLLTRL  387 (393)
T ss_dssp             TTEEEEEETTCTTCCEEEEECSSCEEEEEEC--TTSSEEEEEESSE-EEEEEE
T ss_pred             CCEEEEEECCCCcEEEEecCCCCcEEEEEEc--CCCCEEEEEeCCC-eEEEEE
Confidence            9999999999999988888899999999995  9999999998766 555554

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=2.7e-33  Score=230.59  Aligned_cols=267  Identities=15%  Similarity=0.184  Sum_probs=189.9

Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC----eEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCC
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW----QLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKT  121 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~  121 (327)
                      ..+.+|.+.|++++|+|++++|++|+.||.|++||+.++    +....+ .+|... |.+++|+|  ++++|++++.||.
T Consensus         5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~d~~~l~s~~~dg~   82 (351)
T 3f3f_A            5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSW-RAHDSS-IVAIDWASPEYGRIIASASYDKT   82 (351)
T ss_dssp             CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEE-ECCSSC-EEEEEECCGGGCSEEEEEETTSC
T ss_pred             ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceeccee-ccCCCc-EEEEEEcCCCCCCEEEEEcCCCe
Confidence            346789999999999999999999999999999999876    455555 678777 99999999  6999999999999


Q ss_pred             EEEEEcCCCcee-------eeeeccccCccccceEEEEEccC--CcEEEeec-CCeEEEEEecCCceeeEe---------
Q psy7482         122 LRTWNLVKGRSA-------YITNLSSYGVGFENLDSVVWSPE--GLLYAIPI-QNKAVVFSVEKAGVLQTL---------  182 (327)
Q Consensus       122 i~iwd~~~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~-~~~i~i~d~~~~~~~~~~---------  182 (327)
                      |++||+++++..       .....   ..+...+.+++|+|+  +.++++++ |+.|++||+++++.+..+         
T Consensus        83 v~vwd~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~  159 (351)
T 3f3f_A           83 VKLWEEDPDQEECSGRRWNKLCTL---NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL  159 (351)
T ss_dssp             EEEEEECTTSCTTSSCSEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred             EEEEecCCCcccccccCcceeeee---cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence            999999886421       11112   223456999999999  99888887 999999999887754432         


Q ss_pred             -----cCCCceeEEEeecC----ceEEEeCCCCcEEEEEcCCCce--eEEeeecccceEEEEEEecCCC----cEEEEec
Q psy7482         183 -----KSESKVHSVCFLNE----TTVCTGNEESAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQE----TTVCTGN  247 (327)
Q Consensus       183 -----~~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~----~~l~~~~  247 (327)
                           .+...+.+++|+|+    ..+++++.++.+.+|+...++.  +..+.+|...|.+++|+  |++    ++|++++
T Consensus       160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~--p~~~~~~~~l~s~~  237 (351)
T 3f3f_A          160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWA--PSIGRWYQLIATGC  237 (351)
T ss_dssp             SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEEC--CCSSCSSEEEEEEE
T ss_pred             ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEEC--CCCCCcceEEEEEc
Confidence                 25678999999984    6899999999998888877765  67778899999999995  787    8999999


Q ss_pred             CCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEe----cCCcEEEEEccCccCCCceeee-ecCCCCceEEE
Q psy7482         248 EESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICIT----SAGDLVVWELNEDVTREPQRVS-ATNDGCRFTCL  320 (327)
Q Consensus       248 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~----~dg~v~iw~~~~~~~~~~~~~~-~~~~~~~i~~l  320 (327)
                      .||.|++||++++........+..........+  ..+..+.    ....+.+|+....     ..+. ...|...|+++
T Consensus       238 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~  312 (351)
T 3f3f_A          238 KDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV-----ELLSEHDDHNGEVWSV  312 (351)
T ss_dssp             TTSCEEEEEEEECC---------------------------------------CCSEEE-----EEEEEECTTSSCEEEE
T ss_pred             CCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc-----cEEEEEecccccEEEE
Confidence            999999999988765554444433333333433  3333333    2333445544333     2222 23477889999


Q ss_pred             EeCCCC
Q psy7482         321 AIRPPV  326 (327)
Q Consensus       321 ~~~p~~  326 (327)
                      +|+|+.
T Consensus       313 ~~s~~~  318 (351)
T 3f3f_A          313 SWNLTG  318 (351)
T ss_dssp             EECSSS
T ss_pred             EEcCCC
Confidence            999973

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=4.9e-32  Score=230.01  Aligned_cols=276  Identities=14%  Similarity=0.103  Sum_probs=218.1

Q ss_pred             eEEEEEcccc--ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE----ecccCCceeeEEEec
Q psy7482          35 TVVLYDMVKR--KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK----KAHKGTAVNHISIHP  108 (327)
Q Consensus        35 ~v~~w~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~~~~~~v~~~~~~~  108 (327)
                      .|..+|..++  +.+..+..+ ..+.+++|+|++.++++++.++.|++||+.+++......    ..|... |.+++|++
T Consensus       102 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~-v~~~~~~~  179 (433)
T 3bws_A          102 KLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGF-VETISIPE  179 (433)
T ss_dssp             CEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCE-EEEEEEGG
T ss_pred             EEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCc-eeEEEEcC
Confidence            4444444334  445555544 346699999988888888889999999999988876431    345555 99999999


Q ss_pred             CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE-eec-CCeEEEEEecCCceeeEecCCC
Q psy7482         109 SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA-IPI-QNKAVVFSVEKAGVLQTLKSES  186 (327)
Q Consensus       109 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-~~~i~i~d~~~~~~~~~~~~~~  186 (327)
                      +++++++++.|+.|++||+++++....+...     ...+.+++|+|+++.++ ++. ++.|++||+++++.+..+....
T Consensus       180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~  254 (433)
T 3bws_A          180 HNELWVSQMQANAVHVFDLKTLAYKATVDLT-----GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG  254 (433)
T ss_dssp             GTEEEEEEGGGTEEEEEETTTCCEEEEEECS-----SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS
T ss_pred             CCEEEEEECCCCEEEEEECCCceEEEEEcCC-----CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC
Confidence            9999999999999999999988877665432     23499999999998774 453 8999999999999988888778


Q ss_pred             ceeEEEeecC-ceEEEeC--------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcE-EEEecCCCeEEEEE
Q psy7482         187 KVHSVCFLNE-TTVCTGN--------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT-VCTGNEESAITAYN  256 (327)
Q Consensus       187 ~i~~~~~~~~-~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~-l~~~~~d~~i~i~d  256 (327)
                      .+.+++|+|+ +.+++++        .|+.|++||+++++.+..+ .|...+..++|.  |+++. +++++.|+.|++||
T Consensus       255 ~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~--~~g~~l~~~~~~~~~v~v~d  331 (433)
T 3bws_A          255 LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSG--NTENKIYVSDMCCSKIEVYD  331 (433)
T ss_dssp             EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEEC--SSTTEEEEEETTTTEEEEEE
T ss_pred             CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEEC--CCCCEEEEEecCCCEEEEEE
Confidence            8999999999 5777776        5889999999988876665 455678899994  88864 56778999999999


Q ss_pred             cCCCceeEEeecccCceEEEeeeC--cEEEEEec---------------CCcEEEEEccCccCCCceeeeecCCCCceEE
Q psy7482         257 LTDGSHLWHIKASASRIKGLASHR--NHLICITS---------------AGDLVVWELNEDVTREPQRVSATNDGCRFTC  319 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~---------------dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~  319 (327)
                      +.+++.+..+. +...+.+++|+|  +++++++.               ||.|++||+.++     ..+........+.+
T Consensus       332 ~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~-----~~~~~~~~~~~~~~  405 (433)
T 3bws_A          332 LKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD-----TVKEFWEAGNQPTG  405 (433)
T ss_dssp             TTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT-----EEEEEEECSSSEEE
T ss_pred             CCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC-----cEEEEecCCCCCce
Confidence            99998887776 667899999999  67777776               579999999887     22233334567999


Q ss_pred             EEeCCCC
Q psy7482         320 LAIRPPV  326 (327)
Q Consensus       320 l~~~p~~  326 (327)
                      ++|+|+.
T Consensus       406 ~~~s~dg  412 (433)
T 3bws_A          406 LDVSPDN  412 (433)
T ss_dssp             EEECTTS
T ss_pred             EEEcCCC
Confidence            9999973

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.2e-34  Score=234.27  Aligned_cols=227  Identities=9%  Similarity=0.084  Sum_probs=184.8

Q ss_pred             EEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC---------C
Q psy7482          60 LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK---------G  130 (327)
Q Consensus        60 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~  130 (327)
                      ..+.+++.+|++|+.||.|++||+.+++.+..+ .  ... |.++.|+|+   +++++.|+.|++|+...         +
T Consensus        42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~-~--~~~-v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~  114 (343)
T 3lrv_A           42 KSMYYDKWVCMCRCEDGALHFTQLKDSKTITTI-T--TPN-PRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTN  114 (343)
T ss_dssp             SSSSEEEEEEEEEEETTEEEEEEESSSSCEEEE-E--EEC-CCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTC
T ss_pred             hhhcCCCCEEEEECCCCcEEEEECCCCcEEEEE-e--cCC-ceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCc
Confidence            344567889999999999999999999988887 3  334 888899988   99999999999997763         2


Q ss_pred             ceeeeeeccccCccccceEEEEEcc--CCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeecC-ceEEEeCC
Q psy7482         131 RSAYITNLSSYGVGFENLDSVVWSP--EGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNE  204 (327)
Q Consensus       131 ~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~  204 (327)
                      +.+.....    .+..+|.+++|+|  +++++++++ |+.|++||+++++......  +...+.+++|+|+ .++++|+.
T Consensus       115 ~~~~~~~~----~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~  190 (343)
T 3lrv_A          115 KVLREIEV----DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP  190 (343)
T ss_dssp             CEEEEEEC----CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT
T ss_pred             ceeEEeec----CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC
Confidence            22222221    1234699999999  999999887 9999999999999877664  5567999999999 78889999


Q ss_pred             CCcEEEEEcCCCcee-EEeee-cccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec---ccCceE--EEe
Q psy7482         205 ESAITAYNLTDGSHL-WQIKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA---SASRIK--GLA  277 (327)
Q Consensus       205 d~~i~i~d~~~~~~~-~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~--~~~  277 (327)
                      ||.|++||+++++.+ ..+.. |..+|.+++|+  |++.+|++++ |+.|++||+++++.+..+..   |...+.  +++
T Consensus       191 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs--~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (343)
T 3lrv_A          191 DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFA--DNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYD  267 (343)
T ss_dssp             TSCEEEEESSCTTSCCEECCCCTTSCEEEEEEC--TTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEE
T ss_pred             CCEEEEEECCCCCCCccEEeccCCCCEEEEEEe--CCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEE
Confidence            999999999999887 78888 99999999995  9999999999 55999999999887655543   444444  599


Q ss_pred             eeC--cEEEEEec-CCcEEEEEccCc
Q psy7482         278 SHR--NHLICITS-AGDLVVWELNED  300 (327)
Q Consensus       278 ~~~--~~l~~~~~-dg~v~iw~~~~~  300 (327)
                      |+|  ++|++++. |+.+++|++...
T Consensus       268 ~~~~g~~l~~~s~~d~~i~v~~~~~~  293 (343)
T 3lrv_A          268 IDDSGKNMIAYSNESNSLTIYKFDKK  293 (343)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             ECCCCCEEEEecCCCCcEEEEEEccc
Confidence            999  89999888 999999999765

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=8.3e-33  Score=219.44  Aligned_cols=259  Identities=12%  Similarity=0.091  Sum_probs=183.9

Q ss_pred             EEEEecCCCeEEEEEcccc---ccccccccccccEEEEEECCCCCeEE-Ee-cCCCcEEEEEcC--CC--e-EEEeEEec
Q psy7482          26 LAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGSHLI-SC-SDDGSIAIFRVG--SW--Q-LEKLFKKA   95 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~~d~~i~iw~~~--~~--~-~~~~~~~~   95 (327)
                      -+++++ +..|++|+..++   +.++++..|+.+|..+.+.||..-|+ ++ +.-..-.++-+.  ..  . .......+
T Consensus        56 ~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g  134 (356)
T 2w18_A           56 CIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG  134 (356)
T ss_dssp             EEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred             EEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence            466666 668999999998   88999999999999999999654332 22 111111222221  10  0 11111123


Q ss_pred             ccCCceeeEEEecCCCEEEEEe--CCCCEEEEEcC-CCceeeeeeccccCccccceEEEEEcc---CCcEEEeec-CCeE
Q psy7482          96 HKGTAVNHISIHPSGKLALSVG--KDKTLRTWNLV-KGRSAYITNLSSYGVGFENLDSVVWSP---EGLLYAIPI-QNKA  168 (327)
Q Consensus        96 ~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~-~~~i  168 (327)
                      +... |..+   ++++++.+++  .|+.|++|++. +++.+.....+..     .+..++|+|   ++.+|++++ |++|
T Consensus       135 ~~~~-v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~-----~v~~l~fs~~~g~~~~LaSgS~D~TI  205 (356)
T 2w18_A          135 NIKA-VLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPP-----EETILTFAEVQGMQEALLGTTIMNNI  205 (356)
T ss_dssp             EEEE-EEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCC-----SSCEEEEEEEETSTTEEEEEETTSEE
T ss_pred             CeEE-EEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCC-----ceeeEEeeccCCCCceEEEecCCCcE
Confidence            3333 5443   5666555543  58999999994 4666555544443     377888888   778999987 9999


Q ss_pred             EEEEecCCceeeEec-CC---CceeEEEeecCc-eE------------EEeCCCCcEEEEEcCCCceeEEe-----eecc
Q psy7482         169 VVFSVEKAGVLQTLK-SE---SKVHSVCFLNET-TV------------CTGNEESAITAYNLTDGSHLWQI-----KASA  226 (327)
Q Consensus       169 ~i~d~~~~~~~~~~~-~~---~~i~~~~~~~~~-~l------------~~~~~d~~i~i~d~~~~~~~~~~-----~~~~  226 (327)
                      ++||+++++.++++. +.   ..+.+++|+|++ ++            ++|+.|++|++||..+++.+..+     .+|.
T Consensus       206 kIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~  285 (356)
T 2w18_A          206 VIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQA  285 (356)
T ss_dssp             EEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCC
T ss_pred             EEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCc
Confidence            999999999999997 32   357778999984 33            56789999999999999887655     3555


Q ss_pred             cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceE-EEeeeC--cEEEEEecCCcEEEEEcc
Q psy7482         227 SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIK-GLASHR--NHLICITSAGDLVVWELN  298 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~~~--~~l~~~~~dg~v~iw~~~  298 (327)
                      ..+.+..+    ++.++++++.|++|+|||+.+++++.++.+|...+. .++|+|  ++|++|+.|++|+|||+.
T Consensus       286 ~~~lsg~~----sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~  356 (356)
T 2w18_A          286 GRFLEGDV----KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS  356 (356)
T ss_dssp             CCEEEEEE----ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred             ceeEcccc----CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence            55443333    478899999999999999999999999999987665 589999  899999999999999963

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=100.00  E-value=4.3e-32  Score=228.45  Aligned_cols=293  Identities=11%  Similarity=0.079  Sum_probs=222.0

Q ss_pred             ccEEEEEe---CCCEEEEec----CCC----eEEEEEc--cccccc--cccccccccEEEEEECC--------------C
Q psy7482          15 ASVRSVAA---TSKLAASSG----ADE----TVVLYDM--VKRKQS--GALMQHEGTITCLKFTP--------------E   65 (327)
Q Consensus        15 ~~v~~~~~---~~~~l~~~~----~dg----~v~~w~~--~~~~~~--~~~~~~~~~v~~~~~~~--------------~   65 (327)
                      ..+....|   ..+++++|+    .||    .++|||+  .+++.+  ..+.+|...+..+++++              .
T Consensus        63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~  142 (415)
T 2hqs_A           63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF  142 (415)
T ss_dssp             GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred             cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence            35555666   345677776    567    8999999  888876  45778888887777664              1


Q ss_pred             CCeEEEecCC------CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC---CEEEEEcCCCceeeee
Q psy7482          66 GSHLISCSDD------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK---TLRTWNLVKGRSAYIT  136 (327)
Q Consensus        66 ~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~  136 (327)
                      +..++.++.+      +.|++||+.. .....+ ..|... +.+++|+|+|+.|++++.++   .|++||+++++.....
T Consensus       143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l-~~~~~~-v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~  219 (415)
T 2hqs_A          143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVV-HRSPQP-LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA  219 (415)
T ss_dssp             TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEE-EEESSC-EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCccceEEEEcCCC-CCCEEE-eCCCCc-ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee
Confidence            5566665554      7999999975 445556 567766 99999999999999999875   9999999988765433


Q ss_pred             eccccCccccceEEEEEccCCcEEE-eec-C--CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCC-CC--cE
Q psy7482         137 NLSSYGVGFENLDSVVWSPEGLLYA-IPI-Q--NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNE-ES--AI  208 (327)
Q Consensus       137 ~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-~--~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~-d~--~i  208 (327)
                      ...      ..+.+++|+|+|+.|+ +++ +  ..|++||+.+++......+...+.+++|+|| ..|++++. ++  .|
T Consensus       220 ~~~------~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i  293 (415)
T 2hqs_A          220 SFP------RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV  293 (415)
T ss_dssp             CCS------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred             cCC------CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEE
Confidence            222      2489999999999877 444 4  4599999998877544447788999999999 56776665 44  67


Q ss_pred             EEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC---CeEEEEEcCCCceeEEeecccCceEEEeeeC--cEE
Q psy7482         209 TAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE---SAITAYNLTDGSHLWHIKASASRIKGLASHR--NHL  283 (327)
Q Consensus       209 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l  283 (327)
                      ++||+.+++. ..+..+...+..++|  +|+|++|++++.+   ..|++||+.+++.. .+..+. .+.+++|+|  ++|
T Consensus       294 ~~~d~~~~~~-~~l~~~~~~~~~~~~--spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l  368 (415)
T 2hqs_A          294 YKVNINGGAP-QRITWEGSQNQDADV--SSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMV  368 (415)
T ss_dssp             EEEETTSSCC-EECCCSSSEEEEEEE--CTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEE
T ss_pred             EEEECCCCCE-EEEecCCCcccCeEE--CCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEE
Confidence            7889887764 445556778889999  5999999988764   58999999988764 455554 899999999  788


Q ss_pred             EEEecCC---cEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         284 ICITSAG---DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       284 ~~~~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ++++.++   .|++||+...   ....+  ..+...|.+++|+|..
T Consensus       369 ~~~s~~~~~~~l~~~d~~g~---~~~~l--~~~~~~v~~~~~~~~~  409 (415)
T 2hqs_A          369 IYSSSQGMGSVLNLVSTDGR---FKARL--PATDGQVKFPAWSPYL  409 (415)
T ss_dssp             EEEEEETTEEEEEEEETTSC---CEEEC--CCSSSEEEEEEECCCC
T ss_pred             EEEEcCCCccEEEEEECCCC---cEEEe--eCCCCCCcCCcccccc
Confidence            8888777   7999999765   33333  3466789999999975

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=100.00  E-value=7.1e-31  Score=227.50  Aligned_cols=298  Identities=10%  Similarity=0.073  Sum_probs=234.9

Q ss_pred             EEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc--CCCeEEEeEEeccc
Q psy7482          20 VAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV--GSWQLEKLFKKAHK   97 (327)
Q Consensus        20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~--~~~~~~~~~~~~~~   97 (327)
                      +..++.++++++.|++|.+||..+++++.++..+.. +..++|+|+|++|++++.|+.|.+||+  .+++.+..+ . +.
T Consensus       145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i-~-~g  221 (543)
T 1nir_A          145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI-K-IG  221 (543)
T ss_dssp             CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE-E-CC
T ss_pred             cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE-e-cC
Confidence            334788899999999999999999999988884333 889999999999999999999999999  888888887 3 23


Q ss_pred             CCceeeEEEec----CCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccC-----cc-ccceEEEEEccCCcEEEee-c-
Q psy7482          98 GTAVNHISIHP----SGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYG-----VG-FENLDSVVWSPEGLLYAIP-I-  164 (327)
Q Consensus        98 ~~~v~~~~~~~----~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~-----~~-~~~v~~~~~~~~~~~l~~~-~-  164 (327)
                      .. +..++|+|    +|+++++++. +++|.+||..+++.+..+......     .+ ...+..+.++|++..++++ . 
T Consensus       222 ~~-p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~  300 (543)
T 1nir_A          222 IE-ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE  300 (543)
T ss_dssp             SE-EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred             CC-cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence            33 89999999    9999999885 899999999999888776653210     01 1248899999988766555 3 


Q ss_pred             CCeEEEEEecCCceee--EecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCceeEEeee----cccceEEEEEEe
Q psy7482         165 QNKAVVFSVEKAGVLQ--TLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGSHLWQIKA----SASRIKGLVFFS  236 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~--~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~  236 (327)
                      ++.|.+||..+.+.+.  .+.+...+..+.|+|+ ++++ ++..+++|.+||..+++.+..+..    |.+....  |. 
T Consensus       301 ~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~--~~-  377 (543)
T 1nir_A          301 TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN--FV-  377 (543)
T ss_dssp             TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEE--EE-
T ss_pred             CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcc--cC-
Confidence            8999999998876554  5556777889999999 5554 455789999999999998888764    5433333  32 


Q ss_pred             cCC-CcEEEEec-CCCeEEEEEcCC-------CceeEEeecccCceEEEeeeC--cEEEEEe-------cCCcEEEEEcc
Q psy7482         237 IPQ-ETTVCTGN-EESAITAYNLTD-------GSHLWHIKASASRIKGLASHR--NHLICIT-------SAGDLVVWELN  298 (327)
Q Consensus       237 s~~-~~~l~~~~-~d~~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-------~dg~v~iw~~~  298 (327)
                      +|+ +..++++. .|++|.+||+.+       .+.+.++..|...+..++++|  ++|++++       .+++|.+||+.
T Consensus       378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~  457 (543)
T 1nir_A          378 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK  457 (543)
T ss_dssp             ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred             CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence            276 66677765 689999999988       889999999988899999999  8888887       37899999999


Q ss_pred             CccCCCc-eeeee------cCCCCceEEEEeCCCC
Q psy7482         299 EDVTREP-QRVSA------TNDGCRFTCLAIRPPV  326 (327)
Q Consensus       299 ~~~~~~~-~~~~~------~~~~~~i~~l~~~p~~  326 (327)
                      +..  .. ..+..      ..++.++..++|+|+.
T Consensus       458 ~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g  490 (543)
T 1nir_A          458 NLD--AKYQVLPIAEWADLGEGAKRVVQPEYNKRG  490 (543)
T ss_dssp             CTT--SCCEEECHHHHHCCCSSCCEEEEEEECSSS
T ss_pred             CCC--CCeEEeechhhcccCCCCCceEeccCCCCC
Confidence            884  22 22211      2446789999999873

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=100.00  E-value=1.3e-30  Score=206.96  Aligned_cols=242  Identities=10%  Similarity=0.077  Sum_probs=168.8

Q ss_pred             EeeeeccCCccEEEEEe---CCCEEEEecCC-CeEEEEEc--ccc----ccccccccccccEEEEEECCCCCeEEEec--
Q psy7482           6 QTFVTHSHTASVRSVAA---TSKLAASSGAD-ETVVLYDM--VKR----KQSGALMQHEGTITCLKFTPEGSHLISCS--   73 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~---~~~~l~~~~~d-g~v~~w~~--~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--   73 (327)
                      +.+..++|+.+|..+.+   ..+++..+-.+ ..-.++-+  ...    .....-.+|...|..+   ++++++.+++  
T Consensus        78 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g  154 (356)
T 2w18_A           78 KLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTL  154 (356)
T ss_dssp             EEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSS
T ss_pred             eeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccC
Confidence            34444589999999998   22333322211 11111111  111    1111112344445544   5666666643  


Q ss_pred             CCCcEEEEEc-CCCeEEEeEEecccCCceeeEEEec---CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          74 DDGSIAIFRV-GSWQLEKLFKKAHKGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        74 ~d~~i~iw~~-~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      .|+.|++|++ .+++.+..+ ..|... +..++|++   ++.+|++++.|++|++||+++++.+..+.....  +...+.
T Consensus       155 ~d~~V~~~~~s~dG~~~~s~-~~~~~~-v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~--~v~~v~  230 (356)
T 2w18_A          155 SDQQVEVMTFAEDGGGKENQ-FLMPPE-ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS--YQASVC  230 (356)
T ss_dssp             TTCEEEEEEECTTSCEEEEE-EECCCS-SCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----CCCE
T ss_pred             CCCcEEEEEECCCCceeeee-ccCCCc-eeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc--ceeeeE
Confidence            6999999999 558877777 678777 99999999   779999999999999999999998877653221  123488


Q ss_pred             EEEEccCCcEEE------------eec-CCeEEEEEecCCceeeEec------CCCceeEEEeecCceEEEeCCCCcEEE
Q psy7482         150 SVVWSPEGLLYA------------IPI-QNKAVVFSVEKAGVLQTLK------SESKVHSVCFLNETTVCTGNEESAITA  210 (327)
Q Consensus       150 ~~~~~~~~~~l~------------~~~-~~~i~i~d~~~~~~~~~~~------~~~~i~~~~~~~~~~l~~~~~d~~i~i  210 (327)
                      +++|+|++++++            +|+ |+++++||..+++.+..+.      |...+.+..++ ...+++++.|++|++
T Consensus       231 ~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s-g~~lASgS~DgTIkI  309 (356)
T 2w18_A          231 HKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK-DHCAAAILTSGTIAI  309 (356)
T ss_dssp             EEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE-TTEEEEEETTSCEEE
T ss_pred             EEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC-CCEEEEEcCCCcEEE
Confidence            889999998763            455 8999999999998876652      33334433333 367899999999999


Q ss_pred             EEcCCCceeEEeeecccceE-EEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         211 YNLTDGSHLWQIKASASRIK-GLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       211 ~d~~~~~~~~~~~~~~~~v~-~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      ||+.+++.+.++++|...+. .++|  +|+|++|++|+.|++|+|||+
T Consensus       310 WDl~tGk~l~tL~gH~~~vvs~vaf--SPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          310 WDLLLGQCTALLPPVSDQHWSFVKW--SGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             EETTTCSEEEEECCC--CCCCEEEE--CSSSSEEEEECTTSCEEEEEE
T ss_pred             EECCCCcEEEEecCCCCCeEEEEEE--CCCCCEEEEEECCCcEEEecC
Confidence            99999999999999987665 5889  499999999999999999995

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=100.00  E-value=2.6e-30  Score=217.65  Aligned_cols=256  Identities=12%  Similarity=0.109  Sum_probs=200.5

Q ss_pred             eccCCccEEEEEeC----------------CCEEEEecCC------CeEEEEEccccccccccccccccEEEEEECCCCC
Q psy7482          10 THSHTASVRSVAAT----------------SKLAASSGAD------ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS   67 (327)
Q Consensus        10 ~~~h~~~v~~~~~~----------------~~~l~~~~~d------g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~   67 (327)
                      +.+|...+..+++.                +..++.++.+      +.|++||+. +.....+.+|...+.+++|+|+|+
T Consensus       113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~  191 (415)
T 2hqs_A          113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGS  191 (415)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSS
T ss_pred             EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCC
Confidence            45677666666552                6677766654      799999997 555677888999999999999999


Q ss_pred             eEEEecCCC---cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEE-EEeCCCC--EEEEEcCCCceeeeeecccc
Q psy7482          68 HLISCSDDG---SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLAL-SVGKDKT--LRTWNLVKGRSAYITNLSSY  141 (327)
Q Consensus        68 ~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~  141 (327)
                      +|++++.++   .|++||+.+++... + ..+... +.+++|+|+|+.|+ +++.++.  |++||+.+++.....   ..
T Consensus       192 ~la~~s~~~~~~~i~~~d~~tg~~~~-l-~~~~~~-~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~---~~  265 (415)
T 2hqs_A          192 KLAYVTFESGRSALVIQTLANGAVRQ-V-ASFPRH-NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT---DG  265 (415)
T ss_dssp             EEEEEECTTSSCEEEEEETTTCCEEE-E-ECCSSC-EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECC---CC
T ss_pred             EEEEEEecCCCcEEEEEECCCCcEEE-e-ecCCCc-ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCc---CC
Confidence            999998875   99999999887754 4 456666 99999999999887 6666655  999999887653222   11


Q ss_pred             CccccceEEEEEccCCcEEEeec--CC--eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCC---CcEEEEEc
Q psy7482         142 GVGFENLDSVVWSPEGLLYAIPI--QN--KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEE---SAITAYNL  213 (327)
Q Consensus       142 ~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d---~~i~i~d~  213 (327)
                         ...+.+++|+|+|+.|+.++  ++  .|++||+.+++......+...+.+++|+|+ .+|++++.+   ..|++||+
T Consensus       266 ---~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~  342 (415)
T 2hqs_A          266 ---RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL  342 (415)
T ss_dssp             ---SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred             ---CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence               23489999999999888776  34  788889988775443346678899999999 667766653   58999999


Q ss_pred             CCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC---eEEEEEcCCCceeEEeecccCceEEEeeeC
Q psy7482         214 TDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES---AITAYNLTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       214 ~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                      .+++. ..+..+. .+.+++|  +|+|++|++++.++   .|++||+. +.....+..|.+.|.+++|+|
T Consensus       343 ~~~~~-~~l~~~~-~~~~~~~--spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~  407 (415)
T 2hqs_A          343 ATGGV-QVLSSTF-LDETPSL--APNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSP  407 (415)
T ss_dssp             TTCCE-EECCCSS-SCEEEEE--CTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECC
T ss_pred             CCCCE-EEecCCC-CcCCeEE--cCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccc
Confidence            98876 3455554 7899999  49999999888776   79999986 566788899999999999999

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.98  E-value=1.4e-28  Score=213.15  Aligned_cols=276  Identities=10%  Similarity=0.095  Sum_probs=218.1

Q ss_pred             EEEEEe--CCCEEEEecCCCeEEEEEc--cccccccccccccccEEEEEECC----CCCeEEEecC-CCcEEEEEcCCCe
Q psy7482          17 VRSVAA--TSKLAASSGADETVVLYDM--VKRKQSGALMQHEGTITCLKFTP----EGSHLISCSD-DGSIAIFRVGSWQ   87 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~~dg~v~~w~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~i~iw~~~~~~   87 (327)
                      +.+++|  ++++|++++.|++|++||+  .+++.+.++. +...+..++|+|    +|++|++++. +++|.+||..+++
T Consensus       181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~  259 (543)
T 1nir_A          181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE  259 (543)
T ss_dssp             EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred             cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence            778888  9999999999999999999  8888888887 455689999999    9999999885 8999999999999


Q ss_pred             EEEeEEec---------ccCCceeeEEEecCCCE-EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          88 LEKLFKKA---------HKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        88 ~~~~~~~~---------~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      ++..+...         |....+..+.++|++.. +++...++.|.+||..+.+.+.......    ...+..+.|+|++
T Consensus       260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~----~~~~~~~~~spdg  335 (543)
T 1nir_A          260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA----APFLHDGGWDSSH  335 (543)
T ss_dssp             EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC----CSSCCCEEECTTS
T ss_pred             cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEecc----CcCccCceECCCC
Confidence            98887321         23324889999997654 5566678999999998876544222221    1237889999999


Q ss_pred             cEEEeec--CCeEEEEEecCCceeeEec-----CCCceeEEEeecC-ce-EEEeC-CCCcEEEEEcCC-------CceeE
Q psy7482         158 LLYAIPI--QNKAVVFSVEKAGVLQTLK-----SESKVHSVCFLNE-TT-VCTGN-EESAITAYNLTD-------GSHLW  220 (327)
Q Consensus       158 ~~l~~~~--~~~i~i~d~~~~~~~~~~~-----~~~~i~~~~~~~~-~~-l~~~~-~d~~i~i~d~~~-------~~~~~  220 (327)
                      ++++++.  +++|.+||..+++.+..+.     |.+....+ ++|+ +. ++++. .|++|.+||+.+       .+.++
T Consensus       336 ~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~  414 (543)
T 1nir_A          336 RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVA  414 (543)
T ss_dssp             CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred             CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEE
Confidence            9776553  7899999999999888776     33333333 4676 44 55554 689999999988       88999


Q ss_pred             EeeecccceEEEEEEecCCCcEEEEec-------CCCeEEEEEcCCCcee-EEe--------ecccCceEEEeeeC--cE
Q psy7482         221 QIKASASRIKGLVFFSIPQETTVCTGN-------EESAITAYNLTDGSHL-WHI--------KASASRIKGLASHR--NH  282 (327)
Q Consensus       221 ~~~~~~~~v~~~~~~~s~~~~~l~~~~-------~d~~i~i~d~~~~~~~-~~~--------~~~~~~v~~~~~~~--~~  282 (327)
                      ++..|...+..++++  |++++|++++       .+++|.+||+.+++.. ..+        ..+...+..++|+|  +.
T Consensus       415 ~l~~~g~~~~~v~~~--pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~  492 (543)
T 1nir_A          415 ELQGQGGGSLFIKTH--PKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDE  492 (543)
T ss_dssp             EEECSCSCCCCEECC--TTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSE
T ss_pred             EEEcCCCCceEEEcC--CCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCE
Confidence            999998888899995  9999999987       2679999999999876 443        34567899999999  66


Q ss_pred             EEEEe-----cCCcEEEEEccCc
Q psy7482         283 LICIT-----SAGDLVVWELNED  300 (327)
Q Consensus       283 l~~~~-----~dg~v~iw~~~~~  300 (327)
                      ++.+.     .|+.|.|||..+.
T Consensus       493 ~~~s~~~~~~~~~~i~v~D~~t~  515 (543)
T 1nir_A          493 VWFSVWNGKNDSSALVVVDDKTL  515 (543)
T ss_dssp             EEEEEECCTTSCCEEEEEETTTT
T ss_pred             EEEEeecCCCCCCeEEEEECCCc
Confidence            55542     4799999999998

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.97  E-value=1.2e-28  Score=202.61  Aligned_cols=286  Identities=13%  Similarity=0.203  Sum_probs=198.9

Q ss_pred             EEEEecCCCeEEEEEcc-cc--ccccccccccccEEEEEECCCCCeEEEecCC-CcEEEEEcC--CCeEE--EeEEeccc
Q psy7482          26 LAASSGADETVVLYDMV-KR--KQSGALMQHEGTITCLKFTPEGSHLISCSDD-GSIAIFRVG--SWQLE--KLFKKAHK   97 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iw~~~--~~~~~--~~~~~~~~   97 (327)
                      ++++++.|+.|++||+. ++  +.+..+ .+...+.+++|+|++++|++++.+ +.|.+|++.  +++..  ..+ .. .
T Consensus         7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~-~   83 (343)
T 1ri6_A            7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES-AL-P   83 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE-EC-S
T ss_pred             EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc-cc-C
Confidence            45555789999999985 23  223333 467789999999999988888876 999999997  55433  333 22 2


Q ss_pred             CCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCC---ceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEE
Q psy7482          98 GTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKG---RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVF  171 (327)
Q Consensus        98 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~  171 (327)
                      .. +..++|+|+++++++++. ++.|.+||+..+   +........      ..+.+++|+|+++.++++.  ++.|.+|
T Consensus        84 ~~-~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~s~dg~~l~~~~~~~~~v~~~  156 (343)
T 1ri6_A           84 GS-LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL------DGCHSANISPDNRTLWVPALKQDRICLF  156 (343)
T ss_dssp             SC-CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC------TTBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred             CC-CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC------CCceEEEECCCCCEEEEecCCCCEEEEE
Confidence            34 899999999998877765 788999999533   222222221      2388899999998776664  8999999


Q ss_pred             EecC-Cceee----Eec--CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCC--Cce--eEEee---ec---ccceEEE
Q psy7482         172 SVEK-AGVLQ----TLK--SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTD--GSH--LWQIK---AS---ASRIKGL  232 (327)
Q Consensus       172 d~~~-~~~~~----~~~--~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~--~~~--~~~~~---~~---~~~v~~~  232 (327)
                      |+.+ ++...    .+.  ....+..++|+|+ .++ +++..++.+.+|++..  ++.  ...+.   ..   ...+..+
T Consensus       157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  236 (343)
T 1ri6_A          157 TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI  236 (343)
T ss_dssp             EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred             EecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence            9987 65432    222  4457889999999 545 4556899999999953  332  22222   11   2245678


Q ss_pred             EEEecCCCcEEE-EecCCCeEEEEEcC--C--CceeEEeecccCceEEEeeeC--cEEEEEe-cCCcEEEEEccCccCCC
Q psy7482         233 VFFSIPQETTVC-TGNEESAITAYNLT--D--GSHLWHIKASASRIKGLASHR--NHLICIT-SAGDLVVWELNEDVTRE  304 (327)
Q Consensus       233 ~~~~s~~~~~l~-~~~~d~~i~i~d~~--~--~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-~dg~v~iw~~~~~~~~~  304 (327)
                      +|  +|++++|+ ++..++.|.+||+.  +  .+.+..+..+.. +.+++|+|  ++|++++ .++.|.+|+++... ..
T Consensus       237 ~~--s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~-g~  312 (343)
T 1ri6_A          237 HI--TPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ-GL  312 (343)
T ss_dssp             EE--CTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTT-TE
T ss_pred             EE--CCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCC-ce
Confidence            88  48998777 55578999999998  2  334555555554 88999999  6677776 68999999776431 03


Q ss_pred             ceeeeecCCCCceEEEEeCCC
Q psy7482         305 PQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       305 ~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ...+.....+....+++|.|+
T Consensus       313 ~~~~~~~~~g~~p~~i~~~~~  333 (343)
T 1ri6_A          313 LHEKGRYAVGQGPMWVVVNAH  333 (343)
T ss_dssp             EEEEEEEECSSSCCEEEEEEE
T ss_pred             eeEccccccCCCCeeEEEEcc
Confidence            344444445566888888875

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.97  E-value=4.9e-28  Score=198.10  Aligned_cols=266  Identities=11%  Similarity=0.134  Sum_probs=199.4

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC-CCcEEEEEcCCCeE-EEeEEecccCCc
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQL-EKLFKKAHKGTA  100 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~-~~~~~~~~~~~~  100 (327)
                      .+..+++++.++.|++||+.+++....+..+...+ .++|+|+++++++++. ++.|.+||..+++. ...+ ..+... 
T Consensus         9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~-   85 (331)
T 3u4y_A            9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI-QEGQSS-   85 (331)
T ss_dssp             CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE-EECSSC-
T ss_pred             CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec-ccCCCC-
Confidence            34457788899999999999998888777666667 9999999997766655 88999999999887 5555 444433 


Q ss_pred             eeeEEEecCCCEEEEEeCCC---CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c-CCe-EEEEEec
Q psy7482         101 VNHISIHPSGKLALSVGKDK---TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-QNK-AVVFSVE  174 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~-i~i~d~~  174 (327)
                      ..+++|+|++++++++..++   .|.+||+.+++....+.....      ..+++|+|+++.++++ . ++. +.+|++.
T Consensus        86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~------~~~~~~spdg~~l~~~~~~~~~~i~~~~~~  159 (331)
T 3u4y_A           86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD------AVGIAISPNGNGLILIDRSSANTVRRFKID  159 (331)
T ss_dssp             CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT------EEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred             ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC------ccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence            44499999999999555543   899999999887766554433      7899999999855554 3 577 9999987


Q ss_pred             CCcee-----eEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCce---eEEeeecccceEEEEEEecCCCcEEE
Q psy7482         175 KAGVL-----QTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSH---LWQIKASASRIKGLVFFSIPQETTVC  244 (327)
Q Consensus       175 ~~~~~-----~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~s~~~~~l~  244 (327)
                      ....+     ..+.....+..++|+|+ ++ ++++..++.|.+||+.+++.   +..+..+ ..+..++|  +|+|++++
T Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~--spdg~~l~  236 (331)
T 3u4y_A          160 ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVV--SRDGSTVY  236 (331)
T ss_dssp             TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEE--CTTSSEEE
T ss_pred             CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEE--CCCCCEEE
Confidence            54432     23345567899999999 43 45566789999999999887   7777644 55788999  49999776


Q ss_pred             Eec-CCCeEEEEEcCCCce--eEEeecc----cCc---eEEEeeeC--cEEEE-EecCCcEEEEEccCc
Q psy7482         245 TGN-EESAITAYNLTDGSH--LWHIKAS----ASR---IKGLASHR--NHLIC-ITSAGDLVVWELNED  300 (327)
Q Consensus       245 ~~~-~d~~i~i~d~~~~~~--~~~~~~~----~~~---v~~~~~~~--~~l~~-~~~dg~v~iw~~~~~  300 (327)
                      +++ .++.|.+||+.+++.  +..+..+    ..+   ...++|+|  ++|++ +..++.|.+||+...
T Consensus       237 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~  305 (331)
T 3u4y_A          237 VLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK  305 (331)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred             EEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence            554 578899999998876  4443322    222   24589999  55654 455678999999876

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.97  E-value=3.7e-29  Score=226.18  Aligned_cols=301  Identities=12%  Similarity=0.153  Sum_probs=222.9

Q ss_pred             CccEEEEEe--CCCEEEEecC-CC-----eEEEEEcccccccccccccc------------------------ccEEEEE
Q psy7482          14 TASVRSVAA--TSKLAASSGA-DE-----TVVLYDMVKRKQSGALMQHE------------------------GTITCLK   61 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~-dg-----~v~~w~~~~~~~~~~~~~~~------------------------~~v~~~~   61 (327)
                      ...+.+++|  ||++|++++. |+     .|++||+.+++....+..+.                        ..+.+++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            456889999  9999999988 88     89999999988766555443                        2378999


Q ss_pred             ECCCCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc
Q psy7482          62 FTPEGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS  139 (327)
Q Consensus        62 ~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  139 (327)
                      |+|||++|++++. +.|++||+.+++  ....+ ..+... +..++|+|||++|++++. +.|++||+.+++........
T Consensus       116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l-~~~~~~-~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~  191 (741)
T 2ecf_A          116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQL-THGEGF-ATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADG  191 (741)
T ss_dssp             ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBC-CCSSSC-EEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCC
T ss_pred             ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEc-ccCCcc-cccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCC
Confidence            9999999998886 899999999872  33344 455555 999999999999998874 68999999887665433221


Q ss_pred             ccCc-----------cccceEEEEEccCCcEEEeec-CC---------------------------------eEEEEEec
Q psy7482         140 SYGV-----------GFENLDSVVWSPEGLLYAIPI-QN---------------------------------KAVVFSVE  174 (327)
Q Consensus       140 ~~~~-----------~~~~v~~~~~~~~~~~l~~~~-~~---------------------------------~i~i~d~~  174 (327)
                      ....           ....+..++|+|||+.|+++. ++                                 .|.+||+.
T Consensus       192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~  271 (741)
T 2ecf_A          192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA  271 (741)
T ss_dssp             CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred             ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence            1100           001147899999999888875 44                                 78899998


Q ss_pred             C-CceeeEe---cCCCceeEEEeecC-ceEEEeC-----CCCcEEEEEcCCCceeEEeeeccc----ceEEEEEEecCCC
Q psy7482         175 K-AGVLQTL---KSESKVHSVCFLNE-TTVCTGN-----EESAITAYNLTDGSHLWQIKASAS----RIKGLVFFSIPQE  240 (327)
Q Consensus       175 ~-~~~~~~~---~~~~~i~~~~~~~~-~~l~~~~-----~d~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~s~~~  240 (327)
                      + ++.....   .+...+..++| || ..|++++     .+..|++||+.+++....+..+..    .+..++|  +|+|
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~--spdg  348 (741)
T 2ecf_A          272 EQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF--LDDG  348 (741)
T ss_dssp             TTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE--CTTS
T ss_pred             CCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE--CCCC
Confidence            8 7755443   25567899999 99 6666543     367899999999987776665543    3467888  4999


Q ss_pred             cEEEEecCCCeEEEEEcC-CCceeEEeecccCceEEE-eeeC--cEE-EEEecCC--cEEEEEccCccCCCceeeeecCC
Q psy7482         241 TTVCTGNEESAITAYNLT-DGSHLWHIKASASRIKGL-ASHR--NHL-ICITSAG--DLVVWELNEDVTREPQRVSATND  313 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~-~~~~--~~l-~~~~~dg--~v~iw~~~~~~~~~~~~~~~~~~  313 (327)
                      +++++++.|+.++||.+. ++. ...+..+...+..+ .|+|  +.| ++++.++  .+++|++.... .....+..   
T Consensus       349 ~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g-~~~~~l~~---  423 (741)
T 2ecf_A          349 SILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG-GQPQRLSK---  423 (741)
T ss_dssp             CEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC-CCCEECCC---
T ss_pred             eEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC-CCeeeccc---
Confidence            999999999988888765 445 77788888888887 5999  545 5566666  89999997532 12333332   


Q ss_pred             CCceEEEEeCCCC
Q psy7482         314 GCRFTCLAIRPPV  326 (327)
Q Consensus       314 ~~~i~~l~~~p~~  326 (327)
                      ...+.+++|+|+.
T Consensus       424 ~~~~~~~~~spdg  436 (741)
T 2ecf_A          424 APGMHSASFARNA  436 (741)
T ss_dssp             SCSEEEEEECTTS
T ss_pred             CCCceEEEECCCC
Confidence            4457899999873

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.97  E-value=5.4e-28  Score=198.17  Aligned_cols=263  Identities=9%  Similarity=0.092  Sum_probs=204.8

Q ss_pred             CEEEEecCCCeEEEEEccccccccccccccc--cEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecc----c
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGALMQHEG--TITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAH----K   97 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~----~   97 (327)
                      +++++++.++.|++||+.+++.+..+.....  .+..++|+|+++.+ +++..++.|.+||+.+++....+...+    .
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~   81 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence            5789999999999999999988877763221  47889999999766 456668899999999998887773333    1


Q ss_pred             CCceeeEEEecCCCEEEEEe------------CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482          98 GTAVNHISIHPSGKLALSVG------------KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ  165 (327)
Q Consensus        98 ~~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  165 (327)
                      .. +..++|+|++++++++.            .++.|.+||+.+++....+.....      +..++|+|+++.++++ +
T Consensus        82 ~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~-~  153 (337)
T 1pby_B           82 KS-LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ------ITMLAWARDGSKLYGL-G  153 (337)
T ss_dssp             EC-TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS------CCCEEECTTSSCEEEE-S
T ss_pred             cc-ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC------cceeEECCCCCEEEEe-C
Confidence            13 78899999999998886            579999999998877666554332      7789999999988777 7


Q ss_pred             CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeC-CCC-----------------------cEEEEEcCCCcee-
Q psy7482         166 NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGN-EES-----------------------AITAYNLTDGSHL-  219 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~-~d~-----------------------~i~i~d~~~~~~~-  219 (327)
                      +.|.+||+.+++....+........+.|+|+ ..++..+ .++                       .|.+||+.+++.. 
T Consensus       154 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~  233 (337)
T 1pby_B          154 RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM  233 (337)
T ss_dssp             SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred             CeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceE
Confidence            8999999999988877763321123377887 4444333 333                       4689999988764 


Q ss_pred             EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482         220 WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWEL  297 (327)
Q Consensus       220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~  297 (327)
                      ..+..+...+..++|  +|++++++++  ++.|.+||+.+++.+..+..+ ..+.+++|+|  ++|++++.++.|++||+
T Consensus       234 ~~~~~~~~~~~~~~~--s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~  308 (337)
T 1pby_B          234 REVRIMDVFYFSTAV--NPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDA  308 (337)
T ss_dssp             EEEEECSSCEEEEEE--CTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred             eecCCCCCceeeEEE--CCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence            223455567788999  4999999988  799999999999888777654 4678999999  77888889999999999


Q ss_pred             cCc
Q psy7482         298 NED  300 (327)
Q Consensus       298 ~~~  300 (327)
                      .+.
T Consensus       309 ~~~  311 (337)
T 1pby_B          309 ETL  311 (337)
T ss_dssp             TTC
T ss_pred             cCC
Confidence            887

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.97  E-value=7.5e-28  Score=193.52  Aligned_cols=250  Identities=14%  Similarity=0.166  Sum_probs=189.7

Q ss_pred             EecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC-CeEEEeEEecccCCceeeEEEe
Q psy7482          29 SSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-WQLEKLFKKAHKGTAVNHISIH  107 (327)
Q Consensus        29 ~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~v~~~~~~  107 (327)
                      .++.|+.|++||+.+++.. .+..|...|.+++|+|++++|++++ ++.|++||+.+ ++..... ..+....+.+++|+
T Consensus        17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~s   93 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVD-TGFATICNNDHGIS   93 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECC-CTTCCCBCSCCEEC
T ss_pred             CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEec-cccccccccceEEC
Confidence            4567899999999888765 4556889999999999999999887 78999999998 7776655 45543348999999


Q ss_pred             cCCCEEEEEe--CCCCEEEEEc--CCCceeeeeeccccCccccceEEEEEccCCcEEE-eec-CCeEEEEEec--CCcee
Q psy7482         108 PSGKLALSVG--KDKTLRTWNL--VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA-IPI-QNKAVVFSVE--KAGVL  179 (327)
Q Consensus       108 ~~~~~l~~~~--~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-~~~i~i~d~~--~~~~~  179 (327)
                      |++++|++++  .++...+|.+  .+++. ..+....      .+..++|+|+++.++ ++. ++.+.+|++.  +++..
T Consensus        94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~------~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~  166 (297)
T 2ojh_A           94 PDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKNL------PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET  166 (297)
T ss_dssp             TTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSSS------SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred             CCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecCC------CccceEECCCCCEEEEEECCCCceEEEEEECCCCcce
Confidence            9999999998  3355666654  44432 2221111      288899999999877 444 8888898864  34443


Q ss_pred             eEecCCCceeEEEeecC-ceEEEe-CCCCcEEEEEcC-CCceeEEeeecccceEEEEEEecCCCcEEEEecCC-------
Q psy7482         180 QTLKSESKVHSVCFLNE-TTVCTG-NEESAITAYNLT-DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE-------  249 (327)
Q Consensus       180 ~~~~~~~~i~~~~~~~~-~~l~~~-~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d-------  249 (327)
                      ....+...+.+++|+|+ ..++++ ..++.+++|++. .+..+..+..|...+..++|  +|++++|++++.+       
T Consensus       167 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~~~~  244 (297)
T 2ojh_A          167 RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHP--SPSGDKVVFVSYDADVFDHP  244 (297)
T ss_dssp             ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEE--CTTSSEEEEEEEETTCCSCC
T ss_pred             EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEE--CCCCCEEEEEEcCCCCCccc
Confidence            33347788999999999 555554 468999999986 55667777778888999999  4999999888765       


Q ss_pred             ----CeEEEEEcCCCce--eEEeecccCceEEEeeeC--cEEEEEecCC
Q psy7482         250 ----SAITAYNLTDGSH--LWHIKASASRIKGLASHR--NHLICITSAG  290 (327)
Q Consensus       250 ----~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~--~~l~~~~~dg  290 (327)
                          +.|++||+.+++.  +..+.+|...+..++|+|  +.|++++.+.
T Consensus       245 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          245 RDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             SSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred             ccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence                5699999988865  445557888999999999  7777777653

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.96  E-value=8e-28  Score=216.91  Aligned_cols=305  Identities=12%  Similarity=0.117  Sum_probs=212.7

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccc---cEEEEEECCCCCeEEEecCC---------CcEEE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPEGSHLISCSDD---------GSIAI   80 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------~~i~i   80 (327)
                      ..+.+++|  +|+++++ +.||+|++||+.+++....+..|..   .|.+++|+|||++|++++.+         +.+.+
T Consensus        17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~   95 (723)
T 1xfd_A           17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL   95 (723)
T ss_dssp             CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred             ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence            34667788  8887776 6899999999999988777776664   49999999999999998764         78889


Q ss_pred             EEcCCCeEEEeEEe--cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCc----c---------c
Q psy7482          81 FRVGSWQLEKLFKK--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV----G---------F  145 (327)
Q Consensus        81 w~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~---------~  145 (327)
                      ||+.+++. ..+..  .+... +..++|+|||+.|+.++. +.|++||+.+++............    .         .
T Consensus        96 ~d~~~~~~-~~l~~~~~~~~~-~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~  172 (723)
T 1xfd_A           96 SKIPHGDP-QSLDPPEVSNAK-LQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL  172 (723)
T ss_dssp             EESSSCCC-EECCCTTCCSCC-CSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred             EECCCCce-EeccCCcccccc-ccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence            99998876 33311  22233 788999999999999886 789999999887655443322110    0         0


Q ss_pred             cceEEEEEccCCcEEEeec-CC----------------------------------eEEEEEecCCceeeEec-C-----
Q psy7482         146 ENLDSVVWSPEGLLYAIPI-QN----------------------------------KAVVFSVEKAGVLQTLK-S-----  184 (327)
Q Consensus       146 ~~v~~~~~~~~~~~l~~~~-~~----------------------------------~i~i~d~~~~~~~~~~~-~-----  184 (327)
                      ..+.+++|+|||+.|+.+. ++                                  .|++||+.+++....+. +     
T Consensus       173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~  252 (723)
T 1xfd_A          173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM  252 (723)
T ss_dssp             SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred             cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence            1247899999999988875 32                                  79999999887655554 2     


Q ss_pred             -CCceeEEEeecCc-eEEEeC----CCCcEEEEEcCCCceeEEeeec-ccceE----EEEEEecCCCcEEEE--ecCCC-
Q psy7482         185 -ESKVHSVCFLNET-TVCTGN----EESAITAYNLTDGSHLWQIKAS-ASRIK----GLVFFSIPQETTVCT--GNEES-  250 (327)
Q Consensus       185 -~~~i~~~~~~~~~-~l~~~~----~d~~i~i~d~~~~~~~~~~~~~-~~~v~----~~~~~~s~~~~~l~~--~~~d~-  250 (327)
                       ...+..++|+||+ ++++..    .+..|++||+.+++....+..+ ...+.    .++|  +|+|+.|+.  +..++ 
T Consensus       253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~~  330 (723)
T 1xfd_A          253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVF--SKDGRKFFFIRAIPQGG  330 (723)
T ss_dssp             SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEE--CTTSCSEEEEEEECCSS
T ss_pred             ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceE--cCCCCeEEEEEecccCC
Confidence             4578899999995 454443    3467999999998876665443 33333    7788  499997775  45666 


Q ss_pred             -----eEEEEE-cCCCc--eeEEeecccCceEE-EeeeC--cEEEEEecC---CcEEEEEccCccCCCceeeee-cCCCC
Q psy7482         251 -----AITAYN-LTDGS--HLWHIKASASRIKG-LASHR--NHLICITSA---GDLVVWELNEDVTREPQRVSA-TNDGC  315 (327)
Q Consensus       251 -----~i~i~d-~~~~~--~~~~~~~~~~~v~~-~~~~~--~~l~~~~~d---g~v~iw~~~~~~~~~~~~~~~-~~~~~  315 (327)
                           .|.+|| ...++  +...+..+...+.. ++|+|  +.|+..+.+   +.+++|+++.........+.. ..+..
T Consensus       331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~  410 (723)
T 1xfd_A          331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENC  410 (723)
T ss_dssp             SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSC
T ss_pred             CcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCC
Confidence                 577777 34443  14555544444554 68999  677655544   789999997653112222221 11455


Q ss_pred             ceEEEEeCCC
Q psy7482         316 RFTCLAIRPP  325 (327)
Q Consensus       316 ~i~~l~~~p~  325 (327)
                      .+..++|+|+
T Consensus       411 ~~~~~~~spd  420 (723)
T 1xfd_A          411 TYFSASFSHS  420 (723)
T ss_dssp             CCCEEEECTT
T ss_pred             CeEEEEECCC
Confidence            6888999987

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.96  E-value=5.1e-26  Score=212.47  Aligned_cols=305  Identities=11%  Similarity=0.083  Sum_probs=224.5

Q ss_pred             eeccCCccEEEEEe--CCCEEEEecCC------CeEEEEEccccccccccccccccE-------EEEEECCCCCeEEEec
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSGAD------ETVVLYDMVKRKQSGALMQHEGTI-------TCLKFTPEGSHLISCS   73 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~~d------g~v~~w~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~   73 (327)
                      .+.+|...+.+++|  ||++||.++.+      ..|++||+.+++ ...+..|...+       ..++|+|||+.+++++
T Consensus        47 ~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~  125 (1045)
T 1k32_A           47 KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTD  125 (1045)
T ss_dssp             EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred             EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEEEC
Confidence            34479999999999  99999987543      479999998776 56677888888       9999999999777777


Q ss_pred             CC------CcEEEEEcCCCeEEEe-------------------------------------------------EEecccC
Q psy7482          74 DD------GSIAIFRVGSWQLEKL-------------------------------------------------FKKAHKG   98 (327)
Q Consensus        74 ~d------~~i~iw~~~~~~~~~~-------------------------------------------------~~~~~~~   98 (327)
                      .+      ..|..|++.+++....                                                 + ..|..
T Consensus       126 ~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l-~~~~~  204 (1045)
T 1k32_A          126 AMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI-VDMST  204 (1045)
T ss_dssp             TTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEE-ECCSS
T ss_pred             CcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEEC-cCCCC
Confidence            54      3588888766543211                                                 1 22334


Q ss_pred             CceeeEEEecCCCEEEEEeCCCCEEEEEcCC-Cceeeeeeccc---------c-------------------------Cc
Q psy7482          99 TAVNHISIHPSGKLALSVGKDKTLRTWNLVK-GRSAYITNLSS---------Y-------------------------GV  143 (327)
Q Consensus        99 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~---------~-------------------------~~  143 (327)
                      . +.++.|+++ .++++++.++.+.+|.+.. +.....+....         .                         ..
T Consensus       205 ~-v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~  282 (1045)
T 1k32_A          205 H-VSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEI  282 (1045)
T ss_dssp             C-CEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCC
T ss_pred             c-ccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeecc
Confidence            4 677778776 5666677778888887542 11111100000         0                         00


Q ss_pred             -----------cccceEEEEEc-cCCcEEEeecCCeEEEEEecCCceeeEecCCC-ceeEEEeecC-ceEEEeCCCCcEE
Q psy7482         144 -----------GFENLDSVVWS-PEGLLYAIPIQNKAVVFSVEKAGVLQTLKSES-KVHSVCFLNE-TTVCTGNEESAIT  209 (327)
Q Consensus       144 -----------~~~~v~~~~~~-~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~-~i~~~~~~~~-~~l~~~~~d~~i~  209 (327)
                                 +...+.+++|+ |+|+.++.+.++.+.+|+...++......+.. .+..++|+ + ..++.++.++.+.
T Consensus       283 ~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~  361 (1045)
T 1k32_A          283 GDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFL  361 (1045)
T ss_dssp             CCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEE
T ss_pred             CcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceE
Confidence                       11247788999 99988888888889999888776554333556 78899999 8 6677777788888


Q ss_pred             -EEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEE
Q psy7482         210 -AYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICI  286 (327)
Q Consensus       210 -i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~  286 (327)
                       +||+..++.. .+..|...+..++|  +|+|++|++++.++.|++||+.+++....+.+|...+.+++|+|  ++|+++
T Consensus       362 ~~~d~~~~~~~-~l~~~~~~~~~~~~--SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~  438 (1045)
T 1k32_A          362 GIYDYRTGKAE-KFEENLGNVFAMGV--DRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG  438 (1045)
T ss_dssp             EEEETTTCCEE-ECCCCCCSEEEEEE--CTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred             EEEECCCCCce-EecCCccceeeeEE--CCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEE
Confidence             8898876544 34477788999999  59999999999999999999999998888878999999999999  788888


Q ss_pred             ecCC----------cEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         287 TSAG----------DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       287 ~~dg----------~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +.++          .|++||+..+   .  ......+...+.+++|+|+.
T Consensus       439 ~~~~~~~~~~~~~~~i~l~d~~~g---~--~~~l~~~~~~~~~~~~spdG  483 (1045)
T 1k32_A          439 FPLKHGETDGYVMQAIHVYDMEGR---K--IFAATTENSHDYAPAFDADS  483 (1045)
T ss_dssp             EEECSSTTCSCCEEEEEEEETTTT---E--EEECSCSSSBEEEEEECTTS
T ss_pred             ecCccccccCCCCCeEEEEECCCC---c--EEEeeCCCcccCCceEcCCC
Confidence            7654          8999999887   2  22334456678889999873

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.96  E-value=2.2e-26  Score=206.99  Aligned_cols=291  Identities=11%  Similarity=0.152  Sum_probs=202.2

Q ss_pred             EEeCCCEEEEecCCCeEEEEEccccccc-ccccccc-----------------ccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482          20 VAATSKLAASSGADETVVLYDMVKRKQS-GALMQHE-----------------GTITCLKFTPEGSHLISCSDDGSIAIF   81 (327)
Q Consensus        20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~d~~i~iw   81 (327)
                      +.|.++.+++++.|+ | +||+.+++.+ ..+..|.                 ..|.+++|+|| +.++.+. ++.|++|
T Consensus        31 ~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~~~  106 (706)
T 2z3z_A           31 LQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLVGF  106 (706)
T ss_dssp             CEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEEEE
T ss_pred             CcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEEEE
Confidence            444366667777777 8 9999999873 4444333                 46999999999 6655553 5899999


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC-----CceeeeeeccccC---------ccccc
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK-----GRSAYITNLSSYG---------VGFEN  147 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~---------~~~~~  147 (327)
                      |+.+++.....  .+... +.+++|+|||+.|+++ .++.|++||+.+     ++...........         .+...
T Consensus       107 d~~~~~~~~l~--~~~~~-~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~  182 (706)
T 2z3z_A          107 DMLARKVTYLF--DTNEE-TASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGI  182 (706)
T ss_dssp             ETTTTEEEEEE--CCTTC-CTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTC
T ss_pred             ECCCCceEEcc--CCccc-ccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCC
Confidence            99988765543  34445 8899999999999985 679999999988     7654433222110         00112


Q ss_pred             eEEEEEccCCcEEEeec----------------------------------CCeEEEEEecCCceeeEe---cCCCceeE
Q psy7482         148 LDSVVWSPEGLLYAIPI----------------------------------QNKAVVFSVEKAGVLQTL---KSESKVHS  190 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~----------------------------------~~~i~i~d~~~~~~~~~~---~~~~~i~~  190 (327)
                      +.++.|+|||+.|+++.                                  +..|++||+.+++.....   .+...+..
T Consensus       183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~  262 (706)
T 2z3z_A          183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN  262 (706)
T ss_dssp             CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred             CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence            47899999999888874                                  257999999988765444   24567899


Q ss_pred             EEeecC-ceEEEeCCCC-----cEEEEEcCCCceeEEee-e-ccc---ceEEEEEEecC--CCcEEEEecCCCeEEEEEc
Q psy7482         191 VCFLNE-TTVCTGNEES-----AITAYNLTDGSHLWQIK-A-SAS---RIKGLVFFSIP--QETTVCTGNEESAITAYNL  257 (327)
Q Consensus       191 ~~~~~~-~~l~~~~~d~-----~i~i~d~~~~~~~~~~~-~-~~~---~v~~~~~~~s~--~~~~l~~~~~d~~i~i~d~  257 (327)
                      ++|+|| +.+++++.++     .|++||+.+++....+. . +..   .+..++|  +|  +|+++++++.|+.+++|++
T Consensus       263 ~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~--sp~~dg~~l~~~~~~g~~~l~~~  340 (706)
T 2z3z_A          263 LSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF--LPGSNNQFIWQSRRDGWNHLYLY  340 (706)
T ss_dssp             EEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE--CTTCSSEEEEEECTTSSCEEEEE
T ss_pred             EEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee--ecCCCCEEEEEEccCCccEEEEE
Confidence            999999 6677766665     89999999884443332 2 222   2356788  48  9999999999999999988


Q ss_pred             C-CCceeEEeecccCceEE-EeeeC--cEEE-EEecCC----cEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         258 T-DGSHLWHIKASASRIKG-LASHR--NHLI-CITSAG----DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       258 ~-~~~~~~~~~~~~~~v~~-~~~~~--~~l~-~~~~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      . ++..+..+..+...+.. ++|+|  +.|+ +++.++    .|..|++..+   ....+   .+...+.+++|+|+.
T Consensus       341 ~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~---~~~~l---~~~~~~~~~~~spdg  412 (706)
T 2z3z_A          341 DTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG---KTKDL---TPESGMHRTQLSPDG  412 (706)
T ss_dssp             ETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC---CCEES---CCSSSEEEEEECTTS
T ss_pred             ECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC---Cceec---cCCCceEEEEECCCC
Confidence            6 67777888888777877 79999  5554 444554    4555555554   23333   345568899999973

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.96  E-value=5.6e-25  Score=181.47  Aligned_cols=267  Identities=8%  Similarity=0.046  Sum_probs=205.1

Q ss_pred             CCccEEEEEe--CCCEEEEecC-------CCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEE
Q psy7482          13 HTASVRSVAA--TSKLAASSGA-------DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFR   82 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~-------dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~   82 (327)
                      ....+..+++  +++++++++.       ++.|.+||..+++....+.. ...+..++|+|++++++ +...++.|.+||
T Consensus        39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d  117 (353)
T 3vgz_A           39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID  117 (353)
T ss_dssp             EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence            3456778888  7788877763       56899999999988877764 34478899999999555 556679999999


Q ss_pred             cCCCeEEEeEEecccCC-------ceeeEEEecCCCEEEEEe--CCCCEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482          83 VGSWQLEKLFKKAHKGT-------AVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW  153 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  153 (327)
                      ..+++....+.......       .+.++.|+|+++.+++++  .++.|.+||+.+++....+.....     .+..++|
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~  192 (353)
T 3vgz_A          118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-----MSTGLAL  192 (353)
T ss_dssp             TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT-----TCCCCEE
T ss_pred             CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC-----ccceEEE
Confidence            99999888773322111       168899999999887776  478899999999887766552221     2778999


Q ss_pred             ccCCcEEEeec-CCeEEEEEecCCceeeEecC-----CCceeEEEeecC-ceEEE-eCCCCcEEEEEcCCCceeEEeeec
Q psy7482         154 SPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKS-----ESKVHSVCFLNE-TTVCT-GNEESAITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       154 ~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~-----~~~i~~~~~~~~-~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~  225 (327)
                      +|+++.++++. ++.+.+||..+++....+..     ...+..++|+|+ +.+++ ...++.|.+||..+++.+..+...
T Consensus       193 s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~  272 (353)
T 3vgz_A          193 DSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP  272 (353)
T ss_dssp             ETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred             CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence            99999887776 89999999999998877762     445788999998 55554 445699999999999988877654


Q ss_pred             ccceEEEEEEecCCCcEEEE-ecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCC
Q psy7482         226 ASRIKGLVFFSIPQETTVCT-GNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAG  290 (327)
Q Consensus       226 ~~~v~~~~~~~s~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg  290 (327)
                      ..  ..++|+  |+++++++ ...++.|.+||..+++.+..+.... .+.+++|+|  ++|+.+..++
T Consensus       273 ~~--~~~~~s--~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~  335 (353)
T 3vgz_A          273 ES--LAVLFN--PARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVKQK  335 (353)
T ss_dssp             SC--CCEEEE--TTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEECC
T ss_pred             CC--ceEEEC--CCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEccc
Confidence            42  568885  89986554 4578999999999999888877554 678999998  6566666554

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.96  E-value=4e-25  Score=182.32  Aligned_cols=262  Identities=9%  Similarity=0.035  Sum_probs=203.3

Q ss_pred             ccccEEEEEECCCCCeEEEecC-------CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEE-eCCCCEEE
Q psy7482          53 HEGTITCLKFTPEGSHLISCSD-------DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV-GKDKTLRT  124 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i  124 (327)
                      ....+..++|+|+++++++++.       ++.|.+||..+++....+..  ... +..++|+|++++++.+ ..++.|.+
T Consensus        39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~-~~~~~~s~dg~~l~v~~~~~~~v~~  115 (353)
T 3vgz_A           39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLK-PFGATINNTTQTLWFGNTVNSAVTA  115 (353)
T ss_dssp             EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSC-CCSEEEETTTTEEEEEETTTTEEEE
T ss_pred             hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCC-cceEEECCCCCEEEEEecCCCEEEE
Confidence            3456789999999998887774       56899999999998888732  233 7889999999966555 55799999


Q ss_pred             EEcCCCceeeeeeccccCc----cccceEEEEEccCCcEEEeec---CCeEEEEEecCCceeeEec-CCCceeEEEeecC
Q psy7482         125 WNLVKGRSAYITNLSSYGV----GFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE  196 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~  196 (327)
                      ||..+++....+.......    ....+..++|+|+++.++++.   ++.|.+||..+++....+. ....+..++|+|+
T Consensus       116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d  195 (353)
T 3vgz_A          116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSE  195 (353)
T ss_dssp             EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred             EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCC
Confidence            9999998877666543210    011268899999998766654   6889999999999998888 6666899999999


Q ss_pred             -ceEEEeCCCCcEEEEEcCCCceeEEeee----cccceEEEEEEecCCCcEEEEecC-CCeEEEEEcCCCceeEEeeccc
Q psy7482         197 -TTVCTGNEESAITAYNLTDGSHLWQIKA----SASRIKGLVFFSIPQETTVCTGNE-ESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       197 -~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                       +.+++++.++.+.+||..+++.+..+..    +...+..++|.  |+++++++++. ++.|.+||+.+++.+..+....
T Consensus       196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s--~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~  273 (353)
T 3vgz_A          196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLD--TARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE  273 (353)
T ss_dssp             TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE--TTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS
T ss_pred             CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC--CCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence             7788888999999999999988877764    45567788995  89987766554 5999999999999888877544


Q ss_pred             CceEEEeeeC--cE-EEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         271 SRIKGLASHR--NH-LICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       271 ~~v~~~~~~~--~~-l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                        ...++|+|  ++ +++...++.|.+||..+.     ..+.....+..+.+++|+|+.
T Consensus       274 --~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----~~~~~~~~~~~~~~~~~s~dg  325 (353)
T 3vgz_A          274 --SLAVLFNPARNEAYVTHRQAGKVSVIDAKSY-----KVVKTFDTPTHPNSLALSADG  325 (353)
T ss_dssp             --CCCEEEETTTTEEEEEETTTTEEEEEETTTT-----EEEEEEECCSEEEEEEECTTS
T ss_pred             --CceEEECCCCCEEEEEECCCCeEEEEECCCC-----eEEEEEecCCCCCeEEEcCCC
Confidence              26789998  54 445557899999999887     233333445578999999873

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.95  E-value=2.2e-25  Score=200.45  Aligned_cols=274  Identities=16%  Similarity=0.220  Sum_probs=200.8

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC-----Ce
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-----WQ   87 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-----~~   87 (327)
                      ..|.+++|  + +.++.+. ++.|++||+.+++... +..+...+.+++|+|||+.|+++ .++.|++||+.+     ++
T Consensus        82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~  157 (706)
T 2z3z_A           82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR  157 (706)
T ss_dssp             CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred             cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence            56999999  6 6655553 6999999998876543 44466778899999999999985 678999999998     77


Q ss_pred             EEEeEEecccCC-------------ceeeEEEecCCCEEEEEe---------------------------------CCCC
Q psy7482          88 LEKLFKKAHKGT-------------AVNHISIHPSGKLALSVG---------------------------------KDKT  121 (327)
Q Consensus        88 ~~~~~~~~~~~~-------------~v~~~~~~~~~~~l~~~~---------------------------------~dg~  121 (327)
                      ..... ..+...             .+.++.|+|||++|++++                                 .+..
T Consensus       158 ~~~~~-~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~  236 (706)
T 2z3z_A          158 AIAVT-IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT  236 (706)
T ss_dssp             CEESC-SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred             cEEec-cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence            66544 333332             048899999999999987                                 3467


Q ss_pred             EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC-----eEEEEEecCCceeeEe-c--CCC---cee
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN-----KAVVFSVEKAGVLQTL-K--SES---KVH  189 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~-----~i~i~d~~~~~~~~~~-~--~~~---~i~  189 (327)
                      |.+||+.+++........   .+...+.+++|+|||+.++++. ++     .|++||+.+++....+ .  ...   .+.
T Consensus       237 l~~~d~~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~  313 (706)
T 2z3z_A          237 VGIYHLATGKTVYLQTGE---PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH  313 (706)
T ss_dssp             EEEEETTTTEEEECCCCS---CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred             EEEEECCCCceEeeccCC---CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence            999999888754333211   1234489999999999888765 54     8999999988433333 2  222   346


Q ss_pred             EEEeec--C-ceEEEeCCCCcEEEEEcC-CCceeEEeeecccceEE-EEEEecCCCcEEEEe-cCCC----eEEEEEcCC
Q psy7482         190 SVCFLN--E-TTVCTGNEESAITAYNLT-DGSHLWQIKASASRIKG-LVFFSIPQETTVCTG-NEES----AITAYNLTD  259 (327)
Q Consensus       190 ~~~~~~--~-~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~-~~~~~s~~~~~l~~~-~~d~----~i~i~d~~~  259 (327)
                      .++|+|  + .+++++..++.+++|++. +++.+..+..+...+.. ++|  +|+++.|+.+ +.++    .|..||+.+
T Consensus       314 ~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~--spdg~~l~~~~~~~~~~~~~l~~~d~~~  391 (706)
T 2z3z_A          314 PLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGF--DPKGTRLYFESTEASPLERHFYCIDIKG  391 (706)
T ss_dssp             CCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEE--CTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred             CceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEE--cCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence            789999  8 677788889999999876 66777778777777876 678  4899877654 4444    677778777


Q ss_pred             CceeEEeecccCceEEEeeeC--cEEEEEecC----CcEEEEEccCc
Q psy7482         260 GSHLWHIKASASRIKGLASHR--NHLICITSA----GDLVVWELNED  300 (327)
Q Consensus       260 ~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d----g~v~iw~~~~~  300 (327)
                      ++ ...+. +...+.+++|+|  ++++....+    +.|++||+..+
T Consensus       392 ~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~  436 (706)
T 2z3z_A          392 GK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG  436 (706)
T ss_dssp             CC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred             CC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence            65 33443 566789999999  666665443    45999998776

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.95  E-value=5.1e-25  Score=181.36  Aligned_cols=268  Identities=10%  Similarity=0.050  Sum_probs=187.7

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccccc-ccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEeccc---
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHK---   97 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~---   97 (327)
                      ++.++++++.++.|++||+.+++.+..+..+. ..+..++|+|++++++ ++..++.|.+||+.+++....+...+.   
T Consensus        10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~   89 (349)
T 1jmx_B           10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE   89 (349)
T ss_dssp             TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred             CCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc
Confidence            67788999999999999999998887776443 2578899999998654 556789999999999988877733331   


Q ss_pred             -CCceeeEEEecCCCEEEEEeCC------------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          98 -GTAVNHISIHPSGKLALSVGKD------------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        98 -~~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                       ...+..++|+|+++++++++.+            +.|.+||+.+++..........   ...+.+++|+|++++ +++ 
T Consensus        90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~l-~~~-  164 (349)
T 1jmx_B           90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM---PRQVYLMRAADDGSL-YVA-  164 (349)
T ss_dssp             EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC---CSSCCCEEECTTSCE-EEE-
T ss_pred             ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC---CCcccceeECCCCcE-EEc-
Confidence             1227889999999999998865            8999999988554332211111   113888999999994 444 


Q ss_pred             CCeEEEEEecCCceeeEecCCC-------------------------ceeEEEeecCc-eEEEeC-CCCcEEEEEcCCCc
Q psy7482         165 QNKAVVFSVEKAGVLQTLKSES-------------------------KVHSVCFLNET-TVCTGN-EESAITAYNLTDGS  217 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~~~~-------------------------~i~~~~~~~~~-~l~~~~-~d~~i~i~d~~~~~  217 (327)
                      ++.|.+||..+++....+....                         ....+++++++ ...... ....+..+|..+++
T Consensus       165 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  244 (349)
T 1jmx_B          165 GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK  244 (349)
T ss_dssp             SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred             cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence            3449999999998887776322                         23445555431 000000 00111224444433


Q ss_pred             e-eEEeeecccceEEEEEEecC-CCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEE
Q psy7482         218 H-LWQIKASASRIKGLVFFSIP-QETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLV  293 (327)
Q Consensus       218 ~-~~~~~~~~~~v~~~~~~~s~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~  293 (327)
                      . ...+..+...+..+++  +| ++++++++  ++.|.+||+.+++.+..+... ..+.+++|+|  ++|++++.++.|+
T Consensus       245 ~~~~~~~~~~~~~~~~~~--sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~  319 (349)
T 1jmx_B          245 THTQEFADLTELYFTGLR--SPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLA  319 (349)
T ss_dssp             EEEEEEEECSSCEEEEEE--CSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEE
T ss_pred             EEecccccCCCcceeeEe--cCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEE
Confidence            2 1122334556788888  48 99999988  889999999999988777644 3578899998  6777788899999


Q ss_pred             EEEccCc
Q psy7482         294 VWELNED  300 (327)
Q Consensus       294 iw~~~~~  300 (327)
                      +||+.+.
T Consensus       320 v~d~~~~  326 (349)
T 1jmx_B          320 VFNPDTL  326 (349)
T ss_dssp             EEETTTT
T ss_pred             EEecccc
Confidence            9999887

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.95  E-value=1.8e-24  Score=177.66  Aligned_cols=259  Identities=10%  Similarity=0.122  Sum_probs=178.9

Q ss_pred             cCCccEEEEEe--CCCEEEEecCC-CeEEEEEcc--ccc--cccccccccccEEEEEECCCCCeEEEecC-CCcEEEEEc
Q psy7482          12 SHTASVRSVAA--TSKLAASSGAD-ETVVLYDMV--KRK--QSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRV   83 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~d-g~v~~w~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~   83 (327)
                      .|...+.+++|  ++++|++++.+ +.|++|++.  +++  .+..+..+. .+..++|+|++++|++++. ++.|.+||+
T Consensus        35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~  113 (343)
T 1ri6_A           35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRL  113 (343)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence            47778888998  88888888776 999999997  444  333444333 7889999999998876654 888999999


Q ss_pred             CCC---eEEEeEEecccCCceeeEEEecCCCEEEEEe-CCCCEEEEEcCC-Cceeeee--eccccCccccceEEEEEccC
Q psy7482          84 GSW---QLEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVK-GRSAYIT--NLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        84 ~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~~--~~~~~~~~~~~v~~~~~~~~  156 (327)
                      ..+   +....+ . .... +.+++|+|+++++++++ .++.|.+||+.+ ++.....  ......  ...+..++|+|+
T Consensus       114 ~~~~~~~~~~~~-~-~~~~-~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pd  188 (343)
T 1ri6_A          114 EDGLPVGVVDVV-E-GLDG-CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE--GAGPRHMVFHPN  188 (343)
T ss_dssp             ETTEEEEEEEEE-C-CCTT-BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST--TCCEEEEEECTT
T ss_pred             CCCccccccccc-c-CCCC-ceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC--CCCcceEEECCC
Confidence            433   333333 2 2233 89999999999888887 889999999987 5443222  111111  123788999999


Q ss_pred             CcEEEeec--CCeEEEEEecC--Cce--eeEec---C----CCceeEEEeecC-ceEE-EeCCCCcEEEEEcCC----Cc
Q psy7482         157 GLLYAIPI--QNKAVVFSVEK--AGV--LQTLK---S----ESKVHSVCFLNE-TTVC-TGNEESAITAYNLTD----GS  217 (327)
Q Consensus       157 ~~~l~~~~--~~~i~i~d~~~--~~~--~~~~~---~----~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~----~~  217 (327)
                      +++++++.  ++.+.+||+..  ++.  ...+.   .    ...+..++|+|+ ++++ ++..++.|.+||+..    .+
T Consensus       189 g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~  268 (343)
T 1ri6_A          189 EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS  268 (343)
T ss_dssp             SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE
T ss_pred             CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE
Confidence            99665443  89999999953  332  22222   1    235668999998 4555 566899999999982    33


Q ss_pred             eeEEeeecccceEEEEEEecCCCcEEEEec-CCCeEEEEEcC--CCc--eeEEeecccCceEEEeeeC
Q psy7482         218 HLWQIKASASRIKGLVFFSIPQETTVCTGN-EESAITAYNLT--DGS--HLWHIKASASRIKGLASHR  280 (327)
Q Consensus       218 ~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~~~  280 (327)
                      .+..+..+.. +..++|  +|++++|++++ .++.|.+|++.  +++  .+..+... ....+++|.+
T Consensus       269 ~~~~~~~~~~-~~~~~~--s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~  332 (343)
T 1ri6_A          269 KEGFQPTETQ-PRGFNV--DHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNA  332 (343)
T ss_dssp             EEEEEECSSS-CCCEEE--CTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEE
T ss_pred             EeeeecCCCc-cceEEE--CCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEc
Confidence            4445554444 888999  48999888777 68999999554  554  33444432 3445666655

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.95  E-value=7.9e-24  Score=174.30  Aligned_cols=263  Identities=11%  Similarity=0.186  Sum_probs=179.3

Q ss_pred             CCCeEEEEEcc--cccccc-ccccccccEEEEEECCCCCeEEEecC---CCcEEEEEcCCCeEE--EeEEecccCCceee
Q psy7482          32 ADETVVLYDMV--KRKQSG-ALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGSWQLE--KLFKKAHKGTAVNH  103 (327)
Q Consensus        32 ~dg~v~~w~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~~~~~--~~~~~~~~~~~v~~  103 (327)
                      .++.|.+|++.  +++... ....+...+..++|+|+|+ |++++.   ++.|.+|++.+++..  ..+ ..+... +..
T Consensus        14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~-~~~~~~-p~~   90 (347)
T 3hfq_A           14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV-VAPGTP-PAY   90 (347)
T ss_dssp             SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE-EEESCC-CSE
T ss_pred             CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee-ecCCCC-CEE
Confidence            45668887765  344332 2234556678899999999 555544   689999999877643  332 334445 899


Q ss_pred             EEEecCCCEEEEEe-CCCCEEEEEcC-CCceeeeeeccccC------ccccceEEEEEccCCcEEEeec-CCeEEEEEec
Q psy7482         104 ISIHPSGKLALSVG-KDKTLRTWNLV-KGRSAYITNLSSYG------VGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVE  174 (327)
Q Consensus       104 ~~~~~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~  174 (327)
                      ++|+|++++|++++ .++.+.+|++. ++............      .....+.+++|+|+++++++.. ++.|.+|++.
T Consensus        91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~  170 (347)
T 3hfq_A           91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVS  170 (347)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred             EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEEC
Confidence            99999999888888 67899999995 33322222221110      0122378899999999655555 7899999998


Q ss_pred             -CCceee--Eec--CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCC--Cce--eEEeeecc------cceEEEEEEec
Q psy7482         175 -KAGVLQ--TLK--SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTD--GSH--LWQIKASA------SRIKGLVFFSI  237 (327)
Q Consensus       175 -~~~~~~--~~~--~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~~~s  237 (327)
                       +++...  .+.  ....+..++|+|+ +++ +++..++.+.+|++..  ++.  +..+....      ..+..++|  +
T Consensus       171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~--s  248 (347)
T 3hfq_A          171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRL--S  248 (347)
T ss_dssp             TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEE--C
T ss_pred             CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEE--C
Confidence             454332  222  3346788999999 544 4467789999999874  432  22222222      34778999  5


Q ss_pred             CCCcEEE-EecCCCeEEEEEcCC---CceeEEeecccCceEEEeeeC--cEEEEEecC-CcEEEEEccC
Q psy7482         238 PQETTVC-TGNEESAITAYNLTD---GSHLWHIKASASRIKGLASHR--NHLICITSA-GDLVVWELNE  299 (327)
Q Consensus       238 ~~~~~l~-~~~~d~~i~i~d~~~---~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d-g~v~iw~~~~  299 (327)
                      |+|++|+ +...++.|.+|++..   .+.+..+..+...+..++|+|  ++|++++.+ +.|.+|+++.
T Consensus       249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~  317 (347)
T 3hfq_A          249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL  317 (347)
T ss_dssp             TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred             CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence            9999874 555689999999973   245566666666789999999  677777654 8899996653

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.95  E-value=2.4e-25  Score=207.90  Aligned_cols=274  Identities=10%  Similarity=0.042  Sum_probs=217.2

Q ss_pred             ccCCccEEEEEe-CCCEEEEecCCCeEEEEEccc-cccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          11 HSHTASVRSVAA-TSKLAASSGADETVVLYDMVK-RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        11 ~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      .+|...+.++.| ...++++++.|+.++||.+.. +.....+..|. .+...+|+|+|+.|+.+ .++.|.+|++...+.
T Consensus       200 ~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l  277 (1045)
T 1k32_A          200 VDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKI  277 (1045)
T ss_dssp             ECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCE
T ss_pred             cCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEe
Confidence            589999999999 335666788889999998753 44445555554 36677999999999887 488999999954443


Q ss_pred             EEeEEec-----------ccCCceeeEEEe-cCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcccc-ceEEEEEcc
Q psy7482          89 EKLFKKA-----------HKGTAVNHISIH-PSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFE-NLDSVVWSP  155 (327)
Q Consensus        89 ~~~~~~~-----------~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~  155 (327)
                      . .+ ..           +... +.+++|+ |+|+.|++++ ++.+.+|++..++....   ...   .. .+..++|+ 
T Consensus       278 ~-~l-~~~~~~~~~~~~~~~~~-v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~---~~~---~~~~~~~~~~s-  346 (1045)
T 1k32_A          278 E-KI-EIGDLESPEDRIISIPS-KFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV---PEP---LRIRYVRRGGD-  346 (1045)
T ss_dssp             E-EC-CCCCCCBCCSEEEECGG-GGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC---SCC---SCEEEEEECSS-
T ss_pred             e-ee-ccCcccccccccccccc-cceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEc---cCC---CcceEEeeeEc-
Confidence            3 43 22           2224 8999999 9999999887 78999999987764332   111   22 48899999 


Q ss_pred             CCcEEEeec-CCeEE-EEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEE
Q psy7482         156 EGLLYAIPI-QNKAV-VFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL  232 (327)
Q Consensus       156 ~~~~l~~~~-~~~i~-i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~  232 (327)
                      +++.++.++ ++.+. +||+.+++......+...+..++|+|| .++++++.++.|++||+.+++.......|...+..+
T Consensus       347 dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~  426 (1045)
T 1k32_A          347 TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDF  426 (1045)
T ss_dssp             SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCE
T ss_pred             CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccce
Confidence            998888876 67788 889887765444446678999999999 788999999999999999998877777898899999


Q ss_pred             EEEecCCCcEEEEecCCC----------eEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         233 VFFSIPQETTVCTGNEES----------AITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       233 ~~~~s~~~~~l~~~~~d~----------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +|  +|+|++|++++.++          .|++||+.+++ +..+..|...+..++|+|  +.|+.++.++...+|+....
T Consensus       427 ~~--SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~  503 (1045)
T 1k32_A          427 TI--SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL  503 (1045)
T ss_dssp             EE--CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred             EE--CCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence            99  59999998877644          89999999887 677788888899999999  88999999888888986543

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.95  E-value=4.4e-25  Score=199.59  Aligned_cols=273  Identities=13%  Similarity=0.108  Sum_probs=204.0

Q ss_pred             cEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          16 SVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .|.+++|  ||++|++++. +.|++||+.+++  ....+..|...+..++|+|||++|+.++ ++.|++||+.+++....
T Consensus       110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~  187 (741)
T 2ecf_A          110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL  187 (741)
T ss_dssp             ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred             CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence            4778888  9999998885 999999998873  4556777888899999999999999887 45899999998877655


Q ss_pred             EEecccCC---------------ceeeEEEecCCCEEEEEeCCC---------------------------------CEE
Q psy7482          92 FKKAHKGT---------------AVNHISIHPSGKLALSVGKDK---------------------------------TLR  123 (327)
Q Consensus        92 ~~~~~~~~---------------~v~~~~~~~~~~~l~~~~~dg---------------------------------~i~  123 (327)
                      . ..+...               .+..+.|+|||++|++++.|+                                 .|.
T Consensus       188 ~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~  266 (741)
T 2ecf_A          188 T-ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG  266 (741)
T ss_dssp             C-CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred             c-cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence            4 333221               147899999999999987765                                 788


Q ss_pred             EEEcCC-CceeeeeeccccCccccceEEEEEccCCcEEEeec------CCeEEEEEecCCceeeEecC-C-C---ceeEE
Q psy7482         124 TWNLVK-GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI------QNKAVVFSVEKAGVLQTLKS-E-S---KVHSV  191 (327)
Q Consensus       124 iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~~~i~i~d~~~~~~~~~~~~-~-~---~i~~~  191 (327)
                      +||+.+ ++.......   ..+...+..++| |||+.|+++.      +..|++||+.+++....+.. . .   .+..+
T Consensus       267 ~~d~~~~~~~~~~~~~---~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~  342 (741)
T 2ecf_A          267 VISPAEQAQTQWIDLG---KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL  342 (741)
T ss_dssp             EECSSTTCCCEEECCC---SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred             EEECCCCCceEEecCC---CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence            999988 765433211   122345899999 9999888653      46799999999987776652 2 2   45689


Q ss_pred             EeecC-ceEEEeCCCCcEEEEEcC-CCceeEEeeecccceEEEE-EEecCCCcEEE-EecCCC--eEEEEEcCC-CceeE
Q psy7482         192 CFLNE-TTVCTGNEESAITAYNLT-DGSHLWQIKASASRIKGLV-FFSIPQETTVC-TGNEES--AITAYNLTD-GSHLW  264 (327)
Q Consensus       192 ~~~~~-~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~-~~~s~~~~~l~-~~~~d~--~i~i~d~~~-~~~~~  264 (327)
                      +|+|| .++++++.+|.+++|.+. +++ ...+..+...+..+. |+  |+++.|+ +++.++  .+++|++.. +....
T Consensus       343 ~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s--~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~  419 (741)
T 2ecf_A          343 RFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVD--EKAGLAYFRAGIESARESQIYAVPLQGGQPQ  419 (741)
T ss_dssp             EECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEE--TTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred             EECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEe--CCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence            99999 677788889988888775 344 777777877888874 74  8998765 555555  899999864 55566


Q ss_pred             EeecccCceEEEeeeC--cEEEEEecC----CcEEEEEccC
Q psy7482         265 HIKASASRIKGLASHR--NHLICITSA----GDLVVWELNE  299 (327)
Q Consensus       265 ~~~~~~~~v~~~~~~~--~~l~~~~~d----g~v~iw~~~~  299 (327)
                      .+.. ...+..++|+|  +.|+....+    +.+.+|+...
T Consensus       420 ~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~  459 (741)
T 2ecf_A          420 RLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG  459 (741)
T ss_dssp             ECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred             eccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence            6665 55788999999  555554433    4588888644

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.95  E-value=1.2e-23  Score=174.18  Aligned_cols=292  Identities=10%  Similarity=0.136  Sum_probs=190.7

Q ss_pred             EEEEe----cCCCeEEEEEcc--ccccccccccccccEEEEEECCCCCeEEEecCC----CcEEEEEcCC--CeEEEeEE
Q psy7482          26 LAASS----GADETVVLYDMV--KRKQSGALMQHEGTITCLKFTPEGSHLISCSDD----GSIAIFRVGS--WQLEKLFK   93 (327)
Q Consensus        26 ~l~~~----~~dg~v~~w~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~--~~~~~~~~   93 (327)
                      +++.|    +.++.|.+|++.  +++.......+...+..++|+|++++|++++.+    +.|.+|++..  ++......
T Consensus        15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~   94 (361)
T 3scy_A           15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNT   94 (361)
T ss_dssp             EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEE
T ss_pred             EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeE
Confidence            44555    346789999764  444332222266678889999999999988875    7999998865  44332221


Q ss_pred             -ecccCCceeeEEEecCCCEEEEEe-CCCCEEEEEcCCCceeeee----ecccc-----CccccceEEEEEccCCcEEEe
Q psy7482          94 -KAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYIT----NLSSY-----GVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        94 -~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~----~~~~~-----~~~~~~v~~~~~~~~~~~l~~  162 (327)
                       ..+... ...+++  ++++|++++ .++.+.+|++.....+...    .....     ......+.+++|+|+++++++
T Consensus        95 ~~~~~~~-p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~  171 (361)
T 3scy_A           95 QKTMGAD-PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA  171 (361)
T ss_dssp             EECSSSC-EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred             eccCCCC-cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence             223334 677777  788777776 5789999999754332111    11110     001123678999999996655


Q ss_pred             ec--CCeEEEEEecCCce--------------eeEecCCCceeEEEeecC-ceEEEeC-CCCcEEEEEcCCCce--eEEe
Q psy7482         163 PI--QNKAVVFSVEKAGV--------------LQTLKSESKVHSVCFLNE-TTVCTGN-EESAITAYNLTDGSH--LWQI  222 (327)
Q Consensus       163 ~~--~~~i~i~d~~~~~~--------------~~~~~~~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~~~~~~--~~~~  222 (327)
                      +.  ++.+.+|++.....              .........+..++|+|+ +++++++ .++.|.+|++.+++.  +..+
T Consensus       172 ~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~  251 (361)
T 3scy_A          172 DDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTV  251 (361)
T ss_dssp             EETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEE
T ss_pred             EeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEE
Confidence            54  78999999875431              112235567889999999 5565555 689999999987654  2222


Q ss_pred             e---ecccceEEEEEEecCCCcEEEEecC--CCeEEEEEcC--CCc--eeEEeecccCceEEEeeeC--cEEEEEe-cCC
Q psy7482         223 K---ASASRIKGLVFFSIPQETTVCTGNE--ESAITAYNLT--DGS--HLWHIKASASRIKGLASHR--NHLICIT-SAG  290 (327)
Q Consensus       223 ~---~~~~~v~~~~~~~s~~~~~l~~~~~--d~~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~~~--~~l~~~~-~dg  290 (327)
                      .   .+......++|  +|+|++|+++..  ++.|.+|++.  +++  .+..+.. ...+.+++|+|  ++|++++ .++
T Consensus       252 ~~~~~~~~~~~~i~~--spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~  328 (361)
T 3scy_A          252 AADTVNAQGSGDIHL--SPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTN  328 (361)
T ss_dssp             ESCSSCCCCEEEEEE--CTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTT
T ss_pred             ecCCCCCCCcccEEE--CCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCC
Confidence            2   22334678888  599999876665  4899999986  444  4444544 45788999999  6777776 678


Q ss_pred             cEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482         291 DLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       291 ~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                      .|.+|+++... .....+....+...++|++|.+
T Consensus       329 ~v~v~~~d~~~-g~~~~~~~~~~~~~p~~v~~~~  361 (361)
T 3scy_A          329 VIQIFERDQAT-GLLTDIKKDIKVDKPVCLKFVD  361 (361)
T ss_dssp             EEEEEEECTTT-CCEEECSCCEECSSEEEEEEEC
T ss_pred             CEEEEEEECCC-CcEeecceeeeCCCCeEEEEcC
Confidence            89998776431 1233332222334689999863

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.94  E-value=4.4e-24  Score=174.57  Aligned_cols=242  Identities=10%  Similarity=0.147  Sum_probs=175.7

Q ss_pred             CCccEEEEEe--CCCEEEEec-CCCeEEEEEcccccc-ccccccccccEEEEEECCCCCeEEEecCCC---cEEEEEcCC
Q psy7482          13 HTASVRSVAA--TSKLAASSG-ADETVVLYDMVKRKQ-SGALMQHEGTITCLKFTPEGSHLISCSDDG---SIAIFRVGS   85 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~-~dg~v~~w~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iw~~~~   85 (327)
                      +...+ +++|  +++++++++ .++.|.+||+.+++. ...+..+..+..+++|+|++++|+++..++   .|.+||+.+
T Consensus        39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~  117 (331)
T 3u4y_A           39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLK  117 (331)
T ss_dssp             CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred             cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence            44555 8888  788666555 489999999999887 667776666666699999999999665553   899999999


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEE-eCCCC-EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSV-GKDKT-LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      ++....+ .. ... ..+++|+|++++++++ ..++. |.+|++.............. .....+..++|+|+++.++++
T Consensus       118 ~~~~~~~-~~-~~~-~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~  193 (331)
T 3u4y_A          118 NKFISTI-PI-PYD-AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVA  193 (331)
T ss_dssp             TEEEEEE-EC-CTT-EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEE
T ss_pred             CCeEEEE-EC-CCC-ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEE
Confidence            9988876 33 233 7899999999866555 45588 99999875433221110000 111237899999999865554


Q ss_pred             -c-CCeEEEEEecCCce---eeEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCce--eEEeeec----ccc--
Q psy7482         164 -I-QNKAVVFSVEKAGV---LQTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGSH--LWQIKAS----ASR--  228 (327)
Q Consensus       164 -~-~~~i~i~d~~~~~~---~~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~~--~~~~~~~----~~~--  228 (327)
                       . ++.|.+||+.+++.   +..+.....+..++|+|+ ++++ +...++.|.+||+.+++.  +..+..+    ..+  
T Consensus       194 ~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~  273 (331)
T 3u4y_A          194 NLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLF  273 (331)
T ss_dssp             ETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGT
T ss_pred             eCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcc
Confidence             3 88999999999988   777777788899999999 5454 445678899999998876  3333322    222  


Q ss_pred             -eEEEEEEecCCCcEEEEe-cCCCeEEEEEcCCCc
Q psy7482         229 -IKGLVFFSIPQETTVCTG-NEESAITAYNLTDGS  261 (327)
Q Consensus       229 -v~~~~~~~s~~~~~l~~~-~~d~~i~i~d~~~~~  261 (327)
                       ...++|  +|++++|+++ ..++.|.+||+....
T Consensus       274 ~~~~~~~--spdg~~l~v~~~~~~~v~v~d~~~~~  306 (331)
T 3u4y_A          274 GANQMAL--NKTETKLFISANISRELKVFTISGKV  306 (331)
T ss_dssp             TCCCEEE--CTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred             cccceEE--CCCCCEEEEecCCCCcEEEEEecCCc
Confidence             245788  4999987654 556799999997654

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=1.5e-24  Score=174.20  Aligned_cols=242  Identities=12%  Similarity=0.118  Sum_probs=180.7

Q ss_pred             EecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC-CceeeeeeccccCccccceE
Q psy7482          71 SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK-GRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        71 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~  149 (327)
                      .++.|+.|++||+.+++.....  .|... +.+++|+|++++|++++ ++.|.+||+.+ ++........    ....+.
T Consensus        17 ~~~~~~~i~~~d~~~~~~~~~~--~~~~~-v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~----~~~~~~   88 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMRVVW--QTPEL-FEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGF----ATICNN   88 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEEEEE--EESSC-CEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTT----CCCBCS
T ss_pred             CCCcceeEEEEeCCCCceeeec--cCCcc-eEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccc----cccccc
Confidence            4567899999999988876443  46666 99999999999999886 78999999988 7665433222    123488


Q ss_pred             EEEEccCCcEEEeec---C--CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCC-CceeEE
Q psy7482         150 SVVWSPEGLLYAIPI---Q--NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTD-GSHLWQ  221 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~---~--~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~-~~~~~~  221 (327)
                      +++|+|+++.++++.   +  ..|..++..+++ ...+.....+..++|+|+ ..++ ++..++.+++|++.. ......
T Consensus        89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~  167 (297)
T 2ojh_A           89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR  167 (297)
T ss_dssp             CCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred             ceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence            999999999888876   2  345555555544 445555556899999999 5555 777899999998632 334556


Q ss_pred             eeecccceEEEEEEecCCCcEEEEec-CCCeEEEEEcC-CCceeEEeecccCceEEEeeeC--cEEEEEecC--------
Q psy7482         222 IKASASRIKGLVFFSIPQETTVCTGN-EESAITAYNLT-DGSHLWHIKASASRIKGLASHR--NHLICITSA--------  289 (327)
Q Consensus       222 ~~~~~~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d--------  289 (327)
                      +..+...+.+++|+  |++++|+.++ .++.+++|++. .+..+..+..|...+..++|+|  ++|++++.+        
T Consensus       168 ~~~~~~~~~~~~~s--~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~  245 (297)
T 2ojh_A          168 LTHGEGRNDGPDYS--PDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPR  245 (297)
T ss_dssp             CCCSSSCEEEEEEC--TTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred             cccCCCccccceEC--CCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence            66777889999994  8999887655 58999999986 5667778888888899999999  778877766        


Q ss_pred             ---CcEEEEEccCccCCCceeee-ecCCCCceEEEEeCCCC
Q psy7482         290 ---GDLVVWELNEDVTREPQRVS-ATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       290 ---g~v~iw~~~~~~~~~~~~~~-~~~~~~~i~~l~~~p~~  326 (327)
                         +.|++||+..+   ....+. ...+...+.+++|+|+.
T Consensus       246 ~~~~~l~~~d~~~~---~~~~~~~~~~~~~~~~~~~~spdg  283 (297)
T 2ojh_A          246 DLDVRVQLMDMDGG---NVETLFDLFGGQGTMNSPNWSPDG  283 (297)
T ss_dssp             SEEEEEEEEETTSC---SCEEEEEEEESTTTSCSCCBCTTS
T ss_pred             cCceEEEEEecCCC---CceeeeccCCCCcccccceECCCC
Confidence               46999999887   333333 22456678899999873

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.94  E-value=1e-24  Score=191.85  Aligned_cols=265  Identities=12%  Similarity=0.063  Sum_probs=195.6

Q ss_pred             CCccEEEEEe--CCCEEEEecC-CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC---CCcEEEEEcCC-
Q psy7482          13 HTASVRSVAA--TSKLAASSGA-DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGS-   85 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~-dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iw~~~~-   85 (327)
                      +..+|.+++|  ||+.||+++. ||+++||++.+++..+....+...+..++|+|| +.+++++.   +....+|.+.. 
T Consensus        20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~   98 (582)
T 3o4h_A           20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS   98 (582)
T ss_dssp             HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred             hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence            3567999998  9999998886 999999999766655444333368999999999 77777664   45566665533 


Q ss_pred             --CeEEEeEEecccCCceeeEEEecCCCE-EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          86 --WQLEKLFKKAHKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        86 --~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                        +... .+ .. ... +...+|+|+++. +++.+.++.+.+||+.+++........        ..+++|+|||+.++.
T Consensus        99 ~~g~~~-~l-~~-~~~-~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~--------~~~~~~spDG~~la~  166 (582)
T 3o4h_A           99 RPGEEQ-RL-EA-VKP-MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP--------GFGFVSDIRGDLIAG  166 (582)
T ss_dssp             STTCCE-EC-TT-SCS-BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES--------SCEEEEEEETTEEEE
T ss_pred             CCCccc-cc-cC-CCC-ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC--------CceEEECCCCCEEEE
Confidence              2222 33 22 222 556788888853 344445556679999988765443221        268899999999997


Q ss_pred             ec-C----CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCC--cEEEEEcCCCceeEEeeecccceEEEE-
Q psy7482         163 PI-Q----NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEES--AITAYNLTDGSHLWQIKASASRIKGLV-  233 (327)
Q Consensus       163 ~~-~----~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~-  233 (327)
                      ++ +    +.|++||+.+++......+...+..++|+|| ..|+++..++  .|++||+.+++.. .+..|...+..++ 
T Consensus       167 ~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~  245 (582)
T 3o4h_A          167 LGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRP  245 (582)
T ss_dssp             EEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCC
T ss_pred             EEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhh
Confidence            65 4    6799999998887655457788999999999 6777777888  8999999988877 7777777676666 


Q ss_pred             -------EEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEecCCc---EEEEEcc
Q psy7482         234 -------FFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITSAGD---LVVWELN  298 (327)
Q Consensus       234 -------~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~---v~iw~~~  298 (327)
                             |  +|+|.++++++.|+.+++|++  ++...   .+.+.+.+++|+. +++++++.+..   +.+|+..
T Consensus       246 ~~~~~~~~--spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~  314 (582)
T 3o4h_A          246 TAITWLGY--LPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLWRGKLVTSHTSLSTPPRIVSLPSG  314 (582)
T ss_dssp             SEEEEEEE--CTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEETTEEEEEEEETTEEEEEEEETTC
T ss_pred             ccccceeE--cCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEecCCEEEEEEcCCCCCCeEEEEcCC
Confidence                   8  599999999999999999999  65544   3446788888888 77788887754   6666654

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.94  E-value=4.6e-24  Score=174.74  Aligned_cols=239  Identities=12%  Similarity=0.158  Sum_probs=184.5

Q ss_pred             cEEEEEe--CCCEE-EEecCCCeEEEEEcccccccccccc-c----cccEEEEEECCCCCeEEEec------------CC
Q psy7482          16 SVRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQ-H----EGTITCLKFTPEGSHLISCS------------DD   75 (327)
Q Consensus        16 ~v~~~~~--~~~~l-~~~~~dg~v~~w~~~~~~~~~~~~~-~----~~~v~~~~~~~~~~~l~~~~------------~d   75 (327)
                      .+..++|  +++++ +++..++.|.+||+.+++.+..+.. +    ...+..++|+|++++|+++.            .+
T Consensus        35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~  114 (337)
T 1pby_B           35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP  114 (337)
T ss_dssp             CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred             CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence            4667788  77655 5666789999999999887766553 1    22577899999999998886            57


Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      +.|.+||+.+++....+ .. ... +.+++|+|++++++++  ++.|.+||+.+++....+......      ..+.|+|
T Consensus       115 ~~i~v~d~~~~~~~~~~-~~-~~~-~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~------~~~~~s~  183 (337)
T 1pby_B          115 TRVALYDAETLSRRKAF-EA-PRQ-ITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE------AETYAQP  183 (337)
T ss_dssp             CEEEEEETTTTEEEEEE-EC-CSS-CCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT------TTTBCCC
T ss_pred             ceEEEEECCCCcEEEEE-eC-CCC-cceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC------CCceeCC
Confidence            99999999998888777 32 233 8889999999988887  689999999998876555443311      1226889


Q ss_pred             CCcEEEeec--CC-----------------------eEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeCCCC
Q psy7482         156 EGLLYAIPI--QN-----------------------KAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGNEES  206 (327)
Q Consensus       156 ~~~~l~~~~--~~-----------------------~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~~d~  206 (327)
                      +++.++...  ++                       .|.+||+.+++.. .+.   +...+.+++|+|+ ++++++  ++
T Consensus       184 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~  260 (337)
T 1pby_B          184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YN  260 (337)
T ss_dssp             BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ES
T ss_pred             CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CC
Confidence            888665543  22                       4689999988765 332   5567889999999 567666  79


Q ss_pred             cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC
Q psy7482         207 AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS  271 (327)
Q Consensus       207 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  271 (327)
                      .|.+||+.+++.+..+..+ ..+.+++|  +|++++|++++.++.|.+||+.+++.+..+..+..
T Consensus       261 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~--s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~  322 (337)
T 1pby_B          261 VLESFDLEKNASIKRVPLP-HSYYSVNV--STDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN  322 (337)
T ss_dssp             EEEEEETTTTEEEEEEECS-SCCCEEEE--CTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred             eEEEEECCCCcCcceecCC-CceeeEEE--CCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence            9999999999888777644 45788899  49999999999999999999999998888876543

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.93  E-value=6e-23  Score=169.01  Aligned_cols=247  Identities=12%  Similarity=0.177  Sum_probs=169.2

Q ss_pred             cCCccEEEEEe--CCCEEEEecC---CCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEec-CCCcEEEEEc
Q psy7482          12 SHTASVRSVAA--TSKLAASSGA---DETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRV   83 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~---dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~   83 (327)
                      .+...+..++|  +++ |++++.   ++.|++|++.+++  .+..+..+...+..++|+|++++|++++ .++.|.+|++
T Consensus        37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~  115 (347)
T 3hfq_A           37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI  115 (347)
T ss_dssp             EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence            34566667888  777 554443   6899999997665  3444455677889999999999888877 6789999999


Q ss_pred             C-CCe--EEEeEEecc-------cCCceeeEEEecCCCEEEEEeCCCCEEEEEcC-CCceeeeeeccccCccccceEEEE
Q psy7482          84 G-SWQ--LEKLFKKAH-------KGTAVNHISIHPSGKLALSVGKDKTLRTWNLV-KGRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        84 ~-~~~--~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                      . ++.  .+..+....       ....+.+++|+|+++++++...++.|.+|++. +++...........  ...+..++
T Consensus       116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~--g~~p~~~~  193 (347)
T 3hfq_A          116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA--GFGPRHLV  193 (347)
T ss_dssp             CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT--TCCEEEEE
T ss_pred             CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC--CCCCceEE
Confidence            5 333  223221110       01127889999999966666668899999998 45433222111111  12377899


Q ss_pred             EccCCcEEEee-c-CCeEEEEEecC--Cce--eeEec-CC------CceeEEEeecC-ceE-EEeCCCCcEEEEEcCCC-
Q psy7482         153 WSPEGLLYAIP-I-QNKAVVFSVEK--AGV--LQTLK-SE------SKVHSVCFLNE-TTV-CTGNEESAITAYNLTDG-  216 (327)
Q Consensus       153 ~~~~~~~l~~~-~-~~~i~i~d~~~--~~~--~~~~~-~~------~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~-  216 (327)
                      |+|+|++++++ . ++.+.+|++..  ++.  ...+. ..      ..+..++|+|+ +++ ++...++.|.+|++... 
T Consensus       194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g  273 (347)
T 3hfq_A          194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG  273 (347)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG
T ss_pred             ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC
Confidence            99999966664 3 78999999874  442  22222 11      45889999999 455 55567899999999732 


Q ss_pred             --ceeEEeeecccceEEEEEEecCCCcEEEEecC-CCeEEEEEc--CCCcee
Q psy7482         217 --SHLWQIKASASRIKGLVFFSIPQETTVCTGNE-ESAITAYNL--TDGSHL  263 (327)
Q Consensus       217 --~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~--~~~~~~  263 (327)
                        +.+..+..+...+..++|  +|+|++|++++. ++.|.+|++  .+++..
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~--spdg~~l~v~~~~~~~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          274 HLTLIQQISTEGDFPRDFDL--DPTEAFVVVVNQNTDNATLYARDLTSGKLS  323 (347)
T ss_dssp             CEEEEEEEECSSSCCCEEEE--CTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             cEEEeEEEecCCCCcCeEEE--CCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence              445555666667889999  599998887765 489999954  456543

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.93  E-value=5.7e-23  Score=173.50  Aligned_cols=193  Identities=17%  Similarity=0.191  Sum_probs=143.2

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccc----------c-----ccccccccEEEEEECCCCCeEE----Eec
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS----------G-----ALMQHEGTITCLKFTPEGSHLI----SCS   73 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~----------~-----~~~~~~~~v~~~~~~~~~~~l~----~~~   73 (327)
                      ..++.+++  ++.++++++.++ +++|+.......          .     ....+...|++++|+|++++|+    +|+
T Consensus        37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs  115 (434)
T 2oit_A           37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE  115 (434)
T ss_dssp             SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred             CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence            34666777  788999998887 899876432110          0     0112456799999999999999    889


Q ss_pred             CCCcEEEEEcCCC--------eE---EEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeecccc
Q psy7482          74 DDGSIAIFRVGSW--------QL---EKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSY  141 (327)
Q Consensus        74 ~d~~i~iw~~~~~--------~~---~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  141 (327)
                      .|+.|++||+.++        +.   ...+ .+|... |.+++|+|+ +.+|++++.||.|++||++++........   
T Consensus       116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~-V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~---  190 (434)
T 2oit_A          116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLL-KDAGGM-VIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP---  190 (434)
T ss_dssp             TEEEEEEEEHHHHHCTTCSSCCCSEEEECC-CSGGGS-EEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC---
T ss_pred             CCceEEEEEccccccCCcCCcceeeeeecc-CCCCCc-eEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC---
Confidence            9999999998754        22   2333 557777 999999997 78999999999999999998854332221   


Q ss_pred             CccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-C-------CCceeEEEeecCceEEE--eCCCC----
Q psy7482         142 GVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-S-------ESKVHSVCFLNETTVCT--GNEES----  206 (327)
Q Consensus       142 ~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~-------~~~i~~~~~~~~~~l~~--~~~d~----  206 (327)
                        +...+.+++|+|+|++|++++ ||.|++||.+ ++....+. +       ...+.+++|+++..+++  ...+|    
T Consensus       191 --~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~  267 (434)
T 2oit_A          191 --STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET  267 (434)
T ss_dssp             --GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred             --CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence              244599999999999999987 9999999998 55555443 2       22789999999855442  22333    


Q ss_pred             --cEEEEEcCCC
Q psy7482         207 --AITAYNLTDG  216 (327)
Q Consensus       207 --~i~i~d~~~~  216 (327)
                        .+++|+++..
T Consensus       268 ~~~v~i~~l~~~  279 (434)
T 2oit_A          268 SPDVVMALLPKK  279 (434)
T ss_dssp             CCEEEEEECCCT
T ss_pred             CCceEEEEeccC
Confidence              3899999865

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.93  E-value=1.7e-24  Score=195.08  Aligned_cols=299  Identities=11%  Similarity=0.106  Sum_probs=199.7

Q ss_pred             EEEe--CCCEEEEecCCCeEEEEEccccccccccccccc---cEEEEEECCCCCeEEEecC---------CCcEEEEEcC
Q psy7482          19 SVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPEGSHLISCSD---------DGSIAIFRVG   84 (327)
Q Consensus        19 ~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~i~iw~~~   84 (327)
                      +++|  ++++++++ .|+.|++||+.+++....+..|..   .+.+++|+|||++|++++.         ++.|++||+.
T Consensus        20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~   98 (719)
T 1z68_A           20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS   98 (719)
T ss_dssp             CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred             ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence            5667  77665554 599999999999987766665544   3899999999999998876         7899999999


Q ss_pred             CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC----ccc---------cceEEE
Q psy7482          85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG----VGF---------ENLDSV  151 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~---------~~v~~~  151 (327)
                      +++..... . .... +..++|+|||+.|+.+. ++.|++||+.+++...........    .+.         ....++
T Consensus        99 ~g~~~~~~-~-l~~~-~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~  174 (719)
T 1z68_A           99 NGEFVRGN-E-LPRP-IQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL  174 (719)
T ss_dssp             TTEECCSS-C-CCSS-BCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred             CCccccce-e-cCcc-cccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence            98763211 1 1134 88999999999999885 789999999888764432111110    000         112589


Q ss_pred             EEccCCcEEEeec-CC----------------------------------eEEEEEecCCcee--eEe-------cCCCc
Q psy7482         152 VWSPEGLLYAIPI-QN----------------------------------KAVVFSVEKAGVL--QTL-------KSESK  187 (327)
Q Consensus       152 ~~~~~~~~l~~~~-~~----------------------------------~i~i~d~~~~~~~--~~~-------~~~~~  187 (327)
                      +|+|||+.|+.++ +.                                  .|++||+.+++..  ..+       .+...
T Consensus       175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~  254 (719)
T 1z68_A          175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY  254 (719)
T ss_dssp             EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred             EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence            9999999998875 31                                  7889999887753  111       25667


Q ss_pred             eeEEEeecCceE-EEeCC--C--CcEEEEE----cCCCceeEEe----eecccceE-----EEEEEecCCCcEEEE--ec
Q psy7482         188 VHSVCFLNETTV-CTGNE--E--SAITAYN----LTDGSHLWQI----KASASRIK-----GLVFFSIPQETTVCT--GN  247 (327)
Q Consensus       188 i~~~~~~~~~~l-~~~~~--d--~~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~~~s~~~~~l~~--~~  247 (327)
                      +..++|+||+.+ ++...  +  ..|.+||    ..+++....+    ..|...+.     .+.|  +|+|+.++.  +.
T Consensus       255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~  332 (719)
T 1z68_A          255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVF--SYDAISYYKIFSD  332 (719)
T ss_dssp             EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEE--CTTSSCEEEEEEC
T ss_pred             EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEE--CCCCCeEEEEEEc
Confidence            899999999544 44222  2  3488899    7777665555    35666666     7888  499986544  44


Q ss_pred             CCC--eEEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEec-----CCcEEEEEccCccCC-Cceeeee-c-CCCCc
Q psy7482         248 EES--AITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITS-----AGDLVVWELNEDVTR-EPQRVSA-T-NDGCR  316 (327)
Q Consensus       248 ~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~-----dg~v~iw~~~~~~~~-~~~~~~~-~-~~~~~  316 (327)
                      .+|  .|.+||+.+++ ...+..+...+..+.+.. +.|+..+.     ++..++|.++..... .+..+.. . .+...
T Consensus       333 ~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~  411 (719)
T 1z68_A          333 KDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQ  411 (719)
T ss_dssp             TTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBC
T ss_pred             cCCceEEEEEECCCCc-eEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCc
Confidence            555  57777877666 445555555566655446 55554444     488999998763111 1222211 1 13345


Q ss_pred             eEEEEeCCC
Q psy7482         317 FTCLAIRPP  325 (327)
Q Consensus       317 i~~l~~~p~  325 (327)
                      +..+.|+|+
T Consensus       412 ~~~~~~s~d  420 (719)
T 1z68_A          412 YYTASFSDY  420 (719)
T ss_dssp             BEEEEECGG
T ss_pred             eEEEEECCC
Confidence            667777775

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.93  E-value=2.6e-24  Score=194.03  Aligned_cols=258  Identities=12%  Similarity=0.118  Sum_probs=184.6

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC--ceeeEEEecCCCEEEEEeCC---------CCEEE
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT--AVNHISIHPSGKLALSVGKD---------KTLRT  124 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d---------g~i~i  124 (327)
                      .+.+++|+|||+++++ +.||+|++||+.+++....+ ..+...  .|.+++|+|||++|++++.+         +.+.+
T Consensus        18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~-~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~   95 (723)
T 1xfd_A           18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLI-EGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL   95 (723)
T ss_dssp             CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEE-CTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred             cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEe-ccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence            4678899999997766 78999999999998877666 544431  28999999999999999764         67889


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCc----------------
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESK----------------  187 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~----------------  187 (327)
                      ||+.+++....   .....+...+..++|+|||+.++.++++.|++||+.+++...... +...                
T Consensus        96 ~d~~~~~~~~l---~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~  172 (723)
T 1xfd_A           96 SKIPHGDPQSL---DPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL  172 (723)
T ss_dssp             EESSSCCCEEC---CCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred             EECCCCceEec---cCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence            99998875222   222222334788999999999999998999999999887766554 2322                


Q ss_pred             --eeEEEeecC-ceEEEeCCCC----------------------------------cEEEEEcCCCceeEEeeec-----
Q psy7482         188 --VHSVCFLNE-TTVCTGNEES----------------------------------AITAYNLTDGSHLWQIKAS-----  225 (327)
Q Consensus       188 --i~~~~~~~~-~~l~~~~~d~----------------------------------~i~i~d~~~~~~~~~~~~~-----  225 (327)
                        +.+++|+|| +.|++++.++                                  .|++||+.+++....+..+     
T Consensus       173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~  252 (723)
T 1xfd_A          173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM  252 (723)
T ss_dssp             SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred             cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence              378999999 6777765432                                  7999999988765566544     


Q ss_pred             -ccceEEEEEEecCCCcEEEEec----CCCeEEEEEcCCCceeEEeecc-cCce----EEEeeeC--cEEEE--EecCC-
Q psy7482         226 -ASRIKGLVFFSIPQETTVCTGN----EESAITAYNLTDGSHLWHIKAS-ASRI----KGLASHR--NHLIC--ITSAG-  290 (327)
Q Consensus       226 -~~~v~~~~~~~s~~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~-~~~v----~~~~~~~--~~l~~--~~~dg-  290 (327)
                       ...+..++|  +|||+++++.+    .+..|++||+.+++....+..+ ...+    ..++|+|  +.|+.  +..++ 
T Consensus       253 ~~~~~~~~~~--SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~  330 (723)
T 1xfd_A          253 REYYITMVKW--ATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGG  330 (723)
T ss_dssp             SSEEEEEEEE--SSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSS
T ss_pred             ccceeEEEEE--eCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCC
Confidence             567889999  59999887654    3367999999999876665443 3333    3789999  54553  45666 


Q ss_pred             -----cEEEEEc-cCccCCC---ceeeeecCCCCceEE-EEeCCC
Q psy7482         291 -----DLVVWEL-NEDVTRE---PQRVSATNDGCRFTC-LAIRPP  325 (327)
Q Consensus       291 -----~v~iw~~-~~~~~~~---~~~~~~~~~~~~i~~-l~~~p~  325 (327)
                           .|.+||+ ..+   .   ...+.  .....+.. ++|+|+
T Consensus       331 ~~~~~~l~~~d~~~~~---~~~~~~~l~--~~~~~~~~~~~~spd  370 (723)
T 1xfd_A          331 RGKFYHITVSSSQPNS---SNDNIQSIT--SGDWDVTKILAYDEK  370 (723)
T ss_dssp             SSCEEEEEEECSSCCS---SSCCCCBSC--CSSSCEEEEEEEETT
T ss_pred             CcceeEEEEEeccCCC---CccceeEee--cCCeEEEeeeEEcCC
Confidence                 4566663 333   2   22232  12233444 688887

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.92  E-value=1.2e-23  Score=184.98  Aligned_cols=246  Identities=9%  Similarity=0.065  Sum_probs=182.9

Q ss_pred             ccccEEEEEECCCCCeEEEecC-CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC---CCCEEEEEcC
Q psy7482          53 HEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK---DKTLRTWNLV  128 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~  128 (327)
                      +..+|.+++|+|||+.||+++. ||++.||++..++... + ..+....+..+.|+|| +.+++++.   +....+|.+.
T Consensus        20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-l-t~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~   96 (582)
T 3o4h_A           20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-L-NREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN   96 (582)
T ss_dssp             HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-C-CSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred             hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-e-ecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence            3567999999999999998887 9999999997766544 3 3444223999999999 77777765   4556676554


Q ss_pred             C---CceeeeeeccccCccccceEEEEEccCCc--EEEeecCCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEe
Q psy7482         129 K---GRSAYITNLSSYGVGFENLDSVVWSPEGL--LYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTG  202 (327)
Q Consensus       129 ~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~  202 (327)
                      .   +... .  +....    .....+|+|+++  .++++.++.+.+||+.+++......+..  .+++|+|| ..++++
T Consensus        97 ~~~~g~~~-~--l~~~~----~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~  167 (582)
T 3o4h_A           97 TSRPGEEQ-R--LEAVK----PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGL  167 (582)
T ss_dssp             TTSTTCCE-E--CTTSC----SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEE
T ss_pred             ccCCCccc-c--ccCCC----CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEE
Confidence            3   2222 1  21111    144567888775  4455556666799999887766555444  88999999 677766


Q ss_pred             CCC----CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC--eEEEEEcCCCceeEEeecccCceEEE
Q psy7482         203 NEE----SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES--AITAYNLTDGSHLWHIKASASRIKGL  276 (327)
Q Consensus       203 ~~d----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~  276 (327)
                      +.+    +.|++||+.+++.. .+..|...+..++|  +|||+.|+++..++  .|++||+.+++.. .+..|...+..+
T Consensus       168 ~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~--SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~  243 (582)
T 3o4h_A          168 GFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASI--SPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSY  243 (582)
T ss_dssp             EEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEE--CTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHH
T ss_pred             EEcCCCCeEEEEEcCCCCCce-EeecCCCccccceE--CCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhh
Confidence            666    78999999887654 66778888999999  59999999888888  8999999998877 777888778778


Q ss_pred             e--------eeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeC
Q psy7482         277 A--------SHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIR  323 (327)
Q Consensus       277 ~--------~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~  323 (327)
                      +        |+|  .++++++.||.+++|++  +.   ...    .....+.+++|+
T Consensus       244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~---~~~----~~~~~v~~~~~s  291 (582)
T 3o4h_A          244 RPTAITWLGYLPDGRLAVVARREGRSAVFID--GE---RVE----APQGNHGRVVLW  291 (582)
T ss_dssp             CCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE---EEC----CCSSEEEEEEEE
T ss_pred             hhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC---eec----cCCCceEEEEec
Confidence            8        999  78899999999999999  41   111    223457777776

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.92  E-value=7.6e-22  Score=163.48  Aligned_cols=270  Identities=10%  Similarity=0.043  Sum_probs=180.4

Q ss_pred             EEEEecCC--CeEEEEEc--ccccccc--ccc-cccccEEEEEECCCCCeEEEecCCCcEEEEEcC-CCeEEEeEEeccc
Q psy7482          26 LAASSGAD--ETVVLYDM--VKRKQSG--ALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG-SWQLEKLFKKAHK   97 (327)
Q Consensus        26 ~l~~~~~d--g~v~~w~~--~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~-~~~~~~~~~~~~~   97 (327)
                      +++.|+..  +.|.+|++  .+++...  ... .....+..++|+|++++|++++.+ .|.+|++. +++..........
T Consensus         4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~   82 (365)
T 1jof_A            4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG   82 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred             EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence            34555542  56888765  3454321  111 233467889999999999998888 99999997 7776544311111


Q ss_pred             CCceeeEEEecCCCE--EEEEe-------------CCCCEEEEEcC-CCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          98 GTAVNHISIHPSGKL--ALSVG-------------KDKTLRTWNLV-KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        98 ~~~v~~~~~~~~~~~--l~~~~-------------~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      +. +.+++|+|++++  ++++.             .+|.+.+|++. +++.......... .+...+.+++|+|+|++++
T Consensus        83 g~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~spdG~~l~  160 (365)
T 1jof_A           83 GH-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY-QENTGIHGMVFDPTETYLY  160 (365)
T ss_dssp             SS-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC-CTTCCEEEEEECTTSSEEE
T ss_pred             CC-CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe-CCCCcceEEEECCCCCEEE
Confidence            33 667899999984  44543             68999999997 4554333221100 0123388999999999887


Q ss_pred             eec--CCeEEEEEec-CCcee--eEec---CCCceeEEEeecC-ceEEEeC-CCCcEEEEEcC--CCcee---EEee---
Q psy7482         162 IPI--QNKAVVFSVE-KAGVL--QTLK---SESKVHSVCFLNE-TTVCTGN-EESAITAYNLT--DGSHL---WQIK---  223 (327)
Q Consensus       162 ~~~--~~~i~i~d~~-~~~~~--~~~~---~~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~~--~~~~~---~~~~---  223 (327)
                      ++.  ++.|++||+. +++..  ..+.   +...+..++|+|+ +++++++ .++.|.+|++.  +++..   ..+.   
T Consensus       161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~  240 (365)
T 1jof_A          161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIP  240 (365)
T ss_dssp             EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSC
T ss_pred             EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCC
Confidence            764  6799999998 66643  2333   2567899999999 5666655 57899999875  45432   1221   


Q ss_pred             ----eccc------ceEEEE-EEecCCCcEEEEecCCC------eEEEEEcC-CCceeE---EeecccCceEEEeeeC--
Q psy7482         224 ----ASAS------RIKGLV-FFSIPQETTVCTGNEES------AITAYNLT-DGSHLW---HIKASASRIKGLASHR--  280 (327)
Q Consensus       224 ----~~~~------~v~~~~-~~~s~~~~~l~~~~~d~------~i~i~d~~-~~~~~~---~~~~~~~~v~~~~~~~--  280 (327)
                          +|..      .+..++ |  +|+|++|++++.+.      .|.+|++. +++...   ....+...+..++|+|  
T Consensus       241 ~~~~g~~~~~~~~~~~~~i~~~--spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~  318 (365)
T 1jof_A          241 PGIPDRDPETGKGLYRADVCAL--TFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCP  318 (365)
T ss_dssp             TTCCCBCTTTSSBSEEEEEEEE--CTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred             CCcCCcccccccccccccEEEE--CCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCC
Confidence                1221      477888 7  59999988765432      89999996 565443   2333445567788876  


Q ss_pred             ---cEEEEEecC-CcEEEEEccCc
Q psy7482         281 ---NHLICITSA-GDLVVWELNED  300 (327)
Q Consensus       281 ---~~l~~~~~d-g~v~iw~~~~~  300 (327)
                         ++|++++.+ +.|.+|+++..
T Consensus       319 ~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          319 WSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             TCTTEEEEECSSSCEEEEEEEETT
T ss_pred             cCCCEEEEEEcCCCeEEEEEEchh
Confidence               678888764 89999999876

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.92  E-value=2.2e-21  Score=160.14  Aligned_cols=285  Identities=9%  Similarity=0.077  Sum_probs=200.3

Q ss_pred             CCCEEEEec------CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCC
Q psy7482          23 TSKLAASSG------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSW   86 (327)
Q Consensus        23 ~~~~l~~~~------~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~   86 (327)
                      +++++++..      .|+.|.+||..+++.+..+..+..+  .++|+||+++++++.          .++.|.+||..++
T Consensus        14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~   91 (361)
T 2oiz_A           14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL   91 (361)
T ss_dssp             GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred             CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence            555555442      4789999999999988888776665  899999999999886          3567999999999


Q ss_pred             eEEEeEEec-----ccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeee-eeccccCccccceEEEEEccCC-
Q psy7482          87 QLEKLFKKA-----HKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYI-TNLSSYGVGFENLDSVVWSPEG-  157 (327)
Q Consensus        87 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~-  157 (327)
                      +....+...     +... ...++++|+|++|+++..  ++.|.+||+.+++.+.. +....       ...+.+.|++ 
T Consensus        92 ~~~~~i~~~~~~~~~g~~-p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-------~~~v~~~p~~~  163 (361)
T 2oiz_A           92 TFEKEISLPPKRVQGLNY-DGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-------CWSVIPQPNRP  163 (361)
T ss_dssp             CEEEEEEECTTBCCBCCC-GGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-------EEEEEECTTSS
T ss_pred             cEEEEEEcCccccccCCC-cceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-------cceeEEcCCCC
Confidence            888887332     1223 778999999999998874  57899999999876554 33221       2335667765 


Q ss_pred             cEEEe-ecCCeEEEEEecC-CceeeE------ecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce--eEEeeec-
Q psy7482         158 LLYAI-PIQNKAVVFSVEK-AGVLQT------LKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH--LWQIKAS-  225 (327)
Q Consensus       158 ~~l~~-~~~~~i~i~d~~~-~~~~~~------~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~-  225 (327)
                      ..+++ +.||.+.+++... ++....      +........+.++++ ..++..+.++.+.++|+.....  ...+... 
T Consensus       164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~  243 (361)
T 2oiz_A          164 RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLN  243 (361)
T ss_dssp             SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCC
T ss_pred             eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccC
Confidence            34443 4489999898865 444311      111111223334555 4556666789999999875532  1221110 


Q ss_pred             -----c----cceEEEEEEecCCCcEEEEecC-----------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEE
Q psy7482         226 -----A----SRIKGLVFFSIPQETTVCTGNE-----------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHL  283 (327)
Q Consensus       226 -----~----~~v~~~~~~~s~~~~~l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l  283 (327)
                           .    .....++++  |+++.++++..           .+.|.+||+.+++.+.++..+.  +.+++|+|  ++|
T Consensus       244 ~~~~~~~~~p~g~~~~a~~--~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l  319 (361)
T 2oiz_A          244 DEDKAKNWVPGGYNLVGLH--RASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLM  319 (361)
T ss_dssp             HHHHHTTCEECCSSCEEEE--TTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEE
T ss_pred             ccccccccccCCeeEEEEe--cCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEE
Confidence                 0    111226774  88777766532           3589999999999999999887  89999999  788


Q ss_pred             EEEecCCcEEEEEccCccCCCceeeee-cCCCCceEEEEeCCC
Q psy7482         284 ICITSAGDLVVWELNEDVTREPQRVSA-TNDGCRFTCLAIRPP  325 (327)
Q Consensus       284 ~~~~~dg~v~iw~~~~~~~~~~~~~~~-~~~~~~i~~l~~~p~  325 (327)
                      ++++. +.|.+||..++   .++.+.. ...+.....++++|+
T Consensus       320 ~v~n~-~~v~v~D~~t~---~l~~~~~i~~~G~~P~~~~~~p~  358 (361)
T 2oiz_A          320 LTLDG-GNVNVYDISQP---EPKLLRTIEGAAEASLQVQFHPV  358 (361)
T ss_dssp             EEECS-SCEEEEECSSS---SCEEEEEETTSCSSEEEEEECCC
T ss_pred             EEeCC-CeEEEEECCCC---cceeeEEeccCCCCcEEEEecCC
Confidence            87776 99999999887   4555555 356778899999997

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.91  E-value=6.1e-21  Score=157.88  Aligned_cols=258  Identities=11%  Similarity=0.154  Sum_probs=171.8

Q ss_pred             CCccEEEEEe--CCCEEEEecCC----CeEEEEEccc--cc--cccccccccccEEEEEECCCCCeEEEec-CCCcEEEE
Q psy7482          13 HTASVRSVAA--TSKLAASSGAD----ETVVLYDMVK--RK--QSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIF   81 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~d----g~v~~w~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw   81 (327)
                      |...+..++|  ++++|++++.+    +.|.+|++..  ++  .+.....+......+++  ++++|++++ .++.|.+|
T Consensus        48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~  125 (361)
T 3scy_A           48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF  125 (361)
T ss_dssp             ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred             cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence            5566666777  89989988875    7999999865  33  23333335556777888  777777665 57899999


Q ss_pred             EcCCCeEEEeEE--eccc----------CCceeeEEEecCCCEEEEEe-CCCCEEEEEcCCCce------e------eee
Q psy7482          82 RVGSWQLEKLFK--KAHK----------GTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRS------A------YIT  136 (327)
Q Consensus        82 ~~~~~~~~~~~~--~~~~----------~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~------~------~~~  136 (327)
                      ++.....+..+.  ..+.          ...+.+++|+|+++++++++ .++.|.+|++.....      +      ...
T Consensus       126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~  205 (361)
T 3scy_A          126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF  205 (361)
T ss_dssp             EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred             EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence            997543222110  0111          11157899999999776665 478999999875442      1      111


Q ss_pred             eccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCce--eeEec----CCCceeEEEeecC-ceEEEeCC--C
Q psy7482         137 NLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGV--LQTLK----SESKVHSVCFLNE-TTVCTGNE--E  205 (327)
Q Consensus       137 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~--~~~~~----~~~~i~~~~~~~~-~~l~~~~~--d  205 (327)
                      ....    ...+..++|+|++++++++.  ++.|.+||+.+++.  +..+.    +......++|+|| ++|+++..  +
T Consensus       206 ~~~~----~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~  281 (361)
T 3scy_A          206 KVAP----GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA  281 (361)
T ss_dssp             ECCT----TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred             ecCC----CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence            1111    12378999999999776654  89999999987754  22232    2345689999999 55655544  5


Q ss_pred             CcEEEEEcC--CCc--eeEEeeecccceEEEEEEecCCCcEEEEec-CCCeEEEEEc--CCCceeEEe-ecccCceEEEe
Q psy7482         206 SAITAYNLT--DGS--HLWQIKASASRIKGLVFFSIPQETTVCTGN-EESAITAYNL--TDGSHLWHI-KASASRIKGLA  277 (327)
Q Consensus       206 ~~i~i~d~~--~~~--~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~--~~~~~~~~~-~~~~~~v~~~~  277 (327)
                      +.|.+|++.  +++  .+..+.. ...+..++|  +|+|++|++++ .++.|.+|++  .+++..... ..+...+.++.
T Consensus       282 ~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~--spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~  358 (361)
T 3scy_A          282 DGVAIFKVDETNGTLTKVGYQLT-GIHPRNFII--TPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLK  358 (361)
T ss_dssp             CEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEE--CTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEE
T ss_pred             CEEEEEEEcCCCCcEEEeeEecC-CCCCceEEE--CCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEE
Confidence            899999996  344  3444443 446788999  59999888876 6789999655  466654433 22345678888


Q ss_pred             ee
Q psy7482         278 SH  279 (327)
Q Consensus       278 ~~  279 (327)
                      |.
T Consensus       359 ~~  360 (361)
T 3scy_A          359 FV  360 (361)
T ss_dssp             EE
T ss_pred             Ec
Confidence            75

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.91  E-value=4.4e-22  Score=166.32  Aligned_cols=281  Identities=8%  Similarity=0.074  Sum_probs=190.0

Q ss_pred             eeccCCccEEE-----EEe--CCCEEEEecC-CC--eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcE
Q psy7482           9 VTHSHTASVRS-----VAA--TSKLAASSGA-DE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI   78 (327)
Q Consensus         9 ~~~~h~~~v~~-----~~~--~~~~l~~~~~-dg--~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i   78 (327)
                      .+..|......     .+|  ||++|+.++. +|  .|.+||+.+++......++...+..+.|+||++.|+.++.++.|
T Consensus        25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l  104 (388)
T 3pe7_A           25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNL  104 (388)
T ss_dssp             ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEE
T ss_pred             EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeE
Confidence            34456655555     556  8998888876 66  48888999888877777676666677899999999999999999


Q ss_pred             EEEEcCCCeEEEeEEecccCCceeeEE--EecCCCEEEEEe----------------------CCCCEEEEEcCCCceee
Q psy7482          79 AIFRVGSWQLEKLFKKAHKGTAVNHIS--IHPSGKLALSVG----------------------KDKTLRTWNLVKGRSAY  134 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~~----------------------~dg~i~iwd~~~~~~~~  134 (327)
                      ++||+.+++..... ..+... +....  +++++++++...                      .+..|.+||+.+++...
T Consensus       105 ~~~d~~~g~~~~~~-~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~  182 (388)
T 3pe7_A          105 MRVDLATLEENVVY-QVPAEW-VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV  182 (388)
T ss_dssp             EEEETTTCCEEEEE-ECCTTE-EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE
T ss_pred             EEEECCCCcceeee-echhhc-ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE
Confidence            99999998876665 444443 43333  478998887432                      34679999999887655


Q ss_pred             eeeccccCccccceEEEEEcc-CCcEEEeec-C------CeEEEEEecCCceeeEecCC--CceeEEEeecC-ceEEEeC
Q psy7482         135 ITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-Q------NKAVVFSVEKAGVLQTLKSE--SKVHSVCFLNE-TTVCTGN  203 (327)
Q Consensus       135 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~------~~i~i~d~~~~~~~~~~~~~--~~i~~~~~~~~-~~l~~~~  203 (327)
                      ......      .+..+.|+| +++.++... +      ..|.++|...++......+.  ..+....|+|| ..|+..+
T Consensus       183 l~~~~~------~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~  256 (388)
T 3pe7_A          183 ILQENQ------WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVS  256 (388)
T ss_dssp             EEEESS------CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred             eecCCc------cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEe
Confidence            443332      288999999 999887665 2      26778887665543333333  35778899999 5454432


Q ss_pred             -CC----CcEEEEEcCCCcee--EEeeecccc---eEEEEEEecCCCcEEEEe---------cCCCeEEEEEcCCCceeE
Q psy7482         204 -EE----SAITAYNLTDGSHL--WQIKASASR---IKGLVFFSIPQETTVCTG---------NEESAITAYNLTDGSHLW  264 (327)
Q Consensus       204 -~d----~~i~i~d~~~~~~~--~~~~~~~~~---v~~~~~~~s~~~~~l~~~---------~~d~~i~i~d~~~~~~~~  264 (327)
                       .+    ..|++||+.+++..  ..+..+...   ...+.|+  |+|+.|+..         ..+..|++||+.+++. .
T Consensus       257 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~s--pdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~  333 (388)
T 3pe7_A          257 YLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMV--GDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-H  333 (388)
T ss_dssp             EETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEE--EEECCC------------CCCCEEEEEETTTTEE-E
T ss_pred             cCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEc--cCCCcceeEeeeccccccCCCCEEEEEeccCCce-E
Confidence             22    23999999988743  223221110   1123564  889888754         4567899999988764 4


Q ss_pred             EeecccC-----------ceEEEeeeC--cEEEE-EecCCcEEEEEccCc
Q psy7482         265 HIKASAS-----------RIKGLASHR--NHLIC-ITSAGDLVVWELNED  300 (327)
Q Consensus       265 ~~~~~~~-----------~v~~~~~~~--~~l~~-~~~dg~v~iw~~~~~  300 (327)
                      .+..+..           .+..++|+|  +.|+. +..+|...+|.++-.
T Consensus       334 ~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~  383 (388)
T 3pe7_A          334 RVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP  383 (388)
T ss_dssp             EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred             EeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence            4555554           578889999  55554 445787777776544

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.91  E-value=1.6e-22  Score=170.72  Aligned_cols=196  Identities=13%  Similarity=0.109  Sum_probs=147.8

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCce--------eeeeeccc--cCccccceEEEEEccCCcEEE----eec-C
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRS--------AYITNLSS--YGVGFENLDSVVWSPEGLLYA----IPI-Q  165 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--------~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~----~~~-~  165 (327)
                      ++.+++++++.++++++.++ +++|+......        ........  .-.+...+.+++|+|++++|+    +++ |
T Consensus        39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d  117 (434)
T 2oit_A           39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG  117 (434)
T ss_dssp             CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred             ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence            88999999999999999888 99987542110        00000000  001123599999999999998    565 8


Q ss_pred             CeEEEEEecCC--------cee---eEec-CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEE
Q psy7482         166 NKAVVFSVEKA--------GVL---QTLK-SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKG  231 (327)
Q Consensus       166 ~~i~i~d~~~~--------~~~---~~~~-~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~  231 (327)
                      +.|++||++++        +.+   ..+. |...|.+++|+|+  .++++++.||.|++||++++..+....+|...+.+
T Consensus       118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~  197 (434)
T 2oit_A          118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTS  197 (434)
T ss_dssp             EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEE
T ss_pred             ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeE
Confidence            99999998765        222   2233 6789999999996  68999999999999999998777677788999999


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc-------CceEEEeeeC--cEEEE-EecCCc------EEEE
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA-------SRIKGLASHR--NHLIC-ITSAGD------LVVW  295 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------~~v~~~~~~~--~~l~~-~~~dg~------v~iw  295 (327)
                      ++|+  |+|++|++|+.||.|++||++ ++....+..|.       ..|.+++|++  .++++ .+.||.      +++|
T Consensus       198 v~ws--pdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~  274 (434)
T 2oit_A          198 VCWS--PKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMA  274 (434)
T ss_dssp             EEEC--TTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEE
T ss_pred             EEEc--CCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEE
Confidence            9995  899999999999999999998 56555555442       3899999999  33322 334433      8999


Q ss_pred             EccCc
Q psy7482         296 ELNED  300 (327)
Q Consensus       296 ~~~~~  300 (327)
                      ++...
T Consensus       275 ~l~~~  279 (434)
T 2oit_A          275 LLPKK  279 (434)
T ss_dssp             ECCCT
T ss_pred             EeccC
Confidence            99865

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.90  E-value=4.5e-22  Score=179.59  Aligned_cols=304  Identities=12%  Similarity=0.133  Sum_probs=197.2

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEcccccccccccccccc-----EEEEEECCCCCeEEEecCC---------Cc
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT-----ITCLKFTPEGSHLISCSDD---------GS   77 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------~~   77 (327)
                      .....+++|  ++++++++  |+.|++||+.+++....+.+|...     ...++|||||++|+.++.+         +.
T Consensus        16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~   93 (740)
T 4a5s_A           16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS   93 (740)
T ss_dssp             CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred             cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence            344667888  88888886  899999999999877666666532     2447899999999988876         56


Q ss_pred             EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCc----c---------
Q psy7482          78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV----G---------  144 (327)
Q Consensus        78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~---------  144 (327)
                      +.+||+.+++... + ..+... +...+|+|||+.|+.+. ++.|++|++.+++............    .         
T Consensus        94 ~~~~d~~~~~~~~-l-~~~~~~-~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~  169 (740)
T 4a5s_A           94 YDIYDLNKRQLIT-E-ERIPNN-TQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV  169 (740)
T ss_dssp             EEEEETTTTEECC-S-SCCCTT-EEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred             EEEEECCCCcEEE-c-ccCCCc-ceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence            7799999988654 3 455555 99999999999999885 6899999998877544322111100    0         


Q ss_pred             ccceEEEEEccCCcEEEeec--CC-----------------------------------eEEEEEecC---Cc--eeeEe
Q psy7482         145 FENLDSVVWSPEGLLYAIPI--QN-----------------------------------KAVVFSVEK---AG--VLQTL  182 (327)
Q Consensus       145 ~~~v~~~~~~~~~~~l~~~~--~~-----------------------------------~i~i~d~~~---~~--~~~~~  182 (327)
                      ......+.|||||+.|+...  ++                                   .|++||+.+   ++  ....+
T Consensus       170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l  249 (740)
T 4a5s_A          170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI  249 (740)
T ss_dssp             SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred             cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence            01124589999999888763  11                                   578899888   63  22223


Q ss_pred             c-------CCCceeEEEeecCce-EEEe----CCCCcEEEEEcCCCc----e--eEEe--eecccceE-----EEEEEec
Q psy7482         183 K-------SESKVHSVCFLNETT-VCTG----NEESAITAYNLTDGS----H--LWQI--KASASRIK-----GLVFFSI  237 (327)
Q Consensus       183 ~-------~~~~i~~~~~~~~~~-l~~~----~~d~~i~i~d~~~~~----~--~~~~--~~~~~~v~-----~~~~~~s  237 (327)
                      .       +...+..++|+||+. ++..    ..+..|.+||+.+++    +  +..+  ..|...+.     ...|  +
T Consensus       250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f--s  327 (740)
T 4a5s_A          250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF--T  327 (740)
T ss_dssp             CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE--C
T ss_pred             cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE--c
Confidence            2       455688999999954 4332    234479999999887    2  2222  34555444     6778  5


Q ss_pred             CCCcEEE-EecC-C--CeEEEEEcCCCceeEEeecccCceEEEe-eeC-cEEEEEec----CCcEEEEEccCccCCCcee
Q psy7482         238 PQETTVC-TGNE-E--SAITAYNLTDGSHLWHIKASASRIKGLA-SHR-NHLICITS----AGDLVVWELNEDVTREPQR  307 (327)
Q Consensus       238 ~~~~~l~-~~~~-d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~-~~~-~~l~~~~~----dg~v~iw~~~~~~~~~~~~  307 (327)
                      |||+.++ ..+. +  ..|++||+.+++...... ....+..+. ++. .++++++.    .+...||.++.........
T Consensus       328 pDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~-g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~  406 (740)
T 4a5s_A          328 LDGNSFYKIISNEEGYRHICYFQIDKKDCTFITK-GTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTC  406 (740)
T ss_dssp             TTSSEEEEEEECTTSCEEEEEEETTCSSCEESCC-SSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEE
T ss_pred             CCCCEEEEEEEcCCCceEEEEEECCCCceEeccc-CCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCccee
Confidence            9999876 5543 3  468889987766544333 344455443 445 44555554    3456666655432111112


Q ss_pred             eeec--CCCCceEEEEeCCCC
Q psy7482         308 VSAT--NDGCRFTCLAIRPPV  326 (327)
Q Consensus       308 ~~~~--~~~~~i~~l~~~p~~  326 (327)
                      +...  ..........|+|+.
T Consensus       407 lt~~~~~~~~~~~~~~~S~dg  427 (740)
T 4a5s_A          407 LSCELNPERCQYYSVSFSKEA  427 (740)
T ss_dssp             SSTTTSTTTBCBEEEEECTTS
T ss_pred             eccccCCCCCceEEEEECCCC
Confidence            2111  123567788888863

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.90  E-value=2.4e-21  Score=161.87  Aligned_cols=276  Identities=12%  Similarity=0.083  Sum_probs=187.5

Q ss_pred             EEEccccccccccccccccEEE-----EEECCCCCeEEEecC-CC--cEEEEEcCCCeEEEeEEecccCCceeeEEEecC
Q psy7482          38 LYDMVKRKQSGALMQHEGTITC-----LKFTPEGSHLISCSD-DG--SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS  109 (327)
Q Consensus        38 ~w~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~-d~--~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~  109 (327)
                      .+|..++.....+..|......     .+|+|||++|+.++. ++  .|.+||+.+++..... ..+... +..+.|+||
T Consensus        14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt-~~~~~~-~~~~~~spd   91 (388)
T 3pe7_A           14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT-EGRGDN-TFGGFLSPD   91 (388)
T ss_dssp             EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC-CSSCBC-SSSCEECTT
T ss_pred             EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee-eCCCCC-ccceEEcCC
Confidence            4566777777777777766666     889999999998887 66  4888899988876655 444443 557789999


Q ss_pred             CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEE--EEEccCCcEEEee-----------------------c
Q psy7482         110 GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDS--VVWSPEGLLYAIP-----------------------I  164 (327)
Q Consensus       110 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~-----------------------~  164 (327)
                      ++.|+.++.++.|++||+.+++.......+..     .+..  ..++|++++++..                       .
T Consensus        92 g~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~-----~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (388)
T 3pe7_A           92 DDALFYVKDGRNLMRVDLATLEENVVYQVPAE-----WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKP  166 (388)
T ss_dssp             SSEEEEEETTTEEEEEETTTCCEEEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred             CCEEEEEeCCCeEEEEECCCCcceeeeechhh-----cccccceeECCCCCeeccccccCcccccccccchhhhhhccCC
Confidence            99999999999999999999887665544432     1322  3458999888732                       2


Q ss_pred             CCeEEEEEecCCceeeEecCCCceeEEEeec-C-ceEEEeCC------CCcEEEEEcCCCceeEEeeecc--cceEEEEE
Q psy7482         165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLN-E-TTVCTGNE------ESAITAYNLTDGSHLWQIKASA--SRIKGLVF  234 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~  234 (327)
                      +..|.+||+.+++......+...+..+.|+| + +.++....      ...|.++|...++. ..+..+.  ..+...+|
T Consensus       167 ~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~  245 (388)
T 3pe7_A          167 CCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFW  245 (388)
T ss_dssp             CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEE
T ss_pred             cceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceE
Confidence            4689999999988766666777899999999 8 55655443      33788888765543 3443343  35777888


Q ss_pred             EecCCCcEEEEecC-----CCeEEEEEcCCCce--eEEeecccCc---eEEEeeeC--cEEEEE---------ecCCcEE
Q psy7482         235 FSIPQETTVCTGNE-----ESAITAYNLTDGSH--LWHIKASASR---IKGLASHR--NHLICI---------TSAGDLV  293 (327)
Q Consensus       235 ~~s~~~~~l~~~~~-----d~~i~i~d~~~~~~--~~~~~~~~~~---v~~~~~~~--~~l~~~---------~~dg~v~  293 (327)
                        +|+|+.|+..+.     +..|++||+.+++.  +..+.++...   .....|+|  +.|+..         ..+..|+
T Consensus       246 --spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~  323 (388)
T 3pe7_A          246 --VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLY  323 (388)
T ss_dssp             --CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEE
T ss_pred             --CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEE
Confidence              599997765433     12499999998874  3333331111   12236888  555533         4466899


Q ss_pred             EEEccCccCCCceeeeecCCC---------CceEEEEeCCCC
Q psy7482         294 VWELNEDVTREPQRVSATNDG---------CRFTCLAIRPPV  326 (327)
Q Consensus       294 iw~~~~~~~~~~~~~~~~~~~---------~~i~~l~~~p~~  326 (327)
                      +||+..+   ....+......         ..+.+++|+|+.
T Consensus       324 ~~d~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg  362 (388)
T 3pe7_A          324 VFNMKNG---TQHRVARHDTSWKVFEGDRQVTHPHPSFTPDD  362 (388)
T ss_dssp             EEETTTT---EEEEEEECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred             EEeccCC---ceEEeccccCcccccccccccCCCCccCCCCC
Confidence            9999887   33334322210         046788899873

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.89  E-value=2.4e-22  Score=181.12  Aligned_cols=232  Identities=12%  Similarity=0.076  Sum_probs=167.9

Q ss_pred             EEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccC--CceeeEEEecCCCEEEEEeC---------CCCEEEEEc
Q psy7482          59 CLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG--TAVNHISIHPSGKLALSVGK---------DKTLRTWNL  127 (327)
Q Consensus        59 ~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~  127 (327)
                      .++|+|++++++++ .|+.|++||+.+++....+ ..+..  ..+.+++|+|||++|++++.         ++.|++||+
T Consensus        20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~   97 (719)
T 1z68_A           20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTIL-SNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL   97 (719)
T ss_dssp             CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEE-CHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred             ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEE-ccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence            68999999665554 6999999999999877666 44432  12889999999999998876         689999999


Q ss_pred             CCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec--CCCc-----------------e
Q psy7482         128 VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK--SESK-----------------V  188 (327)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~--~~~~-----------------i  188 (327)
                      .+++......+..      .+..++|+|||+.|+.+.++.|++||+.+++......  +...                 .
T Consensus        98 ~~g~~~~~~~l~~------~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~  171 (719)
T 1z68_A           98 SNGEFVRGNELPR------PIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK  171 (719)
T ss_dssp             TTTEECCSSCCCS------SBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred             CCCccccceecCc------ccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence            9887622122222      2888999999999999999999999998887654332  1121                 2


Q ss_pred             eEEEeecC-ceEEEeCCCC----------------------------------cEEEEEcCCCcee--------EEeeec
Q psy7482         189 HSVCFLNE-TTVCTGNEES----------------------------------AITAYNLTDGSHL--------WQIKAS  225 (327)
Q Consensus       189 ~~~~~~~~-~~l~~~~~d~----------------------------------~i~i~d~~~~~~~--------~~~~~~  225 (327)
                      .+++|+|| ..|++++.|.                                  .|++||+.+++..        ..+.+|
T Consensus       172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~  251 (719)
T 1z68_A          172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS  251 (719)
T ss_dssp             CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred             ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence            48999999 6787776442                                  7889999887642        123357


Q ss_pred             ccceEEEEEEecCCCcEEEEecCC----CeEEEEE----cCCCceeEEe----ecccCceE-----EEeeeC--cEEE--
Q psy7482         226 ASRIKGLVFFSIPQETTVCTGNEE----SAITAYN----LTDGSHLWHI----KASASRIK-----GLASHR--NHLI--  284 (327)
Q Consensus       226 ~~~v~~~~~~~s~~~~~l~~~~~d----~~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~~~--~~l~--  284 (327)
                      ...+..++|  +||++++++....    ..|.+||    +.+++....+    ..|...+.     .+.|+|  +.|+  
T Consensus       252 ~~~~~~~~~--SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~  329 (719)
T 1z68_A          252 DYYFSWLTW--VTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI  329 (719)
T ss_dssp             CEEEEEEEE--SSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred             cceEEEeEE--eCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence            778999999  4898877774322    3588899    7777765555    46666666     789999  4333  


Q ss_pred             EEecCCc--EEEEEccCc
Q psy7482         285 CITSAGD--LVVWELNED  300 (327)
Q Consensus       285 ~~~~dg~--v~iw~~~~~  300 (327)
                      +...+|.  |.+|++..+
T Consensus       330 ~~~~~g~~~l~~~~~~~~  347 (719)
T 1z68_A          330 FSDKDGYKHIHYIKDTVE  347 (719)
T ss_dssp             EECTTSCEEEEEESSCST
T ss_pred             EEccCCceEEEEEECCCC
Confidence            4556665  566666554

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.89  E-value=1.6e-20  Score=167.68  Aligned_cols=278  Identities=8%  Similarity=0.023  Sum_probs=186.8

Q ss_pred             ccCCccEEEEEeCCCE--EEEe--cCCCeEEEEEccccccccccccccccEE---------EEEEC--CCCCe-EEEecC
Q psy7482          11 HSHTASVRSVAATSKL--AASS--GADETVVLYDMVKRKQSGALMQHEGTIT---------CLKFT--PEGSH-LISCSD   74 (327)
Q Consensus        11 ~~h~~~v~~~~~~~~~--l~~~--~~dg~v~~w~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~~~   74 (327)
                      .+|...+..++++++.  +++.  +.++...||....+.....+..+...+.         ...|+  |||+. |+.++.
T Consensus        20 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~   99 (662)
T 3azo_A           20 ASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF   99 (662)
T ss_dssp             HHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred             hhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence            4688999999995544  4444  4588999999655555555666665555         55565  99998 776554


Q ss_pred             -CCcEEEEEcC--C-CeEEEeEEec-----ccCCceeeEEEecCCCEEEEEeCC----------CCEEEEEcCC------
Q psy7482          75 -DGSIAIFRVG--S-WQLEKLFKKA-----HKGTAVNHISIHPSGKLALSVGKD----------KTLRTWNLVK------  129 (327)
Q Consensus        75 -d~~i~iw~~~--~-~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~------  129 (327)
                       +..|.++++.  . ++ ...+ ..     +... +..++|+|||+.|++++.+          ..|++||+.+      
T Consensus       100 ~~~~l~~~~~~~~g~~~-~~~l-~~~~~~~~~~~-~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  176 (662)
T 3azo_A          100 GDQRLYAFEPDAPGGAV-PRPL-TPVSAVGGGLR-WADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR  176 (662)
T ss_dssp             TTCCEEEECTTSTTCCC-CEEC-SCCCCSTTCEE-EEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred             CCCeEEEEcCCCCCCCC-CEec-cCCccCCCCcc-ccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence             5667777765  2 43 3333 23     3344 8899999999999998876          5899999987      


Q ss_pred             CceeeeeeccccCccccceEEEEEccCCcEEEeec-C--------CeEEEEEec-CC---ceeeEec-CCCceeEEEeec
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q--------NKAVVFSVE-KA---GVLQTLK-SESKVHSVCFLN  195 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~--------~~i~i~d~~-~~---~~~~~~~-~~~~i~~~~~~~  195 (327)
                      ++..... . ..   ...+..++|+|||+.|+.++ +        ..|++||+. ++   +...... +...+..+.|+|
T Consensus       177 ~~~~~l~-~-~~---~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp  251 (662)
T 3azo_A          177 SAVRELS-D-DA---HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP  251 (662)
T ss_dssp             GGSEESS-C-SC---SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT
T ss_pred             CceeEEE-e-cC---CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC
Confidence            5443222 0 11   12377889999999888765 4        379999998 56   3333333 467899999999


Q ss_pred             C-ceEEEeCCCC--cEEEEEcCCCceeEEeeecccc--------eEEEEEEecCCCcEEEEecCCCeEEEE--EcCCCce
Q psy7482         196 E-TTVCTGNEES--AITAYNLTDGSHLWQIKASASR--------IKGLVFFSIPQETTVCTGNEESAITAY--NLTDGSH  262 (327)
Q Consensus       196 ~-~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~--------v~~~~~~~s~~~~~l~~~~~d~~i~i~--d~~~~~~  262 (327)
                      | .+++++..++  .|.+||+.+++.......+...        +..++|  +++++++++++. +.++||  |+.+++ 
T Consensus       252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~--~~~~~~~~~~~~-~~~~l~~~d~~~~~-  327 (662)
T 3azo_A          252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAP--LANGLIAVVHGK-GAAVLGILDPESGE-  327 (662)
T ss_dssp             TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEE--CTTSCEEEEEBS-SSCEEEEEETTTTE-
T ss_pred             CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeE--eCCCEEEEEEEc-CccEEEEEECCCCc-
Confidence            9 5666777777  5666676566554333333222        456777  489999999998 999999  554454 


Q ss_pred             eEEeecccCceEEE-eeeC-cEEEE-EecCCc--EEEEEccCc
Q psy7482         263 LWHIKASASRIKGL-ASHR-NHLIC-ITSAGD--LVVWELNED  300 (327)
Q Consensus       263 ~~~~~~~~~~v~~~-~~~~-~~l~~-~~~dg~--v~iw~~~~~  300 (327)
                      +..+..|...+..+ ++++ .++++ ++.+..  |.+|++.++
T Consensus       328 ~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g  370 (662)
T 3azo_A          328 LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG  370 (662)
T ss_dssp             EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred             EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence            67788787788887 7776 33333 344443  444555444

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.89  E-value=2.7e-20  Score=153.08  Aligned_cols=245  Identities=9%  Similarity=0.074  Sum_probs=165.4

Q ss_pred             cEEEEEe--CCCEE-EEecCCCeEEEEEccccccccccccc------cccEEEEEECCCCCeEEEecCC-----------
Q psy7482          16 SVRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQH------EGTITCLKFTPEGSHLISCSDD-----------   75 (327)
Q Consensus        16 ~v~~~~~--~~~~l-~~~~~dg~v~~w~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d-----------   75 (327)
                      .+..+++  +++++ +++..++.|.+||+.+++....+..+      ...+..++|+|+|++|++++.+           
T Consensus        44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~  123 (349)
T 1jmx_B           44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK  123 (349)
T ss_dssp             SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred             CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence            4667777  77755 56667899999999998877666532      2337889999999999988865           


Q ss_pred             -CcEEEEEcCCCeEEEeEE-ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc---------
Q psy7482          76 -GSIAIFRVGSWQLEKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG---------  144 (327)
Q Consensus        76 -~~i~iw~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---------  144 (327)
                       +.|.+||+.+++....+. ..+... +.+++|+|+++ +++++  +.|.+||+.+++....+........         
T Consensus       124 ~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (349)
T 1jmx_B          124 PPRLEVFSTADGLEAKPVRTFPMPRQ-VYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY  199 (349)
T ss_dssp             CCEEEEEEGGGGGGBCCSEEEECCSS-CCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred             CCeEEEEECCCccccceeeeccCCCc-ccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcccee
Confidence             899999998854332221 122334 88999999999 66554  4499999998887665544321000         


Q ss_pred             ----------ccceEEEEEccCCcEEEeec--CCeEEEEEecCCceee-Ee-cCCCceeEEEeec-C-ceEEEeCCCCcE
Q psy7482         145 ----------FENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQ-TL-KSESKVHSVCFLN-E-TTVCTGNEESAI  208 (327)
Q Consensus       145 ----------~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~-~~-~~~~~i~~~~~~~-~-~~l~~~~~d~~i  208 (327)
                                ......+++++++.......  ...+..+|..+++... .+ .....+..++++| + ++++++  ++.|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v  277 (349)
T 1jmx_B          200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRL  277 (349)
T ss_dssp             CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEE
T ss_pred             eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeE
Confidence                      00244566766542211111  1122224444433211 11 1456788999999 8 666666  8899


Q ss_pred             EEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482         209 TAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       209 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                      .+||+.+++.+..+... ..+.+++|  +|++++|++++.++.|.+||+.+++.+..+..+
T Consensus       278 ~~~d~~~~~~~~~~~~~-~~~~~~~~--s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~  335 (349)
T 1jmx_B          278 AKYDLKQRKLIKAANLD-HTYYCVAF--DKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP  335 (349)
T ss_dssp             EEEETTTTEEEEEEECS-SCCCEEEE--CSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred             EEEECccCeEEEEEcCC-CCccceEE--CCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence            99999999887777643 34678899  489999888888999999999999988887655

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.88  E-value=2.2e-20  Score=154.67  Aligned_cols=241  Identities=12%  Similarity=0.121  Sum_probs=165.2

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEcc-ccccccccccc-cccEEEEEECCCCCe--EEEec-------------CC
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMV-KRKQSGALMQH-EGTITCLKFTPEGSH--LISCS-------------DD   75 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~-------------~d   75 (327)
                      ..+..+++  ++++|++++.+ .|.+|++. +++........ .+.+.+++|+|+|++  ++++.             .+
T Consensus        40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~  118 (365)
T 1jof_A           40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA  118 (365)
T ss_dssp             CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred             CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence            45677888  89999988877 99999997 67654332211 123556899999994  55654             68


Q ss_pred             CcEEEEEcC-CCeEEEeEEe---cccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcC-CCceeeeeeccccCccccceE
Q psy7482          76 GSIAIFRVG-SWQLEKLFKK---AHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLV-KGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        76 ~~i~iw~~~-~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      +.+.+|++. +++....+..   .+... +.+++|+|+|++++++.. ++.|.+||+. +++.......... .+...+.
T Consensus       119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~-~~g~~p~  196 (365)
T 1jof_A          119 GYGNVFSVSETGKLEKNVQNYEYQENTG-IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP-DPGDHPR  196 (365)
T ss_dssp             CEEEEEEECTTCCEEEEEEEEECCTTCC-EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS-STTCCEE
T ss_pred             ceEEEEccCCCCcCcceEeeEEeCCCCc-ceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC-CCCCCCC
Confidence            999999997 4665544421   13334 899999999998887764 6799999998 6765332222100 0112388


Q ss_pred             EEEEccCCcEEEeec--CCeEEEEEec--CCcee---eEec---CC----C-------ceeEEE-eecC-ceEEEeCCC-
Q psy7482         150 SVVWSPEGLLYAIPI--QNKAVVFSVE--KAGVL---QTLK---SE----S-------KVHSVC-FLNE-TTVCTGNEE-  205 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~--~~~i~i~d~~--~~~~~---~~~~---~~----~-------~i~~~~-~~~~-~~l~~~~~d-  205 (327)
                      .++|+|+|++++++.  ++.+.+|++.  +++..   ..+.   ..    .       .+..++ |+|| ++|+++..+ 
T Consensus       197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~  276 (365)
T 1jof_A          197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN  276 (365)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred             EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence            999999999887765  6899999875  45432   1222   11    1       488999 9999 566665432 


Q ss_pred             C-----cEEEEEcC-CCceeE---EeeecccceEEEEEEecC---CCcEEEEecCC-CeEEEEEcCCC
Q psy7482         206 S-----AITAYNLT-DGSHLW---QIKASASRIKGLVFFSIP---QETTVCTGNEE-SAITAYNLTDG  260 (327)
Q Consensus       206 ~-----~i~i~d~~-~~~~~~---~~~~~~~~v~~~~~~~s~---~~~~l~~~~~d-~~i~i~d~~~~  260 (327)
                      +     .|.+|++. +++...   ....+......++|+  |   +|++|++++.+ +.|.+|++...
T Consensus       277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~s--p~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVS--PCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEE--ECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceec--CCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            2     89999996 555433   133344456778885  7   89999988864 89999998765

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.88  E-value=5.9e-19  Score=141.15  Aligned_cols=238  Identities=11%  Similarity=0.135  Sum_probs=174.1

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc------cccccEEEEEE-CCCCCeEEEecC-CCcEEEE
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM------QHEGTITCLKF-TPEGSHLISCSD-DGSIAIF   81 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~------~~~~~v~~~~~-~~~~~~l~~~~~-d~~i~iw   81 (327)
                      +|-..+.++++  +++++++...++.|.+||.. ++....+.      ++...+..+++ .++++++++... ++.|.+|
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~  105 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY  105 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence            45677899999  78888888889999999976 55554443      24457899999 567776666543 7899999


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      | .+++....+...+... +..++++++++++++...++.|.+||.. ++....+....   +...+..++++|++++++
T Consensus       106 d-~~g~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~---~~~~p~~i~~~~~g~l~v  179 (286)
T 1q7f_A          106 N-QYGQFVRKFGATILQH-PRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSK---HLEFPNGVVVNDKQEIFI  179 (286)
T ss_dssp             C-TTSCEEEEECTTTCSC-EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTT---TCSSEEEEEECSSSEEEE
T ss_pred             C-CCCcEEEEecCccCCC-ceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCC---ccCCcEEEEECCCCCEEE
Confidence            9 5677766663333344 8999999999887777778899999964 55444433221   123488999999999877


Q ss_pred             eec-CCeEEEEEecCCceeeEecCC---CceeEEEeecC-ceEEEeCCCC-cEEEEEcCCCceeEEeeeccc--ceEEEE
Q psy7482         162 IPI-QNKAVVFSVEKAGVLQTLKSE---SKVHSVCFLNE-TTVCTGNEES-AITAYNLTDGSHLWQIKASAS--RIKGLV  233 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~~~~~~~~~---~~i~~~~~~~~-~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~--~v~~~~  233 (327)
                      +.. ++.|++||. +++.+..+...   ..+..++++++ .++++...++ .|.+||. +++.+..+..+..  .+.+++
T Consensus       180 ~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~  257 (286)
T 1q7f_A          180 SDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVA  257 (286)
T ss_dssp             EEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEE
T ss_pred             EECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEE
Confidence            766 899999997 45566666532   57899999998 5555555665 9999995 5667777765543  367888


Q ss_pred             EEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         234 FFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      +.  |+|+++++ +.|+.|++|++....
T Consensus       258 ~~--~~g~l~vs-~~~~~v~v~~~~~~~  282 (286)
T 1q7f_A          258 LM--DDGSVVLA-SKDYRLYIYRYVQLA  282 (286)
T ss_dssp             EE--TTTEEEEE-ETTTEEEEEECSCCC
T ss_pred             EC--CCCcEEEE-CCCCeEEEEEccccc
Confidence            85  89987777 568999999986543

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.87  E-value=2.9e-19  Score=141.53  Aligned_cols=240  Identities=11%  Similarity=0.119  Sum_probs=185.0

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccccc-ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCce
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV  101 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v  101 (327)
                      .+++|++++.++.|.+||.++++.+..+..+. ..+.++.++|+|++|+  +.++.|..||. +++.+..+ .......+
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~-~~~~~~~~   79 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNI-AAPAGCEM   79 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEE-ECCTTCEE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEE-cCCCCccc
Confidence            36789999999999999999999999988765 4788999999999888  34678999999 79998888 44332338


Q ss_pred             eeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeecccc-CccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce
Q psy7482         102 NHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSY-GVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV  178 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~  178 (327)
                      .++.+.++|+.+++.+. ++.+..+|. +++.+..+..... .........++..++|+++++.. ++.|..||.+ ++.
T Consensus        80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~  157 (276)
T 3no2_A           80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL  157 (276)
T ss_dssp             EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence            89999999999998887 778888885 6777766655332 11223355677899999998886 8999999998 999


Q ss_pred             eeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeeccc------ceEEEEEEecCCCcEEEEecCC--
Q psy7482         179 LQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASAS------RIKGLVFFSIPQETTVCTGNEE--  249 (327)
Q Consensus       179 ~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~s~~~~~l~~~~~d--  249 (327)
                      +..+.....+.++...++ +.++++..++.|..+|..+++.+.++..+..      .+..++..  ++|..+++....  
T Consensus       158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~--~~G~i~v~~~~g~~  235 (276)
T 3no2_A          158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL--QNGGLYICNWQGHD  235 (276)
T ss_dssp             EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC--TTSCEEEEEECTTC
T ss_pred             EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEc--CCCCEEEEeccCcc
Confidence            999986666777888887 6777777788999999999999999864431      25666663  888888876321  


Q ss_pred             ------CeEEEEEc-CCCceeEEeeccc
Q psy7482         250 ------SAITAYNL-TDGSHLWHIKASA  270 (327)
Q Consensus       250 ------~~i~i~d~-~~~~~~~~~~~~~  270 (327)
                            +..+++++ .+++.++++....
T Consensus       236 ~~~~~~~~~~~~~~~~~g~~~W~~~~~~  263 (276)
T 3no2_A          236 REAGKGKHPQLVEIDSEGKVVWQLNDKV  263 (276)
T ss_dssp             TTGGGSCCCSEEEECTTSBEEEEECCTT
T ss_pred             ccccccCCceEEEECCCCCEEEEecCcc
Confidence                  23456665 5778888877554

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.87  E-value=5.5e-19  Score=144.14  Aligned_cols=242  Identities=13%  Similarity=0.139  Sum_probs=182.1

Q ss_pred             cccEEEEEECCCCCeEEEecCC------------------------CcEEEEEcCCCeEEEeEEecccCCceeeEEEecC
Q psy7482          54 EGTITCLKFTPEGSHLISCSDD------------------------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS  109 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d------------------------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~  109 (327)
                      -+.+.+++++|+|+++++...+                        +.|.+||..+++....+...+... +..++++++
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-p~gia~d~~  101 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYL-PHGLSIDTD  101 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSS-EEEEEECTT
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCC-ceEEEECCC
Confidence            4569999999999988887777                        479999999888877663334445 899999999


Q ss_pred             CCEEEEEeCCCCEEEEEcCCCc-eeeeeecccc----CccccceEEEEEcc-CCcEEEeec--CCeEEEEEecCCceeeE
Q psy7482         110 GKLALSVGKDKTLRTWNLVKGR-SAYITNLSSY----GVGFENLDSVVWSP-EGLLYAIPI--QNKAVVFSVEKAGVLQT  181 (327)
Q Consensus       110 ~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~----~~~~~~v~~~~~~~-~~~~l~~~~--~~~i~i~d~~~~~~~~~  181 (327)
                      ++++++...++.|+.||..... .+..+.....    ..+...+..++++| ++.++++.+  ++.|++|| .+++.+..
T Consensus       102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~  180 (329)
T 3fvz_A          102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ  180 (329)
T ss_dssp             SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred             CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence            9988888888999999975432 2322211100    11233488999999 788888873  78999999 56777777


Q ss_pred             ecC-C----------CceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEEecCCCcEEEE-
Q psy7482         182 LKS-E----------SKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFFSIPQETTVCT-  245 (327)
Q Consensus       182 ~~~-~----------~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~~-  245 (327)
                      +.. .          ..+..++++|+ +. +++...++.|++||..+++.+..+.  .+...+..+++.  | +..+.+ 
T Consensus       181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--p-g~~~~~~  257 (329)
T 3fvz_A          181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYI--P-GFLFAVN  257 (329)
T ss_dssp             ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEE--T-TEEEEEE
T ss_pred             eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeec--C-CEEEEeC
Confidence            651 1          23889999997 54 5566788899999998888888774  345567888885  6 433333 


Q ss_pred             ------ecCCCeEEEEEcCCCceeEEee---cccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         246 ------GNEESAITAYNLTDGSHLWHIK---ASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       246 ------~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                            ...+..|++||..+++.+..+.   ++...+.+++++|  .++++...++.|++|++...
T Consensus       258 g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~  323 (329)
T 3fvz_A          258 GKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK  323 (329)
T ss_dssp             CCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred             CCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence                  3345589999999999888874   5667789999999  67788888999999998765

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.87  E-value=4.8e-19  Score=145.64  Aligned_cols=256  Identities=12%  Similarity=0.129  Sum_probs=175.4

Q ss_pred             ccEEEEEeCCCEEEEec---------CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---C--cEEE
Q psy7482          15 ASVRSVAATSKLAASSG---------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---G--SIAI   80 (327)
Q Consensus        15 ~~v~~~~~~~~~l~~~~---------~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~--~i~i   80 (327)
                      ..+...+++|+.++...         .++.|.+||+.+++... +    ..+..++|+|||+.|+.++.+   +  .|.+
T Consensus        15 ~~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~   89 (347)
T 2gop_A           15 AYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWV   89 (347)
T ss_dssp             CEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEE
T ss_pred             EEcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEE
Confidence            44555666888887542         25679999998876433 3    568889999999999887654   2  4888


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---------------------------CCEEEEEcCCCcee
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---------------------------KTLRTWNLVKGRSA  133 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~iwd~~~~~~~  133 (327)
                      |++.+++..... ...  . +..+.|+|+++.|+.++.+                           ..|.+||+.+++..
T Consensus        90 ~~~~~g~~~~l~-~~~--~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~  165 (347)
T 2gop_A           90 ADLETLSSKKIL-EAK--N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI  165 (347)
T ss_dssp             EETTTTEEEEEE-EES--E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred             EECCCCceEEEE-cCC--C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence            898888766554 222  2 8899999999988887642                           56999999888762


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeec-C------C-eEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCC
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q------N-KAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNE  204 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~------~-~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~  204 (327)
                      ..+... .      +..+.|+|++ +++++. +      . ...+|.+.+++......+ ..+..+  +|+ ..++.++.
T Consensus       166 ~~l~~~-~------~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~  234 (347)
T 2gop_A          166 EEFEKP-R------FSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGK  234 (347)
T ss_dssp             EEEEEE-T------TCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEEC
T ss_pred             eeecCC-C------cccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEc
Confidence            333222 2      7889999999 766664 2      2 334444445544333334 444444  888 55665543


Q ss_pred             C--------CcEEEEEcCCCceeEEeeecccceEE-EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEE
Q psy7482         205 E--------SAITAYNLTDGSHLWQIKASASRIKG-LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKG  275 (327)
Q Consensus       205 d--------~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~  275 (327)
                      +        ..|.+||  +++.......+...+.. +.|  + ++ ++++++.++.+++| +.+++. ..+..+...|.+
T Consensus       235 ~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~--s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~  306 (347)
T 2gop_A          235 PEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIK--D-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMG  306 (347)
T ss_dssp             CSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEE--T-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEE
T ss_pred             cccCCccccceEEEEC--CCceEeccccCCcccCCccEE--c-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEe
Confidence            3        4688888  55544444556667776 777  4 77 88899999999999 876655 344445778999


Q ss_pred             EeeeCcEEEEEecCCcE-EEEEcc
Q psy7482         276 LASHRNHLICITSAGDL-VVWELN  298 (327)
Q Consensus       276 ~~~~~~~l~~~~~dg~v-~iw~~~  298 (327)
                      ++|+|.++++++.++.. .+|.++
T Consensus       307 ~~~s~~~~~~~~~~~~~~~l~~~~  330 (347)
T 2gop_A          307 FDVDEIVVYLKETATRLRELFTWD  330 (347)
T ss_dssp             EEESSSEEEEEECSSSCCEEEEES
T ss_pred             eeeeCcEEEEEcCCCChHHheEeC
Confidence            99998666677777765 888876

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.87  E-value=4.9e-19  Score=144.41  Aligned_cols=242  Identities=13%  Similarity=0.121  Sum_probs=181.2

Q ss_pred             CccEEEEEe--CCCEEEEecCC------------------------CeEEEEEccccccccccc-cccccEEEEEECCCC
Q psy7482          14 TASVRSVAA--TSKLAASSGAD------------------------ETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEG   66 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~d------------------------g~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~   66 (327)
                      -+.+.++++  +|+++++...+                        +.|.+||..+++....+. ++-.....++++|+|
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g  102 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG  102 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence            467899999  78888888777                        479999998888765554 344578999999999


Q ss_pred             CeEEEecCCCcEEEEEcCCCe-EEEeEE--------ecccCCceeeEEEec-CCCEEEEEe-CCCCEEEEEcCCCceeee
Q psy7482          67 SHLISCSDDGSIAIFRVGSWQ-LEKLFK--------KAHKGTAVNHISIHP-SGKLALSVG-KDKTLRTWNLVKGRSAYI  135 (327)
Q Consensus        67 ~~l~~~~~d~~i~iw~~~~~~-~~~~~~--------~~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~  135 (327)
                      +++++...++.|++|+..... .+..+.        ..+... ...++++| ++.++++.+ .++.|++|| .+++....
T Consensus       103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~-P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~  180 (329)
T 3fvz_A          103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQ-PTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQ  180 (329)
T ss_dssp             CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSS-EEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEE
T ss_pred             CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCC-CcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEE
Confidence            988888889999999986442 344441        122234 88999999 788777776 689999999 45666554


Q ss_pred             eecccc-----CccccceEEEEEccC-CcEEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecCc-------e
Q psy7482         136 TNLSSY-----GVGFENLDSVVWSPE-GLLYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNET-------T  198 (327)
Q Consensus       136 ~~~~~~-----~~~~~~v~~~~~~~~-~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~-------~  198 (327)
                      +.....     ......+..++++|+ +.++++.. ++.|++||..+++.+..+.   ....+..++++|.-       .
T Consensus       181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~  260 (329)
T 3fvz_A          181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKP  260 (329)
T ss_dssp             ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCC
T ss_pred             eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCE
Confidence            432221     112234889999998 66666665 8899999999898888885   45678899999931       1


Q ss_pred             EEEeCCCCcEEEEEcCCCceeEEee---ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         199 VCTGNEESAITAYNLTDGSHLWQIK---ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      +++...+..|++||..+++.+..+.   .+......+++  +|+|.++++...++.|++|++..
T Consensus       261 ~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~--~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          261 YFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVA--SEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             CTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEE--CTTSEEEEEESSSCCEEEEEEEE
T ss_pred             EeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEE--CCCCCEEEEECCCCEEEEEeCCc
Confidence            2223345689999999999888873   56667889999  48998888888999999999754

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.86  E-value=6.8e-19  Score=143.92  Aligned_cols=264  Identities=14%  Similarity=0.124  Sum_probs=186.2

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      ..|.+++|  ++..++..+.++.++.|   .++....+..+...+.+++|+|++++++++..++.|.+||..+++.....
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~   82 (333)
T 2dg1_A            6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF   82 (333)
T ss_dssp             CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred             cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence            44667777  55566666778889999   34555566666677899999999998888888999999999887765544


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCC----CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC---
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ---  165 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---  165 (327)
                       ..+... +.+++++++++++++...+    +.|.+||.++++.........   ....+..++++|+++++++...   
T Consensus        83 -~~~~~~-~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~~~~  157 (333)
T 2dg1_A           83 -VSHKAN-PAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS---TAYCIDDMVFDSKGGFYFTDFRGYS  157 (333)
T ss_dssp             -ECSSSS-EEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS---SCCCEEEEEECTTSCEEEEECCCBT
T ss_pred             -eCCCCC-cceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc---cCCcccceEECCCCCEEEEeccccc
Confidence             344455 9999999999887777665    689999988776542322111   1234889999999988877652   


Q ss_pred             ----CeEEEEEecCCceeeEecCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCC-CceeEEe--------eecccceE
Q psy7482         166 ----NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTD-GSHLWQI--------KASASRIK  230 (327)
Q Consensus       166 ----~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~-~~~~~~~--------~~~~~~v~  230 (327)
                          +.|..+|..+++..........+..++|+|+ +.+ ++...++.|.+||+.+ +..+..+        .++ ..+.
T Consensus       158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~  236 (333)
T 2dg1_A          158 TNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPD  236 (333)
T ss_dssp             TBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEE
T ss_pred             cCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCC
Confidence                5677777655554433334455789999999 444 4556688999999964 3333211        111 3567


Q ss_pred             EEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC------ceEEEeeeC--cEEEEEecCC
Q psy7482         231 GLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS------RIKGLASHR--NHLICITSAG  290 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~--~~l~~~~~dg  290 (327)
                      .+++  +++|+++++...++.|.+||. +++.+..+..+..      .+.+++|++  ..|+.++.++
T Consensus       237 ~i~~--d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g  301 (333)
T 2dg1_A          237 SCCI--DSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI  301 (333)
T ss_dssp             EEEE--BTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred             ceEE--CCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence            7888  488988888777899999998 5666666665433      688999988  4666665553

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.86  E-value=4.8e-18  Score=135.82  Aligned_cols=237  Identities=12%  Similarity=0.189  Sum_probs=172.4

Q ss_pred             cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe-----cccCCceeeEEEe-cCCCEEEEEeC-CCCEEE
Q psy7482          52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK-----AHKGTAVNHISIH-PSGKLALSVGK-DKTLRT  124 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~~~~~~v~~~~~~-~~~~~l~~~~~-dg~i~i  124 (327)
                      ++-..+.+++++++++++++...++.|.+||.. ++....+..     .+... +..+++. ++++++++... ++.|.+
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~-p~~i~~~~~~g~l~v~~~~~~~~i~~  104 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLY-PNRVAVVRNSGDIIVTERSPTHQIQI  104 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSS-EEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccC-ceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence            455678999999999988888889999999987 555555521     12234 8899995 56665555533 789999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecCc-eE
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNET-TV  199 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~-~l  199 (327)
                      || .+++....+....    ...+..++++|+++++++.. ++.|.+||. .++.+..+.   ....+..+++++++ ++
T Consensus       105 ~d-~~g~~~~~~~~~~----~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~  178 (286)
T 1q7f_A          105 YN-QYGQFVRKFGATI----LQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIF  178 (286)
T ss_dssp             EC-TTSCEEEEECTTT----CSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEE
T ss_pred             EC-CCCcEEEEecCcc----CCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEE
Confidence            99 5566554442221    23488999999999887765 789999995 456666664   33568999999984 55


Q ss_pred             EEeCCCCcEEEEEcCCCceeEEeeec--ccceEEEEEEecCCCcEEEEecCCC-eEEEEEcCCCceeEEeecccC--ceE
Q psy7482         200 CTGNEESAITAYNLTDGSHLWQIKAS--ASRIKGLVFFSIPQETTVCTGNEES-AITAYNLTDGSHLWHIKASAS--RIK  274 (327)
Q Consensus       200 ~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~--~v~  274 (327)
                      ++...++.|++||. +++.+..+..+  ...+..+++  +++|+++++...++ .|.+||. +++.+..+..+..  .+.
T Consensus       179 v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~--d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~  254 (286)
T 1q7f_A          179 ISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGI--NSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCF  254 (286)
T ss_dssp             EEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEE--CTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEE
T ss_pred             EEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEE--CCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcce
Confidence            55567899999997 45566666433  356788998  48999888888776 9999995 5667777765543  477


Q ss_pred             EEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         275 GLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       275 ~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +++++| ..++.++.|+.|++|++...
T Consensus       255 ~i~~~~~g~l~vs~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          255 DVALMDDGSVVLASKDYRLYIYRYVQL  281 (286)
T ss_dssp             EEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred             eEEECCCCcEEEECCCCeEEEEEcccc
Confidence            999999 33444467999999998665

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.86  E-value=1.3e-18  Score=141.76  Aligned_cols=258  Identities=10%  Similarity=0.036  Sum_probs=185.8

Q ss_pred             CCCeEEEEEccccccccccc------cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEE
Q psy7482          32 ADETVVLYDMVKRKQSGALM------QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHIS  105 (327)
Q Consensus        32 ~dg~v~~w~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~  105 (327)
                      .++.|.++|..+++....+.      ........+.+. +++..++...++.|.+||..+++.+..+ .. ... ...++
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i-~~-~~~-p~~i~   90 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRI-TG-FTS-PRYIH   90 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEE-EC-CSS-EEEEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEc-CC-CCC-CcEEE
Confidence            48899999999988765442      122346777775 3555566666889999999999998888 32 234 88999


Q ss_pred             EecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEec
Q psy7482         106 IHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       106 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~  183 (327)
                      ++++++..++...++.|.+||..+++....+..............+++ .+++++++..  ++.|.++|..+++....+.
T Consensus        91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~  169 (328)
T 3dsm_A           91 FLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELT  169 (328)
T ss_dssp             EEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred             EeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence            999885444443789999999999887766655441111112556777 4566666552  7899999999999888888


Q ss_pred             CCCceeEEEeecCceEEEeC-CC----------CcEEEEEcCCCceeEEeeec-ccceEEEEEEecCCCcEEEEecCCCe
Q psy7482         184 SESKVHSVCFLNETTVCTGN-EE----------SAITAYNLTDGSHLWQIKAS-ASRIKGLVFFSIPQETTVCTGNEESA  251 (327)
Q Consensus       184 ~~~~i~~~~~~~~~~l~~~~-~d----------~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~s~~~~~l~~~~~d~~  251 (327)
                      .......+.++|++.++.++ .+          +.|.++|..+++....+... ......+++  +|+++.|.++..  .
T Consensus       170 ~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~--~~d~~~lyv~~~--~  245 (328)
T 3dsm_A          170 IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQL--NGTRDTLYWINN--D  245 (328)
T ss_dssp             CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEE--CTTSCEEEEESS--S
T ss_pred             cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEE--ecCCCEEEEEcc--E
Confidence            66667889999985555444 33          78999999988877666543 235788999  488998888765  8


Q ss_pred             EEEEEcCCCceeE--EeecccCceEEEeeeC---cEEEEE----ecCCcEEEEEcc
Q psy7482         252 ITAYNLTDGSHLW--HIKASASRIKGLASHR---NHLICI----TSAGDLVVWELN  298 (327)
Q Consensus       252 i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~---~~l~~~----~~dg~v~iw~~~  298 (327)
                      |.+||..+++...  .+.........++++|   .++++.    ..++.|.+||..
T Consensus       246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~  301 (328)
T 3dsm_A          246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ  301 (328)
T ss_dssp             EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred             EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence            9999998877532  1222245688999998   555555    568899999998

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.86  E-value=1.7e-19  Score=162.76  Aligned_cols=234  Identities=15%  Similarity=0.154  Sum_probs=165.4

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC--c--eeeEEEecCCCEEEEEeCC---------CCE
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT--A--VNHISIHPSGKLALSVGKD---------KTL  122 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~--~--v~~~~~~~~~~~l~~~~~d---------g~i  122 (327)
                      ....++|+|++++++++  |+.|++||+.+++....+ ..+...  .  ...+.|+|||++|+.++.+         +.+
T Consensus        18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~   94 (740)
T 4a5s_A           18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFL-ENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY   94 (740)
T ss_dssp             CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEE-CTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred             cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEE-echhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence            35688999999988886  899999999999887666 555432  1  2347899999999998875         567


Q ss_pred             EEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec--CCCce------------
Q psy7482         123 RTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK--SESKV------------  188 (327)
Q Consensus       123 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~--~~~~i------------  188 (327)
                      .+||+.+++.......      ...+...+|||||+.|+.+.++.|++||+.+++..+...  +...+            
T Consensus        95 ~~~d~~~~~~~~l~~~------~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee  168 (740)
T 4a5s_A           95 DIYDLNKRQLITEERI------PNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE  168 (740)
T ss_dssp             EEEETTTTEECCSSCC------CTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred             EEEECCCCcEEEcccC------CCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence            7999999876442221      234899999999999999999999999998877543222  11112            


Q ss_pred             -----eEEEeecC-ceEEEeCCC------------------------------------CcEEEEEcCC---Cc--eeEE
Q psy7482         189 -----HSVCFLNE-TTVCTGNEE------------------------------------SAITAYNLTD---GS--HLWQ  221 (327)
Q Consensus       189 -----~~~~~~~~-~~l~~~~~d------------------------------------~~i~i~d~~~---~~--~~~~  221 (327)
                           ..+.|+|| ..|+.++.|                                    ..|++||+.+   ++  ....
T Consensus       169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~  248 (740)
T 4a5s_A          169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ  248 (740)
T ss_dssp             TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred             hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence                 35899999 667765321                                    1588899988   63  2233


Q ss_pred             ee------ecccceEEEEEEecCCCcEEEEe----cCCCeEEEEEcCCCc----ee--EEe--ecccCceE-----EEee
Q psy7482         222 IK------ASASRIKGLVFFSIPQETTVCTG----NEESAITAYNLTDGS----HL--WHI--KASASRIK-----GLAS  278 (327)
Q Consensus       222 ~~------~~~~~v~~~~~~~s~~~~~l~~~----~~d~~i~i~d~~~~~----~~--~~~--~~~~~~v~-----~~~~  278 (327)
                      +.      +|...+..++|+  |||+.++..    +.+..|.+||+.+++    +.  ..+  ..|...+.     ...|
T Consensus       249 l~~~~~~~~~~~~~~~~~ws--pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f  326 (740)
T 4a5s_A          249 ITAPASMLIGDHYLCDVTWA--TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF  326 (740)
T ss_dssp             ECCCHHHHTSCEEEEEEEEE--ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE
T ss_pred             ecCCccCCCCCeEEEEEEEe--CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE
Confidence            33      277789999995  899966654    234579999999887    22  222  44555544     7889


Q ss_pred             eC--cEEE-EEe-cCC--cEEEEEccCc
Q psy7482         279 HR--NHLI-CIT-SAG--DLVVWELNED  300 (327)
Q Consensus       279 ~~--~~l~-~~~-~dg--~v~iw~~~~~  300 (327)
                      +|  +.|+ ..+ .+|  .|++|++..+
T Consensus       327 spDG~~l~~~~s~~~G~~~l~~~~~~~~  354 (740)
T 4a5s_A          327 TLDGNSFYKIISNEEGYRHICYFQIDKK  354 (740)
T ss_dssp             CTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred             cCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence            99  5555 554 444  4777887765

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.86  E-value=3.8e-20  Score=154.87  Aligned_cols=269  Identities=6%  Similarity=0.003  Sum_probs=175.5

Q ss_pred             EEEEEe--CCCEEEEecC---CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          17 VRSVAA--TSKLAASSGA---DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~~---dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      +..++|  +|++|+....   +..|.+||+.+++.......+......+.|+|||+.|+.++.++.|++||+.+++....
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~  117 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI  117 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence            555666  8998876643   24788899988776544433333233478999999999999998999999998876555


Q ss_pred             EEecccCCceee-------------------EEEecCCCEEEEE-----eCCCCEEEEEcCCCceeeeeeccccCccccc
Q psy7482          92 FKKAHKGTAVNH-------------------ISIHPSGKLALSV-----GKDKTLRTWNLVKGRSAYITNLSSYGVGFEN  147 (327)
Q Consensus        92 ~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  147 (327)
                      . ..+... ...                   ..|+|+++.++..     ..+..|.+||+.+++........      ..
T Consensus       118 ~-~~~~~~-~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~------~~  189 (396)
T 3c5m_A          118 Y-TVDEEW-KGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT------AW  189 (396)
T ss_dssp             E-ECCTTE-EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEES------SC
T ss_pred             E-eccccc-CCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCC------cc
Confidence            4 323221 111                   3456777766544     35568999999888765544322      23


Q ss_pred             eEEEEEcc-CCcEEEeec-C------CeEEEEEecCCceeeEecC--CCceeEEEeecC-ceEEEeCCC-----CcEEEE
Q psy7482         148 LDSVVWSP-EGLLYAIPI-Q------NKAVVFSVEKAGVLQTLKS--ESKVHSVCFLNE-TTVCTGNEE-----SAITAY  211 (327)
Q Consensus       148 v~~~~~~~-~~~~l~~~~-~------~~i~i~d~~~~~~~~~~~~--~~~i~~~~~~~~-~~l~~~~~d-----~~i~i~  211 (327)
                      +..+.|+| +++.++... +      ..|.+||+..++......+  ...+..+.|+|+ ..|+.++.+     +.|++|
T Consensus       190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~  269 (396)
T 3c5m_A          190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA  269 (396)
T ss_dssp             EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred             cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence            88999999 787666543 2      4688888876553333332  235788999999 556655432     449999


Q ss_pred             EcCCCceeEEeeecccceEEEEEEecC-CCcEEEEec----------------CCCeEEEEEcCCCceeEEeecccC---
Q psy7482         212 NLTDGSHLWQIKASASRIKGLVFFSIP-QETTVCTGN----------------EESAITAYNLTDGSHLWHIKASAS---  271 (327)
Q Consensus       212 d~~~~~~~~~~~~~~~~v~~~~~~~s~-~~~~l~~~~----------------~d~~i~i~d~~~~~~~~~~~~~~~---  271 (327)
                      |+.+++...... ... .. +.|+  | +|++++.++                .+..|++||+.+++.. .+..+..   
T Consensus       270 d~~~g~~~~l~~-~~~-~~-~~~s--~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~  343 (396)
T 3c5m_A          270 NPETLENEEVMV-MPP-CS-HLMS--NFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWD  343 (396)
T ss_dssp             CTTTCCEEEEEE-CCS-EE-EEEE--CSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCC
T ss_pred             ECCCCCeEEeee-CCC-CC-CCcc--CCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccc
Confidence            998876543222 112 22 6775  7 999888754                3478999999887643 3444443   


Q ss_pred             --------ceEEEeeeC--cEEEEEe-cCCcEEEEEccC
Q psy7482         272 --------RIKGLASHR--NHLICIT-SAGDLVVWELNE  299 (327)
Q Consensus       272 --------~v~~~~~~~--~~l~~~~-~dg~v~iw~~~~  299 (327)
                              .+..++|+|  +.|+.++ .++...+|.++.
T Consensus       344 ~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~  382 (396)
T 3c5m_A          344 VLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV  382 (396)
T ss_dssp             CBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred             cccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence                    256678998  5665555 466666666553

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.85  E-value=1.1e-18  Score=144.00  Aligned_cols=257  Identities=12%  Similarity=0.045  Sum_probs=179.7

Q ss_pred             cCCccEEEEEe--CCCEEEEec----------CCCeEEEEEccccccccccccc------cccEEEEEECCCCCeEEEec
Q psy7482          12 SHTASVRSVAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQH------EGTITCLKFTPEGSHLISCS   73 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~   73 (327)
                      .+..+  .+++  ++++++++.          .++.|.+||..+++.+..+...      ......++++|+|++|+++.
T Consensus        49 ~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n  126 (361)
T 2oiz_A           49 TAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQN  126 (361)
T ss_dssp             CCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEE
T ss_pred             CCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEEC
Confidence            34444  6777  899998876          3678999999988887776532      23466799999999999886


Q ss_pred             C--CCcEEEEEcCCCeEEEe-EEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCC-Cceeeeeec-cccCccccc
Q psy7482          74 D--DGSIAIFRVGSWQLEKL-FKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVK-GRSAYITNL-SSYGVGFEN  147 (327)
Q Consensus        74 ~--d~~i~iw~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~~~-~~~~~~~~~  147 (327)
                      .  ++.|.+||+.+++.+.. + ..  .. ...+.+.|++ ..+++.+.||.+.+|+... ++....... ........ 
T Consensus       127 ~~~~~~v~v~d~~~~~~~~~~i-~~--~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~-  201 (361)
T 2oiz_A          127 ASPATSIGIVDVAKGDYVEDVT-AA--AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDD-  201 (361)
T ss_dssp             ESSSEEEEEEETTTTEEEEEEG-GG--TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTS-
T ss_pred             CCCCCeEEEEECCCCcEEEEEe-cC--CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCC-
Confidence            4  57899999999988776 4 21  22 3335667765 6778888999999999865 443311110 00000011 


Q ss_pred             eEEEEEccCCcEEEeec-CCeEEEEEecCCce--eeEecC-----------CCceeEEEeecC-ceEEEeCC--------
Q psy7482         148 LDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV--LQTLKS-----------ESKVHSVCFLNE-TTVCTGNE--------  204 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~--~~~~~~-----------~~~i~~~~~~~~-~~l~~~~~--------  204 (327)
                      ...+.++|++..++..+ ++.+.++|+.....  ...+..           ......++++|+ +.++++..        
T Consensus       202 ~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~  281 (361)
T 2oiz_A          202 PIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTH  281 (361)
T ss_dssp             CBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCT
T ss_pred             ceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccc
Confidence            12333456665555444 88999999875532  222210           111223789998 66655432        


Q ss_pred             ---CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC--ceeEEeecccCceEEEeee
Q psy7482         205 ---ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG--SHLWHIKASASRIKGLASH  279 (327)
Q Consensus       205 ---d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~  279 (327)
                         .+.|.+||+.+++.+.++..+.  ...++|+  |+|++|++++. +.|.+||..++  +.+.++..+......++++
T Consensus       282 ~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~s--pdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~  356 (361)
T 2oiz_A          282 KFPAAEIWVMDTKTKQRVARIPGRD--ALSMTID--QQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFH  356 (361)
T ss_dssp             TCCCSEEEEEETTTTEEEEEEECTT--CCEEEEE--TTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEEC
T ss_pred             cCCCceEEEEECCCCcEEEEEecCC--eeEEEEC--CCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEec
Confidence               3589999999999999998877  8999995  99999999887 99999999999  8888886666677888887


Q ss_pred             C
Q psy7482         280 R  280 (327)
Q Consensus       280 ~  280 (327)
                      |
T Consensus       357 p  357 (361)
T 2oiz_A          357 P  357 (361)
T ss_dssp             C
T ss_pred             C
Confidence            7

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.85  E-value=8.5e-17  Score=139.32  Aligned_cols=298  Identities=10%  Similarity=0.070  Sum_probs=210.8

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC--CCeEEEeEEecccCCc
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG--SWQLEKLFKKAHKGTA  100 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~~~  100 (327)
                      .+.++++...++.|.++|..+++.+..+... ..+..+.|+|||+++++++.|+.|.+||+.  +++.+..+..+.  . 
T Consensus       166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~--~-  241 (567)
T 1qks_A          166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS--E-  241 (567)
T ss_dssp             GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS--E-
T ss_pred             CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC--C-
Confidence            4456777888999999999999988887643 356789999999999999999999999995  778777773322  2 


Q ss_pred             eeeEEEe----cCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCc-----c-ccceEEEEEccCCcEEEeec--CCe
Q psy7482         101 VNHISIH----PSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGV-----G-FENLDSVVWSPEGLLYAIPI--QNK  167 (327)
Q Consensus       101 v~~~~~~----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~-----~-~~~v~~~~~~~~~~~l~~~~--~~~  167 (327)
                      ...++|+    |||+++++++. ++.+.++|..+.+.+..+.......     + ...+..+..++++..+++..  .|.
T Consensus       242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~  321 (567)
T 1qks_A          242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK  321 (567)
T ss_dssp             EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred             CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence            7899999    69998888765 5899999999988887766543210     1 11477888999877665553  799


Q ss_pred             EEEEEecCCcee--eEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCceeEEeee-cccc--eEEEEEEecCC-
Q psy7482         168 AVVFSVEKAGVL--QTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGSHLWQIKA-SASR--IKGLVFFSIPQ-  239 (327)
Q Consensus       168 i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~~~~~~~~-~~~~--v~~~~~~~s~~-  239 (327)
                      |.++|....+..  ..+........+.|+|+ .+++ +...++.|.++|+.+++.+..+.. ...+  -....|. .|+ 
T Consensus       322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~-~p~~  400 (567)
T 1qks_A          322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFV-HPTF  400 (567)
T ss_dssp             EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEE-ETTT
T ss_pred             EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeE-CCCC
Confidence            999998776433  33445566788999998 5554 455788999999999988776654 2111  1233343 277 


Q ss_pred             CcEEEEec-CCCeEEEEEcCC-------CceeEEeecccCceEEEeeeC--cEEEEEec-------CCcEEEEEccCccC
Q psy7482         240 ETTVCTGN-EESAITAYNLTD-------GSHLWHIKASASRIKGLASHR--NHLICITS-------AGDLVVWELNEDVT  302 (327)
Q Consensus       240 ~~~l~~~~-~d~~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-------dg~v~iw~~~~~~~  302 (327)
                      +...+++. .++.|.++|..+       .+.+.++......-..+..+|  +++.+...       .+.|.++|+.+...
T Consensus       401 g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~  480 (567)
T 1qks_A          401 GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTG  480 (567)
T ss_dssp             EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCC
T ss_pred             CcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccc
Confidence            44445553 468999999987       567777776543435577888  66666552       46899999987611


Q ss_pred             ---CCc-eeeee------cCCCCceEEEEeCCC
Q psy7482         303 ---REP-QRVSA------TNDGCRFTCLAIRPP  325 (327)
Q Consensus       303 ---~~~-~~~~~------~~~~~~i~~l~~~p~  325 (327)
                         ... ..+..      ...+.++..++|+|+
T Consensus       481 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (567)
T 1qks_A          481 DGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKD  513 (567)
T ss_dssp             SSSCCCEEEECHHHHHTCCSSCCEEEEEEECTT
T ss_pred             cccCCCcEEeccccccccCCCCcceEeeeECCC
Confidence               111 22221      123567888999886

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.84  E-value=2.5e-19  Score=149.97  Aligned_cols=250  Identities=12%  Similarity=0.036  Sum_probs=168.5

Q ss_pred             EEEcccccccccccccccc-----EEEEEECCCCCeEEEecCC---CcEEEEEcCCCeEEEeEEecccCCceeeEEEecC
Q psy7482          38 LYDMVKRKQSGALMQHEGT-----ITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS  109 (327)
Q Consensus        38 ~w~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~  109 (327)
                      ..|..+++.+..+..+...     +..++|+|||++|+.....   ..|.+||+.+++..... ... ......+.|+|+
T Consensus        14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~-~~~-~~~~~~~~~spd   91 (396)
T 3c5m_A           14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT-EGK-GDNTFGGFISTD   91 (396)
T ss_dssp             EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC-CSS-CBCTTTCEECTT
T ss_pred             eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee-cCC-CCccccceECCC
Confidence            4466677666666544333     6778999999998776443   47888999888765443 222 221334789999


Q ss_pred             CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEE-------------------EEEccCCcEEEee------c
Q psy7482         110 GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDS-------------------VVWSPEGLLYAIP------I  164 (327)
Q Consensus       110 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~------~  164 (327)
                      ++.|+.++.++.|.+||+.+++.......+..     ....                   ..|+|+++.++..      .
T Consensus        92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~-----~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~  166 (396)
T 3c5m_A           92 ERAFFYVKNELNLMKVDLETLEEQVIYTVDEE-----WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP  166 (396)
T ss_dssp             SSEEEEEETTTEEEEEETTTCCEEEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred             CCEEEEEEcCCcEEEEECCCCCcEEEEecccc-----cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence            99999999989999999988876555443321     0111                   3567888766553      2


Q ss_pred             CCeEEEEEecCCceeeEecCCCceeEEEeec-C-ceEEEeCCC------CcEEEEEcCCCceeEEeeec--ccceEEEEE
Q psy7482         165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLN-E-TTVCTGNEE------SAITAYNLTDGSHLWQIKAS--ASRIKGLVF  234 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~  234 (327)
                      +..|++||+.+++......+...+..+.|+| + +.++..+.+      ..|.+||+..++.. .+..+  ...+..++|
T Consensus       167 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~  245 (396)
T 3c5m_A          167 TCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFW  245 (396)
T ss_dssp             CEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEE
T ss_pred             cceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEE
Confidence            5689999999888766666777899999999 5 545554433      46889998765433 33223  235777888


Q ss_pred             EecCCCcEEEEecCC-----CeEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEe----------------cCC
Q psy7482         235 FSIPQETTVCTGNEE-----SAITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICIT----------------SAG  290 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~----------------~dg  290 (327)
                        +|+|++|+.++.+     +.|++||+.+++........  ... +.|+|   +++++++                .++
T Consensus       246 --spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~  320 (396)
T 3c5m_A          246 --IPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP  320 (396)
T ss_dssp             --CTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC--SEE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred             --CCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence              4999987776543     45999999888654332211  122 77876   6666544                246


Q ss_pred             cEEEEEccCc
Q psy7482         291 DLVVWELNED  300 (327)
Q Consensus       291 ~v~iw~~~~~  300 (327)
                      .|++||+..+
T Consensus       321 ~i~~~d~~~~  330 (396)
T 3c5m_A          321 FLYVLNTKAK  330 (396)
T ss_dssp             EEEEEETTTT
T ss_pred             cEEEEecccC
Confidence            7999999877

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.84  E-value=1e-17  Score=136.47  Aligned_cols=249  Identities=10%  Similarity=0.059  Sum_probs=181.7

Q ss_pred             ccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482          15 ASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        15 ~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      .....+++ ++++.++...++.|.+||..+++.+.++. .......++++++++..++...++.|.+||..+++....+.
T Consensus        44 ~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~  122 (328)
T 3dsm_A           44 DVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE  122 (328)
T ss_dssp             SCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred             ccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence            44677888 55566666678999999999999888775 34568899998888554554478999999999999887774


Q ss_pred             eccc----CCceeeEEEecCCCEEEEEe--CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C-
Q psy7482          94 KAHK----GTAVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-  165 (327)
Q Consensus        94 ~~~~----~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-  165 (327)
                      .+..    .. ...+++ . +..++.+.  .++.|.++|+.+++....+.....      ...+.++|+|++++++. + 
T Consensus       123 ~g~~~~~~~~-p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~------p~~i~~~~dG~l~v~~~~~~  193 (328)
T 3dsm_A          123 CPDMDMESGS-TEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQ------PTSLVMDKYNKMWTITDGGY  193 (328)
T ss_dssp             CTTCCTTTCB-CCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSC------BCCCEECTTSEEEEEBCCBC
T ss_pred             cCCccccCCC-cceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCC------ccceEEcCCCCEEEEECCCc
Confidence            3331    13 567777 3 44555554  488999999999887776655433      67889999999877775 4 


Q ss_pred             ---------CeEEEEEecCCceeeEecC--CCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEE--eeecccceEE
Q psy7482         166 ---------NKAVVFSVEKAGVLQTLKS--ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQ--IKASASRIKG  231 (327)
Q Consensus       166 ---------~~i~i~d~~~~~~~~~~~~--~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~v~~  231 (327)
                               +.|.++|..+++....+..  ...+..++++|+ +.++++..  .|.+||..+++....  +.........
T Consensus       194 ~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~g  271 (328)
T 3dsm_A          194 EGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYG  271 (328)
T ss_dssp             TTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEE
T ss_pred             cCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEE
Confidence                     6899999999988877763  347899999997 66666654  899999988775321  2222356788


Q ss_pred             EEEEecC-CCcEEEEe----cCCCeEEEEEcCCCceeEEeecccCceEEEeee
Q psy7482         232 LVFFSIP-QETTVCTG----NEESAITAYNLTDGSHLWHIKASASRIKGLASH  279 (327)
Q Consensus       232 ~~~~~s~-~~~~l~~~----~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  279 (327)
                      +++.  | ++.++++.    ..++.|.+||.. ++.+.++.... ....++|-
T Consensus       272 i~vd--p~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~-~P~~~~~~  320 (328)
T 3dsm_A          272 LTVN--PNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGI-IPGAFCWK  320 (328)
T ss_dssp             EEEC--TTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEE-SEEEEEEE
T ss_pred             EEEc--CCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEecc-CcceEEEe
Confidence            8884  7 55666665    578999999987 88888876433 33555553

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.84  E-value=9.2e-18  Score=134.86  Aligned_cols=240  Identities=13%  Similarity=0.110  Sum_probs=170.7

Q ss_pred             cccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482          48 GALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN  126 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  126 (327)
                      ..+..+.....+++|+|+++ +++++..++.|..|+..++  ...+ ..+... +.+++++++++++++...++.|.+||
T Consensus        21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~-~~~~~~-~~~l~~~~dg~l~v~~~~~~~i~~~d   96 (296)
T 3e5z_A           21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE-MHPSHH-QNGHCLNKQGHLIACSHGLRRLERQR   96 (296)
T ss_dssp             EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE-ESSCSS-EEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred             EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE-ECCCCC-cceeeECCCCcEEEEecCCCeEEEEc
Confidence            34444556678999999998 7788888999999999877  4555 445555 89999999999877776678999999


Q ss_pred             cCCCceeeeeeccccCccccceEEEEEccCCcEEEe----ec--------------CCeEEEEEecCCceeeEecCCCce
Q psy7482         127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI----PI--------------QNKAVVFSVEKAGVLQTLKSESKV  188 (327)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~--------------~~~i~i~d~~~~~~~~~~~~~~~i  188 (327)
                      ..+++......... ......+..++++|+|+++++    +.              .+.|..++.. ++...........
T Consensus        97 ~~~g~~~~~~~~~~-~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~  174 (296)
T 3e5z_A           97 EPGGEWESIADSFE-GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP  174 (296)
T ss_dssp             STTCCEEEEECEET-TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE
T ss_pred             CCCCcEEEEeeccC-CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC
Confidence            98877543322111 111223678999999998886    32              2466666655 5444444466678


Q ss_pred             eEEEeecC-ceEEEeCCCCcEEEEEcC-CCce---eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482         189 HSVCFLNE-TTVCTGNEESAITAYNLT-DGSH---LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       189 ~~~~~~~~-~~l~~~~~d~~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                      ..++|+|+ +.+++.+.++.|.+|++. +++.   ...+..+...+..+++  +++|+++++.  ++.|.+||.. ++.+
T Consensus       175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~--d~~G~l~v~~--~~~v~~~~~~-g~~~  249 (296)
T 3e5z_A          175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRV--DAGGLIWASA--GDGVHVLTPD-GDEL  249 (296)
T ss_dssp             EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEE--BTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred             ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEE--CCCCCEEEEc--CCeEEEECCC-CCEE
Confidence            89999999 566777788999999997 4443   2233334455678888  4899877666  7899999975 7788


Q ss_pred             EEeecccCceEEEeee-C--cEEEEEecCCcEEEEEccCc
Q psy7482         264 WHIKASASRIKGLASH-R--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       264 ~~~~~~~~~v~~~~~~-~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ..+..+.. +.+++|. |  +.|++++.++ +.-++..+.
T Consensus       250 ~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~  287 (296)
T 3e5z_A          250 GRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR  287 (296)
T ss_dssp             EEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred             EEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence            88887777 8999995 5  5777777653 333344443

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.83  E-value=2.3e-18  Score=153.81  Aligned_cols=246  Identities=11%  Similarity=0.054  Sum_probs=168.9

Q ss_pred             cccccccccEEEEEECCCCCeEEEe--cCCCcEEEEEcCCCeEEEeEEecccCCcee---------eEEEe--cCCCE-E
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISC--SDDGSIAIFRVGSWQLEKLFKKAHKGTAVN---------HISIH--PSGKL-A  113 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l  113 (327)
                      ..+.+|...+..++|+++.-+++..  +.++...||....+.....+ ..+... +.         ...|+  |||+. |
T Consensus        17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l-~~~~~~-~~~~~~~~~~~~~~~~~SPDg~~~l   94 (662)
T 3azo_A           17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESA-LPAPWN-VRNRVFEYSGFPWAGVPRPAGGPLL   94 (662)
T ss_dssp             HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEES-SCTTCC-BCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred             HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCccee-CCCCcc-ccccccccCCccceeeeecCCCeEE
Confidence            3456788999999999887666766  66888999996544444455 444433 55         56666  99988 7


Q ss_pred             EEEeC-CCCEEEEEcC--C-CceeeeeeccccCccccceEEEEEccCCcEEEeec-C----------CeEEEEEecC---
Q psy7482         114 LSVGK-DKTLRTWNLV--K-GRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q----------NKAVVFSVEK---  175 (327)
Q Consensus       114 ~~~~~-dg~i~iwd~~--~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~----------~~i~i~d~~~---  175 (327)
                      +.++. +..|.++++.  . ++....... ....+...+..++|+|||+.|+.++ +          ..|++||+.+   
T Consensus        95 a~~~~~~~~l~~~~~~~~g~~~~~~l~~~-~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  173 (662)
T 3azo_A           95 VFTHFGDQRLYAFEPDAPGGAVPRPLTPV-SAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA  173 (662)
T ss_dssp             EEEBTTTCCEEEECTTSTTCCCCEECSCC-CCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred             EEEECCCCeEEEEcCCCCCCCCCEeccCC-ccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence            76654 5667777765  2 433222211 1001233488999999999888776 4          5899999988   


Q ss_pred             ---CceeeEe-cCCCceeEEEeecC-ceEEEeCCC--------CcEEEEEcC-CC---ceeEEeeecccceEEEEEEecC
Q psy7482         176 ---AGVLQTL-KSESKVHSVCFLNE-TTVCTGNEE--------SAITAYNLT-DG---SHLWQIKASASRIKGLVFFSIP  238 (327)
Q Consensus       176 ---~~~~~~~-~~~~~i~~~~~~~~-~~l~~~~~d--------~~i~i~d~~-~~---~~~~~~~~~~~~v~~~~~~~s~  238 (327)
                         ++..... .+...+..++|+|| ++|+.++.+        ..|++||+. ++   +.......+...+..+.|  +|
T Consensus       174 ~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~--sp  251 (662)
T 3azo_A          174 ADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEW--AP  251 (662)
T ss_dssp             TCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEE--CT
T ss_pred             ccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEE--CC
Confidence               6554444 45567888999999 667766543        479999998 56   333334455678999999  49


Q ss_pred             CCcEEEEecCCC--eEEEEEcCCCceeEEeecccCc--------eEEEeeeC--cEEEEEecCCcEEEEEccC
Q psy7482         239 QETTVCTGNEES--AITAYNLTDGSHLWHIKASASR--------IKGLASHR--NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       239 ~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~--------v~~~~~~~--~~l~~~~~dg~v~iw~~~~  299 (327)
                      +|+++++++.++  .|.+||+.+++.......+...        +..++|++  .++++++. +.+++|.++.
T Consensus       252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~  323 (662)
T 3azo_A          252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDP  323 (662)
T ss_dssp             TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEET
T ss_pred             CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEEC
Confidence            999888888888  6777777666654444333322        56788887  78888888 9999995543

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.83  E-value=9.7e-16  Score=123.03  Aligned_cols=280  Identities=10%  Similarity=0.055  Sum_probs=192.5

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      +.+.+..+...+.++++  ++++.++...++.|.+||.. ++... ....+...+.++++.+++.++++...++.|..|+
T Consensus         6 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~   84 (299)
T 2z2n_A            6 QELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRIT   84 (299)
T ss_dssp             EEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred             EEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEEC
Confidence            34555567788999999  67777776668899999987 54332 1223456789999999998888777788899999


Q ss_pred             cCCCeEEEeEEec-ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          83 VGSWQLEKLFKKA-HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        83 ~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      .. ++. ..+... .... +..+++.+++.++++...++.|..||. +++.... .....   ...+..+++++++.+++
T Consensus        85 ~~-g~~-~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~~~---~~~~~~i~~~~~g~l~v  156 (299)
T 2z2n_A           85 KK-GII-KEYTLPNPDSA-PYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREY-ELPNK---GSYPSFITLGSDNALWF  156 (299)
T ss_dssp             TT-SCE-EEEECSSTTCC-EEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSST---TCCEEEEEECTTSCEEE
T ss_pred             CC-CcE-EEEeCCCcCCC-ceeeEECCCCCEEEEecCCceEEEECC-CCCEEEe-cCCCC---CCCCceEEEcCCCCEEE
Confidence            76 443 233122 2334 899999999988777777889999998 5544322 22211   23488999999998888


Q ss_pred             eec-CCeEEEEEecCCceeeE-ec-CCCceeEEEeecCc-eEEEeCCCCcEEEEEcCCCceeEE-eeecccceEEEEEEe
Q psy7482         162 IPI-QNKAVVFSVEKAGVLQT-LK-SESKVHSVCFLNET-TVCTGNEESAITAYNLTDGSHLWQ-IKASASRIKGLVFFS  236 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~~~~~-~~-~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~  236 (327)
                      +.. ++.|..||. +++.... .. ....+..+++++++ ++++...++.|..||. +++.... ...+...+.++++  
T Consensus       157 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~--  232 (299)
T 2z2n_A          157 TENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITA--  232 (299)
T ss_dssp             EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE--
T ss_pred             EeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEE--
Confidence            776 789999998 6655432 22 34568899999984 4455556789999998 6654321 2234456888888  


Q ss_pred             cCCCcEEEEecCCCeEEEEEcCCCceeE-EeecccCceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         237 IPQETTVCTGNEESAITAYNLTDGSHLW-HIKASASRIKGLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       237 s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +++|+++++...++.|..||. +++... .+..+...+.++++ + ..|..+...+.+..++....
T Consensus       233 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~  296 (299)
T 2z2n_A          233 GAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKD  296 (299)
T ss_dssp             CSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred             CCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence            488887777767899999998 454222 23344567889999 7 55555544677777777654

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.83  E-value=3.1e-17  Score=131.75  Aligned_cols=236  Identities=10%  Similarity=0.037  Sum_probs=169.1

Q ss_pred             cCCccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          12 SHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      .+.....+++|  +++ +++++..++.|..||..++  ...+..+...+.+++++|+|+++++...++.|.+||..+++.
T Consensus        25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~  102 (296)
T 3e5z_A           25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW  102 (296)
T ss_dssp             CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred             cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence            35566778888  677 7888888999999999876  555666777899999999999888777778999999988776


Q ss_pred             EEeEEecc---cCCceeeEEEecCCCEEEEE----e-------------CCCCEEEEEcCCCceeeeeeccccCccccce
Q psy7482          89 EKLFKKAH---KGTAVNHISIHPSGKLALSV----G-------------KDKTLRTWNLVKGRSAYITNLSSYGVGFENL  148 (327)
Q Consensus        89 ~~~~~~~~---~~~~v~~~~~~~~~~~l~~~----~-------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v  148 (327)
                      .... ...   ....+..++++|+|+++++.    +             ..+.|..++.. ++.......      ....
T Consensus       103 ~~~~-~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~------~~~~  174 (296)
T 3e5z_A          103 ESIA-DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD------RVKP  174 (296)
T ss_dssp             EEEE-CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC------CSSE
T ss_pred             EEEe-eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC------CCCC
Confidence            5443 211   11126789999999988873    2             12455556554 433222111      1237


Q ss_pred             EEEEEccCCcEEEeec-CCeEEEEEec-CCce---eeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482         149 DSVVWSPEGLLYAIPI-QNKAVVFSVE-KAGV---LQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       149 ~~~~~~~~~~~l~~~~-~~~i~i~d~~-~~~~---~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  222 (327)
                      ..++|+|+++.+++.. ++.|.+||+. +++.   ...+. ....+..+++++++.++++. ++.|.+||.. ++.+..+
T Consensus       175 ~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~  252 (296)
T 3e5z_A          175 NGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRV  252 (296)
T ss_dssp             EEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEE
T ss_pred             ccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEE
Confidence            8999999999885555 7899999997 4444   22332 34556789999996666666 8899999986 7778888


Q ss_pred             eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         223 KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       223 ~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      ..+.. +.+++|. +++++.|++++.+ .+.-++..+.+.
T Consensus       253 ~~~~~-~~~~~f~-~~d~~~L~v~t~~-~l~~~~~~~~~~  289 (296)
T 3e5z_A          253 LTPQT-TSNLCFG-GPEGRTLYMTVST-EFWSIETNVRGL  289 (296)
T ss_dssp             ECSSC-CCEEEEE-STTSCEEEEEETT-EEEEEECSCCBC
T ss_pred             ECCCC-ceeEEEE-CCCCCEEEEEcCC-eEEEEEcccccc
Confidence            77777 8899996 3888888888765 455556655543

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.82  E-value=1.2e-16  Score=143.76  Aligned_cols=272  Identities=11%  Similarity=0.037  Sum_probs=181.0

Q ss_pred             eCCCEEEEecCC-----CeEEEEEccccccccc------cccccccEEEEEECCCCCeEEEecCCC-----cEEEEEcCC
Q psy7482          22 ATSKLAASSGAD-----ETVVLYDMVKRKQSGA------LMQHEGTITCLKFTPEGSHLISCSDDG-----SIAIFRVGS   85 (327)
Q Consensus        22 ~~~~~l~~~~~d-----g~v~~w~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw~~~~   85 (327)
                      .+|++++-...+     +.+.+.+...++....      -.+|...+..++|||||++|+.+..++     .|++||+.+
T Consensus        81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t  160 (710)
T 2xdw_A           81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG  160 (710)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred             EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence            577776644322     2344444444433211      123445688999999999998765543     899999999


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC----------------EEEEEcCCCceeeeeeccccCccccceE
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT----------------LRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      ++..... ..+ .. +..++|+|||+.|+.++.++.                |++|++.+++.......... .+...+.
T Consensus       161 g~~~~~~-~~~-~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~-~~~~~~~  236 (710)
T 2xdw_A          161 AKELPDV-LER-VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP-DEPKWMG  236 (710)
T ss_dssp             TEEEEEE-EEE-EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT-TCTTCEE
T ss_pred             CCCCccc-ccC-cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC-CCCeEEE
Confidence            9877643 222 22 678999999999999888766                99999988764322211111 1122367


Q ss_pred             EEEEccCCcEEEeec------CCeEEEEEecC------Cc-eeeEec-CCCceeEEEeecC-ceEEEeCC----CCcEEE
Q psy7482         150 SVVWSPEGLLYAIPI------QNKAVVFSVEK------AG-VLQTLK-SESKVHSVCFLNE-TTVCTGNE----ESAITA  210 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~------~~~i~i~d~~~------~~-~~~~~~-~~~~i~~~~~~~~-~~l~~~~~----d~~i~i  210 (327)
                      .+.|+|+|++|+...      +..+++||+.+      +. ....+. +...+.. .|+|+ +.++..+.    .+.|.+
T Consensus       237 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~  315 (710)
T 2xdw_A          237 GAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLIN  315 (710)
T ss_dssp             EEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEE
T ss_pred             EEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEE
Confidence            899999999887664      45899999986      43 344444 4444444 47776 55554433    346999


Q ss_pred             EEcCCCce--eEEeeeccc--ceEEEEEEecCCCcEEEEecCCCe--EEEEEcCCCceeEEeecccCceEEEeeeC--cE
Q psy7482         211 YNLTDGSH--LWQIKASAS--RIKGLVFFSIPQETTVCTGNEESA--ITAYNLTDGSHLWHIKASASRIKGLASHR--NH  282 (327)
Q Consensus       211 ~d~~~~~~--~~~~~~~~~--~v~~~~~~~s~~~~~l~~~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~  282 (327)
                      ||+.++..  ...+..|..  .+..+.+.  +++.++++...|+.  |.+|++.+++.+..+..+.+.+..+.++|  ..
T Consensus       316 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~  393 (710)
T 2xdw_A          316 IDFTDPEESKWKVLVPEHEKDVLEWVACV--RSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTE  393 (710)
T ss_dssp             EETTSCCGGGCEEEECCCSSCEEEEEEEE--TTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSE
T ss_pred             EeCCCCCcccceeccCCCCCCeEEEEEEE--cCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCE
Confidence            99987642  344444433  67788884  67888888888875  66678777887788888888889999988  34


Q ss_pred             EE-EEec---CCcEEEEEccCc
Q psy7482         283 LI-CITS---AGDLVVWELNED  300 (327)
Q Consensus       283 l~-~~~~---dg~v~iw~~~~~  300 (327)
                      ++ +.+.   .+.|+.||+.++
T Consensus       394 l~~~~ss~~~P~~i~~~d~~tg  415 (710)
T 2xdw_A          394 IFYQFTSFLSPGIIYHCDLTKE  415 (710)
T ss_dssp             EEEEEECSSCCCEEEEEETTSS
T ss_pred             EEEEEeCCCCCCEEEEEECCCC
Confidence            44 3333   467999999776

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.81  E-value=2.8e-16  Score=128.34  Aligned_cols=231  Identities=10%  Similarity=0.132  Sum_probs=159.1

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC----CcEEEEEc
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD----GSIAIFRV   83 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~   83 (327)
                      +.++...+.+++|  ++++++++..++.|.+||..+++.......+...+.+++++|+++++++...+    +.|.+||.
T Consensus        40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~  119 (333)
T 2dg1_A           40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE  119 (333)
T ss_dssp             EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred             EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence            3456677889999  78877888889999999998877655443466789999999999888877666    68999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      .+++....+........+..+.++|+++++++...      .+.|..+|..+++.......      ...+..++|+|++
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~i~~~~dg  193 (333)
T 2dg1_A          120 NGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN------ISVANGIALSTDE  193 (333)
T ss_dssp             TSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE------ESSEEEEEECTTS
T ss_pred             CCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC------CCcccceEECCCC
Confidence            87765534311112223899999999987776553      24566666655444322211      1227889999999


Q ss_pred             cEEEee-c-CCeEEEEEecC-CceeeEe--------cCCCceeEEEeecCceE-EEeCCCCcEEEEEcCCCceeEEeeec
Q psy7482         158 LLYAIP-I-QNKAVVFSVEK-AGVLQTL--------KSESKVHSVCFLNETTV-CTGNEESAITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       158 ~~l~~~-~-~~~i~i~d~~~-~~~~~~~--------~~~~~i~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~  225 (327)
                      +.+.++ . ++.|.+||..+ ++....+        .....+..+++++++.+ ++...++.|.+||. +++.+..+..+
T Consensus       194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~  272 (333)
T 2dg1_A          194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIP  272 (333)
T ss_dssp             SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECT
T ss_pred             CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcC
Confidence            855444 3 78999999964 3322211        11246788999998544 44556789999998 56666666544


Q ss_pred             cc------ceEEEEEEecCCCcEEEEecCC
Q psy7482         226 AS------RIKGLVFFSIPQETTVCTGNEE  249 (327)
Q Consensus       226 ~~------~v~~~~~~~s~~~~~l~~~~~d  249 (327)
                      ..      .+.+++|.  ++++.|+.++.+
T Consensus       273 ~~~~g~~~~~~~~~~~--~dg~~L~v~~~~  300 (333)
T 2dg1_A          273 GRDEGHMLRSTHPQFI--PGTNQLIICSND  300 (333)
T ss_dssp             TGGGTCSCBCCEEEEC--TTSCEEEEEEEC
T ss_pred             CCccccccCcceEEEC--CCCCEEEEEeCc
Confidence            33      58889994  888777655544

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.81  E-value=1.9e-17  Score=148.40  Aligned_cols=272  Identities=8%  Similarity=0.006  Sum_probs=177.4

Q ss_pred             EeCCCEEEEecCCC---eEEEE--Ecccccccccc------ccccccEEEEEECCCCCeEE-----EecCCCcEEEEEcC
Q psy7482          21 AATSKLAASSGADE---TVVLY--DMVKRKQSGAL------MQHEGTITCLKFTPEGSHLI-----SCSDDGSIAIFRVG   84 (327)
Q Consensus        21 ~~~~~~l~~~~~dg---~v~~w--~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~-----~~~~d~~i~iw~~~   84 (327)
                      ..+|++++....++   .-.+|  +...++....+      .+|...+..++|||||++||     .|+.+..|++||+.
T Consensus        76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~  155 (695)
T 2bkl_A           76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD  155 (695)
T ss_dssp             EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence            35788777655433   33444  44344332222      23555799999999999998     45556789999999


Q ss_pred             CCeEEEeEEecccCC-ceeeEEEecCCCEEEEEeCCCC-------------EEEEEcCCCceeeeeeccccCccccceEE
Q psy7482          85 SWQLEKLFKKAHKGT-AVNHISIHPSGKLALSVGKDKT-------------LRTWNLVKGRSAYITNLSSYGVGFENLDS  150 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~v~~  150 (327)
                      +++....   .+... ....++|+|||+.|+.++.|..             |++|++.++.......... ..+...+..
T Consensus       156 tg~~~~~---~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~-~~~~~~~~~  231 (695)
T 2bkl_A          156 SGEWSKV---DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER-TGDPTTFLQ  231 (695)
T ss_dssp             TCCBCSS---CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC-CCCTTCEEE
T ss_pred             CCCCcCC---cccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec-CCCCEEEEE
Confidence            9886411   11111 1267899999999999988776             9999998876322211111 111234789


Q ss_pred             EEEccCCcEEEeec-CC----eEEEEEecCCceeeEecCCCceeEEEeecCceEEEeC----CCCcEEEEEcCCCce--e
Q psy7482         151 VVWSPEGLLYAIPI-QN----KAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGN----EESAITAYNLTDGSH--L  219 (327)
Q Consensus       151 ~~~~~~~~~l~~~~-~~----~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~--~  219 (327)
                      +.|+|+|++++.+. ++    .|++++..+++......+...+....+.+++ ++..+    .++.|.+||+.+++.  .
T Consensus       232 ~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~  310 (695)
T 2bkl_A          232 SDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASW  310 (695)
T ss_dssp             EEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred             EEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCC
Confidence            99999999887765 44    6777766555544444455555666664446 54443    357899999987653  2


Q ss_pred             EEeeec--ccceEEEEEEecCCCcEEEEecCCCeEEEEEcC-CCceeEEeecc-cCceEEEeeeC--cEEE-EEe---cC
Q psy7482         220 WQIKAS--ASRIKGLVFFSIPQETTVCTGNEESAITAYNLT-DGSHLWHIKAS-ASRIKGLASHR--NHLI-CIT---SA  289 (327)
Q Consensus       220 ~~~~~~--~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~-~~~v~~~~~~~--~~l~-~~~---~d  289 (327)
                      ..+..+  ...+..+++   .++.++++...|+..++|.+. +++.+..+..+ .+.+..++++|  +.++ +.+   ..
T Consensus       311 ~~l~~~~~~~~l~~~~~---~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P  387 (695)
T 2bkl_A          311 KEIVPEDSSASLLSVSI---VGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTP  387 (695)
T ss_dssp             EEEECCCSSCEEEEEEE---ETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEE
T ss_pred             eEEecCCCCCeEEEEEE---ECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCC
Confidence            333333  445777887   377888899999988888665 46666666655 56788888888  4444 333   34


Q ss_pred             CcEEEEEccCc
Q psy7482         290 GDLVVWELNED  300 (327)
Q Consensus       290 g~v~iw~~~~~  300 (327)
                      +.|++||+.++
T Consensus       388 ~~v~~~d~~~g  398 (695)
T 2bkl_A          388 RQIYKTSVSTG  398 (695)
T ss_dssp             EEEEEEETTTC
T ss_pred             CEEEEEECCCC
Confidence            67999999876

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.81  E-value=1.8e-16  Score=129.30  Aligned_cols=285  Identities=9%  Similarity=0.058  Sum_probs=195.3

Q ss_pred             CCCEEEEecC-----CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCCe
Q psy7482          23 TSKLAASSGA-----DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQ   87 (327)
Q Consensus        23 ~~~~l~~~~~-----dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~   87 (327)
                      +++.+++...     ++.|.+.|..+++.+..+.....+ . ++++|||++++++.          .++.|.+||..+++
T Consensus        43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~  120 (386)
T 3sjl_D           43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL  120 (386)
T ss_dssp             CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred             CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence            7777776654     679999999999999888765555 4 99999999988775          35789999999999


Q ss_pred             EEEeEEecc-----cCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc-E
Q psy7482          88 LEKLFKKAH-----KGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL-L  159 (327)
Q Consensus        88 ~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~  159 (327)
                      ....+..+.     .+.....+.++|||++++++..  ++.|.++|+.+++.+..+.....        ...+....+ +
T Consensus       121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--------~~~~P~g~~~~  192 (386)
T 3sjl_D          121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--------YHIFPTAPDTF  192 (386)
T ss_dssp             EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--------EEEEEEETTEE
T ss_pred             EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--------ceeecCCCcee
Confidence            988884332     0112678999999999998864  68999999999998877765432        111222222 3


Q ss_pred             EEeecCCeEEEEEecC-CceeeEec-----CCCce-eEEEee-cCceEEEeCCCCcEEEEEcCCCc--eeEEee------
Q psy7482         160 YAIPIQNKAVVFSVEK-AGVLQTLK-----SESKV-HSVCFL-NETTVCTGNEESAITAYNLTDGS--HLWQIK------  223 (327)
Q Consensus       160 l~~~~~~~i~i~d~~~-~~~~~~~~-----~~~~i-~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~------  223 (327)
                      ++.+.||.+.+.++.. ++......     ...++ ....|. +++.++..+.+|.+++.|+....  .+..+.      
T Consensus       193 ~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~  272 (386)
T 3sjl_D          193 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAE  272 (386)
T ss_dssp             EEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred             EEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccc
Confidence            3344477777777765 44322111     11222 124564 56665556668999999997654  232222      


Q ss_pred             ----ecccceEEEEEEecCCCcEEEEecC----------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--c-EEEEE
Q psy7482         224 ----ASASRIKGLVFFSIPQETTVCTGNE----------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--N-HLICI  286 (327)
Q Consensus       224 ----~~~~~v~~~~~~~s~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~  286 (327)
                          ........+++.  ++++.++....          .+.|.+.|+.+++.+..+.... .++++++++  + +|++.
T Consensus       273 ~~~g~~p~g~q~~a~~--~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~t  349 (386)
T 3sjl_D          273 RADGWRPGGWQQVAYH--RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYAL  349 (386)
T ss_dssp             HHTTEEECSSSCEEEE--TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEE
T ss_pred             ccccccCCCcceeeEC--CCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEE
Confidence                011233446664  78877776532          2579999999999998887543 788999999  3 56665


Q ss_pred             -ecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         287 -TSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       287 -~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                       ..++.|.++|..+.     +.+.........+.|.+++|
T Consensus       350 n~~~~~VsViD~~t~-----k~~~~i~~~~~p~~l~~s~d  384 (386)
T 3sjl_D          350 STGDKTLYIHDAESG-----EELRSVNQLGHGPQVITTAD  384 (386)
T ss_dssp             ETTTTEEEEEETTTC-----CEEEEECCCCSSCCEEEECC
T ss_pred             cCCCCeEEEEECCCC-----cEEEEecCCCCCceeEECCc
Confidence             45899999999988     44455555566777888876

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.80  E-value=9.4e-17  Score=131.92  Aligned_cols=239  Identities=10%  Similarity=0.109  Sum_probs=162.5

Q ss_pred             ccEEEEEECCCCCeEEEec---------CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---C--
Q psy7482          55 GTITCLKFTPEGSHLISCS---------DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---K--  120 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g--  120 (327)
                      ..+..+++  ||+.++...         .++.|.+||+.+++... +     .. +..+.|+|||+.|+.++.+   +  
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l-----~~-~~~~~~SpDg~~la~~~~~~~~~~~   85 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I-----EN-ATMPRISPDGKKIAFMRANEEKKVS   85 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E-----ES-CEEEEECTTSSEEEEEEEETTTTEE
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c-----cc-CCCeEECCCCCEEEEEEeccCCCcc
Confidence            34677777  888877542         25679999998876432 2     33 8889999999999887754   2  


Q ss_pred             CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C---------------------------CeEEEEE
Q psy7482         121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------------------------NKAVVFS  172 (327)
Q Consensus       121 ~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------------------------~~i~i~d  172 (327)
                      .|.+||+.+++........      . +..+.|+|+++.|+.+. +                           ..|++||
T Consensus        86 ~l~~~~~~~g~~~~l~~~~------~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d  158 (347)
T 2gop_A           86 EIWVADLETLSSKKILEAK------N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD  158 (347)
T ss_dssp             EEEEEETTTTEEEEEEEES------E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred             eEEEEECCCCceEEEEcCC------C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence            3888888877655443321      2 78899999999887764 2                           5789999


Q ss_pred             ecCCceeeEecCCCceeEEEeecCceEEEeCCC------C-cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEE
Q psy7482         173 VEKAGVLQTLKSESKVHSVCFLNETTVCTGNEE------S-AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCT  245 (327)
Q Consensus       173 ~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d------~-~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~  245 (327)
                      +.+++.+..+... .+..+.|+|+++++++..+      . ...+|.+.+++ ...+..+ ..+..+    +|+|++|+.
T Consensus       159 ~~~~~~~~~l~~~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~----spdg~~l~~  231 (347)
T 2gop_A          159 TESEEVIEEFEKP-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV----DSDGERILL  231 (347)
T ss_dssp             TTTTEEEEEEEEE-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE----EECSSCEEE
T ss_pred             CCCCeEEeeecCC-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE----CCCCCEEEE
Confidence            9888764444433 7889999999955555433      2 34444444443 4444444 444443    389998887


Q ss_pred             ecCC--------CeEEEEEcCCCceeEEeecccCceEE-EeeeCcEEEEEecCCcEEEEEccCccCCCceeeeecCCCCc
Q psy7482         246 GNEE--------SAITAYNLTDGSHLWHIKASASRIKG-LASHRNHLICITSAGDLVVWELNEDVTREPQRVSATNDGCR  316 (327)
Q Consensus       246 ~~~d--------~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~  316 (327)
                      ++.+        ..|.+||  +++.......+...+.. +.|+..++++++.++.+++| +..+   ....+  ..+...
T Consensus       232 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~~g---~~~~~--~~~~~~  303 (347)
T 2gop_A          232 YGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLY-IWDG---EIKPI--AKGRHW  303 (347)
T ss_dssp             EECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTEEEEEEEETTEEEEE-EESS---SEEEE--ECSSSE
T ss_pred             EEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCcEEEEEecCCcEEEE-EcCC---ceEEE--ecCCCe
Confidence            6644        3688888  55555445556677776 88874577888899999999 8843   33333  233567


Q ss_pred             eEEEEeCC
Q psy7482         317 FTCLAIRP  324 (327)
Q Consensus       317 i~~l~~~p  324 (327)
                      |.+++|+|
T Consensus       304 v~~~~~s~  311 (347)
T 2gop_A          304 IMGFDVDE  311 (347)
T ss_dssp             EEEEEESS
T ss_pred             EEeeeeeC
Confidence            88999987

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.80  E-value=1.5e-17  Score=149.16  Aligned_cols=274  Identities=9%  Similarity=0.030  Sum_probs=176.7

Q ss_pred             cCCccEEEEEe--CCCEEE-----EecCCCeEEEEEccccccccccccccccE--EEEEECCCCCeEEEecCCCc-----
Q psy7482          12 SHTASVRSVAA--TSKLAA-----SSGADETVVLYDMVKRKQSGALMQHEGTI--TCLKFTPEGSHLISCSDDGS-----   77 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~-----~~~~dg~v~~w~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~-----   77 (327)
                      +|...+.+++|  ||++||     .|+.+..|++||+.+++.+..  .+...+  ..++|+|||+.|+.++.|..     
T Consensus       118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~  195 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV  195 (695)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred             CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence            46667888888  999998     555567899999999886511  111222  67899999999999888766     


Q ss_pred             --------EEEEEcCCCeEE--EeEE-ecccCCceeeEEEecCCCEEEEEeCCC----CEEEEEcCCCceeeeeeccccC
Q psy7482          78 --------IAIFRVGSWQLE--KLFK-KAHKGTAVNHISIHPSGKLALSVGKDK----TLRTWNLVKGRSAYITNLSSYG  142 (327)
Q Consensus        78 --------i~iw~~~~~~~~--~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~  142 (327)
                              |++|++.+++..  ..+. ..+... +..+.|+|||++|+.++.++    .|.+|+..+++.........  
T Consensus       196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~-~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~--  272 (695)
T 2bkl_A          196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTT-FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG--  272 (695)
T ss_dssp             GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTC-EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS--
T ss_pred             ccCCCCCEEEEEECCCCchhceEEEecCCCCEE-EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC--
Confidence                    999999887632  2221 223334 88999999999998887666    67777765554433322211  


Q ss_pred             ccccceEEEEEccCCcEEEeec----CCeEEEEEecCCce---eeEecC--CCceeEEEeecCceEEEeCCCCcEEEEEc
Q psy7482         143 VGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVEKAGV---LQTLKS--ESKVHSVCFLNETTVCTGNEESAITAYNL  213 (327)
Q Consensus       143 ~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~~~~~---~~~~~~--~~~i~~~~~~~~~~l~~~~~d~~i~i~d~  213 (327)
                          ......+ +++.+++.+.    ++.|.+||+.+++.   ...+.+  ...+..++++.+.++++...++..++|.+
T Consensus       273 ----~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~  347 (695)
T 2bkl_A          273 ----AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVA  347 (695)
T ss_dssp             ----CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred             ----ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEE
Confidence                1445555 5666444443    47899999987653   333333  45678888885577888888998888865


Q ss_pred             C-CCceeEEeeec-ccceEEEEEEecCCCcEEE----EecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEe
Q psy7482         214 T-DGSHLWQIKAS-ASRIKGLVFFSIPQETTVC----TGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICIT  287 (327)
Q Consensus       214 ~-~~~~~~~~~~~-~~~v~~~~~~~s~~~~~l~----~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~  287 (327)
                      . +++....+..+ ...+..+.+  +|+++.++    +....+.|++||+.+++. ..+..+......-.+....+..-+
T Consensus       348 ~~~g~~~~~l~~~~~~~v~~~~~--s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~~~~  424 (695)
T 2bkl_A          348 TLKGKPVRTVQLPGVGAASNLMG--LEDLDDAYYVFTSFTTPRQIYKTSVSTGKS-ELWAKVDVPMNPEQYQVEQVFYAS  424 (695)
T ss_dssp             ETTCCEEEECCCSSSSEECCCBS--CTTCSEEEEEEEETTEEEEEEEEETTTCCE-EEEEECCCSSCGGGEEEEEEEEEC
T ss_pred             eCCCCeeEEecCCCCeEEEEeec--CCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEEecCCCCCCHHHCeEEEEEEEC
Confidence            4 45556666554 556677777  47887766    334457899999988763 334433322100011123343444


Q ss_pred             cCC-cEEEEEcc
Q psy7482         288 SAG-DLVVWELN  298 (327)
Q Consensus       288 ~dg-~v~iw~~~  298 (327)
                      .|| .|..|-+.
T Consensus       425 ~dg~~i~~~~~~  436 (695)
T 2bkl_A          425 KDGTKVPMFVVH  436 (695)
T ss_dssp             TTSCEEEEEEEE
T ss_pred             CCCCEEEEEEEE
Confidence            555 57666543

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.80  E-value=1.3e-16  Score=143.37  Aligned_cols=240  Identities=12%  Similarity=0.080  Sum_probs=165.3

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCC-----eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCc-------
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADE-----TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS-------   77 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg-----~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------   77 (327)
                      +|...+..++|  ||++||.+..++     .|++||+.+++.......+ ..+..++|+|||+.|+.++.++.       
T Consensus       122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~  200 (710)
T 2xdw_A          122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT  200 (710)
T ss_dssp             TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred             CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence            35456788888  999998765433     8999999998876533222 23678999999999998887765       


Q ss_pred             ---------EEEEEcCCCeEE--EeEEe-cccCCceeeEEEecCCCEEEEEeC-----CCCEEEEEcCC------Cc-ee
Q psy7482          78 ---------IAIFRVGSWQLE--KLFKK-AHKGTAVNHISIHPSGKLALSVGK-----DKTLRTWNLVK------GR-SA  133 (327)
Q Consensus        78 ---------i~iw~~~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~~-~~  133 (327)
                               |++|++.+++..  ..+.. .+... +..+.|+|||++|+.++.     +..|.+||+.+      +. ..
T Consensus       201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~-~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~  279 (710)
T 2xdw_A          201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW-MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW  279 (710)
T ss_dssp             CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC-EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred             ccccCCCCEEEEEECCCCcccceEEeccCCCCeE-EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence                     999999877632  22211 12333 778999999999888765     56899999976      43 22


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeec-----CCeEEEEEecCCce---eeEecCCC--ceeEEEeecC-ceEEEe
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKAGV---LQTLKSES--KVHSVCFLNE-TTVCTG  202 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~~~---~~~~~~~~--~i~~~~~~~~-~~l~~~  202 (327)
                      ..+.....     .+.. .|+|+|..|+..+     .+.|.+||+.+++.   ...+.+..  .+..++|+++ .++++.
T Consensus       280 ~~l~~~~~-----~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~  353 (710)
T 2xdw_A          280 VKLIDNFE-----GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY  353 (710)
T ss_dssp             EEEECSSS-----SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE
T ss_pred             EEeeCCCC-----cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE
Confidence            22222211     1333 4888888766553     24799999987642   23333433  6888999966 566777


Q ss_pred             CCCCc--EEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEe----cCCCeEEEEEcCCCc
Q psy7482         203 NEESA--ITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTG----NEESAITAYNLTDGS  261 (327)
Q Consensus       203 ~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~----~~d~~i~i~d~~~~~  261 (327)
                      ..++.  |.+|++.+++.+..+..+.+.+..+.+  +|++..++..    ...+.++.||+.+++
T Consensus       354 ~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~--s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          354 LHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSG--QKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             EETTEEEEEEEETTTCCEEEEECCCSSEEEEEEC--CTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             EECCEEEEEEEECCCCCEEEecCCCCceEEEEec--CCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            77774  666787678777778777777888877  4787665532    345789999998877

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.79  E-value=3.1e-15  Score=129.56  Aligned_cols=278  Identities=10%  Similarity=0.055  Sum_probs=195.7

Q ss_pred             cEEEEEe--CCCEEEEecCCCeEEEEEcc--ccccccccccccccEEEEEEC----CCCCeEEEecC-CCcEEEEEcCCC
Q psy7482          16 SVRSVAA--TSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFT----PEGSHLISCSD-DGSIAIFRVGSW   86 (327)
Q Consensus        16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-d~~i~iw~~~~~   86 (327)
                      .+..+.+  |++++++++.|+.|.+||+.  +++.+..+.... ....++|+    |||++++++.. +++|.++|..+.
T Consensus       198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~  276 (567)
T 1qks_A          198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL  276 (567)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred             CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence            4556777  89999999999999999995  777777776533 46789999    69998887765 589999999999


Q ss_pred             eEEEeEEec---------ccCCceeeEEEecCCCE-EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC
Q psy7482          87 QLEKLFKKA---------HKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        87 ~~~~~~~~~---------~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  156 (327)
                      +.+..+...         |....+..+..++++.. ++....+|.|.++|....+..........    .....+.|+|+
T Consensus       277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~----~~~~d~~~~pd  352 (567)
T 1qks_A          277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE----RFLHDGGLDGS  352 (567)
T ss_dssp             CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC----SSEEEEEECTT
T ss_pred             cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc----ccccCceECCC
Confidence            988877432         12223778888887654 44455679999999877654333332221    12778899999


Q ss_pred             CcEEEeec--CCeEEEEEecCCceeeEecC-CCce---eEEE-eecC-ceEE-EeC-CCCcEEEEEcCC-------Ccee
Q psy7482         157 GLLYAIPI--QNKAVVFSVEKAGVLQTLKS-ESKV---HSVC-FLNE-TTVC-TGN-EESAITAYNLTD-------GSHL  219 (327)
Q Consensus       157 ~~~l~~~~--~~~i~i~d~~~~~~~~~~~~-~~~i---~~~~-~~~~-~~l~-~~~-~d~~i~i~d~~~-------~~~~  219 (327)
                      +++++++.  ++.|.++|+.+++....+.. ....   .... ++|+ +.++ ++. .++.|.++|..+       .+.+
T Consensus       353 gr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv  432 (567)
T 1qks_A          353 HRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKIL  432 (567)
T ss_dssp             SCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred             CCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEE
Confidence            99887764  78999999999987766653 2111   1223 5776 5544 443 568999999987       5677


Q ss_pred             EEeeecccceEEEEEEecCCCcEEEEecC-------CCeEEEEEcCCC-----ce-eEEee--------cccCceEEEee
Q psy7482         220 WQIKASASRIKGLVFFSIPQETTVCTGNE-------ESAITAYNLTDG-----SH-LWHIK--------ASASRIKGLAS  278 (327)
Q Consensus       220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~-------d~~i~i~d~~~~-----~~-~~~~~--------~~~~~v~~~~~  278 (327)
                      +++......-..+..+  |+++++.+...       ...|.++|+.+.     .. ...+.        .....+..+.|
T Consensus       433 ~~i~~~g~g~~~i~~~--p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (567)
T 1qks_A          433 DSFPALGGGSLFIKTH--PNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEF  510 (567)
T ss_dssp             EEEECSCSCCCCEECC--TTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEE
T ss_pred             EEEecCCCCCEEEEeC--CCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeE
Confidence            7777554333445553  99999988663       358999999876     21 12332        12347889999


Q ss_pred             eC--cEEEEEe-----cCCcEEEEEccCc
Q psy7482         279 HR--NHLICIT-----SAGDLVVWELNED  300 (327)
Q Consensus       279 ~~--~~l~~~~-----~dg~v~iw~~~~~  300 (327)
                      ++  +.+..+.     .++.|.|+|..+.
T Consensus       511 ~~~G~~~~~s~~~~~~~~~~i~v~D~~t~  539 (567)
T 1qks_A          511 NKDGTEVWFSVWNGKDQESALVVVDDKTL  539 (567)
T ss_dssp             CTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred             CCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence            99  4444442     3788999998887

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.78  E-value=6.9e-16  Score=122.13  Aligned_cols=209  Identities=14%  Similarity=0.151  Sum_probs=160.4

Q ss_pred             CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc
Q psy7482          65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG  144 (327)
Q Consensus        65 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  144 (327)
                      .++.|++++.++.|.+||.++++.+..+ ..+....+.++.+.|+|++++  +.++.|..||. +++.+..+.....   
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~-~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~---   76 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEY-PLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAG---   76 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEE-ECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTT---
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEe-CCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC---
Confidence            4678999999999999999999999998 444422288999999999888  34678999998 7888887765321   


Q ss_pred             ccceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEecCC-------CceeEEEeecC-ceEEEeCCCCcEEEEEcC
Q psy7482         145 FENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLKSE-------SKVHSVCFLNE-TTVCTGNEESAITAYNLT  214 (327)
Q Consensus       145 ~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~~~-------~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~  214 (327)
                       ..+.++.+.|+|+++++..  ++.+..+|. +++.+..+...       .....++..++ +++++...++.|..||.+
T Consensus        77 -~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~  154 (276)
T 3no2_A           77 -CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN  154 (276)
T ss_dssp             -CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred             -ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence             2378899999999988865  567777775 67777766511       23445667777 788888899999999988


Q ss_pred             CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC------ceEEEeeeC--cEEEEE
Q psy7482         215 DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS------RIKGLASHR--NHLICI  286 (327)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------~v~~~~~~~--~~l~~~  286 (327)
                       ++.+.++.... ...++..  .++|+.+++++.++.|..+|..+++.++++..+..      .+..++..+  ..+++.
T Consensus       155 -G~~~w~~~~~~-~~~~~~~--~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~  230 (276)
T 3no2_A          155 -GQLLNSVKLSG-TPFSSAF--LDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN  230 (276)
T ss_dssp             -SCEEEEEECSS-CCCEEEE--CTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred             -CCEEEEEECCC-CccceeE--cCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence             99999987653 3445555  38999999999889999999999999999875431      256666666  555544

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.78  E-value=2.4e-16  Score=124.75  Aligned_cols=237  Identities=10%  Similarity=0.070  Sum_probs=163.3

Q ss_pred             cEEEEEe--CCCEEE-EecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          16 SVRSVAA--TSKLAA-SSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        16 ~v~~~~~--~~~~l~-~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      ...++++  ++++++ +...++.|.+||..+.........+...+.++++.++++++++.. ++.|.+||....... .+
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~  102 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL  102 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence            6778888  677666 546789999999765543322223335678899999998666655 889999998765433 22


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEE
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVF  171 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~  171 (327)
                      ....... +..+++.++++++++...++.|.+|+..+....... ..    ....+..++++++++++++.. ++.|.+|
T Consensus       103 ~~~~~~~-p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~----~~~~p~~i~~~~~g~l~v~~~~~~~i~~~  176 (270)
T 1rwi_B          103 PFDGLNY-PEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-FT----GLNDPDGVAVDNSGNVYVTDTDNNRVVKL  176 (270)
T ss_dssp             CCCSCSS-EEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-CC----SCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred             ecCCcCC-CcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-cc----cCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence            1222244 899999999987777777889999976544332211 11    112378899999999777765 7899999


Q ss_pred             EecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC
Q psy7482         172 SVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE  249 (327)
Q Consensus       172 d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d  249 (327)
                      |........... ....+..++++++ .++++...++.|.+||............+...+.++++  +++|+++++...+
T Consensus       177 ~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~--~~~g~l~v~~~~~  254 (270)
T 1rwi_B          177 EAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV--DSDRTVYVADRGN  254 (270)
T ss_dssp             CTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEE--CTTCCEEEEEGGG
T ss_pred             ecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEE--CCCCCEEEEECCC
Confidence            987765443322 3367889999998 45555567889999998765433322233356788998  4889988888899


Q ss_pred             CeEEEEEcCCCce
Q psy7482         250 SAITAYNLTDGSH  262 (327)
Q Consensus       250 ~~i~i~d~~~~~~  262 (327)
                      +.|+++++...+.
T Consensus       255 ~~v~~~~~~~~~~  267 (270)
T 1rwi_B          255 DRVVKLTSLEHHH  267 (270)
T ss_dssp             TEEEEECCCGGGS
T ss_pred             CEEEEEcCCCccc
Confidence            9999999876543

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.77  E-value=5.1e-16  Score=122.90  Aligned_cols=235  Identities=9%  Similarity=0.035  Sum_probs=162.9

Q ss_pred             cEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceee
Q psy7482          56 TITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY  134 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  134 (327)
                      ...++++++++++++ +...++.|.+|+..+....... ...... +.++++.++++++++.. ++.|..||....... 
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~-p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-  100 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP-FNGLYQ-PQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-  100 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECC-CCSCCS-CCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEe-eCCcCC-cceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-
Confidence            678999999998777 5477889999987655432221 223234 88999999998666555 889999998755432 


Q ss_pred             eeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEE
Q psy7482         135 ITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAY  211 (327)
Q Consensus       135 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~  211 (327)
                      ......    ...+..++++|+++++++.. ++.|.+|+..+........ ....+..++++++ .++++...++.|.+|
T Consensus       101 ~~~~~~----~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~  176 (270)
T 1rwi_B          101 VLPFDG----LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL  176 (270)
T ss_dssp             ECCCCS----CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred             eeecCC----cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence            221111    13388999999998777765 7899999765543322222 3346788999998 555555567899999


Q ss_pred             EcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecC
Q psy7482         212 NLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSA  289 (327)
Q Consensus       212 d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d  289 (327)
                      |............+...+..+++  +++|.++++...++.|.+|+............+...+.++++++  +++++...+
T Consensus       177 ~~~~~~~~~~~~~~~~~p~~i~~--d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~  254 (270)
T 1rwi_B          177 EAESNNQVVLPFTDITAPWGIAV--DEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN  254 (270)
T ss_dssp             CTTTCCEEECCCSSCCSEEEEEE--CTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred             ecCCCceEeecccCCCCceEEEE--CCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence            98776544333333356788888  48888888877889999999866544332223335789999998  777788889


Q ss_pred             CcEEEEEccCc
Q psy7482         290 GDLVVWELNED  300 (327)
Q Consensus       290 g~v~iw~~~~~  300 (327)
                      +.|+++++...
T Consensus       255 ~~v~~~~~~~~  265 (270)
T 1rwi_B          255 DRVVKLTSLEH  265 (270)
T ss_dssp             TEEEEECCCGG
T ss_pred             CEEEEEcCCCc
Confidence            99999999877

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.77  E-value=5.1e-14  Score=113.01  Aligned_cols=277  Identities=8%  Similarity=0.035  Sum_probs=188.0

Q ss_pred             EeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482           6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         6 ~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      +.+.+......+.++++  ++++.++...++.|.+||.. ++... .+......+..+++.+++++.++...++.|..+|
T Consensus        11 ~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d   89 (300)
T 2qc5_A           11 EEFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLS   89 (300)
T ss_dssp             EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred             EEEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEEC
Confidence            44555556678899998  67777777778999999987 54332 2223346789999999998877777788899999


Q ss_pred             cCCCeEEEeEEec-ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          83 VGSWQLEKLFKKA-HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        83 ~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      .. ++.. .+... .... +.++++.++++++++...++.|..+|.. ++... ......   ...+..+++.+++++++
T Consensus        90 ~~-g~~~-~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~~---~~~~~~i~~d~~g~l~v  161 (300)
T 2qc5_A           90 KK-GGFT-EYPLPQPDSG-PYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDLPNK---GSYPAFITLGSDNALWF  161 (300)
T ss_dssp             TT-SCEE-EEECSSTTCC-EEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EECSST---TCCEEEEEECTTSSEEE
T ss_pred             CC-CCeE-EecCCCCCCC-CccceECCCCCEEEEccCCCeEEEECCC-CCEEE-ccCCCC---CCCceeEEECCCCCEEE
Confidence            87 5553 23122 2334 8999999999877777667889999987 55432 222211   23488999999999777


Q ss_pred             eec-CCeEEEEEecCCceeeEe-c-CCCceeEEEeecCceE-EEeCCCCcEEEEEcCCCceeEE-eeecccceEEEEEEe
Q psy7482         162 IPI-QNKAVVFSVEKAGVLQTL-K-SESKVHSVCFLNETTV-CTGNEESAITAYNLTDGSHLWQ-IKASASRIKGLVFFS  236 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~~~~~~-~-~~~~i~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~  236 (327)
                      +.. ++.|..+|. +++..... . ....+..+++++++.+ ++....+.|..||. +++.... +..+...+.++++  
T Consensus       162 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~--  237 (300)
T 2qc5_A          162 TENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA--  237 (300)
T ss_dssp             EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE--
T ss_pred             EecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE--
Confidence            665 788999998 55544321 1 3456889999988544 44455678999998 4443332 2334456788888  


Q ss_pred             cCCCcEEEEecCCCeEEEEEcCCCcee-EEeecccCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482         237 IPQETTVCTGNEESAITAYNLTDGSHL-WHIKASASRIKGLASHR-NHLICITSAGDLVVWEL  297 (327)
Q Consensus       237 s~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~  297 (327)
                      +++|++.++...++.|..||. +++.. ..+......+.++++++ ..|..++.. .|..++.
T Consensus       238 d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p  298 (300)
T 2qc5_A          238 GKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNL  298 (300)
T ss_dssp             CSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEE
T ss_pred             CCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEccC-ceEEeCC
Confidence            478887777777799999998 44432 22333345678898888 445555544 5655554

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.76  E-value=4e-14  Score=116.86  Aligned_cols=261  Identities=9%  Similarity=0.006  Sum_probs=180.0

Q ss_pred             CCCEEEEecC--CC---eEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCCe
Q psy7482          23 TSKLAASSGA--DE---TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQ   87 (327)
Q Consensus        23 ~~~~l~~~~~--dg---~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~   87 (327)
                      +++++++...  ..   .|.++|..+++.+..+.....+  .++++||+++++++.          .++.|.+||..+.+
T Consensus        31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~  108 (373)
T 2mad_H           31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL  108 (373)
T ss_pred             CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence            7777776653  22   8899999999988777754444  899999999998875          36789999999988


Q ss_pred             EEEeEEec-c-----cCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeee-eeccccCccccceEEEEEccCCc
Q psy7482          88 LEKLFKKA-H-----KGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYI-TNLSSYGVGFENLDSVVWSPEGL  158 (327)
Q Consensus        88 ~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~  158 (327)
                      ....+..+ .     ... ...+.|+|||++|+++..  ++.|.++| .+++.... +....         ++.+.|++.
T Consensus       109 ~~~~i~~~~~~~~~~g~~-p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---------~~~~~~~~~  177 (373)
T 2mad_H          109 PIADIELPDAPRFDVGPY-SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---------CYHIHPGAP  177 (373)
T ss_pred             EEEEEECCCccccccCCC-ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---------eEEEEeCCC
Confidence            88777332 0     122 567899999999998874  47899999 98887655 43322         244555553


Q ss_pred             --EEEeecCCeEEEEEecCCceeeEec------CCCce-eEEEeecC-ceEEEeCCCCcEEEEEcCCCc--eeEEeeec-
Q psy7482         159 --LYAIPIQNKAVVFSVEKAGVLQTLK------SESKV-HSVCFLNE-TTVCTGNEESAITAYNLTDGS--HLWQIKAS-  225 (327)
Q Consensus       159 --~l~~~~~~~i~i~d~~~~~~~~~~~------~~~~i-~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~-  225 (327)
                        +++.+.||.+.++|. +++......      ...++ ....+.++ +.++..+..+.+.+.|+....  .+..+... 
T Consensus       178 ~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~  256 (373)
T 2mad_H          178 STFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALS  256 (373)
T ss_pred             ceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence              333334899999999 777663322      11121 23445555 444444477899999987543  22222211 


Q ss_pred             ---------ccceEEEEEEecCCCcEEEEecC----------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--c-EE
Q psy7482         226 ---------ASRIKGLVFFSIPQETTVCTGNE----------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--N-HL  283 (327)
Q Consensus       226 ---------~~~v~~~~~~~s~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l  283 (327)
                               ......+.+  +++++.+.++..          ++.|.++|..+++.+.++.... ...+++|+|  + ++
T Consensus       257 ~~~~~~~~~p~g~~~~~~--s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l  333 (373)
T 2mad_H          257 GGRKADTWRPGGWQQVAY--LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDL  333 (373)
T ss_pred             CcccccceecCceEeEEE--CCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEE
Confidence                     112333566  488887777543          3579999999999988886433 678999999  5 77


Q ss_pred             EEEe-cCCcEEEEEccCc
Q psy7482         284 ICIT-SAGDLVVWELNED  300 (327)
Q Consensus       284 ~~~~-~dg~v~iw~~~~~  300 (327)
                      +++. .++.|.++|..+.
T Consensus       334 ~v~~~~~~~V~ViD~~t~  351 (373)
T 2mad_H          334 YALSAGTEVLHIYDAGAG  351 (373)
T ss_pred             EEEcCCCCeEEEEECCCC
Confidence            7777 5899999999988

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.75  E-value=6.4e-14  Score=112.37  Aligned_cols=257  Identities=11%  Similarity=0.034  Sum_probs=174.7

Q ss_pred             cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc
Q psy7482          52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR  131 (327)
Q Consensus        52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  131 (327)
                      .+...+.++++.++|+.+++...++.|..||.. ++............ +.++++.+++.++++...++.|..||.. ++
T Consensus        12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~   88 (299)
T 2z2n_A           12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAK-VMCLTISSDGEVWFTENAANKIGRITKK-GI   88 (299)
T ss_dssp             SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCC-EEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred             CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCc-eeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence            344678999999999987777668899999988 55433221223344 8999999999887777667889999976 43


Q ss_pred             eeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe-c-CCCceeEEEeecCc-eEEEeCCCCc
Q psy7482         132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL-K-SESKVHSVCFLNET-TVCTGNEESA  207 (327)
Q Consensus       132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~-~-~~~~i~~~~~~~~~-~l~~~~~d~~  207 (327)
                      . ..+..+..   ...+..+++++++.++++.. ++.|..||. +++..... . ....+..+++.+++ .+++...++.
T Consensus        89 ~-~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~  163 (299)
T 2z2n_A           89 I-KEYTLPNP---DSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNA  163 (299)
T ss_dssp             E-EEEECSST---TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred             E-EEEeCCCc---CCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCE
Confidence            2 22222211   23488999999998888775 789999998 55443322 2 34578999999985 4455556789


Q ss_pred             EEEEEcCCCceeEE-eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE-EeecccCceEEEeeeC--cEE
Q psy7482         208 ITAYNLTDGSHLWQ-IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW-HIKASASRIKGLASHR--NHL  283 (327)
Q Consensus       208 i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~--~~l  283 (327)
                      |..||. +++.... .......+..+++  ++++.++++...++.|.+||. +++... ....+...+.++++++  .++
T Consensus       164 i~~~~~-~g~~~~~~~~~~~~~~~~i~~--~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~  239 (299)
T 2z2n_A          164 IGRITE-SGDITEFKIPTPASGPVGITK--GNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLW  239 (299)
T ss_dssp             EEEECT-TCCEEEEECSSTTCCEEEEEE--CTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred             EEEEcC-CCcEEEeeCCCCCCcceeEEE--CCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEE
Confidence            999998 6654332 2333455778888  478888777777889999998 665332 2333456789999998  544


Q ss_pred             EEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         284 ICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       284 ~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      ++...++.|..|+.. +   ....+........+.++++ ++
T Consensus       240 v~~~~~~~i~~~d~~-g---~~~~~~~~~~~~~~~~i~~-~~  276 (299)
T 2z2n_A          240 FTEWGANKIGRLTSN-N---IIEEYPIQIKSAEPHGICF-DG  276 (299)
T ss_dssp             EEETTTTEEEEEETT-T---EEEEEECSSSSCCEEEEEE-CS
T ss_pred             EeccCCceEEEECCC-C---ceEEEeCCCCCCccceEEe-cC
Confidence            444467889999983 3   2222222233456778877 54

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.74  E-value=1.2e-14  Score=117.51  Aligned_cols=238  Identities=12%  Similarity=0.121  Sum_probs=166.0

Q ss_pred             ccEEEEEECCCCCeEEE-------ecCCCcEEEEEcCCCeEEEeEEe----cccCCceeeEEEecC-CCEEEEEeCCCCE
Q psy7482          55 GTITCLKFTPEGSHLIS-------CSDDGSIAIFRVGSWQLEKLFKK----AHKGTAVNHISIHPS-GKLALSVGKDKTL  122 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~-------~~~d~~i~iw~~~~~~~~~~~~~----~~~~~~v~~~~~~~~-~~~l~~~~~dg~i  122 (327)
                      ....+++|.++++++++       +..++.|..||..+++..... .    ++... +.+++++++ +++++ ++..+.|
T Consensus        18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~-~~~i~~~~~~g~l~v-~~~~~~l   94 (314)
T 1pjx_A           18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC-KPEVNGYGGI-PAGCQCDRDANQLFV-ADMRLGL   94 (314)
T ss_dssp             TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE-CCEETTEECC-EEEEEECSSSSEEEE-EETTTEE
T ss_pred             CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEE-ecccCCCCCC-CceEEEecCCCcEEE-EECCCCE
Confidence            34678999999988777       677889999998877764332 2    13344 889999998 65444 4444579


Q ss_pred             EEEEcCCCceeee-eeccccCccccceEEEEEccCCcEEEeec-C---------------CeEEEEEecCCceeeEecCC
Q psy7482         123 RTWNLVKGRSAYI-TNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------------NKAVVFSVEKAGVLQTLKSE  185 (327)
Q Consensus       123 ~iwd~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------------~~i~i~d~~~~~~~~~~~~~  185 (327)
                      .+||.. ++.... .... .......+.+++++++++++++.. +               +.|..+|.. ++........
T Consensus        95 ~~~d~~-g~~~~~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~  171 (314)
T 1pjx_A           95 LVVQTD-GTFEEIAKKDS-EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF  171 (314)
T ss_dssp             EEEETT-SCEEECCSBCT-TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE
T ss_pred             EEEeCC-CCEEEEEeccC-CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC
Confidence            999987 664332 2111 111123488999999998887765 3               567777765 5544433444


Q ss_pred             CceeEEEee----cCc-eE-EEeCCCCcEEEEEcC-CCce-----eEEeeecc-cceEEEEEEecCCCcEEEEecCCCeE
Q psy7482         186 SKVHSVCFL----NET-TV-CTGNEESAITAYNLT-DGSH-----LWQIKASA-SRIKGLVFFSIPQETTVCTGNEESAI  252 (327)
Q Consensus       186 ~~i~~~~~~----~~~-~l-~~~~~d~~i~i~d~~-~~~~-----~~~~~~~~-~~v~~~~~~~s~~~~~l~~~~~d~~i  252 (327)
                      .....++++    |++ .+ ++...++.|.+||.. +++.     ...+..+. .....+++  +++|+++++...++.|
T Consensus       172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~--d~~G~l~v~~~~~~~i  249 (314)
T 1pjx_A          172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF--DEDNNLLVANWGSSHI  249 (314)
T ss_dssp             SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE--BTTCCEEEEEETTTEE
T ss_pred             CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE--CCCCCEEEEEcCCCEE
Confidence            557889999    984 54 444678899999986 4432     22233333 45778888  4899888887778899


Q ss_pred             EEEEcCCCceeEEeecccCceEEEeeeC--c-EEEEEecCCcEEEEEccCc
Q psy7482         253 TAYNLTDGSHLWHIKASASRIKGLASHR--N-HLICITSAGDLVVWELNED  300 (327)
Q Consensus       253 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+||..+++.+..+..+...+.+++|++  + ++++...++.|..|++...
T Consensus       250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            9999987877777777767899999988  5 4455556688999998765

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.73  E-value=7.5e-15  Score=132.58  Aligned_cols=271  Identities=10%  Similarity=0.000  Sum_probs=170.9

Q ss_pred             EeCCCEEEEecCCCe---EEEEEcc-----ccccccc-----c-ccccccEEEEEECCCCCeEEEecCC-----CcEEEE
Q psy7482          21 AATSKLAASSGADET---VVLYDMV-----KRKQSGA-----L-MQHEGTITCLKFTPEGSHLISCSDD-----GSIAIF   81 (327)
Q Consensus        21 ~~~~~~l~~~~~dg~---v~~w~~~-----~~~~~~~-----~-~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw   81 (327)
                      ..+|++++....++.   -.+|...     .++....     + .+|...+..++|+|||++|+.+..+     ..|++|
T Consensus       115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~  194 (741)
T 1yr2_A          115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV  194 (741)
T ss_dssp             EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred             EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence            357887775544332   4455433     3332221     1 2244478899999999999876543     469999


Q ss_pred             EcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC--------------EEEEEcCCCceeeeeeccccCccccc
Q psy7482          82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT--------------LRTWNLVKGRSAYITNLSSYGVGFEN  147 (327)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~  147 (327)
                      |+.+++.....  .+... +..++|+|| +.|+.+..++.              |++|++.++........... .+...
T Consensus       195 dl~tg~~~~~~--~~~~~-~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~-~~~~~  269 (741)
T 1yr2_A          195 GVADGKPLADE--LKWVK-FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATP-ELPKR  269 (741)
T ss_dssp             ETTTCCEEEEE--EEEEE-SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCT-TCTTC
T ss_pred             ECCCCCCCCcc--CCCce-eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccC-CCCeE
Confidence            99998875532  12211 457899999 98888877654              88999877653222212211 11123


Q ss_pred             eEEEEEccCCcEEEeec-C-----CeEEEEEecCC--ceeeEec-CCCceeEEEeecC-ceEEEeCC----CCcEEEEEc
Q psy7482         148 LDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKA--GVLQTLK-SESKVHSVCFLNE-TTVCTGNE----ESAITAYNL  213 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~--~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~----d~~i~i~d~  213 (327)
                      +..+.|+|||++++... +     ..|++||+.++  +....+. +........ +|+ +.|+..+.    ++.|.+||+
T Consensus       270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~  348 (741)
T 1yr2_A          270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDL  348 (741)
T ss_dssp             EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEEC
T ss_pred             EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeC
Confidence            78899999999877664 3     38999999877  4133443 444444443 365 66665544    455999998


Q ss_pred             CCC--ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC-CCceeEEeecc-cCceEEEeeeC--c-EEEEE
Q psy7482         214 TDG--SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT-DGSHLWHIKAS-ASRIKGLASHR--N-HLICI  286 (327)
Q Consensus       214 ~~~--~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~-~~~v~~~~~~~--~-~l~~~  286 (327)
                      .++  +....+..+...+..+.+   .++.++++...|+..++|.+. +++....+..+ .+.+..+.++|  + ++++.
T Consensus       349 ~~~~~~~~~l~~~~~~~l~~~~~---~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~  425 (741)
T 1yr2_A          349 SGSTPRFDTVVPESKDNLESVGI---AGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSF  425 (741)
T ss_dssp             SSSSCEEEEEECCCSSEEEEEEE---EBTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEE
T ss_pred             CCCccccEEEecCCCCeEEEEEE---ECCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEE
Confidence            874  233334445555666776   366788888889887777554 45566666643 56788899988  3 44443


Q ss_pred             e---cCCcEEEEEccCc
Q psy7482         287 T---SAGDLVVWELNED  300 (327)
Q Consensus       287 ~---~dg~v~iw~~~~~  300 (327)
                      +   ..+.|++||+.++
T Consensus       426 ss~~~P~~i~~~d~~tg  442 (741)
T 1yr2_A          426 SSFTQPATVLALDPATA  442 (741)
T ss_dssp             EETTEEEEEEEEETTTT
T ss_pred             cCCCCCCEEEEEECCCC
Confidence            3   3477999998775

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.72  E-value=3e-14  Score=115.26  Aligned_cols=236  Identities=10%  Similarity=0.144  Sum_probs=160.1

Q ss_pred             CCccEEEEEe--CCCEEEE-------ecCCCeEEEEEccccccccccc----cccccEEEEEECCC-CCeEEEecCCCcE
Q psy7482          13 HTASVRSVAA--TSKLAAS-------SGADETVVLYDMVKRKQSGALM----QHEGTITCLKFTPE-GSHLISCSDDGSI   78 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~-------~~~dg~v~~w~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~d~~i   78 (327)
                      .-....+++|  +++++++       +..++.|.+||..+++......    ++...+..++++++ ++++++.. .+.|
T Consensus        16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l   94 (314)
T 1pjx_A           16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGL   94 (314)
T ss_dssp             CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEE
T ss_pred             cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCE
Confidence            3445678888  6777777       5678899999987776542221    24567899999999 76555444 4479


Q ss_pred             EEEEcCCCeEEEe-EEe--cccCCceeeEEEecCCCEEEEEeCC---------------CCEEEEEcCCCceeeeeeccc
Q psy7482          79 AIFRVGSWQLEKL-FKK--AHKGTAVNHISIHPSGKLALSVGKD---------------KTLRTWNLVKGRSAYITNLSS  140 (327)
Q Consensus        79 ~iw~~~~~~~~~~-~~~--~~~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~~  140 (327)
                      .+||.. ++.... ...  ......+.+++++++++++++...+               +.|..+|.. ++........ 
T Consensus        95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-  171 (314)
T 1pjx_A           95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF-  171 (314)
T ss_dssp             EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE-
T ss_pred             EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC-
Confidence            999988 665443 211  1111227899999999877776554               567777765 4433222111 


Q ss_pred             cCccccceEEEEEc----cCCcEEEee-c-CCeEEEEEec-CCce-----eeEec-CC-CceeEEEeecCceE-EEeCCC
Q psy7482         141 YGVGFENLDSVVWS----PEGLLYAIP-I-QNKAVVFSVE-KAGV-----LQTLK-SE-SKVHSVCFLNETTV-CTGNEE  205 (327)
Q Consensus       141 ~~~~~~~v~~~~~~----~~~~~l~~~-~-~~~i~i~d~~-~~~~-----~~~~~-~~-~~i~~~~~~~~~~l-~~~~~d  205 (327)
                           .....++++    |+++.+.++ . ++.|.+||.. +++.     ...+. +. ..+..+++++++.+ ++...+
T Consensus       172 -----~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~  246 (314)
T 1pjx_A          172 -----QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS  246 (314)
T ss_dssp             -----SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred             -----CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence                 126788999    999655444 3 7899999986 4432     22222 22 56888999998544 444578


Q ss_pred             CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE-EEecCCCeEEEEEcCC
Q psy7482         206 SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV-CTGNEESAITAYNLTD  259 (327)
Q Consensus       206 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l-~~~~~d~~i~i~d~~~  259 (327)
                      +.|.+||..+++.+..+..+...+.++++  +++++.| ++...++.|..|++..
T Consensus       247 ~~i~~~d~~~g~~~~~~~~~~~~~~~i~~--~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          247 SHIEVFGPDGGQPKMRIRCPFEKPSNLHF--KPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             TEEEEECTTCBSCSEEEECSSSCEEEEEE--CTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CEEEEEcCCCCcEeEEEeCCCCCceeEEE--CCCCCEEEEEeCCCCeEEEEeCCC
Confidence            89999999877777777767677899999  4899844 5556678999999864

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.71  E-value=2.8e-14  Score=118.53  Aligned_cols=263  Identities=10%  Similarity=0.051  Sum_probs=181.0

Q ss_pred             CCCEEEEecC-C----CeEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCCe
Q psy7482          23 TSKLAASSGA-D----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQ   87 (327)
Q Consensus        23 ~~~~l~~~~~-d----g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~   87 (327)
                      +++.+++... +    +.|.++|..+++.+..+..-..+  .++++||+++|+++.          .++.|.++|..+++
T Consensus        83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~  160 (426)
T 3c75_H           83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL  160 (426)
T ss_dssp             CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred             CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence            6666555543 2    69999999999999888865555  899999999988876          36789999999999


Q ss_pred             EEEeEEec-c-----cCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC-c
Q psy7482          88 LEKLFKKA-H-----KGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG-L  158 (327)
Q Consensus        88 ~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~  158 (327)
                      .+..+..+ .     ... ...+.++|||++++++..  ++.|.+.|+.+++.+..+.....         ....|++ .
T Consensus       161 vv~~I~v~g~~r~~~g~~-P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---------~~~~p~g~~  230 (426)
T 3c75_H          161 PIADIELPDAPRFLVGTY-QWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---------YHIFPASPT  230 (426)
T ss_dssp             EEEEEEETTCCCCCBSCC-GGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---------EEEEEEETT
T ss_pred             EEEEEECCCccccccCCC-cceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---------eeeccCCCc
Confidence            98887433 1     122 567899999999999874  57899999999988777665331         1223332 2


Q ss_pred             -EEEeecCCeEEEEEecCCceeeE----ec-CCCc-eeEEEeecC-ceEEEeCCCCcEEEEEcCCCcee--EEeee----
Q psy7482         159 -LYAIPIQNKAVVFSVEKAGVLQT----LK-SESK-VHSVCFLNE-TTVCTGNEESAITAYNLTDGSHL--WQIKA----  224 (327)
Q Consensus       159 -~l~~~~~~~i~i~d~~~~~~~~~----~~-~~~~-i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~--~~~~~----  224 (327)
                       +++.+.||.+.+.+..+++....    +. ...+ ...+.+.++ +.++.....+.+.+.|.......  ..+..    
T Consensus       231 ~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~  310 (426)
T 3c75_H          231 VFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEA  310 (426)
T ss_dssp             EEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTT
T ss_pred             EEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccc
Confidence             23333467777777655544422    22 1111 123456777 55555567789999998655421  11110    


Q ss_pred             ------cccceEEEEEEecCCCcEEEEecC----------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--c-EEEE
Q psy7482         225 ------SASRIKGLVFFSIPQETTVCTGNE----------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--N-HLIC  285 (327)
Q Consensus       225 ------~~~~v~~~~~~~s~~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~  285 (327)
                            .......+++.  ++++.+++...          ++.|.++|..+.+.+.++.... ...+++|+|  + ++++
T Consensus       311 ~i~~g~~p~g~~~va~s--~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv  387 (426)
T 3c75_H          311 ERADDWRPGGWQQTAYH--RQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYA  387 (426)
T ss_dssp             TGGGTEEECSSSCEEEE--GGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEE
T ss_pred             ccccccccCCceeeEEc--CCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEE
Confidence                  01112235674  78877666532          3579999999999998887543 578999999  5 7888


Q ss_pred             Ee-cCCcEEEEEccCc
Q psy7482         286 IT-SAGDLVVWELNED  300 (327)
Q Consensus       286 ~~-~dg~v~iw~~~~~  300 (327)
                      .. .++.|.++|..+.
T Consensus       388 ~n~~s~~VsVID~~t~  403 (426)
T 3c75_H          388 LSAGTQTLHIYDAATG  403 (426)
T ss_dssp             EETTTTEEEEEETTTC
T ss_pred             EcCCCCeEEEEECCCC
Confidence            77 5899999999988

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.70  E-value=8.5e-14  Score=115.62  Aligned_cols=265  Identities=11%  Similarity=0.148  Sum_probs=177.7

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccc---------cccEE-EEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQH---------EGTIT-CLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~---------~~~v~-~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      .+..+++++.++.|..+|..+++.+......         ...+. .+..  ++..++.++.++.|..+|..+++.....
T Consensus        52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~  129 (376)
T 3q7m_A           52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQT  129 (376)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred             ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence            5677778888999999999999887655432         12222 2222  3567888888999999999999988766


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEE
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFS  172 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d  172 (327)
                       ...... .......  +..++.++.++.|..+|.++++....................... ++.+++...++.+..+|
T Consensus       130 -~~~~~~-~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d  204 (376)
T 3q7m_A          130 -KVAGEA-LSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVL  204 (376)
T ss_dssp             -ECSSCC-CSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEE
T ss_pred             -eCCCce-EcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEE
Confidence             222211 1222222  447888888999999999999988776654331100000111112 44444444489999999


Q ss_pred             ecCCceeeEecCCCc-----------eeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCc
Q psy7482         173 VEKAGVLQTLKSESK-----------VHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET  241 (327)
Q Consensus       173 ~~~~~~~~~~~~~~~-----------i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~  241 (327)
                      ..+++.+.......+           +.......++.+++++.++.+..+|.++++.+.....  .....+..    ++.
T Consensus       205 ~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~----~~~  278 (376)
T 3q7m_A          205 MEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV----DGN  278 (376)
T ss_dssp             TTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE----ETT
T ss_pred             CCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE----ECC
Confidence            999998877763221           1111111247788888899999999999998876643  22334443    466


Q ss_pred             EEEEecCCCeEEEEEcCCCceeEEeec-ccCceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         242 TVCTGNEESAITAYNLTDGSHLWHIKA-SASRIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .++.++.++.+..+|..+++.++.... ....+.........|+.++.+|.|.++|..++
T Consensus       279 ~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG  338 (376)
T 3q7m_A          279 RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDG  338 (376)
T ss_dssp             EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTC
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCC
Confidence            777777899999999999998887763 22233444445588889999999999999887

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.70  E-value=1.3e-14  Score=131.11  Aligned_cols=238  Identities=13%  Similarity=0.090  Sum_probs=156.1

Q ss_pred             cCCccEEEEEe--CCCEEEEecCC-----CeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCc-------
Q psy7482          12 SHTASVRSVAA--TSKLAASSGAD-----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS-------   77 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~d-----g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------   77 (327)
                      +|...+..++|  ||++||.++.+     ..|++||+.+++.+.. ..+...+..++|+|| +.|+.++.++.       
T Consensus       160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~  237 (741)
T 1yr2_A          160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ  237 (741)
T ss_dssp             ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred             CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence            34446777888  99999876543     4699999999886543 112222357899999 98888776554       


Q ss_pred             -------EEEEEcCCCeE--EEeEEecc--cCCceeeEEEecCCCEEEEEeCCC-----CEEEEEcCCC--ceeeeeecc
Q psy7482          78 -------IAIFRVGSWQL--EKLFKKAH--KGTAVNHISIHPSGKLALSVGKDK-----TLRTWNLVKG--RSAYITNLS  139 (327)
Q Consensus        78 -------i~iw~~~~~~~--~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~~~~~  139 (327)
                             |++|++.+++.  ...+ ...  ... +..+.|+|||++|+..+.++     .|.+||+.++  +....+...
T Consensus       238 ~~~~~~~v~~~~lgt~~~~~~lv~-~~~~~~~~-~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~  315 (741)
T 1yr2_A          238 ALNYNQTVWLHRLGTPQSADQPVF-ATPELPKR-GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD  315 (741)
T ss_dssp             -CCCCCEEEEEETTSCGGGCEEEE-CCTTCTTC-EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred             cCCCCCEEEEEECCCCchhCEEEe-ccCCCCeE-EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence                   88999977653  2222 222  223 78899999999988877544     7999999876  312222221


Q ss_pred             ccCccccceEEEEEccCCcEEEeec-----CCeEEEEEecCC--ceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEE
Q psy7482         140 SYGVGFENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKA--GVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAY  211 (327)
Q Consensus       140 ~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~--~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~  211 (327)
                      ..     ..... ++|+++.|+..+     ++.|.+||+.++  +....+. +...+..+.++.+.++++...++..++|
T Consensus       316 ~~-----~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~  389 (741)
T 1yr2_A          316 LK-----AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVL  389 (741)
T ss_dssp             SS-----SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEE
T ss_pred             CC-----ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEE
Confidence            11     13333 347887776654     356999998875  3333344 3445667888755778888888887777


Q ss_pred             EcC-CCceeEEeee-cccceEEEEEEecCCCcEEE----EecCCCeEEEEEcCCCc
Q psy7482         212 NLT-DGSHLWQIKA-SASRIKGLVFFSIPQETTVC----TGNEESAITAYNLTDGS  261 (327)
Q Consensus       212 d~~-~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~----~~~~d~~i~i~d~~~~~  261 (327)
                      .+. +++....+.. +...+..+.+.  |+++.++    +....+.|++||+.+++
T Consensus       390 ~~~~~g~~~~~l~~~~~~~v~~~~~s--~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          390 AFDLDGKPAGAVSLPGIGSASGLSGR--PGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             EEETTSCEEEECBCSSSCEEEEEECC--BTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             EEeCCCCceeeccCCCCeEEEEeecC--CCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            554 4555666654 35667777774  7777665    33445789999998876

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.68  E-value=7e-14  Score=114.13  Aligned_cols=241  Identities=10%  Similarity=0.129  Sum_probs=165.9

Q ss_pred             EEe--CCCEEEEec----------CCCeEEEEEcccccccccccccc-------ccEEEEEECCCCCeEEEecC--CCcE
Q psy7482          20 VAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQHE-------GTITCLKFTPEGSHLISCSD--DGSI   78 (327)
Q Consensus        20 ~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~i   78 (327)
                      +++  |+++++++.          .++.|.+||..+++.+..+.-..       .....++|+|||++++++..  ++.|
T Consensus        83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V  162 (386)
T 3sjl_D           83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV  162 (386)
T ss_dssp             EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred             EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence            555  899887765          36789999999998887764221       23557899999999888764  6899


Q ss_pred             EEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCC-CceeeeeeccccCccccce-EEEEE-cc
Q psy7482          79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK-GRSAYITNLSSYGVGFENL-DSVVW-SP  155 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~v-~~~~~-~~  155 (327)
                      .++|+.+++.+..+....    . ...+....+.+++.+.||.+.+.++.+ ++...... ........++ ....| .+
T Consensus       163 sVID~~t~~vv~tI~v~g----~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~-~~~~~~~~~~~~~~~~~~~  236 (386)
T 3sjl_D          163 GVVDLEGKAFKRMLDVPD----C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHT-EVFHPEDEFLINHPAYSQK  236 (386)
T ss_dssp             EEEETTTTEEEEEEECCS----E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEEC-CCCSCTTSCBCSCCEEETT
T ss_pred             EEEECCCCcEEEEEECCC----c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeec-ceeccccccccccceeEcC
Confidence            999999999998883221    1 122333456777888899999999876 55422111 1111111112 12355 46


Q ss_pred             CCcEEEeecCCeEEEEEecCCc--eeeEec-----------CCCceeEEEeecC-ceEEEeCC----------CCcEEEE
Q psy7482         156 EGLLYAIPIQNKAVVFSVEKAG--VLQTLK-----------SESKVHSVCFLNE-TTVCTGNE----------ESAITAY  211 (327)
Q Consensus       156 ~~~~l~~~~~~~i~i~d~~~~~--~~~~~~-----------~~~~i~~~~~~~~-~~l~~~~~----------d~~i~i~  211 (327)
                      +|+++.++.+|.+++.|..+..  ....+.           .......++++++ +++++...          .+.|.++
T Consensus       237 dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi  316 (386)
T 3sjl_D          237 AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL  316 (386)
T ss_dssp             TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred             CCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence            8877777778999999997654  333331           1233445777887 66555432          3579999


Q ss_pred             EcCCCceeEEeeecccceEEEEEEecCCCc-EEEE-ecCCCeEEEEEcCCCceeEEeecc
Q psy7482         212 NLTDGSHLWQIKASASRIKGLVFFSIPQET-TVCT-GNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       212 d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~~-~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                      |+++++.+.++.... .+..+++  +++++ +|++ ...++.|.++|..+++.+.++...
T Consensus       317 D~~t~kv~~~i~vg~-~~~~lav--s~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~  373 (386)
T 3sjl_D          317 DAKTGERLAKFEMGH-EIDSINV--SQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL  373 (386)
T ss_dssp             ETTTCCEEEEEEEEE-EECEEEE--CSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred             ECCCCeEEEEEECCC-CcceEEE--CCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence            999999998886543 5788999  48886 6655 455899999999999998888754

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.68  E-value=1.6e-12  Score=104.22  Aligned_cols=257  Identities=8%  Similarity=0.029  Sum_probs=173.2

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      ....+.++++.++|+..++...++.|.+||.. ++............ +..+++.+++++.++...++.|..+|.. ++.
T Consensus        18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~   94 (300)
T 2qc5_A           18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAK-VMCLIVSSLGDIWFTENGANKIGKLSKK-GGF   94 (300)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCC-EEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred             CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCc-ceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence            34568899999999988877778999999988 55543221222234 8999999999877776667889999987 554


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeE-ec-CCCceeEEEeecC-ceEEEeCCCCcE
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQT-LK-SESKVHSVCFLNE-TTVCTGNEESAI  208 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~-~~-~~~~i~~~~~~~~-~~l~~~~~d~~i  208 (327)
                      . .+.....   ...+..+++.++++++++.. ++.|..+|.. ++.... +. ....+..+++.++ .++++...++.|
T Consensus        95 ~-~~~~~~~---~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i  169 (300)
T 2qc5_A           95 T-EYPLPQP---DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI  169 (300)
T ss_dssp             E-EEECSST---TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred             E-EecCCCC---CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence            2 2322211   13488999999999888776 7899999987 554422 22 3467889999998 444455557889


Q ss_pred             EEEEcCCCceeEE-eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE-EeecccCceEEEeeeC--cEEE
Q psy7482         209 TAYNLTDGSHLWQ-IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW-HIKASASRIKGLASHR--NHLI  284 (327)
Q Consensus       209 ~i~d~~~~~~~~~-~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~--~~l~  284 (327)
                      ..+|. +++.... ...+...+..+++  ++++.+.++....+.|.+||. +++... .+..+...+.++++++  .+.+
T Consensus       170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~--d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v  245 (300)
T 2qc5_A          170 GRITN-TGKLEEYPLPTNAAAPVGITS--GNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWF  245 (300)
T ss_dssp             EEECT-TCCEEEEECSSTTCCEEEEEE--CTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred             EEECC-CCcEEEeeCCCCCCCcceEEE--CCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEE
Confidence            99998 5544321 2233446788888  478888777777788999998 554333 2333456788999998  5555


Q ss_pred             EEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         285 CITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       285 ~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +...++.|..|+.. +   .............+.++++.|+
T Consensus       246 ~~~~~~~i~~~~~~-g---~~~~~~~~~~~~~~~~i~~~~~  282 (300)
T 2qc5_A          246 TEWGANQIGRITND-N---TIQEYQLQTENAEPHGITFGKD  282 (300)
T ss_dssp             EETTTTEEEEECTT-S---CEEEEECCSTTCCCCCEEECTT
T ss_pred             eccCCCeEEEECCC-C---cEEEEECCccCCccceeEeCCC
Confidence            54456889999983 3   2222222223345667777664

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.68  E-value=7.1e-13  Score=106.30  Aligned_cols=217  Identities=8%  Similarity=0.106  Sum_probs=150.3

Q ss_pred             ccEEEEEECCC-CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee
Q psy7482          55 GTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA  133 (327)
Q Consensus        55 ~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  133 (327)
                      .-..+..|+|+ +.++++...++.|..||..+++.. .+  ..... +.+++++++++++++ . ++.|.+||.++++..
T Consensus        13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~--~~~~~-~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~   86 (297)
T 3g4e_A           13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV--TMDAP-VSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV   86 (297)
T ss_dssp             SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE--ECSSC-EEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred             ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE--eCCCc-eEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence            34567889995 456667777899999999877652 33  22344 999999999995554 4 567999999887654


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeec-C---------CeEEEEEecC-CceeeEecCCCceeEEEeecC-ce-EE
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------NKAVVFSVEK-AGVLQTLKSESKVHSVCFLNE-TT-VC  200 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------~~i~i~d~~~-~~~~~~~~~~~~i~~~~~~~~-~~-l~  200 (327)
                      ........ .....+..++++|+|+++++.. .         ..-.+|.+.. ++.............++|+|+ +. ++
T Consensus        87 ~~~~~~~~-~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv  165 (297)
T 3g4e_A           87 VLATVDND-KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYY  165 (297)
T ss_dssp             EEEECCTT-CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred             EEEecCCC-CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEE
Confidence            43332211 1123488999999999777653 1         2234444432 333333334456789999998 44 45


Q ss_pred             EeCCCCcEEEEEc--CCCce-----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCce
Q psy7482         201 TGNEESAITAYNL--TDGSH-----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRI  273 (327)
Q Consensus       201 ~~~~d~~i~i~d~--~~~~~-----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v  273 (327)
                      +.+.++.|..|++  .++..     ...+..+......+++  +++|++.++...++.|..||..+++.+..+..+...+
T Consensus       166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~--d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~  243 (297)
T 3g4e_A          166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI--DAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT  243 (297)
T ss_dssp             EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE--BTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE
T ss_pred             ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE--CCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc
Confidence            6667889999997  45543     2222333456778888  4899888887778899999999899999998887789


Q ss_pred             EEEeee-C
Q psy7482         274 KGLASH-R  280 (327)
Q Consensus       274 ~~~~~~-~  280 (327)
                      ++++|. |
T Consensus       244 t~~~f~g~  251 (297)
T 3g4e_A          244 TSCCFGGK  251 (297)
T ss_dssp             EEEEEESG
T ss_pred             eEEEEeCC
Confidence            999998 5

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.67  E-value=3e-13  Score=112.31  Aligned_cols=267  Identities=10%  Similarity=0.126  Sum_probs=176.2

Q ss_pred             EEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC
Q psy7482          20 VAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT   99 (327)
Q Consensus        20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~   99 (327)
                      ...++..++.++.++.|..+|..+++.+................  +..++.++.++.|..+|..+++............
T Consensus        99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~  176 (376)
T 3q7m_A           99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL  176 (376)
T ss_dssp             EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC---
T ss_pred             ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce
Confidence            34467778888889999999999998876655432211111222  4578888889999999999999887762221100


Q ss_pred             ---ceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccc--cceEEEEEc---cCCcEEEeecCCeEEEE
Q psy7482         100 ---AVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGF--ENLDSVVWS---PEGLLYAIPIQNKAVVF  171 (327)
Q Consensus       100 ---~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~v~~~~~~---~~~~~l~~~~~~~i~i~  171 (327)
                         ........  +..++.+..++.+..+|..+++..............  ..+..+.-.   .++.+++.+.++.+..+
T Consensus       177 ~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~  254 (376)
T 3q7m_A          177 SLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL  254 (376)
T ss_dssp             --CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred             eecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence               00122222  446788888999999999999988776544321000  000001111   14445555558999999


Q ss_pred             EecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee-cccceEEEEEEecCCCcEEEEecCCC
Q psy7482         172 SVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEES  250 (327)
Q Consensus       172 d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~  250 (327)
                      |.++++.+....... ...+... ++.+++++.++.+..+|..+++.+..... ..........    .+..|+.++.+|
T Consensus       255 d~~tG~~~w~~~~~~-~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~----~~~~l~v~~~~g  328 (376)
T 3q7m_A          255 DLRSGQIMWKRELGS-VNDFIVD-GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL----YNGNLVVGDSEG  328 (376)
T ss_dssp             ETTTCCEEEEECCCC-EEEEEEE-TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE----ETTEEEEECTTS
T ss_pred             ECCCCcEEeeccCCC-CCCceEE-CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE----ECCEEEEEeCCC
Confidence            999999887766333 3344443 47788888899999999999998877652 2222333333    356788888899


Q ss_pred             eEEEEEcCCCceeEEeecccCceEE-EeeeCcEEEEEecCCcEEEEE
Q psy7482         251 AITAYNLTDGSHLWHIKASASRIKG-LASHRNHLICITSAGDLVVWE  296 (327)
Q Consensus       251 ~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v~iw~  296 (327)
                      .+.++|..+++.+.........+.. .......|+.++.+|.|+.|+
T Consensus       329 ~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~  375 (376)
T 3q7m_A          329 YLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT  375 (376)
T ss_dssp             EEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred             eEEEEECCCCcEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence            9999999999998887764433332 333348888899999999886

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.67  E-value=5.7e-14  Score=114.39  Aligned_cols=264  Identities=14%  Similarity=0.113  Sum_probs=180.7

Q ss_pred             CccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        14 ~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      ...+.++.. .+..+..++.+  |..+|. +++....+...........+.  +..|..++.++.|..+|.. ++.....
T Consensus        59 ~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~  132 (330)
T 3hxj_A           59 EIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRF  132 (330)
T ss_dssp             GEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEE
T ss_pred             CCcccceEEecCCcEEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEE
Confidence            344566666 35566666655  888886 676665555433323333333  4567778888999999988 7766665


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEE
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFS  172 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d  172 (327)
                       ...... +.++...+++. ++.++.++.|..+|.. ++..........     .+.++...+++.+++.+  +.+..+|
T Consensus       133 -~~~~~~-~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~-----~~~~~~~d~~g~l~v~t--~~l~~~d  201 (330)
T 3hxj_A          133 -KTKKAI-YATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDA-----ITSAASIGKDGTIYFGS--DKVYAIN  201 (330)
T ss_dssp             -ECSSCC-CSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSC-----CCSCCEECTTCCEEEES--SSEEEEC
T ss_pred             -cCCCce-eeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCC-----ceeeeEEcCCCEEEEEe--CEEEEEC
Confidence             333333 66677776776 6667788999999988 776655554322     26667777788776666  8899999


Q ss_pred             ecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCe
Q psy7482         173 VEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESA  251 (327)
Q Consensus       173 ~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~  251 (327)
                       .+++...... ....+.++...+++.+.+++.++.+..+| .+++.+..+......+..+..   ..+..|..++.+|.
T Consensus       202 -~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~---~~~g~l~v~t~~gg  276 (330)
T 3hxj_A          202 -PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVI---GNTDTIYFGSYDGH  276 (330)
T ss_dssp             -TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEE---CTTSCEEEECTTCE
T ss_pred             -CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceE---cCCCeEEEecCCCC
Confidence             7777776666 44567888888888888888888899997 456666666554444444554   33446777788889


Q ss_pred             EEEEEcCCCceeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         252 ITAYNLTDGSHLWHIKASASRIKGLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       252 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                      |..+|. +++.+..+......+.++...+ ..|..++.+|.+++...+..
T Consensus       277 l~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~  325 (330)
T 3hxj_A          277 LYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLEH  325 (330)
T ss_dssp             EEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred             EEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEecccc
Confidence            999995 7777777776666677777756 77888999999999887665

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.66  E-value=6.9e-13  Score=110.98  Aligned_cols=232  Identities=11%  Similarity=0.065  Sum_probs=157.5

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCce
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRS  132 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~  132 (327)
                      .....++|+++++++++...++.|+.||..+++..... .. ... .. ++|+++++.|+++..++  .|..++...+..
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~-~~-~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~  206 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVH-PG-FKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA  206 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEE-ET-CCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEee-cc-CCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence            35789999999998888777899999999887776555 33 222 34 99999999999888766  788888776544


Q ss_pred             eeee-eccccCccccceEEEEEcc-CCcEEEeecCCeEEEEEecCCceeeE----ecCC-Cc-ee-EEEeecC-c-eEEE
Q psy7482         133 AYIT-NLSSYGVGFENLDSVVWSP-EGLLYAIPIQNKAVVFSVEKAGVLQT----LKSE-SK-VH-SVCFLNE-T-TVCT  201 (327)
Q Consensus       133 ~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~i~i~d~~~~~~~~~----~~~~-~~-i~-~~~~~~~-~-~l~~  201 (327)
                      .... ....  .....+.+++++| ++.++++..++.|+.||..++.....    .... .. .. .++|+|+ + ++++
T Consensus       207 ~~~~g~~~~--~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~  284 (409)
T 3hrp_A          207 PTRIGQLGS--TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS  284 (409)
T ss_dssp             EEEEEECCT--TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred             eEEeeeccc--hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence            3222 1111  0123378899999 55555533478999999987653322    1111 11 13 9999994 5 4555


Q ss_pred             eCCCCcEEEEEcCCCceeEEeeecc---------------cceEEEEEEecCCCcEEEEec-CCCeEEEEEcCCCceeEE
Q psy7482         202 GNEESAITAYNLTDGSHLWQIKASA---------------SRIKGLVFFSIPQETTVCTGN-EESAITAYNLTDGSHLWH  265 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~~~~~---------------~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~~~~~~~~~  265 (327)
                      ...++.|+.|+....  +..+.++.               .....+++  +++|+++++-. .++.|+.|++.+++. ..
T Consensus       285 d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~--d~dG~lyvad~~~~~~I~~~~~~~G~v-~~  359 (409)
T 3hrp_A          285 DQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTV--DEDGNFYIVDGFKGYCLRKLDILDGYV-ST  359 (409)
T ss_dssp             ETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEE--CTTCCEEEEETTTTCEEEEEETTTTEE-EE
T ss_pred             eCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEE--eCCCCEEEEeCCCCCEEEEEECCCCEE-EE
Confidence            667889999987543  33333332               34678888  48999888877 889999999877763 44


Q ss_pred             eecc---------------cCceEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482         266 IKAS---------------ASRIKGLASHR--NHLICITSAGDLVVWEL  297 (327)
Q Consensus       266 ~~~~---------------~~~v~~~~~~~--~~l~~~~~dg~v~iw~~  297 (327)
                      +.++               -.....+++++  .++++-..++.|+.+++
T Consensus       360 ~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          360 VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            4433               23578888888  55555556667777665

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.65  E-value=1.3e-13  Score=112.71  Aligned_cols=273  Identities=10%  Similarity=-0.032  Sum_probs=181.8

Q ss_pred             EEEEecCCC----eEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCCCeEEEe
Q psy7482          26 LAASSGADE----TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        26 ~l~~~~~dg----~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~   91 (327)
                      .+++...++    .|.+.|..+++.+.++.....+  .+.++||+++++++.          .++.|.+||..+++.+..
T Consensus        34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~  111 (368)
T 1mda_H           34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD  111 (368)
T ss_dssp             EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred             EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence            444444444    8889999999999988765566  799999999998886          367899999999999999


Q ss_pred             EEeccc-----CCceeeEEEecCCCEEEEEeC--CCCEEE--EEcCCCceeeeeeccccCccccceEEEEEccCCc--EE
Q psy7482          92 FKKAHK-----GTAVNHISIHPSGKLALSVGK--DKTLRT--WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL--LY  160 (327)
Q Consensus        92 ~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l  160 (327)
                      +..+..     ......+.++|||++++++..  +..+.+  +|+.+   ...+.....         ....|+++  ++
T Consensus       112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~---------~~~~p~g~~~~~  179 (368)
T 1mda_H          112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC---------FHIHPGAAATHY  179 (368)
T ss_dssp             EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC---------CCCEEEETTEEE
T ss_pred             EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc---------eEEccCCCeEEE
Confidence            843311     112678999999999998875  356888  99876   333333211         11234442  33


Q ss_pred             EeecCCeEEEEEecC-----Cceee----Eec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc--eeEEeeec--
Q psy7482         161 AIPIQNKAVVFSVEK-----AGVLQ----TLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS--HLWQIKAS--  225 (327)
Q Consensus       161 ~~~~~~~i~i~d~~~-----~~~~~----~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~--  225 (327)
                      +.+.|+.+.+.|+.+     ++...    .+. ...+.   . .++ +.++..+. +.+.+.|+....  .+..+...  
T Consensus       180 ~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~  254 (368)
T 1mda_H          180 LGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNES  254 (368)
T ss_dssp             CCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCT
T ss_pred             EEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccc
Confidence            333478888888876     43321    111 22333   3 454 55555555 999999986542  22222110  


Q ss_pred             --------ccceEEEEEEecCCCcEEEEecC---------CCeEEEEEcCCCceeEEeecccCceEEEeeeC--c-EEEE
Q psy7482         226 --------ASRIKGLVFFSIPQETTVCTGNE---------ESAITAYNLTDGSHLWHIKASASRIKGLASHR--N-HLIC  285 (327)
Q Consensus       226 --------~~~v~~~~~~~s~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~  285 (327)
                              ......+++.  ++++.++.+..         ++.+.++|+.+.+.+..+.... ....++|+|  + ++++
T Consensus       255 ~~~~~~~~p~g~~~v~~s--~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va  331 (368)
T 1mda_H          255 GRKADNFRSAGFQMVAKL--KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYA  331 (368)
T ss_dssp             HHHHTTEEECSSSCEEEE--TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEE
T ss_pred             cccccccccCcceeeEEc--CCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEE
Confidence                    0111225674  88888776532         2356699999999988887554 678999998  4 5666


Q ss_pred             Ee-cCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         286 IT-SAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       286 ~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      .. .++.|.++|+.+.     +.+.....+.....+++.+.
T Consensus       332 ~~~~~~~VsVID~~t~-----kvv~~I~vg~~P~~i~~~~~  367 (368)
T 1mda_H          332 NSAGTEVLDIYDAASD-----QDQSSVELDKGPESLSVQNE  367 (368)
T ss_dssp             EETTTTEEEEEESSSC-----EEEEECCCCSCCCEEECCCC
T ss_pred             ccCCCCeEEEEECCCC-----cEEEEEECCCCCCEEEeecC
Confidence            66 5999999999988     55555566666777777664

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.64  E-value=1.7e-12  Score=108.57  Aligned_cols=236  Identities=11%  Similarity=0.090  Sum_probs=158.2

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCC--cEEEEEcCCCeEEE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSWQLEK   90 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~   90 (327)
                      .....|++  +++++++...++.|++||..+++......... ... ++|+|+++.|+++..++  .|.+++...+....
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~  208 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT  208 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence            46778888  67777777778999999998776654444322 233 99999999998888766  78888887654332


Q ss_pred             eEE--ec-ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccC-ccccceEEEEEccC-CcEEEeec-
Q psy7482          91 LFK--KA-HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYG-VGFENLDSVVWSPE-GLLYAIPI-  164 (327)
Q Consensus        91 ~~~--~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~-  164 (327)
                      .+.  .. .... +.+++++|++..|+.+..++.|+.||..++............ ....+...++|+|+ +.++++.. 
T Consensus       209 ~~g~~~~~~~~~-p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~  287 (409)
T 3hrp_A          209 RIGQLGSTFSGK-IGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN  287 (409)
T ss_dssp             EEEECCTTSCSC-CCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred             EeeeccchhcCC-cEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence            220  12 2333 789999995556666777889999999877543221111111 11111238999995 55555554 


Q ss_pred             CCeEEEEEecCCceeeEecC---------------CCceeEEEeecC-ceEEEeC-CCCcEEEEEcCCCceeEEeeec--
Q psy7482         165 QNKAVVFSVEKAGVLQTLKS---------------ESKVHSVCFLNE-TTVCTGN-EESAITAYNLTDGSHLWQIKAS--  225 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~~---------------~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~--  225 (327)
                      ++.|+.|+.... .......               -.....++++|+ .++++-. .++.|+.|++.++. +.++.++  
T Consensus       288 ~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~  365 (409)
T 3hrp_A          288 LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVD  365 (409)
T ss_dssp             TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTT
T ss_pred             CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCC
Confidence            789999987543 2222222               134789999999 5566666 78999999987775 4444443  


Q ss_pred             -------------ccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         226 -------------ASRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       226 -------------~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                                   -.....+++.  +++.++++-..++.|+.+++
T Consensus       366 ~~g~~~g~~~~~~~~~P~giavd--~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          366 VASQIDGTPLEATFNYPYDICYD--GEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             CBSCCCBSTTTCCBSSEEEEEEC--SSSEEEEEESTTCEEEEEEE
T ss_pred             CCCcCCCChhceEeCCceEEEEc--CCCCEEEEECCCCeEEEEEe
Confidence                         2357788884  78888888888888888765

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.64  E-value=2.7e-12  Score=104.26  Aligned_cols=219  Identities=15%  Similarity=0.127  Sum_probs=147.4

Q ss_pred             EEEEEECCCC-CeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeee
Q psy7482          57 ITCLKFTPEG-SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI  135 (327)
Q Consensus        57 v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  135 (327)
                      .....|+|++ .++++...++.|..||..+++.. .+ . .... +.++.++++++++++. .+ .|.+||..+++....
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~-~~~~-v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~  124 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VH-A-LPFM-GSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLH  124 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EE-E-CSSC-EEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEE
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EE-E-CCCc-ceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEE
Confidence            4567899974 45667777889999999887653 23 1 2334 9999999999876654 44 499999988775433


Q ss_pred             eeccccCccccceEEEEEccCCcEEEeecC-------CeEEEEEecCCceeeEecCCCceeEEEeecC-ceE-EEeCCCC
Q psy7482         136 TNLSSYGVGFENLDSVVWSPEGLLYAIPIQ-------NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTV-CTGNEES  206 (327)
Q Consensus       136 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~d~  206 (327)
                      ..... ......+..+.++|+|+++++..+       +.|..++  +++.............++|+|+ +.+ ++.+.++
T Consensus       125 ~~~~~-~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~  201 (326)
T 2ghs_A          125 AELES-DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVN  201 (326)
T ss_dssp             ECSST-TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTC
T ss_pred             eeCCC-CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCC
Confidence            22211 111234889999999997776532       4566666  4544333333345778999998 444 4556678


Q ss_pred             cEEEEEcC--CC-ce-----eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482         207 AITAYNLT--DG-SH-----LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       207 ~i~i~d~~--~~-~~-----~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      .|.+||+.  ++ +.     ...+.........+++  +++|.+.++...++.|.+||. +++.+..+..+...+++++|
T Consensus       202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~--d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af  278 (326)
T 2ghs_A          202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVC--DAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAF  278 (326)
T ss_dssp             EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEE--CTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEE
T ss_pred             EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEE--CCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEE
Confidence            99999986  55 32     2222223345667777  488887777666789999998 67777778777778999999


Q ss_pred             e-C--cEEEEEe
Q psy7482         279 H-R--NHLICIT  287 (327)
Q Consensus       279 ~-~--~~l~~~~  287 (327)
                      . +  +.|+.++
T Consensus       279 ~g~d~~~L~vt~  290 (326)
T 2ghs_A          279 IGPDASRLLVTS  290 (326)
T ss_dssp             ESTTSCEEEEEE
T ss_pred             ecCCCCEEEEEe
Confidence            8 5  4454444

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.63  E-value=2.4e-12  Score=103.23  Aligned_cols=223  Identities=10%  Similarity=0.123  Sum_probs=148.7

Q ss_pred             CCccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          13 HTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        13 h~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      +..---+..|   ++.++++...++.|..||..+++.. .+ .....+.+++++|+|+++++ . ++.|.+||.++++..
T Consensus        11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~   86 (297)
T 3g4e_A           11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV   86 (297)
T ss_dssp             CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred             CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence            3444556777   4567777778899999999876542 23 24567999999999995554 4 567999999887764


Q ss_pred             EeEEecc---cCCceeeEEEecCCCEEEEEeCC---------CCEEEEEcCC-CceeeeeeccccCccccceEEEEEccC
Q psy7482          90 KLFKKAH---KGTAVNHISIHPSGKLALSVGKD---------KTLRTWNLVK-GRSAYITNLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        90 ~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~  156 (327)
                      ... ...   ....++.++++|+|+++++...+         ..-.+|.+.. ++........      .....++|+|+
T Consensus        87 ~~~-~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~------~~pngi~~spd  159 (297)
T 3g4e_A           87 VLA-TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV------DISNGLDWSLD  159 (297)
T ss_dssp             EEE-ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE------SBEEEEEECTT
T ss_pred             EEE-ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc------ccccceEEcCC
Confidence            433 221   11237889999999966654321         2334555443 3322221111      22678999999


Q ss_pred             CcEEEee-c-CCeEEEEEe--cCCcee-----eEec-CCCceeEEEeecCceEE-EeCCCCcEEEEEcCCCceeEEeeec
Q psy7482         157 GLLYAIP-I-QNKAVVFSV--EKAGVL-----QTLK-SESKVHSVCFLNETTVC-TGNEESAITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       157 ~~~l~~~-~-~~~i~i~d~--~~~~~~-----~~~~-~~~~i~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~  225 (327)
                      ++.+..+ + ++.|..||+  .++...     ..+. ....+..+++++++.+. +....+.|..||..+++.+..+..+
T Consensus       160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p  239 (297)
T 3g4e_A          160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP  239 (297)
T ss_dssp             SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred             CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence            9866554 4 789999997  445431     1222 34568899999985544 4456778999999989998888877


Q ss_pred             ccceEEEEEEecCCCcEEEEec
Q psy7482         226 ASRIKGLVFFSIPQETTVCTGN  247 (327)
Q Consensus       226 ~~~v~~~~~~~s~~~~~l~~~~  247 (327)
                      ...+++++|.. |+++.|+.++
T Consensus       240 ~~~~t~~~f~g-~d~~~L~vt~  260 (297)
T 3g4e_A          240 VDKTTSCCFGG-KNYSEMYVTC  260 (297)
T ss_dssp             SSBEEEEEEES-GGGCEEEEEE
T ss_pred             CCCceEEEEeC-CCCCEEEEEc
Confidence            77899999952 6766655443

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.63  E-value=7.1e-14  Score=114.52  Aligned_cols=167  Identities=10%  Similarity=0.104  Sum_probs=124.2

Q ss_pred             cEEEEEe--CCCEEEEecCCCeEEEEEcccccc---------cc-ccccccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482          16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQ---------SG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus        16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~---------~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      +++.+++  ...++++|+.++ +++|++++.+.         .. ....+.. |+.++|  ++++|+++ .++.|++||+
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv  113 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL  113 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence            4777777  788888888775 66799775541         11 2223566 999999  89999998 8899999999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      .+....... ..+... +.++.+.+.  .+++++.||.|.+||+.++....   ..      ..|.+++|+|+| +.+..
T Consensus       114 ~sl~~~~~~-~~~~~~-v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~------~~Vs~v~WSpkG-~~vg~  179 (388)
T 1xip_A          114 EELSEFRTV-TSFEKP-VFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LA------QNVTSFDVTNSQ-LAVLL  179 (388)
T ss_dssp             SSTTCEEEE-EECSSC-EEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EE------ESEEEEEECSSE-EEEEE
T ss_pred             hhhhccCcc-ceeecc-eeeEEecCC--CEEEEECCCCEEEEEccCCcccc---cc------CCceEEEEcCCc-eEEEE
Confidence            876655544 555555 888777654  38889999999999999777542   22      239999999999 44444


Q ss_pred             cCCeEEEEEecCCce--eeEe------c----CCCceeEEEeecCc-eEEE
Q psy7482         164 IQNKAVVFSVEKAGV--LQTL------K----SESKVHSVCFLNET-TVCT  201 (327)
Q Consensus       164 ~~~~i~i~d~~~~~~--~~~~------~----~~~~i~~~~~~~~~-~l~~  201 (327)
                      .||.+++|+...++.  ...+      .    +...|.++.|.+++ ++++
T Consensus       180 ~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          180 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            599999999887775  5555      2    56789999999984 4443

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.63  E-value=2.9e-18  Score=141.77  Aligned_cols=259  Identities=10%  Similarity=0.041  Sum_probs=148.9

Q ss_pred             eCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCce
Q psy7482          22 ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV  101 (327)
Q Consensus        22 ~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v  101 (327)
                      .++..+++++.||.|+.||..+|+.+..+..  +.+.+..+..++..+++++.||.|+.||.++++.+..+ ..+....+
T Consensus         7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~-~~~~~~~~   83 (369)
T 2hz6_A            7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL-PFTIPELV   83 (369)
T ss_dssp             -CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEEC-SCCHHHHH
T ss_pred             eeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeee-eccCcccc
Confidence            3788999999999999999999999887775  45555555667878888899999999999988876655 22211101


Q ss_pred             ee-EEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCcee
Q psy7482         102 NH-ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVL  179 (327)
Q Consensus       102 ~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~  179 (327)
                      .+ ..+. .+..+++++.++.++.||.++|+....+....         ...++|++..+++++ ++.++.||.++++.+
T Consensus        84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---------~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~  153 (369)
T 2hz6_A           84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---------ADSLSPSTSLLYLGRTEYTITMYDTKTRELR  153 (369)
T ss_dssp             TTCSCC------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred             ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---------cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence            11 1111 34567788889999999999998876654332         123456666666665 899999999999887


Q ss_pred             eEecCCCceeEEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE----EEecCCCe
Q psy7482         180 QTLKSESKVHSVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV----CTGNEESA  251 (327)
Q Consensus       180 ~~~~~~~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l----~~~~~d~~  251 (327)
                      ..+.... .....+.++    +.+++++.+|.++.||.++++.+.++.. ..++..+-.. ++++...    ..+  ++.
T Consensus       154 W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~-~~dg~~~v~~~~~~--~~~  228 (369)
T 2hz6_A          154 WNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVW-QREGLRKVMHINVA--VET  228 (369)
T ss_dssp             CEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEEC-TTSSCEEECCEEEE--HHH
T ss_pred             EeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEe-cCCceEeccceeec--ccc
Confidence            7665211 122233332    5688889999999999999999888763 3344432221 2444321    112  345


Q ss_pred             EEEEEcCCCc----eeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccC
Q psy7482         252 ITAYNLTDGS----HLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNE  299 (327)
Q Consensus       252 i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~  299 (327)
                      ++.+|..+|+    .++.+.... .+.+.......|+.++.||.++.++...
T Consensus       229 l~~ld~~tG~~~~~~~W~~~~~~-~~~sp~~~~g~lyv~~~~G~l~al~~~~  279 (369)
T 2hz6_A          229 LRYLTFMSGEVGRITKWKYPFPK-ETEAKSKLTPTLYVGKYSTSLYASPSMV  279 (369)
T ss_dssp             HHHHHHHHHHHHHHHTSCCCCCC-HHHHHHHSEEEECBEECSSCEECCEEEE
T ss_pred             eeeeehhcCCcccceeeeeccCc-cccccccccceEEEecccCCEEecCccc
Confidence            6677776776    555554322 2211111117888899999999988863

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.63  E-value=6.1e-13  Score=118.50  Aligned_cols=264  Identities=11%  Similarity=0.117  Sum_probs=173.3

Q ss_pred             EeCCCEEEEecCCCeEEEEEccccccccccccc--cccEEEEEECC---CCCeEEEec------CCCcEEEEEcCCCeEE
Q psy7482          21 AATSKLAASSGADETVVLYDMVKRKQSGALMQH--EGTITCLKFTP---EGSHLISCS------DDGSIAIFRVGSWQLE   89 (327)
Q Consensus        21 ~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~--~~~v~~~~~~~---~~~~l~~~~------~d~~i~iw~~~~~~~~   89 (327)
                      +..+..++.++.|+.|..+|..+|+.+..+...  ......+..+|   ++ .+++++      .++.|..||.++|+.+
T Consensus       118 ~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~  196 (689)
T 1yiq_A          118 AVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEA  196 (689)
T ss_dssp             EEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred             EEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEE
Confidence            345667888889999999999999988665532  11111111122   44 444443      3689999999999988


Q ss_pred             EeEEeccc-----------------------------CCceeeEEEecCCCEEEEEeCCCC-------------------
Q psy7482          90 KLFKKAHK-----------------------------GTAVNHISIHPSGKLALSVGKDKT-------------------  121 (327)
Q Consensus        90 ~~~~~~~~-----------------------------~~~v~~~~~~~~~~~l~~~~~dg~-------------------  121 (327)
                      ..+.....                             ......++++|++.+++.+..++.                   
T Consensus       197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~  276 (689)
T 1yiq_A          197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS  276 (689)
T ss_dssp             EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred             EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence            77732110                             010125788888888998887763                   


Q ss_pred             EEEEEcCCCceeeeeeccccCc----cccceEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEecCCC-------
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGV----GFENLDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSES-------  186 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~~-------  186 (327)
                      |..+|.++|+.+..+....+..    ...+........+|+   .++.++ +|.++++|.++++.+...+...       
T Consensus       277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~  356 (689)
T 1yiq_A          277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM  356 (689)
T ss_dssp             EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred             EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence            9999999999988776543210    011122222233554   566666 8999999999999875433110       


Q ss_pred             ---------------------------------ceeEEEeecC-ceEEEeCC----------------------------
Q psy7482         187 ---------------------------------KVHSVCFLNE-TTVCTGNE----------------------------  204 (327)
Q Consensus       187 ---------------------------------~i~~~~~~~~-~~l~~~~~----------------------------  204 (327)
                                                       .-..++++|+ +++++...                            
T Consensus       357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  436 (689)
T 1yiq_A          357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT  436 (689)
T ss_dssp             ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred             CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence                                             0112678887 66665421                            


Q ss_pred             -----------------CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482         205 -----------------ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       205 -----------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  267 (327)
                                       +|.|..||+.+++.+.+++.+.. ...-.+.  ..+.+++.++.|+.++.||.++|+.+++++
T Consensus       437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~--tagglvf~gt~dg~l~a~D~~tG~~lw~~~  513 (689)
T 1yiq_A          437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI-FNGGTLS--TAGNLVFEGSADGRVIAYAADTGEKLWEQP  513 (689)
T ss_dssp             CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS-CCCCEEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC-ccCccce--ECCCEEEEECCCCcEEEEECCCCccceeee
Confidence                             37899999999999988876543 3332342  577888999999999999999999999998


Q ss_pred             cccCce-EEEeeeC---cEEEEEec
Q psy7482         268 ASASRI-KGLASHR---NHLICITS  288 (327)
Q Consensus       268 ~~~~~v-~~~~~~~---~~l~~~~~  288 (327)
                      ...+.+ .-+.|..   .++++.+.
T Consensus       514 ~~~~~~~~p~ty~~~G~qyv~~~~G  538 (689)
T 1yiq_A          514 AASGVMAAPVTYSVDGEQYVTFMAG  538 (689)
T ss_dssp             CSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred             CCCCcccCceEEEECCEEEEEEEec
Confidence            654322 3355533   56665543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.62  E-value=1.1e-12  Score=105.52  Aligned_cols=224  Identities=8%  Similarity=0.081  Sum_probs=152.2

Q ss_pred             CCccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          13 HTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        13 h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      +........|  +++ +++++..++.|..|+. +++ ...+..+...+..+++.++|+++++...++.|..|+.. ++..
T Consensus        43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~  119 (305)
T 3dr2_A           43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH  119 (305)
T ss_dssp             CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred             CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE
Confidence            4455667777  677 6778888899999997 444 34455566778999999999977766666889999986 5543


Q ss_pred             EeEE--ecccCCceeeEEEecCCCEEEE----EeC-------------CCCEEEEEcCCCceeeeeeccccCccccceEE
Q psy7482          90 KLFK--KAHKGTAVNHISIHPSGKLALS----VGK-------------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDS  150 (327)
Q Consensus        90 ~~~~--~~~~~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~  150 (327)
                      ....  .......+..+++.++|++.++    |..             .+.|..+|..+++.....  .     ......
T Consensus       120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~-----~~~p~g  192 (305)
T 3dr2_A          120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D-----LDHPNG  192 (305)
T ss_dssp             EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E-----ESSEEE
T ss_pred             EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c-----CCCCcc
Confidence            2221  1111122778999999998776    321             245777887666654332  1     122778


Q ss_pred             EEEccCCcEEEeec-C------CeEEEEEecCCcee--eEec--CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCcee
Q psy7482         151 VVWSPEGLLYAIPI-Q------NKAVVFSVEKAGVL--QTLK--SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHL  219 (327)
Q Consensus       151 ~~~~~~~~~l~~~~-~------~~i~i~d~~~~~~~--~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~  219 (327)
                      ++|+|+++.|.++. .      +.|.+|++..+...  ..+.  ....+..+++++++.+.++..+ .|.+|+. +++.+
T Consensus       193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv~~~~~-~g~~~  270 (305)
T 3dr2_A          193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GVCVFDS-DGQLL  270 (305)
T ss_dssp             EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS-EEEEECT-TSCEE
T ss_pred             eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC-cEEEECC-CCCEE
Confidence            99999998766654 3      68999998765411  1111  2345667889998777777755 4999997 57777


Q ss_pred             EEeeecccceEEEEEEecCCCcEEEEecCCCe
Q psy7482         220 WQIKASASRIKGLVFFSIPQETTVCTGNEESA  251 (327)
Q Consensus       220 ~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~  251 (327)
                      ..+..+. .+..++|.  ++++.|..++.++.
T Consensus       271 ~~~~~~~-~~~~~~f~--~d~~~L~it~~~~l  299 (305)
T 3dr2_A          271 GHIPTPG-TASNCTFD--QAQQRLFITGGPCL  299 (305)
T ss_dssp             EEEECSS-CCCEEEEC--TTSCEEEEEETTEE
T ss_pred             EEEECCC-ceeEEEEe--CCCCEEEEEcCCeE
Confidence            7776555 57888984  88888887776543

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.62  E-value=9.6e-13  Score=105.98  Aligned_cols=231  Identities=10%  Similarity=0.109  Sum_probs=151.9

Q ss_pred             ccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEE
Q psy7482          47 SGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW  125 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  125 (327)
                      +..+...........|+|+++ ++++...++.|..|+. +++. ..+ ...... +..++++++|+++++...++.|..|
T Consensus        37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~-~~~~~~-~~gl~~d~dG~l~v~~~~~~~v~~~  112 (305)
T 3dr2_A           37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVL-LDATAF-TNGNAVDAQQRLVHCEHGRRAITRS  112 (305)
T ss_dssp             CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEE-EESCSC-EEEEEECTTSCEEEEETTTTEEEEE
T ss_pred             eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEE-eCCCCc-cceeeECCCCCEEEEECCCCEEEEE
Confidence            333444455677899999998 6677778899999998 4543 344 334445 8999999999866665556789999


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEccCCcEEEe----ec--------------CCeEEEEEecCCceeeEecCCCc
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI----PI--------------QNKAVVFSVEKAGVLQTLKSESK  187 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~--------------~~~i~i~d~~~~~~~~~~~~~~~  187 (327)
                      +.. ++........ .......+..++++|+|+++++    +.              .+.|..+|..+++..... ....
T Consensus       113 ~~~-g~~~~~~~~~-~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~  189 (305)
T 3dr2_A          113 DAD-GQAHLLVGRY-AGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDH  189 (305)
T ss_dssp             CTT-SCEEEEECEE-TTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESS
T ss_pred             CCC-CCEEEEEecc-CCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCC
Confidence            976 5533222111 1111223778999999998885    32              256788887666654443 4456


Q ss_pred             eeEEEeecC-ceEEEeCCC------CcEEEEEcCCCceeEE---e-eecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482         188 VHSVCFLNE-TTVCTGNEE------SAITAYNLTDGSHLWQ---I-KASASRIKGLVFFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       188 i~~~~~~~~-~~l~~~~~d------~~i~i~d~~~~~~~~~---~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                      ...++|+|+ ..|+++...      +.|.+|++..+. +..   + .........+++  +++|++. +++.+ .|.+|+
T Consensus       190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~--d~~G~lw-v~~~~-gv~~~~  264 (305)
T 3dr2_A          190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCV--DRGGWLW-SSSGT-GVCVFD  264 (305)
T ss_dssp             EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEE--CTTSCEE-ECCSS-EEEEEC
T ss_pred             CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEE--CCCCCEE-EecCC-cEEEEC
Confidence            788999999 556665544      789999987554 211   1 112233456777  4888844 44444 599999


Q ss_pred             cCCCceeEEeecccCceEEEeeeC--cEEEEEecCCc
Q psy7482         257 LTDGSHLWHIKASASRIKGLASHR--NHLICITSAGD  291 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~  291 (327)
                      . +++.+..+..+. .+.+++|.+  +.|+.++.++.
T Consensus       265 ~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l  299 (305)
T 3dr2_A          265 S-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL  299 (305)
T ss_dssp             T-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred             C-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence            7 677777777655 588899987  56776666543

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.61  E-value=7.6e-13  Score=117.87  Aligned_cols=272  Identities=10%  Similarity=0.083  Sum_probs=178.1

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccccccc----------E-EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT----------I-TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .+..+++++.++.|..+|..+|+.+..+......          + ..++.  .+..+++++.|+.|..+|.++|+.+..
T Consensus        69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~  146 (689)
T 1yiq_A           69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS  146 (689)
T ss_dssp             ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence            4566777777899999999999988776532210          0 11122  356788899999999999999999887


Q ss_pred             EEec-ccCC--ceeeEEEecCCCEEEEEe------CCCCEEEEEcCCCceeeeeeccccC--------------------
Q psy7482          92 FKKA-HKGT--AVNHISIHPSGKLALSVG------KDKTLRTWNLVKGRSAYITNLSSYG--------------------  142 (327)
Q Consensus        92 ~~~~-~~~~--~v~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~--------------------  142 (327)
                      +... +...  .+.+.-.-.++ .++.+.      .+|.|..||.++|+.+..+......                    
T Consensus       147 ~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~  225 (689)
T 1yiq_A          147 VDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD  225 (689)
T ss_dssp             EECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred             ecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence            7432 2111  01111111144 444443      3689999999999988776532100                    


Q ss_pred             ------ccccceEEEEEccCCcEEEeec-CC-------------------eEEEEEecCCceeeEecC--C--------C
Q psy7482         143 ------VGFENLDSVVWSPEGLLYAIPI-QN-------------------KAVVFSVEKAGVLQTLKS--E--------S  186 (327)
Q Consensus       143 ------~~~~~v~~~~~~~~~~~l~~~~-~~-------------------~i~i~d~~~~~~~~~~~~--~--------~  186 (327)
                            .+......++++|++.++..+. ++                   .|..+|.++++.+..++.  .        .
T Consensus       226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~  305 (689)
T 1yiq_A          226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ  305 (689)
T ss_dssp             THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred             eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence                  0000113578888888887776 54                   499999999999988762  1        1


Q ss_pred             ceeEEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEeeeccc-c---------------------------------
Q psy7482         187 KVHSVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIKASAS-R---------------------------------  228 (327)
Q Consensus       187 ~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~---------------------------------  228 (327)
                      ++.......+    ..++.++.+|.++++|.++++.+...+.... .                                 
T Consensus       306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~  385 (689)
T 1yiq_A          306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF  385 (689)
T ss_dssp             CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred             CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence            1211222223    2688999999999999999998754321110 0                                 


Q ss_pred             -----eEEEEEEecCCCcEEEEecC---------------------------------------------CCeEEEEEcC
Q psy7482         229 -----IKGLVFFSIPQETTVCTGNE---------------------------------------------ESAITAYNLT  258 (327)
Q Consensus       229 -----v~~~~~~~s~~~~~l~~~~~---------------------------------------------d~~i~i~d~~  258 (327)
                           -..+++.  |+..++++...                                             +|.|..||+.
T Consensus       386 ~Gg~~w~~~a~d--p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~  463 (689)
T 1yiq_A          386 WGAHDWQPMSYN--PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV  463 (689)
T ss_dssp             TCSSCSSCCEEE--TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT
T ss_pred             ccccCCCcceEC--CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC
Confidence                 0124563  66666665421                                             4789999999


Q ss_pred             CCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         259 DGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       259 ~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +++.++++..+.. ...-.+..  .+++.++.||.|+.||..++
T Consensus       464 tG~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG  506 (689)
T 1yiq_A          464 KQQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTG  506 (689)
T ss_dssp             TTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             CCCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCC
Confidence            9999999876653 33223332  89999999999999999998

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.60  E-value=1.4e-11  Score=101.76  Aligned_cols=248  Identities=9%  Similarity=-0.063  Sum_probs=161.8

Q ss_pred             ECCCCCeEEEecC--CC---cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEe----------CCCCEEEEE
Q psy7482          62 FTPEGSHLISCSD--DG---SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG----------KDKTLRTWN  126 (327)
Q Consensus        62 ~~~~~~~l~~~~~--d~---~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iwd  126 (327)
                      ..|+++++++...  ..   .|.++|..+++.+..+..+  .. . .+.++||++.++.+.          .++.|.+||
T Consensus        28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g--~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD  103 (373)
T 2mad_H           28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG--FL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD  103 (373)
T ss_pred             CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC--CC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence            4467777776653  22   7899999999988877332  22 3 899999999999886          367899999


Q ss_pred             cCCCceeeeeeccc-c-CccccceEEEEEccCCcEEEeec---CCeEEEEEecCCceeeE-ecCCCceeEEEeecC--ce
Q psy7482         127 LVKGRSAYITNLSS-Y-GVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVLQT-LKSESKVHSVCFLNE--TT  198 (327)
Q Consensus       127 ~~~~~~~~~~~~~~-~-~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~~~-~~~~~~i~~~~~~~~--~~  198 (327)
                      ..+.+....+.... . .........+.|+|+|++++++.   ++.|.++| .+++.+.. +.....   +.+.|+  ..
T Consensus       104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~  179 (373)
T 2mad_H          104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPST  179 (373)
T ss_pred             CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCce
Confidence            99888777665541 1 00011256899999999888874   47899999 99998888 764443   334454  46


Q ss_pred             EEEeCCCCcEEEEEcCCCceeEEee-----ecccce-EEEEEEecCCCcEEEEecCCCeEEEEEcCCCc--eeEEeecc-
Q psy7482         199 VCTGNEESAITAYNLTDGSHLWQIK-----ASASRI-KGLVFFSIPQETTVCTGNEESAITAYNLTDGS--HLWHIKAS-  269 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v-~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~-  269 (327)
                      +++.+.||.+.++|. +++......     ....++ ....+.  +++..++..+.++.+.+.|+....  .+..+... 
T Consensus       180 ~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~  256 (373)
T 2mad_H          180 FYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA--NKSGRIVWPVYSGKILQADISAAGATNKAPIDALS  256 (373)
T ss_pred             EEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE--ecCCEEEEEcCCceEEEEeccCCcceEeeeeeecC
Confidence            677788999999999 777663322     111221 223343  444444444467899999987653  22222211 


Q ss_pred             ---------cCceEEEeeeC--cEEEEEec----------CCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         270 ---------ASRIKGLASHR--NHLICITS----------AGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       270 ---------~~~v~~~~~~~--~~l~~~~~----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                               ......+++++  +.++.+..          ++.|.++|..+.     +.+.....+....+++|+|+
T Consensus       257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~-----~vv~~i~~g~~p~~i~~s~D  328 (373)
T 2mad_H          257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG-----QTSSQISLGHDVDAISVAQD  328 (373)
T ss_pred             CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC-----EEEEEEECCCCcCeEEECCC
Confidence                     12233467777  55555432          357999998877     33333344556889999987

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.59  E-value=1.3e-13  Score=112.22  Aligned_cols=256  Identities=14%  Similarity=0.136  Sum_probs=175.0

Q ss_pred             EEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEeccc
Q psy7482          19 SVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHK   97 (327)
Q Consensus        19 ~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~   97 (327)
                      +... .+..+..++.++.|..|| .+++.......+...+.++...+++. |..++.+  |..+|. +++....+ ....
T Consensus        24 ~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~-~~~~   97 (330)
T 3hxj_A           24 SPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRF-DTKK   97 (330)
T ss_dssp             CCEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGS-CC--
T ss_pred             CceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEE-ECCC
Confidence            3444 456677788888999999 88887766665555667777777665 5555555  888885 55544433 1111


Q ss_pred             CCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCc
Q psy7482          98 GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG  177 (327)
Q Consensus        98 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~  177 (327)
                      .. .....+.  +..+..++.++.|..+|.. ++..........     .+.++...+++.+++...++.+..+|.. ++
T Consensus        98 ~~-~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~-----~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~  167 (330)
T 3hxj_A           98 AI-VSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKA-----IYATPIVSEDGTIYVGSNDNYLYAINPD-GT  167 (330)
T ss_dssp             ----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSC-----CCSCCEECTTSCEEEECTTSEEEEECTT-SC
T ss_pred             Cc-ccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCc-----eeeeeEEcCCCEEEEEcCCCEEEEECCC-CC
Confidence            11 3333343  4567788888999999988 776555543322     2556677778887766668999999998 77


Q ss_pred             eeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482         178 VLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       178 ~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                      ....+. ....+.++...+++.+.+++  +.+..+| .+++.+..+......+.++..  +++| .+..++.++.+..+|
T Consensus       168 ~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~--~~~g-~l~v~t~~~gl~~~~  241 (330)
T 3hxj_A          168 EKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAI--SEDG-TIYVTSLDGHLYAIN  241 (330)
T ss_dssp             EEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEE--CTTS-CEEEEETTTEEEEEC
T ss_pred             EeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEE--CCCC-eEEEEcCCCeEEEEC
Confidence            776666 44556677777777777777  8899999 778777777655566777777  2555 455566678888887


Q ss_pred             cCCCceeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482         257 LTDGSHLWHIKASASRIKGLASHR-NHLICITSAGDLVVWEL  297 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~  297 (327)
                       .+++.+..+......+..+...+ ..|..++.+|.|..+|.
T Consensus       242 -~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~  282 (330)
T 3hxj_A          242 -PDGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP  282 (330)
T ss_dssp             -TTSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred             -CCCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC
Confidence             46777777765554455566665 78888888988999985

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.59  E-value=3.2e-12  Score=113.63  Aligned_cols=276  Identities=11%  Similarity=0.086  Sum_probs=184.3

Q ss_pred             EEeCCCEEEEecCCCeEEEEEccccccccccccc-c----ccEEE-EEECCCCCeEEEecC------CCcEEEEEcCCCe
Q psy7482          20 VAATSKLAASSGADETVVLYDMVKRKQSGALMQH-E----GTITC-LKFTPEGSHLISCSD------DGSIAIFRVGSWQ   87 (327)
Q Consensus        20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~-~----~~v~~-~~~~~~~~~l~~~~~------d~~i~iw~~~~~~   87 (327)
                      +++++..|+.++.|+.|..+|..+|+.+..+..+ .    ..+.+ ...  .+..+++++.      ++.|+.+|..+|+
T Consensus       124 ~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~  201 (677)
T 1kb0_A          124 VALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGE  201 (677)
T ss_dssp             CEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred             ceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCc
Confidence            4446677888888999999999999988776643 1    11111 111  2345555553      6899999999999


Q ss_pred             EEEeEEecccC------------------------------CceeeEEEecCCCEEEEEeCCC-----------------
Q psy7482          88 LEKLFKKAHKG------------------------------TAVNHISIHPSGKLALSVGKDK-----------------  120 (327)
Q Consensus        88 ~~~~~~~~~~~------------------------------~~v~~~~~~~~~~~l~~~~~dg-----------------  120 (327)
                      .+..+......                              .....+++++++..++.+..++                 
T Consensus       202 ~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~  281 (677)
T 1kb0_A          202 RKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLY  281 (677)
T ss_dssp             EEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred             EEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCee
Confidence            98777322111                              0013578889888888887664                 


Q ss_pred             --CEEEEEcCCCceeeeeeccccCc----cccceEEEEEccCC---cEEEeec-CCeEEEEEecCCceeeEecCC--C--
Q psy7482         121 --TLRTWNLVKGRSAYITNLSSYGV----GFENLDSVVWSPEG---LLYAIPI-QNKAVVFSVEKAGVLQTLKSE--S--  186 (327)
Q Consensus       121 --~i~iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~---~~l~~~~-~~~i~i~d~~~~~~~~~~~~~--~--  186 (327)
                        .|..+|.++|+....+....+..    .......+....+|   ..++.++ +|.++++|.++++.+..+...  .  
T Consensus       282 ~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~  361 (677)
T 1kb0_A          282 LASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWA  361 (677)
T ss_dssp             TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSE
T ss_pred             eEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcc
Confidence              49999999999988776543210    01112233344467   5666666 999999999999988766521  0  


Q ss_pred             --------ce------------------------eEEEeecC-ceEEEeCC-----------------------------
Q psy7482         187 --------KV------------------------HSVCFLNE-TTVCTGNE-----------------------------  204 (327)
Q Consensus       187 --------~i------------------------~~~~~~~~-~~l~~~~~-----------------------------  204 (327)
                              ++                        ..++++|+ +++++...                             
T Consensus       362 ~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  441 (677)
T 1kb0_A          362 SGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWN  441 (677)
T ss_dssp             EEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCC
T ss_pred             cccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccc
Confidence                    01                        14678887 67666432                             


Q ss_pred             --------------CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         205 --------------ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       205 --------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                                    .|.|..||+.+++.+.+++.. .+.....+.  ..+..++.++.||.+++||.++++.++.+....
T Consensus       442 ~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~--~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~  518 (677)
T 1kb0_A          442 TAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLT--TAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT  518 (677)
T ss_dssp             CCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             cccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceE--eCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence                          278999999999998887643 334444443  567788889999999999999999999988544


Q ss_pred             C-ceEEEeeeC---cEEEEEec----------------CCcEEEEEccCc
Q psy7482         271 S-RIKGLASHR---NHLICITS----------------AGDLVVWELNED  300 (327)
Q Consensus       271 ~-~v~~~~~~~---~~l~~~~~----------------dg~v~iw~~~~~  300 (327)
                      + ...-+.|..   .+++..+.                .+.+..|.+...
T Consensus       519 ~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~~  568 (677)
T 1kb0_A          519 GVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGGK  568 (677)
T ss_dssp             CCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCB
T ss_pred             CcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEecccc
Confidence            2 222344433   45554333                367888888743

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.59  E-value=2.3e-12  Score=115.37  Aligned_cols=238  Identities=13%  Similarity=0.087  Sum_probs=150.3

Q ss_pred             ccccEEEEEECCCCCeEEE-----ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCC------
Q psy7482          53 HEGTITCLKFTPEGSHLIS-----CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT------  121 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~-----~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~------  121 (327)
                      |...+..++|||||++||.     |+....|++||+.+++.+........   ...++|+ |++.|+.+..+..      
T Consensus       127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k---~~~~~Ws-Dg~~l~y~~~~~~~~~~~~  202 (693)
T 3iuj_A          127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVK---FSGISWL-GNEGFFYSSYDKPDGSELS  202 (693)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEE---SCCCEEE-TTTEEEEEESSCCC-----
T ss_pred             CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCce---eccEEEe-CCCEEEEEEecCccccccc
Confidence            5567889999999999884     33346799999999986543211111   3567899 9999998887743      


Q ss_pred             -------EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-----CCeEEEEEecCCc-eeeEec-CCCc
Q psy7482         122 -------LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKAG-VLQTLK-SESK  187 (327)
Q Consensus       122 -------i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~~-~~~~~~-~~~~  187 (327)
                             |++|++.++.............+......+.|+|||++++...     .+.++++|+.++. ....+. +...
T Consensus       203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~  282 (693)
T 3iuj_A          203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA  282 (693)
T ss_dssp             --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS
T ss_pred             ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc
Confidence                   9999988765422221211100122367899999999876542     2589999998763 333443 4444


Q ss_pred             eeEEEeecC-ce-EEEeCC---CCcEEEEEcCCCce--eEEeeecccceEEEEEEecCCCcEEEEecC-CC--eEEEEEc
Q psy7482         188 VHSVCFLNE-TT-VCTGNE---ESAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQETTVCTGNE-ES--AITAYNL  257 (327)
Q Consensus       188 i~~~~~~~~-~~-l~~~~~---d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~-d~--~i~i~d~  257 (327)
                      .... ++++ +. ++....   .+.|..+|+.++..  ...+..|...+.  .|.  ++++.|+.... ++  .|++|++
T Consensus       283 ~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s--~~g~~lv~~~~~~g~~~l~~~d~  357 (693)
T 3iuj_A          283 DVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVH--SGSGYLFAEYMVDATARVEQFDY  357 (693)
T ss_dssp             CEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEE--EETTEEEEEEEETTEEEEEEECT
T ss_pred             eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEE--EECCEEEEEEEECCeeEEEEEEC
Confidence            4444 4444 44 444443   36799999987654  345555655554  564  67777766554 43  6899998


Q ss_pred             CCCceeEEee-cccCceEEEeeeC--cEEEEEecC----CcEEEEEccCc
Q psy7482         258 TDGSHLWHIK-ASASRIKGLASHR--NHLICITSA----GDLVVWELNED  300 (327)
Q Consensus       258 ~~~~~~~~~~-~~~~~v~~~~~~~--~~l~~~~~d----g~v~iw~~~~~  300 (327)
                      ..+ ....+. ...+.+..+.+++  ..++....+    +.+..||+.++
T Consensus       358 ~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g  406 (693)
T 3iuj_A          358 EGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG  406 (693)
T ss_dssp             TSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred             CCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence            754 344443 2345677777776  444433333    67888888765

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.58  E-value=3.2e-13  Score=110.64  Aligned_cols=169  Identities=15%  Similarity=0.142  Sum_probs=129.3

Q ss_pred             ceEEEEEccCCcEEEeecCCeEEEEEecCCc-----------eeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCC
Q psy7482         147 NLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG-----------VLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       147 ~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~-----------~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~  215 (327)
                      ++..+++++...++++|+...+.+|++....           ......... |+.++| .+..|+++ .++.|++||+++
T Consensus        39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~s  115 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF-HGDQVLVS-TRNALYSLDLEE  115 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE-ETTEEEEE-ESSEEEEEESSS
T ss_pred             cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE-CCCEEEEE-cCCcEEEEEchh
Confidence            4889999999999999987788889876443           223344566 999999 44788888 889999999988


Q ss_pred             CceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCCcEEEE
Q psy7482         216 GSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVW  295 (327)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw  295 (327)
                      .........|..++.++.+.+ |   .+++++.||.|.+||+.++....    +...|++++|+|+-++.|..||++++|
T Consensus       116 l~~~~~~~~~~~~v~~i~~~~-p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~  187 (388)
T 1xip_A          116 LSEFRTVTSFEKPVFQLKNVN-N---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSF  187 (388)
T ss_dssp             TTCEEEEEECSSCEEEEEECS-S---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEE
T ss_pred             hhccCccceeecceeeEEecC-C---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEE
Confidence            776667777888888887742 2   28888999999999999887643    445899999999558899999999999


Q ss_pred             EccCccCCCceeeee----c---CCCCceEEEEeCCCC
Q psy7482         296 ELNEDVTREPQRVSA----T---NDGCRFTCLAIRPPV  326 (327)
Q Consensus       296 ~~~~~~~~~~~~~~~----~---~~~~~i~~l~~~p~~  326 (327)
                      +...........+..    .   .+...|.++.|.+++
T Consensus       188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~  225 (388)
T 1xip_A          188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ  225 (388)
T ss_dssp             EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred             cCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence            887762100112211    1   256889999999875

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.57  E-value=1.4e-12  Score=115.99  Aligned_cols=272  Identities=10%  Similarity=0.017  Sum_probs=181.6

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccccccc-----------EEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT-----------ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .+..++.++.++.|.-+|..+|+.+..+......           ...+++  ++..+++++.|+.|..+|..+|+.+..
T Consensus        76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~  153 (677)
T 1kb0_A           76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWH  153 (677)
T ss_dssp             ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEee
Confidence            4556666777899999999999888766532110           112222  366788889999999999999999888


Q ss_pred             EEecccC---CceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCc-------------------
Q psy7482          92 FKKAHKG---TAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGV-------------------  143 (327)
Q Consensus        92 ~~~~~~~---~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~-------------------  143 (327)
                      +......   ..+...-.. .+..++.++.      +|.|+.+|.++|+.+..........                   
T Consensus       154 ~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~  232 (677)
T 1kb0_A          154 QNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS  232 (677)
T ss_dssp             EETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred             ecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence            7332010   112211111 2345555543      6899999999999987776533210                   


Q ss_pred             --------cccceEEEEEccCCcEEEeec-CC-------------------eEEEEEecCCceeeEecC--C--------
Q psy7482         144 --------GFENLDSVVWSPEGLLYAIPI-QN-------------------KAVVFSVEKAGVLQTLKS--E--------  185 (327)
Q Consensus       144 --------~~~~v~~~~~~~~~~~l~~~~-~~-------------------~i~i~d~~~~~~~~~~~~--~--------  185 (327)
                              +......++++|++.++..+. ++                   .|..+|.++++.+..++.  .        
T Consensus       233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~  312 (677)
T 1kb0_A          233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST  312 (677)
T ss_dssp             GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred             CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccC
Confidence                    001123578888888777765 32                   599999999999888762  1        


Q ss_pred             CceeEEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEeeeccc-----------ce---------------------
Q psy7482         186 SKVHSVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIKASAS-----------RI---------------------  229 (327)
Q Consensus       186 ~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----------~v---------------------  229 (327)
                      .....+....+    ..++.++.+|.++++|.++++.+..++....           ++                     
T Consensus       313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~  392 (677)
T 1kb0_A          313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA  392 (677)
T ss_dssp             SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred             CCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccc
Confidence            11222222223    4688999999999999999998876642210           11                     


Q ss_pred             ---EEEEEEecCCCcEEEEecC-------------------------------------------CCeEEEEEcCCCcee
Q psy7482         230 ---KGLVFFSIPQETTVCTGNE-------------------------------------------ESAITAYNLTDGSHL  263 (327)
Q Consensus       230 ---~~~~~~~s~~~~~l~~~~~-------------------------------------------d~~i~i~d~~~~~~~  263 (327)
                         ..+++.  |++.++++...                                           .+.|..||+.+++.+
T Consensus       393 ~~w~~~a~d--p~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~  470 (677)
T 1kb0_A          393 HNWHPMSFN--PQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA  470 (677)
T ss_dssp             SCSSCCEEE--TTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE
T ss_pred             cCCCCceEc--CCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE
Confidence               135663  77777766432                                           278999999999999


Q ss_pred             EEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         264 WHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       264 ~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +++.... ++.+..+..  .+++.++.||.+++||..++
T Consensus       471 W~~~~~~-~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG  508 (677)
T 1kb0_A          471 WSVEHVS-PWNGGTLTTAGNVVFQGTADGRLVAYHAATG  508 (677)
T ss_dssp             EEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             eecCCCC-CCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence            8887433 344433443  78888999999999999988

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.56  E-value=1e-11  Score=100.84  Aligned_cols=216  Identities=13%  Similarity=0.142  Sum_probs=141.9

Q ss_pred             EEEEEe--C-CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482          17 VRSVAA--T-SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        17 v~~~~~--~-~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      ..+.+|  + +.++++...++.|..||..+++.. .+. ....+.+++|+|+|+++++. .+ .|.+||..+++......
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~  126 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE  126 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence            345666  3 456677777899999998876543 222 34679999999999877754 44 49999998877543321


Q ss_pred             ec--ccCCceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c
Q psy7482          94 KA--HKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I  164 (327)
Q Consensus        94 ~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~  164 (327)
                      ..  .....+..+.++|+|+++++...      .+.|..++  +++.......      ......++|+|+++.+..+ .
T Consensus       127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~------~~~~~~i~~s~dg~~lyv~~~  198 (326)
T 2ghs_A          127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD------ISIPNSICFSPDGTTGYFVDT  198 (326)
T ss_dssp             SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE------ESSEEEEEECTTSCEEEEEET
T ss_pred             CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC------CcccCCeEEcCCCCEEEEEEC
Confidence            11  11123889999999987665432      24455555  4443222111      1126789999999866555 3


Q ss_pred             -CCeEEEEEec--CC-ce-----eeEec-CCCceeEEEeecCceEEEe-CCCCcEEEEEcCCCceeEEeeecccceEEEE
Q psy7482         165 -QNKAVVFSVE--KA-GV-----LQTLK-SESKVHSVCFLNETTVCTG-NEESAITAYNLTDGSHLWQIKASASRIKGLV  233 (327)
Q Consensus       165 -~~~i~i~d~~--~~-~~-----~~~~~-~~~~i~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~  233 (327)
                       ++.|.+||+.  ++ +.     ...+. ....+..+++++++.+.++ ..++.|..||. +++.+..+..+...+.+++
T Consensus       199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~a  277 (326)
T 2ghs_A          199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPA  277 (326)
T ss_dssp             TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEE
T ss_pred             CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEE
Confidence             6899999986  55 32     22222 3456778999988555544 45678999998 5777777777777799999


Q ss_pred             EEecCCCcEEEEe
Q psy7482         234 FFSIPQETTVCTG  246 (327)
Q Consensus       234 ~~~s~~~~~l~~~  246 (327)
                      |.. ++++.|+++
T Consensus       278 f~g-~d~~~L~vt  289 (326)
T 2ghs_A          278 FIG-PDASRLLVT  289 (326)
T ss_dssp             EES-TTSCEEEEE
T ss_pred             Eec-CCCCEEEEE
Confidence            952 676665444

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.55  E-value=3.6e-12  Score=104.34  Aligned_cols=263  Identities=10%  Similarity=0.009  Sum_probs=160.5

Q ss_pred             ccEEEEEe--CCCEEEEec--CCCeEEEEEccccccc------cccccccccEEEEEECCCCCeEEEecC-----CCcEE
Q psy7482          15 ASVRSVAA--TSKLAASSG--ADETVVLYDMVKRKQS------GALMQHEGTITCLKFTPEGSHLISCSD-----DGSIA   79 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~--~dg~v~~w~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~   79 (327)
                      ..+..+++  +|+++++..  .++.++||.+.+++..      .....+-..+..+++.++++++++-..     ++.|.
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~   96 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV   96 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence            57888888  788888854  2343666666555432      111234567999999999876665433     57899


Q ss_pred             EEEcCCCeEEEeEEeccc----CCceeeEEEecCCCEE-EEEe---CCCCEEEEEcCCCceeeeeeccccCccccceEEE
Q psy7482          80 IFRVGSWQLEKLFKKAHK----GTAVNHISIHPSGKLA-LSVG---KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSV  151 (327)
Q Consensus        80 iw~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l-~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~  151 (327)
                      +||+.+++.+..+.....    ...+..+++++++..+ ++-.   .++.|.+||+.+++.......+... ...   ..
T Consensus        97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~-~~~---~~  172 (343)
T 2qe8_A           97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI-APE---DI  172 (343)
T ss_dssp             EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT-SCC---SC
T ss_pred             EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc-ccc---cc
Confidence            999999987777632211    1126889999865455 4444   5789999999887754433211010 000   02


Q ss_pred             EEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCC-cEEEEEcC---CCc-----eeE
Q psy7482         152 VWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEES-AITAYNLT---DGS-----HLW  220 (327)
Q Consensus       152 ~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~-~i~i~d~~---~~~-----~~~  220 (327)
                      .+.+++..+.... ++.+..|.             ..+..++++|+ +.|+.+...+ .+..++..   .+.     ...
T Consensus       173 ~~~~~g~~~~~~~~~g~~~~~~-------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  239 (343)
T 2qe8_A          173 DLVIDGVPVQIGQPDGTVIRPH-------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS  239 (343)
T ss_dssp             CCEETTEECBEECTTSCEECCC-------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred             ceeECCEEEEeccCCCceecee-------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence            3444665555443 56554432             24678999999 4666665544 55555532   111     000


Q ss_pred             --EeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec-ccCceEEEeeeC--cEEEEEecCCcEEEE
Q psy7482         221 --QIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA-SASRIKGLASHR--NHLICITSAGDLVVW  295 (327)
Q Consensus       221 --~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~--~~l~~~~~dg~v~iw  295 (327)
                        ...++......+++  +++|.++++...++.|.+||..+++....... +...+.+++|.+  .++++.+..+.+.+|
T Consensus       240 ~~~~~g~~g~pdgia~--d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f  317 (343)
T 2qe8_A          240 KIERYSEKPICDGISI--DKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL  317 (343)
T ss_dssp             TCEEEEECCSCSCEEE--CTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred             ceEecccCCCCceEEE--CCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence              11233445567888  48999999998899999999856664333322 234678999987  566666655555444


Q ss_pred             E
Q psy7482         296 E  296 (327)
Q Consensus       296 ~  296 (327)
                      .
T Consensus       318 ~  318 (343)
T 2qe8_A          318 N  318 (343)
T ss_dssp             B
T ss_pred             c
Confidence            4

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.52  E-value=1.7e-11  Score=101.89  Aligned_cols=238  Identities=11%  Similarity=0.149  Sum_probs=161.9

Q ss_pred             EEEe--CCCEEEEec----------CCCeEEEEEccccccccccccc-------cccEEEEEECCCCCeEEEecC--CCc
Q psy7482          19 SVAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQH-------EGTITCLKFTPEGSHLISCSD--DGS   77 (327)
Q Consensus        19 ~~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~   77 (327)
                      .+++  |+++++++.          .++.|.++|..+++.+..+.-.       ......++|+|||++|+++..  ++.
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~  201 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA  201 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence            5666  888887775          3678999999999888776421       123457899999999998764  578


Q ss_pred             EEEEEcCCCeEEEeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccc-eEEEEEcc
Q psy7482          78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFEN-LDSVVWSP  155 (327)
Q Consensus        78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~  155 (327)
                      |.+.|+.+++.+..+..+.    .  ....|+ ...+++.+.||.+.+.+..+++...... ........+ ...+.+.+
T Consensus       202 VsVID~~t~kvv~~I~v~g----~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~-~~~~v~~~p~~~~~~~~~  274 (426)
T 3c75_H          202 VGVVDLEGKTFDRMLDVPD----C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT-EVFHTEDELLINHPAFSL  274 (426)
T ss_dssp             EEEEETTTTEEEEEEECCS----E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC-CCCSCTTSCBCSCCEECT
T ss_pred             EEEEECCCCeEEEEEEcCC----c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee-eeeccCCCceeeEeeecC
Confidence            9999999999988883321    1  223343 3556667778888888885555432211 101000111 22456788


Q ss_pred             CCcEEEeec-CCeEEEEEecCCcee--eEec-----------CCCceeEEEeecC-ceEEEeC----------CCCcEEE
Q psy7482         156 EGLLYAIPI-QNKAVVFSVEKAGVL--QTLK-----------SESKVHSVCFLNE-TTVCTGN----------EESAITA  210 (327)
Q Consensus       156 ~~~~l~~~~-~~~i~i~d~~~~~~~--~~~~-----------~~~~i~~~~~~~~-~~l~~~~----------~d~~i~i  210 (327)
                      ++..++... .+.+.+.|.......  ..+.           .......++++|+ +++++..          .++.|.+
T Consensus       275 dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsV  354 (426)
T 3c75_H          275 RSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVV  354 (426)
T ss_dssp             TTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred             CCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEE
Confidence            877655544 789999998765421  1111           0112223688998 5555542          2457999


Q ss_pred             EEcCCCceeEEeeecccceEEEEEEecCCCc-EEEEec-CCCeEEEEEcCCCceeEEe
Q psy7482         211 YNLTDGSHLWQIKASASRIKGLVFFSIPQET-TVCTGN-EESAITAYNLTDGSHLWHI  266 (327)
Q Consensus       211 ~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~~~~-~d~~i~i~d~~~~~~~~~~  266 (327)
                      +|..+.+.+.++.... ....++|  +|+++ ++++.. .++.|.++|+.+++.+.++
T Consensus       355 ID~~T~kvv~~I~vg~-~P~gia~--spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          355 LNAETGERINKIELGH-EIDSINV--SQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             EETTTCCEEEEEEEEE-EECEEEE--CCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             EECCCCeEEEEEECCC-CcCeEEE--ccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            9999999999887543 4788899  48998 888877 5899999999999998887

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.52  E-value=1.1e-11  Score=111.00  Aligned_cols=237  Identities=9%  Similarity=0.124  Sum_probs=146.6

Q ss_pred             cCCccEEEEEe--CCCEEEE-----ecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCC--------
Q psy7482          12 SHTASVRSVAA--TSKLAAS-----SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG--------   76 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~-----~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------   76 (327)
                      +|...+..++|  ||++||-     |+....|++||+.+++.+... .+......++|+ |++.|+.++.+.        
T Consensus       126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~  203 (693)
T 3iuj_A          126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA  203 (693)
T ss_dssp             TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred             CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence            45667888888  8998883     333467999999998865431 111113578899 999998887774        


Q ss_pred             -----cEEEEEcCCCeE--EEeEE-ec-ccCCceeeEEEecCCCEEEEEeC----CCCEEEEEcCCCce-eeeeeccccC
Q psy7482          77 -----SIAIFRVGSWQL--EKLFK-KA-HKGTAVNHISIHPSGKLALSVGK----DKTLRTWNLVKGRS-AYITNLSSYG  142 (327)
Q Consensus        77 -----~i~iw~~~~~~~--~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~-~~~~~~~~~~  142 (327)
                           .|++|++.+++.  ...+. .. +... ...+.|+|||++|+....    +..|.++|+.++.. ...+..... 
T Consensus       204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~-~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-  281 (693)
T 3iuj_A          204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR-YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-  281 (693)
T ss_dssp             -CCCCEEEEEETTSCGGGCEEEESCSGGGCCS-EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS-
T ss_pred             cCCCcEEEEEECCCCcccceEEEecCCCCCeE-EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC-
Confidence                 399999977643  22221 12 2333 678899999998865443    24899999987642 222222211 


Q ss_pred             ccccceEEEEEccCCcEEE-eec----CCeEEEEEecCCce--eeE-ecCCCceeEEEeecC-ceEEEeC-CCC--cEEE
Q psy7482         143 VGFENLDSVVWSPEGLLYA-IPI----QNKAVVFSVEKAGV--LQT-LKSESKVHSVCFLNE-TTVCTGN-EES--AITA  210 (327)
Q Consensus       143 ~~~~~v~~~~~~~~~~~l~-~~~----~~~i~i~d~~~~~~--~~~-~~~~~~i~~~~~~~~-~~l~~~~-~d~--~i~i  210 (327)
                          ..... +++++..|+ .+.    .+.|..+|+.++..  ... ..+...+.  .|+++ +.|+... .++  .|++
T Consensus       282 ----~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~  354 (693)
T 3iuj_A          282 ----ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQ  354 (693)
T ss_dssp             ----SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred             ----ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence                13333 566665444 443    36899999987654  233 33444444  77776 5555544 444  6888


Q ss_pred             EEcCCCceeEEeee-cccceEEEEEEecCCCcEEEEecCC----CeEEEEEcCCCce
Q psy7482         211 YNLTDGSHLWQIKA-SASRIKGLVFFSIPQETTVCTGNEE----SAITAYNLTDGSH  262 (327)
Q Consensus       211 ~d~~~~~~~~~~~~-~~~~v~~~~~~~s~~~~~l~~~~~d----~~i~i~d~~~~~~  262 (327)
                      ||+..+ ....+.. ....+..+.+  +++++.++....+    +.++.||+.+++.
T Consensus       355 ~d~~g~-~~~~l~~p~~~~~~~~~~--~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~  408 (693)
T 3iuj_A          355 FDYEGK-RVREVALPGLGSVSGFNG--KHDDPALYFGFENYAQPPTLYRFEPKSGAI  408 (693)
T ss_dssp             ECTTSC-EEEEECCSSSSEEEECCC--CTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred             EECCCC-eeEEeecCCCceEEeeec--CCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence            998744 4444432 3344555555  3677766554333    7899999987763

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.49  E-value=3.6e-14  Score=117.22  Aligned_cols=190  Identities=16%  Similarity=0.134  Sum_probs=112.1

Q ss_pred             CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc
Q psy7482          65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG  144 (327)
Q Consensus        65 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  144 (327)
                      ++..+++++.||.|+.||..+|+....+ ..  +. +.+..+..++..+++++.||.|+.||.++++.+.........  
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~-~~--~~-~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~--   81 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTL-KE--DP-VLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE--   81 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEE-EC--CC-SCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH--
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEe-cC--CC-ceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc--
Confidence            5778999999999999999999999887 33  33 555556667777888889999999999988876554332110  


Q ss_pred             ccceE-EEEEccCCcEEEeec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEE
Q psy7482         145 FENLD-SVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQ  221 (327)
Q Consensus       145 ~~~v~-~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~  221 (327)
                        .+. +..+..++ .+++++ ++.++.||.++|+.+..+.....   ..++|+ +.+++++.++.|+.||.++++.+..
T Consensus        82 --~~~~sp~~~~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~  155 (369)
T 2hz6_A           82 --LVQASPCRSSDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWN  155 (369)
T ss_dssp             --HHTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred             --ccccCceEecCC-EEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence              010 01111233 455554 89999999999998887764332   234555 7888999999999999999998777


Q ss_pred             eeecccceEEEEEEecCCC---cEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         222 IKASASRIKGLVFFSIPQE---TTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       222 ~~~~~~~v~~~~~~~s~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      +..+.  ....++  +++.   ..+++++.||.++.||..+++.++......
T Consensus       156 ~~~~~--~~~~~~--~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~  203 (369)
T 2hz6_A          156 ATYFD--YAASLP--EDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYAS  203 (369)
T ss_dssp             EEEEE--ECCBCC--CCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSS
T ss_pred             Eeccc--ccCccc--cCCccccceEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence            65332  122222  1221   567778889999999999999998877443

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.48  E-value=5.5e-11  Score=92.07  Aligned_cols=202  Identities=10%  Similarity=0.069  Sum_probs=142.8

Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      +.+.++..+.... ...+.|++++.+.++.+.  ++.|.++|+.+++......+....    ....+++.  +..+....
T Consensus        10 ~vv~~~p~~~~~f-~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~----fgeGi~~~--g~~lyv~t   82 (266)
T 2iwa_A           10 EVLNEFPHDPYAF-TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY----FGEGLTLL--NEKLYQVV   82 (266)
T ss_dssp             EEEEEEECCTTCC-EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC----CEEEEEEE--TTEEEEEE
T ss_pred             eEEEEEECCCCCC-cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc----ceEEEEEe--CCEEEEEE
Confidence            4555552222223 688999998754444443  579999999999988877665431    12345554  44444443


Q ss_pred             --CCeEEEEEecCCceeeEecCC-CceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecc--c---ceEEEEEE
Q psy7482         165 --QNKAVVFSVEKAGVLQTLKSE-SKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASA--S---RIKGLVFF  235 (327)
Q Consensus       165 --~~~i~i~d~~~~~~~~~~~~~-~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~---~v~~~~~~  235 (327)
                        ++.+.++|..+.+.+.++... ..-  ..+++| +.++++..++.|.++|..+.+.+..+....  .   ....+.+ 
T Consensus        83 ~~~~~v~viD~~t~~v~~~i~~g~~~g--~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~-  159 (266)
T 2iwa_A           83 WLKNIGFIYDRRTLSNIKNFTHQMKDG--WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY-  159 (266)
T ss_dssp             TTCSEEEEEETTTTEEEEEEECCSSSC--CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-
T ss_pred             ecCCEEEEEECCCCcEEEEEECCCCCe--EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE-
Confidence              899999999999999988744 222  334455 555556678999999999988888776432  1   3567787 


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc-------------CceEEEeeeC---cEEEEEecCCcEEEEEccC
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA-------------SRIKGLASHR---NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~  299 (327)
                        .++...+....++.|.+.|..+++.+..+....             ...+.++|+|   .+++++...+.|.+.++..
T Consensus       160 --~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~  237 (266)
T 2iwa_A          160 --INGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL  237 (266)
T ss_dssp             --ETTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred             --ECCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence              367666666678899999999999888886421             3568999998   6777887889999988876


Q ss_pred             c
Q psy7482         300 D  300 (327)
Q Consensus       300 ~  300 (327)
                      .
T Consensus       238 ~  238 (266)
T 2iwa_A          238 V  238 (266)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.46  E-value=8.6e-11  Score=104.44  Aligned_cols=272  Identities=11%  Similarity=0.099  Sum_probs=174.7

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccccccc----------E-EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT----------I-TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .+..++.++.++.|.-+|..+|+.+..+......          + ..+++  .+..++.++.|+.|..+|..+|+.+..
T Consensus        65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~  142 (668)
T 1kv9_A           65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS  142 (668)
T ss_dssp             ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeee
Confidence            4556666777899999999999887666432110          0 11222  355788888999999999999999888


Q ss_pred             EEecccC--Cceee-EEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeecccc-Cc------------------
Q psy7482          92 FKKAHKG--TAVNH-ISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSY-GV------------------  143 (327)
Q Consensus        92 ~~~~~~~--~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~-~~------------------  143 (327)
                      +......  ..+.+ ..+. ++ .++.+..      +|.|..+|.++|+.+..+..... ..                  
T Consensus       143 ~~~~~~~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~  220 (668)
T 1kv9_A          143 QQTTDPAKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD  220 (668)
T ss_dssp             EECSCTTSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred             eccCCCCCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence            7432211  00111 1111 33 5555543      58999999999999887754211 00                  


Q ss_pred             -------cccceEEEEEccCCcEEEeec-CC-------------------eEEEEEecCCceeeEecCC----------C
Q psy7482         144 -------GFENLDSVVWSPEGLLYAIPI-QN-------------------KAVVFSVEKAGVLQTLKSE----------S  186 (327)
Q Consensus       144 -------~~~~v~~~~~~~~~~~l~~~~-~~-------------------~i~i~d~~~~~~~~~~~~~----------~  186 (327)
                             +......++++|+..++..+. ++                   .|..+|.++++.+..++..          .
T Consensus       221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~  300 (668)
T 1kv9_A          221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQ  300 (668)
T ss_dssp             CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred             ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCC
Confidence                   000112467888777777665 44                   4999999999998887621          2


Q ss_pred             ceeEEEeecCc----eEEEeCCCCcEEEEEcCCCceeEEeeeccc------------ce---------------------
Q psy7482         187 KVHSVCFLNET----TVCTGNEESAITAYNLTDGSHLWQIKASAS------------RI---------------------  229 (327)
Q Consensus       187 ~i~~~~~~~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------~v---------------------  229 (327)
                      +.....+..++    .++.++.+|.++++|..+++.+...+....            ++                     
T Consensus       301 ~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~  380 (668)
T 1kv9_A          301 QITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA  380 (668)
T ss_dssp             CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred             CcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccc
Confidence            22222222342    588999999999999999998754432110            00                     


Q ss_pred             ---EEEEEEecCCCcEEEE------------------------------------ecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         230 ---KGLVFFSIPQETTVCT------------------------------------GNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       230 ---~~~~~~~s~~~~~l~~------------------------------------~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                         ..+++.  |+...+..                                    ...+|.|..||+.+++.+++...+.
T Consensus       381 ~~w~~~a~d--p~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~  458 (668)
T 1kv9_A          381 HNWHSMSFN--PGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT  458 (668)
T ss_dssp             SCSSCCEEE--TTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS
T ss_pred             cCCCcceEC--CCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC
Confidence               013443  55444443                                    1134889999999999998887554


Q ss_pred             Cce-EEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         271 SRI-KGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       271 ~~v-~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ... ..+.....+++.++.||.|+.||..++
T Consensus       459 ~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG  489 (668)
T 1kv9_A          459 HWNGGTLSTAGNLVFQGTAAGQMHAYSADKG  489 (668)
T ss_dssp             SCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             CCcCceeEeCCCEEEEECCcccchhhhhhcC
Confidence            221 123333388999999999999999988

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.45  E-value=2e-11  Score=99.88  Aligned_cols=250  Identities=9%  Similarity=0.064  Sum_probs=153.2

Q ss_pred             ccEEEEEECCCCCeEEEec--CCCcEEEEEcCCCeEEEeEE------ecccCCceeeEEEecCCCEEEEEeC-----CCC
Q psy7482          55 GTITCLKFTPEGSHLISCS--DDGSIAIFRVGSWQLEKLFK------KAHKGTAVNHISIHPSGKLALSVGK-----DKT  121 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~  121 (327)
                      ..+..++++|+|+.+++..  .++.+.||.+.+++.. .+.      ..+... +..++++++++++++-..     ++.
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~-p~gv~~d~~g~L~v~D~g~~~~~~~~   94 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDT-VLGIKSDGNGIVWMLDNGNQSKSVPK   94 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSC-EEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeE-eeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence            5789999999999888853  2343556655555433 221      122344 899999999876555433     578


Q ss_pred             EEEEEcCCCceeeeeecccc-CccccceEEEEEccCC-cEEEee----cCCeEEEEEecCCceeeEecC-CCc-eeEEEe
Q psy7482         122 LRTWNLVKGRSAYITNLSSY-GVGFENLDSVVWSPEG-LLYAIP----IQNKAVVFSVEKAGVLQTLKS-ESK-VHSVCF  193 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~----~~~~i~i~d~~~~~~~~~~~~-~~~-i~~~~~  193 (327)
                      |.+||+.+++....+.+... ......+..++++|++ ..+++.    .++.|.+||..+++....+.. ... .....+
T Consensus        95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~  174 (343)
T 2qe8_A           95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL  174 (343)
T ss_dssp             EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred             EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence            99999998887666655322 1112346899999864 444443    367999999998887665542 111 001334


Q ss_pred             ecCc-eEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCC-eEEEEEcC---CCc-----ee
Q psy7482         194 LNET-TVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEES-AITAYNLT---DGS-----HL  263 (327)
Q Consensus       194 ~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~-~i~i~d~~---~~~-----~~  263 (327)
                      .+++ .+.+.+.++.+..|.              ..+..+++  +|+++.|+.+..++ .+..++..   .+.     ..
T Consensus       175 ~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~--s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~  238 (343)
T 2qe8_A          175 VIDGVPVQIGQPDGTVIRPH--------------LGVNGIVL--DAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELG  238 (343)
T ss_dssp             EETTEECBEECTTSCEECCC--------------CCEEEEEE--CTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHH
T ss_pred             eECCEEEEeccCCCceecee--------------cccceeEe--ccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhh
Confidence            4453 344556666665442              13567888  48998888776655 55555532   111     00


Q ss_pred             E--EeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         264 W--HIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       264 ~--~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      .  ...++......+++++  .++++...++.|.+|+...+   ....+........+++++|.|+
T Consensus       239 ~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G---~~~~~~~~~~~~~p~~va~~~~  301 (343)
T 2qe8_A          239 SKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR---AYKLLVTDEKLSWTDSFNFGSD  301 (343)
T ss_dssp             TTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT---EEEEEEECGGGSCEEEEEECTT
T ss_pred             cceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC---CEEEEEECCceecCCeeEECCC
Confidence            0  1123334566788988  77777778899999998444   2233322222345788888775

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.42  E-value=1.1e-10  Score=99.52  Aligned_cols=233  Identities=9%  Similarity=0.054  Sum_probs=167.0

Q ss_pred             EEEEe-----CCCEEEEec-CCCeEEEEEcccccccccccc-ccccEEEEEE-C-CCCCeEEEec---------------
Q psy7482          18 RSVAA-----TSKLAASSG-ADETVVLYDMVKRKQSGALMQ-HEGTITCLKF-T-PEGSHLISCS---------------   73 (327)
Q Consensus        18 ~~~~~-----~~~~l~~~~-~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~---------------   73 (327)
                      ..+++     ||+++.... .++.|.+.|+.+.+....+.- .......+++ + |+++++++++               
T Consensus        90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~  169 (595)
T 1fwx_A           90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED  169 (595)
T ss_dssp             EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred             cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence            45666     777776655 456799999999987774432 2245778887 5 8999998884               


Q ss_pred             ---CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC------------------------------
Q psy7482          74 ---DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK------------------------------  120 (327)
Q Consensus        74 ---~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------------------------------  120 (327)
                         .++.+.+.|.++.+....+..+.  . ...++++|+|+++++.+.+.                              
T Consensus       170 ~~~~~~~vtvID~~t~~v~~qI~Vgg--~-pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~  246 (595)
T 1fwx_A          170 VANYVNVFTAVDADKWEVAWQVLVSG--N-LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA  246 (595)
T ss_dssp             GGGEEEEEEEEETTTTEEEEEEEESS--C-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred             ccccCceEEEEECCCCeEEEEEEeCC--C-ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence               34679999999999888884433  3 56788999999999888653                              


Q ss_pred             --------CEEEEEcCC--Cce-eeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCc----------
Q psy7482         121 --------TLRTWNLVK--GRS-AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG----------  177 (327)
Q Consensus       121 --------~i~iwd~~~--~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~----------  177 (327)
                              .|.+.|.++  ++. +..++....      ..++.++|||++++++.  ++++.++|+.+.+          
T Consensus       247 ~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~------PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~  320 (595)
T 1fwx_A          247 AGDYQELNGVKVVDGRKEASSLFTRYIPIANN------PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR  320 (595)
T ss_dssp             HTCSEEETTEEEEECSGGGCCSSEEEEEEESS------CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG
T ss_pred             CCCeeEECcEEEEeCcccCCceeEEEEecCCC------ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcc
Confidence                    367777766  333 334444333      67899999999888876  8899999998663          


Q ss_pred             --eeeEecCCCceeEEEeecCce-EEEeCCCCcEEEEEcCC----------CceeEEeeecccce-----EEEEEEecCC
Q psy7482         178 --VLQTLKSESKVHSVCFLNETT-VCTGNEESAITAYNLTD----------GSHLWQIKASASRI-----KGLVFFSIPQ  239 (327)
Q Consensus       178 --~~~~~~~~~~i~~~~~~~~~~-l~~~~~d~~i~i~d~~~----------~~~~~~~~~~~~~v-----~~~~~~~s~~  239 (327)
                        .............++|+|++. +++...|+.|..||+..          .+.+.++..|..+-     ..+..  +||
T Consensus       321 ~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~--~~D  398 (595)
T 1fwx_A          321 SAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETL--DAT  398 (595)
T ss_dssp             GGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTST--TCC
T ss_pred             cceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEe--CCC
Confidence              344555667789999999964 45677899999999977          45677776654432     11122  489


Q ss_pred             CcEEEEecC---CCe----------EEEEEcCCCc
Q psy7482         240 ETTVCTGNE---ESA----------ITAYNLTDGS  261 (327)
Q Consensus       240 ~~~l~~~~~---d~~----------i~i~d~~~~~  261 (327)
                      |++|+++..   |+.          -.++|+..++
T Consensus       399 Gk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~  433 (595)
T 1fwx_A          399 NDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK  433 (595)
T ss_dssp             SSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred             CCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence            999998653   432          2889986554

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.41  E-value=1.9e-10  Score=98.04  Aligned_cols=226  Identities=12%  Similarity=0.139  Sum_probs=157.2

Q ss_pred             CCCeEEEecC-CCcEEEEEcCCCeEEEeEEecccCCceeeEEE-e-cCCCEEEEEeC------------------CCCEE
Q psy7482          65 EGSHLISCSD-DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISI-H-PSGKLALSVGK------------------DKTLR  123 (327)
Q Consensus        65 ~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~~------------------dg~i~  123 (327)
                      ||++++.... +..|.+.|+.+.+....+....... +..+++ . |++++++++++                  ++.+.
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~-phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt  178 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKG-IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT  178 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCS-EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCC-CcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence            7788776655 5579999999999888663233334 888888 4 89999998852                  45799


Q ss_pred             EEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C-------------------------------------
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-------------------------------------  165 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-------------------------------------  165 (327)
                      +.|.++.+....+.....      ...++++|+|+++.+++ +                                     
T Consensus       179 vID~~t~~v~~qI~Vgg~------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~  252 (595)
T 1fwx_A          179 AVDADKWEVAWQVLVSGN------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE  252 (595)
T ss_dssp             EEETTTTEEEEEEEESSC------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred             EEECCCCeEEEEEEeCCC------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence            999999888777776543      55677899998877765 2                                     


Q ss_pred             -CeEEEEEecC--Cce-eeEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCc------------eeEEeeeccc
Q psy7482         166 -NKAVVFSVEK--AGV-LQTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGS------------HLWQIKASAS  227 (327)
Q Consensus       166 -~~i~i~d~~~--~~~-~~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~------------~~~~~~~~~~  227 (327)
                       +.|.+.|.++  ++. +..+.-.....++.++|| .+ ++++..+.+|.++|+.+.+            ...++... .
T Consensus       253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~  331 (595)
T 1fwx_A          253 LNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-L  331 (595)
T ss_dssp             ETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-S
T ss_pred             ECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-C
Confidence             1366777776  444 455655566788999999 44 5556688999999998653            23344333 3


Q ss_pred             ceEEEEEEecCCCcEEEEecCCCeEEEEEcCC----------CceeEEeecccCce-----EEEeeeC--cEEEEEecC-
Q psy7482         228 RIKGLVFFSIPQETTVCTGNEESAITAYNLTD----------GSHLWHIKASASRI-----KGLASHR--NHLICITSA-  289 (327)
Q Consensus       228 ~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~----------~~~~~~~~~~~~~v-----~~~~~~~--~~l~~~~~d-  289 (327)
                      ....++|  +++|....+.-.|++|.+||+..          .+.+..+..|..+-     .++..+|  ++|+++..- 
T Consensus       332 gP~h~aF--~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~s  409 (595)
T 1fwx_A          332 GPLHTAF--DGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFS  409 (595)
T ss_dssp             CEEEEEE--CTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCC
T ss_pred             CcceEEE--CCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCC
Confidence            4678889  48996566777899999999987          55677777665432     1223455  777776532 


Q ss_pred             -CcE-----------EEEEccCc
Q psy7482         290 -GDL-----------VVWELNED  300 (327)
Q Consensus       290 -g~v-----------~iw~~~~~  300 (327)
                       ..+           .++|+..+
T Consensus       410 kdr~~~~gp~~~~~~ql~dis~~  432 (595)
T 1fwx_A          410 KDRFLNVGPLKPENDQLIDISGD  432 (595)
T ss_dssp             TTSSCCCCSSCCEEEEEEECSSS
T ss_pred             ccccccCCCCCCCcceEEEcCCC
Confidence             223           78888655

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.41  E-value=2.7e-10  Score=87.13  Aligned_cols=189  Identities=10%  Similarity=0.081  Sum_probs=130.4

Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      +.+.++....... ...+.|+ ++.++.+.+.+|  .|+.+|+++++......+...      .......+++..+....
T Consensus        32 ~vv~~~phd~~~f-tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~------~FgeGit~~g~~ly~lt  103 (262)
T 3nol_A           32 QIVHSYPHDTKAF-TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR------YFGEGISDWKDKIVGLT  103 (262)
T ss_dssp             EEEEEEECCTTCE-EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT------CCEEEEEEETTEEEEEE
T ss_pred             EEEEEecCCCCcc-cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc------cceeEEEEeCCEEEEEE
Confidence            4455552222222 5788998 676677777766  899999999999888776543      33322233344444444


Q ss_pred             --CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecc-----cceEEEEEEec
Q psy7482         165 --QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASA-----SRIKGLVFFSI  237 (327)
Q Consensus       165 --~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~s  237 (327)
                        ++.+.+||..+.+.+.++.....-..++.. .+.|+.+..++.|.++|..+.+.+.++....     ..++.+.+   
T Consensus       104 w~~~~v~v~D~~t~~~~~ti~~~~eG~glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~---  179 (262)
T 3nol_A          104 WKNGLGFVWNIRNLRQVRSFNYDGEGWGLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEW---  179 (262)
T ss_dssp             SSSSEEEEEETTTCCEEEEEECSSCCCCEEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE---
T ss_pred             eeCCEEEEEECccCcEEEEEECCCCceEEecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEE---
Confidence              899999999999999999854433444432 2556666668889999999999888875432     23445777   


Q ss_pred             CCCcEEEEecCCCeEEEEEcCCCceeEEeecc------------cCceEEEeeeC---cEEEEEe
Q psy7482         238 PQETTVCTGNEESAITAYNLTDGSHLWHIKAS------------ASRIKGLASHR---NHLICIT  287 (327)
Q Consensus       238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------------~~~v~~~~~~~---~~l~~~~  287 (327)
                      .+|+..+..-.++.|.+.|.++++.+..+...            ....+.|+|+|   .++++|-
T Consensus       180 ~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          180 VDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             ETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             ECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            47777766667889999999999988877642            13568999999   4555543

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.41  E-value=1.2e-08  Score=92.95  Aligned_cols=276  Identities=8%  Similarity=0.113  Sum_probs=178.4

Q ss_pred             EEEEEe-CCCEEEEecCCCeEEEEEcccccccccc-ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      |.++.. ....|..|..++-|..|+..+++..... ......|.++...+++.+.+ |+.++-+..||..+++..... .
T Consensus       175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~-~  252 (795)
T 4a2l_A          175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYL-H  252 (795)
T ss_dssp             CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEEC-C
T ss_pred             eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEee-c
Confidence            777777 3344555665545888998766543221 12345688888877776544 554445899998876654332 2


Q ss_pred             cc------cCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc--ccCccccceEEEEEccCCcEEEeecCC
Q psy7482          95 AH------KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS--SYGVGFENLDSVVWSPEGLLYAIPIQN  166 (327)
Q Consensus        95 ~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~  166 (327)
                      ..      ....|.++...++|.+.+ |+.+ -|.+||..+++........  ........|.++...++|.+.+...++
T Consensus       253 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~  330 (795)
T 4a2l_A          253 SPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFG  330 (795)
T ss_dssp             CTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSS
T ss_pred             CCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCC
Confidence            11      122389998888886544 5555 5999998776543322111  112223459999999999887776678


Q ss_pred             eEEEEEecCCceeeEec--------CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee--------cccceE
Q psy7482         167 KAVVFSVEKAGVLQTLK--------SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA--------SASRIK  230 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~--------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~v~  230 (327)
                      .|..++..++... .+.        ....|.++...+++.+.+|+.++-+..||..+++.......        ....|.
T Consensus       331 Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~  409 (795)
T 4a2l_A          331 GLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK  409 (795)
T ss_dssp             CEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE
T ss_pred             CeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE
Confidence            8999987655432 221        23568899888888899999988899999876654322111        234678


Q ss_pred             EEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee----cccCceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         231 GLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK----ASASRIKGLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ++...  ++++.|..|+.++-|..+|..+++......    .+...|.++...+ ..|..|+. +-|.+|+..++
T Consensus       410 ~i~~d--~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~  481 (795)
T 4a2l_A          410 AVYVD--EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQR  481 (795)
T ss_dssp             EEEEE--TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTT
T ss_pred             EEEEc--CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCC
Confidence            88773  677757777777789999988776433221    1345788888877 55666666 45888887665

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.41  E-value=1.9e-10  Score=87.94  Aligned_cols=191  Identities=10%  Similarity=0.055  Sum_probs=134.0

Q ss_pred             eEEEeeeeccCCccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccE--EEEEECCCCCeEEEecCCCcEE
Q psy7482           3 TLTQTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTI--TCLKFTPEGSHLISCSDDGSIA   79 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~i~   79 (327)
                      +..+.+. +.-......+.| ++.+..+.+.+|.|+.+|+++++.+..+ -. ...  ..+++.. ++..+..-.++.+.
T Consensus        44 ~Vv~~~p-hd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~~~v~  119 (268)
T 3nok_A           44 HIIREYP-HATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTEGLLF  119 (268)
T ss_dssp             EEEEEEE-CCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSSCEEE
T ss_pred             EEEEEEc-CCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccCCEEE
Confidence            3445553 233345578888 6666678888899999999999988777 22 223  2355543 23444455688999


Q ss_pred             EEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE
Q psy7482          80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL  159 (327)
Q Consensus        80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  159 (327)
                      +||.++.+.+.++.....   -..++  ++++.|+.+..++.|.++|..+.+....+...........++.+.|. +|++
T Consensus       120 V~D~~Tl~~~~ti~~~~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l  193 (268)
T 3nok_A          120 TWSGMPPQRERTTRYSGE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI  193 (268)
T ss_dssp             EEETTTTEEEEEEECSSC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred             EEECCcCcEEEEEeCCCc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence            999999999999844322   23444  56778887777899999999999888777665543223346778877 7777


Q ss_pred             EEeec-CCeEEEEEecCCceeeEecCC--------------CceeEEEeecC--ceEEEeC
Q psy7482         160 YAIPI-QNKAVVFSVEKAGVLQTLKSE--------------SKVHSVCFLNE--TTVCTGN  203 (327)
Q Consensus       160 l~~~~-~~~i~i~d~~~~~~~~~~~~~--------------~~i~~~~~~~~--~~l~~~~  203 (327)
                      ++... ++.|.+.|.++++.+..+...              .-.+.|+++|+  .++++|-
T Consensus       194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            76664 789999999999998887621              35689999997  4555553

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.40  E-value=5e-10  Score=99.55  Aligned_cols=247  Identities=14%  Similarity=0.154  Sum_probs=161.4

Q ss_pred             EeCCCEEEEecCCCeEEEEEccccccccccccccc-cEEEEEECC--CCCeEEEecC------CCcEEEEEcCCCeEEEe
Q psy7482          21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHEG-TITCLKFTP--EGSHLISCSD------DGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        21 ~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~l~~~~~------d~~i~iw~~~~~~~~~~   91 (327)
                      ++.+..++.++.|+.|..+|..+|+.+..+..... ....+.-+|  .+..++++..      +|.|..+|..+|+.+..
T Consensus       114 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~  193 (668)
T 1kv9_A          114 ALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR  193 (668)
T ss_dssp             EEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred             EEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence            34556777888899999999999998876653210 000011111  1335555543      58999999999999887


Q ss_pred             EEecccC-----------------------------CceeeEEEecCCCEEEEEeCCC-------------------CEE
Q psy7482          92 FKKAHKG-----------------------------TAVNHISIHPSGKLALSVGKDK-------------------TLR  123 (327)
Q Consensus        92 ~~~~~~~-----------------------------~~v~~~~~~~~~~~l~~~~~dg-------------------~i~  123 (327)
                      +......                             .....+++.++...++.+..++                   .|.
T Consensus       194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~  273 (668)
T 1kv9_A          194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL  273 (668)
T ss_dssp             EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred             ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence            7321100                             0012468888888888887765                   399


Q ss_pred             EEEcCCCceeeeeeccccCc----cccceEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEecCCC---------
Q psy7482         124 TWNLVKGRSAYITNLSSYGV----GFENLDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSES---------  186 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~~---------  186 (327)
                      .+|.++|+.+..+....+..    ...+.....+..+++   .++.++ +|.++++|..+++.+...+...         
T Consensus       274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~  353 (668)
T 1kv9_A          274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL  353 (668)
T ss_dssp             EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred             EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence            99999999988876543211    011222233334665   566665 9999999999999875433110         


Q ss_pred             ----ce------------------------eEEEeecC-ceEEEe-----------------------------------
Q psy7482         187 ----KV------------------------HSVCFLNE-TTVCTG-----------------------------------  202 (327)
Q Consensus       187 ----~i------------------------~~~~~~~~-~~l~~~-----------------------------------  202 (327)
                          ++                        ..++++|+ +++++.                                   
T Consensus       354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~  433 (668)
T 1kv9_A          354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA  433 (668)
T ss_dssp             TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred             ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence                00                        12567776 554431                                   


Q ss_pred             -CCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         203 -NEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       203 -~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                       ..+|.|..||+.+++.+.+.+.+.. .....+.  ..+.+++.++.|+.++.||.++++.+..++...
T Consensus       434 ~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~--t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~  499 (668)
T 1kv9_A          434 AVVSGALLAWDPVKQKAAWKVPYPTH-WNGGTLS--TAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS  499 (668)
T ss_dssp             GGCEEEEEEEETTTTEEEEEEEESSS-CCCCEEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             CCccceEEEEeCCCCcEEEEccCCCC-CcCceeE--eCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence             1348899999999999888765433 3322332  467788889999999999999999999887653

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.40  E-value=6.2e-11  Score=96.90  Aligned_cols=255  Identities=10%  Similarity=0.063  Sum_probs=163.0

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEec----------CCCeEEEEEccccccccccccc-------cccEEEEEEC
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQH-------EGTITCLKFT   63 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~-------~~~v~~~~~~   63 (327)
                      +.+..+.. |. .+  .+.+  |+++++++.          .++.|.+||+.+++.+.++...       ......++++
T Consensus        57 ~v~~~i~v-G~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~S  132 (368)
T 1mda_H           57 VTLGHSLG-AF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC  132 (368)
T ss_dssp             EEEEEEEE-CT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEEC
T ss_pred             eEEEEEeC-CC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEc
Confidence            44555553 22 23  4666  888888775          3688999999999998887643       1235678999


Q ss_pred             CCCCeEEEecC--CCcEEE--EEcCCCeEEEeEEecccCCceeeEEEecCC-CEEEEEeCCCCEEEEEcCC-----Ccee
Q psy7482          64 PEGSHLISCSD--DGSIAI--FRVGSWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVK-----GRSA  133 (327)
Q Consensus        64 ~~~~~l~~~~~--d~~i~i--w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-----~~~~  133 (327)
                      |||++++++..  +..+.+  +|..+   ...+..+   . ..  .+.|++ ..+++.+.||.+.+.|+.+     ++..
T Consensus       133 pDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~---~-~~--~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~  203 (368)
T 1mda_H          133 ASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA---S-CF--HIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVG  203 (368)
T ss_dssp             TTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS---S-CC--CCEEEETTEEECCCCTTSCEEEECCSSCCCCEECC
T ss_pred             CCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC---C-ce--EEccCCCeEEEEEcCCCCEEEEECccccccCCeEE
Confidence            99999998864  457888  88876   4444221   1 11  123443 3455667789998899876     4332


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCc--eeeEecC-----------CCceeEEEeecC-ceE
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG--VLQTLKS-----------ESKVHSVCFLNE-TTV  199 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~--~~~~~~~-----------~~~i~~~~~~~~-~~l  199 (327)
                      .... ........+.   .....+.++.+.. +.+.+.|..+..  .+..+..           ......++++|+ +++
T Consensus       204 ~~~t-~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~l  278 (368)
T 1mda_H          204 AQCT-GAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGI  278 (368)
T ss_dssp             CCSC-TTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEE
T ss_pred             EEee-eeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEE
Confidence            1110 1111112223   3444445566666 999999986542  2332221           111222689998 666


Q ss_pred             EEeCC---------CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcE-EEEec-CCCeEEEEEcCCCceeEEeec
Q psy7482         200 CTGNE---------ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT-VCTGN-EESAITAYNLTDGSHLWHIKA  268 (327)
Q Consensus       200 ~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~-l~~~~-~d~~i~i~d~~~~~~~~~~~~  268 (327)
                      +++..         ++.+.++|+.+.+.+.++.... ....+++  +++|++ +++.. .++.|.++|+.+++.+.++..
T Consensus       279 yV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~--s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v  355 (368)
T 1mda_H          279 MILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIA--AQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL  355 (368)
T ss_dssp             EEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEE--CCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred             EEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEE--CCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence            65432         2356699999999998887654 5788999  489874 55555 589999999999999999886


Q ss_pred             ccCceEEEeee
Q psy7482         269 SASRIKGLASH  279 (327)
Q Consensus       269 ~~~~v~~~~~~  279 (327)
                      ... ...+++.
T Consensus       356 g~~-P~~i~~~  365 (368)
T 1mda_H          356 DKG-PESLSVQ  365 (368)
T ss_dssp             CSC-CCEEECC
T ss_pred             CCC-CCEEEee
Confidence            553 3455554

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.40  E-value=1.3e-09  Score=84.33  Aligned_cols=207  Identities=13%  Similarity=0.045  Sum_probs=143.5

Q ss_pred             eeEEEeeeeccCCccEEEEEe--CCCEEEEecC--CCeEEEEEcccccccccccccc-ccEEEEEECCCCCeE-EEecCC
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGA--DETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHL-ISCSDD   75 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~--dg~v~~w~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l-~~~~~d   75 (327)
                      ++..+.+.. +.......+.+  ++.+.++.+.  ++.|++.|+.+++.+..+.-.. .....+++.  ++.| ++.-.+
T Consensus         9 ~~vv~~~p~-~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~   85 (266)
T 2iwa_A            9 VEVLNEFPH-DPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK   85 (266)
T ss_dssp             EEEEEEEEC-CTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred             ceEEEEEEC-CCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence            345555542 22234678899  4544444443  5799999999999887765211 122345554  4444 455568


Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP  155 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  155 (327)
                      +.+.++|..+++.+..+..+ ...   ...+++|++.++.+..++.|.++|..+.+....+...........++.+.|. 
T Consensus        86 ~~v~viD~~t~~v~~~i~~g-~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-  160 (266)
T 2iwa_A           86 NIGFIYDRRTLSNIKNFTHQ-MKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-  160 (266)
T ss_dssp             SEEEEEETTTTEEEEEEECC-SSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred             CEEEEEECCCCcEEEEEECC-CCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence            89999999999999988444 122   2346668887777777899999999998877776654322112236788888 


Q ss_pred             CCcEEEeec-CCeEEEEEecCCceeeEecCC--------------CceeEEEeecC--ceEEEeCCCCcEEEEEcCCC
Q psy7482         156 EGLLYAIPI-QNKAVVFSVEKAGVLQTLKSE--------------SKVHSVCFLNE--TTVCTGNEESAITAYNLTDG  216 (327)
Q Consensus       156 ~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~~--------------~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~  216 (327)
                      ++.+++... ++.|.+.|..+++.+..+...              .....++++|+  ..++++...+.+...++...
T Consensus       161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred             CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence            776666554 789999999999998888632              35689999998  46777888899998887654

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.39  E-value=2.9e-10  Score=86.97  Aligned_cols=194  Identities=12%  Similarity=0.168  Sum_probs=131.9

Q ss_pred             eeEEEeeeeccCCccEEEEEe-CCCEEEEecCCC--eEEEEEccccccccccccccccEEEEEECCCCCeEEE-ecCCCc
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA-TSKLAASSGADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLIS-CSDDGS   77 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg--~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~   77 (327)
                      |+..+.+. +.-......|.| ++.+..+.+.+|  .|+.+|+++++.+..+.-.. ........++++.|.. .-.++.
T Consensus        31 ~~vv~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~  108 (262)
T 3nol_A           31 YQIVHSYP-HDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGL  108 (262)
T ss_dssp             EEEEEEEE-CCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSE
T ss_pred             eEEEEEec-CCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCE
Confidence            45666664 233445578888 666666777666  89999999999888776432 2322222223445544 445889


Q ss_pred             EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      +.++|.++.+.+.++.....+   ..+  .++++.|+.+..++.|.++|..+.+....+...........++.+.|. +|
T Consensus       109 v~v~D~~t~~~~~ti~~~~eG---~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G  182 (262)
T 3nol_A          109 GFVWNIRNLRQVRSFNYDGEG---WGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG  182 (262)
T ss_dssp             EEEEETTTCCEEEEEECSSCC---CCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred             EEEEECccCcEEEEEECCCCc---eEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence            999999999999998443322   333  356777777666788999999998887777664322112235667776 77


Q ss_pred             cEEEeec-CCeEEEEEecCCceeeEecCC-------------CceeEEEeecC-ceEEEeC
Q psy7482         158 LLYAIPI-QNKAVVFSVEKAGVLQTLKSE-------------SKVHSVCFLNE-TTVCTGN  203 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~~~-------------~~i~~~~~~~~-~~l~~~~  203 (327)
                      ++++... ++.|.+.|.++++.+..+...             ...+.++++|+ +.|++.+
T Consensus       183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG  243 (262)
T 3nol_A          183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG  243 (262)
T ss_dssp             EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred             EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence            7776664 889999999999998887621             35689999997 5544433

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.38  E-value=6.2e-09  Score=81.90  Aligned_cols=243  Identities=9%  Similarity=0.021  Sum_probs=150.1

Q ss_pred             CEEEEecCCCeEEEEEccccccc-----cccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccC
Q psy7482          25 KLAASSGADETVVLYDMVKRKQS-----GALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKG   98 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~   98 (327)
                      .+|+.+.. +.|+.+++......     ..+......+..++|++++..|+ +-..++.|..++.........+ .....
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~   79 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-RQDLG   79 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-CTTCC
T ss_pred             cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE-ECCCC
Confidence            45555553 47888887654321     11222234578999999665555 4455789999998765543333 22223


Q ss_pred             CceeeEEEecCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE-Eeec---CCeEEEEEe
Q psy7482          99 TAVNHISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY-AIPI---QNKAVVFSV  173 (327)
Q Consensus        99 ~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~---~~~i~i~d~  173 (327)
                      . ...+++++++..|+.+ ...+.|.++++.......... ..    ......++++|++..+ ++..   .+.|..+++
T Consensus        80 ~-p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~----~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~  153 (267)
T 1npe_A           80 S-PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD-TG----LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM  153 (267)
T ss_dssp             C-EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-SS----CSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred             C-ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE-CC----CCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence            4 7899999976655555 456789999986433222211 11    1237899999965544 4433   368888887


Q ss_pred             cCCceeeEec--CCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC
Q psy7482         174 EKAGVLQTLK--SESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE  249 (327)
Q Consensus       174 ~~~~~~~~~~--~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d  249 (327)
                      ... ....+.  .-.....++++++ +. +++-...+.|..+|.........+.. ......++.   .++..+++....
T Consensus       154 dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~---d~~~lyva~~~~  228 (267)
T 1npe_A          154 DGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTS---YGKNLYYTDWKT  228 (267)
T ss_dssp             TSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEE---ETTEEEEEETTT
T ss_pred             CCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEE---eCCEEEEEECCC
Confidence            543 333332  3356889999996 54 45566778999999875443333332 223456665   345555555567


Q ss_pred             CeEEEEEcCCCceeEEeeccc-CceEEEeeeC
Q psy7482         250 SAITAYNLTDGSHLWHIKASA-SRIKGLASHR  280 (327)
Q Consensus       250 ~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~  280 (327)
                      +.|..+|..+++.+..+.... .....+++.|
T Consensus       229 ~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~  260 (267)
T 1npe_A          229 NSVIAMDLAISKEMDTFHPHKQTRLYGITIAL  260 (267)
T ss_dssp             TEEEEEETTTTEEEEEECCSSCCCCCCEEEEC
T ss_pred             CeEEEEeCCCCCceEEEccccccccceeeecC
Confidence            899999999999888876443 2456777666

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.37  E-value=9.8e-10  Score=95.75  Aligned_cols=271  Identities=11%  Similarity=0.089  Sum_probs=170.5

Q ss_pred             CCCEEEEecC-CCeEEEEEc-cccccccccccccc-c---------E-EEEEECCCCCeEEEecCCCcEEEEEcCCCeEE
Q psy7482          23 TSKLAASSGA-DETVVLYDM-VKRKQSGALMQHEG-T---------I-TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        23 ~~~~l~~~~~-dg~v~~w~~-~~~~~~~~~~~~~~-~---------v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      .+..++.++. ++.|.-+|. .+++.+..+..... .         + ..++.  .+..++.++.|+.+..+|..+|+.+
T Consensus        61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~  138 (571)
T 2ad6_A           61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKIN  138 (571)
T ss_dssp             ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred             ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence            3555666666 889999999 89988766542211 0         0 11222  3567888888999999999999988


Q ss_pred             EeEEecccC--Cceee-EEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCc-----------------
Q psy7482          90 KLFKKAHKG--TAVNH-ISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGV-----------------  143 (327)
Q Consensus        90 ~~~~~~~~~--~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~-----------------  143 (327)
                      .........  ..+.+ .... ++ .++.++.      +|.|..+|.++|+.+..........                 
T Consensus       139 W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~  216 (571)
T 2ad6_A          139 WEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ  216 (571)
T ss_dssp             EEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred             EEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence            776332210  01221 1111 34 5666654      7899999999999887765432210                 


Q ss_pred             ----------------cccceEEEEEccCCcEEEeec-C----------------CeEEEEEecCCceeeEecCC---C-
Q psy7482         144 ----------------GFENLDSVVWSPEGLLYAIPI-Q----------------NKAVVFSVEKAGVLQTLKSE---S-  186 (327)
Q Consensus       144 ----------------~~~~v~~~~~~~~~~~l~~~~-~----------------~~i~i~d~~~~~~~~~~~~~---~-  186 (327)
                                      .......+++.++...+..+. +                +.|..+|.++++.+..++..   . 
T Consensus       217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~  296 (571)
T 2ad6_A          217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW  296 (571)
T ss_dssp             SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred             cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence                            000002355666555554443 1                36999999999998887621   0 


Q ss_pred             ---ceeE---EEeecCc----eEEEeCCCCcEEEEEcCCCceeEEeeecc-------------cce--------------
Q psy7482         187 ---KVHS---VCFLNET----TVCTGNEESAITAYNLTDGSHLWQIKASA-------------SRI--------------  229 (327)
Q Consensus       187 ---~i~~---~~~~~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v--------------  229 (327)
                         .+..   +....++    .++.++.+|.++++|..+++.+...+...             .++              
T Consensus       297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~  376 (571)
T 2ad6_A          297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT  376 (571)
T ss_dssp             CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred             ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence               1111   2222343    46778899999999999999887764321             111              


Q ss_pred             ------------EEEEEEecCCCcEEEEec-------------------------------------CCCeEEEEEcCCC
Q psy7482         230 ------------KGLVFFSIPQETTVCTGN-------------------------------------EESAITAYNLTDG  260 (327)
Q Consensus       230 ------------~~~~~~~s~~~~~l~~~~-------------------------------------~d~~i~i~d~~~~  260 (327)
                                  ..+++.  |+..++++..                                     .++.|..||+.++
T Consensus       377 ~~~P~~~Gg~~w~~~a~d--p~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG  454 (571)
T 2ad6_A          377 NICPSAMGFHNQGVDSYD--PESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTG  454 (571)
T ss_dssp             EESSCTTCSSCSCBCEEE--TTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTC
T ss_pred             EECCCCccccCCCCceEC--CCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCC
Confidence                        123453  5655555432                                     3578999999999


Q ss_pred             ceeEEeecccCceEEEee--eCcEEEEEecCCcEEEEEccCc
Q psy7482         261 SHLWHIKASASRIKGLAS--HRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       261 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +.++++.... .+.+...  ....++.++.||.|+.||..++
T Consensus       455 ~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG  495 (571)
T 2ad6_A          455 KAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDG  495 (571)
T ss_dssp             CEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             CEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence            9998886433 2332222  2377888999999999999888

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.37  E-value=1.6e-09  Score=94.44  Aligned_cols=244  Identities=16%  Similarity=0.131  Sum_probs=158.0

Q ss_pred             EeCCCEEEEecCCCeEEEEEcccccccccccccc--c--cEEE-EEECCCCCeEEEecC------CCcEEEEEcCCCeEE
Q psy7482          21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHE--G--TITC-LKFTPEGSHLISCSD------DGSIAIFRVGSWQLE   89 (327)
Q Consensus        21 ~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~--~--~v~~-~~~~~~~~~l~~~~~------d~~i~iw~~~~~~~~   89 (327)
                      +..+..++.++.|+.|..+|..+++.+.......  .  .+.+ .... ++ .+++++.      ++.|..+|.++++.+
T Consensus       112 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~  189 (571)
T 2ad6_A          112 AYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELK  189 (571)
T ss_dssp             EEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred             EEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEE
Confidence            4456677888889999999999998876554211  0  1111 1111 34 5555554      789999999999988


Q ss_pred             EeEEecccC------------------------------------CceeeEEEecCCCEEEEEeCC--------------
Q psy7482          90 KLFKKAHKG------------------------------------TAVNHISIHPSGKLALSVGKD--------------  119 (327)
Q Consensus        90 ~~~~~~~~~------------------------------------~~v~~~~~~~~~~~l~~~~~d--------------  119 (327)
                      ..+......                                    .....+++.++...++.+..+              
T Consensus       190 W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~  269 (571)
T 2ad6_A          190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK  269 (571)
T ss_dssp             EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred             EEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCce
Confidence            876322110                                    000235667766677766532              


Q ss_pred             --CCEEEEEcCCCceeeeeeccccC-----ccccceEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEecCCC--
Q psy7482         120 --KTLRTWNLVKGRSAYITNLSSYG-----VGFENLDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSES--  186 (327)
Q Consensus       120 --g~i~iwd~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~~--  186 (327)
                        +.|..+|.++++.+..+....+.     ....++ -+...++|+   +++.+. +|.++++|..+++.+...+...  
T Consensus       270 y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~  348 (571)
T 2ad6_A          270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAV  348 (571)
T ss_dssp             TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTC
T ss_pred             eEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCc
Confidence              25999999999998877654321     111112 223334674   455565 8999999999999887765211  


Q ss_pred             ------------ce--------------------------eEEEeecC-ceEEEeC------------------------
Q psy7482         187 ------------KV--------------------------HSVCFLNE-TTVCTGN------------------------  203 (327)
Q Consensus       187 ------------~i--------------------------~~~~~~~~-~~l~~~~------------------------  203 (327)
                                  ++                          ..++++|+ +++++..                        
T Consensus       349 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~  428 (571)
T 2ad6_A          349 NVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGAT  428 (571)
T ss_dssp             CSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred             cccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccc
Confidence                        11                          23567776 6655532                        


Q ss_pred             -------------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         204 -------------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       204 -------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                                   .+|.+..||..+++.+.+++... ++....+.  ..+..++.++.|+.++.+|.++++.+.++....
T Consensus       429 ~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~--t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~  505 (571)
T 2ad6_A          429 LAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLY--TKGGLVWYATLDGYLKALDNKDGKELWNFKMPS  505 (571)
T ss_dssp             EEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             ceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEE--ECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence                         35789999999999988876432 22222222  345667778999999999999999999887543

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.36  E-value=2.9e-09  Score=80.82  Aligned_cols=189  Identities=12%  Similarity=0.090  Sum_probs=130.9

Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      +.+.+++...... ...+.|++ +.+..+.+.+|  .|+.+|+.+++......+.....    -..++..  +..+....
T Consensus        10 ~v~~~~phd~~~f-tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f----geGi~~~--~~~ly~lt   81 (243)
T 3mbr_X           10 RVVKRYPHDTTAF-TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF----GAGIVAW--RDRLIQLT   81 (243)
T ss_dssp             EEEEEEECCTTCC-EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC----EEEEEEE--TTEEEEEE
T ss_pred             EEEEEcCCCCccc-cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc----eeEEEEe--CCEEEEEE
Confidence            4555552222233 67899986 55666666654  89999999999988877765411    1233333  44444333


Q ss_pred             --CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecc-----cceEEEEEEec
Q psy7482         165 --QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASA-----SRIKGLVFFSI  237 (327)
Q Consensus       165 --~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~s  237 (327)
                        ++.+.+||..+.+.+.++.....-..++... +.|+.+..++.|.++|..+.+.+.++....     ..++.+.+   
T Consensus        82 w~~~~v~v~D~~tl~~~~ti~~~~~Gwglt~dg-~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~---  157 (243)
T 3mbr_X           82 WRNHEGFVYDLATLTPRARFRYPGEGWALTSDD-SHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW---  157 (243)
T ss_dssp             SSSSEEEEEETTTTEEEEEEECSSCCCEEEECS-SCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE---
T ss_pred             eeCCEEEEEECCcCcEEEEEeCCCCceEEeeCC-CEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE---
Confidence              8999999999999999998554444555432 556655668899999999999888876432     24556776   


Q ss_pred             CCCcEEEEecCCCeEEEEEcCCCceeEEeecc-------------cCceEEEeeeC---cEEEEEe
Q psy7482         238 PQETTVCTGNEESAITAYNLTDGSHLWHIKAS-------------ASRIKGLASHR---NHLICIT  287 (327)
Q Consensus       238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~---~~l~~~~  287 (327)
                      .+|+..+..-.+..|.+.|.++++.+..+...             ....+.|+++|   +++++|-
T Consensus       158 ~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          158 VNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             ETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             eCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            57777766667889999999999988877632             13568899998   5555554

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=99.34  E-value=2.8e-09  Score=80.91  Aligned_cols=194  Identities=12%  Similarity=0.111  Sum_probs=132.6

Q ss_pred             eeEEEeeeeccCCccEEEEEe-CCCEEEEecCC--CeEEEEEcccccccccccccccc-EEEEEECCCCCeEEEecCCCc
Q psy7482           2 YTLTQTFVTHSHTASVRSVAA-TSKLAASSGAD--ETVVLYDMVKRKQSGALMQHEGT-ITCLKFTPEGSHLISCSDDGS   77 (327)
Q Consensus         2 ~~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~d--g~v~~w~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~   77 (327)
                      |++.+.+. +........+.| ++.+..+.+.+  ..|+.+|+.+++.+..+.-.... -..+++. .++.....-.++.
T Consensus         9 ~~v~~~~p-hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~   86 (243)
T 3mbr_X            9 YRVVKRYP-HDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHE   86 (243)
T ss_dssp             EEEEEEEE-CCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred             eEEEEEcC-CCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence            56777774 234466779999 55555566654  48999999999988776532221 1233443 2334445566889


Q ss_pred             EEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        78 i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      +.+||.++.+.+.++.....   -..++  ++++.|+.+..++.|.++|..+.+....+...........++.+.+. +|
T Consensus        87 v~v~D~~tl~~~~ti~~~~~---Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G  160 (243)
T 3mbr_X           87 GFVYDLATLTPRARFRYPGE---GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG  160 (243)
T ss_dssp             EEEEETTTTEEEEEEECSSC---CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred             EEEEECCcCcEEEEEeCCCC---ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC
Confidence            99999999999999844332   23444  56777777777889999999998887777665432222336677766 67


Q ss_pred             cEEEeec-CCeEEEEEecCCceeeEecC--------------CCceeEEEeecC-c-eEEEeC
Q psy7482         158 LLYAIPI-QNKAVVFSVEKAGVLQTLKS--------------ESKVHSVCFLNE-T-TVCTGN  203 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~~~~~~~~~--------------~~~i~~~~~~~~-~-~l~~~~  203 (327)
                      ++++... ++.|.+.|.++++.+..+..              ..-.+.++++|+ + ++++|-
T Consensus       161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK  223 (243)
T 3mbr_X          161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK  223 (243)
T ss_dssp             EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred             EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence            7666664 78999999999999888761              124688999997 4 445553

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.33  E-value=5.1e-09  Score=91.28  Aligned_cols=273  Identities=10%  Similarity=0.053  Sum_probs=170.7

Q ss_pred             CCCEEEEecC-CCeEEEEEc-cccccccccccccc-----------cEEEEEECCCCCe----EEEecCCCcEEEEEcCC
Q psy7482          23 TSKLAASSGA-DETVVLYDM-VKRKQSGALMQHEG-----------TITCLKFTPEGSH----LISCSDDGSIAIFRVGS   85 (327)
Q Consensus        23 ~~~~l~~~~~-dg~v~~w~~-~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~----l~~~~~d~~i~iw~~~~   85 (327)
                      .+..++.++. ++.|.-+|. .+++.+..+.....           ....+++.|.+..    ++.++.|+.|..+|..+
T Consensus        61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T  140 (599)
T 1w6s_A           61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET  140 (599)
T ss_dssp             ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred             ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence            3556666666 889999999 89988766543211           0123455444444    88888999999999999


Q ss_pred             CeEEEeEEecccC--Cceee-EEEecCCCEEEEEe------CCCCEEEEEcCCCceeeeeeccccCcc------------
Q psy7482          86 WQLEKLFKKAHKG--TAVNH-ISIHPSGKLALSVG------KDKTLRTWNLVKGRSAYITNLSSYGVG------------  144 (327)
Q Consensus        86 ~~~~~~~~~~~~~--~~v~~-~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~------------  144 (327)
                      |+.+.........  ..+.+ ..+. ++ .+++++      .+|.|+.+|.++|+.+...........            
T Consensus       141 G~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~  218 (599)
T 1w6s_A          141 GETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP  218 (599)
T ss_dssp             CCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred             CCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence            9988776322210  01221 1122 34 455554      379999999999998877665432100            


Q ss_pred             --------------------ccce-EEEEEccCCcEEEeec-C----------------CeEEEEEecCCceeeEecCC-
Q psy7482         145 --------------------FENL-DSVVWSPEGLLYAIPI-Q----------------NKAVVFSVEKAGVLQTLKSE-  185 (327)
Q Consensus       145 --------------------~~~v-~~~~~~~~~~~l~~~~-~----------------~~i~i~d~~~~~~~~~~~~~-  185 (327)
                                          ...+ ..+++.++..++..+. +                +.|..+|.++++.+..++.. 
T Consensus       219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~  298 (599)
T 1w6s_A          219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP  298 (599)
T ss_dssp             GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred             cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence                                0000 1345566666666554 3                38999999999998887721 


Q ss_pred             C---------ceeEEEee-cCc----eEEEeCCCCcEEEEEcCCCceeEEeeecc-------------cce---------
Q psy7482         186 S---------KVHSVCFL-NET----TVCTGNEESAITAYNLTDGSHLWQIKASA-------------SRI---------  229 (327)
Q Consensus       186 ~---------~i~~~~~~-~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v---------  229 (327)
                      .         ...-+... .++    .++.++.+|.++++|.++++.+...+...             .++         
T Consensus       299 ~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~  378 (599)
T 1w6s_A          299 HDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM  378 (599)
T ss_dssp             TCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred             CccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence            1         11112222 233    56778899999999999999887654211             111         


Q ss_pred             -----------------EEEEEEecCCCcEEEEe---------------------------------c------CCCeEE
Q psy7482         230 -----------------KGLVFFSIPQETTVCTG---------------------------------N------EESAIT  253 (327)
Q Consensus       230 -----------------~~~~~~~s~~~~~l~~~---------------------------------~------~d~~i~  253 (327)
                                       ..+++.  |+..++++.                                 +      .+|.|.
T Consensus       379 ~~~~~~~~P~~~Gg~~w~~~a~d--p~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~  456 (599)
T 1w6s_A          379 DHLAKDICPSAMGYHNQGHDSYD--PKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIK  456 (599)
T ss_dssp             TCCEEEESSCTTCSSCSCBCEEE--TTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEE
T ss_pred             CCCccEeccCcccccCCCCccCC--CCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEE
Confidence                             123332  443333321                                 1      457899


Q ss_pred             EEEcCCCceeEEeecccCceE-E-EeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         254 AYNLTDGSHLWHIKASASRIK-G-LASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       254 i~d~~~~~~~~~~~~~~~~v~-~-~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .||+.+++.+++..... +.. . +.....+++.++.||.++.||..++
T Consensus       457 A~D~~tG~~~W~~~~~~-~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG  504 (599)
T 1w6s_A          457 AYNAITGDYKWEKMERF-AVWGGTMATAGDLVFYGTLDGYLKARDSDTG  504 (599)
T ss_dssp             EECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             EEECCCCCEEeEecCCC-CccCcceEecCCEEEEECCCCeEEEEECCCC
Confidence            99999999988876322 222 2 2333378888999999999999998

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.33  E-value=1.8e-09  Score=82.62  Aligned_cols=189  Identities=14%  Similarity=0.156  Sum_probs=131.2

Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-cC
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-IQ  165 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~  165 (327)
                      +.+.++....... ...+.|+ ++.+..+.+.+|.|+.+|+++++..... +....    .-..+++..+ +++... .+
T Consensus        44 ~Vv~~~phd~~~f-tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~----FgeGit~~g~-~Ly~ltw~~  115 (268)
T 3nok_A           44 HIIREYPHATNAF-TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI----FAEGLASDGE-RLYQLTWTE  115 (268)
T ss_dssp             EEEEEEECCTTCC-EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC----CEEEEEECSS-CEEEEESSS
T ss_pred             EEEEEEcCCCccc-cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc----ceeEEEEeCC-EEEEEEccC
Confidence            4445552222222 5788887 4667777788899999999999988877 55431    0223555433 333333 38


Q ss_pred             CeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecc--c---ceEEEEEEecCCC
Q psy7482         166 NKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASA--S---RIKGLVFFSIPQE  240 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~---~v~~~~~~~s~~~  240 (327)
                      +.+.+||..+.+.+.++.....-..+++.. +.|+.+..++.|.++|..+.+.+.++....  .   .++.+.|   .+|
T Consensus       116 ~~v~V~D~~Tl~~~~ti~~~~eGwGLt~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~---~dG  191 (268)
T 3nok_A          116 GLLFTWSGMPPQRERTTRYSGEGWGLCYWN-GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC---ANG  191 (268)
T ss_dssp             CEEEEEETTTTEEEEEEECSSCCCCEEEET-TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE---ETT
T ss_pred             CEEEEEECCcCcEEEEEeCCCceeEEecCC-CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE---eCC
Confidence            999999999999999998544444555432 566666679999999999999888775422  2   3466777   478


Q ss_pred             cEEEEecCCCeEEEEEcCCCceeEEeecc-------------cCceEEEeeeC---cEEEEEe
Q psy7482         241 TTVCTGNEESAITAYNLTDGSHLWHIKAS-------------ASRIKGLASHR---NHLICIT  287 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~---~~l~~~~  287 (327)
                      +..+..-.+..|.+.|.++++.+..+...             ....+.|+++|   ++++||-
T Consensus       192 ~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          192 VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            77766667889999999999988777642             13578999998   6666654

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.33  E-value=1.6e-08  Score=92.12  Aligned_cols=274  Identities=12%  Similarity=0.138  Sum_probs=174.1

Q ss_pred             EEEEEe--CCCEEEEecCCCeEEEEEccccccccccccc-ccc-EEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQH-EGT-ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~-~~~-v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      |.++..  ++.+.+ ++. +-+..||..+++........ ... |.++...+++.+.+ ++.++.|..|+..+++.....
T Consensus       133 i~~i~~d~~g~lwi-~t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~  209 (795)
T 4a2l_A          133 VNGIEEISPEQLLI-STP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVI  209 (795)
T ss_dssp             CCEEEEEETTEEEE-EET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC
T ss_pred             EEEEEECCCCCEEE-EEC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEec
Confidence            777777  454444 444 45889997765433221111 123 88888877776544 665555889998776654432


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc--ccCccccceEEEEEccCCcEEEeecCCeEEE
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS--SYGVGFENLDSVVWSPEGLLYAIPIQNKAVV  170 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i  170 (327)
                      ....... |.++...+++.+ ..++.++-+..||..+++........  ........|.++...++|.+.+...+ .+.+
T Consensus       210 ~~~~~~~-i~~i~~d~~g~l-wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~  286 (795)
T 4a2l_A          210 PILGTKQ-IQAILQQSPTRI-WVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNI  286 (795)
T ss_dssp             ----CCC-EEEEEEEETTEE-EEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEE
T ss_pred             CCCCCCe-eEEEEEcCCCCE-EEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhhe
Confidence            1222334 888888877764 44555545999998776543322111  01122345999999998887766545 7899


Q ss_pred             EEecCCceeeEec--------CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee-------cccceEEEEEE
Q psy7482         171 FSVEKAGVLQTLK--------SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA-------SASRIKGLVFF  235 (327)
Q Consensus       171 ~d~~~~~~~~~~~--------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~~  235 (327)
                      ||..+++......        ....|.++...+++.+.+|+.++-|..|+....... .+..       ....|.++.. 
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~-  364 (795)
T 4a2l_A          287 YHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVE-  364 (795)
T ss_dssp             EETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEE-
T ss_pred             EcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEE-
Confidence            9987765433221        235689999988889999999888999987654322 2211       2345788876 


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEee--------cccCceEEEeeeC-cE-EEEEecCCcEEEEEccCc
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIK--------ASASRIKGLASHR-NH-LICITSAGDLVVWELNED  300 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------~~~~~v~~~~~~~-~~-l~~~~~dg~v~iw~~~~~  300 (327)
                       +++|. |..|+.++-|..|+..+++......        .....|.++...+ .. |..|+.++-|..|+..++
T Consensus       365 -d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~  437 (795)
T 4a2l_A          365 -DKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSG  437 (795)
T ss_dssp             -CTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred             -CCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence             35554 5567777789999987765433221        1235788998877 54 788888778999998776

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.32  E-value=3.6e-09  Score=87.23  Aligned_cols=219  Identities=11%  Similarity=0.077  Sum_probs=142.6

Q ss_pred             CCCEE-EEecCCCeEEEEEcccc----ccccccc------c-ccccEEEEEECCCCCeEEEecCC------CcEEEEEcC
Q psy7482          23 TSKLA-ASSGADETVVLYDMVKR----KQSGALM------Q-HEGTITCLKFTPEGSHLISCSDD------GSIAIFRVG   84 (327)
Q Consensus        23 ~~~~l-~~~~~dg~v~~w~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~~   84 (327)
                      ++++| +++..++.|.++|+.+.    +...++.      . ....-..+...|+| .++++..+      +.|.+.|.+
T Consensus        94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~  172 (462)
T 2ece_A           94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY  172 (462)
T ss_dssp             CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred             cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence            35554 56677899999998754    4444442      1 11245667888999 66665555      789999999


Q ss_pred             CCeEEEeEEecccC-CceeeEEEecCCCEEEEEe-------------------CCCCEEEEEcCCCceeeeeeccccCcc
Q psy7482          85 SWQLEKLFKKAHKG-TAVNHISIHPSGKLALSVG-------------------KDKTLRTWNLVKGRSAYITNLSSYGVG  144 (327)
Q Consensus        85 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~  144 (327)
                      +++.+..+..+... .--..+.|+|+++.+++..                   .+.+|.+||+.+++....+.....   
T Consensus       173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~---  249 (462)
T 2ece_A          173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE---  249 (462)
T ss_dssp             TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT---
T ss_pred             CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC---
Confidence            99999888433221 1134578899999888874                   368999999998877777666422   


Q ss_pred             ccceEEEEE--ccCCcEEEee-------cCCeEEEEEecCCce--eeEe--cC-----------------CCceeEEEee
Q psy7482         145 FENLDSVVW--SPEGLLYAIP-------IQNKAVVFSVEKAGV--LQTL--KS-----------------ESKVHSVCFL  194 (327)
Q Consensus       145 ~~~v~~~~~--~~~~~~l~~~-------~~~~i~i~d~~~~~~--~~~~--~~-----------------~~~i~~~~~~  194 (327)
                      ......+.|  +|+++++.++       .+++|.+|....++.  .+.+  ..                 ......+.++
T Consensus       250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS  329 (462)
T 2ece_A          250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS  329 (462)
T ss_dssp             EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred             CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence            112455655  9999866554       346787766554321  1111  10                 2457889999


Q ss_pred             cC-ceEE-EeCCCCcEEEEEcCCC---ceeEEeeecc--------------cceEEEEEEecCCCcEEEEec
Q psy7482         195 NE-TTVC-TGNEESAITAYNLTDG---SHLWQIKASA--------------SRIKGLVFFSIPQETTVCTGN  247 (327)
Q Consensus       195 ~~-~~l~-~~~~d~~i~i~d~~~~---~~~~~~~~~~--------------~~v~~~~~~~s~~~~~l~~~~  247 (327)
                      +| ++|. +.-..+.|.+||+...   +.+..+....              +.-..+++  +|+|++|+++.
T Consensus       330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~l--SpDGk~LyVaN  399 (462)
T 2ece_A          330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEI--SRDGRRVYVTN  399 (462)
T ss_dssp             TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEE--CTTSSEEEEEC
T ss_pred             CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEE--cCCCCEEEEEc
Confidence            99 4444 4456789999998633   3444443220              12467777  59999999887

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.31  E-value=4.6e-09  Score=85.08  Aligned_cols=238  Identities=8%  Similarity=0.010  Sum_probs=146.7

Q ss_pred             eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc--------------------cccccEEEEEECC-
Q psy7482           8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM--------------------QHEGTITCLKFTP-   64 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~--------------------~~~~~v~~~~~~~-   64 (327)
                      +.+.+.-....++++  ++++++++..++.|..|+..+++.. .+.                    .....+..+++.+ 
T Consensus        12 i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~   90 (322)
T 2fp8_A           12 ILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ   90 (322)
T ss_dssp             EEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT
T ss_pred             eecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCC
Confidence            334343344556777  6777888888999999998765332 111                    0123578899997 


Q ss_pred             CCCeEEEecCCCcEEEEEcCCCeEEEeEEe---cccCCceeeEEEec-CCCEEEEEeC-----------------CCCEE
Q psy7482          65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKK---AHKGTAVNHISIHP-SGKLALSVGK-----------------DKTLR  123 (327)
Q Consensus        65 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---~~~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~  123 (327)
                      +++ |+.+...+.|..+|..+++.. .+..   +........+++.+ +|++.++-..                 ++.|.
T Consensus        91 ~g~-l~v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~  168 (322)
T 2fp8_A           91 NNQ-LYIVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLI  168 (322)
T ss_dssp             TTE-EEEEETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred             CCc-EEEEECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEE
Confidence            555 555544455888887755432 2211   11111278899999 8876665432                 36788


Q ss_pred             EEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c-CCeEEEEEecCCc--eeeEe-cCCCceeEEEeecCce
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-QNKAVVFSVEKAG--VLQTL-KSESKVHSVCFLNETT  198 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~d~~~~~--~~~~~-~~~~~i~~~~~~~~~~  198 (327)
                      .+|..+++.........      ....++++|+++.+.++ . .+.|..|++....  ....+ ...+ ...+++.+++.
T Consensus       169 ~~d~~~~~~~~~~~~~~------~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~  241 (322)
T 2fp8_A          169 KYDPSTKETTLLLKELH------VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH  241 (322)
T ss_dssp             EEETTTTEEEEEEEEES------CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC
T ss_pred             EEeCCCCEEEEeccCCc------cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC
Confidence            88887665432221111      26689999999866555 3 6899999987531  11122 1233 78899999855


Q ss_pred             EEEeCC-----------CCcEEEEEcCCCceeEEeeecc----cceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         199 VCTGNE-----------ESAITAYNLTDGSHLWQIKASA----SRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       199 l~~~~~-----------d~~i~i~d~~~~~~~~~~~~~~----~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      ++++..           .+.|..+|. .++.+..+....    ..+..+++   .+++++++....+.|..+++..
T Consensus       242 l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~---~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          242 FWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE---HDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             EEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE---ETTEEEEECSSCSEEEEEEC--
T ss_pred             EEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE---eCCEEEEeecCCCceEEEeccc
Confidence            555443           366888886 477766665432    34666665   5677777777788899998754

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.31  E-value=2.2e-08  Score=78.72  Aligned_cols=213  Identities=10%  Similarity=0.062  Sum_probs=135.6

Q ss_pred             cEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEe
Q psy7482          16 SVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        16 ~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .+..+++  +++ ++++-..++.|..+++........+.........+++.|++..|+ +-...+.|.+++.+.... ..
T Consensus        37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~  115 (267)
T 1npe_A           37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RV  115 (267)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred             cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EE
Confidence            3557777  344 455555678999999876543333322234678999999755554 445567899999864332 22


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeC---CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGK---DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN  166 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~  166 (327)
                      +....... ...++++|++..|+.+..   .+.|..+++... ....+....    ......++++|++..|..+.  .+
T Consensus       116 ~~~~~~~~-P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~----~~~P~gia~d~~~~~lyv~d~~~~  189 (267)
T 1npe_A          116 LFDTGLVN-PRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDN----LGLPNGLTFDAFSSQLCWVDAGTH  189 (267)
T ss_dssp             EECSSCSS-EEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTT----CSCEEEEEEETTTTEEEEEETTTT
T ss_pred             EEECCCCC-ccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECC----CCCCcEEEEcCCCCEEEEEECCCC
Confidence            31222234 789999997666665554   367888887543 222221111    12378999999876655553  68


Q ss_pred             eEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeeccc-ceEEEEEE
Q psy7482         167 KAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASAS-RIKGLVFF  235 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~  235 (327)
                      .|..+|.........+........++...+..+++....+.|..+|..+++.+..+..... ....+++.
T Consensus       190 ~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~  259 (267)
T 1npe_A          190 RAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIA  259 (267)
T ss_dssp             EEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEE
T ss_pred             EEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeec
Confidence            9999998765444444433445677766435566666778999999999988888764432 35677774

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.30  E-value=4.1e-09  Score=92.00  Aligned_cols=246  Identities=13%  Similarity=0.098  Sum_probs=155.6

Q ss_pred             EeCCCEEEEecCCCeEEEEEccccccccccccccc----cEE-EEEECC---CCC-eEEEec------CCCcEEEEEcCC
Q psy7482          21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHEG----TIT-CLKFTP---EGS-HLISCS------DDGSIAIFRVGS   85 (327)
Q Consensus        21 ~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~----~v~-~~~~~~---~~~-~l~~~~------~d~~i~iw~~~~   85 (327)
                      +..+..++.++.|+.|..+|..+|+.+........    .+. ......   +++ .+++++      .++.|.-+|..+
T Consensus       114 a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t  193 (582)
T 1flg_A          114 AIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT  193 (582)
T ss_dssp             EEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred             EEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence            34456677788899999999999988766543210    111 001111   233 566655      378999999999


Q ss_pred             CeEEEeEEeccc----------------C-----------------------CceeeEEEecCCCEEEEEeC--------
Q psy7482          86 WQLEKLFKKAHK----------------G-----------------------TAVNHISIHPSGKLALSVGK--------  118 (327)
Q Consensus        86 ~~~~~~~~~~~~----------------~-----------------------~~v~~~~~~~~~~~l~~~~~--------  118 (327)
                      |+.+........                .                       ..-..+++.|+..+++.+..        
T Consensus       194 G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~  273 (582)
T 1flg_A          194 GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW  273 (582)
T ss_dssp             CCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred             CCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence            988776522100                0                       00023566776677776653        


Q ss_pred             ------------C----CCEEEEEcCCCceeeeeeccccCc-----cccceEEEEEc-cCCc---EEEeec-CCeEEEEE
Q psy7482         119 ------------D----KTLRTWNLVKGRSAYITNLSSYGV-----GFENLDSVVWS-PEGL---LYAIPI-QNKAVVFS  172 (327)
Q Consensus       119 ------------d----g~i~iwd~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~-~~~~---~l~~~~-~~~i~i~d  172 (327)
                                  |    +.|..+|.++|+.+..+....+..     ...++ -+... .+|+   .++.++ +|.++++|
T Consensus       274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD  352 (582)
T 1flg_A          274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVD  352 (582)
T ss_dssp             GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred             ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEE
Confidence                        2    579999999999988876543210     01112 12222 4563   566665 89999999


Q ss_pred             ecCCceeeEecCCC--------------ce--------------------------------eEEEeecC-ceEEEeC--
Q psy7482         173 VEKAGVLQTLKSES--------------KV--------------------------------HSVCFLNE-TTVCTGN--  203 (327)
Q Consensus       173 ~~~~~~~~~~~~~~--------------~i--------------------------------~~~~~~~~-~~l~~~~--  203 (327)
                      .++++.+..+....              ++                                ..++++|+ +++++..  
T Consensus       353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~  432 (582)
T 1flg_A          353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH  432 (582)
T ss_dssp             TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred             CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence            99999887665221              00                                12455665 4444321  


Q ss_pred             -------------------------------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeE
Q psy7482         204 -------------------------------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAI  252 (327)
Q Consensus       204 -------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i  252 (327)
                                                     .+|.|..||+.+++.+.+.+... +...-...  ..+.+++.++.|+.+
T Consensus       433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~--tagglvf~g~~dg~l  509 (582)
T 1flg_A          433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLA--TAGNLVFTGTGDGYF  509 (582)
T ss_dssp             EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEE--ETTTEEEEECTTSEE
T ss_pred             cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceE--eCCCEEEEECCCCcE
Confidence                                           36889999999999988876443 22221121  346677789999999


Q ss_pred             EEEEcCCCceeEEeeccc
Q psy7482         253 TAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       253 ~i~d~~~~~~~~~~~~~~  270 (327)
                      +.||.++|+.+.+++...
T Consensus       510 ~A~D~~tG~~lW~~~~~~  527 (582)
T 1flg_A          510 KAFDAKSGKELWKFQTGS  527 (582)
T ss_dssp             EEEETTTCCEEEEEECSS
T ss_pred             EEEECCCCCEEEEecCCC
Confidence            999999999999988654

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.29  E-value=7e-09  Score=85.57  Aligned_cols=223  Identities=10%  Similarity=0.101  Sum_probs=142.1

Q ss_pred             cEEEEEcCC-----CeEEEeEEecccCCceeeEEE-----------e--cCCCEEEEE-eCCCCEEEEEcCCC----cee
Q psy7482          77 SIAIFRVGS-----WQLEKLFKKAHKGTAVNHISI-----------H--PSGKLALSV-GKDKTLRTWNLVKG----RSA  133 (327)
Q Consensus        77 ~i~iw~~~~-----~~~~~~~~~~~~~~~v~~~~~-----------~--~~~~~l~~~-~~dg~i~iwd~~~~----~~~  133 (327)
                      .|.+.|++.     ++.+..+.....+.+.....|           +  +++++|+.. ..++.|.++|+.+.    +..
T Consensus        44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~  123 (462)
T 2ece_A           44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKII  123 (462)
T ss_dssp             EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEE
T ss_pred             eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceee
Confidence            455666654     566666544443333455555           6  777776665 46789999998644    232


Q ss_pred             eeeecccc--CccccceEEEEEccCCcEEEeec-C------CeEEEEEecCCceeeEecCC----CceeEEEeecC-ceE
Q psy7482         134 YITNLSSY--GVGFENLDSVVWSPEGLLYAIPI-Q------NKAVVFSVEKAGVLQTLKSE----SKVHSVCFLNE-TTV  199 (327)
Q Consensus       134 ~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~------~~i~i~d~~~~~~~~~~~~~----~~i~~~~~~~~-~~l  199 (327)
                      ..+.....  .........+...|+| +++++. +      +.+.++|..+.+.+.++...    ..-..+-|+|+ +.+
T Consensus       124 k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~m  202 (462)
T 2ece_A          124 KVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVL  202 (462)
T ss_dssp             EEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEE
T ss_pred             eeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEE
Confidence            22210000  1112236678889999 555543 4      68999999999999998722    22345788998 666


Q ss_pred             EEeC-------------------CCCcEEEEEcCCCceeEEeeec--ccceEEEEEEecCCCcEEEEec------CCCeE
Q psy7482         200 CTGN-------------------EESAITAYNLTDGSHLWQIKAS--ASRIKGLVFFSIPQETTVCTGN------EESAI  252 (327)
Q Consensus       200 ~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~~~l~~~~------~d~~i  252 (327)
                      ++..                   ...+|.+||+.+++.+.++...  ......+.|..+|+++++.+++      .++.|
T Consensus       203 vsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V  282 (462)
T 2ece_A          203 VSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSI  282 (462)
T ss_dssp             EECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEE
T ss_pred             EEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceE
Confidence            6663                   3789999999998888877653  1334566663359999888776      45688


Q ss_pred             EEEEcCCCce--eEEe--ecc----------------cCceEEEeeeC--cEEEEEec-CCcEEEEEccCc
Q psy7482         253 TAYNLTDGSH--LWHI--KAS----------------ASRIKGLASHR--NHLICITS-AGDLVVWELNED  300 (327)
Q Consensus       253 ~i~d~~~~~~--~~~~--~~~----------------~~~v~~~~~~~--~~l~~~~~-dg~v~iw~~~~~  300 (327)
                      .+|....++.  ...+  ...                ......+.+++  ++|.++.. .+.|.+||+...
T Consensus       283 ~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~  353 (462)
T 2ece_A          283 WLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP  353 (462)
T ss_dssp             EEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred             EEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence            8877655431  1111  110                13467888998  66665554 678999999744

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.27  E-value=1.1e-08  Score=89.27  Aligned_cols=238  Identities=13%  Similarity=0.110  Sum_probs=152.5

Q ss_pred             EEEecCCCeEEEEEcccccccccccccc----ccEEE-EEECCCCCeEEEec------CCCcEEEEEcCCCeEEEeEEec
Q psy7482          27 AASSGADETVVLYDMVKRKQSGALMQHE----GTITC-LKFTPEGSHLISCS------DDGSIAIFRVGSWQLEKLFKKA   95 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~------~d~~i~iw~~~~~~~~~~~~~~   95 (327)
                      |+.++.|+.|..+|..+|+.+.......    ..+.+ .... ++ .+++++      .++.|+-+|.++|+.+..+...
T Consensus       124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~  201 (599)
T 1w6s_A          124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT  201 (599)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred             EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence            7788889999999999998876544221    01111 1111 34 455554      3799999999999988777332


Q ss_pred             ccCC-----------------------------------ce-eeEEEecCCCEEEEEeCC----------------CCEE
Q psy7482          96 HKGT-----------------------------------AV-NHISIHPSGKLALSVGKD----------------KTLR  123 (327)
Q Consensus        96 ~~~~-----------------------------------~v-~~~~~~~~~~~l~~~~~d----------------g~i~  123 (327)
                      ....                                   .+ ..+++.++..+++.+..+                +.|.
T Consensus       202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~  281 (599)
T 1w6s_A          202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF  281 (599)
T ss_dssp             SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred             CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence            1110                                   00 134666777778777655                3799


Q ss_pred             EEEcCCCceeeeeeccccCc-----cccceEEEEEc-cCC---cEEEeec-CCeEEEEEecCCceeeEecCCC-------
Q psy7482         124 TWNLVKGRSAYITNLSSYGV-----GFENLDSVVWS-PEG---LLYAIPI-QNKAVVFSVEKAGVLQTLKSES-------  186 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~-~~~---~~l~~~~-~~~i~i~d~~~~~~~~~~~~~~-------  186 (327)
                      .+|.++|+....+....+..     ...++ -+... .+|   ..++.++ +|.++++|.++++.+.......       
T Consensus       282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~  360 (599)
T 1w6s_A          282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS  360 (599)
T ss_dssp             EEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred             EEeCCCCceeeEeecCCCccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence            99999999988776654311     11112 12222 466   4566565 8999999999999887654211       


Q ss_pred             -------ce--------------------------eEEEeecC-ceEEEe------------------------------
Q psy7482         187 -------KV--------------------------HSVCFLNE-TTVCTG------------------------------  202 (327)
Q Consensus       187 -------~i--------------------------~~~~~~~~-~~l~~~------------------------------  202 (327)
                             ++                          ..++++|+ +++++.                              
T Consensus       361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~  440 (599)
T 1w6s_A          361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP  440 (599)
T ss_dssp             ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred             cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence                   11                          13456665 443321                              


Q ss_pred             ---C------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         203 ---N------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       203 ---~------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                         +      ..|.+..||+.+++.+.+.+... +...-...  ..+.+++.++.|+.++.||.++|+.+++++...
T Consensus       441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~--tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~  514 (599)
T 1w6s_A          441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF-AVWGGTMA--TAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS  514 (599)
T ss_dssp             CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS-CCCSBCEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             CCcCCcccCCCcCeEEEEECCCCCEEeEecCCC-CccCcceE--ecCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence               1      35789999999999888775321 22211111  356777779999999999999999999987554

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.24  E-value=2.4e-07  Score=84.27  Aligned_cols=278  Identities=12%  Similarity=0.033  Sum_probs=171.2

Q ss_pred             ccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccc-------cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482          15 ASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM-------QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        15 ~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      ..|.++.. ....|..|..+ -+.+||..+++......       .....|.++...++|. |..|+..+-|.++|..++
T Consensus       211 ~~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~  288 (781)
T 3v9f_A          211 NDVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQN  288 (781)
T ss_dssp             SSEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC
T ss_pred             CceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCC
Confidence            46888888 33334445545 58899987654332211       1245699998887775 555666456888998776


Q ss_pred             eEEEeEE-------e-----cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecc----ccCccccceEE
Q psy7482          87 QLEKLFK-------K-----AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS----SYGVGFENLDS  150 (327)
Q Consensus        87 ~~~~~~~-------~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~v~~  150 (327)
                      +......       .     .-....|.++...++|. |..|+.++-|..++..++.........    ........|.+
T Consensus       289 ~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~  367 (781)
T 3v9f_A          289 QFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSS  367 (781)
T ss_dssp             ---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEE
T ss_pred             eeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEE
Confidence            5432221       0     11122388888888776 566776777999998765433221110    11112345999


Q ss_pred             EEEccCCcEEEeecCCeEEEEEecCCceeeEe---c-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEee---
Q psy7482         151 VVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTL---K-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIK---  223 (327)
Q Consensus       151 ~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~---~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---  223 (327)
                      +...+++.+.+...++.+..||..+++.....   . ....|.++...+++.|.+|+.++-+..+|.++++.. .+.   
T Consensus       368 i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~  446 (781)
T 3v9f_A          368 VCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ-IIELEK  446 (781)
T ss_dssp             EEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE-ECCSTT
T ss_pred             EEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE-EeccCC
Confidence            99998888776665778999987655432211   1 346788888887888888888778999998766432 232   


Q ss_pred             ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc-----cCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482         224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS-----ASRIKGLASHR-NHLICITSAGDLVVWEL  297 (327)
Q Consensus       224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----~~~v~~~~~~~-~~l~~~~~dg~v~iw~~  297 (327)
                      .....|.++..  ++++.+.+ |+. +-|..+|..+++........     ...|.++...+ ..|..|+.++-|..|+.
T Consensus       447 ~~~~~v~~i~~--d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~  522 (781)
T 3v9f_A          447 NELLDVRVFYE--DKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTP  522 (781)
T ss_dssp             TCCCCEEEEEE--CTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECT
T ss_pred             CCCCeEEEEEE--CCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeC
Confidence            12356788776  35666544 444 56889998776543322222     35788888887 66777776555777877


Q ss_pred             cCc
Q psy7482         298 NED  300 (327)
Q Consensus       298 ~~~  300 (327)
                      ...
T Consensus       523 ~~~  525 (781)
T 3v9f_A          523 DMQ  525 (781)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.24  E-value=2e-08  Score=81.29  Aligned_cols=237  Identities=13%  Similarity=0.089  Sum_probs=147.3

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEec-------------------ccCCceeeEEEec-CCCEEEE
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA-------------------HKGTAVNHISIHP-SGKLALS  115 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------------------~~~~~v~~~~~~~-~~~~l~~  115 (327)
                      ...++++.+++++++++..++.|..|+..+++.. .+...                   .... +..+++.+ ++ .|+.
T Consensus        20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~-p~gi~~~~~~g-~l~v   96 (322)
T 2fp8_A           20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGR-TYDISYNLQNN-QLYI   96 (322)
T ss_dssp             CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCC-EEEEEEETTTT-EEEE
T ss_pred             CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCC-CceEEEcCCCC-cEEE
Confidence            3567889999988888888999999988765443 22110                   1123 78899997 55 4555


Q ss_pred             EeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEcc-CCcEEEeec------------------CCeEEEEEecCC
Q psy7482         116 VGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI------------------QNKAVVFSVEKA  176 (327)
Q Consensus       116 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~------------------~~~i~i~d~~~~  176 (327)
                      +...+.|..+|..+++....... ...........+++.+ +|+++++..                  ++.+..+|..++
T Consensus        97 ~d~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~  175 (322)
T 2fp8_A           97 VDCYYHLSVVGSEGGHATQLATS-VDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK  175 (322)
T ss_dssp             EETTTEEEEECTTCEECEEEESE-ETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred             EECCCCEEEEeCCCCEEEEeccc-CCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence            55555688888765543221111 1111112378899999 998777643                  267888888766


Q ss_pred             ceeeEecCCCceeEEEeecC-ceEE-EeCCCCcEEEEEcCCCc--eeEEeeecccceEEEEEEecCCCcEEEEecC----
Q psy7482         177 GVLQTLKSESKVHSVCFLNE-TTVC-TGNEESAITAYNLTDGS--HLWQIKASASRIKGLVFFSIPQETTVCTGNE----  248 (327)
Q Consensus       177 ~~~~~~~~~~~i~~~~~~~~-~~l~-~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~----  248 (327)
                      +.............++++|+ +.++ +-...+.|..|++....  ....+....+ ...+++  +++|++.++...    
T Consensus       176 ~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~--d~~G~l~va~~~~~~~  252 (322)
T 2fp8_A          176 ETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKR--NADGHFWVSSSEELDG  252 (322)
T ss_dssp             EEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEE--CTTSCEEEEEEEETTS
T ss_pred             EEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEE--CCCCCEEEEecCcccc
Confidence            64433333344567999998 5454 44667899999987421  1122221223 667777  488887666544    


Q ss_pred             ------CCeEEEEEcCCCceeEEeeccc----CceEEEeeeC-cEEEEEecCCcEEEEEccCc
Q psy7482         249 ------ESAITAYNLTDGSHLWHIKASA----SRIKGLASHR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       249 ------d~~i~i~d~~~~~~~~~~~~~~----~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                            .+.|..+|. +++.+..+....    ..+..+++.. .++++....+.|..+++...
T Consensus       253 ~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~  314 (322)
T 2fp8_A          253 NMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKK  314 (322)
T ss_dssp             STTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC---
T ss_pred             cccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecccc
Confidence                  467888886 477776665442    3466676666 45555556777888887655

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.23  E-value=1.4e-08  Score=88.56  Aligned_cols=272  Identities=11%  Similarity=0.084  Sum_probs=166.2

Q ss_pred             CCEEEEecCCCeEEEEEccccccccccccccccE---------EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTI---------TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v---------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      +..++.++.++.|.-+|..+|+.+..+.......         ..+++  .+..++.++.|+.|.-+|.++|+.+.....
T Consensus        68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~  145 (582)
T 1flg_A           68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF  145 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred             CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence            3444444443449999999998877665322110         11222  255788888899999999999998877633


Q ss_pred             cccC--Ccee-eEEEec---CCC-EEEEEe------CCCCEEEEEcCCCceeeeeeccccCc------------------
Q psy7482          95 AHKG--TAVN-HISIHP---SGK-LALSVG------KDKTLRTWNLVKGRSAYITNLSSYGV------------------  143 (327)
Q Consensus        95 ~~~~--~~v~-~~~~~~---~~~-~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~------------------  143 (327)
                      ....  ..+. ......   +++ .+++++      .+|.|..+|.++|+.+..........                  
T Consensus       146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~  225 (582)
T 1flg_A          146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS  225 (582)
T ss_dssp             SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred             CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence            2210  0011 111222   233 566554      37899999999999887654321000                  


Q ss_pred             ------------------cccceEEEEEccCCcEEEeec---------------------C----CeEEEEEecCCceee
Q psy7482         144 ------------------GFENLDSVVWSPEGLLYAIPI---------------------Q----NKAVVFSVEKAGVLQ  180 (327)
Q Consensus       144 ------------------~~~~v~~~~~~~~~~~l~~~~---------------------~----~~i~i~d~~~~~~~~  180 (327)
                                        ....-..++++|+..++.++.                     |    +.|..+|.++++.+.
T Consensus       226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W  305 (582)
T 1flg_A          226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW  305 (582)
T ss_dssp             SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred             CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence                              000012355666666555443                     1    589999999999998


Q ss_pred             EecC--CC--------ceeEEEee-cCc----eEEEeCCCCcEEEEEcCCCceeEEeeecc-------------cce---
Q psy7482         181 TLKS--ES--------KVHSVCFL-NET----TVCTGNEESAITAYNLTDGSHLWQIKASA-------------SRI---  229 (327)
Q Consensus       181 ~~~~--~~--------~i~~~~~~-~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v---  229 (327)
                      .++.  ..        ...-+... .++    .++.++.+|.++++|.++++.+..++...             .++   
T Consensus       306 ~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~  385 (582)
T 1flg_A          306 FYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVERE  385 (582)
T ss_dssp             EEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECT
T ss_pred             EEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEcc
Confidence            8762  11        11112221 232    67889999999999999999887665332             000   


Q ss_pred             -----------------------------EEEEEEecCCCcEEEEe---------------------------------c
Q psy7482         230 -----------------------------KGLVFFSIPQETTVCTG---------------------------------N  247 (327)
Q Consensus       230 -----------------------------~~~~~~~s~~~~~l~~~---------------------------------~  247 (327)
                                                   ..+++  +|+..++++.                                 .
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~--dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~  463 (582)
T 1flg_A          386 GQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAY--SQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD  463 (582)
T ss_dssp             TCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEE--CTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred             ccCCccccccccCCCceEECcCCccccCCCCceE--CCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence                                         01233  2333343332                                 1


Q ss_pred             CCCeEEEEEcCCCceeEEeecccCceEE--EeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         248 EESAITAYNLTDGSHLWHIKASASRIKG--LASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       248 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+|.|..||+.+++.+++..... ++..  +.....+++.++.||.++.||..++
T Consensus       464 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG  517 (582)
T 1flg_A          464 HVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSG  517 (582)
T ss_dssp             CSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             CcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence            36889999999999998877543 2222  2223378888999999999999988

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.21  E-value=6.6e-07  Score=81.44  Aligned_cols=279  Identities=9%  Similarity=0.067  Sum_probs=172.5

Q ss_pred             ccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccc-------cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482          15 ASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM-------QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        15 ~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      ..|.++.. ....|..|..++-|..||..+++......       .....|.++...+++.+.+ |+.+ -+.+||..++
T Consensus       163 ~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~-Gl~~~d~~~~  240 (781)
T 3v9f_A          163 EQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GTSK-GLALFNANTE  240 (781)
T ss_dssp             CCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EETT-EEEEEETTTT
T ss_pred             cceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-EeCC-cHheECCCCC
Confidence            45788877 35555556666568889977654322110       1235689998888876554 4445 5899998776


Q ss_pred             eEEEeEEec-----ccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeee-------cc--ccCccccceEEEE
Q psy7482          87 QLEKLFKKA-----HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN-------LS--SYGVGFENLDSVV  152 (327)
Q Consensus        87 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~--~~~~~~~~v~~~~  152 (327)
                      +........     .....|.++...++|. |..|+..+-|.++|..+++......       ..  ........|.++.
T Consensus       241 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~  319 (781)
T 3v9f_A          241 TFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIF  319 (781)
T ss_dssp             EEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEE
T ss_pred             cEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEE
Confidence            554322110     1122388888877775 5556665669999987665432211       00  1122234599999


Q ss_pred             EccCCcEEEeecCCeEEEEEecCCceeeEe-------c---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482         153 WSPEGLLYAIPIQNKAVVFSVEKAGVLQTL-------K---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       153 ~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~-------~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  222 (327)
                      ..++|.+.+...++.|..++..........       .   ....|.++...+++.+.+|+.++-+..||..++......
T Consensus       320 ~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~  399 (781)
T 3v9f_A          320 QDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNK  399 (781)
T ss_dssp             ECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-
T ss_pred             EeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEcc
Confidence            999998777666888999987755432211       1   235688898888888889987778999997654322111


Q ss_pred             ---eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee--cccCceEEEeeeC-cEEEEEecCCcEEEEE
Q psy7482         223 ---KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK--ASASRIKGLASHR-NHLICITSAGDLVVWE  296 (327)
Q Consensus       223 ---~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~  296 (327)
                         ......|.++..  ++++. |..|+.++-+..+|..+++......  .....|.++...+ ..|..|+. +-|..++
T Consensus       400 ~~~~~~~~~v~~i~~--d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~  475 (781)
T 3v9f_A          400 ENRELLSNSVLCSLK--DSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVID  475 (781)
T ss_dssp             ----CCCSBEEEEEE--CTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEE
T ss_pred             CCCCCCCcceEEEEE--CCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEe
Confidence               122356778776  24555 4456666779999987765332211  1345788888887 66777776 5588888


Q ss_pred             ccCc
Q psy7482         297 LNED  300 (327)
Q Consensus       297 ~~~~  300 (327)
                      ...+
T Consensus       476 ~~~~  479 (781)
T 3v9f_A          476 LASK  479 (781)
T ss_dssp             SSSS
T ss_pred             CCCC
Confidence            7765

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=99.11  E-value=7.3e-07  Score=73.94  Aligned_cols=242  Identities=9%  Similarity=-0.021  Sum_probs=150.0

Q ss_pred             CEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccCCceee
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH  103 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~  103 (327)
                      .+|+.+. ...|+..++........+. ....+..++|.+.+..|+ +-...+.|..++.........+ ...... ...
T Consensus        88 ~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~~~~~~-p~g  163 (386)
T 3v65_B           88 PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-STGLES-PGG  163 (386)
T ss_dssp             CEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE-CSSCSC-CCC
T ss_pred             ceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE-eCCCCC-ccE
Confidence            3444444 3568888887655433333 334578999997655554 5456788999998766544433 323333 678


Q ss_pred             EEEecCCCEEE-EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-CeEEEEEecCCcee
Q psy7482         104 ISIHPSGKLAL-SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-NKAVVFSVEKAGVL  179 (327)
Q Consensus       104 ~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-~~i~i~d~~~~~~~  179 (327)
                      +++.+.+..|+ +-...+.|.+.++......... ...    ......++++|.+..|..+.  . +.|..+++......
T Consensus       164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~-~~~----l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~  238 (386)
T 3v65_B          164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQS----LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR  238 (386)
T ss_dssp             EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE-CSS----CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred             EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee-cCC----CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE
Confidence            89998555554 4445678888887644322222 111    12378999998766555543  4 78888887654433


Q ss_pred             eEec-CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482         180 QTLK-SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       180 ~~~~-~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                      .... .-.....++++|+ + ++++-...+.|..+|+........+.........+++   ..+.++++-...+.|..++
T Consensus       239 ~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav---~~~~ly~td~~~~~V~~~~  315 (386)
T 3v65_B          239 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV---FEDSLYWTDWHTKSINSAN  315 (386)
T ss_dssp             EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE---ETTEEEEEETTTTEEEEEE
T ss_pred             EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE---ECCEEEEeeCCCCeEEEEE
Confidence            3333 3456789999976 4 4555567788999998644333233333345667777   3566777777788899999


Q ss_pred             cCCCceeEEeecccCceEEEee
Q psy7482         257 LTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      ..+++.+..+........++++
T Consensus       316 ~~~G~~~~~i~~~~~~p~gi~v  337 (386)
T 3v65_B          316 KFTGKNQEIIRNKLHFPMDIHT  337 (386)
T ss_dssp             TTTCCSCEEEECSCSCCCCEEE
T ss_pred             CCCCcceEEEccCCCCCceEEE
Confidence            7777766666544344455544

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=99.10  E-value=1.3e-06  Score=71.45  Aligned_cols=250  Identities=9%  Similarity=-0.024  Sum_probs=150.8

Q ss_pred             EEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      ..|.+. ...+|+.+. ...|+..++........+.. ...+..++|.+.+..|+ +-...+.|..++.........+ .
T Consensus        36 ~~C~~~~~~~~ll~~~-~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~  112 (349)
T 3v64_C           36 RSCKALGPEPVLLFAN-RIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-S  112 (349)
T ss_dssp             SCEEESSSCCEEEEEC-BSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-C
T ss_pred             CcccccccCceeEeec-ccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE-e
Confidence            345554 334444443 34577778765443333332 34478999997655555 4456788999998765544433 2


Q ss_pred             cccCCceeeEEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-CeEEE
Q psy7482          95 AHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-NKAVV  170 (327)
Q Consensus        95 ~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-~~i~i  170 (327)
                      ..... ...+++.+.+..| ++-...+.|.+.+++........ ...    ......++++|.+..+..+.  . +.|..
T Consensus       113 ~~~~~-p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~----l~~P~~iavdp~~g~ly~td~~~~~~I~r  186 (349)
T 3v64_C          113 TGLES-PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQS----LEKPRAIALHPMEGTIYWTDWGNTPRIEA  186 (349)
T ss_dssp             SSCSC-CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CTT----CSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred             CCCCC-ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE-eCC----CCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence            23334 6789999855555 44455678999998654322222 111    12378999999665555443  4 78888


Q ss_pred             EEecCCceeeEec-CCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec
Q psy7482         171 FSVEKAGVLQTLK-SESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN  247 (327)
Q Consensus       171 ~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~  247 (327)
                      +++.......... .-.....++++|+ +. +++-...+.|..+|+........+.........+++   .++..+++-.
T Consensus       187 ~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav---~~~~ly~td~  263 (349)
T 3v64_C          187 SSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV---FEDSLYWTDW  263 (349)
T ss_dssp             EETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE---ETTEEEEEET
T ss_pred             EeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE---ECCEEEEecC
Confidence            8876443322222 3456789999985 54 455566788999998644332223333345667777   3566677777


Q ss_pred             CCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482         248 EESAITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       248 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      ..+.|..++..+++.+..+........++++
T Consensus       264 ~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v  294 (349)
T 3v64_C          264 HTKSINSANKFTGKNQEIIRNKLHFPMDIHT  294 (349)
T ss_dssp             TTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred             CCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence            7788999887777766665543334444443

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.07  E-value=1.7e-06  Score=69.40  Aligned_cols=227  Identities=10%  Similarity=0.050  Sum_probs=131.9

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC--CcEEEEEcCCCeEEE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD--GSIAIFRVGSWQLEK   90 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~iw~~~~~~~~~   90 (327)
                      .....+++  +++++++-..++.|..||.... ....+. .......+++.++++++++....  ..|..++..+++...
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~  109 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET  109 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence            45667888  6777777767899999997643 322222 23568899999999866654332  246677777777654


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeee-eec--c--ccCccccceEEEEEccCCcEEEeec-
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI-TNL--S--SYGVGFENLDSVVWSPEGLLYAIPI-  164 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~--~--~~~~~~~~v~~~~~~~~~~~l~~~~-  164 (327)
                      ......... ...++..+++..+++-..++.|..+|..+++.... ...  .  ...........+  +|+++.+.++. 
T Consensus       110 ~~~~~~~~~-~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~  186 (306)
T 2p4o_A          110 LLTLPDAIF-LNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT  186 (306)
T ss_dssp             EEECTTCSC-EEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred             EEeCCCccc-cCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence            332222222 44555555554444444578899999765432111 000  0  000011124555  78887665554 


Q ss_pred             -CCeEEEEEecC-Cce--eeEecCCCceeEEEeecCc-eEEEeCCCCcEEEEEcCCCceeE--EeeecccceEEEEEEec
Q psy7482         165 -QNKAVVFSVEK-AGV--LQTLKSESKVHSVCFLNET-TVCTGNEESAITAYNLTDGSHLW--QIKASASRIKGLVFFSI  237 (327)
Q Consensus       165 -~~~i~i~d~~~-~~~--~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~s  237 (327)
                       .+.|..|++.. ++.  ...+........+++++++ ++++....+.|.++|.. ++...  .+.......++++|. .
T Consensus       187 ~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~-g  264 (306)
T 2p4o_A          187 EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG-Q  264 (306)
T ss_dssp             TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC-C
T ss_pred             CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEe-c
Confidence             78999999874 321  1222222456778899984 44555567889999975 55422  233333457888883 1


Q ss_pred             --CCCcEEEEecC
Q psy7482         238 --PQETTVCTGNE  248 (327)
Q Consensus       238 --~~~~~l~~~~~  248 (327)
                        ++++.|+..+.
T Consensus       265 ~~~d~~~LyVt~~  277 (306)
T 2p4o_A          265 TEGDCTAIYVVTN  277 (306)
T ss_dssp             STTTTTEEEEEEC
T ss_pred             ccCCCCEEEEECC
Confidence              56666555443

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.00  E-value=3.4e-06  Score=67.60  Aligned_cols=221  Identities=9%  Similarity=0.053  Sum_probs=134.8

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCce
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRS  132 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~  132 (327)
                      .....++|.++++++++-..++.|..||... +....+ . .... +..+++.++++++++.....  .|..+|..+++.
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~-~-~~~~-p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~  107 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHA-T-VEGK-VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV  107 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEE-E-CSSE-EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEE-e-CCCC-ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence            4577899999998777776788999998775 333333 1 2233 88999999998665544332  366777777765


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCce-eeEe-------c---CCCceeEEEeecC-c-e
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGV-LQTL-------K---SESKVHSVCFLNE-T-T  198 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~-~~~~-------~---~~~~i~~~~~~~~-~-~  198 (327)
                      .........    .....++..+++..+++.. ++.|+.+|...++. +...       .   .-.....+  +++ + +
T Consensus       108 ~~~~~~~~~----~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l  181 (306)
T 2p4o_A          108 ETLLTLPDA----IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL  181 (306)
T ss_dssp             EEEEECTTC----SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred             EEEEeCCCc----cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence            443333221    1134455556665555554 78999999765421 1110       0   11234555  666 4 4


Q ss_pred             EEEeCCCCcEEEEEcCC-Cce--eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE--EeecccCce
Q psy7482         199 VCTGNEESAITAYNLTD-GSH--LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW--HIKASASRI  273 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v  273 (327)
                      +++-...+.|..|++.. ++.  ...+.. ......+++  +++|+++++....+.|.++|.. ++...  .+.......
T Consensus       182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~v--d~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p  257 (306)
T 2p4o_A          182 YVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAF--DVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGS  257 (306)
T ss_dssp             EEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEE--BTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTE
T ss_pred             EEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEE--CCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCc
Confidence            55666788999999874 321  111211 123566777  4889887777778899999975 65422  333333467


Q ss_pred             EEEeee---C--cEEEEEecC
Q psy7482         274 KGLASH---R--NHLICITSA  289 (327)
Q Consensus       274 ~~~~~~---~--~~l~~~~~d  289 (327)
                      ++++|.   +  +.|+.++..
T Consensus       258 ~~~a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          258 TAVAFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             EEEEECCSTTTTTEEEEEECT
T ss_pred             eEEEEecccCCCCEEEEECCC
Confidence            888887   5  455544443

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.98  E-value=3.4e-07  Score=81.51  Aligned_cols=230  Identities=9%  Similarity=0.058  Sum_probs=132.4

Q ss_pred             CCCEEEEecCCC-----------eEEEEEccccccccc--cc-cccccEEEEEECCCCCeEEEecC-CCcEEEEEcCCCe
Q psy7482          23 TSKLAASSGADE-----------TVVLYDMVKRKQSGA--LM-QHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQ   87 (327)
Q Consensus        23 ~~~~l~~~~~dg-----------~v~~w~~~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~~~~   87 (327)
                      ++++++.|+.+.           .+.+||..+++....  +. .+.....++++.++++.++.|+. +..+.+||..+.+
T Consensus       197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~  276 (656)
T 1k3i_A          197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS  276 (656)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred             CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence            778888887543           588999988764322  21 12233345677889999999984 4589999998765


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEe-CC-----CCEEEEEcCCCceeeee-----eccccCccccceEEEEEccC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVG-KD-----KTLRTWNLVKGRSAYIT-----NLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~  156 (327)
                      ....- .......-.++...+++++++.|+ .+     ..+.+||..+.+.....     +......      ...+..+
T Consensus       277 W~~~~-~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~------~~~~~~~  349 (656)
T 1k3i_A          277 WIPGP-DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADK------QGLYRSD  349 (656)
T ss_dssp             EEECC-CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCT------TGGGTTT
T ss_pred             eeECC-CCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccc------cceeecC
Confidence            44332 212222123455667899999988 34     56999999887654321     1111100      0112233


Q ss_pred             CcEEEee----------cCCeEEEEEecCCceeeEecCC----------CceeEEEeec-C-ceEEEeCCCC--------
Q psy7482         157 GLLYAIP----------IQNKAVVFSVEKAGVLQTLKSE----------SKVHSVCFLN-E-TTVCTGNEES--------  206 (327)
Q Consensus       157 ~~~l~~~----------~~~~i~i~d~~~~~~~~~~~~~----------~~i~~~~~~~-~-~~l~~~~~d~--------  206 (327)
                      +..++.+          ....+..||..+..........          ..-.++.+.. + .+++.|+.++        
T Consensus       350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~  429 (656)
T 1k3i_A          350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT  429 (656)
T ss_dssp             CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred             CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence            4433333          2356788888876644333211          1223444433 3 6677776432        


Q ss_pred             ---cEEEEEcCCCceeEEe--eecccce-EEEEEEecCCCcEEEEecCC-----------CeEEEEEcCCCc
Q psy7482         207 ---AITAYNLTDGSHLWQI--KASASRI-KGLVFFSIPQETTVCTGNEE-----------SAITAYNLTDGS  261 (327)
Q Consensus       207 ---~i~i~d~~~~~~~~~~--~~~~~~v-~~~~~~~s~~~~~l~~~~~d-----------~~i~i~d~~~~~  261 (327)
                         .+.+||..+.+-....  ..+.... .+++.  .++++.++.|+.+           ..+.+||..+.+
T Consensus       430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~--l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~  499 (656)
T 1k3i_A          430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVV--LPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT  499 (656)
T ss_dssp             CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEE--CTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred             cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEE--CCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence               5778887765433222  1122222 22233  2799999999864           468999987765

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.96  E-value=4.4e-06  Score=67.18  Aligned_cols=242  Identities=11%  Similarity=0.040  Sum_probs=144.5

Q ss_pred             EEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecccCCceee
Q psy7482          26 LAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH  103 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~  103 (327)
                      +|+.+. ...|+..++....... .+........+++|.+.+..| ++-...+.|..++.........+....... ...
T Consensus         6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~-p~g   83 (318)
T 3sov_A            6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS-PDG   83 (318)
T ss_dssp             EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSC-CCE
T ss_pred             EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCC-ccE
Confidence            344433 4678889987653111 121223456789999854444 555567889999987653222221222233 678


Q ss_pred             EEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCCcee
Q psy7482         104 ISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVL  179 (327)
Q Consensus       104 ~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~  179 (327)
                      +++.+.+..| ++-...+.|.+++++........ ...    ......+++.|.+..+..+.   .+.|..+++......
T Consensus        84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~----~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~  158 (318)
T 3sov_A           84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF-WQE----LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF  158 (318)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSS----CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred             EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE-eCC----CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE
Confidence            8998755444 44455678999998654322221 111    22378999998655544443   478888887643332


Q ss_pred             eEec-CCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482         180 QTLK-SESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       180 ~~~~-~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                      .... .-.....++++++ +. +++-...+.|..+|+..................+++.   .+.++.+-...+.|..++
T Consensus       159 ~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~---~~~lywtd~~~~~V~~~~  235 (318)
T 3sov_A          159 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF---EDILYWTDWSTHSILACN  235 (318)
T ss_dssp             EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE---TTEEEEEETTTTEEEEEE
T ss_pred             EEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe---CCEEEEEecCCCeEEEEE
Confidence            2222 3356789999985 54 4555677889999986433222222233445677773   456666766778999999


Q ss_pred             cCCCceeEEeecccCceEEEe
Q psy7482         257 LTDGSHLWHIKASASRIKGLA  277 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~  277 (327)
                      ..+++....+........+++
T Consensus       236 ~~~G~~~~~i~~~~~~P~~i~  256 (318)
T 3sov_A          236 KYTGEGLREIHSDIFSPMDIH  256 (318)
T ss_dssp             TTTCCSCEEEECCCSSCCCEE
T ss_pred             CCCCCceEEEeCCCCCCcEEE
Confidence            888876666654333344444

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.91  E-value=1.2e-05  Score=64.96  Aligned_cols=268  Identities=10%  Similarity=0.046  Sum_probs=146.7

Q ss_pred             CccEEEEEe-C-CCEEEEecCCCeEEEEEccccccccc--c--ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          14 TASVRSVAA-T-SKLAASSGADETVVLYDMVKRKQSGA--L--MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        14 ~~~v~~~~~-~-~~~l~~~~~dg~v~~w~~~~~~~~~~--~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      ...+.++.| + +..++ ++.+|.|. .....++.-..  .  ......+.++.|.+ +..++ ++..+.|.. ..+.++
T Consensus        35 ~~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~  109 (327)
T 2xbg_A           35 TATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ  109 (327)
T ss_dssp             SSCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS
T ss_pred             CCcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC
Confidence            457999999 4 45555 45577653 33333321111  1  12345688999986 44444 455664433 223333


Q ss_pred             EEEeEEe--cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482          88 LEKLFKK--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ  165 (327)
Q Consensus        88 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  165 (327)
                      .-.....  ..... +..+.+.+++..++.+ .+|.|..- .+.++.-.......    ...+..+.+.|++.+++++.+
T Consensus       110 tW~~~~~~~~~~~~-~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~----~~~~~~~~~~~~~~~~~~g~~  182 (327)
T 2xbg_A          110 SWSQIPLDPKLPGS-PRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEA----IGVMRNLNRSPSGEYVAVSSR  182 (327)
T ss_dssp             SCEECCCCTTCSSC-EEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSC----CCCEEEEEECTTSCEEEEETT
T ss_pred             CceECccccCCCCC-eEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCC----CcceEEEEEcCCCcEEEEECC
Confidence            2222211  12234 6778877776655544 45654321 22343322222211    123888999999999988876


Q ss_pred             CeEEEEEecCCceeeEe--cCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee----cccceEEEEEEecCC
Q psy7482         166 NKAVVFSVEKAGVLQTL--KSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA----SASRIKGLVFFSIPQ  239 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~s~~  239 (327)
                      +.+..-+-..++.-..+  .....+..+.+.+++.++.++.+|.+++.+...++.-..+..    +...+..+.+.  ++
T Consensus       183 G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~--~~  260 (327)
T 2xbg_A          183 GSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR--TP  260 (327)
T ss_dssp             SSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES--SS
T ss_pred             CcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEec--CC
Confidence            66554332113322222  245678888898886666777788877764222332222221    22347788874  66


Q ss_pred             CcEEEEecCCCeEEEEEcCCCceeEEeec---ccCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482         240 ETTVCTGNEESAITAYNLTDGSHLWHIKA---SASRIKGLASHR-NHLICITSAGDLVVWEL  297 (327)
Q Consensus       240 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~  297 (327)
                      +..++++. ++.+ .+..+.++.-..+..   ....+.++.|.+ ..+++++.+|.|.-++-
T Consensus       261 ~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~  320 (327)
T 2xbg_A          261 NEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT  320 (327)
T ss_dssp             SCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred             CEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence            77666665 5666 344444543333332   235678888865 77778888997766553

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.90  E-value=6.2e-06  Score=67.34  Aligned_cols=213  Identities=7%  Similarity=-0.041  Sum_probs=131.6

Q ss_pred             cEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          16 SVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        16 ~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .+..++|   ++.++++-...+.|..+++........+.........+++.+.+. +.++-...+.|.+.+++.... ..
T Consensus        74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~  152 (349)
T 3v64_C           74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KV  152 (349)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EE
T ss_pred             ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EE
Confidence            3567777   344555555678888888875543332322223456788887544 445556677899999875433 33


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeC-C-CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCe
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGK-D-KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNK  167 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~  167 (327)
                      +....... ...+++.|.+..|+.... . +.|..+++...... .+....    ......++++|++..|..+.  .+.
T Consensus       153 l~~~~l~~-P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~~~~~----~~~PnGla~d~~~~~lY~aD~~~~~  226 (349)
T 3v64_C          153 LLWQSLEK-PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-IIADTH----LFWPNGLTIDYAGRRMYWVDAKHHV  226 (349)
T ss_dssp             EECTTCSC-EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-ESCCSS----CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred             EEeCCCCC-cceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-EEEECC----CCCcceEEEeCCCCEEEEEECCCCE
Confidence            31333344 789999996665555543 3 67888887643222 211111    22378999998776665553  688


Q ss_pred             EEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         168 AVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       168 i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                      |..+|+........+. .......+++..+..+++-...+.|..++..+++....+.........+++.
T Consensus       227 I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~  295 (349)
T 3v64_C          227 IERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTL  295 (349)
T ss_dssp             EEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEE
T ss_pred             EEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEEE
Confidence            9999987544333333 3456778888555677777788889988877777666665443444555554

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.88  E-value=1.4e-05  Score=64.23  Aligned_cols=230  Identities=8%  Similarity=-0.029  Sum_probs=140.4

Q ss_pred             EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCC---CeEEEeEEecccCCce
Q psy7482          26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGS---WQLEKLFKKAHKGTAV  101 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~---~~~~~~~~~~~~~~~v  101 (327)
                      +|+.+. ...|+..|+...+....+. ....+..++|.+++..|+ +-..++.|..+++..   +.....+....... .
T Consensus         3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~-p   79 (316)
T 1ijq_A            3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA-P   79 (316)
T ss_dssp             EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC-C
T ss_pred             EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC-c
Confidence            344444 3458888988766544443 344578999998665554 555568899999875   12222221222234 6


Q ss_pred             eeEEEecCCCEEE-EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c-C-CeEEEEEecCCc
Q psy7482         102 NHISIHPSGKLAL-SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-Q-NKAVVFSVEKAG  177 (327)
Q Consensus       102 ~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~-~~i~i~d~~~~~  177 (327)
                      ..+++.+.+..|+ +-...+.|.+.++........... .    ......++++|.+..+..+ . . +.|..+++... 
T Consensus        80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~----~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-  153 (316)
T 1ijq_A           80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-N----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-  153 (316)
T ss_dssp             CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-T----TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-
T ss_pred             CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC-C----CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-
Confidence            8899987555554 445678899999875433222221 1    1237899999866544444 3 3 68888887543 


Q ss_pred             eeeEe-c-CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeee---cccceEEEEEEecCCCcEEEEecCCC
Q psy7482         178 VLQTL-K-SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKA---SASRIKGLVFFSIPQETTVCTGNEES  250 (327)
Q Consensus       178 ~~~~~-~-~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~s~~~~~l~~~~~d~  250 (327)
                      ....+ . .-.....++++++ +.| ++-...+.|..+|+... ....+..   .......+++   ..+.++++-...+
T Consensus       154 ~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav---~~~~ly~~d~~~~  229 (316)
T 1ijq_A          154 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAV---FEDKVFWTDIINE  229 (316)
T ss_dssp             CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEE---ETTEEEEEETTTT
T ss_pred             CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEE---ECCEEEEEECCCC
Confidence            33333 2 3456889999986 554 55566789999998643 3333321   1234567777   3466777777788


Q ss_pred             eEEEEEcCCCceeEEeec
Q psy7482         251 AITAYNLTDGSHLWHIKA  268 (327)
Q Consensus       251 ~i~i~d~~~~~~~~~~~~  268 (327)
                      .|..++..+++.+..+..
T Consensus       230 ~V~~~~~~~g~~~~~i~~  247 (316)
T 1ijq_A          230 AIFSANRLTGSDVNLLAE  247 (316)
T ss_dssp             EEEEEETTTCCCCEEEEC
T ss_pred             eEEEEeCCCCcceEEEec
Confidence            999999877776665543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.88  E-value=3.3e-06  Score=70.00  Aligned_cols=213  Identities=7%  Similarity=-0.039  Sum_probs=132.1

Q ss_pred             cEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          16 SVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        16 ~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      .+..++|   ++.++++-...+.|..+++........+.........+++.+.+. +.++-...+.|.+.++........
T Consensus       117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l  196 (386)
T 3v65_B          117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL  196 (386)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEE
T ss_pred             ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEe
Confidence            4566777   344555556678888888875543333322223456788887544 445555567888888764433322


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeC-C-CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCe
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGK-D-KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNK  167 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~  167 (327)
                      + ...... ...+++.|.+..|+.+.. . +.|..+++......... ...    ......++++|++..|..+.  .+.
T Consensus       197 ~-~~~l~~-P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~----~~~PnGlavd~~~~~lY~aD~~~~~  269 (386)
T 3v65_B          197 L-WQSLEK-PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DTH----LFWPNGLTIDYAGRRMYWVDAKHHV  269 (386)
T ss_dssp             E-CSSCSC-EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSS----CSCEEEEEEEGGGTEEEEEETTTTE
T ss_pred             e-cCCCCC-CcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE-ECC----CCCeeeEEEeCCCCEEEEEECCCCE
Confidence            3 333344 789999987666665543 3 67888887643322221 111    12378999998766555553  788


Q ss_pred             EEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         168 AVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       168 i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                      |..+|+........+. .......+++..+..+++....+.|..++..+++.+..+.........+++.
T Consensus       270 I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~  338 (386)
T 3v65_B          270 IERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTL  338 (386)
T ss_dssp             EEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEE
T ss_pred             EEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEEE
Confidence            9999986544333333 3456778888655777787888899999977777766665444445555554

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.87  E-value=1.1e-05  Score=62.11  Aligned_cols=202  Identities=12%  Similarity=0.158  Sum_probs=129.6

Q ss_pred             cccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcC
Q psy7482          50 LMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV  128 (327)
Q Consensus        50 ~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  128 (327)
                      +.+-...+..++|.|++..|+ +...++.|...|.. ++....+....... .-.+++.+++.++++.-.++.+.++++.
T Consensus        22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D-~EGIa~~~~g~~~vs~E~~~~l~~~~v~   99 (255)
T 3qqz_A           22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKD-LETIEYIGDNQFVISDERDYAIYVISLT   99 (255)
T ss_dssp             CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSS-EEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred             CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCC-hHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence            445556799999999766555 56778889999998 88888774433344 7889999888776766567889999876


Q ss_pred             CCce---eeeeeccc-cCccccceEEEEEccCCcEEEeec-CCeEEEEEecC---CceeeEec--------CCCceeEEE
Q psy7482         129 KGRS---AYITNLSS-YGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEK---AGVLQTLK--------SESKVHSVC  192 (327)
Q Consensus       129 ~~~~---~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~---~~~~~~~~--------~~~~i~~~~  192 (327)
                      ....   .....+.. ..........++|+|.++.|.++. .....+|....   ...+..+.        ....+.+++
T Consensus       100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~  179 (255)
T 3qqz_A          100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE  179 (255)
T ss_dssp             TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred             CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence            5442   12222211 111233478999999986665554 33334444431   11122221        234578999


Q ss_pred             eecC--ceEEEeCCCCcEEEEEcCCCceeEEeeecc---------cceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         193 FLNE--TTVCTGNEESAITAYNLTDGSHLWQIKASA---------SRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       193 ~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      ++|.  .+++.......+..+|.. ++.+..+.-..         .....|+|  +++|+..++ ++.+.++.|.-
T Consensus       180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~--d~~G~lyIv-sE~n~~y~f~~  251 (255)
T 3qqz_A          180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAM--DASGNIYIV-SEPNRFYRFTP  251 (255)
T ss_dssp             EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEE--CTTCCEEEE-ETTTEEEEEEC
T ss_pred             EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEE--CCCCCEEEE-cCCceEEEEEe
Confidence            9997  466777788889999965 55655543221         25678999  488875444 66677777654

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.86  E-value=2.8e-06  Score=76.81  Aligned_cols=192  Identities=13%  Similarity=0.047  Sum_probs=113.0

Q ss_pred             cEEEEEEC-CCCCeEEEecC-C----CcEEEEEcCCC-eEEEe-EEecccCCceeeEEEecCCCEEEEEeCC-----CCE
Q psy7482          56 TITCLKFT-PEGSHLISCSD-D----GSIAIFRVGSW-QLEKL-FKKAHKGTAVNHISIHPSGKLALSVGKD-----KTL  122 (327)
Q Consensus        56 ~v~~~~~~-~~~~~l~~~~~-d----~~i~iw~~~~~-~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i  122 (327)
                      .+...+|| |||++||.+.. +    ..|+++|+.++ +.+.. + .   .. ...+.|+||++.|+....+     ..|
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~-~---~~-~~~~~WspDg~~l~y~~~d~~~~~~~v  249 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV-S---GT-NGEIVWGPDHTSLFYVTKDETLRENKV  249 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE-E---EE-CSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc-c---Cc-eeeEEEecCCCEEEEEEECCCCCCCEE
Confidence            67889999 99998885432 2    35999999988 63221 2 1   11 3467899999888877665     257


Q ss_pred             EEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec----CCeEEEEEecCCc-ee--eEec--CCCceeEEEe
Q psy7482         123 RTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNKAVVFSVEKAG-VL--QTLK--SESKVHSVCF  193 (327)
Q Consensus       123 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~i~i~d~~~~~-~~--~~~~--~~~~i~~~~~  193 (327)
                      ..+++.++............  ......+.|+|||++|+...    ...|+++|+.++. ..  ..+.  ......++.|
T Consensus       250 ~~~~lgt~~~~~~lv~~~~~--~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~  327 (751)
T 2xe4_A          250 WRHVMGKLQSEDVCLYEEHN--PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM  327 (751)
T ss_dssp             EEEETTSCGGGCEEEEECCC--TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred             EEEECCCCchhcEEEEecCC--CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence            88888776432111111110  11256789999999887654    3578889988752 22  3332  3344556665


Q ss_pred             ecCceE-EEeCCC----CcEEEEEcCCCceeEE-eeeccc--ceEEEEEEecCCCcEEEEecCCCe--EEEEEc
Q psy7482         194 LNETTV-CTGNEE----SAITAYNLTDGSHLWQ-IKASAS--RIKGLVFFSIPQETTVCTGNEESA--ITAYNL  257 (327)
Q Consensus       194 ~~~~~l-~~~~~d----~~i~i~d~~~~~~~~~-~~~~~~--~v~~~~~~~s~~~~~l~~~~~d~~--i~i~d~  257 (327)
                      +.++.| +....+    ..|..+|+.+...... +-.+..  .+..+.+   ..+.++++...++.  |.++++
T Consensus       328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~---~~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV---RSNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE---CSSEEEEEEEETTEEEEEEEEC
T ss_pred             eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE---ECCEEEEEEEeCCEEEEEEEec
Confidence            555444 443333    3566677664222222 222322  3445554   34556667777775  555665

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.86  E-value=2.4e-05  Score=65.12  Aligned_cols=215  Identities=10%  Similarity=0.040  Sum_probs=135.9

Q ss_pred             CccEEEEEe---CCCEEEEecCCCeEEEEEccccc----cccccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCC
Q psy7482          14 TASVRSVAA---TSKLAASSGADETVVLYDMVKRK----QSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus        14 ~~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~----~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~   85 (327)
                      ...+..|+|   ++.++++-...+.|+.+++....    ....+.........+++.+. +++.++-...+.|.+.+++.
T Consensus       111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g  190 (400)
T 3p5b_L          111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  190 (400)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred             cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence            345678888   34455555567888888876521    22222223345778888874 44555556678899999875


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      ......+ ...... ...+++.|.+..|+....  .+.|...++.......... ..    ......+++++++..|..+
T Consensus       191 ~~~~~l~-~~~~~~-P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~-~~----l~~P~glavd~~~~~lY~a  263 (400)
T 3p5b_L          191 VKRKTLF-RENGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-EN----IQWPNGITLDLLSGRLYWV  263 (400)
T ss_dssp             CSEEEEE-ECSSCC-EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC-SS----CSCEEEEEEETTTTEEEEE
T ss_pred             CceEEEE-eCCCCC-cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE-CC----CCceEEEEEEeCCCEEEEE
Confidence            5443333 333344 789999997666665543  3688888886433322221 11    1237899999877766665


Q ss_pred             c--CCeEEEEEecCCceeeEec---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         164 I--QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       164 ~--~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                      .  .+.|..+|+..........   .-.....+++..+..+++-...+.|..+|..+++.+..+.........+...
T Consensus       264 D~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~  340 (400)
T 3p5b_L          264 DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF  340 (400)
T ss_dssp             ETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEE
T ss_pred             ECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEE
Confidence            4  6889999987544333332   1245667888666777888888999999988887777766544445666554

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.85  E-value=1.8e-05  Score=63.61  Aligned_cols=203  Identities=10%  Similarity=0.033  Sum_probs=124.8

Q ss_pred             ccEEEEEe--C-CCEEEEecCCCeEEEEEccc----cccccccccccccEEEEEECCCCC-eEEEecCCCcEEEEEcCCC
Q psy7482          15 ASVRSVAA--T-SKLAASSGADETVVLYDMVK----RKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        15 ~~v~~~~~--~-~~~l~~~~~dg~v~~w~~~~----~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~   86 (327)
                      .....++|  . +.++++-..++.|..+++..    ......+...-.....+++.+.+. +.++-...+.|.+.+....
T Consensus        30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~  109 (316)
T 1ijq_A           30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  109 (316)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence            34567888  3 34555666678999999875    222222222223457888886544 4455566789999998754


Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeCC--CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD--KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      .....+ ...... ...+++.|.+..|+.+...  +.|...++.. +....+....    ......++++|++..|..+.
T Consensus       110 ~~~~~~-~~~~~~-P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~----~~~P~gla~d~~~~~lY~~D  182 (316)
T 1ijq_A          110 KRKTLF-RENGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTEN----IQWPNGITLDLLSGRLYWVD  182 (316)
T ss_dssp             SEEEEE-ECTTCC-EEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSS----CSCEEEEEEETTTTEEEEEE
T ss_pred             ceEEEE-ECCCCC-cceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECC----CCCceEEEEeccCCEEEEEE
Confidence            333333 333344 7899999966666655543  6788888753 3322221111    12378999998776665554


Q ss_pred             --CCeEEEEEecCCceeeEec---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee
Q psy7482         165 --QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA  224 (327)
Q Consensus       165 --~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~  224 (327)
                        .+.|..+|+..........   .......+++..+..+++-...+.|..++..+++.+..+..
T Consensus       183 ~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~  247 (316)
T 1ijq_A          183 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAE  247 (316)
T ss_dssp             TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred             CCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence              6799999987433222222   22456788886656777777888999999877776666543

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.84  E-value=2.7e-05  Score=64.85  Aligned_cols=241  Identities=7%  Similarity=-0.022  Sum_probs=147.6

Q ss_pred             EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCCC----eEEEeEEecccCCc
Q psy7482          26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSW----QLEKLFKKAHKGTA  100 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~----~~~~~~~~~~~~~~  100 (327)
                      +|+.+. ...|+..++........+. ....+..++|.+.+..|+.+ ...+.|..+++...    .....+ ...... 
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~-~~~~~~-  160 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQA-  160 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-CSSCSC-
T ss_pred             eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-eCCCCC-
Confidence            444443 4678888887654433333 34568899999866555544 45678888888652    222222 223334 


Q ss_pred             eeeEEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCC
Q psy7482         101 VNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKA  176 (327)
Q Consensus       101 v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~  176 (327)
                      ...+++.+.+..| ++-...+.|.+.+++.......... .    ......++++|.+..|..+.   .+.|...++...
T Consensus       161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~-~----~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~  235 (400)
T 3p5b_L          161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-N----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV  235 (400)
T ss_dssp             EEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC-S----SCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred             cccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC-C----CCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence            7889999844444 4445578899999875543333221 1    12378999999665555443   367888887654


Q ss_pred             ceeeEec-CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeee--cccceEEEEEEecCCCcEEEEecCCCe
Q psy7482         177 GVLQTLK-SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKA--SASRIKGLVFFSIPQETTVCTGNEESA  251 (327)
Q Consensus       177 ~~~~~~~-~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~s~~~~~l~~~~~d~~  251 (327)
                      ....... .-.....++++++ +.| ++-...+.|..+|+...........  .......+++   ..+.++++-...+.
T Consensus       236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v---~~~~lywtd~~~~~  312 (400)
T 3p5b_L          236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV---FEDKVFWTDIINEA  312 (400)
T ss_dssp             SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE---ETTEEEEEESSSCS
T ss_pred             ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE---eCCEEEEecCCCCe
Confidence            4333333 3367889999986 554 4555678899999864433222222  2234456776   35566677777788


Q ss_pred             EEEEEcCCCceeEEeecccCceEEEee
Q psy7482         252 ITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       252 i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      |..+|..+++.+..+........++..
T Consensus       313 V~~~~~~~G~~~~~i~~~~~~p~~i~v  339 (400)
T 3p5b_L          313 IFSANRLTGSDVNLLAENLLSPEDMVL  339 (400)
T ss_dssp             EEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred             EEEEEcCCCCceEEEecCCCCCceEEE
Confidence            999998888877766654444555543

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.84  E-value=1.1e-05  Score=62.16  Aligned_cols=194  Identities=12%  Similarity=0.209  Sum_probs=129.3

Q ss_pred             cccCCceeeEEEecCCCEEE-EEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEE
Q psy7482          95 AHKGTAVNHISIHPSGKLAL-SVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFS  172 (327)
Q Consensus        95 ~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d  172 (327)
                      +-... +..++|+|++..|+ +...++.|...|.. ++....+++...    .....+++.+++.++++.. ++.+.+++
T Consensus        24 g~~~~-lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~----~D~EGIa~~~~g~~~vs~E~~~~l~~~~   97 (255)
T 3qqz_A           24 GITNN-ISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV----KDLETIEYIGDNQFVISDERDYAIYVIS   97 (255)
T ss_dssp             TCCSC-EEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC----SSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred             CcccC-cceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC----CChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence            44455 99999999766555 46778889999987 877777766432    2378889999888766654 78899998


Q ss_pred             ecCCce---eeEec-------CCCceeEEEeecC-ceEEEeCCCCcEEEEEcC---CCceeEEee-------ecccceEE
Q psy7482         173 VEKAGV---LQTLK-------SESKVHSVCFLNE-TTVCTGNEESAITAYNLT---DGSHLWQIK-------ASASRIKG  231 (327)
Q Consensus       173 ~~~~~~---~~~~~-------~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~---~~~~~~~~~-------~~~~~v~~  231 (327)
                      +.....   .....       .+.....++++|+ +.|+++.+.....+|.++   ....+..+.       .+...+.+
T Consensus        98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~  177 (255)
T 3qqz_A           98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG  177 (255)
T ss_dssp             ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred             cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence            865442   22221       2345689999998 677777766555666554   111122221       12335688


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc---------CceEEEeeeC-cEEEEEecCCcEEEEE
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA---------SRIKGLASHR-NHLICITSAGDLVVWE  296 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~-~~l~~~~~dg~v~iw~  296 (327)
                      +++.+ ..+++++.......+..+|.. ++.+..+.-..         .....|+|.+ ..|+..++.+.++.+.
T Consensus       178 l~~dp-~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~  250 (255)
T 3qqz_A          178 AEFNQ-QKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT  250 (255)
T ss_dssp             EEEET-TTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred             EEEcC-CCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence            99985 667788888888999999965 55555444321         2568899999 5566667777555554

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.80  E-value=2.2e-05  Score=63.11  Aligned_cols=212  Identities=11%  Similarity=0.004  Sum_probs=132.7

Q ss_pred             cEEEEEe---CCCEEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCC-CCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482          16 SVRSVAA---TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        16 ~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      .+.+++|   ++.++.+-...+.|..+++....... .+...-.....+++.+. +++.++-...+.|.+++++... ..
T Consensus        36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~  114 (318)
T 3sov_A           36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RK  114 (318)
T ss_dssp             EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred             ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EE
Confidence            3556777   35566666677889999887653221 22222234567888874 4455555667789999987533 33


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN  166 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~  166 (327)
                      .+....... ...+++.|.+..|+.+..  .+.|...++.... ...+....    ......++++|++..|..+.  .+
T Consensus       115 ~l~~~~~~~-P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~----l~~Pnglavd~~~~~lY~aD~~~~  188 (318)
T 3sov_A          115 VLFWQELDQ-PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSE----IYWPNGLTLDYEEQKLYWADAKLN  188 (318)
T ss_dssp             EEECSSCSS-EEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSS----CSCEEEEEEETTTTEEEEEETTTT
T ss_pred             EEEeCCCCC-ccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECC----CCCccEEEEeccCCEEEEEECCCC
Confidence            331333444 789999997666666553  5778888875332 22221111    12378999999766665553  78


Q ss_pred             eEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482         167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF  234 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  234 (327)
                      .|..+|+.......... .......+++..+..+++-...+.|..++..+++....+........+++.
T Consensus       189 ~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v  257 (318)
T 3sov_A          189 FIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHA  257 (318)
T ss_dssp             EEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEE
T ss_pred             EEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEE
Confidence            99999987543333333 345667888876677888888899999998888766665543333444544

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.79  E-value=3.3e-05  Score=64.92  Aligned_cols=151  Identities=11%  Similarity=0.113  Sum_probs=97.0

Q ss_pred             cEEEEEECC-CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-C----CEEEEEcCC
Q psy7482          56 TITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-K----TLRTWNLVK  129 (327)
Q Consensus        56 ~v~~~~~~~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g----~i~iwd~~~  129 (327)
                      ....++++| ++..|+.+...+.|+.+|+..+...... . .... ...++|+++++.|+.+... +    .+..++. .
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~-~~~~-P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~  213 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-S-GLSK-VRTICWTHEADSMIITNDQNNNDRPNNYILTR-E  213 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-C-CCSC-EEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-c-CCCC-cceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence            356889998 4556666665578999999876655444 2 3334 8899999999966666542 2    2333443 3


Q ss_pred             CceeeeeeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCCceeeEec--CCCceeEEEeecC-c-eEEEeC
Q psy7482         130 GRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-T-TVCTGN  203 (327)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~-~l~~~~  203 (327)
                      +.......+..    ......++++| ++.++++-. ++.|..++...+.......  .......++++|+ + ++++-.
T Consensus       214 g~~~~~~~l~~----~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~  289 (430)
T 3tc9_A          214 SGFKVITELTK----GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV  289 (430)
T ss_dssp             GTSCSEEEEEE----CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred             Cceeeeeeecc----CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence            33221111111    11267889999 666666654 7899999988765433332  3345789999998 5 455666


Q ss_pred             CCCcEEEEEcC
Q psy7482         204 EESAITAYNLT  214 (327)
Q Consensus       204 ~d~~i~i~d~~  214 (327)
                      ..+.|..++..
T Consensus       290 ~~~~I~~~~~d  300 (430)
T 3tc9_A          290 NQHYILRSDYD  300 (430)
T ss_dssp             TTTEEEEEEEE
T ss_pred             CCCEEEEEeCC
Confidence            78889998765

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.76  E-value=1.1e-05  Score=64.57  Aligned_cols=196  Identities=13%  Similarity=0.265  Sum_probs=124.5

Q ss_pred             CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecC----CC---EEEEEeC---CCCEEEEEcC--CCcee
Q psy7482          66 GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS----GK---LALSVGK---DKTLRTWNLV--KGRSA  133 (327)
Q Consensus        66 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---dg~i~iwd~~--~~~~~  133 (327)
                      ..+++.....+-+.+||+ +|+.+..+ ..  +. ++.+..-|+    ++   ++++...   +++|.+|++.  +++ +
T Consensus        40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~-~~--g~-~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l  113 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSL-DGKMLHSY-NT--GK-LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L  113 (355)
T ss_dssp             GCEEEEEETTTEEEEEET-TSCEEEEE-CC--SC-EEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred             ccEEEEEcCCCCEEEEcC-CCcEEEEc-cC--CC-cccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence            345666667788999999 78888877 32  33 677776663    22   2333333   4789999773  333 2


Q ss_pred             eeeecc--ccCccccceEEEEE--ccC-Cc-EEEee-cCCeEEEEEec-------CCceeeEecCCCceeEEEeecC-ce
Q psy7482         134 YITNLS--SYGVGFENLDSVVW--SPE-GL-LYAIP-IQNKAVVFSVE-------KAGVLQTLKSESKVHSVCFLNE-TT  198 (327)
Q Consensus       134 ~~~~~~--~~~~~~~~v~~~~~--~~~-~~-~l~~~-~~~~i~i~d~~-------~~~~~~~~~~~~~i~~~~~~~~-~~  198 (327)
                      ......  ........+..+++  +|. ++ ++.+. .+|.+..|++.       +.+.++++...+.+..+...+. +.
T Consensus       114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~  193 (355)
T 3amr_A          114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR  193 (355)
T ss_dssp             EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred             eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence            222110  00001123666777  774 44 33333 48999999883       3466778887888999999987 89


Q ss_pred             EEEeCCCCcEEEEEcC-----CCceeEEee-ec-ccceEEEEEEecCCCc-EEEEec-CCCeEEEEEcC-CCceeEEee
Q psy7482         199 VCTGNEESAITAYNLT-----DGSHLWQIK-AS-ASRIKGLVFFSIPQET-TVCTGN-EESAITAYNLT-DGSHLWHIK  267 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~~~s~~~~-~l~~~~-~d~~i~i~d~~-~~~~~~~~~  267 (327)
                      |+.+-++.-|..|+.+     +++.+..+. ++ ...+..|++.+.++++ +|++++ .++...+||.. +.+.+..+.
T Consensus       194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~  272 (355)
T 3amr_A          194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR  272 (355)
T ss_dssp             EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred             EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence            9999998777777755     234454442 22 2367888886435555 565555 56799999996 666776664

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.72  E-value=2.1e-06  Score=76.45  Aligned_cols=236  Identities=11%  Similarity=0.049  Sum_probs=133.6

Q ss_pred             EEEECC-CCCeEEEecCCC-----------cEEEEEcCCCeEEE--eEEecccCCceeeEEEecCCCEEEEEeC-CCCEE
Q psy7482          59 CLKFTP-EGSHLISCSDDG-----------SIAIFRVGSWQLEK--LFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLR  123 (327)
Q Consensus        59 ~~~~~~-~~~~l~~~~~d~-----------~i~iw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~  123 (327)
                      ++++.+ +++.++.|+.+.           .+.+||..+++...  .+...+... ..++++..++++++.|+. +..+.
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~-~~~~~~~~~g~lyv~GG~~~~~v~  268 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF-CPGISMDGNGQIVVTGGNDAKKTS  268 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS-SCEEEECTTSCEEEECSSSTTCEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc-cccccCCCCCCEEEeCCCCCCceE
Confidence            456667 788888887543           58899988765433  221222222 345677889999999884 46899


Q ss_pred             EEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-----CeEEEEEecCCceeeEe-----cCCCceeEE
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-----NKAVVFSVEKAGVLQTL-----KSESKVHSV  191 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-----~~i~i~d~~~~~~~~~~-----~~~~~i~~~  191 (327)
                      +||..+.+......++...    .-.+++..+++++++.|+  +     ..+.+||..+.+-...-     .....-...
T Consensus       269 ~yd~~t~~W~~~~~~~~~R----~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~  344 (656)
T 1k3i_A          269 LYDSSSDSWIPGPDMQVAR----GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQG  344 (656)
T ss_dssp             EEEGGGTEEEECCCCSSCC----SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTG
T ss_pred             EecCcCCceeECCCCCccc----cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccc
Confidence            9999887655443322221    123556667888888876  3     46899999876533220     000000001


Q ss_pred             EeecC-ceEEEeCC---------CCcEEEEEcCCCceeEEeeeccc---------ceEEEEEEecCCCcEEEEecCCC--
Q psy7482         192 CFLNE-TTVCTGNE---------ESAITAYNLTDGSHLWQIKASAS---------RIKGLVFFSIPQETTVCTGNEES--  250 (327)
Q Consensus       192 ~~~~~-~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~---------~v~~~~~~~s~~~~~l~~~~~d~--  250 (327)
                      .+..+ ..++.|+.         ...+..||..+.........+..         .-.++.+. ..++++++.|+.++  
T Consensus       345 ~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~-~~~~~i~v~GG~~~~~  423 (656)
T 1k3i_A          345 LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD-AVKGKILTFGGSPDYQ  423 (656)
T ss_dssp             GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE-TTTTEEEEECCBSSSS
T ss_pred             eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEecc-CCCCeEEEEeCCCCCC
Confidence            11122 33344433         34577888877654332222111         12333332 14788888888543  


Q ss_pred             ---------eEEEEEcCCCceeEEe--ecccCce-EEEeeeC--cEEEEEecC-----------CcEEEEEccCc
Q psy7482         251 ---------AITAYNLTDGSHLWHI--KASASRI-KGLASHR--NHLICITSA-----------GDLVVWELNED  300 (327)
Q Consensus       251 ---------~i~i~d~~~~~~~~~~--~~~~~~v-~~~~~~~--~~l~~~~~d-----------g~v~iw~~~~~  300 (327)
                               .+.+||..+.+-....  ..+.... .+.+..+  ++++.|+.+           ..+.+||..+.
T Consensus       424 ~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~  498 (656)
T 1k3i_A          424 DSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD  498 (656)
T ss_dssp             SSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred             CCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence                     6788887766533322  1122222 2333333  888888764           45899998776

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.70  E-value=3.3e-05  Score=62.44  Aligned_cols=230  Identities=13%  Similarity=0.098  Sum_probs=125.7

Q ss_pred             CccEEEEEeCCCEEEEecCCCeEEEEEccccccccccc---cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482          14 TASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALM---QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        14 ~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      ...+.++.++++.++.++.++.|.. ....++.-....   .+...+..+.+.+++..++.+. +|.|.. ..+.++.-.
T Consensus        79 ~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~  155 (327)
T 2xbg_A           79 DYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGKNWQ  155 (327)
T ss_dssp             CCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTSSEE
T ss_pred             CccEEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCCCCE
Confidence            4468888884344444555675544 222233211111   2334577788777776666554 554322 222333333


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEE
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVV  170 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i  170 (327)
                      ......... +..+.+.+++.+++.+. +|.+..-+-..++.-.......    ...+..+.+.+++.+++++.+|.+++
T Consensus       156 ~~~~~~~~~-~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~----~~~~~~~~~~~~g~~~~~~~~G~~~~  229 (327)
T 2xbg_A          156 ALVQEAIGV-MRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTT----SRRLHNMGFTPDGRLWMIVNGGKIAF  229 (327)
T ss_dssp             EEECSCCCC-EEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEECCS----SSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred             EeecCCCcc-eEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECCCCC----CCccceeEECCCCCEEEEeCCceEEE
Confidence            332334444 88999999888776654 4555443211122222221111    12388899999999888887888777


Q ss_pred             EEecCCceeeEec-----CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee---cccceEEEEEEecCCCcE
Q psy7482         171 FSVEKAGVLQTLK-----SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA---SASRIKGLVFFSIPQETT  242 (327)
Q Consensus       171 ~d~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~s~~~~~  242 (327)
                      .+...++.-..+.     ....+.++.+.+++.+++++.++.+ .+....++.-..+..   ....+..+.|.  +++. 
T Consensus       230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~--~~~~-  305 (327)
T 2xbg_A          230 SDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFF--SPDQ-  305 (327)
T ss_dssp             EETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEE--ETTE-
T ss_pred             ecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEE--CCCc-
Confidence            6433344333332     1235788888877555555557766 344444543333321   23467888884  3444 


Q ss_pred             EEEecCCCeEEEEE
Q psy7482         243 VCTGNEESAITAYN  256 (327)
Q Consensus       243 l~~~~~d~~i~i~d  256 (327)
                      +++++.+|.|.-++
T Consensus       306 ~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          306 GFILGQKGILLRYV  319 (327)
T ss_dssp             EEEECSTTEEEEEC
T ss_pred             eEEEcCCceEEEEc
Confidence            55666788777665

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.70  E-value=3.1e-05  Score=65.13  Aligned_cols=232  Identities=10%  Similarity=0.092  Sum_probs=130.9

Q ss_pred             cEEEEEeC----CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---Cc-EEEEEcCCCe
Q psy7482          16 SVRSVAAT----SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GS-IAIFRVGSWQ   87 (327)
Q Consensus        16 ~v~~~~~~----~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~-i~iw~~~~~~   87 (327)
                      ....|+++    +..|+.+...+.|+.+|..+++...... .......++++++++++++-...   .. +...+...+.
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~  218 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF  218 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred             CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence            45577774    2455555544889999987776544333 44568899999999944443311   11 3333332211


Q ss_pred             E-EEeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCcee-eeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          88 L-EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSA-YITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        88 ~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      . ...+  ..... ...++++| ++.+.++-..++.|+.+|..++... ........    .....++|+|+++.|.++.
T Consensus       219 ~~~~~~--~~~~~-P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~----~~~~~ia~dpdG~~LYvad  291 (433)
T 4hw6_A          219 TERLSL--CNARG-AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK----GSNFHIVWHPTGDWAYIIY  291 (433)
T ss_dssp             CCEEEE--EECSS-BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC----SSCEEEEECTTSSEEEEEE
T ss_pred             eccccc--cccCC-CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC----CCcccEEEeCCCCEEEEEe
Confidence            1 1122  12233 67789999 6665555556788999998867652 22222111    1134699999998555543


Q ss_pred             --CCeEEEEEecC--Cce--eeEec-C---------------CCceeEEEe---------ecCc-eEEEeCCCCcEEEEE
Q psy7482         165 --QNKAVVFSVEK--AGV--LQTLK-S---------------ESKVHSVCF---------LNET-TVCTGNEESAITAYN  212 (327)
Q Consensus       165 --~~~i~i~d~~~--~~~--~~~~~-~---------------~~~i~~~~~---------~~~~-~l~~~~~d~~i~i~d  212 (327)
                        .+.|+.++...  +..  ...+. .               -.....+++         .+++ ++++-...+.|+.++
T Consensus       292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~  371 (433)
T 4hw6_A          292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT  371 (433)
T ss_dssp             TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred             CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence              68899988652  221  11111 0               123667888         5564 455556677898888


Q ss_pred             cCCCceeEEeeec------------------ccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         213 LTDGSHLWQIKAS------------------ASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       213 ~~~~~~~~~~~~~------------------~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                      . ++. +.++.+.                  -.....+++.+ +++.++++-...+.|+.++++
T Consensus       372 ~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~-~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          372 P-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDM-KRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             T-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEET-TTTEEEEEEGGGTEEEEEEEC
T ss_pred             C-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEEC-CCCEEEEEeCCCCEEEEEecC
Confidence            4 453 3333221                  11245667631 455555555555666666543

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.69  E-value=0.00017  Score=65.09  Aligned_cols=230  Identities=7%  Similarity=-0.013  Sum_probs=138.6

Q ss_pred             EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCC----eEEEeEEecccCCc
Q psy7482          26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSW----QLEKLFKKAHKGTA  100 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~~~  100 (327)
                      +|+.+. ...|+..++........+. ....+..++|.+.+..| ++-...+.|+.+++...    .....+ ...... 
T Consensus       397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi-~~~l~~-  472 (791)
T 3m0c_C          397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQA-  472 (791)
T ss_dssp             EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEE-CSSCSC-
T ss_pred             cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEE-ecCCCC-
Confidence            444443 3557777776554433333 34567889999855544 45555678888888653    222222 223344 


Q ss_pred             eeeEEEecCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-CeEEEEEecCC
Q psy7482         101 VNHISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-NKAVVFSVEKA  176 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-~~i~i~d~~~~  176 (327)
                      ...|++.+.++.|+.+ ...+.|.+.++.......... ..    ......|++.|.+..|..+.  . +.|...++...
T Consensus       473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-~~----l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~  547 (791)
T 3m0c_C          473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-EN----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV  547 (791)
T ss_dssp             CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-CT----TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred             cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-CC----CCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence            7889999877555544 457889999987544322222 11    12388999999755554443  3 68888888655


Q ss_pred             ceeeEec-CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeeec--ccceEEEEEEecCCCcEEEEecCCCe
Q psy7482         177 GVLQTLK-SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKAS--ASRIKGLVFFSIPQETTVCTGNEESA  251 (327)
Q Consensus       177 ~~~~~~~-~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~~~l~~~~~d~~  251 (327)
                      .....+. .-.....|++++. +.| ++-...+.|..+++........+...  -.....|++   ..+.++++-...+.
T Consensus       548 ~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav---~~~~lYwtD~~~~~  624 (791)
T 3m0c_C          548 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV---FEDKVFWTDIINEA  624 (791)
T ss_dssp             CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE---ETTEEEEEETTTTE
T ss_pred             ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEE---eCCEEEEEECCCCE
Confidence            4444443 3367889999976 554 44456678999998644333333321  223456666   34566666667788


Q ss_pred             EEEEEcCCCceeEEee
Q psy7482         252 ITAYNLTDGSHLWHIK  267 (327)
Q Consensus       252 i~i~d~~~~~~~~~~~  267 (327)
                      |...|..+++.+..+.
T Consensus       625 I~~~dk~tG~~~~~l~  640 (791)
T 3m0c_C          625 IFSANRLTGSDVNLLA  640 (791)
T ss_dssp             EEEEETTTCCCCEEEE
T ss_pred             EEEEeCCCCcceEEee
Confidence            9988887776655554

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.67  E-value=0.0001  Score=61.88  Aligned_cols=151  Identities=13%  Similarity=0.120  Sum_probs=93.4

Q ss_pred             cEEEEEeC---CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC-CC----cEEEEEcCCCe
Q psy7482          16 SVRSVAAT---SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DG----SIAIFRVGSWQ   87 (327)
Q Consensus        16 ~v~~~~~~---~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~iw~~~~~~   87 (327)
                      ....|+++   +..|+.+...+.|+.+|+..++..... ........++|+++++.|+++.. ++    .+...+. .+.
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~  215 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG  215 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence            34566664   345555554478889998766543333 34456889999999996666554 22    2333443 332


Q ss_pred             EE--EeEEecccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-
Q psy7482          88 LE--KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-  163 (327)
Q Consensus        88 ~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-  163 (327)
                      ..  ..+ . .... ...++++| ++.++++-..++.|..++...+...........    .....++|+|+++.|.++ 
T Consensus       216 ~~~~~~l-~-~~~~-p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~----~~P~gia~~pdG~~lyv~d  288 (430)
T 3tc9_A          216 FKVITEL-T-KGQN-CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDS----GWEFHIQFHPSGNYAYIVV  288 (430)
T ss_dssp             SCSEEEE-E-ECSS-CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSS----SCCEEEEECTTSSEEEEEE
T ss_pred             eeeeeee-c-cCCC-ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCC----CcceeEEEcCCCCEEEEEE
Confidence            22  233 1 2233 67889999 666666655678999999876654233222221    237789999999955544 


Q ss_pred             c-CCeEEEEEecC
Q psy7482         164 I-QNKAVVFSVEK  175 (327)
Q Consensus       164 ~-~~~i~i~d~~~  175 (327)
                      . .+.|..++...
T Consensus       289 ~~~~~I~~~~~d~  301 (430)
T 3tc9_A          289 VNQHYILRSDYDW  301 (430)
T ss_dssp             TTTTEEEEEEEET
T ss_pred             CCCCEEEEEeCCc
Confidence            3 78999988763

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.61  E-value=0.00017  Score=60.65  Aligned_cols=196  Identities=9%  Similarity=0.101  Sum_probs=116.6

Q ss_pred             cEEEEEECCC--CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC-----CEEEEEcC
Q psy7482          56 TITCLKFTPE--GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK-----TLRTWNLV  128 (327)
Q Consensus        56 ~v~~~~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~  128 (327)
                      ....++|.|+  +..|+.+...+.|+.+|..+++.....  ..... ...++++++++ |+.+...+     .+...+..
T Consensus       140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~--~~~~~-P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~  215 (433)
T 4hw6_A          140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT--TNIGQ-CADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA  215 (433)
T ss_dssp             CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC--CCCSC-EEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred             CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee--cCCCC-ccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence            3568999984  445555554488999999877765544  23334 88999999999 55444322     13333332


Q ss_pred             CCceeeeeeccccCccccceEEEEEcc-CCcEEEeec-CCeEEEEEecCCceeeEe-c--CCCceeEEEeecC-c-eEEE
Q psy7482         129 KGRSAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTL-K--SESKVHSVCFLNE-T-TVCT  201 (327)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~-~--~~~~i~~~~~~~~-~-~l~~  201 (327)
                      .+. ........    ......++++| ++.++++.. ++.|+.+|..++.....+ .  .......++++|+ + ++++
T Consensus       216 ~~~-~~~~~~~~----~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva  290 (433)
T 4hw6_A          216 SGF-TERLSLCN----ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII  290 (433)
T ss_dssp             GTT-CCEEEEEE----CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred             CCe-eccccccc----cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence            211 10001111    12266788999 666666654 788999998877653322 2  2223346999998 5 4556


Q ss_pred             eCCCCcEEEEEcCC--Cce--eEEeeec---------------ccceEEEEEEe-------cCCCcEEEEecCCCeEEEE
Q psy7482         202 GNEESAITAYNLTD--GSH--LWQIKAS---------------ASRIKGLVFFS-------IPQETTVCTGNEESAITAY  255 (327)
Q Consensus       202 ~~~d~~i~i~d~~~--~~~--~~~~~~~---------------~~~v~~~~~~~-------s~~~~~l~~~~~d~~i~i~  255 (327)
                      -...+.|+.++...  +..  ...+.+.               -.....+++..       .+++.++++-...+.|+.+
T Consensus       291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~  370 (433)
T 4hw6_A          291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL  370 (433)
T ss_dssp             ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred             eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence            66778899988652  221  1122221               11245677721       1567777777777889999


Q ss_pred             EcCCCc
Q psy7482         256 NLTDGS  261 (327)
Q Consensus       256 d~~~~~  261 (327)
                      +. ++.
T Consensus       371 ~~-~G~  375 (433)
T 4hw6_A          371 TP-EGR  375 (433)
T ss_dssp             CT-TSE
T ss_pred             CC-CCC
Confidence            84 553

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.59  E-value=0.00023  Score=64.33  Aligned_cols=213  Identities=9%  Similarity=0.020  Sum_probs=130.1

Q ss_pred             ccEEEEEe---CCCEEEEecCCCeEEEEEcccc----ccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCC
Q psy7482          15 ASVRSVAA---TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        15 ~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~   86 (327)
                      ..+..|++   ++.++++-...+.|+.+++...    .....+.........|++.+.++.| ++-...+.|.+.++...
T Consensus       424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~  503 (791)
T 3m0c_C          424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV  503 (791)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred             CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence            44667777   3445556666778888887642    2222222233456678888766544 45566788999998754


Q ss_pred             eEEEeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      .. ..+....... ...|++.|.+..|+.+..  .+.|...++......... ...    ......|++++.+..|..+.
T Consensus       504 ~~-~~l~~~~l~~-P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv-~~~----l~~P~GLavD~~~~~LYwaD  576 (791)
T 3m0c_C          504 KR-KTLFRENGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TEN----IQWPNGITLDLLSGRLYWVD  576 (791)
T ss_dssp             SE-EEEEECTTCC-EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-CSS----CSCEEEEEEETTTTEEEEEE
T ss_pred             eE-EEEEeCCCCC-cceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE-eCC----CCCceEEEEecCCCeEEEEe
Confidence            43 3332333444 889999997666666553  267888888644332222 111    12388999998766665554


Q ss_pred             --CCeEEEEEecCCceeeEecC---CCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482         165 --QNKAVVFSVEKAGVLQTLKS---ESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF  234 (327)
Q Consensus       165 --~~~i~i~d~~~~~~~~~~~~---~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  234 (327)
                        .+.|..+++........+..   -....+|++..+.++++-...+.|...|..+++.+..+.........|++
T Consensus       577 ~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v  651 (791)
T 3m0c_C          577 SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL  651 (791)
T ss_dssp             TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEE
T ss_pred             CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEee
Confidence              67899999865544443332   23456777766667777778888999988777665555433323334443

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.56  E-value=0.00035  Score=61.61  Aligned_cols=229  Identities=11%  Similarity=0.040  Sum_probs=143.1

Q ss_pred             EEEEecCCCeEEEEEccccccccccc-cccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccCCceee
Q psy7482          26 LAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH  103 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~  103 (327)
                      +|+.+ ..+.|+..++.+......+. ..-..+..++|.+.+..|+ +-..++.|..+++........+ ...... ...
T Consensus         8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~-~~g~~~-P~G   84 (628)
T 4a0p_A            8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV-EFGLDY-PEG   84 (628)
T ss_dssp             EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSC-CCE
T ss_pred             EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE-eCCCCC-cce
Confidence            44444 45679999987654332222 1234578999999666555 4456788998888755443333 222234 778


Q ss_pred             EEEecCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCCcee
Q psy7482         104 ISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVL  179 (327)
Q Consensus       104 ~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~  179 (327)
                      +++.+.+..|+.+ ...+.|.+.++......... ...    ......+++.|....|..+.   .+.|...++......
T Consensus        85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~-~~~----l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~  159 (628)
T 4a0p_A           85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLV-WKD----LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT  159 (628)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEE-CSS----CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred             EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEE-eCC----CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence            9998765555544 45678999998654322222 111    12378999998554444443   567888887655544


Q ss_pred             eEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         180 QTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       180 ~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      .....-.....++++++ +. +++-...+.|..+|+..... ..+.........+++.   .+..+++-...+.|...|.
T Consensus       160 ~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~---~~~ly~tD~~~~~I~~~dk  235 (628)
T 4a0p_A          160 TLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQY---QDYIYWTDWSRRSIERANK  235 (628)
T ss_dssp             EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEE---TTEEEEEETTTTEEEEEET
T ss_pred             EEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEE---CCEEEEecCCCCEEEEEEC
Confidence            44445567889999986 54 45556778899999865443 3343333445678873   3566666666788999997


Q ss_pred             CCCceeEEe
Q psy7482         258 TDGSHLWHI  266 (327)
Q Consensus       258 ~~~~~~~~~  266 (327)
                      .+++....+
T Consensus       236 ~tg~~~~~l  244 (628)
T 4a0p_A          236 TSGQNRTII  244 (628)
T ss_dssp             TTCCSCEEE
T ss_pred             CCCCceEEE
Confidence            776544333

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.56  E-value=1.2e-05  Score=72.71  Aligned_cols=188  Identities=14%  Similarity=0.146  Sum_probs=110.8

Q ss_pred             eeeEEEe-cCCCEEEEEeC-CC----CEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeec-C-----Ce
Q psy7482         101 VNHISIH-PSGKLALSVGK-DK----TLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NK  167 (327)
Q Consensus       101 v~~~~~~-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~  167 (327)
                      +....|+ |||++|+.+.. +|    .|+++|+.++ +.+.. .+.      .....+.|+||++.|+... +     ..
T Consensus       176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~------~~~~~~~WspDg~~l~y~~~d~~~~~~~  248 (751)
T 2xe4_A          176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVS------GTNGEIVWGPDHTSLFYVTKDETLRENK  248 (751)
T ss_dssp             EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEE------EECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred             EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-ccc------CceeeEEEecCCCEEEEEEECCCCCCCE
Confidence            7788999 99998876543 33    4999999988 63211 011      1134688999998776654 3     36


Q ss_pred             EEEEEecCCce--eeEec--CCCceeEEEeecC-ceEEEeC---CCCcEEEEEcCCCc-ee--EEe-eecccceEEEEEE
Q psy7482         168 AVVFSVEKAGV--LQTLK--SESKVHSVCFLNE-TTVCTGN---EESAITAYNLTDGS-HL--WQI-KASASRIKGLVFF  235 (327)
Q Consensus       168 i~i~d~~~~~~--~~~~~--~~~~i~~~~~~~~-~~l~~~~---~d~~i~i~d~~~~~-~~--~~~-~~~~~~v~~~~~~  235 (327)
                      |+.+++.++..  ...+.  .......+.|+|| .+|+..+   ....|+++|+.++. ..  ..+ ........++.|.
T Consensus       249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~  328 (751)
T 2xe4_A          249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH  328 (751)
T ss_dssp             EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE
T ss_pred             EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee
Confidence            78888876642  22222  3345678899999 5555433   34568888987752 22  333 3334455555542


Q ss_pred             ecCCCcEEEEecCC----CeEEEEEcCCCceeEE-eecccC--ceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482         236 SIPQETTVCTGNEE----SAITAYNLTDGSHLWH-IKASAS--RIKGLASHR-NHLICITSAGDLVVWEL  297 (327)
Q Consensus       236 ~s~~~~~l~~~~~d----~~i~i~d~~~~~~~~~-~~~~~~--~v~~~~~~~-~~l~~~~~dg~v~iw~~  297 (327)
                        .++.+++....+    ..|..+++.++..... +..+..  .+..+.+.. .++++...+|..++|-+
T Consensus       329 --~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~  396 (751)
T 2xe4_A          329 --GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTM  396 (751)
T ss_dssp             --TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEE
T ss_pred             --eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEE
Confidence              344444454443    3677778765322222 223332  455666666 66777777887555443

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.55  E-value=7.8e-05  Score=59.70  Aligned_cols=189  Identities=14%  Similarity=0.211  Sum_probs=121.0

Q ss_pred             CEEEEecCCCeEEEEEccccccccccccccccEEEEEECCC----CC---e-EEEecC--CCcEEEEEcC--CCeEEEeE
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE----GS---H-LISCSD--DGSIAIFRVG--SWQLEKLF   92 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~-l~~~~~--d~~i~iw~~~--~~~~~~~~   92 (327)
                      .+++.....+-+.+||+ +++.++.+..  +.++.+..-|+    |+   + +++.-.  +++|.+|++.  ++. +..+
T Consensus        41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i  116 (355)
T 3amr_A           41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSM  116 (355)
T ss_dssp             CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEEC
T ss_pred             cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeec
Confidence            45555566788999999 8888888763  55677766652    22   2 233333  5789999773  333 3333


Q ss_pred             Ee-----cccCCceeeEEE--ecC-CC-EEEEEeCCCCEEEEEcC-------CCceeeeeeccccCccccceEEEEEccC
Q psy7482          93 KK-----AHKGTAVNHISI--HPS-GK-LALSVGKDKTLRTWNLV-------KGRSAYITNLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        93 ~~-----~~~~~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~  156 (327)
                      ..     ......+..+++  +|. ++ ++++...+|.+..|++.       +.+.+..+.+...      +..+...+.
T Consensus       117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq------~EgcvvDd~  190 (355)
T 3amr_A          117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ------TEGMAADDE  190 (355)
T ss_dssp             SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC------EEEEEEETT
T ss_pred             cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC------cceEEEcCC
Confidence            11     011022777888  664 43 67888889999999983       2344455555443      888889988


Q ss_pred             CcEEEeec-CCeEEEEEec-----CCceeeEecC---CCceeEEEee--cC--ceEEEeC-CCCcEEEEEcC-CCceeEE
Q psy7482         157 GLLYAIPI-QNKAVVFSVE-----KAGVLQTLKS---ESKVHSVCFL--NE--TTVCTGN-EESAITAYNLT-DGSHLWQ  221 (327)
Q Consensus       157 ~~~l~~~~-~~~i~i~d~~-----~~~~~~~~~~---~~~i~~~~~~--~~--~~l~~~~-~d~~i~i~d~~-~~~~~~~  221 (327)
                      ...|.++. +..|..|+.+     +++.+..+..   ...+..+++-  ++  ++|++++ .++.+.+||.. +.+.+..
T Consensus       191 ~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~  270 (355)
T 3amr_A          191 YGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVAD  270 (355)
T ss_dssp             TTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEE
T ss_pred             CCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEE
Confidence            77777776 6667777755     3445555542   2468888885  33  4666665 67799999986 5555555


Q ss_pred             ee
Q psy7482         222 IK  223 (327)
Q Consensus       222 ~~  223 (327)
                      |.
T Consensus       271 f~  272 (355)
T 3amr_A          271 FR  272 (355)
T ss_dssp             EE
T ss_pred             EE
Confidence            54

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.52  E-value=0.00044  Score=60.97  Aligned_cols=194  Identities=6%  Similarity=-0.034  Sum_probs=120.5

Q ss_pred             ccEEEEEe---CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEE
Q psy7482          15 ASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        15 ~~v~~~~~---~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      ..+..|+|   ++.++++-..++.|..+++........+.........+++.+.+..| ++-...+.|.+.++..... .
T Consensus        37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~  115 (628)
T 4a0p_A           37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-Q  115 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-E
T ss_pred             CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-E
Confidence            34667888   34555566677889888876543332333222346678887755544 5555577899999865432 3


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN  166 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~  166 (327)
                      .+....... ...+++.|....|+....  .+.|...++..........  .    ......+++++++..|..+.  .+
T Consensus       116 ~l~~~~l~~-P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~--~----~~~P~GlalD~~~~~LY~aD~~~~  188 (628)
T 4a0p_A          116 VLVWKDLDS-PRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP--N----VGRANGLTIDYAKRRLYWTDLDTN  188 (628)
T ss_dssp             EEECSSCCC-EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--S----CSSEEEEEEETTTTEEEEEETTTT
T ss_pred             EEEeCCCCC-cccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC--C----CCCcceEEEccccCEEEEEECCCC
Confidence            331233344 789999996556665553  4678888876444322221  1    22388999999876666654  78


Q ss_pred             eEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCc
Q psy7482         167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGS  217 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  217 (327)
                      .|..+|+..... ..+. .......+++..+..+++-...+.|...|..+++
T Consensus       189 ~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~  239 (628)
T 4a0p_A          189 LIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ  239 (628)
T ss_dssp             EEEEEETTSCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred             EEEEEcCCCCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence            899999876544 2332 3344567777766666666667777777765543

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.49  E-value=0.00092  Score=63.07  Aligned_cols=293  Identities=12%  Similarity=0.073  Sum_probs=157.8

Q ss_pred             ccEEEEEeCCCEEEEecCCCeEEEEEccccccccc-cccccccEEEEEECCC------CCeEEEecC-CCcEEEEEcCCC
Q psy7482          15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPE------GSHLISCSD-DGSIAIFRVGSW   86 (327)
Q Consensus        15 ~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~-~~~~~~~v~~~~~~~~------~~~l~~~~~-d~~i~iw~~~~~   86 (327)
                      ..|...+.++.+++.+. ++.+.++++.+++.... -..-...|.|+++.|.      ++++++|.. |++++|+++.+.
T Consensus       514 ~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l  592 (1158)
T 3ei3_A          514 KNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF  592 (1158)
T ss_dssp             CCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred             CEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence            35666666666776664 67888888765432211 1123567999999863      468999996 999999999877


Q ss_pred             eEEEeEEecccCCceeeEEEec--CCCEEEEEeCCCCEEEEEcC--CCceeeeeeccccCccccceEEEEEccCC-cEEE
Q psy7482          87 QLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLV--KGRSAYITNLSSYGVGFENLDSVVWSPEG-LLYA  161 (327)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~  161 (327)
                      +.+.....+.... ..++.+..  ...+|..|-.||.+.-+.++  +++........   .+..++.-..+...+ ..+.
T Consensus       593 ~~~~~~~L~~~~~-p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~---LG~~pv~L~~~~~~~~~~V~  668 (1158)
T 3ei3_A          593 ELLHKEMLGGEII-PRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVT---LGTQPTVLRTFRSLSTTNVF  668 (1158)
T ss_dssp             CEEEEEECCSSCC-EEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEE---CCSSCCEEEEEESSSCEEEE
T ss_pred             CeEEEEECCCCCC-CcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEE---cCCCceEEEEEeeCCceeEE
Confidence            6665442222222 45554443  34578889899988766554  44433221110   112234433343333 2333


Q ss_pred             eecCCeEEEEEecCCceeeEecCCCcee-EEEeec----CceEEEeCCCCcEEEEEcCCCce--eEEeeecccceEEEEE
Q psy7482         162 IPIQNKAVVFSVEKAGVLQTLKSESKVH-SVCFLN----ETTVCTGNEESAITAYNLTDGSH--LWQIKASASRIKGLVF  234 (327)
Q Consensus       162 ~~~~~~i~i~d~~~~~~~~~~~~~~~i~-~~~~~~----~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~  234 (327)
                      +.++.-..+|..+ ++....--....+. ...|+.    ++.++ .+ ++.++|..+.+.+.  +++++- ...+..+++
T Consensus       669 a~s~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v~-~~-~~~LrI~~i~~~~~~~~~~ipL-~~Tprri~y  744 (1158)
T 3ei3_A          669 ACSDRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLAL-AN-NSTLTIGTIDEIQKLHIRTVPL-YESPRKICY  744 (1158)
T ss_dssp             EESSSCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEEE-EC-SSCEEEEEECCSSSEEEEEEEC-SSEEEEEEE
T ss_pred             EECCCCEEEEEcC-CceEEeccChHHhceEeccCcccCCCcEEE-Ec-CCceEEEEecccCCeeEEEEeC-CCCceEEEE
Confidence            3344444444433 33222111222332 333432    23443 33 44588888754332  222322 234566666


Q ss_pred             EecCCCcEEEEec-------------------------------------------------CCCeEEEEEcCCCceeEE
Q psy7482         235 FSIPQETTVCTGN-------------------------------------------------EESAITAYNLTDGSHLWH  265 (327)
Q Consensus       235 ~~s~~~~~l~~~~-------------------------------------------------~d~~i~i~d~~~~~~~~~  265 (327)
                      +  |+.+.++.+.                                                 .-+.|++.|..+.+.+..
T Consensus       745 ~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~  822 (1158)
T 3ei3_A          745 Q--EVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHA  822 (1158)
T ss_dssp             E--GGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEE
T ss_pred             c--CCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEE
Confidence            5  3333322211                                                 013477888777776655


Q ss_pred             eecc-cCceEEEe---eeC---cEEEEEe----------cCCcEEEEEccCccCCCceeeeecCCCCceEEEE
Q psy7482         266 IKAS-ASRIKGLA---SHR---NHLICIT----------SAGDLVVWELNEDVTREPQRVSATNDGCRFTCLA  321 (327)
Q Consensus       266 ~~~~-~~~v~~~~---~~~---~~l~~~~----------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~  321 (327)
                      +.-. .+.+.+++   |..   .+++.|+          ..|.|++|++...   +.+.+......+.+++|+
T Consensus       823 ~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~---kL~lv~~~~v~g~v~al~  892 (1158)
T 3ei3_A          823 HQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG---KLQTVAEKEVKGAVYSMV  892 (1158)
T ss_dssp             EECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT---EEEEEEEEEESSCEEEEE
T ss_pred             EeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC---EEEEEEEEEcCCcCEEEe
Confidence            5422 23455554   332   6888876          3478999999844   555555555566777765

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.48  E-value=0.00057  Score=60.16  Aligned_cols=196  Identities=12%  Similarity=0.031  Sum_probs=110.9

Q ss_pred             ccEEEEEe--CCC-EEEEecCCCeEEEEEcccccc-ccccccccccEEEEEECCCCCe-EEEecCCCcEEEEEcCCCeEE
Q psy7482          15 ASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQ-SGALMQHEGTITCLKFTPEGSH-LISCSDDGSIAIFRVGSWQLE   89 (327)
Q Consensus        15 ~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iw~~~~~~~~   89 (327)
                      .....|++  .++ ++++-...+.|..+++..... ...+...-.....+++.+.+.. .++-...+.|.+.++.... .
T Consensus        40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~  118 (619)
T 3s94_A           40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-R  118 (619)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-C
T ss_pred             CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-E
Confidence            34567777  334 444544567788888765432 2222222356788999985554 4455567899999987543 3


Q ss_pred             EeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C
Q psy7482          90 KLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q  165 (327)
Q Consensus        90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~  165 (327)
                      ..+....... ...+++.|.+..|+....  .+.|...++..... ..+....    ......+++++++..|..+.  .
T Consensus       119 ~~l~~~~l~~-P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~----~~~P~Glald~~~~~LY~aD~~~  192 (619)
T 3s94_A          119 KVLFWQELDQ-PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSE----IYWPNGLTLDYEEQKLYWADAKL  192 (619)
T ss_dssp             EEEECSSCSC-CCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSS----CSSEEEEEEETTTTEEEEEETTT
T ss_pred             EEEEeCCCCC-CceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEeCC----CCCCcEEEEEccCCEEEEEeCCC
Confidence            3331333444 789999997666665553  35677777653322 2221111    12378999999766665554  6


Q ss_pred             CeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCc
Q psy7482         166 NKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGS  217 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~  217 (327)
                      +.|..+|+.......... .......+++..+..+++-...+.|...|..+++
T Consensus       193 ~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~  245 (619)
T 3s94_A          193 NFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGE  245 (619)
T ss_dssp             CCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCC
T ss_pred             CeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCc
Confidence            788888886544333222 1223345666666555565566777777765543

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.48  E-value=2.4e-06  Score=76.38  Aligned_cols=236  Identities=7%  Similarity=-0.004  Sum_probs=136.9

Q ss_pred             CCeEEEEEccccccccccccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCC----CeEEEeEEecccCCceeeEEEe
Q psy7482          33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGS----WQLEKLFKKAHKGTAVNHISIH  107 (327)
Q Consensus        33 dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~----~~~~~~~~~~~~~~~v~~~~~~  107 (327)
                      .+.|+..++...+....+.. ...+..++|.+.+..|+.+ ...+.|+.+++..    ......+ ...... ...+++.
T Consensus       385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-~~~~~~-P~glavD  461 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQA-PDGLAVD  461 (699)
T ss_dssp             TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-CSCC---CCCEECC
T ss_pred             ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-eCCCCC-cceEEEE
Confidence            35688888776654444433 2346688999876666655 4467899998875    2222222 111223 5678887


Q ss_pred             cCC-CEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--C-CeEEEEEecCCceeeEec
Q psy7482         108 PSG-KLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--Q-NKAVVFSVEKAGVLQTLK  183 (327)
Q Consensus       108 ~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~-~~i~i~d~~~~~~~~~~~  183 (327)
                      +.+ +++++-...+.|.++++............     ......++++|.+..|..+.  . +.|..+++........+.
T Consensus       462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~-----~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~  536 (699)
T 1n7d_A          462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQ-----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT  536 (699)
T ss_dssp             CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCS-----SCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC
T ss_pred             eeCCcEEEEeccCCeEEEEecCCCceEEEEeCC-----CCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe
Confidence            644 44444445688999998754332222111     12267889999665444443  2 678877765433222222


Q ss_pred             -CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCceeEEee--ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         184 -SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSHLWQIK--ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       184 -~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                       .-.....|+++|+ + ++++-...+.|..+++........+.  ........|++.  . +.++++....+.|..++..
T Consensus       537 ~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd--~-~~lywtd~~~~~V~~~d~~  613 (699)
T 1n7d_A          537 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--E-DKVFWTDIINEAIFSANRL  613 (699)
T ss_dssp             SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEE--T-TEEEEECSTTTCEEEEETT
T ss_pred             CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEE--C-CEEEEEeCCCCeEEEEEcc
Confidence             2345678999986 4 45566677889999986433222222  112234456663  3 4566666677899999988


Q ss_pred             CCceeEEeecccCceEEEeee
Q psy7482         259 DGSHLWHIKASASRIKGLASH  279 (327)
Q Consensus       259 ~~~~~~~~~~~~~~v~~~~~~  279 (327)
                      +++.+..+........+|++.
T Consensus       614 ~G~~~~~i~~~~~~P~~i~v~  634 (699)
T 1n7d_A          614 TGSDVNLLAENLLSPEDMVLF  634 (699)
T ss_dssp             TEEEEECCCTTCSSCCCCCBC
T ss_pred             CCCceEEeecCCCCCcEEEEe
Confidence            888777765443344555443

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.45  E-value=0.00045  Score=60.83  Aligned_cols=222  Identities=11%  Similarity=0.035  Sum_probs=125.0

Q ss_pred             CCeEEEEEccccc-cccccccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCC
Q psy7482          33 DETVVLYDMVKRK-QSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG  110 (327)
Q Consensus        33 dg~v~~w~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  110 (327)
                      ...|+..++.... ....+...-.....++|++.+..|+.+ ...+.|..++++.......+....... ...+++.+.+
T Consensus        17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~-P~GlAvD~~~   95 (619)
T 3s94_A           17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLS-PDGLACDWLG   95 (619)
T ss_dssp             SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSC-EEEEEEETTT
T ss_pred             cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCC-cCeEEEEecC
Confidence            4567888876543 122222233457899999866666654 446788888887543222221222244 8899999865


Q ss_pred             CEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCCceeeEec-CC
Q psy7482         111 KLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVLQTLK-SE  185 (327)
Q Consensus       111 ~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~~~~~-~~  185 (327)
                      ..|+.+ ...+.|.+.++......... ...    ......+++.|.+..|..+.   .+.|...++.......... .-
T Consensus        96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~-~~~----l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~  170 (619)
T 3s94_A           96 EKLYWTDSETNRIEVSNLDGSLRKVLF-WQE----LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI  170 (619)
T ss_dssp             TEEEEEETTTTEEEEEETTSCSCEEEE-CSS----CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC
T ss_pred             CEEEEEeCCCCEEEEEECCCCCEEEEE-eCC----CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCC
Confidence            555554 45688999998754332222 111    12377899999755444443   4577777765433333332 34


Q ss_pred             CceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482         186 SKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       186 ~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                      .....++++++ +. +++-...+.|..+|+..........+.......+++.   .+..+++-...+.|...|..+++..
T Consensus       171 ~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~---~~~ly~td~~~~~V~~~d~~tg~~~  247 (619)
T 3s94_A          171 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF---EDILYWTDWSTHSILACNKYTGEGL  247 (619)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEES---SSEEEEECTTTCSEEEEESSSCCCC
T ss_pred             CCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEe---CCEEEEecCCCCEEEEEECCCCccc
Confidence            56889999986 54 4555667889999886543322222122223566762   3355556666788999998776543

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=98.44  E-value=0.00024  Score=56.54  Aligned_cols=228  Identities=14%  Similarity=0.142  Sum_probs=121.4

Q ss_pred             eCCCEEEEec-CC-----CeEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecCC-----CcEEEEEcCCCe-
Q psy7482          22 ATSKLAASSG-AD-----ETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQ-   87 (327)
Q Consensus        22 ~~~~~l~~~~-~d-----g~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~-   87 (327)
                      +++.+++.|+ .+     ..+.+||+.+++...  .+.........+..  ++..++.|+.+     ..+.+||..+.+ 
T Consensus        13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~~   90 (301)
T 2vpj_A           13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADED   90 (301)
T ss_dssp             CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred             CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence            4667777777 33     368899987765322  22211111122222  46677777755     468999987755 


Q ss_pred             --EEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE
Q psy7482          88 --LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY  160 (327)
Q Consensus        88 --~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  160 (327)
                        ....- ...... -...+...+++.++.|+.+     ..+.+||+.+.+.......+....   ....+.+  +++++
T Consensus        91 ~~W~~~~-~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~~--~~~iy  163 (301)
T 2vpj_A           91 GVWYSVA-PMNVRR-GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTARE---GAGLVVA--SGVIY  163 (301)
T ss_dssp             CCCEEEC-CCSSCC-BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCB---SCEEEEE--TTEEE
T ss_pred             CeeEECC-CCCCCc-cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcc---cceEEEE--CCEEE
Confidence              32221 111111 1111222256677777653     358899988877655443333211   1222222  66777


Q ss_pred             Eeec-C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeEEeeeccc
Q psy7482         161 AIPI-Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLWQIKASAS  227 (327)
Q Consensus       161 ~~~~-~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~  227 (327)
                      +.|+ +     ..+.+||..+.+-...  +.....-.+++...+..++.|+.+     ..+.+||+.+.+-...-.....
T Consensus       164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~  243 (301)
T 2vpj_A          164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP  243 (301)
T ss_dssp             EECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred             EECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence            7664 2     4688999887654332  222222233444445667777653     5689999987643221111111


Q ss_pred             -ceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCc
Q psy7482         228 -RIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGS  261 (327)
Q Consensus       228 -~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~  261 (327)
                       .-.+++.   .+++.++.|+.+     ..+.+||+.+.+
T Consensus       244 r~~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          244 RCYVGATV---LRGRLYAIAGYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             CBSCEEEE---ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred             ccceeEEE---ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence             1112222   467777777765     457888887654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.43  E-value=2e-06  Score=76.84  Aligned_cols=212  Identities=10%  Similarity=0.030  Sum_probs=123.7

Q ss_pred             cEEEEEe--CCCEEE-EecCCCeEEEEEccc----cccccccccccccEEEEEECCCC-CeEEEecCCCcEEEEEcCCCe
Q psy7482          16 SVRSVAA--TSKLAA-SSGADETVVLYDMVK----RKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        16 ~v~~~~~--~~~~l~-~~~~dg~v~~w~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      .+..|+|  .++.|+ +-...+.|+.+++..    ......+.........|++.+.+ +++++-...+.|.+.++....
T Consensus       407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~  486 (699)
T 1n7d_A          407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK  486 (699)
T ss_dssp             TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred             ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence            3446666  344444 444567888888765    22222222122234567887544 444554567789999987544


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I  164 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~  164 (327)
                      ....+ ...... ...+++.|.+..|+.+..  .+.|..+++..... ..+....    ......|+|+|++..|..+ .
T Consensus       487 ~~~l~-~~~~~~-P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~----l~~PnGlavd~~~~~LY~aD~  559 (699)
T 1n7d_A          487 RKTLF-REQGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTEN----IQWPNGITLDLLSGRLYWVDS  559 (699)
T ss_dssp             EEEEC-CCSSCC-CCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSS----CSSCCCEEECTTTCCEEEEET
T ss_pred             eEEEE-eCCCCC-cceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCC----CCCccEEEEeccCCEEEEEec
Confidence            33333 222233 688899986655555442  26788887753322 2211111    1236789999976555544 3


Q ss_pred             -CCeEEEEEecCCceeeEec---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482         165 -QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF  234 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  234 (327)
                       .+.|..+++........+.   .......+++..+.++++....+.|..++..+++.+..+.........|++
T Consensus       560 ~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v  633 (699)
T 1n7d_A          560 KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL  633 (699)
T ss_dssp             TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCB
T ss_pred             CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEE
Confidence             6789999986543332222   123455677777777778888899999998888877766543333444544

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.39  E-value=0.00052  Score=55.98  Aligned_cols=215  Identities=14%  Similarity=0.222  Sum_probs=114.4

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe--EE--ecccCCceeeEEEecC---CCEEEEEeC-C-----CCE
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL--FK--KAHKGTAVNHISIHPS---GKLALSVGK-D-----KTL  122 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~--~~--~~~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~i  122 (327)
                      ....++|.|+|+++++ ..+|.|.+++  .++....  +.  ...... ...++++|+   +..|+.+.. .     +.|
T Consensus        32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~-p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v  107 (352)
T 2ism_A           32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESG-LLGLALHPRFPQEPYVYAYRTVAEGGLRNQV  107 (352)
T ss_dssp             CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCS-EEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred             CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCC-ceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence            4678999999985554 5568999998  4442211  10  111234 889999998   555555443 2     578


Q ss_pred             EEEEcCCCce---eeeee-cc--ccCccccceEEEEEccCCcEEEeecC--------------CeEEEEEecCC------
Q psy7482         123 RTWNLVKGRS---AYITN-LS--SYGVGFENLDSVVWSPEGLLYAIPIQ--------------NKAVVFSVEKA------  176 (327)
Q Consensus       123 ~iwd~~~~~~---~~~~~-~~--~~~~~~~~v~~~~~~~~~~~l~~~~~--------------~~i~i~d~~~~------  176 (327)
                      ..++...+..   ...+. .+  ....|  ....++|.|+|.++++..+              +.|.-++....      
T Consensus       108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h--~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np  185 (352)
T 2ism_A          108 VRLRHLGERGVLDRVVLDGIPARPHGLH--SGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP  185 (352)
T ss_dssp             EEEEECSSCEEEEEEEEEEECCCTTCCC--CCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred             EEEEeCCCCcCceEEEEEeCCCCCCCCc--CCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence            8888764321   11111 22  11112  2568999999987766432              45666665431      


Q ss_pred             ------ceeeEec-CCCceeEEEeec-CceEEEeCCC-CcE------EEEEcCCCc------------------eeEEee
Q psy7482         177 ------GVLQTLK-SESKVHSVCFLN-ETTVCTGNEE-SAI------TAYNLTDGS------------------HLWQIK  223 (327)
Q Consensus       177 ------~~~~~~~-~~~~i~~~~~~~-~~~l~~~~~d-~~i------~i~d~~~~~------------------~~~~~~  223 (327)
                            .....+. .......++|+| ++.|+++... ..+      .+.-+..+.                  ++..+.
T Consensus       186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~  265 (352)
T 2ism_A          186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP  265 (352)
T ss_dssp             TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred             ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence                  1111121 223467788999 4555554322 221      122222222                  222222


Q ss_pred             ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce------eEEeecccCceEEEeeeC
Q psy7482         224 ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH------LWHIKASASRIKGLASHR  280 (327)
Q Consensus       224 ~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~------~~~~~~~~~~v~~~~~~~  280 (327)
                       +......++|   .+|.++++.-..+.|...++.....      ...+......+..+++.|
T Consensus       266 -~~~ap~G~~~---~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p  324 (352)
T 2ism_A          266 -QGFPPGNLAF---FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGP  324 (352)
T ss_dssp             -TCCCEEEEEE---ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECT
T ss_pred             -CCCCCcceEE---ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECC
Confidence             2224567777   4677777766777888877764321      112212224566677666

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.39  E-value=0.00071  Score=57.29  Aligned_cols=236  Identities=16%  Similarity=0.169  Sum_probs=135.0

Q ss_pred             EEEEEeC----CCEEEEecCCCeEEEEEcccccccccccc---ccccEEEEEE-------CCCCCeEEEecCCC------
Q psy7482          17 VRSVAAT----SKLAASSGADETVVLYDMVKRKQSGALMQ---HEGTITCLKF-------TPEGSHLISCSDDG------   76 (327)
Q Consensus        17 v~~~~~~----~~~l~~~~~dg~v~~w~~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~~~~~d~------   76 (327)
                      ...|+++    ++++++-...+.|++.|++++.....+..   .......++|       +++++.|+++...+      
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~  220 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES  220 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence            4567774    33444444456788899887665543332   2235889999       99999666665543      


Q ss_pred             -cEEEEEcCC-CeEE-----EeEEecccCCceeeEEEecC-CCEEEEEeCCCCEEEEEcC-------CCce---------
Q psy7482          77 -SIAIFRVGS-WQLE-----KLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLV-------KGRS---------  132 (327)
Q Consensus        77 -~i~iw~~~~-~~~~-----~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~-------~~~~---------  132 (327)
                       .|.+.+... +...     ..+ .. ... ...++++|+ +.++++-..++.|..+|+.       ++..         
T Consensus       221 ~~V~~i~r~~~G~~~~~~~~~~v-~~-~~~-p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~  297 (496)
T 3kya_A          221 PSVYIIKRNADGTFDDRSDIQLI-AA-YKQ-CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP  297 (496)
T ss_dssp             EEEEEEECCTTSCCSTTSCEEEE-EE-ESC-CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred             ceEEEEecCCCCceeecccceee-cc-CCC-ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence             255665433 2321     233 11 223 577899995 4545555567889999987       4543         


Q ss_pred             --e-eeeeccccCccccceEEEEEccCCcEEEee-c-CCeEEEEEecC--Cce--eeEec-C---C------------Cc
Q psy7482         133 --A-YITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-QNKAVVFSVEK--AGV--LQTLK-S---E------------SK  187 (327)
Q Consensus       133 --~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~d~~~--~~~--~~~~~-~---~------------~~  187 (327)
                        . .......    ......++|+|+++.|..+ . .+.|+.++...  +..  ...+. .   .            ..
T Consensus       298 g~~~~l~~~~~----~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~  373 (496)
T 3kya_A          298 NTFKQLFTIAD----PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN  373 (496)
T ss_dssp             TTEEEEEECSS----SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred             cccceeEecCC----CCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence              0 1111211    1236789999999955444 3 78898876543  221  01111 0   0            12


Q ss_pred             ee-EEEee-------cC-ceEEEeCCCCcEEEEEcCCCceeEEeeecc------------------------cceEEEEE
Q psy7482         188 VH-SVCFL-------NE-TTVCTGNEESAITAYNLTDGSHLWQIKASA------------------------SRIKGLVF  234 (327)
Q Consensus       188 i~-~~~~~-------~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------------------~~v~~~~~  234 (327)
                      .. .++..       ++ .++++-.....|+.++ .++ .+.++.+..                        .....|++
T Consensus       374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav  451 (496)
T 3kya_A          374 PCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY  451 (496)
T ss_dssp             EEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred             CeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence            34 44554       34 4555556778899988 455 344443320                        12456777


Q ss_pred             EecCC-CcEEEEecCCCeEEEEEcCCCcee
Q psy7482         235 FSIPQ-ETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       235 ~~s~~-~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                      .  ++ +.++++=.....|+.++++....+
T Consensus       452 d--~~~g~lyVaD~~N~rIrki~~~~~~~~  479 (496)
T 3kya_A          452 D--DVKEMFYVHDQVGHTIRTISMEQEENV  479 (496)
T ss_dssp             E--TTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred             E--CCCCEEEEEeCCCCEEEEEECCCCccc
Confidence            4  54 666666666777888887665444

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.39  E-value=0.00045  Score=54.87  Aligned_cols=199  Identities=10%  Similarity=0.088  Sum_probs=122.1

Q ss_pred             EEEEEECCCCCeEEEe-cCCCcEEEEEcCCCeEEEeEEecc------cCCceeeEEE---ecCCCEEEEEeC--------
Q psy7482          57 ITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEKLFKKAH------KGTAVNHISI---HPSGKLALSVGK--------  118 (327)
Q Consensus        57 v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~------~~~~v~~~~~---~~~~~~l~~~~~--------  118 (327)
                      -.+++|.+....|..+ -..++|..|+...+...... ...      ....+..+.|   .|+++++++...        
T Consensus        15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~-~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g   93 (334)
T 2p9w_A           15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV-IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD   93 (334)
T ss_dssp             CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC-CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred             CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe-cCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence            4567898755555544 47999999999765443332 222      1112678999   588777765432        


Q ss_pred             -----CCCEEEEEcC---CCceeeeeeccccCc--------cccceEEEEEccCCcEEEeec-C-CeEEEEEecCCceee
Q psy7482         119 -----DKTLRTWNLV---KGRSAYITNLSSYGV--------GFENLDSVVWSPEGLLYAIPI-Q-NKAVVFSVEKAGVLQ  180 (327)
Q Consensus       119 -----dg~i~iwd~~---~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~-~-~~i~i~d~~~~~~~~  180 (327)
                           +..|..+|+.   +++.+....+.....        .......++..++|+..++++ . +.|..++.... ...
T Consensus        94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~  172 (334)
T 2p9w_A           94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS  172 (334)
T ss_dssp             CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred             cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence                 5779999999   788777666543211        112388999999999988876 6 78777776543 222


Q ss_pred             Eec-------CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCcee-EEee--ec---ccceEEE-EEEecCCCcE-EE
Q psy7482         181 TLK-------SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHL-WQIK--AS---ASRIKGL-VFFSIPQETT-VC  244 (327)
Q Consensus       181 ~~~-------~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~-~~~~--~~---~~~v~~~-~~~~s~~~~~-l~  244 (327)
                      .+.       .....+.|+++|+ ..|++....|.+..+|+...... ....  +.   -.....+ ...  .+|+. ++
T Consensus       173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~--~~G~vllV  250 (334)
T 2p9w_A          173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVP--VGNESVLV  250 (334)
T ss_dssp             EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEE--ETTEEEEE
T ss_pred             eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccc--cCCEEEEE
Confidence            221       1223679999998 56666666999999998843220 1111  21   1122333 221  36776 45


Q ss_pred             EecCCCeEEEEEcCC
Q psy7482         245 TGNEESAITAYNLTD  259 (327)
Q Consensus       245 ~~~~d~~i~i~d~~~  259 (327)
                      +.+..+.+.+.+...
T Consensus       251 ~~~~~~~~~l~S~Dg  265 (334)
T 2p9w_A          251 GARAPYAISFRSWDN  265 (334)
T ss_dssp             EEETTEEEEEECSST
T ss_pred             EcCCCCEEEEECCCC
Confidence            555566666665444

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.38  E-value=0.00074  Score=57.19  Aligned_cols=235  Identities=10%  Similarity=0.112  Sum_probs=135.6

Q ss_pred             EEEEEECC-CCCeEEEec-CCCcEEEEEcCCCeEEEeEEecc--cCCceeeEEE-------ecCCCEEEEEeCCC-C---
Q psy7482          57 ITCLKFTP-EGSHLISCS-DDGSIAIFRVGSWQLEKLFKKAH--KGTAVNHISI-------HPSGKLALSVGKDK-T---  121 (327)
Q Consensus        57 v~~~~~~~-~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~--~~~~v~~~~~-------~~~~~~l~~~~~dg-~---  121 (327)
                      ...|+|.| ++..|+.+. ..+.|++.|.+++........+.  ... ...++|       +++++.|+++...+ .   
T Consensus       141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~-p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~  219 (496)
T 3kya_A          141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNR-IRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE  219 (496)
T ss_dssp             EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSB-EEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred             CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCC-CcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence            56899998 344454444 34678889988877665552211  123 789999       99998777776554 2   


Q ss_pred             ---EEEEEcCC-Ccee-----eeeeccccCccccceEEEEEccCC-cEEEeec-CCeEEEEEec-------CCce-----
Q psy7482         122 ---LRTWNLVK-GRSA-----YITNLSSYGVGFENLDSVVWSPEG-LLYAIPI-QNKAVVFSVE-------KAGV-----  178 (327)
Q Consensus       122 ---i~iwd~~~-~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~-~~~i~i~d~~-------~~~~-----  178 (327)
                         +.+++... +...     ....  ..    .....++.+|++ .++++.. ++.|..+|+.       ++..     
T Consensus       220 ~~~V~~i~r~~~G~~~~~~~~~~v~--~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~  293 (496)
T 3kya_A          220 SPSVYIIKRNADGTFDDRSDIQLIA--AY----KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV  293 (496)
T ss_dssp             EEEEEEEECCTTSCCSTTSCEEEEE--EE----SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred             CceEEEEecCCCCceeecccceeec--cC----CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence               66665333 2221     1111  11    126678899955 4444444 7889999987       4543     


Q ss_pred             ---------eeEecCCCceeEEEeecC-c-eEEEeCCCCcEEEEEcC--CCce--eEEeeec---c------------cc
Q psy7482         179 ---------LQTLKSESKVHSVCFLNE-T-TVCTGNEESAITAYNLT--DGSH--LWQIKAS---A------------SR  228 (327)
Q Consensus       179 ---------~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~--~~~~--~~~~~~~---~------------~~  228 (327)
                               +...........++|+|+ + ++++-.....|+.++..  .+..  ...+.+.   .            ..
T Consensus       294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~  373 (496)
T 3kya_A          294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN  373 (496)
T ss_dssp             GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred             cccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence                     112223455789999999 5 35555677889886653  2221  1222221   0            11


Q ss_pred             eEEEEEEec------CCCcEEEEecCCCeEEEEEcCCCceeEEeecc------------------------cCceEEEee
Q psy7482         229 IKGLVFFSI------PQETTVCTGNEESAITAYNLTDGSHLWHIKAS------------------------ASRIKGLAS  278 (327)
Q Consensus       229 v~~~~~~~s------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------------------------~~~v~~~~~  278 (327)
                      .....+...      +++.++++-.....|+.++ .++. +.++.+.                        -.....|++
T Consensus       374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav  451 (496)
T 3kya_A          374 PCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY  451 (496)
T ss_dssp             EEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred             CeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence            231333211      3466666666778899998 4553 4444322                        023567777


Q ss_pred             eC--cEEEEEe-cCCcEEEEEccCc
Q psy7482         279 HR--NHLICIT-SAGDLVVWELNED  300 (327)
Q Consensus       279 ~~--~~l~~~~-~dg~v~iw~~~~~  300 (327)
                      ++  ..|+.+. ....||.++++..
T Consensus       452 d~~~g~lyVaD~~N~rIrki~~~~~  476 (496)
T 3kya_A          452 DDVKEMFYVHDQVGHTIRTISMEQE  476 (496)
T ss_dssp             ETTTTEEEEEETTTTEEEEEEECCC
T ss_pred             ECCCCEEEEEeCCCCEEEEEECCCC
Confidence            76  3444444 3456777777665

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=98.37  E-value=0.00033  Score=55.79  Aligned_cols=227  Identities=13%  Similarity=0.146  Sum_probs=119.4

Q ss_pred             eCCCEEEEecCC----CeEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecCC-----CcEEEEEcCCCeEEE
Q psy7482          22 ATSKLAASSGAD----ETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQLEK   90 (327)
Q Consensus        22 ~~~~~l~~~~~d----g~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw~~~~~~~~~   90 (327)
                      +++.+++.|+.+    ..+..||+.+.+...  .+......-..+.+  ++..++.|+.+     ..+.+||..+.+...
T Consensus        14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~   91 (302)
T 2xn4_A           14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS   91 (302)
T ss_dssp             -CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred             CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceee
Confidence            356677777754    458889987764322  12111111112222  56677777754     358899988765443


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCC-----CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDK-----TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-  164 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  164 (327)
                      .- ...... ....+..-+++.++.|+.++     .+.+||+.+.+.......+...   .....+.  -++++++.|+ 
T Consensus        92 ~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---~~~~~~~--~~~~iyv~GG~  164 (302)
T 2xn4_A           92 VA-NMRDRR-STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR---SSVGVGV--VGGLLYAVGGY  164 (302)
T ss_dssp             EC-CCSSCC-BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC---BSCEEEE--ETTEEEEECCE
T ss_pred             CC-CCCccc-cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc---cCceEEE--ECCEEEEEeCC
Confidence            32 111111 11112223567777777653     4778898877665443333221   1122222  2566766664 


Q ss_pred             C-------CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeEE--eeecccc
Q psy7482         165 Q-------NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLWQ--IKASASR  228 (327)
Q Consensus       165 ~-------~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~  228 (327)
                      +       ..+.+||..+.+-...  +.....-.+++...+.+++.|+.+     ..+.+||+.+.+-...  +..... 
T Consensus       165 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~-  243 (302)
T 2xn4_A          165 DVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR-  243 (302)
T ss_dssp             ETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB-
T ss_pred             CCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc-
Confidence            2       3588899887653332  222222234444445677777654     4688999877643221  111111 


Q ss_pred             eEEEEEEecCCCcEEEEecCCC-----eEEEEEcCCCc
Q psy7482         229 IKGLVFFSIPQETTVCTGNEES-----AITAYNLTDGS  261 (327)
Q Consensus       229 v~~~~~~~s~~~~~l~~~~~d~-----~i~i~d~~~~~  261 (327)
                      -..++.   .+++.++.|+.++     .+.+||+.+.+
T Consensus       244 ~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          244 NAGVCA---VNGLLYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             SCEEEE---ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             cCeEEE---ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence            112232   4677777777653     47888887654

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=98.36  E-value=0.00039  Score=55.34  Aligned_cols=226  Identities=8%  Similarity=0.096  Sum_probs=118.8

Q ss_pred             CCCeEEEec-CC-----CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCc--
Q psy7482          65 EGSHLISCS-DD-----GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGR--  131 (327)
Q Consensus        65 ~~~~l~~~~-~d-----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~--  131 (327)
                      ++..++.|+ .+     ..+.+||..+.+....- ...... ........++.+++.|+.+     ..+.+||+.+.+  
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r-~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~   91 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLP-SITRKR-RYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG   91 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETTTTEEEECC-CCSSCC-BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCC-CCChhh-ccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence            455666666 33     36889998876543321 111111 1222223356677777754     468999998876  


Q ss_pred             -eeeeeeccccCccccceEEEEEccCCcEEEeec-C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEe
Q psy7482         132 -SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTG  202 (327)
Q Consensus       132 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~  202 (327)
                       .......+...   .....+..  ++++++.|+ +     ..+.+||..+.+-...  +.....-.+++...+..++.|
T Consensus        92 ~W~~~~~~p~~r---~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G  166 (301)
T 2vpj_A           92 VWYSVAPMNVRR---GLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLG  166 (301)
T ss_dssp             CCEEECCCSSCC---BSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEEC
T ss_pred             eeEECCCCCCCc---cceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEEC
Confidence             44433332221   11222222  567777664 2     4688999887653332  222222233333444666676


Q ss_pred             CCC-----CcEEEEEcCCCceeEEeeeccc-ceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCceeE--Eeecc
Q psy7482         203 NEE-----SAITAYNLTDGSHLWQIKASAS-RIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGSHLW--HIKAS  269 (327)
Q Consensus       203 ~~d-----~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~--~~~~~  269 (327)
                      +.+     ..+.+||+.+.+-...-..... .-.+++.   .+++.++.|+.+     ..+.+||+.+.+-..  .+...
T Consensus       167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~  243 (301)
T 2vpj_A          167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL---LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP  243 (301)
T ss_dssp             CBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE---ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred             CCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE---ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence            644     4688999877643221111111 1112232   367777887764     468999988765222  11111


Q ss_pred             cCceEEEeeeCcEEEEEecCC-----cEEEEEccCc
Q psy7482         270 ASRIKGLASHRNHLICITSAG-----DLVVWELNED  300 (327)
Q Consensus       270 ~~~v~~~~~~~~~l~~~~~dg-----~v~iw~~~~~  300 (327)
                      ......+.+...+++.|+.++     .+.+||+.+.
T Consensus       244 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred             ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence            111122233337777777653     4778888776

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=98.35  E-value=0.0015  Score=59.29  Aligned_cols=271  Identities=8%  Similarity=0.079  Sum_probs=150.4

Q ss_pred             CccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        14 ~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      ...|.++.. ....|..|+.+| +..||..+.+...........|.++.. .++ .|..++.+ -+..+|..+++.....
T Consensus        62 ~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~  137 (758)
T 3ott_A           62 NTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFD  137 (758)
T ss_dssp             SSCEEEEEEETTTEEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEEC
T ss_pred             CceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEec
Confidence            356888877 555677777666 788998766433211112335777654 344 46666655 5888998766543221


Q ss_pred             Ee--cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc-CccccceEEEEEccCCcEEEeecCCeEE
Q psy7482          93 KK--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY-GVGFENLDSVVWSPEGLLYAIPIQNKAV  169 (327)
Q Consensus        93 ~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~i~  169 (327)
                      ..  ......|.++....++.+.+ ++.+ -|..++..+++... ...... ......|.++...+++..|.+|+++.+.
T Consensus       138 ~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~  214 (758)
T 3ott_A          138 TRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLF  214 (758)
T ss_dssp             HHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEE
T ss_pred             cCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEECCCCe
Confidence            00  11122378887777776554 5554 48888877654322 111111 1112237888888777655555556788


Q ss_pred             EEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeee--------cccceEEEEEEecCCC
Q psy7482         170 VFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA--------SASRIKGLVFFSIPQE  240 (327)
Q Consensus       170 i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~~~s~~~  240 (327)
                      .+|..+++...... ....|.++...+++.|..|+.+ -+.+++..+++.. .+..        ....|.++..  +.+|
T Consensus       215 ~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~--D~~g  290 (758)
T 3ott_A          215 QYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFA--DQEH  290 (758)
T ss_dssp             EEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEE--CTTC
T ss_pred             EEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEE--cCCC
Confidence            89987665332211 2345788887777888888754 5788887665432 2211        1234777765  3455


Q ss_pred             cEEEEecCCCeEEEEEcCCCceeEEee-----cccCceEEEeeeC-cEEEEEecCCcEEEEEcc
Q psy7482         241 TTVCTGNEESAITAYNLTDGSHLWHIK-----ASASRIKGLASHR-NHLICITSAGDLVVWELN  298 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~  298 (327)
                      . |..|+..| +.++.....-......     .....|.++.-.. ..|..|+.+| +..++..
T Consensus       291 ~-lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~  351 (758)
T 3ott_A          291 N-IWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDP  351 (758)
T ss_dssp             C-EEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCT
T ss_pred             C-EEEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-ceeeccc
Confidence            4 44455556 5444322111111111     1123577777766 5666666554 5555544

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=98.30  E-value=0.00076  Score=53.68  Aligned_cols=224  Identities=13%  Similarity=0.166  Sum_probs=116.8

Q ss_pred             CCeEEEecCC----CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCceeeee
Q psy7482          66 GSHLISCSDD----GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAYIT  136 (327)
Q Consensus        66 ~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~  136 (327)
                      +..++.|+.+    ..+..||+.+.+....- ...... .......-++.+++.|+.+     ..+.+||..+.+.....
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~   93 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVA-ELPSRR-CRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA   93 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETTTTEEEEEC-CCSSCC-BSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred             CEEEEECCCCCCCCCcEEEEcCcCCcEeEcc-cCCccc-ccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence            4455566643    45888998876543321 111111 1111222356677777754     35889999887665444


Q ss_pred             eccccCccccceEEEEEccCCcEEEeec-C-----CeEEEEEecCCceeeEe--cCCCceeEEEeecCceEEEeCC----
Q psy7482         137 NLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGVLQTL--KSESKVHSVCFLNETTVCTGNE----  204 (327)
Q Consensus       137 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~~----  204 (327)
                      ..+....   ....+.+  ++++++.|+ +     ..+.+||..+.+-...-  .....-.+++...+..++.|+.    
T Consensus        94 ~~p~~r~---~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~  168 (302)
T 2xn4_A           94 NMRDRRS---TLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVAS  168 (302)
T ss_dssp             CCSSCCB---SCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTT
T ss_pred             CCCcccc---ceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCC
Confidence            3332211   1222222  566666664 3     35778888776533322  2222223344444466666654    


Q ss_pred             ---CCcEEEEEcCCCceeE--EeeecccceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCcee--EEeecccCc
Q psy7482         205 ---ESAITAYNLTDGSHLW--QIKASASRIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGSHL--WHIKASASR  272 (327)
Q Consensus       205 ---d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~--~~~~~~~~~  272 (327)
                         ...+.+||+.+.+-..  .+..... -.+++.   .++++++.|+.+     ..+.+||+.+.+-.  ..+......
T Consensus       169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~  244 (302)
T 2xn4_A          169 RQCLSTVECYNATTNEWTYIAEMSTRRS-GAGVGV---LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRN  244 (302)
T ss_dssp             TEECCCEEEEETTTTEEEEECCCSSCCB-SCEEEE---ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred             CccccEEEEEeCCCCcEEECCCCccccc-cccEEE---ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCcccc
Confidence               2458899987764322  1111111 112333   467788887764     36889998876522  111111111


Q ss_pred             eEEEeeeCcEEEEEecCC-----cEEEEEccCc
Q psy7482         273 IKGLASHRNHLICITSAG-----DLVVWELNED  300 (327)
Q Consensus       273 v~~~~~~~~~l~~~~~dg-----~v~iw~~~~~  300 (327)
                      -..+.+...+++.|+.++     .+.+||+.+.
T Consensus       245 ~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~  277 (302)
T 2xn4_A          245 AGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD  277 (302)
T ss_dssp             CEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred             CeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence            122223337777777654     4889998877

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=98.29  E-value=0.00081  Score=53.64  Aligned_cols=225  Identities=10%  Similarity=0.106  Sum_probs=120.2

Q ss_pred             CCEEEEecC--CCeEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecCC----CcEEEEEcCCCeEEEeEEec
Q psy7482          24 SKLAASSGA--DETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD----GSIAIFRVGSWQLEKLFKKA   95 (327)
Q Consensus        24 ~~~l~~~~~--dg~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~   95 (327)
                      +.+++.|+.  ...+.+||..+++...  .+......-.++.+  ++..++.|+.+    ..+.+||..+.+....- ..
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~-~~   88 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL-GP   88 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEE-CC
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECC-CC
Confidence            345556654  3568899988765322  22211111222222  56677777754    67889999887654332 11


Q ss_pred             ccCCceeeEEEecCCCEEEEEeCC------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-----
Q psy7482          96 HKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-----  164 (327)
Q Consensus        96 ~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----  164 (327)
                      .... .......-++++++.|+.+      ..+.+||+.+.+.......+....   ....+.  -++++++.|+     
T Consensus        89 p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~~~~~--~~~~iyv~GG~~~~~  162 (306)
T 3ii7_A           89 PTPR-DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC---SHGMVE--ANGLIYVCGGSLGNN  162 (306)
T ss_dssp             SSCC-BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB---SCEEEE--ETTEEEEECCEESCT
T ss_pred             Cccc-cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc---eeEEEE--ECCEEEEECCCCCCC
Confidence            1111 1122222367777777765      468899998876654433332211   122222  2567766664     


Q ss_pred             -----CCeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeE--EeeecccceE
Q psy7482         165 -----QNKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLW--QIKASASRIK  230 (327)
Q Consensus       165 -----~~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~--~~~~~~~~v~  230 (327)
                           -..+.+||..+.+-...  +.....-.+++...+.+++.|+.+     ..+.+||+.+.+-..  .+...... .
T Consensus       163 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~  241 (306)
T 3ii7_A          163 VSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVT-V  241 (306)
T ss_dssp             TTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSC-C
T ss_pred             CcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccc-e
Confidence                 23488899887653322  222222233444445667777643     468899987754221  11111111 1


Q ss_pred             EEEEEecCCCcEEEEecCC-----CeEEEEEcCCCc
Q psy7482         231 GLVFFSIPQETTVCTGNEE-----SAITAYNLTDGS  261 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~  261 (327)
                      .++.   -+++.++.|+.+     ..+.+||+.+.+
T Consensus       242 ~~~~---~~~~i~v~GG~~~~~~~~~~~~yd~~~~~  274 (306)
T 3ii7_A          242 KCAA---VGSIVYVLAGFQGVGRLGHILEYNTETDK  274 (306)
T ss_dssp             EEEE---ETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred             eEEE---ECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence            2222   367777887754     468888887764

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.28  E-value=0.003  Score=59.66  Aligned_cols=277  Identities=11%  Similarity=0.091  Sum_probs=155.2

Q ss_pred             CccEEEEEeC--------CCEEEEecC-CCeEEEEEcccccccccccc-ccccEEEEEEC--CCCCeEEEecCCCcEEEE
Q psy7482          14 TASVRSVAAT--------SKLAASSGA-DETVVLYDMVKRKQSGALMQ-HEGTITCLKFT--PEGSHLISCSDDGSIAIF   81 (327)
Q Consensus        14 ~~~v~~~~~~--------~~~l~~~~~-dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~d~~i~iw   81 (327)
                      ...|.|+++.        ++++|.|.. |++|+|+++.+.+.+....- ......++.+.  ....+|..|-.||.+.-+
T Consensus       553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~  632 (1158)
T 3ei3_A          553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF  632 (1158)
T ss_dssp             SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred             CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence            4579999981        478999986 99999999987655432211 11223333332  234578899999998766


Q ss_pred             EcC--CCeEEEe--EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccce-EEEEEccC
Q psy7482          82 RVG--SWQLEKL--FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENL-DSVVWSPE  156 (327)
Q Consensus        82 ~~~--~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~  156 (327)
                      .++  +++....  ...+.  .|+.-..+...+..-+.+..+....++.-+ ++. ...+....     .+ ....|+..
T Consensus       633 ~~d~~tg~l~d~r~~~LG~--~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l-~~s~l~~~-----~v~~~~~F~se  703 (1158)
T 3ei3_A          633 GLNIETGLLSDRKKVTLGT--QPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKL-VFSNVNLK-----EVNYMCPLNSD  703 (1158)
T ss_dssp             EECTTTCCEEEEEEEECCS--SCCEEEEEESSSCEEEEEESSSCEEEEESS-SSE-EEEEBSSS-----CCCEEEEECCS
T ss_pred             EEcCCCCccccceeEEcCC--CceEEEEEeeCCceeEEEECCCCEEEEEcC-Cce-EEeccChH-----HhceEeccCcc
Confidence            654  4544332  11222  225444444444433333445555555433 332 22222211     12 23345432


Q ss_pred             C--cEEEeecCCeEEEEEecCCc--eeeEecCCCceeEEEeecC-ceEEEeCC---------------------------
Q psy7482         157 G--LLYAIPIQNKAVVFSVEKAG--VLQTLKSESKVHSVCFLNE-TTVCTGNE---------------------------  204 (327)
Q Consensus       157 ~--~~l~~~~~~~i~i~d~~~~~--~~~~~~~~~~i~~~~~~~~-~~l~~~~~---------------------------  204 (327)
                      .  .-++..+++.++|..+...+  .++.+.....+..++++|+ +.++++..                           
T Consensus       704 ~~~~g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  783 (1158)
T 3ei3_A          704 GYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSV  783 (1158)
T ss_dssp             SSTTEEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEE
T ss_pred             cCCCcEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcc
Confidence            2  34445556678888775433  3445556778889999887 54433221                           


Q ss_pred             ----------------------CCcEEEEEcCCCceeEEeeec-ccceEEEEEEe--cCCCcEEEEec----------CC
Q psy7482         205 ----------------------ESAITAYNLTDGSHLWQIKAS-ASRIKGLVFFS--IPQETTVCTGN----------EE  249 (327)
Q Consensus       205 ----------------------d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~--s~~~~~l~~~~----------~d  249 (327)
                                            -+.|++.|..+.+.+..++-. ...+.+++...  +....++++|.          ..
T Consensus       784 ~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~  863 (1158)
T 3ei3_A          784 SSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQ  863 (1158)
T ss_dssp             CCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCC
T ss_pred             cccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCc
Confidence                                  123677777777766555322 23355555431  12246888775          34


Q ss_pred             CeEEEEEcCCCceeEEe-ecccCceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         250 SAITAYNLTDGSHLWHI-KASASRIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       250 ~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      |.|.+|++.+++..... ....+++++++--..+|++|- ..+|++|++...
T Consensus       864 Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~i-g~~l~vy~l~~~  914 (1158)
T 3ei3_A          864 GRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASI-NSTVRLYEWTTE  914 (1158)
T ss_dssp             EEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEE-TTEEEEEEECTT
T ss_pred             eEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEc-CCEEEEEECCCC
Confidence            88999999755422211 123578888875554554443 578999999865

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=98.24  E-value=0.00062  Score=54.39  Aligned_cols=226  Identities=12%  Similarity=0.137  Sum_probs=119.4

Q ss_pred             CCCEEEEecCC----CeEEEEEcccccccc--ccccccccEEEEEECCCCCeEEEecC----C-----CcEEEEEcCCCe
Q psy7482          23 TSKLAASSGAD----ETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSD----D-----GSIAIFRVGSWQ   87 (327)
Q Consensus        23 ~~~~l~~~~~d----g~v~~w~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----~~i~iw~~~~~~   87 (327)
                      ++.+++.|+.+    ..+.+||..+++...  .+......-..+.+  ++..++.|+.    +     ..+.+||..+.+
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~  101 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ  101 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence            77788888742    368899987765322  12111111122222  5667777775    2     468899988765


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCC-----CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      ....- ...... .......-++++++.|+.+     ..+.+||+.+.+.......+....   ....+.+  ++++++.
T Consensus       102 W~~~~-~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~~~~~~--~~~iyv~  174 (308)
T 1zgk_A          102 WSPCA-PMSVPR-NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI---GVGVAVL--NRLLYAV  174 (308)
T ss_dssp             EEECC-CCSSCC-BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB---SCEEEEE--TTEEEEE
T ss_pred             EeECC-CCCcCc-cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc---ceEEEEE--CCEEEEE
Confidence            43322 111111 1111122256677776643     468899998876554433332211   1222222  5677776


Q ss_pred             ec-C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeEE--eeeccc
Q psy7482         163 PI-Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLWQ--IKASAS  227 (327)
Q Consensus       163 ~~-~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~  227 (327)
                      |+ +     ..+.+||..+.+-...  +.....-.+++...+..++.|+.+     ..+.+||+.+.+-...  +.....
T Consensus       175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~  254 (308)
T 1zgk_A          175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS  254 (308)
T ss_dssp             CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB
T ss_pred             eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc
Confidence            64 2     4688999877653322  222222233444445677777654     5689999887643221  111111


Q ss_pred             ceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCc
Q psy7482         228 RIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGS  261 (327)
Q Consensus       228 ~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~  261 (327)
                       -.+++.   -++++++.|+.+     ..+.+||+.+.+
T Consensus       255 -~~~~~~---~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          255 -ALGITV---HQGRIYVLGGYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             -SCEEEE---ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred             -ceEEEE---ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence             112333   367777777754     357788877654

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.23  E-value=0.00073  Score=53.68  Aligned_cols=169  Identities=8%  Similarity=0.010  Sum_probs=109.3

Q ss_pred             eeeeccCCccEEEEEeC---CCEEEEecCCCeEEEEEcccccccc-cccc----c--cccEEEEEE---CCCCCeEEEec
Q psy7482           7 TFVTHSHTASVRSVAAT---SKLAASSGADETVVLYDMVKRKQSG-ALMQ----H--EGTITCLKF---TPEGSHLISCS   73 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~~---~~~l~~~~~dg~v~~w~~~~~~~~~-~~~~----~--~~~v~~~~~---~~~~~~l~~~~   73 (327)
                      .+.+++...--.+.+|+   +.++++.-..++|..||...+.... .+.+    .  ...+..+.|   .|+++++++..
T Consensus         5 ~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~   84 (334)
T 2p9w_A            5 QIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMK   84 (334)
T ss_dssp             EEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEE
T ss_pred             eEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEc
Confidence            34445555555677883   5555555589999999987553222 2322    1  124689999   58877777543


Q ss_pred             -------------CCCcEEEEEcC---CCeEEEeEEec-c----------cCCceeeEEEecCCCEEEEEeCC-CCEEEE
Q psy7482          74 -------------DDGSIAIFRVG---SWQLEKLFKKA-H----------KGTAVNHISIHPSGKLALSVGKD-KTLRTW  125 (327)
Q Consensus        74 -------------~d~~i~iw~~~---~~~~~~~~~~~-~----------~~~~v~~~~~~~~~~~l~~~~~d-g~i~iw  125 (327)
                                   .+..|..+|+.   +++........ .          .-.....++..++|+..++++.. +.|...
T Consensus        85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV  164 (334)
T 2p9w_A           85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARV  164 (334)
T ss_dssp             ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEE
T ss_pred             ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEE
Confidence                         25779999998   77766555211 1          11127899999999999988887 887777


Q ss_pred             EcCCCceeeeeeccc-cCccccceEEEEEccCCcEEEeec-CCeEEEEEecCC
Q psy7482         126 NLVKGRSAYITNLSS-YGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKA  176 (327)
Q Consensus       126 d~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~  176 (327)
                      +.... ....+.... ........+.++++|++.+|++.. .+.+..+|+...
T Consensus       165 ~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          165 SADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP  216 (334)
T ss_dssp             CTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred             eCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence            76533 322222111 111122367999999998887775 899999998843

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.18  E-value=0.0017  Score=52.94  Aligned_cols=218  Identities=11%  Similarity=0.121  Sum_probs=116.5

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe-EEEeEE--ecccCCceeeEEEecC---CCEEEEEeC----C----C
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-LEKLFK--KAHKGTAVNHISIHPS---GKLALSVGK----D----K  120 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~--~~~~~~~v~~~~~~~~---~~~l~~~~~----d----g  120 (327)
                      .....++|.|+|++++ +..+|.|.+++ .+++ .+..+.  ...... ...++++|+   +..|+.+..    +    +
T Consensus        29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g-~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~  105 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAG-LLGLALHPEFPKKSWVYLYASYFAEGGHIRN  105 (354)
T ss_dssp             SCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCS-EEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred             CCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCc-eeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence            3467899999998555 45568999887 3454 111110  111234 889999997   455555443    2    5


Q ss_pred             CEEEEEcCCC--c---eeeeee-ccccCccccceEEEEEccCCcEEEeecC--------------CeEEEEEecCC----
Q psy7482         121 TLRTWNLVKG--R---SAYITN-LSSYGVGFENLDSVVWSPEGLLYAIPIQ--------------NKAVVFSVEKA----  176 (327)
Q Consensus       121 ~i~iwd~~~~--~---~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------~~i~i~d~~~~----  176 (327)
                      .|..|+....  .   ....+. .+....|  ....+.|.|+|.++++..+              |.|.-++....    
T Consensus       106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~  183 (354)
T 3a9g_A          106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD  183 (354)
T ss_dssp             EEEEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred             EEEEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence            6778877654  1   111111 2211122  2567999999987776432              45655554321    


Q ss_pred             -----ceeeEecCCCceeEEEeec-CceEEEeCCCC----cEEEEEcCCCc------------------eeEEeeecccc
Q psy7482         177 -----GVLQTLKSESKVHSVCFLN-ETTVCTGNEES----AITAYNLTDGS------------------HLWQIKASASR  228 (327)
Q Consensus       177 -----~~~~~~~~~~~i~~~~~~~-~~~l~~~~~d~----~i~i~d~~~~~------------------~~~~~~~~~~~  228 (327)
                           ..+... .......++|+| ++.|+++....    .|.+..  .+.                  ++..+......
T Consensus       184 npf~~~~i~a~-G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~a  260 (354)
T 3a9g_A          184 NPFPNSPIWSY-GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWA  260 (354)
T ss_dssp             SSSTTCCEEEE-CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCC
T ss_pred             CCCCCCcEEEE-ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcC
Confidence                 011122 223456899999 46555543221    233322  211                  22222111234


Q ss_pred             eEEEEEEe-----cCCCcEEEEecCCCeEEEEEcCCC-cee--EEee-cccCceEEEeeeC
Q psy7482         229 IKGLVFFS-----IPQETTVCTGNEESAITAYNLTDG-SHL--WHIK-ASASRIKGLASHR  280 (327)
Q Consensus       229 v~~~~~~~-----s~~~~~l~~~~~d~~i~i~d~~~~-~~~--~~~~-~~~~~v~~~~~~~  280 (327)
                      ...++|..     ..+|.++++.-..+.|...++... +..  ..+. +....+..+++.|
T Consensus       261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~p  321 (354)
T 3a9g_A          261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDD  321 (354)
T ss_dssp             EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECT
T ss_pred             CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECC
Confidence            66777731     135677777777788888888753 221  2222 2234567777766

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=98.15  E-value=0.0017  Score=51.70  Aligned_cols=224  Identities=11%  Similarity=0.111  Sum_probs=118.5

Q ss_pred             CeEEEecC--CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC----CCEEEEEcCCCceeeeeeccc
Q psy7482          67 SHLISCSD--DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYITNLSS  140 (327)
Q Consensus        67 ~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~  140 (327)
                      .+++.|+.  ...+.+||..+.+-...- ...... .......-++.+++.|+.+    ..+.+||+.+.+.......+.
T Consensus        13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~-~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~   90 (306)
T 3ii7_A           13 YRIALFGGSQPQSCRYFNPKDYSWTDIR-CPFEKR-RDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT   90 (306)
T ss_dssp             EEEEEECCSSTTSEEEEETTTTEEEECC-CCSCCC-BSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred             eEEEEeCCCCCceEEEecCCCCCEecCC-CCCccc-ceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence            34555654  357899999886644321 111111 1112222356677777754    568899998877655443333


Q ss_pred             cCccccceEEEEEccCCcEEEeec-C------CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCC-------
Q psy7482         141 YGVGFENLDSVVWSPEGLLYAIPI-Q------NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNE-------  204 (327)
Q Consensus       141 ~~~~~~~v~~~~~~~~~~~l~~~~-~------~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~-------  204 (327)
                      ...   ....+.+  ++++++.|+ +      ..+.+||..+.+-...  +.....-.+++...+..++.|+.       
T Consensus        91 ~r~---~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~  165 (306)
T 3ii7_A           91 PRD---SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSG  165 (306)
T ss_dssp             CCB---SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTC
T ss_pred             ccc---ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcc
Confidence            211   1222222  566766664 3      4688999887653332  22222222333444456666653       


Q ss_pred             --CCcEEEEEcCCCceeEEeeeccc-ceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCc--eeEEeecccCceE
Q psy7482         205 --ESAITAYNLTDGSHLWQIKASAS-RIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGS--HLWHIKASASRIK  274 (327)
Q Consensus       205 --d~~i~i~d~~~~~~~~~~~~~~~-~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~--~~~~~~~~~~~v~  274 (327)
                        -..+.+||+.+.+-...-..... .-.+++.   -+++.++.|+.+     ..+.+||+.+.+  .+..+........
T Consensus       166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~---~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~  242 (306)
T 3ii7_A          166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVF---VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVK  242 (306)
T ss_dssp             EECCCEEEEETTTTEEEEECCCSSCCBSCEEEE---ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCE
T ss_pred             cccceEEEeCCCCCeEEECCCccchhhcceEEE---ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCcccee
Confidence              35588999887643221111111 1112232   367777777654     358899988765  2211211111222


Q ss_pred             EEeeeCcEEEEEecC-----CcEEEEEccCc
Q psy7482         275 GLASHRNHLICITSA-----GDLVVWELNED  300 (327)
Q Consensus       275 ~~~~~~~~l~~~~~d-----g~v~iw~~~~~  300 (327)
                      .+.+...+++.|+.+     ..+.+||+...
T Consensus       243 ~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          243 CAAVGSIVYVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             EEEETTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred             EEEECCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence            333334777778754     45888888887

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=98.09  E-value=0.00019  Score=57.68  Aligned_cols=194  Identities=10%  Similarity=0.026  Sum_probs=107.4

Q ss_pred             CCEEEEecCCCeEEEEEccccccccccccc-cccEEEEEEC--C-CCCeEEEe-cCCCcEEEEEcCCCeEEEeEEecccC
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQSGALMQH-EGTITCLKFT--P-EGSHLISC-SDDGSIAIFRVGSWQLEKLFKKAHKG   98 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~   98 (327)
                      +.+++.++.||.|.-.|..+|+....+... ..++....-.  + ++..++.. ..||.|..++..+|.....+.....-
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv   89 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV   89 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence            457888899999999999999888777643 1222221100  1 23334443 68999999999888655544221110


Q ss_pred             CceeeEEEe-----------cCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcccc--ceEEEE---Ec--cCCcEE
Q psy7482          99 TAVNHISIH-----------PSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFE--NLDSVV---WS--PEGLLY  160 (327)
Q Consensus        99 ~~v~~~~~~-----------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~v~~~~---~~--~~~~~l  160 (327)
                      . ..-+...           ..+..+++++.+|.+...|+++|+.+..+..........  ...|..   +.  ..+..+
T Consensus        90 ~-~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v  168 (339)
T 2be1_A           90 S-TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI  168 (339)
T ss_dssp             T-TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred             e-ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence            0 1111111           135578899999999999999999988876553311000  000111   10  112334


Q ss_pred             Eee-cCCeEEEEEecCCceeeEecC----CCcee-----EEEeecCceEEEeCCCCcEEEEEcCCCceeE
Q psy7482         161 AIP-IQNKAVVFSVEKAGVLQTLKS----ESKVH-----SVCFLNETTVCTGNEESAITAYNLTDGSHLW  220 (327)
Q Consensus       161 ~~~-~~~~i~i~d~~~~~~~~~~~~----~~~i~-----~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  220 (327)
                      ..+ .+..+.+.+ ++++ +..+..    ...+.     .-..+.|+.++.++.||.|..+|..+++.+.
T Consensus       169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W  236 (339)
T 2be1_A          169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW  236 (339)
T ss_dssp             EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred             EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence            444 366666666 4443 222210    00000     0001123445668889999999998888776

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=98.09  E-value=0.0056  Score=55.55  Aligned_cols=265  Identities=14%  Similarity=0.120  Sum_probs=151.9

Q ss_pred             CccEEEEEe-CCCEEEEecCCCeEEEEEcccccccccc-ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        14 ~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      ...|.+|.- ...++..|..+| +..||-.+.+..... ......|.++....++ .|..|+.+| +..||..+.+....
T Consensus        21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~   97 (758)
T 3ott_A           21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQP   97 (758)
T ss_dssp             CCCEEEEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCC
T ss_pred             cceEEEEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECc
Confidence            467999988 455677777777 566774322211111 1123568888777665 566666665 78999887654321


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEE
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVF  171 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~  171 (327)
                      . ...... |.++.. .++ .|..++.+ .|..+|..+++....... ........|.++...+++.+.+.. .+.+..+
T Consensus        98 ~-~~~~~~-i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWigt-~~Gl~~~  170 (758)
T 3ott_A           98 E-TDFPTD-VRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTR-RNGLPNNTIYSIIRTKDNQIYVGT-YNGLCRY  170 (758)
T ss_dssp             S-CCCCSC-EEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHH-HHCCSCSCEEEEEECTTCCEEEEE-TTEEEEE
T ss_pred             c-cCCCce-EEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccC-CCCcCCCeEEEEEEcCCCCEEEEe-CCCHhhC
Confidence            1 111223 776654 344 56666665 588899876554322111 111112348888888888877654 4568888


Q ss_pred             EecCCceeeEecC-------CCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEE
Q psy7482         172 SVEKAGVLQTLKS-------ESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       172 d~~~~~~~~~~~~-------~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l  243 (327)
                      +..+++.. .+..       ...|.++...++ +.|..|+. +-+..+|..+++...........|.++..  ..+|.+.
T Consensus       171 ~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~--d~~g~lW  246 (758)
T 3ott_A          171 IPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLAL--DGNGDLL  246 (758)
T ss_dssp             ETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEE--CTTCCEE
T ss_pred             ccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEE--cCCCCEE
Confidence            87765532 2221       224788887775 56677764 46888898766432221122345777766  3555554


Q ss_pred             EEecCCCeEEEEEcCCCceeEEee-------cccCceEEEeeeC-cEEEEEecCCcEEEE
Q psy7482         244 CTGNEESAITAYNLTDGSHLWHIK-------ASASRIKGLASHR-NHLICITSAGDLVVW  295 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~-~~l~~~~~dg~v~iw  295 (327)
                      + |+. +-+.+++..+++......       -....|.++.... ..|..|+..| +.+.
T Consensus       247 i-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~  303 (758)
T 3ott_A          247 A-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLS  303 (758)
T ss_dssp             E-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEE
T ss_pred             E-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-cccc
Confidence            4 444 457888876654322111       1124588887776 5666677666 4443

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.04  E-value=0.0033  Score=51.23  Aligned_cols=225  Identities=13%  Similarity=0.150  Sum_probs=115.5

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEcccccc--cccc---ccccccEEEEEECCC---CCeEEEecC-C-----CcE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ--SGAL---MQHEGTITCLKFTPE---GSHLISCSD-D-----GSI   78 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~--~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~i   78 (327)
                      ..-..|+|  +|+++++ ..+|.|++++  +++.  +..+   .........++|+|+   +..|+.+.. .     ..|
T Consensus        31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v  107 (352)
T 2ism_A           31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV  107 (352)
T ss_dssp             SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred             CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence            34568888  7775554 5569999998  3331  1111   122456889999998   555554433 2     568


Q ss_pred             EEEEcCCCeE---EEe---EEe--cccCCceeeEEEecCCCEEEEEeCC-------------CCEEEEEcCCCceeeeee
Q psy7482          79 AIFRVGSWQL---EKL---FKK--AHKGTAVNHISIHPSGKLALSVGKD-------------KTLRTWNLVKGRSAYITN  137 (327)
Q Consensus        79 ~iw~~~~~~~---~~~---~~~--~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~~~~~~  137 (327)
                      ..++...+..   ...   +..  ..... ...++|.|+|.+.++.+..             |.|.-++... +....-+
T Consensus       108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~-~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG-~~p~~np  185 (352)
T 2ism_A          108 VRLRHLGERGVLDRVVLDGIPARPHGLHS-GGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG-EPAPGNP  185 (352)
T ss_dssp             EEEEECSSCEEEEEEEEEEECCCTTCCCC-CCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS-SBCTTCT
T ss_pred             EEEEeCCCCcCceEEEEEeCCCCCCCCcC-CceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC-CCCCCCc
Confidence            8888764321   111   210  11112 5689999999766654321             4455555432 1100000


Q ss_pred             c--------cccCccccceEEEEEcc-CCcEEEeec-CCeE------EEEEecCCc------------------eeeEec
Q psy7482         138 L--------SSYGVGFENLDSVVWSP-EGLLYAIPI-QNKA------VVFSVEKAG------------------VLQTLK  183 (327)
Q Consensus       138 ~--------~~~~~~~~~v~~~~~~~-~~~~l~~~~-~~~i------~i~d~~~~~------------------~~~~~~  183 (327)
                      +        ............++|+| ++.++++-. .+.+      .+.-+..+.                  +...+.
T Consensus       186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~  265 (352)
T 2ism_A          186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP  265 (352)
T ss_dssp             TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred             ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence            0        00000012267889999 666666543 2221      122222222                  222233


Q ss_pred             CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCce------eEEeeecccceEEEEEEecCCCcEEEEe
Q psy7482         184 SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSH------LWQIKASASRIKGLVFFSIPQETTVCTG  246 (327)
Q Consensus       184 ~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~------~~~~~~~~~~v~~~~~~~s~~~~~l~~~  246 (327)
                      .......++|.....+++....+.|...++.....      ...+-.....+..+++  .|+|.++++.
T Consensus       266 ~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~--~pdG~lyv~~  332 (352)
T 2ism_A          266 QGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQV--GPDGALYVTT  332 (352)
T ss_dssp             TCCCEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEE--CTTSCEEEEE
T ss_pred             CCCCCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEE--CCCCcEEEEE
Confidence            33456677774445555556667787777654321      1222122346778887  4788666554

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=98.03  E-value=0.0023  Score=51.28  Aligned_cols=224  Identities=13%  Similarity=0.049  Sum_probs=113.8

Q ss_pred             EEEEecCCCeEEEEEcccccccc-ccccccccEEEEEECCCCCeEEEecC-----C------CcEEEEEcCCCeEEEeEE
Q psy7482          26 LAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSD-----D------GSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------~~i~iw~~~~~~~~~~~~   93 (327)
                      +++.|+  ..+..||..+++-.. .+..............++..++.|+.     .      ..+..||..+.+-...- 
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~-   83 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP-   83 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC-
T ss_pred             EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC-
Confidence            455566  579999998876432 11111112222233346777777773     1      12778888876643321 


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeCC--------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGKD--------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ  165 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  165 (327)
                      ...... .......-+++.++.|+.+        ..+.+||+.+.+.......+....   .. +++. .++++++.|+.
T Consensus        84 ~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~---~~-~~~~-~~~~iyv~GG~  157 (315)
T 4asc_A           84 PLPSPR-CLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVY---GH-TVLS-HMDLVYVIGGK  157 (315)
T ss_dssp             CBSSCE-ESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCB---SC-EEEE-ETTEEEEECCB
T ss_pred             CCCcch-hceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccc---ce-eEEE-ECCEEEEEeCC
Confidence            111111 1111112256666777632        458999998876544433332211   11 2222 35666666642


Q ss_pred             -------CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCCC-----cEEEEEcCCCceeEEeeecc-cceE
Q psy7482         166 -------NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEES-----AITAYNLTDGSHLWQIKASA-SRIK  230 (327)
Q Consensus       166 -------~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~-~~v~  230 (327)
                             ..+.+||..+.+-...  +.....-.+++...+..++.|+.++     .+.+||+.+.+-...-.... ..-.
T Consensus       158 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~  237 (315)
T 4asc_A          158 GSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSL  237 (315)
T ss_dssp             CTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSC
T ss_pred             CCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccce
Confidence                   4688999887643222  2222222334444456677776544     47889987764322111111 1111


Q ss_pred             EEEEEecCCCcEEEEecCC--------------CeEEEEEcCCCc
Q psy7482         231 GLVFFSIPQETTVCTGNEE--------------SAITAYNLTDGS  261 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d--------------~~i~i~d~~~~~  261 (327)
                      +++.   -+++.++.|+.+              ..+.+||+.+.+
T Consensus       238 ~~~~---~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  279 (315)
T 4asc_A          238 SLVS---LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK  279 (315)
T ss_dssp             EEEE---ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred             eEEE---ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence            2232   366777777653              236777876654

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.89  E-value=0.0057  Score=48.73  Aligned_cols=233  Identities=12%  Similarity=0.087  Sum_probs=121.2

Q ss_pred             CCCeEEEecCC----CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC----C-----CCEEEEEcCCCc
Q psy7482          65 EGSHLISCSDD----GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK----D-----KTLRTWNLVKGR  131 (327)
Q Consensus        65 ~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----g~i~iwd~~~~~  131 (327)
                      ++..++.|+.+    ..+.+||..+.+....- .......-.+++ ..++.+++.|+.    +     ..+.+||+.+.+
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~  101 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLA-DLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ  101 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEEEECC-CCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeEeECC-CCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence            45666667632    46889998876644321 111111011222 235666777665    2     468899998876


Q ss_pred             eeeeeeccccCccccceEEEEEccCCcEEEeec-C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeC
Q psy7482         132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGN  203 (327)
Q Consensus       132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~  203 (327)
                      .......+...   .....+.+  ++++++.|+ +     ..+.+||..+.+-...  +.....-.+++...+..++.|+
T Consensus       102 W~~~~~~p~~r---~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG  176 (308)
T 1zgk_A          102 WSPCAPMSVPR---NRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGG  176 (308)
T ss_dssp             EEECCCCSSCC---BTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred             EeECCCCCcCc---cccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeC
Confidence            54443333221   11222222  567777664 2     4688899877653322  2222222233344446666766


Q ss_pred             CC-----CcEEEEEcCCCceeEE--eeecccceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCcee--EEeecc
Q psy7482         204 EE-----SAITAYNLTDGSHLWQ--IKASASRIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGSHL--WHIKAS  269 (327)
Q Consensus       204 ~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~--~~~~~~  269 (327)
                      .+     ..+.+||+.+.+-...  +..... -.+++.   -+++.++.|+.+     ..+.+||+.+.+-.  ..+...
T Consensus       177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~  252 (308)
T 1zgk_A          177 FDGTNRLNSAECYYPERNEWRMITAMNTIRS-GAGVCV---LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR  252 (308)
T ss_dssp             BCSSCBCCCEEEEETTTTEEEECCCCSSCCB-SCEEEE---ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred             CCCCCcCceEEEEeCCCCeEeeCCCCCCccc-cceEEE---ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence            44     4588999876543211  111111 112233   367777777764     46899998876522  111111


Q ss_pred             cCceEEEeeeCcEEEEEecCC-----cEEEEEccCccCCCceeeeec
Q psy7482         270 ASRIKGLASHRNHLICITSAG-----DLVVWELNEDVTREPQRVSAT  311 (327)
Q Consensus       270 ~~~v~~~~~~~~~l~~~~~dg-----~v~iw~~~~~~~~~~~~~~~~  311 (327)
                      ......+.....+++.|+.++     .+.+||+.+.   .+..+...
T Consensus       253 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~  296 (308)
T 1zgk_A          253 RSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD---TWSEVTRM  296 (308)
T ss_dssp             CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT---EEEEEEEC
T ss_pred             ccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCC---EEeecCCC
Confidence            111122223337777777543     4778888877   45555433

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.78  E-value=0.011  Score=48.69  Aligned_cols=213  Identities=11%  Similarity=0.107  Sum_probs=139.8

Q ss_pred             CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482          74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW  153 (327)
Q Consensus        74 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  153 (327)
                      .+..|.|-|+.+++.....  .-.   .-+.-.+|..+.++.-. ...+.++|+++.+.+....+...      |.-=.|
T Consensus        46 ~~~~vvIiDl~~~~~~~rr--pi~---AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~------VvfWkW  113 (494)
T 1bpo_A           46 EQAQVVIIDMNDPSNPIRR--PIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD------VTFWKW  113 (494)
T ss_dssp             TCCEEEEEETTSTTSCEEE--ECC---CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC------CCEEEE
T ss_pred             CCCeEEEEECCCCCcceec--ccc---cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC------ceEEEe
Confidence            3458999999886654332  111   23456788888777665 68999999999988887777665      666666


Q ss_pred             ccCCcEEEeecCCeEEEEEecC-CceeeEec-----CCCceeEEEeecC-ceEEEeC-------CCCcEEEEEcCCCcee
Q psy7482         154 SPEGLLYAIPIQNKAVVFSVEK-AGVLQTLK-----SESKVHSVCFLNE-TTVCTGN-------EESAITAYNLTDGSHL  219 (327)
Q Consensus       154 ~~~~~~l~~~~~~~i~i~d~~~-~~~~~~~~-----~~~~i~~~~~~~~-~~l~~~~-------~d~~i~i~d~~~~~~~  219 (327)
                      -. .+.|+..++..|+-|++.. ..+.+.+.     ....|.....+++ +.++..+       ..|.+.+|..+.+ .-
T Consensus       114 is-~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~s  191 (494)
T 1bpo_A          114 IS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VS  191 (494)
T ss_dssp             EE-TTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CE
T ss_pred             cC-CCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-cc
Confidence            54 3467777789999999974 34555555     2456777777777 5544322       3477889998654 45


Q ss_pred             EEeeecccceEEEEEEecCC-CcEEEEecC---CCeEEEEEcCCC---ce-----eEEee----cccCceEEEeeeC--c
Q psy7482         220 WQIKASASRIKGLVFFSIPQ-ETTVCTGNE---ESAITAYNLTDG---SH-----LWHIK----ASASRIKGLASHR--N  281 (327)
Q Consensus       220 ~~~~~~~~~v~~~~~~~s~~-~~~l~~~~~---d~~i~i~d~~~~---~~-----~~~~~----~~~~~v~~~~~~~--~  281 (327)
                      +.+++|......+.....+. ...++.+..   .+.++|.++...   .+     ...+.    ...+-..++..++  .
T Consensus       192 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg  271 (494)
T 1bpo_A          192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD  271 (494)
T ss_dssp             EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT
T ss_pred             chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC
Confidence            66788877665555410011 123333333   378999998543   11     11111    1234456777888  8


Q ss_pred             EEEEEecCCcEEEEEccCc
Q psy7482         282 HLICITSAGDLVVWELNED  300 (327)
Q Consensus       282 ~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+...+.-|.|.+||+.++
T Consensus       272 viyviTK~G~i~lyDleTg  290 (494)
T 1bpo_A          272 VVFLITKYGYIHLYDLETG  290 (494)
T ss_dssp             EEEEEETTSEEEEEETTTC
T ss_pred             EEEEEecCceEEEEecccc
Confidence            8999999999999999998

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.77  E-value=7.6e-05  Score=59.93  Aligned_cols=193  Identities=11%  Similarity=0.074  Sum_probs=105.8

Q ss_pred             CeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEe--cCCCEEEEE--eCCCCEEEEEcCCCceeeeeeccccC
Q psy7482          67 SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH--PSGKLALSV--GKDKTLRTWNLVKGRSAYITNLSSYG  142 (327)
Q Consensus        67 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~  142 (327)
                      ..++.++.||.|.-.|.++|+....+....... +....-.  +.+..++.+  ..||.|..++..+|........+...
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p-~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv   89 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQP-LIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV   89 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCC-SEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCC-cEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence            468889999999999999999999883331122 2221100  112234444  57999999999888665554443321


Q ss_pred             ccccceEE---EEE------ccCCcEEEeecCCeEEEEEecCCceeeEecCCCce--------eEEEe------ecCceE
Q psy7482         143 VGFENLDS---VVW------SPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKV--------HSVCF------LNETTV  199 (327)
Q Consensus       143 ~~~~~v~~---~~~------~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i--------~~~~~------~~~~~l  199 (327)
                       ...++..   ...      +.++..++.+.++.+...|+++|+.+..+....+.        .|...      ..++.+
T Consensus        90 -~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v  168 (339)
T 2be1_A           90 -STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI  168 (339)
T ss_dssp             -TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred             -eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence             0111111   000      13344444445999999999999999999843221        11111      112466


Q ss_pred             EEeCCCCcEEEEEcCCCceeEEeeecc--cceEE--E--EEEecCCCcEEEEecCCCeEEEEEcCCCceeE
Q psy7482         200 CTGNEESAITAYNLTDGSHLWQIKASA--SRIKG--L--VFFSIPQETTVCTGNEESAITAYNLTDGSHLW  264 (327)
Q Consensus       200 ~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~v~~--~--~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~  264 (327)
                      +.+..+..+.+.+ ++++ +..++...  .....  +  .+..+.++.+ +.++.||.|..+|..+|+.++
T Consensus       169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W  236 (339)
T 2be1_A          169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW  236 (339)
T ss_dssp             EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred             EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence            6776666666666 4453 33221100  00000  0  0000123555 446778888888888888776

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.76  E-value=0.0099  Score=47.59  Aligned_cols=224  Identities=14%  Similarity=0.139  Sum_probs=113.3

Q ss_pred             CEEEEecCCCeEEEEEccccccccc-cccccccEEEEEECCCCCeEEEecC----CC-------cEEEEEcCCCeEEEeE
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPEGSHLISCSD----DG-------SIAIFRVGSWQLEKLF   92 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~----d~-------~i~iw~~~~~~~~~~~   92 (327)
                      .+++.|+.  .+..||..+++.... +..............++..++.|+.    ++       .+..||..+.+....-
T Consensus        17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~   94 (318)
T 2woz_A           17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP   94 (318)
T ss_dssp             EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred             hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence            44555553  488999887764331 1111111122223446777777773    11       1778888776544321


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCC-------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKD-------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-  164 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  164 (327)
                       .......-.+++. -+++.++.|+.+       ..+.+||+.+.+.......+....   .- +++. .++++++.|+ 
T Consensus        95 -~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~-~~~~-~~~~iyv~GG~  167 (318)
T 2woz_A           95 -PLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY---GH-NVIS-HNGMIYCLGGK  167 (318)
T ss_dssp             -CBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE---SC-EEEE-ETTEEEEECCE
T ss_pred             -CCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc---cc-EEEE-ECCEEEEEcCC
Confidence             1111110112222 256777777754       247888988776654433332211   11 2222 4667766664 


Q ss_pred             -C-----CeEEEEEecCCceeeE--ecCCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeE--Eeeecccce
Q psy7482         165 -Q-----NKAVVFSVEKAGVLQT--LKSESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLW--QIKASASRI  229 (327)
Q Consensus       165 -~-----~~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~--~~~~~~~~v  229 (327)
                       +     ..+.+||..+.+-...  +.....-.+++...+..++.|+.+     ..+.+||+.+.+-..  .+..... -
T Consensus       168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-~  246 (318)
T 2woz_A          168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS-S  246 (318)
T ss_dssp             ESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB-S
T ss_pred             CCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc-c
Confidence             1     3588999887653322  222222233444445666666543     346788887654221  1111111 1


Q ss_pred             EEEEEEecCCCcEEEEecCC--------------CeEEEEEcCCCc
Q psy7482         230 KGLVFFSIPQETTVCTGNEE--------------SAITAYNLTDGS  261 (327)
Q Consensus       230 ~~~~~~~s~~~~~l~~~~~d--------------~~i~i~d~~~~~  261 (327)
                      .+++.   .+++.++.|+.+              ..+.+||+.+.+
T Consensus       247 ~~~~~---~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  289 (318)
T 2woz_A          247 ISLVS---LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE  289 (318)
T ss_dssp             CEEEE---ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred             eEEEE---ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence            12232   466777777653              347777877654

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.76  E-value=0.011  Score=48.14  Aligned_cols=239  Identities=11%  Similarity=0.139  Sum_probs=125.0

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE------ecccCCceeeEEEecC---CCEEEEEeC--------
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK------KAHKGTAVNHISIHPS---GKLALSVGK--------  118 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------~~~~~~~v~~~~~~~~---~~~l~~~~~--------  118 (327)
                      ....|+|.|+|+.|+++...|.|++++.. +.....+.      ...... ...++++|+   +..|+.+..        
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g-~~gia~~pdf~~~g~lYv~~~~~~~~g~~   96 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGG-LLDVVLAPDFAQSRRIWLSYSEVGDDGKA   96 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCS-EEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCC-ceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence            46789999999834455567899999853 33221110      111233 789999996   445554432        


Q ss_pred             CCCEEEEEcCCC--ce--ee-ee-eccccCccccceEEEEEccCCcEEEeecC--------------CeEEEEEecCCc-
Q psy7482         119 DKTLRTWNLVKG--RS--AY-IT-NLSSYGVGFENLDSVVWSPEGLLYAIPIQ--------------NKAVVFSVEKAG-  177 (327)
Q Consensus       119 dg~i~iwd~~~~--~~--~~-~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------~~i~i~d~~~~~-  177 (327)
                      ...|..+++...  +.  .. .+ ..+...........+.|.|+|.++++..+              |.|.-++....- 
T Consensus        97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p  176 (353)
T 2g8s_A           97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP  176 (353)
T ss_dssp             EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred             eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence            235666666433  11  11 11 11110011112467999999977666432              467666654320 


Q ss_pred             -----------eeeEec-CCCceeEEEeec-CceEEEeCCCC--cEEEEEcCCCc-------------------------
Q psy7482         178 -----------VLQTLK-SESKVHSVCFLN-ETTVCTGNEES--AITAYNLTDGS-------------------------  217 (327)
Q Consensus       178 -----------~~~~~~-~~~~i~~~~~~~-~~~l~~~~~d~--~i~i~d~~~~~-------------------------  217 (327)
                                 ....+. .......++|+| ++.|.++....  .=.|.-+..+.                         
T Consensus       177 ~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~  256 (353)
T 2g8s_A          177 DDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI  256 (353)
T ss_dssp             TTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred             CCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence                       112222 234577899999 57666654321  11222111111                         


Q ss_pred             ------eeEEeeecccceEEEEEEec-----CCCcEEEEecCCCeEEEEEcCCCceeEE--e-ecccCceEEEeeeC-cE
Q psy7482         218 ------HLWQIKASASRIKGLVFFSI-----PQETTVCTGNEESAITAYNLTDGSHLWH--I-KASASRIKGLASHR-NH  282 (327)
Q Consensus       218 ------~~~~~~~~~~~v~~~~~~~s-----~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~-~~~~~~v~~~~~~~-~~  282 (327)
                            ++..+..| .....+.|...     .++.++++.-..+.|...++..++....  + ......+..+++.| ..
T Consensus       257 ~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~  335 (353)
T 2g8s_A          257 VAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY  335 (353)
T ss_dssp             CTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred             CCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence                  11222222 34667777521     1477777777788888888876643322  2 12234678888888 33


Q ss_pred             EEEEecCCcEEEEEc
Q psy7482         283 LICITSAGDLVVWEL  297 (327)
Q Consensus       283 l~~~~~dg~v~iw~~  297 (327)
                      |..++.++.=+||.+
T Consensus       336 lyv~td~~~g~I~ri  350 (353)
T 2g8s_A          336 LYVLTDESSGELLKV  350 (353)
T ss_dssp             EEEEECSTTEEEEEE
T ss_pred             EEEEEeCCCCEEEEE
Confidence            333332222244444

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.74  E-value=0.01  Score=47.37  Aligned_cols=220  Identities=8%  Similarity=0.005  Sum_probs=114.2

Q ss_pred             eEEEecCCCcEEEEEcCCCeEEEeEEec-ccCCceeeEEEecCCCEEEEEeC----C-------CCEEEEEcCCCceeee
Q psy7482          68 HLISCSDDGSIAIFRVGSWQLEKLFKKA-HKGTAVNHISIHPSGKLALSVGK----D-------KTLRTWNLVKGRSAYI  135 (327)
Q Consensus        68 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~----d-------g~i~iwd~~~~~~~~~  135 (327)
                      +++.|+  ..+..||..+++-.. .... .... ........++..++.|+.    +       ..+..||..+.+....
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~   82 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPK-NHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM   82 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEE-EECCCCSCS-SEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred             EEEEcC--CceEEECCCCCeEec-CCCCCCCCc-cceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence            344555  469999998877543 2111 1112 233333457778888874    1       1277889888765443


Q ss_pred             eeccccCccccceEEEEEccCCcEEEeec-C--------CeEEEEEecCCceee--EecCCCceeEEEeecCceEEEeCC
Q psy7482         136 TNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q--------NKAVVFSVEKAGVLQ--TLKSESKVHSVCFLNETTVCTGNE  204 (327)
Q Consensus       136 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~--------~~i~i~d~~~~~~~~--~~~~~~~i~~~~~~~~~~l~~~~~  204 (327)
                      ...+...   .....+.+  ++++++.|+ +        ..+.+||..+.+-..  .+.....-.+++...+..++.|+.
T Consensus        83 ~~~p~~r---~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~  157 (315)
T 4asc_A           83 PPLPSPR---CLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGK  157 (315)
T ss_dssp             CCBSSCE---ESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCB
T ss_pred             CCCCcch---hceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCC
Confidence            3333221   11122222  566666654 2        458899988765322  222222223344444566677765


Q ss_pred             ------CCcEEEEEcCCCceeE--EeeecccceEEEEEEecCCCcEEEEecCCC-----eEEEEEcCCCceeE--Eeecc
Q psy7482         205 ------ESAITAYNLTDGSHLW--QIKASASRIKGLVFFSIPQETTVCTGNEES-----AITAYNLTDGSHLW--HIKAS  269 (327)
Q Consensus       205 ------d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~-----~i~i~d~~~~~~~~--~~~~~  269 (327)
                            -..+.+||..+.+-..  .+.... .-.+++.   -+++.++.|+.++     .+.+||+.+.+-..  .+...
T Consensus       158 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~  233 (315)
T 4asc_A          158 GSDRKCLNKMCVYDPKKFEWKELAPMQTAR-SLFGATV---HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQE  233 (315)
T ss_dssp             CTTSCBCCCEEEEETTTTEEEECCCCSSCC-BSCEEEE---ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSC
T ss_pred             CCCCcccceEEEEeCCCCeEEECCCCCCch-hceEEEE---ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCc
Confidence                  2468899987754221  111111 1112222   3667777776554     58889987765221  11111


Q ss_pred             cCceEEEeeeCcEEEEEecCC--------------cEEEEEccCc
Q psy7482         270 ASRIKGLASHRNHLICITSAG--------------DLVVWELNED  300 (327)
Q Consensus       270 ~~~v~~~~~~~~~l~~~~~dg--------------~v~iw~~~~~  300 (327)
                      ......+.+...+++.|+.++              .+.+||+.+.
T Consensus       234 r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~  278 (315)
T 4asc_A          234 RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK  278 (315)
T ss_dssp             CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred             ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence            111122333337777777642              3677888776

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.70  E-value=0.003  Score=46.87  Aligned_cols=107  Identities=12%  Similarity=0.133  Sum_probs=65.6

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc--CccccceEEEEEccCCcEEEeecCCeEEEEEecCCce
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY--GVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV  178 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~  178 (327)
                      +..++|+|++.+.++  .+|.+.-.+..+.....-+.....  ...-....++.|.|+|.+.++ +||.|+-++..+...
T Consensus        43 ~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~  119 (236)
T 1tl2_A           43 FKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDT  119 (236)
T ss_dssp             CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTT
T ss_pred             ceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCC
Confidence            889999998885555  678766666544222111111000  001112578999999999998 789988777543221


Q ss_pred             ee------Eec--CCCceeEEEeecCceEEEeCCCCcEEEE
Q psy7482         179 LQ------TLK--SESKVHSVCFLNETTVCTGNEESAITAY  211 (327)
Q Consensus       179 ~~------~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~  211 (327)
                      ..      .+.  .=..+..+.+.|++.|.+.. |+.++-.
T Consensus       120 ~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~  159 (236)
T 1tl2_A          120 DNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKA  159 (236)
T ss_dssp             CCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred             CceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEec
Confidence            11      111  11467899999998777777 8875443

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.62  E-value=0.018  Score=46.56  Aligned_cols=220  Identities=12%  Similarity=0.162  Sum_probs=118.5

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE-----ecccCCceeeEEEecC---CCEEEEE---eCCCCE
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK-----KAHKGTAVNHISIHPS---GKLALSV---GKDKTL  122 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~---~~~l~~~---~~dg~i  122 (327)
                      -.....|+|.|+|+++++--..|.|++++...++......     ...... ...++++|+   +..|+..   ..++.|
T Consensus        31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~G-llGia~~Pdf~~~g~lYv~yt~~~~~~v  109 (347)
T 3das_A           31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGG-LLGIALSPDYASDHMVYAYFTSASDNRI  109 (347)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBS-EEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred             CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCC-ceeeEeccccccCCEEEEEEecCCCCEE
Confidence            3456899999999877776658999999866555422110     112334 789999995   3445443   234566


Q ss_pred             EEEEcCCCc--------eeeee-eccccCccccceEEEEEccCCcEEEeec--------------CCeEEEEEecCC---
Q psy7482         123 RTWNLVKGR--------SAYIT-NLSSYGVGFENLDSVVWSPEGLLYAIPI--------------QNKAVVFSVEKA---  176 (327)
Q Consensus       123 ~iwd~~~~~--------~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------------~~~i~i~d~~~~---  176 (327)
                      .-|.+..+.        ....+ .++....|  ....+.|.|+|.++++..              .|.|.-++....   
T Consensus       110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H--~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~  187 (347)
T 3das_A          110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIH--NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAP  187 (347)
T ss_dssp             EEEEBCTTSCTTCCBCCCEEEEEEECCCSSC--CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCT
T ss_pred             EEEEeCCCCcccccCCCcEEEEEcCCCCCCc--cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccC
Confidence            666655421        11111 12222222  256799999998777643              245555554322   


Q ss_pred             ------ceeeEecCCCceeEEEeecCceEEEeCC--CCcEEEEEcCCCc------------------eeEEeeecccceE
Q psy7482         177 ------GVLQTLKSESKVHSVCFLNETTVCTGNE--ESAITAYNLTDGS------------------HLWQIKASASRIK  230 (327)
Q Consensus       177 ------~~~~~~~~~~~i~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~------------------~~~~~~~~~~~v~  230 (327)
                            ..+... .......++|+|++.|.++..  ++.-.+.-+..+.                  ++..+..+.....
T Consensus       188 ~nPf~~~~i~a~-G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~  266 (347)
T 3das_A          188 GNPFPGSPVYSY-GHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS  266 (347)
T ss_dssp             TCSSTTCCEEEB-CCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred             CCCCCCCeEEee-CCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence                  111122 223466788988865555432  2222232222221                  1222222223566


Q ss_pred             EEEEEecCCCcEEEEecCCCeEEEEEcCCCce----eEEeecccCceEEEeeeC
Q psy7482         231 GLVFFSIPQETTVCTGNEESAITAYNLTDGSH----LWHIKASASRIKGLASHR  280 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~  280 (327)
                      .++|.   ++..+...-..+.|....+.....    ...+.+....+.+++..|
T Consensus       267 G~~~~---~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~p  317 (347)
T 3das_A          267 GIAYA---EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAG  317 (347)
T ss_dssp             EEEEE---TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEE
T ss_pred             ceEEE---cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECC
Confidence            77873   567676666666776667655432    222333345677777666

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.62  E-value=0.017  Score=47.56  Aligned_cols=147  Identities=12%  Similarity=0.171  Sum_probs=92.3

Q ss_pred             eCCCEEEEecCCCeEEEEEccccccccccccc----cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe----------
Q psy7482          22 ATSKLAASSGADETVVLYDMVKRKQSGALMQH----EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ----------   87 (327)
Q Consensus        22 ~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~----------   87 (327)
                      -++..++.+- ++.||.-++.....-+.+...    -..|..+..+|+|++||..+.. .|.|-.+..+.          
T Consensus        30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~  107 (452)
T 3pbp_A           30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQD  107 (452)
T ss_dssp             TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHH
T ss_pred             cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccccc
Confidence            3666666654 578888887754433333322    2257889999999999988755 78888876321          


Q ss_pred             --EEEeEEecc----cCCceeeEEEec---CCCEEEEEeCCCCEEEEEcCCCceeeeeecccc------CccccceEEEE
Q psy7482          88 --LEKLFKKAH----KGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY------GVGFENLDSVV  152 (327)
Q Consensus        88 --~~~~~~~~~----~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~~v~~~~  152 (327)
                        ..+.+..+.    ...+|..+.|+|   .+..|++-..|+.|++||+........ .+...      ......+.+++
T Consensus       108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~  186 (452)
T 3pbp_A          108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE  186 (452)
T ss_dssp             TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred             ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence              112332221    123499999999   456899999999999999986332111 11111      11124588999


Q ss_pred             EccCCcEEEe--ec-CCeEEEE
Q psy7482         153 WSPEGLLYAI--PI-QNKAVVF  171 (327)
Q Consensus       153 ~~~~~~~l~~--~~-~~~i~i~  171 (327)
                      |.+++-.|.+  .+ +|.|+-.
T Consensus       187 Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          187 FSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             ECTTSSCEEEEECTTSCEEEEE
T ss_pred             EcCCCcEEEEEecCCCCCEEEE
Confidence            9997754433  33 5666543

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=97.61  E-value=0.031  Score=50.03  Aligned_cols=196  Identities=9%  Similarity=0.071  Sum_probs=106.7

Q ss_pred             eCCCEEEEecCC----CeEEEEEcccccccccc--------ccccccEEEEEECCCCCeEEEecCC------CcEEEEEc
Q psy7482          22 ATSKLAASSGAD----ETVVLYDMVKRKQSGAL--------MQHEGTITCLKFTPEGSHLISCSDD------GSIAIFRV   83 (327)
Q Consensus        22 ~~~~~l~~~~~d----g~v~~w~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iw~~   83 (327)
                      .++.+++.||.+    ..+.+||..+++....-        ......-.++.+..+++.++.|+.+      ..+.+||.
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence            577888888754    46888998776433211        1111112233332267777787754      35888999


Q ss_pred             CCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC--CEEEEEcCCCceeeeeeccccCccccceEEEEEccC-CcEE
Q psy7482          84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE-GLLY  160 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l  160 (327)
                      .+.+....- .......-.+++...+++.++.|+.++  .+.+||..+.+..................++.+..+ ++++
T Consensus       476 ~t~~W~~~~-~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy  554 (695)
T 2zwa_A          476 KTREWSMIK-SLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI  554 (695)
T ss_dssp             TTTEEEECC-CCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred             CCCcEEECC-CCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence            875543321 111111012233324788888887654  699999988765443321111111111233555555 6676


Q ss_pred             Eeec---C-----CeEEEEEecCCce-----eeEec----CCCceeEEEeec-CceEEEeCC--------CCcEEEEEcC
Q psy7482         161 AIPI---Q-----NKAVVFSVEKAGV-----LQTLK----SESKVHSVCFLN-ETTVCTGNE--------ESAITAYNLT  214 (327)
Q Consensus       161 ~~~~---~-----~~i~i~d~~~~~~-----~~~~~----~~~~i~~~~~~~-~~~l~~~~~--------d~~i~i~d~~  214 (327)
                      +.|+   +     +.+.+||+.+.+-     ...+.    ....-.+++... +..++.|+.        ...+.+||+.
T Consensus       555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~  634 (695)
T 2zwa_A          555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL  634 (695)
T ss_dssp             EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred             EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence            6664   2     4688999988761     12221    111122334445 566777763        3568999998


Q ss_pred             CCce
Q psy7482         215 DGSH  218 (327)
Q Consensus       215 ~~~~  218 (327)
                      +.+-
T Consensus       635 t~~W  638 (695)
T 2zwa_A          635 SETL  638 (695)
T ss_dssp             TTEE
T ss_pred             CCeE
Confidence            7653

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.60  E-value=0.02  Score=46.61  Aligned_cols=234  Identities=12%  Similarity=0.092  Sum_probs=116.0

Q ss_pred             EeCCCEEEEecCC-CeEEEEEccc--cc--cccccc-cccccEEEEEECCCCCeEEEecC-C---------CcEEEEEcC
Q psy7482          21 AATSKLAASSGAD-ETVVLYDMVK--RK--QSGALM-QHEGTITCLKFTPEGSHLISCSD-D---------GSIAIFRVG   84 (327)
Q Consensus        21 ~~~~~~l~~~~~d-g~v~~w~~~~--~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------~~i~iw~~~   84 (327)
                      ..++.+++.|+.+ ..+.++|+.+  .+  .+..+. .....-.++.+  ++++++.|+. +         ..+.+||..
T Consensus        17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~   94 (357)
T 2uvk_A           17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK   94 (357)
T ss_dssp             EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred             EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence            3377777777643 4688888863  22  222222 11111222222  4667777776 2         468899998


Q ss_pred             CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC---------------------------------------CCEEEE
Q psy7482          85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---------------------------------------KTLRTW  125 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~iw  125 (327)
                      +.+-...-....... ....+...++++++.|+.+                                       ..+.+|
T Consensus        95 ~~~W~~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y  173 (357)
T 2uvk_A           95 TNSWVKLMSHAPMGM-AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF  173 (357)
T ss_dssp             TTEEEECSCCCSSCC-SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred             CCcEEECCCCCCccc-ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence            766443321110111 1222222567777888754                                       478899


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-------CCeEEEEEe--cCCceee--EecCCC-c-eeEEE
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-------QNKAVVFSV--EKAGVLQ--TLKSES-K-VHSVC  192 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~~~i~i~d~--~~~~~~~--~~~~~~-~-i~~~~  192 (327)
                      |+.+.+.......+.....   -.+++.. ++++++.|+       ...+..||+  .+.+-..  .+.... . -.+++
T Consensus       174 d~~~~~W~~~~~~p~~~~~---~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~  249 (357)
T 2uvk_A          174 DPSTQQWSYAGESPWYGTA---GAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAG  249 (357)
T ss_dssp             ETTTTEEEEEEECSSCCCB---SCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEE
T ss_pred             eCCCCcEEECCCCCCCCcc---cccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEE
Confidence            9988776555443322110   0222222 566666654       235677776  3332211  111111 1 12244


Q ss_pred             eecCceEEEeCCC----------------------CcEEEEEcCCCce--eEEeeecccceEEEEEEecCCCcEEEEecC
Q psy7482         193 FLNETTVCTGNEE----------------------SAITAYNLTDGSH--LWQIKASASRIKGLVFFSIPQETTVCTGNE  248 (327)
Q Consensus       193 ~~~~~~l~~~~~d----------------------~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~  248 (327)
                      ...+.+++.|+.+                      ..+.+||+.+.+-  +..+......- .++.   .+++.++.|+.
T Consensus       250 ~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~---~~~~i~v~GG~  325 (357)
T 2uvk_A          250 ISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYG-VSLP---WNNSLLIIGGE  325 (357)
T ss_dssp             EETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSS-EEEE---ETTEEEEEEEE
T ss_pred             EECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccc-eeEE---eCCEEEEEeee
Confidence            4445667777632                      2577899876542  22222111111 2222   46777777775


Q ss_pred             CC------eEEEEEcCCCceeEE
Q psy7482         249 ES------AITAYNLTDGSHLWH  265 (327)
Q Consensus       249 d~------~i~i~d~~~~~~~~~  265 (327)
                      ++      .+.++++++++.+..
T Consensus       326 ~~~~~~~~~v~~l~~~~~~~~~~  348 (357)
T 2uvk_A          326 TAGGKAVTDSVLITVKDNKVTVQ  348 (357)
T ss_dssp             CGGGCEEEEEEEEEC-CCSCEEE
T ss_pred             CCCCCEeeeEEEEEEcCcEeEee
Confidence            42      466678877775543

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=97.52  E-value=0.028  Score=46.41  Aligned_cols=266  Identities=12%  Similarity=0.107  Sum_probs=161.1

Q ss_pred             CCCEEEE---ecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCC
Q psy7482          23 TSKLAAS---SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT   99 (327)
Q Consensus        23 ~~~~l~~---~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~   99 (327)
                      ..+++..   .+.+..|.|-|+.++.......-   .--+.-.+|..+.||.-. ..++.|+|+++.+.++.+ .-.. .
T Consensus        34 SDkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~-~~~e-~  107 (494)
T 1bpo_A           34 SDKFICIREKVGEQAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH-TMTD-D  107 (494)
T ss_dssp             ETTEEEEEECCTTCCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEE-ECSS-C
T ss_pred             cCceEEEEecCCCCCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcce-ecCC-C
Confidence            3445543   23345799999988655422211   112344688888777665 678999999999888877 3333 3


Q ss_pred             ceeeEEEecCCCEEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeec--------CCeEEE
Q psy7482         100 AVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--------QNKAVV  170 (327)
Q Consensus       100 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~i~i  170 (327)
                       |..=.|-.+. .|+..+ +..|+-|++... .+...+..+.. .....|..-..+++.++++..+        .|.+.+
T Consensus       108 -VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~-L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQL  183 (494)
T 1bpo_A          108 -VTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSS-LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL  183 (494)
T ss_dssp             -CCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGG-GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEE
T ss_pred             -ceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchh-cccceEEEEEECCCCCeEEEEeecccCCcccceEEE
Confidence             6666676544 555554 367999999753 33333333222 2234577888889998776432        367888


Q ss_pred             EEecCCceeeEecCCCceeEEEeecC----ceEEEeC---CCCcEEEEEcCCC---cee-----EE-e-e--ecccceEE
Q psy7482         171 FSVEKAGVLQTLKSESKVHSVCFLNE----TTVCTGN---EESAITAYNLTDG---SHL-----WQ-I-K--ASASRIKG  231 (327)
Q Consensus       171 ~d~~~~~~~~~~~~~~~i~~~~~~~~----~~l~~~~---~d~~i~i~d~~~~---~~~-----~~-~-~--~~~~~v~~  231 (327)
                      |..+.+.....-.|......+....+    ..++.+.   ..+.+++.++...   .+.     .. + .  ...+-..+
T Consensus       184 YS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPva  263 (494)
T 1bpo_A          184 YSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA  263 (494)
T ss_dssp             EESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEE
T ss_pred             eeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeE
Confidence            98775543222223333333333211    2233222   2378888888432   111     11 1 1  11222345


Q ss_pred             EEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         232 LVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       232 ~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +..  ++.-..+..-+.-|.|.+||+.++.++..-+-..++|..-+.+.  .=++.....|.|.--.++..
T Consensus       264 mqv--s~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~  332 (494)
T 1bpo_A          264 MQI--SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE  332 (494)
T ss_dssp             EEE--ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred             EEe--cccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence            555  37777888888899999999999999988887777776666554  56666668888777666665

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.50  E-value=0.026  Score=45.71  Aligned_cols=193  Identities=12%  Similarity=0.099  Sum_probs=109.5

Q ss_pred             cEEEEEECCCCCeEEEec------------CCCcEEEEEcCC--CeEEEeEE-ec-----ccCCceeeEEEec--CCC-E
Q psy7482          56 TITCLKFTPEGSHLISCS------------DDGSIAIFRVGS--WQLEKLFK-KA-----HKGTAVNHISIHP--SGK-L  112 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~------------~d~~i~iw~~~~--~~~~~~~~-~~-----~~~~~v~~~~~~~--~~~-~  112 (327)
                      ....+...|+|..+++++            .+|.|.++|.++  ++.. .+. .+     ..-. ...+.+.+  ++. +
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~-~l~~~g~~~~~~~f~-PhGi~~~~d~dg~~~  128 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVS-ELEIIGNTLDISSFN-PHGISTFIDDDNTVY  128 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEE-ECEEECSSCCGGGCC-EEEEEEEECTTCCEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceE-EEEccCCCCCcCcee-eeeeEEEECCCCcEE
Confidence            345666788775555542            689999999873  2322 221 22     1123 67778766  343 4


Q ss_pred             EEEEe-C--CCCEEEEEcCCC--ceeeeeeccccCccccceEEEEEccCCcEEEeec------------------CCeEE
Q psy7482         113 ALSVG-K--DKTLRTWNLVKG--RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI------------------QNKAV  169 (327)
Q Consensus       113 l~~~~-~--dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------------~~~i~  169 (327)
                      |+.+. .  +.++.+|+++..  ...........  .....+.+.+.++|.++++..                  .|.++
T Consensus       129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~--~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy  206 (355)
T 3sre_A          129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK--LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT  206 (355)
T ss_dssp             EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCT--TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred             EEEEECCCCCCeEEEEEEECCCCEEEEEeccccC--CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence            54443 2  456778776543  22222222222  234588999999998777642                  13455


Q ss_pred             EEEecCCceeeEecCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCC-Cce--eEEeeecccceEEEEEEecC-CCcEE
Q psy7482         170 VFSVEKAGVLQTLKSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTD-GSH--LWQIKASASRIKGLVFFSIP-QETTV  243 (327)
Q Consensus       170 i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~s~-~~~~l  243 (327)
                      .+|.  ++.......-...+.++|+|| +.+ ++-+..+.|..|++.. ++.  ...+ ...+..-.+++  ++ +|.+.
T Consensus       207 r~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~v--D~e~G~lw  281 (355)
T 3sre_A          207 YYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISV--DPVTGDLW  281 (355)
T ss_dssp             EECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEE--CTTTCCEE
T ss_pred             EEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEE--eCCCCcEE
Confidence            5554  333323334456889999999 444 4556778999999864 322  1223 22344566777  46 48877


Q ss_pred             EEecCC-CeEEEEEc
Q psy7482         244 CTGNEE-SAITAYNL  257 (327)
Q Consensus       244 ~~~~~d-~~i~i~d~  257 (327)
                      +++..+ +.|..|+.
T Consensus       282 va~~~~g~~v~~~~P  296 (355)
T 3sre_A          282 VGCHPNGMRIFFYDA  296 (355)
T ss_dssp             EEEESCHHHHHSCCT
T ss_pred             EEecCCceEEEEECC
Confidence            765433 34444443

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.50  E-value=0.027  Score=45.81  Aligned_cols=220  Identities=15%  Similarity=0.156  Sum_probs=117.6

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccc-ccccc---ccccccEEEEEECCC---CCeEEEecC----C----Cc
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRK-QSGAL---MQHEGTITCLKFTPE---GSHLISCSD----D----GS   77 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~-~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~----d----~~   77 (327)
                      .....|+|  +++++++ ..+|.|++++ .+++ .+..+   .........|+++|+   +..|.++..    +    ..
T Consensus        29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~  106 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR  106 (354)
T ss_dssp             SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred             CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence            44678888  7775554 5569999997 3444 22211   112356889999997   445544432    2    56


Q ss_pred             EEEEEcCCC--e---E--E-EeEEecccCCceeeEEEecCCCEEEEEeCC-------------CCEEEEEcCCCce----
Q psy7482          78 IAIFRVGSW--Q---L--E-KLFKKAHKGTAVNHISIHPSGKLALSVGKD-------------KTLRTWNLVKGRS----  132 (327)
Q Consensus        78 i~iw~~~~~--~---~--~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~~----  132 (327)
                      |..|+....  .   .  + ..+....... ...+.|.|||.+.++.+..             |.|.-++.. ++.    
T Consensus       107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~-~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~n  184 (354)
T 3a9g_A          107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHN-GGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADN  184 (354)
T ss_dssp             EEEEEECSSSCCEEEEEEEEEEEECCSSCC-CCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTS
T ss_pred             EEEEEECCCCcCcCccEEEEEcCCCCCCcC-CceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCC
Confidence            777776543  1   1  1 1121111112 5679999999866664321             345555543 220    


Q ss_pred             ----eeeeeccccCccccceEEEEEcc-CCcEEEeec--C--CeEEEEEecCCc------------------eeeEe-cC
Q psy7482         133 ----AYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI--Q--NKAVVFSVEKAG------------------VLQTL-KS  184 (327)
Q Consensus       133 ----~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~--~~i~i~d~~~~~------------------~~~~~-~~  184 (327)
                          ...+..     .......++|+| ++.++++-.  +  ..|.+..  .+.                  ++..+ ..
T Consensus       185 pf~~~~i~a~-----G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~  257 (354)
T 3a9g_A          185 PFPNSPIWSY-----GHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSE  257 (354)
T ss_dssp             SSTTCCEEEE-----CCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTC
T ss_pred             CCCCCcEEEE-----ccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCC
Confidence                011110     112267899999 677666543  2  2344332  221                  22333 23


Q ss_pred             CCceeEEEee-------cC-ceEEEeCCCCcEEEEEcCCC-cee--EEee-ecccceEEEEEEecCCCcEEEEec
Q psy7482         185 ESKVHSVCFL-------NE-TTVCTGNEESAITAYNLTDG-SHL--WQIK-ASASRIKGLVFFSIPQETTVCTGN  247 (327)
Q Consensus       185 ~~~i~~~~~~-------~~-~~l~~~~~d~~i~i~d~~~~-~~~--~~~~-~~~~~v~~~~~~~s~~~~~l~~~~  247 (327)
                      ...+..+++.       .+ .++++....+.|...++... +..  ..+. .....+..+++  .|+|.+.++..
T Consensus       258 ~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~--~pDG~lyv~~~  330 (354)
T 3a9g_A          258 TWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVI--DDDGGILISTS  330 (354)
T ss_dssp             CCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEE--CTTSCEEEEEC
T ss_pred             CcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEE--CCCCcEEEEEe
Confidence            3457778873       23 44555556678888888753 221  1221 22346778887  47887666553

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.49  E-value=0.011  Score=48.55  Aligned_cols=140  Identities=15%  Similarity=0.202  Sum_probs=86.6

Q ss_pred             EccCCcEEEeecCCeEEEEEecCCceeeEecCC-----CceeEEEeecCceEEEeCCCCcEEEEEcCCCc----------
Q psy7482         153 WSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSE-----SKVHSVCFLNETTVCTGNEESAITAYNLTDGS----------  217 (327)
Q Consensus       153 ~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~-----~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~----------  217 (327)
                      ...+|.-++.+.++.||.-++......+.+..+     ..+..+..+|++.+++-..+..|.|..+..+.          
T Consensus        28 ~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~  107 (452)
T 3pbp_A           28 SSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD  107 (452)
T ss_dssp             EETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred             EEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence            344666666666778887777654444454432     25778888888555555566678888876321          


Q ss_pred             --eeEEeee------cccceEEEEEEe-cCCCcEEEEecCCCeEEEEEcCCCc--eeEEee---------cccCceEEEe
Q psy7482         218 --HLWQIKA------SASRIKGLVFFS-IPQETTVCTGNEESAITAYNLTDGS--HLWHIK---------ASASRIKGLA  277 (327)
Q Consensus       218 --~~~~~~~------~~~~v~~~~~~~-s~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~---------~~~~~v~~~~  277 (327)
                        ..+.+.-      ...+|..+.|+| +..+..|++-..|+.|++||+....  +. .+.         .....|.+++
T Consensus       108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~  186 (452)
T 3pbp_A          108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE  186 (452)
T ss_dssp             TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred             ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence              1122222      246799999984 2346689999999999999998532  22 332         1224677788


Q ss_pred             eeC----cEEEEEecCCcEE
Q psy7482         278 SHR----NHLICITSAGDLV  293 (327)
Q Consensus       278 ~~~----~~l~~~~~dg~v~  293 (327)
                      |.+    -++++.+..|.|+
T Consensus       187 Fg~~~lTLYvl~~t~~GDIY  206 (452)
T 3pbp_A          187 FSKDGLTLYCLNTTEGGDIF  206 (452)
T ss_dssp             ECTTSSCEEEEECTTSCEEE
T ss_pred             EcCCCcEEEEEecCCCCCEE
Confidence            877    2333344556554

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.45  E-value=0.029  Score=44.86  Aligned_cols=221  Identities=12%  Similarity=0.093  Sum_probs=111.1

Q ss_pred             eEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC----CC-------CEEEEEcCCCceeeee
Q psy7482          68 HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK----DK-------TLRTWNLVKGRSAYIT  136 (327)
Q Consensus        68 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~~  136 (327)
                      .++.|+.  .+..||..+.+....- ...............++..++.|+.    ++       .+..||..+.+.....
T Consensus        18 i~~~GG~--~~~~yd~~~~~W~~~~-~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~   94 (318)
T 2woz_A           18 ILLVNDT--AAVAYDPMENECYLTA-LAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP   94 (318)
T ss_dssp             EEEECSS--EEEEEETTTTEEEEEE-ECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred             hhhcccc--ceEEECCCCCceeccc-CCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence            3445553  3889999887754421 1111111222333456778888873    12       1778888877664443


Q ss_pred             eccccCccccceEEEEEccCCcEEEeec-C-------CeEEEEEecCCceeeEec--CCCceeEEEeecCceEEEeCC--
Q psy7482         137 NLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-------NKAVVFSVEKAGVLQTLK--SESKVHSVCFLNETTVCTGNE--  204 (327)
Q Consensus       137 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-------~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~--  204 (327)
                      ..+....   ....+.+  ++++++.|+ +       ..+.+||..+.+-...-.  ....-.+++...+..++.|+.  
T Consensus        95 ~~p~~r~---~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~  169 (318)
T 2woz_A           95 PLPSARC---LFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTD  169 (318)
T ss_dssp             CBSSCBC---SCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEES
T ss_pred             CCCcccc---ccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCC
Confidence            3332211   1222222  566666664 3       357888887765333222  111112333334456666653  


Q ss_pred             ----CCcEEEEEcCCCceeEE--eeecccceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCce--eEEeecccC
Q psy7482         205 ----ESAITAYNLTDGSHLWQ--IKASASRIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGSH--LWHIKASAS  271 (327)
Q Consensus       205 ----d~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~--~~~~~~~~~  271 (327)
                          -..+.+||+.+.+-...  +.... .-.+++.   -+++.++.|+.+     ..+.+||+.+.+-  +..+.....
T Consensus       170 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~  245 (318)
T 2woz_A          170 DKKCTNRVFIYNPKKGDWKDLAPMKTPR-SMFGVAI---HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS  245 (318)
T ss_dssp             SSCBCCCEEEEETTTTEEEEECCCSSCC-BSCEEEE---ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB
T ss_pred             CCCccceEEEEcCCCCEEEECCCCCCCc-ccceEEE---ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc
Confidence                24589999887643221  11111 1112333   366777777643     3577899877652  211211111


Q ss_pred             ceEEEeeeCcEEEEEecC--------------CcEEEEEccCc
Q psy7482         272 RIKGLASHRNHLICITSA--------------GDLVVWELNED  300 (327)
Q Consensus       272 ~v~~~~~~~~~l~~~~~d--------------g~v~iw~~~~~  300 (327)
                      ....+.+...+++.|+.+              ..+.+||+.+.
T Consensus       246 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~  288 (318)
T 2woz_A          246 SISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK  288 (318)
T ss_dssp             SCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred             ceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence            112222333677777654              34778888776

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.36  E-value=0.042  Score=44.67  Aligned_cols=227  Identities=10%  Similarity=0.041  Sum_probs=111.5

Q ss_pred             CCCeEEEecCC-CcEEEEEcCC--CeEEEeEEecc-cCCceeeEEEecCCCEEEEEeC-C---------CCEEEEEcCCC
Q psy7482          65 EGSHLISCSDD-GSIAIFRVGS--WQLEKLFKKAH-KGTAVNHISIHPSGKLALSVGK-D---------KTLRTWNLVKG  130 (327)
Q Consensus        65 ~~~~l~~~~~d-~~i~iw~~~~--~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~iwd~~~~  130 (327)
                      ++..++.|+.+ ..+.++|...  .+.. .+.... ....-.+++. -++++++.|+. +         ..+.+||+.+.
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~-~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~   96 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWT-ALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN   96 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEE-ECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCee-ECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence            56666666543 4688888863  2222 121111 1110112222 25667777765 2         46889999887


Q ss_pred             ceeeeeeccccCccccceEEEEEccCCcEEEeec-C---------------------------------------CeEEE
Q psy7482         131 RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------------------------------------NKAVV  170 (327)
Q Consensus       131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------------------------------------~~i~i  170 (327)
                      +...........  .....++.  .++++++.|+ +                                       ..+.+
T Consensus        97 ~W~~~~~~~p~~--r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  172 (357)
T 2uvk_A           97 SWVKLMSHAPMG--MAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS  172 (357)
T ss_dssp             EEEECSCCCSSC--CSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred             cEEECCCCCCcc--cccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence            655443333110  11122222  5677777765 2                                       57899


Q ss_pred             EEecCCceeeE--ecCCCce-eEEEeecCceEEEeCC------CCcEEEEEc--CCCce--eEEeeecccceE-EEEEEe
Q psy7482         171 FSVEKAGVLQT--LKSESKV-HSVCFLNETTVCTGNE------ESAITAYNL--TDGSH--LWQIKASASRIK-GLVFFS  236 (327)
Q Consensus       171 ~d~~~~~~~~~--~~~~~~i-~~~~~~~~~~l~~~~~------d~~i~i~d~--~~~~~--~~~~~~~~~~v~-~~~~~~  236 (327)
                      ||..+.+-...  +.....- .+++...+.+++.|+.      ...+..||+  .+.+-  +..+........ +++.  
T Consensus       173 yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~--  250 (357)
T 2uvk_A          173 FDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI--  250 (357)
T ss_dssp             EETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE--
T ss_pred             EeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE--
Confidence            99887653332  2222222 4455555566777663      345777876  33221  111111111111 1333  


Q ss_pred             cCCCcEEEEecCC----------------------CeEEEEEcCCCc--eeEEeecccCceEEEeeeCcEEEEEecCC--
Q psy7482         237 IPQETTVCTGNEE----------------------SAITAYNLTDGS--HLWHIKASASRIKGLASHRNHLICITSAG--  290 (327)
Q Consensus       237 s~~~~~l~~~~~d----------------------~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~l~~~~~dg--  290 (327)
                       .++++++.|+.+                      ..+.+||+.+.+  .+..+......-.++.+...+++.|+.++  
T Consensus       251 -~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~  329 (357)
T 2uvk_A          251 -SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGG  329 (357)
T ss_dssp             -ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGG
T ss_pred             -ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCC
Confidence             467777777732                      257889987665  33333322222223334447778888653  


Q ss_pred             ----cEEEEEccCc
Q psy7482         291 ----DLVVWELNED  300 (327)
Q Consensus       291 ----~v~iw~~~~~  300 (327)
                          .|.+++++++
T Consensus       330 ~~~~~v~~l~~~~~  343 (357)
T 2uvk_A          330 KAVTDSVLITVKDN  343 (357)
T ss_dssp             CEEEEEEEEEC-CC
T ss_pred             CEeeeEEEEEEcCc
Confidence                2555577766

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.28  E-value=0.0088  Score=44.44  Aligned_cols=145  Identities=13%  Similarity=0.072  Sum_probs=82.3

Q ss_pred             ceEEEEEccCCcEEEeecCCeEEEEEecCCce------eeEec--CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCce
Q psy7482         147 NLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGV------LQTLK--SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSH  218 (327)
Q Consensus       147 ~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~------~~~~~--~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~  218 (327)
                      .+..++|+|++.+.++ .+|.++-.+..+.+.      -..+.  .-....++.|.|++.|.+. .||.|+-++-.+...
T Consensus        42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~  119 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDT  119 (236)
T ss_dssp             TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTT
T ss_pred             cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCC
Confidence            4789999999998888 888877777655222      12221  1112478899999776666 669888777533211


Q ss_pred             e------EEe-eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc------eeEEee-cccCceEEEeeeC-cEE
Q psy7482         219 L------WQI-KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS------HLWHIK-ASASRIKGLASHR-NHL  283 (327)
Q Consensus       219 ~------~~~-~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~------~~~~~~-~~~~~v~~~~~~~-~~l  283 (327)
                      -      ..+ ..--..+..|.+  .|+|.+.++.  |+.++-.....+.      ....+. ..-..-+-+.|.+ ..|
T Consensus       120 ~~Wl~~a~~vg~~gw~~~~~lff--~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l  195 (236)
T 1tl2_A          120 DNWIARATEVGSGGWSGFKFLFF--HPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL  195 (236)
T ss_dssp             CCHHHHSEEEECSSGGGEEEEEE--CTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred             CceeccccEeccCCCCceEEEEE--CCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence            1      111 111135677777  4899888887  6775433322211      111111 2222344466777 545


Q ss_pred             EEEecCCcEEEEEccCc
Q psy7482         284 ICITSAGDLVVWELNED  300 (327)
Q Consensus       284 ~~~~~dg~v~iw~~~~~  300 (327)
                      ..+. +|  ++|....+
T Consensus       196 ~~v~-~g--~~Y~~~~p  209 (236)
T 1tl2_A          196 FGVQ-GG--KFYEDYPP  209 (236)
T ss_dssp             EEEE-TT--EEEEESCC
T ss_pred             EEEe-CC--eEEecCCc
Confidence            5555 66  45554443

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.21  E-value=0.06  Score=43.48  Aligned_cols=229  Identities=13%  Similarity=0.156  Sum_probs=123.6

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEcccccc--ccc----cccccccEEEEEECCC---CCeEEEe---cCCCcEE
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ--SGA----LMQHEGTITCLKFTPE---GSHLISC---SDDGSIA   79 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~--~~~----~~~~~~~v~~~~~~~~---~~~l~~~---~~d~~i~   79 (327)
                      -...+.|+|  +|.++++--..|.|++++..+++.  +..    +.........|+++|+   +..|...   ..++.|.
T Consensus        31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~  110 (347)
T 3das_A           31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV  110 (347)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred             CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence            345678888  788777765589999998655542  211    1223566899999995   3444432   2344566


Q ss_pred             EEEcCCC----------eEE-EeEEecccCCceeeEEEecCCCEEEEEeC-------------CCCEEEEEcCCCceeee
Q psy7482          80 IFRVGSW----------QLE-KLFKKAHKGTAVNHISIHPSGKLALSVGK-------------DKTLRTWNLVKGRSAYI  135 (327)
Q Consensus        80 iw~~~~~----------~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~~~~  135 (327)
                      -|....+          +.+ ..+....... -..|.|.|||.+.++.+.             .|.|.-.+.. ++...-
T Consensus       111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~-g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~  188 (347)
T 3das_A          111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN-GGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPG  188 (347)
T ss_dssp             EEEBCTTSCTTCCBCCCEEEEEEECCCSSCC-CCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTT
T ss_pred             EEEeCCCCcccccCCCcEEEEEcCCCCCCcc-CccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCC
Confidence            6665441          111 1121111122 567999999987777543             2445545543 221000


Q ss_pred             eec---cccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCc------------------eeeEecCC-CceeEE
Q psy7482         136 TNL---SSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG------------------VLQTLKSE-SKVHSV  191 (327)
Q Consensus       136 ~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~------------------~~~~~~~~-~~i~~~  191 (327)
                      -++   ............++|+|++.++++-.  ++.=.+.-+..+.                  ++..+.+. .....+
T Consensus       189 nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~  268 (347)
T 3das_A          189 NPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGI  268 (347)
T ss_dssp             CSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEE
T ss_pred             CCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcce
Confidence            000   00001112367899999888777653  3322222222222                  12222222 356677


Q ss_pred             EeecCceEEEeCCCCcEEEEEcCCCce----eEEeeecccceEEEEEEecCCCcEEEEe
Q psy7482         192 CFLNETTVCTGNEESAITAYNLTDGSH----LWQIKASASRIKGLVFFSIPQETTVCTG  246 (327)
Q Consensus       192 ~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~s~~~~~l~~~  246 (327)
                      +|.....++..-..+.|....+.....    ...+.+....+..++..  |+|.++++.
T Consensus       269 ~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~--pDG~lyv~t  325 (347)
T 3das_A          269 AYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPA--GGDKLWLVT  325 (347)
T ss_dssp             EEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEE--ETTEEEEEE
T ss_pred             EEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEEC--CCCcEEEEE
Confidence            887655666666667777777655432    12233334678888885  788766654

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=97.20  E-value=0.066  Score=45.20  Aligned_cols=107  Identities=15%  Similarity=0.208  Sum_probs=61.7

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEec-------ccCCceeeEEEecC---CCEEEEEeC------
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA-------HKGTAVNHISIHPS---GKLALSVGK------  118 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~l~~~~~------  118 (327)
                      .....|+|.|+|+++++-...+.|++++..+++........       .... ...|+|+|+   +..|+.+..      
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~G-llgia~~Pdf~~~g~lYv~~s~~~~~~  105 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNG-LLGFAFHPDFKNNPYIYISGTFKNPKS  105 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCS-EEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCc-eeEEEECCCcCcCCEEEEEEeccccCC
Confidence            34679999999987776554457888876555433221111       1233 779999995   555555442      


Q ss_pred             -------CCCEEEEEcCCC--c---eeeee-eccccCccccceEEEEEccCCcEEEeec
Q psy7482         119 -------DKTLRTWNLVKG--R---SAYIT-NLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus       119 -------dg~i~iwd~~~~--~---~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                             ...|.-++...+  +   ....+ .......|  ....+.|.|+|.++++..
T Consensus       106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H--~~~~l~f~pDG~Lyv~~G  162 (454)
T 1cru_A          106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDH--QSGRLVIGPDQKIYYTIG  162 (454)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSC--CEEEEEECTTSCEEEEEC
T ss_pred             CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCC--CCCeEeECCCCeEEEEEC
Confidence                   134666665432  1   11111 12222222  378999999998777643

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.16  E-value=0.02  Score=54.49  Aligned_cols=214  Identities=12%  Similarity=0.125  Sum_probs=132.0

Q ss_pred             CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482          74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW  153 (327)
Q Consensus        74 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  153 (327)
                      ...+|.|-|+.+++.+...  .-.   .-+...+|..+.++.-. ..++.++|+++.+.+....+...      |.-=.|
T Consensus        46 ~~~~vvIidl~~~~~~~rr--pi~---AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~------VvfWkW  113 (1630)
T 1xi4_A           46 EQAQVVIIDMNDPSNPIRR--PIS---ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD------VTFWKW  113 (1630)
T ss_pred             CCceEEEEECCCCCCcccc--ccc---chhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCC------ceEEEe
Confidence            3447899999876654222  111   23345788777776654 68899999998887776666554      666666


Q ss_pred             ccCCcEEEeecCCeEEEEEecC-CceeeEec-----CCCceeEEEeecC-ceEEE-e------CCCCcEEEEEcCCCcee
Q psy7482         154 SPEGLLYAIPIQNKAVVFSVEK-AGVLQTLK-----SESKVHSVCFLNE-TTVCT-G------NEESAITAYNLTDGSHL  219 (327)
Q Consensus       154 ~~~~~~l~~~~~~~i~i~d~~~-~~~~~~~~-----~~~~i~~~~~~~~-~~l~~-~------~~d~~i~i~d~~~~~~~  219 (327)
                      -. .+.++..++..|+-|++.. ..+.+.+.     ....|..-..+++ ..++. |      ...|.+.+|+.+.+ ..
T Consensus       114 is-~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~s  191 (1630)
T 1xi4_A          114 IS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VS  191 (1630)
T ss_pred             cC-CCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cc
Confidence            54 3466777789999999974 33444443     2456766777777 54442 2      24578899998654 34


Q ss_pred             EEeeecccceEEEEEEecCCC-cEEEEec---CCCeEEEEEcCCC---ceeEE------ee---cccCceEEEeeeC--c
Q psy7482         220 WQIKASASRIKGLVFFSIPQE-TTVCTGN---EESAITAYNLTDG---SHLWH------IK---ASASRIKGLASHR--N  281 (327)
Q Consensus       220 ~~~~~~~~~v~~~~~~~s~~~-~~l~~~~---~d~~i~i~d~~~~---~~~~~------~~---~~~~~v~~~~~~~--~  281 (327)
                      +.+.+|.+....+.....+.. ..++.+.   ..+.++|.++...   .+...      +-   ...+-..++..++  .
T Consensus       192 Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g  271 (1630)
T 1xi4_A          192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD  271 (1630)
T ss_pred             hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC
Confidence            556677665544443211122 2222222   2368889888543   11111      11   1123345666777  7


Q ss_pred             EEEEEecCCcEEEEEccCcc
Q psy7482         282 HLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       282 ~l~~~~~dg~v~iw~~~~~~  301 (327)
                      .+...+.-|.+.++|+.++.
T Consensus       272 ~iy~itk~G~~~~~d~~t~~  291 (1630)
T 1xi4_A          272 VVFLITKYGYIHLYDLETGT  291 (1630)
T ss_pred             EEEEEecCceEEEEecccch
Confidence            88889999999999999873

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=97.04  E-value=0.094  Score=42.63  Aligned_cols=229  Identities=10%  Similarity=0.094  Sum_probs=118.1

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccc---ccc----ccccccEEEEEECCC---CCeEEEec-C-------
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS---GAL----MQHEGTITCLKFTPE---GSHLISCS-D-------   74 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~~-~-------   74 (327)
                      .....|+|  +|+.|+.+...|.|++++.. ++..   ..+    .........++++|+   +..|..+. .       
T Consensus        18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~   96 (353)
T 2g8s_A           18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA   96 (353)
T ss_dssp             SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred             CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence            34678888  77724445567999999853 3321   111    112345789999995   44444432 2       


Q ss_pred             CCcEEEEEcCCC--e--EEEeEEec------ccCCceeeEEEecCCCEEEEEeCC-------------CCEEEEEcCCCc
Q psy7482          75 DGSIAIFRVGSW--Q--LEKLFKKA------HKGTAVNHISIHPSGKLALSVGKD-------------KTLRTWNLVKGR  131 (327)
Q Consensus        75 d~~i~iw~~~~~--~--~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~  131 (327)
                      ...|..++....  .  ....+...      .... ...+.|.|||.+.++.+..             |.|.-++....-
T Consensus        97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~-~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~  175 (353)
T 2g8s_A           97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF-GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI  175 (353)
T ss_dssp             EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC-CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred             eeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc-CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence            235666666432  1  11111011      1112 4679999999655554332             356666654210


Q ss_pred             ------------eeeeeeccccCccccceEEEEEcc-CCcEEEeec--CCeEEEEEecCCc-------------------
Q psy7482         132 ------------SAYITNLSSYGVGFENLDSVVWSP-EGLLYAIPI--QNKAVVFSVEKAG-------------------  177 (327)
Q Consensus       132 ------------~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~--~~~i~i~d~~~~~-------------------  177 (327)
                                  ....+..     .......++|+| ++.++++-.  ++.=.+.-+..+.                   
T Consensus       176 p~~npf~~~~~~~~~i~a~-----G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~  250 (353)
T 2g8s_A          176 PDDNPFIKESGVRAEIWSY-----GIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIP  250 (353)
T ss_dssp             CTTCTTTTSTTSCTTEEEE-----CCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCT
T ss_pred             CCCCCCcCCCCCCccEEEE-----cCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccC
Confidence                        0111111     112378899999 666665543  2111221111111                   


Q ss_pred             ------------eeeEecCCCceeEEEeec-------C-ceEEEeCCCCcEEEEEcCCCceeEE--e-eecccceEEEEE
Q psy7482         178 ------------VLQTLKSESKVHSVCFLN-------E-TTVCTGNEESAITAYNLTDGSHLWQ--I-KASASRIKGLVF  234 (327)
Q Consensus       178 ------------~~~~~~~~~~i~~~~~~~-------~-~~l~~~~~d~~i~i~d~~~~~~~~~--~-~~~~~~v~~~~~  234 (327)
                                  +...+.+...+..+.|..       + .++++....+.|...++..++....  + ......+..+++
T Consensus       251 ~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~  330 (353)
T 2g8s_A          251 EAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT  330 (353)
T ss_dssp             TCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred             cccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence                        112223334566777753       2 4555556777888888776543322  1 122346788888


Q ss_pred             EecCCCcEEEEec-CCCeE
Q psy7482         235 FSIPQETTVCTGN-EESAI  252 (327)
Q Consensus       235 ~~s~~~~~l~~~~-~d~~i  252 (327)
                        .|+|.++++.. .+|.|
T Consensus       331 --~pdG~lyv~td~~~g~I  347 (353)
T 2g8s_A          331 --GPDGYLYVLTDESSGEL  347 (353)
T ss_dssp             --CTTSCEEEEECSTTEEE
T ss_pred             --CCCCcEEEEEeCCCCEE
Confidence              48888666533 34433

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=96.91  E-value=0.12  Score=41.82  Aligned_cols=162  Identities=12%  Similarity=0.113  Sum_probs=92.4

Q ss_pred             CCCeEEEEEcccc--ccc-ccccc-----ccccEEEEEECC--CCC-eEEEe-cC--CCcEEEEEcCCC--e--EEEeEE
Q psy7482          32 ADETVVLYDMVKR--KQS-GALMQ-----HEGTITCLKFTP--EGS-HLISC-SD--DGSIAIFRVGSW--Q--LEKLFK   93 (327)
Q Consensus        32 ~dg~v~~w~~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l~~~-~~--d~~i~iw~~~~~--~--~~~~~~   93 (327)
                      .+|.|.++|..+.  +.. ..+.+     ..-....+.+.+  ++. +|+++ ..  +.+|.+|+++..  .  .+..+ 
T Consensus        81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~-  159 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI-  159 (355)
T ss_dssp             -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE-
T ss_pred             CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc-
Confidence            6899999998732  211 11211     223456666655  343 34443 22  567888877543  2  22233 


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeC-----------------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGK-----------------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE  156 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  156 (327)
                      .+..-...+.+.+.++|.+.++...                 .|.|.-+|.  ++......--      ...+.++|+||
T Consensus       160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l------~~pNGia~spD  231 (355)
T 3sre_A          160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGF------DFANGINISPD  231 (355)
T ss_dssp             CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEE------SSEEEEEECTT
T ss_pred             ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCC------cccCcceECCC
Confidence            2222223789999999987766531                 234555554  3222111111      22789999999


Q ss_pred             CcEEEeec--CCeEEEEEecC-Cce--eeEecCCCceeEEEeec-CceEEEe
Q psy7482         157 GLLYAIPI--QNKAVVFSVEK-AGV--LQTLKSESKVHSVCFLN-ETTVCTG  202 (327)
Q Consensus       157 ~~~l~~~~--~~~i~i~d~~~-~~~--~~~~~~~~~i~~~~~~~-~~~l~~~  202 (327)
                      ++.+.++.  .+.|..|++.. ++.  ...+........+++.+ ++.+.++
T Consensus       232 g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva  283 (355)
T 3sre_A          232 GKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVG  283 (355)
T ss_dssp             SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEE
T ss_pred             CCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEE
Confidence            98777764  78999999864 322  22333456678888888 4655553

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=96.86  E-value=0.28  Score=47.04  Aligned_cols=257  Identities=12%  Similarity=0.101  Sum_probs=142.6

Q ss_pred             CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC
Q psy7482          32 ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK  111 (327)
Q Consensus        32 ~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  111 (327)
                      ...+|.|-|+.++..+....   -.--+.-.+|..+.||.-. ..++.|+|+++.+.++.+ .-. .. |..=.|-.+. 
T Consensus        46 ~~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~-~~~-e~-VvfWkWis~~-  117 (1630)
T 1xi4_A           46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH-TMT-DD-VTFWKWISLN-  117 (1630)
T ss_pred             CCceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccc-ccC-CC-ceEEEecCCC-
Confidence            34479999998865442211   1122334678777777654 678999999988777766 222 23 6655666443 


Q ss_pred             EEEEEeCCCCEEEEEcCCC-ceeeeeeccccCccccceEEEEEccCCcEEEeec--------CCeEEEEEecCCceeeEe
Q psy7482         112 LALSVGKDKTLRTWNLVKG-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--------QNKAVVFSVEKAGVLQTL  182 (327)
Q Consensus       112 ~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~i~i~d~~~~~~~~~~  182 (327)
                      .|+..+ +..|.-|++... .+...+..+.. .....|..-..+++.++++..+        .|.+.+|..+.+.....-
T Consensus       118 ~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~-L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ie  195 (1630)
T 1xi4_A          118 TVALVT-DNAVYHWSMEGESQPVKMFDRHSS-LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE  195 (1630)
T ss_pred             eeEEEc-CCeEEEeccCCCCccHHHHhcchh-cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhh
Confidence            454444 357999999642 22222222211 1123477777888888766432        378888887654321111


Q ss_pred             cCCCceeEEEeec--C--ceEEEeC---CCCcEEEEEcCCC---ceeEE-------eee--cccceEEEEEEecCCCcEE
Q psy7482         183 KSESKVHSVCFLN--E--TTVCTGN---EESAITAYNLTDG---SHLWQ-------IKA--SASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       183 ~~~~~i~~~~~~~--~--~~l~~~~---~d~~i~i~d~~~~---~~~~~-------~~~--~~~~v~~~~~~~s~~~~~l  243 (327)
                      .|.+....+....  .  ..++.+.   ..+.+++.++...   .+...       +..  ...-..++..  ++.-..+
T Consensus       196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~v--s~k~g~i  273 (1630)
T 1xi4_A          196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI--SEKHDVV  273 (1630)
T ss_pred             HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEe--ccccCEE
Confidence            1222221221110  0  1222111   2367888887432   11110       111  1112233444  3666777


Q ss_pred             EEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         244 CTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       244 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ..-+.-|.|.+||+.++.++..-+-...+|...+.+.  .-++.....|.|.--.++..
T Consensus       274 y~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~  332 (1630)
T 1xi4_A          274 FLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE  332 (1630)
T ss_pred             EEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEccc
Confidence            7888889999999999998876665555665555443  44555556776666555554

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=96.85  E-value=0.11  Score=40.60  Aligned_cols=238  Identities=9%  Similarity=0.034  Sum_probs=125.5

Q ss_pred             ccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE
Q psy7482          15 ASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        15 ~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~   93 (327)
                      ..|..++. ....++. . ||.|..|-....-.+..-......|..++...+ ..++. . ||.|..|-....-.+.. +
T Consensus        24 ~~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~-P   97 (282)
T 3qhy_B           24 SGVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTV-P   97 (282)
T ss_dssp             SSCCEEEECSSEEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCC-C
T ss_pred             CCCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCC-C
Confidence            35778888 4444444 4 899999975543222111112335666766533 23333 4 89999997653211111 0


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEe
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSV  173 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~  173 (327)
                      ..-... |..++...+  ..+.-. ||.|..|-....-.+.. +..    ....+..++...+..++ .. +|.++.|-.
T Consensus        98 ~~~~~~-v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~-~~~----~~~~i~~i~~G~~~~~~-l~-~G~v~~wG~  166 (282)
T 3qhy_B           98 AEARSG-VDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTV-PAE----AQSGVTALDGGVYTALA-VK-NGGVIAWGD  166 (282)
T ss_dssp             GGGSSS-EEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSC-CGG----GGSSEEEEEECSSEEEE-EE-TTEEEEEEC
T ss_pred             cccCCC-eEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCC-Ccc----CCCCeEEEEcccCEEEE-EE-CCEEEEecC
Confidence            111223 777766543  333344 89999997654222111 111    11237677665444333 33 788888865


Q ss_pred             cCCceee-EecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeE
Q psy7482         174 EKAGVLQ-TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAI  252 (327)
Q Consensus       174 ~~~~~~~-~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i  252 (327)
                      .....+. .......|..++...+..++.  .+|.++.|=......+-.-......|..++.   .....++..  ||.+
T Consensus       167 n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~---G~~h~~al~--~g~v  239 (282)
T 3qhy_B          167 NYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIAS---GEWYSLALK--NGKV  239 (282)
T ss_dssp             CTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEE---CSSCEEEEE--TTEE
T ss_pred             CCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEc---CCCEEEEEE--CCEE
Confidence            4422211 111345677777766655555  5999999976543222111112235677765   334444444  8999


Q ss_pred             EEEEcCCCceeEEeecccCceEEEeeeC
Q psy7482         253 TAYNLTDGSHLWHIKASASRIKGLASHR  280 (327)
Q Consensus       253 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~  280 (327)
                      +.|-.....++..    ...|.+++...
T Consensus       240 ~~wG~n~~gq~~v----~~~v~~iaaG~  263 (282)
T 3qhy_B          240 IAWGSSRTAPSSV----QSGVSSIEAGP  263 (282)
T ss_dssp             EEESTTCCCCGGG----SSCEEEEEECS
T ss_pred             EEecCCCCccccC----CCCcEEEEECc
Confidence            9997554333221    22566666555

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=96.83  E-value=0.12  Score=40.52  Aligned_cols=222  Identities=10%  Similarity=0.057  Sum_probs=119.2

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeee
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI  135 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  135 (327)
                      .|..++.-.. ..++. . ||.|..|-....-.+. ++...... |..++...+. .++. . ||.|..|-....-.+..
T Consensus        25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg-~p~~~~~~-i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~   96 (282)
T 3qhy_B           25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLT-MPAATQSG-VDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTV   96 (282)
T ss_dssp             SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTS-CCGGGGSC-CCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCC
T ss_pred             CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCC-CCccCCCC-EEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCC
Confidence            5667766432 23333 4 8999999765422111 11112223 7777665332 3333 4 89999997654222111


Q ss_pred             eeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCC-ceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcC
Q psy7482         136 TNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKA-GVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLT  214 (327)
Q Consensus       136 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~  214 (327)
                       +...    ...|..++...+.. ++.. +|.++.|-.... +.-........|..++...+..++..  ||.++.|-..
T Consensus        97 -P~~~----~~~v~~ia~G~~hs-~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~--~G~v~~wG~n  167 (282)
T 3qhy_B           97 -PAEA----RSGVDAIAAGAWAS-YALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK--NGGVIAWGDN  167 (282)
T ss_dssp             -CGGG----SSSEEEEEEETTEE-EEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE--TTEEEEEECC
T ss_pred             -Cccc----CCCeEEEECcCCEE-EEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE--CCEEEEecCC
Confidence             0100    12377777765544 4444 899999965442 22111123456777776555444433  6999999765


Q ss_pred             CCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCcEEEEEecCCcEEE
Q psy7482         215 DGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVV  294 (327)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~i  294 (327)
                      ....+..-..-...|..++.   -....++.  .||.++.|-......+..-......|..++......+.-. ||.|+.
T Consensus       168 ~~gqlg~p~~~~~~v~~i~~---G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~-~g~v~~  241 (282)
T 3qhy_B          168 YFGQTTVPAEAQSGVDDVAG---GIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK-NGKVIA  241 (282)
T ss_dssp             TTSTTSCCGGGGSSEEEEEE---CSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE-TTEEEE
T ss_pred             CCCCCCCceecCCCeEEEEe---cCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE-CCEEEE
Confidence            43222111112345777776   44445555  5999999975543222111111235777776663333344 999999


Q ss_pred             EEccCc
Q psy7482         295 WELNED  300 (327)
Q Consensus       295 w~~~~~  300 (327)
                      |-.+..
T Consensus       242 wG~n~~  247 (282)
T 3qhy_B          242 WGSSRT  247 (282)
T ss_dssp             ESTTCC
T ss_pred             ecCCCC
Confidence            987665

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.41  E-value=0.39  Score=41.19  Aligned_cols=216  Identities=10%  Similarity=0.087  Sum_probs=125.6

Q ss_pred             CCCEEEEec-CCCeEEEEEcccccccccccc-ccccEEEEEEC--CCCCeEEEecC-------CCcE---------EE--
Q psy7482          23 TSKLAASSG-ADETVVLYDMVKRKQSGALMQ-HEGTITCLKFT--PEGSHLISCSD-------DGSI---------AI--   80 (327)
Q Consensus        23 ~~~~l~~~~-~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~-------d~~i---------~i--   80 (327)
                      ||++|+.-. .+..|-.-++...++-+.+.- ....+..++|-  |+..|++.++.       ||..         .+  
T Consensus       141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~  220 (638)
T 3sbq_A          141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYN  220 (638)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEE
T ss_pred             eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEE
Confidence            778887766 456677778887766554442 34568888886  67778887764       2221         11  


Q ss_pred             -EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC---------------CEEEEEc-----------------
Q psy7482          81 -FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK---------------TLRTWNL-----------------  127 (327)
Q Consensus        81 -w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------~i~iwd~-----------------  127 (327)
                       .|.++.+....+..  .+. .......+++++.++.+.+.               .+.++++                 
T Consensus       221 ~iD~~tm~v~~Qv~v--~gn-ld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g  297 (638)
T 3sbq_A          221 AIDAETMEMAFQVIV--DGN-LDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGD  297 (638)
T ss_dssp             EEETTTCSEEEEEEE--SSC-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred             EEcCCccEEEEEEEc--CCC-hhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECC
Confidence             12222222222211  112 34455667777777776532               1444443                 


Q ss_pred             --------CC----C-ceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCc------e-------e
Q psy7482         128 --------VK----G-RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG------V-------L  179 (327)
Q Consensus       128 --------~~----~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~------~-------~  179 (327)
                              +.    + .....++.+.      ....+..+|||++++++.  +.++.++|.+...      .       .
T Consensus       298 ~gv~ViD~~~~~~~~~~~~~~iP~pk------sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~  371 (638)
T 3sbq_A          298 SKTPVLDGRKKDGKDSKFTRYVPVPK------NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIV  371 (638)
T ss_dssp             CCCCEEECSCBTTBCCSSEEEEEESS------SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEE
T ss_pred             CCeeEEccccccccCCceEEEEeCCC------CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceE
Confidence                    22    1 1111112222      256788999999998886  8899999987521      1       2


Q ss_pred             eEecCCCceeEEEeecCce-EEEeCCCCcEEEEEcCCC----------ceeEEeeecccceEEEEE---EecCCCcEEEE
Q psy7482         180 QTLKSESKVHSVCFLNETT-VCTGNEESAITAYNLTDG----------SHLWQIKASASRIKGLVF---FSIPQETTVCT  245 (327)
Q Consensus       180 ~~~~~~~~i~~~~~~~~~~-l~~~~~d~~i~i~d~~~~----------~~~~~~~~~~~~v~~~~~---~~s~~~~~l~~  245 (327)
                      ...+..-.....+|.+++. ..+-.-|..|.-|++...          ..+.++..|-.+-...+-   ...++|++|++
T Consensus       372 ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~  451 (638)
T 3sbq_A          372 GEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVA  451 (638)
T ss_dssp             ECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEE
T ss_pred             eeccCCCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEE
Confidence            2333455677889999854 445668999999998653          345555555443222110   00378888887


Q ss_pred             ec
Q psy7482         246 GN  247 (327)
Q Consensus       246 ~~  247 (327)
                      ..
T Consensus       452 ln  453 (638)
T 3sbq_A          452 LS  453 (638)
T ss_dssp             EE
T ss_pred             ec
Confidence            53

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=95.88  E-value=0.56  Score=42.04  Aligned_cols=157  Identities=11%  Similarity=0.077  Sum_probs=84.3

Q ss_pred             EEEe--CCCEEEEecCC------CeEEEEEccccccc--cccccccccEEEEEECCCCCeEEEecCCC--cEEEEEcCCC
Q psy7482          19 SVAA--TSKLAASSGAD------ETVVLYDMVKRKQS--GALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSW   86 (327)
Q Consensus        19 ~~~~--~~~~l~~~~~d------g~v~~w~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~   86 (327)
                      ++..  ++.+++.||.+      ..+.+||..+.+..  ..+...... .+++...+++.++.|+.++  .+.+||..+.
T Consensus       445 ~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~  523 (695)
T 2zwa_A          445 FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEE  523 (695)
T ss_dssp             EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTT
T ss_pred             EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCC
Confidence            4455  77777787754      35788888775432  222211111 2223323778888887755  6899999887


Q ss_pred             eEEEeEEe--cc-cCCceeeEEEecC-CCEEEEEeC--C-----CCEEEEEcCCCc------eeeeeeccccCccccceE
Q psy7482          87 QLEKLFKK--AH-KGTAVNHISIHPS-GKLALSVGK--D-----KTLRTWNLVKGR------SAYITNLSSYGVGFENLD  149 (327)
Q Consensus        87 ~~~~~~~~--~~-~~~~v~~~~~~~~-~~~l~~~~~--d-----g~i~iwd~~~~~------~~~~~~~~~~~~~~~~v~  149 (327)
                      +....-..  .. ......++.+..+ ++.++.|+.  +     ..+..||+.+.+      .......+...  .. -.
T Consensus       524 ~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~--R~-~~  600 (695)
T 2zwa_A          524 IFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQ--RY-GS  600 (695)
T ss_dssp             EEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGC--CB-SC
T ss_pred             ceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCC--cc-cc
Confidence            65433210  01 1110223455554 667777765  2     358899998877      22222211110  01 11


Q ss_pred             EEEEccCCcEEEeec-C--------CeEEEEEecCCcee
Q psy7482         150 SVVWSPEGLLYAIPI-Q--------NKAVVFSVEKAGVL  179 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~-~--------~~i~i~d~~~~~~~  179 (327)
                      ++....++++++.|+ +        ..+.+||..+.+-.
T Consensus       601 ~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~  639 (695)
T 2zwa_A          601 QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT  639 (695)
T ss_dssp             EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred             eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence            233333366666664 2        35889998876543

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=95.79  E-value=0.74  Score=38.83  Aligned_cols=103  Identities=9%  Similarity=0.115  Sum_probs=58.6

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEcccccc--ccccc------cccccEEEEEECCC---CCeEEEecC-------
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ--SGALM------QHEGTITCLKFTPE---GSHLISCSD-------   74 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~--~~~~~------~~~~~v~~~~~~~~---~~~l~~~~~-------   74 (327)
                      ...+.|+|  +|+++++-...+.|++++..+++.  +..+.      ........|+|+|+   +..|..+..       
T Consensus        27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~  106 (454)
T 1cru_A           27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST  106 (454)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred             CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence            35668998  788777655445788887654432  22221      12456789999995   455544332       


Q ss_pred             ------CCcEEEEEcCCC--eE--EEe----EEecccCCceeeEEEecCCCEEEEEeC
Q psy7482          75 ------DGSIAIFRVGSW--QL--EKL----FKKAHKGTAVNHISIHPSGKLALSVGK  118 (327)
Q Consensus        75 ------d~~i~iw~~~~~--~~--~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~  118 (327)
                            ...|.-++....  +.  ...    +....... ...|.|.|||.+.++.+.
T Consensus       107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~-~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQ-SGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCC-EEEEEECTTSCEEEEECC
T ss_pred             ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCC-CCeEeECCCCeEEEEECC
Confidence                  124555554321  11  111    21111223 788999999987777553

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=95.68  E-value=0.9  Score=39.03  Aligned_cols=223  Identities=13%  Similarity=0.127  Sum_probs=128.6

Q ss_pred             EEEecCCCeEEEEEcccccccccccc-------------------------ccccE--EEEEECC---CCCeEEEecC-C
Q psy7482          27 AASSGADETVVLYDMVKRKQSGALMQ-------------------------HEGTI--TCLKFTP---EGSHLISCSD-D   75 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~~~~~~~~~~-------------------------~~~~v--~~~~~~~---~~~~l~~~~~-d   75 (327)
                      |.+|+..|.|+|+-+.+++.+..+.-                         ..+..  ..+.+..   ||++|+.-.. +
T Consensus        73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan  152 (638)
T 3sbq_A           73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN  152 (638)
T ss_dssp             EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence            77999999999999988765543210                         00111  1233332   5777877654 5


Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEe--cCCCEEEEEeC-------CCCEE---------E---EEcCCCceee
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH--PSGKLALSVGK-------DKTLR---------T---WNLVKGRSAY  134 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------dg~i~---------i---wd~~~~~~~~  134 (327)
                      ..|...+++..+..+.+....... +..+.|-  |+..+++.+++       ||...         +   .|..+.+...
T Consensus       153 ~RvAri~l~~~~~d~Ii~iPn~~~-~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~  231 (638)
T 3sbq_A          153 SRVARIRLDIMKCDKMITVPNVQA-IHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF  231 (638)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCSC-EEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred             cceEEEECCcEeeceeEeCCCCcC-cccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence            678888999888888775455555 8999987  67888888875       33311         1   1222222222


Q ss_pred             eeeccccCccccceEEEEEccCCcEEEeec-C---------------CeEEEEE-------------------------e
Q psy7482         135 ITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q---------------NKAVVFS-------------------------V  173 (327)
Q Consensus       135 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---------------~~i~i~d-------------------------~  173 (327)
                      .......      ...+...+++.+.++.+ +               ..+.+++                         .
T Consensus       232 Qv~v~gn------ld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~  305 (638)
T 3sbq_A          232 QVIVDGN------LDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDG  305 (638)
T ss_dssp             EEEESSC------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEEC
T ss_pred             EEEcCCC------hhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcc
Confidence            2222211      22233344454443321 0               1234444                         3


Q ss_pred             cC----C-ceeeEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCc------e-------eEEeeecccceEEEE
Q psy7482         174 EK----A-GVLQTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGS------H-------LWQIKASASRIKGLV  233 (327)
Q Consensus       174 ~~----~-~~~~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~------~-------~~~~~~~~~~v~~~~  233 (327)
                      +.    + .....+........+..+|| .+ ++.|-.+.++.++|++...      .       ..+.+.. ......+
T Consensus       306 ~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G-lGPlHt~  384 (638)
T 3sbq_A          306 RKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG-LGPLHTT  384 (638)
T ss_dssp             SCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-SCEEEEE
T ss_pred             ccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-CcccEEE
Confidence            32    1 12222233445667888999 44 4456678999999987421      1       2222322 2356677


Q ss_pred             EEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         234 FFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       234 ~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      |  +++|....+---|..|.-|++..
T Consensus       385 F--d~~G~aYTtlfidSqvvkWni~~  408 (638)
T 3sbq_A          385 F--DGRGNAYTTLFIDSQVVKWNMEE  408 (638)
T ss_dssp             E--CSSSEEEEEETTTTEEEEEEHHH
T ss_pred             E--CCCCceEeeeeecceEEEEeccH
Confidence            8  48887777778899999999865

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=93.42  E-value=2.8  Score=34.43  Aligned_cols=290  Identities=10%  Similarity=-0.008  Sum_probs=130.7

Q ss_pred             CCEEEEecCCCeEEEEEccc-ccccccc--ccccccEEEEEECC-CCCeEEEecCCC----cEEEEEcCCCeEEEeEEec
Q psy7482          24 SKLAASSGADETVVLYDMVK-RKQSGAL--MQHEGTITCLKFTP-EGSHLISCSDDG----SIAIFRVGSWQLEKLFKKA   95 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~-~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~----~i~iw~~~~~~~~~~~~~~   95 (327)
                      ...|..|...| +.+++... ++.-..+  ......|.+|++.| +...|..++..|    .|... ...++.-..+...
T Consensus        22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~   99 (394)
T 3b7f_A           22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRP   99 (394)
T ss_dssp             CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBC
T ss_pred             CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCcc
Confidence            44677777777 55554332 2211111  11245699999998 334455555444    33332 2222221111010


Q ss_pred             -----c-------cCCceeeEEEec-C-CCEEEEEeCCCCEEEEEcCCCceeeeee-cc--cc-----------Cccccc
Q psy7482          96 -----H-------KGTAVNHISIHP-S-GKLALSVGKDKTLRTWNLVKGRSAYITN-LS--SY-----------GVGFEN  147 (327)
Q Consensus        96 -----~-------~~~~v~~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~--~~-----------~~~~~~  147 (327)
                           .       ....|.++++.| + ...+..+...+.|...+- .++.-.... ..  ..           ......
T Consensus       100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~  178 (394)
T 3b7f_A          100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK  178 (394)
T ss_dssp             CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred             ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCc
Confidence                 0       001277888886 2 456666666665554432 222211111 10  00           001224


Q ss_pred             eEEEEEccC--CcEEEeecCCeEEEEEecCCceeeEecC--------------CCceeEEEeecC--ceEEEeCCCCcEE
Q psy7482         148 LDSVVWSPE--GLLYAIPIQNKAVVFSVEKAGVLQTLKS--------------ESKVHSVCFLNE--TTVCTGNEESAIT  209 (327)
Q Consensus       148 v~~~~~~~~--~~~l~~~~~~~i~i~d~~~~~~~~~~~~--------------~~~i~~~~~~~~--~~l~~~~~d~~i~  209 (327)
                      +.++.++|.  +.+++...++.+...+ ..++....+..              ...+.++.+.|+  +.++++...+ |.
T Consensus       179 i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~  256 (394)
T 3b7f_A          179 MHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IY  256 (394)
T ss_dssp             EEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EE
T ss_pred             eeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EE
Confidence            788999883  3444444455554432 22332222211              124788999886  6777776554 43


Q ss_pred             EEEcCCCceeEEeee--cc---cceEEEEEEecCCCcEEEEecC-----------CCeEEEEEcCCC-ceeEEee-cccC
Q psy7482         210 AYNLTDGSHLWQIKA--SA---SRIKGLVFFSIPQETTVCTGNE-----------ESAITAYNLTDG-SHLWHIK-ASAS  271 (327)
Q Consensus       210 i~d~~~~~~~~~~~~--~~---~~v~~~~~~~s~~~~~l~~~~~-----------d~~i~i~d~~~~-~~~~~~~-~~~~  271 (327)
                      ..+ ..++.-..+..  ..   ..+..+++.+ .+...+.++..           ++...+|...++ +.-..+. +-..
T Consensus       257 ~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p-~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~  334 (394)
T 3b7f_A          257 RMD-RREGVWKRIGDAMPREVGDIGFPIVVHQ-RDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT  334 (394)
T ss_dssp             EEE-TTTTEEECGGGGSCTTTCSCEEEEEECS-SCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred             EeC-CCCCcceECCCCCCCCCccceEEEEECC-CCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence            333 22332222211  11   2345666642 13333444321           333456655543 3222221 1110


Q ss_pred             -------ceEEEeeeC---cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         272 -------RIKGLASHR---NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       272 -------~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                             ....++++|   ..|+.++.++.|..  ..... +....+...  -..+.+++|..+
T Consensus       335 ~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~--S~D~G-~tW~~~~~~--lp~~~~v~~~~~  393 (394)
T 3b7f_A          335 DQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWA--SADEG-EHWQCIASH--LPHIYAVQSARP  393 (394)
T ss_dssp             SSCCCCCCTBSEEECCSSSCCEEEECTTSCEEE--ESSTT-SBCEEEECS--CSCEEEEEEECC
T ss_pred             ccccceEEEEEEEECCCCCCEEEEEeCCCeEEE--ECCCC-CCceEcccC--CCCeeEEEEecC
Confidence                   013577766   45666766665543  22221 244444322  234778887653

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=91.85  E-value=8.3  Score=36.04  Aligned_cols=40  Identities=13%  Similarity=0.162  Sum_probs=34.0

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccc
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSS  140 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  140 (327)
                      +.++...++..++++-+.|+++++|++.+++++....+..
T Consensus       238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~  277 (950)
T 4gq2_M          238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ  277 (950)
T ss_dssp             EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCC
T ss_pred             EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccc
Confidence            6677777788899999999999999999999887766543

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=91.81  E-value=5.3  Score=33.73  Aligned_cols=106  Identities=11%  Similarity=0.158  Sum_probs=58.3

Q ss_pred             cEEEEEECCCCC-eEEEecCCCcEEEEEcCCCe---EEEeEE----ec----ccCCceeeEEEecC---CCEEEEE-eC-
Q psy7482          56 TITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQ---LEKLFK----KA----HKGTAVNHISIHPS---GKLALSV-GK-  118 (327)
Q Consensus        56 ~v~~~~~~~~~~-~l~~~~~d~~i~iw~~~~~~---~~~~~~----~~----~~~~~v~~~~~~~~---~~~l~~~-~~-  118 (327)
                      ....|+|.|++. .|+++...|.|++++.....   .+..+.    .+    .... ...|+++|+   ..+|+.. +. 
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~G-llgia~~P~f~~n~~lYv~yt~~   93 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERG-LLSLAFHPNYKKNGKLYVSYTTN   93 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCS-EEEEEECTTHHHHCEEEEEEEEC
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCc-ceeeEeCCCCcCCCEEEEEEeCC
Confidence            457899999986 56666778999999754221   111110    10    1234 788999996   2333333 22 


Q ss_pred             -C----------CCEEEEEcCCC--------ceeeeeecc-ccCccccceEEEEEccCCcEEEeec
Q psy7482         119 -D----------KTLRTWNLVKG--------RSAYITNLS-SYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus       119 -d----------g~i~iwd~~~~--------~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                       +          ..|.-|.+..+        +....+... ....|.  ...|.|.|||.++++..
T Consensus        94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~--g~~l~fgpDG~LYv~~G  157 (463)
T 2wg3_C           94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL--GGQLLFGPDGFLYIILG  157 (463)
T ss_dssp             CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC--EEEEEECTTSCEEEEEC
T ss_pred             CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc--CCcEeECCCCcEEEEeC
Confidence             1          13444655421        111122222 122232  78999999998777654

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=91.35  E-value=4.7  Score=32.21  Aligned_cols=227  Identities=8%  Similarity=0.063  Sum_probs=120.9

Q ss_pred             CCEEEEecCCCeEEEEEcccccc---------ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEc---C------C
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQ---------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV---G------S   85 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~---~------~   85 (327)
                      ...+++-+.+|.|+--.+.+.+.         -..++ ..+.+..+........|+.-+..|.++-...   .      .
T Consensus         3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~   81 (327)
T 3uc1_A            3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR   81 (327)
T ss_dssp             CEEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred             ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence            34677888888888766443221         11222 2334444444444556666666777665543   2      1


Q ss_pred             CeEEEeE-EecccCCceeeEEEec---CCCEEEEEeCCCCEEEEEcCCCce-----eeeeeccccCccccceEEEE-Ecc
Q psy7482          86 WQLEKLF-KKAHKGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKGRS-----AYITNLSSYGVGFENLDSVV-WSP  155 (327)
Q Consensus        86 ~~~~~~~-~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~-~~~  155 (327)
                      |..+..+ ....... |..+...+   +..+++.++.+|.++--.+..-..     ...+.+..    .+.+..+. .+.
T Consensus        82 G~~i~~~l~l~~~e~-i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke----~D~lv~~~~~~~  156 (327)
T 3uc1_A           82 GQHVANLLAFQPEER-IAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD----NDELVGAVLCSA  156 (327)
T ss_dssp             CEEHHHHTTCCTTCC-EEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT----TCCEEEEEEECT
T ss_pred             CEEHHHccCCCCCCE-EEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC----CCEEEEEEEecC
Confidence            2222111 1112233 66554433   467899999999999988754222     11122222    12244443 344


Q ss_pred             CCcEEEeecCCeEEEEEec--C---------CceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCc------
Q psy7482         156 EGLLYAIPIQNKAVVFSVE--K---------AGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGS------  217 (327)
Q Consensus       156 ~~~~l~~~~~~~i~i~d~~--~---------~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~------  217 (327)
                      +..+++....|.+..+...  .         |...-.+.....|.++...++ ..++..+..|.++.-.+..-.      
T Consensus       157 ~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~  236 (327)
T 3uc1_A          157 GDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGG  236 (327)
T ss_dssp             TCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred             CCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCC
Confidence            4556666668888888766  2         111222334556776665544 688889999999888764321      


Q ss_pred             -eeEEee--ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         218 -HLWQIK--ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       218 -~~~~~~--~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                       -+..++  ...+.+..+...  .+...++..+.+|.+.-++..
T Consensus       237 ~G~~~~~l~~~~d~lv~~~~~--~~~~~i~l~T~~G~~ir~~~~  278 (327)
T 3uc1_A          237 KGVLTVMYDRRRGRLVGALIV--DDDSELYAVTSGGGVIRTAAR  278 (327)
T ss_dssp             CCEESSCCCTTTCSEEEEEEE--CTTCEEEEEEGGGCEEEEEGG
T ss_pred             CcEEEEEecCCCCeEEEEEEe--CCCccEEEEcCCCeEEEEehh
Confidence             122222  112334444432  344455556666777666654

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=90.79  E-value=6.8  Score=33.08  Aligned_cols=104  Identities=13%  Similarity=0.097  Sum_probs=56.8

Q ss_pred             ccEEEEEe--CCC-EEEEecCCCeEEEEEccccc---cccccc---------cccccEEEEEECCC----CCeEEEecC-
Q psy7482          15 ASVRSVAA--TSK-LAASSGADETVVLYDMVKRK---QSGALM---------QHEGTITCLKFTPE----GSHLISCSD-   74 (327)
Q Consensus        15 ~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~---~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~-   74 (327)
                      ..-+.|+|  ++. .|+++...|.|++++.....   .+..+.         ........|+|+|+    +.+.++-+. 
T Consensus        14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~   93 (463)
T 2wg3_C           14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN   93 (463)
T ss_dssp             SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred             CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence            34568888  664 34555678999999753221   111111         11456889999996    433333221 


Q ss_pred             -C----------CcEEEEEcCC----------CeEEEeEEe-cccCCceeeEEEecCCCEEEEEeCC
Q psy7482          75 -D----------GSIAIFRVGS----------WQLEKLFKK-AHKGTAVNHISIHPSGKLALSVGKD  119 (327)
Q Consensus        75 -d----------~~i~iw~~~~----------~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d  119 (327)
                       +          ..|.-|.+..          .+.+..+.. ..... -..|.|.|||.+.++.+..
T Consensus        94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~-g~~l~fgpDG~LYv~~Gd~  159 (463)
T 2wg3_C           94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHL-GGQLLFGPDGFLYIILGDG  159 (463)
T ss_dssp             CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSC-EEEEEECTTSCEEEEECCT
T ss_pred             CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCccc-CCcEeECCCCcEEEEeCCC
Confidence             1          1344455532          122323321 11222 6789999999877776653

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=90.28  E-value=5.6  Score=31.32  Aligned_cols=173  Identities=10%  Similarity=0.068  Sum_probs=92.0

Q ss_pred             EEEEeCCCEEEEecCC--------------CeEEEEEccccccccccccccccEEEEEECCCCCeEEEec--CC--CcEE
Q psy7482          18 RSVAATSKLAASSGAD--------------ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS--DD--GSIA   79 (327)
Q Consensus        18 ~~~~~~~~~l~~~~~d--------------g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d--~~i~   79 (327)
                      ..+..++++|+-....              ..|+..++...+.. .+..  ..  +..|+++++.|+-..  .+  ..|.
T Consensus        58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy  132 (302)
T 3s25_A           58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDP--DP--CIYASLIGNYIYYLHYDTQTATSLY  132 (302)
T ss_dssp             EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEEC--SC--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred             eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eeec--CC--ccEEEEeCCEEEEEeecCCCCceEE
Confidence            3444477777655432              35777777655432 2321  11  225677888888665  33  4455


Q ss_pred             EEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCc
Q psy7482          80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGL  158 (327)
Q Consensus        80 iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  158 (327)
                      ..++...+ ...+ ..+.   +  ..++++++.|+-.+. ...|...++..+......  ...      .. ..+.|++.
T Consensus       133 ~~~~dGs~-~~~l-t~~~---~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~--~~~------~~-~~~~P~g~  196 (302)
T 3s25_A          133 RIRIDGEE-KKKI-KNHY---L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY--DCN------CY-KPVVLDDT  196 (302)
T ss_dssp             EEETTSCC-CEEE-ESSC---C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE--CSC------EE-EEEEEETT
T ss_pred             EEECCCCC-eEEE-eCCC---c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe--CCC------cc-ceeeecCC
Confidence            55655333 3334 2222   2  345677888876655 577888887765543332  211      21 23558888


Q ss_pred             EEEeec--C-CeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEe--CCCCcEEEEEcCC
Q psy7482         159 LYAIPI--Q-NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTG--NEESAITAYNLTD  215 (327)
Q Consensus       159 ~l~~~~--~-~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~--~~d~~i~i~d~~~  215 (327)
                      .|+-..  + ..|..-++.... ...+. ...+..  ++|+ ++|.-+  ...+.|..-++.-
T Consensus       197 ~iy~t~~~~~~~I~~~~ldG~~-~~~Lt-~~~~~~--~~~~g~~Iy~~~~~~~~~i~~~~~DG  255 (302)
T 3s25_A          197 NVYYMDVNRDNAIVHVNINNPN-PVVLT-EANIEH--YNVYGSLIFYQRGGDNPALCVVKNDG  255 (302)
T ss_dssp             EEEEEEGGGTTEEEEECSSSCC-CEECS-CSCEEE--EEEETTEEEEEECSSSCEEEEEETTS
T ss_pred             EEEEEEcCCCcEEEEEECCCCC-eEEEe-CCCcce--EEECCCEEEEEECCCCcEEEEEECCC
Confidence            777654  2 366666666544 33332 233333  5565 444433  3345666666643

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=89.63  E-value=9.1  Score=35.76  Aligned_cols=38  Identities=11%  Similarity=0.203  Sum_probs=30.9

Q ss_pred             ceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482         228 RIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       228 ~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  267 (327)
                      .+.+++..  ++..++++-+.|+++++|++.+++++.+..
T Consensus       237 ~~~~~~~~--~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          237 TIISMIFL--STYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             CEEEEEEE--TTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             eEEEEeec--CCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            34555553  788899999999999999999999887654

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=87.89  E-value=10  Score=31.05  Aligned_cols=260  Identities=11%  Similarity=-0.000  Sum_probs=118.5

Q ss_pred             CccEEEEEeC---CCEEEEecCCC----eEEEEEccccc---cccc---ccc--------ccccEEEEEECCC--CCeEE
Q psy7482          14 TASVRSVAAT---SKLAASSGADE----TVVLYDMVKRK---QSGA---LMQ--------HEGTITCLKFTPE--GSHLI   70 (327)
Q Consensus        14 ~~~v~~~~~~---~~~l~~~~~dg----~v~~w~~~~~~---~~~~---~~~--------~~~~v~~~~~~~~--~~~l~   70 (327)
                      ...|.+|+++   ...|..++..|    .|...+ ..++   .+..   +..        ....|.++++.|.  ...|.
T Consensus        54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~  132 (394)
T 3b7f_A           54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY  132 (394)
T ss_dssp             TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred             CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence            3568999983   55566565554    343332 2222   1111   111        1135788999872  45666


Q ss_pred             EecCCCcEEEEEcCCCeEEEeEEec-----------------ccCCceeeEEEec-CCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          71 SCSDDGSIAIFRVGSWQLEKLFKKA-----------------HKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        71 ~~~~d~~i~iw~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      .++..+.|...+ ..++.-..+...                 .....+.+|.+.| +...++.+..++.|...+ ..++.
T Consensus       133 ~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~t  210 (394)
T 3b7f_A          133 AGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTD  210 (394)
T ss_dssp             EEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSS
T ss_pred             EEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCC
Confidence            666565554432 122221122000                 0112378899987 344555555444444432 22322


Q ss_pred             eeeeeccccCc--------cccceEEEEEccC-CcEEEeecCCeEEEEEecCCceeeEec--C-C---CceeEEEeecC-
Q psy7482         133 AYITNLSSYGV--------GFENLDSVVWSPE-GLLYAIPIQNKAVVFSVEKAGVLQTLK--S-E---SKVHSVCFLNE-  196 (327)
Q Consensus       133 ~~~~~~~~~~~--------~~~~v~~~~~~~~-~~~l~~~~~~~i~i~d~~~~~~~~~~~--~-~---~~i~~~~~~~~-  196 (327)
                      -..........        ....+.++.+.|+ ...+.++..+.|...+- .++....+.  . .   ..+..+.++|. 
T Consensus       211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~  289 (394)
T 3b7f_A          211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRD  289 (394)
T ss_dssp             CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSC
T ss_pred             ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCC-CCCcceECCCCCCCCCccceEEEEECCCC
Confidence            11111100000        0123888999986 34555566555555442 233333322  1 1   33567788763 


Q ss_pred             -ceEEEeCC-----------CCcEEEEEcCCC-ceeEEeee---ccc-----ceEEEEEEecCCCcEEEEecCCCeEEEE
Q psy7482         197 -TTVCTGNE-----------ESAITAYNLTDG-SHLWQIKA---SAS-----RIKGLVFFSIPQETTVCTGNEESAITAY  255 (327)
Q Consensus       197 -~~l~~~~~-----------d~~i~i~d~~~~-~~~~~~~~---~~~-----~v~~~~~~~s~~~~~l~~~~~d~~i~i~  255 (327)
                       +.++++..           ++...+|...++ +.-..+..   ...     ....+++.+ .+...|+.++.++.|..-
T Consensus       290 ~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p-~~~~~l~~g~~~g~l~~S  368 (394)
T 3b7f_A          290 PRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADA-HAPVGVYFGTTGGEIWAS  368 (394)
T ss_dssp             TTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECC-SSSCCEEEECTTSCEEEE
T ss_pred             CCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECC-CCCCEEEEEeCCCeEEEE
Confidence             55555431           333456665543 22222210   000     013466642 234556666656655443


Q ss_pred             EcCCCceeEEeecccCceEEEeee
Q psy7482         256 NLTDGSHLWHIKASASRIKGLASH  279 (327)
Q Consensus       256 d~~~~~~~~~~~~~~~~v~~~~~~  279 (327)
                      + ..++.-..+..+-..+.+++|.
T Consensus       369 ~-D~G~tW~~~~~~lp~~~~v~~~  391 (394)
T 3b7f_A          369 A-DEGEHWQCIASHLPHIYAVQSA  391 (394)
T ss_dssp             S-STTSBCEEEECSCSCEEEEEEE
T ss_pred             C-CCCCCceEcccCCCCeeEEEEe
Confidence            2 3344333444444456777664

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=86.46  E-value=11  Score=30.06  Aligned_cols=156  Identities=9%  Similarity=0.066  Sum_probs=89.2

Q ss_pred             CccEEEEEe-----CCCEEEEecCCCeEEEEEcccccc-------ccccccccccEEEEEECCCCCeEEEecCCCcEEEE
Q psy7482          14 TASVRSVAA-----TSKLAASSGADETVVLYDMVKRKQ-------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF   81 (327)
Q Consensus        14 ~~~v~~~~~-----~~~~l~~~~~dg~v~~w~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw   81 (327)
                      ...|.++..     +..+++..+.+|.++--.+.....       ...+.. .+.+..+........|+..+..|.+..+
T Consensus        94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf  172 (327)
T 3uc1_A           94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRF  172 (327)
T ss_dssp             TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred             CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence            344555544     367899999999999988765322       223433 3445555444455678888889988888


Q ss_pred             EcC--CCeE-------EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc-------eeeeeeccccCccc
Q psy7482          82 RVG--SWQL-------EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR-------SAYITNLSSYGVGF  145 (327)
Q Consensus        82 ~~~--~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~  145 (327)
                      ...  .-..       ...+....... |.++...+++..++..+..|.++.-.+..-.       -...+.+...   .
T Consensus       173 ~~~~~eip~~gr~a~Gv~~i~L~~~d~-Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~---~  248 (327)
T 3uc1_A          173 SATDEALRPMGRATSGVQGMRFNIDDR-LLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRR---R  248 (327)
T ss_dssp             ECCTTTSCCCCTTSBCEESSCCCTTCC-EEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTT---T
T ss_pred             ECcccccCcCCcCCCCeeeecCCCCCE-EEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCC---C
Confidence            776  2111       11121122333 7777666666788999999999888764321       1222222211   1


Q ss_pred             cceEEEE-EccCCcEEEeecCCeEEEEEec
Q psy7482         146 ENLDSVV-WSPEGLLYAIPIQNKAVVFSVE  174 (327)
Q Consensus       146 ~~v~~~~-~~~~~~~l~~~~~~~i~i~d~~  174 (327)
                      +.+..+. ..++..+++...+|.+..++..
T Consensus       249 d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~  278 (327)
T 3uc1_A          249 GRLVGALIVDDDSELYAVTSGGGVIRTAAR  278 (327)
T ss_dssp             CSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred             CeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence            1233333 3344455566667777666654

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=85.37  E-value=20  Score=32.15  Aligned_cols=229  Identities=13%  Similarity=0.084  Sum_probs=114.4

Q ss_pred             EEEeCCCEEEEe----cCC-CeEEEEEccccccccc-cc-cccc------cEEEEEECCCCCeEEEe----------cCC
Q psy7482          19 SVAATSKLAASS----GAD-ETVVLYDMVKRKQSGA-LM-QHEG------TITCLKFTPEGSHLISC----------SDD   75 (327)
Q Consensus        19 ~~~~~~~~l~~~----~~d-g~v~~w~~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~----------~~d   75 (327)
                      |+..++++++.+    |+| ..++++|+.+++.+.. +. .-+.      ....++|..++..+++.          +..
T Consensus       136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~  215 (711)
T 4hvt_A          136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP  215 (711)
T ss_dssp             ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred             ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence            344477776643    222 4699999999887642 22 0000      11334676333333321          122


Q ss_pred             CcEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCE-----EEEEeCC---CCEEEEEcCC--CceeeeeeccccCc
Q psy7482          76 GSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKL-----ALSVGKD---KTLRTWNLVK--GRSAYITNLSSYGV  143 (327)
Q Consensus        76 ~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~-----l~~~~~d---g~i~iwd~~~--~~~~~~~~~~~~~~  143 (327)
                      ..|+.|.+.+..  -...+ ......--.....++++++     +++.+.+   ..+.+.+...  ++. ..+..+..  
T Consensus       216 ~~v~~~~~Gt~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~--  291 (711)
T 4hvt_A          216 NSLYIWKRGESIEKAKKLF-EVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINMPSD--  291 (711)
T ss_dssp             CEEEEEETTSCGGGCEEEE-ECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCSCTT--
T ss_pred             CEEEEEECCCChHHCeEEe-ccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeecCCc--
Confidence            568888886643  22333 2222221233445556652     4443322   3456666543  321 12222221  


Q ss_pred             cccceEEEEEccCCcEEEee-----------cCCeEEEEEecCCc-------eeeE-ec--CCCceeEEEeecCceEEEe
Q psy7482         144 GFENLDSVVWSPEGLLYAIP-----------IQNKAVVFSVEKAG-------VLQT-LK--SESKVHSVCFLNETTVCTG  202 (327)
Q Consensus       144 ~~~~v~~~~~~~~~~~l~~~-----------~~~~i~i~d~~~~~-------~~~~-~~--~~~~i~~~~~~~~~~l~~~  202 (327)
                          . .+....++.+++..           ..+.|...|+.++.       .... +.  ....+..+.+..+.++++.
T Consensus       292 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~  366 (711)
T 4hvt_A          292 ----A-TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLAT  366 (711)
T ss_dssp             ----C-EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEE
T ss_pred             ----c-eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEE
Confidence                1 12334456555532           25678889887642       1222 43  3456778888888777777


Q ss_pred             CCCCc--EEEEEcCCCc-eeEE-eeec-ccceEEEEEEecCCCc-EEEEec---CCCeEEEEEcC
Q psy7482         203 NEESA--ITAYNLTDGS-HLWQ-IKAS-ASRIKGLVFFSIPQET-TVCTGN---EESAITAYNLT  258 (327)
Q Consensus       203 ~~d~~--i~i~d~~~~~-~~~~-~~~~-~~~v~~~~~~~s~~~~-~l~~~~---~d~~i~i~d~~  258 (327)
                      ..++.  +.++|+.+++ .... +... .+.+.....  ++++. ++++.+   .-+.+..+|+.
T Consensus       367 ~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~--~~~~~~~~~~~ss~~~P~~~~~~d~~  429 (711)
T 4hvt_A          367 YDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSS--YEEEEEALITIENSIVPPTIYLWVKT  429 (711)
T ss_dssp             EETTEEEEEEECEETTEECCCEEECCCSTTCEEEEEC--CTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred             EECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEee--cCcCCEEEEEEecCCCCCEEEEEeCC
Confidence            77764  5667766554 2222 2221 233444443  24544 444433   23678888876

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=84.89  E-value=13  Score=29.31  Aligned_cols=207  Identities=9%  Similarity=0.023  Sum_probs=103.7

Q ss_pred             CCCCeEEEec--CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC--------------CCEEEEEc
Q psy7482          64 PEGSHLISCS--DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD--------------KTLRTWNL  127 (327)
Q Consensus        64 ~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~  127 (327)
                      +++..|+...  .++.|...+.+... ...+ ....   +  --+++++.+|+-+...              ..|+..++
T Consensus        23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l-~~~~---~--~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~   95 (302)
T 3s25_A           23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKL-SNDT---A--MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR   95 (302)
T ss_dssp             EETTEEEEEEGGGTTEEEEEETTSCS-CEEE-EEEE---E--EEEEECSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred             EeCCEEEEEeCCCCceEEEEcCCCCC-CEEc-cCCc---e--eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence            3456555443  34556666654433 3333 1111   2  3457888888877643              35677777


Q ss_pred             CCCceeeeeeccccCccccceEEEEEccCCcEEEeec-----CCeEEEEEecCCceeeEecCCCceeEEEeecC--ceEE
Q psy7482         128 VKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE--TTVC  200 (327)
Q Consensus       128 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~--~~l~  200 (327)
                      ..++......          -....|+++++.++...     ...|+..++..........+..    ..++++  .+..
T Consensus        96 dg~~~~~l~~----------~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~  161 (302)
T 3s25_A           96 NGHGSTVLDP----------DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYY  161 (302)
T ss_dssp             TSCCCEEEEC----------SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEE
T ss_pred             CCCcceEeec----------CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEE
Confidence            6554322211          11236777887776553     3456666665433333333322    334555  4444


Q ss_pred             EeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCC--CeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482         201 TGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEE--SAITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       201 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      +......|...++..+.....+.   +... ..+.  |++++|+-...+  ..|..-++.... ...+..  ..+..++.
T Consensus       162 t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~--P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~~~~~~  232 (302)
T 3s25_A          162 NNPKNGQLYRYDTASQSEALFYD---CNCY-KPVV--LDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANIEHYNV  232 (302)
T ss_dssp             ECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEE--EETTEEEEEEGGGTTEEEEECSSSCC-CEECSC--SCEEEEEE
T ss_pred             EeCCCceEEEEECCCCCEEEEeC---CCcc-ceee--ecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCcceEEE
Confidence            55557788888887665433332   2222 2343  777777654433  356666765544 223321  23333333


Q ss_pred             eCcEEEEEec--CCcEEEEEccCc
Q psy7482         279 HRNHLICITS--AGDLVVWELNED  300 (327)
Q Consensus       279 ~~~~l~~~~~--dg~v~iw~~~~~  300 (327)
                      ...+|.-++.  .+.|..-+++..
T Consensus       233 ~g~~Iy~~~~~~~~~i~~~~~DG~  256 (302)
T 3s25_A          233 YGSLIFYQRGGDNPALCVVKNDGT  256 (302)
T ss_dssp             ETTEEEEEECSSSCEEEEEETTSC
T ss_pred             CCCEEEEEECCCCcEEEEEECCCC
Confidence            3355554432  233444444443

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=84.34  E-value=4.7  Score=35.18  Aligned_cols=60  Identities=18%  Similarity=0.185  Sum_probs=43.7

Q ss_pred             EEEEEECCCCCeEEEecCC------------CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEe
Q psy7482          57 ITCLKFTPEGSHLISCSDD------------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG  117 (327)
Q Consensus        57 v~~~~~~~~~~~l~~~~~d------------~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  117 (327)
                      .-.|+|+|.|++++.-..+            ..+.+.+..+++..+.+ ....+.+++.++|+||++.|++.-
T Consensus       478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~-~~P~gaE~TG~~fspDg~tlfvni  549 (592)
T 3zwu_A          478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSPDQKTLFVGI  549 (592)
T ss_dssp             EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECTTSSEEEEEE
T ss_pred             CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEE-eCCCCccCcCeeECCCCCEEEEEE
Confidence            4568999999866654322            23556666777776666 677777799999999998887653

>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}

Probab=82.96  E-value=19  Score=29.82  Aligned_cols=268  Identities=13%  Similarity=0.074  Sum_probs=134.0

Q ss_pred             EEEEeCCCEEEEecCCCeEEEEEcccc-cc-----------ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482          18 RSVAATSKLAASSGADETVVLYDMVKR-KQ-----------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus        18 ~~~~~~~~~l~~~~~dg~v~~w~~~~~-~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      ..++.....-+.-..||.|..|-.... ++           ...+. .-..|..++.-  +...+.-..||.|+.|-...
T Consensus        27 ~~ia~g~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~-~l~~v~~va~G--~~h~~~l~~~G~v~~wG~n~  103 (423)
T 3mvd_K           27 ARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVA-GIPDAVDISAG--GMHNLVLTKSGDIYSFGCND  103 (423)
T ss_dssp             --CCCCCCCCCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECC-SCSSEEEEEEC--SSEEEEEETTSCEEEEECCS
T ss_pred             eEEecCCccceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEcc-CCCCceEEeeC--CCeEEEEeCCCeEEEeECCC
Confidence            334443333344456888888853321 10           01111 11235555543  44556667789999996532


Q ss_pred             -CeE-----------EEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEc--C-CCcee------eeeeccccCcc
Q psy7482          86 -WQL-----------EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL--V-KGRSA------YITNLSSYGVG  144 (327)
Q Consensus        86 -~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~--~-~~~~~------~~~~~~~~~~~  144 (327)
                       +++           .... ...... |..++..  ....+.-..||.|..|-.  . .++.-      ...+....  .
T Consensus       104 ~GqLG~~~~~~~~~~~P~~-v~~~~~-i~~va~G--~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~--~  177 (423)
T 3mvd_K          104 EGALGRDTSEDGSESKPDL-IDLPGK-ALCISAG--DSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLM--E  177 (423)
T ss_dssp             SSTTCSCCCSTTSSSSCEE-CCCSSC-EEEEEEC--SSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESS--T
T ss_pred             CcCCCCCCcCCccccCCeE-EcCCCC-EEEEEcC--cCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEec--C
Confidence             110           0000 111122 5555543  345555678899999975  2 22210      00111100  1


Q ss_pred             ccceEEEEEccCCcEEEeecCCeEEEEEecCCc----------------------eeeEec--CCCceeEEEeecCceEE
Q psy7482         145 FENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG----------------------VLQTLK--SESKVHSVCFLNETTVC  200 (327)
Q Consensus       145 ~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~----------------------~~~~~~--~~~~i~~~~~~~~~~l~  200 (327)
                      ...|..++... ...++...+|.|+.|-.....                      ....+.  ....|..++......++
T Consensus       178 ~~~i~~va~G~-~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~  256 (423)
T 3mvd_K          178 GTVCCSIASGA-DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFM  256 (423)
T ss_dssp             TCCEEEEEECS-SEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecCC-CeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCCeEEeecCCccEEEEEECCcEEEE
Confidence            12366666543 234455568888888543211                      011111  23456666655444444


Q ss_pred             EeCCCCcEEEEEcCCCc-----------eeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC---------
Q psy7482         201 TGNEESAITAYNLTDGS-----------HLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG---------  260 (327)
Q Consensus       201 ~~~~d~~i~i~d~~~~~-----------~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~---------  260 (327)
                      .-..++.++.|-.....           ...........|..++.    ...+.+.-..||.|+.|-....         
T Consensus       257 ~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~----G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~  332 (423)
T 3mvd_K          257 RESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAG----GQHHTVILTTDLKCSVVGRPEYGRLGLGDVK  332 (423)
T ss_dssp             EETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEE----CSSEEEEEETTCCEEEEECCGGGTTCSSSCC
T ss_pred             EECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEc----ccCeEEEEeCCCcEEEEECCCCCCCCCCCcc
Confidence            44788999999654311           11111111335666664    3344455567899999964321         


Q ss_pred             ---ceeEEeecccCceEEEeeeCcEEEEEecCCcEEEEEccC
Q psy7482         261 ---SHLWHIKASASRIKGLASHRNHLICITSAGDLVVWELNE  299 (327)
Q Consensus       261 ---~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~  299 (327)
                         .....+......|..++......+....||.|+.|=...
T Consensus       333 ~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~  374 (423)
T 3mvd_K          333 DVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGV  374 (423)
T ss_dssp             SCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCT
T ss_pred             ccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCC
Confidence               112222222336777777775555568899999997655

>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}

Probab=80.02  E-value=11  Score=36.11  Aligned_cols=40  Identities=13%  Similarity=0.162  Sum_probs=33.5

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccc
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSS  140 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  140 (327)
                      +.+++..++..++++-+.|+++++|++.+++++....+..
T Consensus       240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~  279 (1139)
T 4fhn_B          240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ  279 (1139)
T ss_dssp             BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCC
T ss_pred             eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhh
Confidence            5566677788899999999999999999999888766544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	327
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	4e-16
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-15
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	5e-10
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	2e-08
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-15
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	3e-11
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	5e-10
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-12
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-10
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-07
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	5e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	1e-11
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-08
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-06
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-09
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	0.001
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	6e-10
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	8e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.002
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	7e-09
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	9e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	8e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	1e-04
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	7e-09
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-08
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-07
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-04
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-08
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	6e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	9e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	2e-07
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	2e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	4e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	0.004
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	6e-07
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	2e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	7e-07
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	2e-05
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.001
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	0.002
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-05
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.002
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	0.001
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.001
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.002

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 75.5 bits (184), Expect = 4e-16
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 25  KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84
           +L  S   D +  L+D+ +         HE  I  + F P G+   + SDD +  +F + 
Sbjct: 197 RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256

Query: 85  SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG 144
           + Q    +   +    +  +S   SG+L L+   D     W+ +K   A +       V 
Sbjct: 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV- 315

Query: 145 FENLDSVVWSPEGLLYA 161
                 +  + +G+  A
Sbjct: 316 ----SCLGVTDDGMAVA 328

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 73.6 bits (179), Expect = 2e-15
 Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 6/118 (5%)

Query: 13  HTASVRSVA--ATSKLAASSGADETVVL--YDMVKRKQSGALMQHEGTITCLKFTPEGSH 68
           H + + ++         A+   D T  L      +   + +       IT + F+  G  
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL 284

Query: 69  LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126
           L++  DD +  ++         +    H    V+ + +   G    +   D  L+ WN
Sbjct: 285 LLAGYDDFNCNVWDALKADRAGVLA-GHDN-RVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.8 bits (138), Expect = 5e-10
 Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 11  HSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH 68
            +    + SV+   + +L  +   D    ++D +K  ++G L  H+  ++CL  T +G  
Sbjct: 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA 326

Query: 69  LISCSDDGSIAIF 81
           + + S D  + I+
Sbjct: 327 VATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 52.4 bits (124), Expect = 2e-08
 Identities = 45/324 (13%), Positives = 91/324 (28%), Gaps = 50/324 (15%)

Query: 17  VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG 76
            R   A + L+  +   + V    M  R+    L  H   I  + +  +   L+S S DG
Sbjct: 21  ARKACADATLSQITNNIDPVGRIQMRTRRT---LRGHLAKIYAMHWGTDSRLLVSASQDG 77

Query: 77  SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136
            + I+   +           + + V   +  PSG      G D     +NL         
Sbjct: 78  KLIIWDSYTTNKVHAIP--LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV 135

Query: 137 NLSSYG-----------------------------------------VGFENLDSVVWSP 155
           +    G                                            + +   +   
Sbjct: 136 SRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195

Query: 156 EGLLYAIPIQNKAVVFSVEKAGVLQTLKS-ESKVHSVCFL-NETTVCTGNEESAITAYNL 213
             L  +      A ++ V +    QT    ES ++++CF  N     TG++++    ++L
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255

Query: 214 TDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRI 273
                L                       +  G ++     ++         +    +R+
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV 315

Query: 274 KGLASHRNHLICITSAGD--LVVW 295
             L    + +   T + D  L +W
Sbjct: 316 SCLGVTDDGMAVATGSWDSFLKIW 339

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.2 bits (178), Expect = 2e-15
 Identities = 20/121 (16%), Positives = 53/121 (43%), Gaps = 2/121 (1%)

Query: 5   TQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP 64
           + + ++ +  +  +          S   D+T+ ++D+        L+ H+  +  + F  
Sbjct: 198 SYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS 257

Query: 65  EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124
            G  ++SC+DD ++ ++   + +  K    AH+   V  +  H +    ++   D+T++ 
Sbjct: 258 GGKFILSCADDKTLRVWDYKNKRCMKTL-NAHEH-FVTSLDFHKTAPYVVTGSVDQTVKV 315

Query: 125 W 125
           W
Sbjct: 316 W 316

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.9 bits (146), Expect = 3e-11
 Identities = 52/318 (16%), Positives = 120/318 (37%), Gaps = 36/318 (11%)

Query: 6   QTFVTHSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFT 63
           + +    H + V  V       +  S+  D T+ ++D         L  H  ++  + F 
Sbjct: 9   EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 68

Query: 64  PEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR 123
             G  L SCS D +I ++    ++  +           + +SI P+G   +S  +DKT++
Sbjct: 69  HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNV--SSVSIMPNGDHIVSASRDKTIK 126

Query: 124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAV-VFSVEKAGVLQTL 182
            W +  G       + ++    E +  V  + +G L A    ++ V V+ V        L
Sbjct: 127 MWEVQTGY-----CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 181

Query: 183 KSESKVH-SVCFLNETT---------------------VCTGNEESAITAYNLTDGSHLW 220
           +    V   + +  E++                     + +G+ +  I  ++++ G  L 
Sbjct: 182 REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 241

Query: 221 QIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR 280
            +    + ++G++F        + +  ++  +  ++  +   +  + A    +  L  H+
Sbjct: 242 TLVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 299

Query: 281 NHLICITSAGD--LVVWE 296
                +T + D  + VWE
Sbjct: 300 TAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 57.4 bits (137), Expect = 5e-10
 Identities = 16/79 (20%), Positives = 33/79 (41%)

Query: 3   TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKF 62
               T V H +        +  K   S   D+T+ ++D   ++    L  HE  +T L F
Sbjct: 238 MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF 297

Query: 63  TPEGSHLISCSDDGSIAIF 81
                ++++ S D ++ ++
Sbjct: 298 HKTAPYVVTGSVDQTVKVW 316

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.7 bits (153), Expect = 5e-12
 Identities = 22/134 (16%), Positives = 42/134 (31%), Gaps = 20/134 (14%)

Query: 13  HTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALM------------QHEGTIT 58
           H  SV SV      +   S   D +V L+++                       H+  + 
Sbjct: 253 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVL 312

Query: 59  CLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT-----AVNHISIHPSGKLA 113
            +  T    +++S S D  +  +   S     + +  H+ +       N  S+ P   + 
Sbjct: 313 SVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ-GHRNSVISVAVANGSSLGPEYNVF 371

Query: 114 LSVGKDKTLRTWNL 127
            +   D   R W  
Sbjct: 372 ATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.9 bits (138), Expect = 5e-10
 Identities = 24/152 (15%), Positives = 49/152 (32%), Gaps = 18/152 (11%)

Query: 28  ASSGADETVVLYDMVKRKQSGALMQ-------HEGTITCLKFTPEGSHLISCSDDGSIAI 80
           A+   D  V ++D         L         H+ ++  + FT +G  ++S S D S+ +
Sbjct: 221 AAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 280

Query: 81  FRV----------GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
           + +                           V  ++   + +  LS  KD+ +  W+   G
Sbjct: 281 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 340

Query: 131 RSAYITNLSSYGV-GFENLDSVVWSPEGLLYA 161
               +       V      +     PE  ++A
Sbjct: 341 NPLLMLQGHRNSVISVAVANGSSLGPEYNVFA 372

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.2 bits (118), Expect = 1e-07
 Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 13/95 (13%)

Query: 5   TQTFVTHSHTASVRSVAAT--SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL-- 60
           T       H   V SVA T   +   S   D  V+ +D         L  H  ++  +  
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 358

Query: 61  ----KFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91
                  PE +   + S D    I     W+ +K+
Sbjct: 359 ANGSSLGPEYNVFATGSGDCKARI-----WKYKKI 388

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.1 bits (97), Expect = 5e-05
 Identities = 34/312 (10%), Positives = 100/312 (32%), Gaps = 44/312 (14%)

Query: 27  AASSGADETVVLYDMVKRKQSGA----LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82
           A     ++  +LY+    ++        + H   + C+KF+ +G +L +  +  +  ++R
Sbjct: 31  ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNK-TTQVYR 89

Query: 83  VGSWQLEKLFKKAHKGT----------------AVNHISIHPSGKLALSVGKDKTLRTWN 126
           V    L                            +  +   P GK   +  +D+ +R W+
Sbjct: 90  VSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWD 149

Query: 127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSES 186
           +   +   I       +   +                ++   +           +++   
Sbjct: 150 IENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT--LSIEDGV 207

Query: 187 KVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL------VFFSIPQE 240
              +V   +   +  G+ + A+  ++   G  + ++ +      G       V F+    
Sbjct: 208 TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT-RDG 266

Query: 241 TTVCTGNEESAITAYNLTDGS------------HLWHIKASASRIKGLASHRNHLICITS 288
            +V +G+ + ++  +NL + +                       +  +A+ +N    ++ 
Sbjct: 267 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSG 326

Query: 289 AGD--LVVWELN 298
           + D  ++ W+  
Sbjct: 327 SKDRGVLFWDKK 338

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.5 bits (150), Expect = 1e-11
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 3/78 (3%)

Query: 51  MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110
             HE  +  LKF   G   +S   D  +  +R        +F+      +V    I    
Sbjct: 262 HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS--IFQSKESS-SVLSCDISVDD 318

Query: 111 KLALSVGKDKTLRTWNLV 128
           K  ++   DK    + ++
Sbjct: 319 KYIVTGSGDKKATVYEVI 336

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (120), Expect = 6e-08
 Identities = 10/73 (13%), Positives = 24/73 (32%), Gaps = 1/73 (1%)

Query: 11  HSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
           H         A   K   S+G D  +  +       S    +   ++     + +  +++
Sbjct: 264 HESCVLSLKFAYCGKWFVSTGKDNLLNAWR-TPYGASIFQSKESSSVLSCDISVDDKYIV 322

Query: 71  SCSDDGSIAIFRV 83
           + S D    ++ V
Sbjct: 323 TGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (108), Expect = 2e-06
 Identities = 44/297 (14%), Positives = 96/297 (32%), Gaps = 17/297 (5%)

Query: 10  THSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQ-----HEGTITCLKF 62
           T +H   V +V     ++   + G    V ++D+        + Q      +  I   K 
Sbjct: 47  TLNHGEVVCAVTISNPTRHVYT-GGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL 105

Query: 63  TPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTL 122
            P+G  LI   +  +++I+ + +       +      A   ++I P  K    V      
Sbjct: 106 LPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK----VCFSCCS 161

Query: 123 RTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTL 182
                V             G         + +    L+   + N    + + +   LQ  
Sbjct: 162 DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH 221

Query: 183 KSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT 242
              S++ S+ +           ES+       +    +Q+    S +  L F        
Sbjct: 222 DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKF--AYCGKW 279

Query: 243 VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGD--LVVWEL 297
             +  +++ + A+    G+ ++  K S S +       +    +T +GD    V+E+
Sbjct: 280 FVSTGKDNLLNAWRTPYGASIFQSKES-SSVLSCDISVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (105), Expect = 6e-06
 Identities = 12/111 (10%), Positives = 37/111 (33%), Gaps = 6/111 (5%)

Query: 20  VAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIA 79
           V A  ++       + ++   + +  +    + H   +  +  +    H+ +    G + 
Sbjct: 17  VTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVK 75

Query: 80  IFRVGSWQ----LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126
           ++ +        + +L         +    + P G   +  G+  TL  W+
Sbjct: 76  VWDISHPGNKSPVSQLDCLNRDN-YIRSCKLLPDGCTLIVGGEASTLSIWD 125

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.9 bits (143), Expect = 1e-10
 Identities = 12/71 (16%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 57  ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK-KAHKGTAVNHISIHPSGKLALS 115
           I+C  +  + + +  C ++  + I+     +  ++ + K H G  V  +   P     ++
Sbjct: 10  ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG-QVTGVDWAPDSNRIVT 68

Query: 116 VGKDKTLRTWN 126
            G D+    W 
Sbjct: 69  CGTDRNAYVWT 79

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.9 bits (130), Expect = 5e-09
 Identities = 27/189 (14%), Positives = 56/189 (29%), Gaps = 5/189 (2%)

Query: 10  THS-HTASVRSVA--ATSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFTP 64
            HS     +   A        A    +  V +Y+    K  Q   L +H G +T + + P
Sbjct: 2   YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP 61

Query: 65  EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124
           + + +++C  D +  ++ +     +          A   +   P+ K        + +  
Sbjct: 62  DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121

Query: 125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKS 184
               +    ++       +    L         LL A     K  +FS     V +    
Sbjct: 122 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP 181

Query: 185 ESKVHSVCF 193
                 + F
Sbjct: 182 TPWGSKMPF 190

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 7/91 (7%)

Query: 7   TFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG 66
           +F          S    +        D+            +G    H+ +++ +     G
Sbjct: 279 SFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAA-AGAGLDSLHKNSVSQISVLSGG 337

Query: 67  ----SHLISCSDDGSIAIFRVGSWQLEKLFK 93
               S   +   DG ++I+ V S  LE   K
Sbjct: 338 KAKCSQFCTTGMDGGMSIWDVRS--LESALK 366

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.2 bits (136), Expect = 6e-10
 Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 2/121 (1%)

Query: 13  HTASVRS-VAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLIS 71
           H  SV + +        +   D+ + +YD + +K    L  H+G +  LK+   G  L+S
Sbjct: 11  HMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GGILVS 69

Query: 72  CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131
            S D ++ ++ +       +F+  +       I  + + K  ++  +D TL  W L K  
Sbjct: 70  GSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKES 129

Query: 132 S 132
           S
Sbjct: 130 S 130

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.4 bits (95), Expect = 8e-05
 Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 2/77 (2%)

Query: 51  MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110
             H   ++ +       +++    +    I+ + S +L            +  ++     
Sbjct: 278 SYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDAD-QIWSVNFKGKT 336

Query: 111 KLALSVGKDKTLRTWNL 127
            +A +V KD       L
Sbjct: 337 LVA-AVEKDGQSFLEIL 352

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (83), Expect = 0.002
 Identities = 10/71 (14%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 11  HSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPEGSHL 69
           H++ +++ +   +  +  S G++    +Y++   K   A +++    I  + F  +   +
Sbjct: 281 HTNLSAITTFYVSDNILVS-GSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LV 338

Query: 70  ISCSDDGSIAI 80
            +   DG   +
Sbjct: 339 AAVEKDGQSFL 349

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 54.1 bits (128), Expect = 7e-09
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 1/89 (1%)

Query: 39  YDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG 98
              V    S   + H G++  L ++P+G+ + S S D +I I+ V + ++EK        
Sbjct: 223 KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI-PVGTR 281

Query: 99  TAVNHISIHPSGKLALSVGKDKTLRTWNL 127
                + I  + +  +S+  +  +   N 
Sbjct: 282 IEDQQLGIIWTKQALVSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 47.6 bits (111), Expect = 9e-07
 Identities = 28/277 (10%), Positives = 69/277 (24%), Gaps = 9/277 (3%)

Query: 30  SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI-AIFRVGSWQL 88
                +V    +     +    +H    T  K +P G +  S    G++       +  +
Sbjct: 34  YCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI 93

Query: 89  EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENL 148
            K       G   +      S ++A      +      L    ++               
Sbjct: 94  LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVD 153

Query: 149 DSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAI 208
                    +  +             K        ++         + +   +   +  I
Sbjct: 154 FKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTI 213

Query: 209 TAYNLTDGSHLWQIKASASRIKGLVFF-----SIPQETTVCTGNEESAITAYNLTDGSHL 263
             YN  DG+     +  + +              P  T + + + +  I  +N+      
Sbjct: 214 VLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 273

Query: 264 WHIKAS---ASRIKGLASHRNHLICITSAGDLVVWEL 297
             I        +  G+   +  L+ I++ G +     
Sbjct: 274 KTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 44.5 bits (103), Expect = 8e-06
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 55  GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLAL 114
           GT   L  TP G  +  C+   S+    VGS    +++   H           PSG    
Sbjct: 18  GTAVVLGNTPAGDKIQYCNGT-SVYTVPVGSLTDTEIYT-EHSH-QTTVAKTSPSGYYCA 74

Query: 115 SVGKDKTLRTWN 126
           S      +R W+
Sbjct: 75  SGDVHGNVRIWD 86

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.7 bits (93), Expect = 1e-04
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 24  SKLAASSGADETVVLYDMVKRKQSGALMQHEG-TITCLKFTPEGSHLISCSDDGSIAIF 81
               AS+ AD+T+ ++++   K    +          L        L+S S +G I   
Sbjct: 250 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (128), Expect = 7e-09
 Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 3/152 (1%)

Query: 11  HSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
             HT  V S+        S   D ++ ++D+        L  H+   + ++     + L+
Sbjct: 174 QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--NILV 231

Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
           S + D ++ I+ + + Q  +  +  +K        +  +    ++   D T++ W+L  G
Sbjct: 232 SGNADSTVKIWDIKTGQCLQTLQGPNKHQ-SAVTCLQFNKNFVITSSDDGTVKLWDLKTG 290

Query: 131 RSAYITNLSSYGVGFENLDSVVWSPEGLLYAI 162
                      G     +  +  S   L+ A+
Sbjct: 291 EFIRNLVTLESGGSGGVVWRIRASNTKLVCAV 322

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (124), Expect = 2e-08
 Identities = 50/327 (15%), Positives = 110/327 (33%), Gaps = 21/327 (6%)

Query: 3   TLTQTFVTHSHTASVRSVAATS-KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLK 61
            L    V   H   V +          S   D T+ ++  V  K    L+ H G +   +
Sbjct: 5   ELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQ 64

Query: 62  FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121
                    S      +     G              + V  + +H    ++ S  +D T
Sbjct: 65  MRDNIIISGSTDRTLKVWNAETGECI----HTLYGHTSTVRCMHLHEKRVVSGS--RDAT 118

Query: 122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQT 181
           LR W++  G+  ++       V        V      + +        V+  E    L T
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAV------RCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 172

Query: 182 LKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET 241
           L+  +        +   V +G+ +++I  +++  G+ +  +    S   G+      ++ 
Sbjct: 173 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL----KDN 228

Query: 242 TVCTGNEESAITAYNLTDGSHLWHIKASA---SRIKGLASHRNHLICITSAGDLVVWELN 298
            + +GN +S +  +++  G  L  ++      S +  L  ++N +I  +  G + +W+L 
Sbjct: 229 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 288

Query: 299 E-DVTREPQRVSATNDGCRFTCLAIRP 324
             +  R    + +   G     +    
Sbjct: 289 TGEFIRNLVTLESGGSGGVVWRIRASN 315

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (113), Expect = 5e-07
 Identities = 17/127 (13%), Positives = 42/127 (33%), Gaps = 8/127 (6%)

Query: 9   VTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQ-SGALMQHEGTITCLKFTPEGS 67
               H +    +     +  S  AD TV ++D+   +        ++            +
Sbjct: 212 TLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN 271

Query: 68  HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT---AVNHISIHPSGKLALSVGKDKT--- 121
            +I+ SDDG++ ++ + + +  +       G     V  I    +  +     ++ T   
Sbjct: 272 FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEET 331

Query: 122 -LRTWNL 127
            L   + 
Sbjct: 332 KLLVLDF 338

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (90), Expect = 3e-04
 Identities = 12/85 (14%), Positives = 28/85 (32%), Gaps = 5/85 (5%)

Query: 2   YTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDM-----VKRKQSGALMQHEGT 56
             L      + H ++V  +        +S  D TV L+D+     ++   +       G 
Sbjct: 248 QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV 307

Query: 57  ITCLKFTPEGSHLISCSDDGSIAIF 81
           +  ++ +         S +G+    
Sbjct: 308 VWRIRASNTKLVCAVGSRNGTEETK 332

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 51.1 bits (120), Expect = 5e-08
 Identities = 27/246 (10%), Positives = 61/246 (24%), Gaps = 2/246 (0%)

Query: 53  HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKL 112
           H   IT L  + +G  L S   +G I  + + +    ++F   H    +  I     G L
Sbjct: 11  HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT-MITGIKTTSKGDL 69

Query: 113 ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFS 172
             +V  D  L+              +++         +V    +  + A           
Sbjct: 70  F-TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG 128

Query: 173 VEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGL 232
                 +    S   + +                   +             A  + +   
Sbjct: 129 KLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFS 188

Query: 233 VFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDL 292
              +    T         ++        ++ W    +       +     L   +    +
Sbjct: 189 NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV 248

Query: 293 VVWELN 298
           +VW +N
Sbjct: 249 IVWNMN 254

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 45.0 bits (104), Expect = 6e-06
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 51  MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK-LFKKAHKGTAVNHISIHPS 109
             H   + C+ ++P+   L + S D S+ ++ +        + K AH  ++VN +     
Sbjct: 221 TFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE 280

Query: 110 GKLALSVGKDKTLRTWNL 127
             +  S G+D  ++ WN+
Sbjct: 281 TTIV-SAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.1 bits (94), Expect = 9e-05
 Identities = 37/302 (12%), Positives = 86/302 (28%), Gaps = 14/302 (4%)

Query: 3   TLTQTFVTHSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITC 59
           ++ Q    + H  ++ +++  A  K   S+ A+  +  +D+     +      H   IT 
Sbjct: 3   SIDQVR--YGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITG 60

Query: 60  LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD 119
           +K T +   L + S D  + +   G   ++     A+K ++        +          
Sbjct: 61  IKTTSK-GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY 119

Query: 120 KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVL 179
           K +  ++             SY      L +             +    +  +       
Sbjct: 120 KHIAIYS----HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT 175

Query: 180 QTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQ 239
               +E    +        V T      I      +         +    K       P 
Sbjct: 176 IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD 235

Query: 240 ETTVCTGNEESAITAYNLTDGSHLWHIKASA---SRIKGLASHRNHLICITSA-GDLVVW 295
              + TG+ ++++  +N+   S    I   A   S +  +       I       ++  W
Sbjct: 236 NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295

Query: 296 EL 297
            +
Sbjct: 296 NV 297

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.8 bits (117), Expect = 1e-07
 Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 3/92 (3%)

Query: 38  LYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHK 97
            +     + +         +  ++F+P    L +   DG I+ + + + +  K F K ++
Sbjct: 235 RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE 294

Query: 98  GTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129
            + V    I  S  +      D T +T   + 
Sbjct: 295 DSVV---KIACSDNILCLATSDDTFKTNAAID 323

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.5 bits (116), Expect = 2e-07
 Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 53  HEGTITCLKFTPEGSHLISCSDDGSIAIFRV--GSWQLEKLFKKAHKGTAVNHISIHPSG 110
            +  I+ +K  P  S L+  S DGS+ +++    +  ++ L    +K   +   +   + 
Sbjct: 10  PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH-PLLCCNFIDNT 68

Query: 111 KLALSVG 117
            L + VG
Sbjct: 69  DLQIYVG 75

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.1 bits (102), Expect = 1e-05
 Identities = 8/72 (11%), Positives = 24/72 (33%), Gaps = 5/72 (6%)

Query: 9  VTHSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQ---HEGTITCLKFT 63
          +  +    +  +    +  L   +  D ++ +Y    + ++  L+Q   ++  + C  F 
Sbjct: 6  IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65

Query: 64 PEGSHLISCSDD 75
                I     
Sbjct: 66 DNTDLQIYVGTV 77

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (116), Expect = 2e-07
 Identities = 34/301 (11%), Positives = 94/301 (31%), Gaps = 14/301 (4%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
           +++L +       +  V  +    +   S   D T+ ++D    +    L  H G++ CL
Sbjct: 2   RHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120
           ++        S      +     G      +           +  +  +     S+    
Sbjct: 62  QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121

Query: 121 TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQ 180
                ++   R       +   V F++   V  S +  +          V++      ++
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK---------VWNTSTCEFVR 172

Query: 181 TLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKA-----SASRIKGLVFF 235
           TL    +  +     +  V +G+ ++ I  +++  G+ L  ++         R       
Sbjct: 173 TLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIV 232

Query: 236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRNHLICITSAGDLVVW 295
           S   +  +   +  +A+          L  +   + R+  L      ++  +    +++W
Sbjct: 233 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 292

Query: 296 E 296
           +
Sbjct: 293 D 293

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.4 bits (113), Expect = 4e-07
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 51  MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110
                     +   E   + + S D +I I+ V           AHK   VN++      
Sbjct: 212 SWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD-GVNNLLWETPS 270

Query: 111 KLALSVGKDKTLRTWNLV 128
            L  S G D  ++ WN+V
Sbjct: 271 TLV-SSGADACIKRWNVV 287

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.1 bits (81), Expect = 0.004
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 11/61 (18%)

Query: 53  HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKL 112
           H   IT L   P    LIS S DG I       W    +  + H    +  +    + + 
Sbjct: 12  HNKGITALTVNP----LISGSYDGRIME-----WSSSSMH-QDHSN-LIVSLDNSKAQEY 60

Query: 113 A 113
           +
Sbjct: 61  S 61

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 48.3 bits (113), Expect = 6e-07
 Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 4/90 (4%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL 60
            Y +     +     SV      +     +     ++ YD+  RK    + + +  +T L
Sbjct: 265 DYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNLTDL 320

Query: 61  KFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90
           + + +   ++   DDG I  F +   + E+
Sbjct: 321 RLSADRKTVMVRKDDGKIYTFPLEKPEDER 350

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 46.8 bits (109), Expect = 2e-06
 Identities = 10/120 (8%), Positives = 31/120 (25%), Gaps = 6/120 (5%)

Query: 11  HSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI 70
                   +  A            + +  D    +    L       +        ++  
Sbjct: 233 TKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQ 292

Query: 71  SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130
              + G +  + V + ++ ++         +  + +    K  +    D  + T+ L K 
Sbjct: 293 GAPEKGVLLKYDVKTRKVTEVKN------NLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 346

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.9 bits (112), Expect = 7e-07
 Identities = 19/138 (13%), Positives = 39/138 (28%), Gaps = 13/138 (9%)

Query: 1   KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ------HE 54
           K  +       +H A + SV+A +    S   D  + ++D           +      H+
Sbjct: 1   KVFIATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK 60

Query: 55  GTITCLKF-------TPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH 107
             +  +           E   + + S  G +  +R+      K           + +  H
Sbjct: 61  SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKH 120

Query: 108 PSGKLALSVGKDKTLRTW 125
               L      D+ L   
Sbjct: 121 SFWALKWGASNDRLLSHR 138

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.4 bits (100), Expect = 2e-05
 Identities = 15/119 (12%), Positives = 34/119 (28%), Gaps = 7/119 (5%)

Query: 55  GTITCLKFTPEGSHLISCS-DDGSIAIFRVGSWQLEKLFK-KAHKGTAVNHISIHP--SG 110
              T L + P  + +         +     G  ++  + +   H  + V  +   P    
Sbjct: 18  NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77

Query: 111 KLALSVGKDKTLRTWNLVKG---RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQN 166
           +   S  +   +  W         S  +   S + V    +  + W  EG    +  + 
Sbjct: 78  QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG 136

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.4 bits (100), Expect = 2e-05
 Identities = 9/78 (11%), Positives = 26/78 (33%), Gaps = 1/78 (1%)

Query: 51  MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110
            +            +     +   D +I ++ V + +  + +    +      + +  +G
Sbjct: 248 QEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATG 307

Query: 111 -KLALSVGKDKTLRTWNL 127
               +S+  D TL  + L
Sbjct: 308 NGRIISLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.0 bits (86), Expect = 0.001
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 24  SKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAI 80
           S+  A+ GAD T+ ++D+   K  Q   L + +     +     G   +IS S DG++  
Sbjct: 263 SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNF 322

Query: 81  FRV 83
           + +
Sbjct: 323 YEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 36/324 (11%), Positives = 83/324 (25%), Gaps = 27/324 (8%)

Query: 1   KYTLTQTF-----VTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALM---Q 52
             +L +          + T  +     T+ +A   G    V   D    K    +     
Sbjct: 2   SISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGH 61

Query: 53  HEGTITCLKFTPE--GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT------AVNHI 104
               +T +KF+P     +L S  + G + ++     +     +   K         ++ I
Sbjct: 62  GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121

Query: 105 SIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI 164
           S    G+    VG+ +      +       +  +S +             P   +     
Sbjct: 122 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181

Query: 165 QNKAVVFSVEKAGVLQTL------KSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSH 218
            +                           V       E  +  G++         +    
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 241

Query: 219 LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLA- 277
            +          G+   S        T   ++ I  +++T    +        ++     
Sbjct: 242 KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV 301

Query: 278 ----SHRNHLICITSAGDLVVWEL 297
               +    +I ++  G L  +EL
Sbjct: 302 GVVATGNGRIISLSLDGTLNFYEL 325

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 42.9 bits (99), Expect = 3e-05
 Identities = 19/111 (17%), Positives = 45/111 (40%), Gaps = 1/111 (0%)

Query: 68  HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWN 126
           ++++ +    + +       ++K+   A  G       + P G++A +   K ++L   +
Sbjct: 3   YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62

Query: 127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAG 177
           LV G +    +LS+     ++L     SP+G   AI      +  +  +  
Sbjct: 63  LVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 10/84 (11%), Positives = 27/84 (32%), Gaps = 1/84 (1%)

Query: 10  THSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL 69
                    S A       + GA   +  +D +++  S   +    +   +  + +GS +
Sbjct: 236 VRIMDVFYFSTAVNPAKTRAFGAYNVLESFD-LEKNASIKRVPLPHSYYSVNVSTDGSTV 294

Query: 70  ISCSDDGSIAIFRVGSWQLEKLFK 93
                 G +A +   + + +    
Sbjct: 295 WLGGALGDLAAYDAETLEKKGQVD 318

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.2 bits (88), Expect = 0.001
 Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 3/107 (2%)

Query: 56  TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALS 115
           T     +  E    ++  D G IA+    +++++ +      G AV+   +  SG+    
Sbjct: 22  TQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDT---GYAVHISRLSASGRYLFV 78

Query: 116 VGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI 162
           +G+D  +   +L       +  +           S +   E      
Sbjct: 79  IGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIA 125

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 14/123 (11%), Positives = 32/123 (26%), Gaps = 5/123 (4%)

Query: 10  THSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSH 68
             S   ++       +  A++      +  D+   K                  +P+  +
Sbjct: 206 EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN 265

Query: 69  LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128
            I    +  +A + +   +L K     H       ++    G      G    L  +N  
Sbjct: 266 QIYGVLN-RLAKYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGGTFNDLAVFNPD 321

Query: 129 KGR 131
              
Sbjct: 322 TLE 324

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 37.1 bits (84), Expect = 0.002
 Identities = 12/89 (13%), Positives = 29/89 (32%), Gaps = 3/89 (3%)

Query: 70  ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLV 128
           I+  +   I ++ +       L +       V  + + P  + L + V  +  +  + + 
Sbjct: 8   IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67

Query: 129 KGRSAYITNLSSYGVGFENLDSVVWSPEG 157
               A      S   G  +L  +    +G
Sbjct: 68  PDDGALTFAAESALPG--SLTHISTDHQG 94

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	327
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	100.0
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.97
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.97
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.96
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.96
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.96
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.95
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.95
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.95
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.94
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.92
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.92
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.91
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.9
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.88
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.85
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.85
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.79
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.76
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.72
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.71
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.68
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.63
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.56
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.5
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.48
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.44
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.43
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.4
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.4
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.35
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.34
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.33
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.31
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.3
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.3
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.29
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.26
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	99.2
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.16
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.98
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.95
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.91
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.82
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.67
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.58
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.57
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.46
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.43
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.42
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.4
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.38
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.31
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.26
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.12
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.11
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	98.07
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.04
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.88
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.86
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.78
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.75
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.54
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.19
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	97.06
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	96.47
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	95.76
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	95.74
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	95.72
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	95.68
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	95.58
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	95.19
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	95.1
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	94.75
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	93.76
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	92.7
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	92.28
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	90.22
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	88.28
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	83.52

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-47  Score=309.96  Aligned_cols=274  Identities=15%  Similarity=0.232  Sum_probs=241.4

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCCeEEEEEcccccccc-----ccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-----ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG   84 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~   84 (327)
                      +|...|.|++|  ++++||+|+ ||.|+|||+.++....     ...+|.+.|.+++|+|++++|++|+.||.|++||+.
T Consensus        49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~  127 (337)
T d1gxra_          49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA  127 (337)
T ss_dssp             CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred             CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccc
Confidence            79999999999  899999998 8999999998764332     234688999999999999999999999999999987


Q ss_pred             CC--eEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          85 SW--QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        85 ~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      ..  +....+ ..|... +..+.|+|++.++++++.|+.|++|++++++........     ...+.+++|++++..+++
T Consensus       128 ~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~-----~~~v~~l~~s~~~~~~~~  200 (337)
T d1gxra_         128 APTPRIKAEL-TSSAPA-CYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH-----TDGASCIDISNDGTKLWT  200 (337)
T ss_dssp             CC--EEEEEE-ECSSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-----SSCEEEEEECTTSSEEEE
T ss_pred             cccccccccc-cccccc-ccccccccccccccccccccccccccccccccccccccc-----cccccccccccccccccc
Confidence            54  344455 566666 999999999999999999999999999988765544322     345999999999999998


Q ss_pred             ec-CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482         163 PI-QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       163 ~~-~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      ++ |+.+++||+++++.+..+.+...|.+++|+|+ .++++++.|+.+++||++.++.. ....|...|++++|+  |++
T Consensus       201 ~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s--~~g  277 (337)
T d1gxra_         201 GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFA--YCG  277 (337)
T ss_dssp             EETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEEC--TTS
T ss_pred             ccccccccccccccceeecccccccceEEEEEcccccccceeccccccccccccccccc-cccccccccceEEEC--CCC
Confidence            87 99999999999999999999999999999998 78999999999999999888765 456789999999994  999


Q ss_pred             cEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482         241 TTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWEL  297 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~  297 (327)
                      ++|++++.||.|++||+.+++.+..+. |...|.+++|+|  ++|++|+.||.|+|||+
T Consensus       278 ~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         278 KWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             SEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred             CEEEEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence            999999999999999999999887765 678999999999  89999999999999997

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.9e-48  Score=310.42  Aligned_cols=281  Identities=18%  Similarity=0.333  Sum_probs=258.3

Q ss_pred             eeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcC
Q psy7482           7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG   84 (327)
Q Consensus         7 ~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~   84 (327)
                      .+.++||.++|++|+|  ++++||||+.||+|+|||+.+++.+.++.+|...|.+++|+|++.+++++..++.+.+|+..
T Consensus        10 ~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (317)
T d1vyhc1          10 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ   89 (317)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             cEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccc
Confidence            3456799999999999  89999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      ..+....+ ..+... +.++.|+++++.+++++.|+.+++||+++++....+..+.     ..+.+++|+|++.++++++
T Consensus        90 ~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~  162 (317)
T d1vyhc1          90 GFECIRTM-HGHDHN-VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR-----EWVRMVRPNQDGTLIASCS  162 (317)
T ss_dssp             SSCEEECC-CCCSSC-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS-----SCEEEEEECTTSSEEEEEE
T ss_pred             cccccccc-cccccc-ceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCC-----CcceeeecccCCCEEEEEe
Confidence            88887777 777777 9999999999999999999999999999988766654333     3489999999999999987


Q ss_pred             -CCeEEEEEecCCceeeEec-CCCceeEEEeecC---------------------ceEEEeCCCCcEEEEEcCCCceeEE
Q psy7482         165 -QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE---------------------TTVCTGNEESAITAYNLTDGSHLWQ  221 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~---------------------~~l~~~~~d~~i~i~d~~~~~~~~~  221 (327)
                       |+.+++|+..+++....+. +...+.+++++|+                     ..+++++.|+.|++||+++++++.+
T Consensus       163 ~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~  242 (317)
T d1vyhc1         163 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT  242 (317)
T ss_dssp             TTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred             CCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEE
Confidence             9999999999999888887 7788888888765                     2588899999999999999999999


Q ss_pred             eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         222 IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       222 ~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                      +.+|...|.+++++  |++++|++|+.||.|++||+.+++++..+.+|.++|++++|+|  ++|++|+.||+|+|||
T Consensus       243 ~~~~~~~v~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         243 LVGHDNWVRGVLFH--SGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EECCSSCEEEEEEC--SSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EeCCCCCEEEEEEC--CCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            99999999999995  8999999999999999999999999999999999999999999  8999999999999997

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.5e-45  Score=304.37  Aligned_cols=278  Identities=18%  Similarity=0.322  Sum_probs=238.2

Q ss_pred             ccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc------------------cccccEEEEEECCCCCeEE
Q psy7482          11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM------------------QHEGTITCLKFTPEGSHLI   70 (327)
Q Consensus        11 ~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~l~   70 (327)
                      .+|.+.|+||+|  +|++||+|+ |++|+|||+.+++.+..+.                  .|...|++++|+|++++|+
T Consensus        59 ~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~  137 (388)
T d1erja_          59 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA  137 (388)
T ss_dssp             EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred             CCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcce
Confidence            369999999999  899999987 8999999999887665443                  4667799999999999999


Q ss_pred             EecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEE
Q psy7482          71 SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDS  150 (327)
Q Consensus        71 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~  150 (327)
                      +|+.||.|++||...++....+ .+|... |.++.+++++..+++++.++.+++||.++............      ..+
T Consensus       138 s~~~dg~v~i~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~  209 (388)
T d1erja_         138 TGAEDRLIRIWDIENRKIVMIL-QGHEQD-IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG------VTT  209 (388)
T ss_dssp             EEETTSCEEEEETTTTEEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSC------EEE
T ss_pred             eccccccccccccccccccccc-cccccc-ccccccccccccccccccceeeeeeeccccccccccccccc------ccc
Confidence            9999999999999999998888 788887 99999999999999999999999999998776655544433      555


Q ss_pred             EEEcc-CCcEEEeec-CCeEEEEEecCCceeeEec--------CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce-
Q psy7482         151 VVWSP-EGLLYAIPI-QNKAVVFSVEKAGVLQTLK--------SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH-  218 (327)
Q Consensus       151 ~~~~~-~~~~l~~~~-~~~i~i~d~~~~~~~~~~~--------~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~-  218 (327)
                      +.+.+ +++++++++ |+.|++||.+++.....+.        |...|.+++|+|+ .++++++.|+.|++||+++++. 
T Consensus       210 ~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~  289 (388)
T d1erja_         210 VAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK  289 (388)
T ss_dssp             EEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred             ccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccc
Confidence            55555 778888887 9999999999988776653        5678999999998 8899999999999999976542 


Q ss_pred             -----------eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeee------C-
Q psy7482         219 -----------LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASH------R-  280 (327)
Q Consensus       219 -----------~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~------~-  280 (327)
                                 ......|...|.+++|+  |++++|++|+.||.|++||+.+++++.++.+|.+.|.++++.      | 
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd  367 (388)
T d1erja_         290 SDSKTPNSGTCEVTYIGHKDFVLSVATT--QNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE  367 (388)
T ss_dssp             ---------CEEEEEECCSSCEEEEEEC--GGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTT
T ss_pred             cccccccccceeeecccccceEEEEEEC--CCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCC
Confidence                       34456788899999994  899999999999999999999999999999999999999754      4 


Q ss_pred             -cEEEEEecCCcEEEEEccC
Q psy7482         281 -NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       281 -~~l~~~~~dg~v~iw~~~~  299 (327)
                       .+|++|+.||+|+||+++.
T Consensus       368 ~~~l~s~s~Dg~I~iW~~~k  387 (388)
T d1erja_         368 YNVFATGSGDCKARIWKYKK  387 (388)
T ss_dssp             CEEEEEEETTSEEEEEEEEE
T ss_pred             CCEEEEEeCCCEEEEEeeee
Confidence             7899999999999999853

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=4.9e-45  Score=294.15  Aligned_cols=276  Identities=16%  Similarity=0.189  Sum_probs=236.5

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE-
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE-   89 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~-   89 (327)
                      +.+.+..+++  +|+.||.++ ++.|.+||+.+++....+.+|...|++++|+|+|++|++|+.||+|++||+.+++.. 
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~   94 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL   94 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccc
Confidence            4445556666  888998875 667999999999999999999999999999999999999999999999999887643 


Q ss_pred             -EeEEecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcE-EEeec-
Q psy7482          90 -KLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLL-YAIPI-  164 (327)
Q Consensus        90 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~-  164 (327)
                       ..+ ..|... |.+++|+|++++|++++.  +..+++|++++++....+.     .|...|.+++|+|++++ +++|+ 
T Consensus        95 ~~~~-~~~~~~-v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~-----~h~~~v~~v~~~~~~~~~l~sgs~  167 (311)
T d1nr0a1          95 KTTI-PVFSGP-VKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT-----GQARAMNSVDFKPSRPFRIISGSD  167 (311)
T ss_dssp             EEEE-ECSSSC-EEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCC-----CCSSCEEEEEECSSSSCEEEEEET
T ss_pred             cccc-ccccCc-ccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccceeeeccccc
Confidence             334 667776 999999999999999886  4569999999887655432     23456999999999875 66666 


Q ss_pred             CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEee-------ecccceEEEEEE
Q psy7482         165 QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIK-------ASASRIKGLVFF  235 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~  235 (327)
                      |+.|++||+++++....+. |..+|.++.++|+ .++++++.|+.+++||.+++..+..++       +|...|++++|+
T Consensus       168 d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s  247 (311)
T d1nr0a1         168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS  247 (311)
T ss_dssp             TSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC
T ss_pred             ccccccccccccccccccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccC
Confidence            8999999999999888887 7899999999999 889999999999999999988776653       578899999994


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc---CceEEEeeeCcEEEEEecCCcEEEEEcc
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA---SRIKGLASHRNHLICITSAGDLVVWELN  298 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~v~~~~~~~~~l~~~~~dg~v~iw~~~  298 (327)
                        |++++|++|+.||.|++||+++++++.++..|.   ..+.++.|+++.|++++.||.|++||++
T Consensus       248 --~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         248 --PDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             --TTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred             --CCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence              999999999999999999999999999988764   3456777888999999999999999974

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.7e-44  Score=297.38  Aligned_cols=283  Identities=13%  Similarity=0.210  Sum_probs=230.2

Q ss_pred             CCccEEEEEe--CCCEEEEecCCCeEEEEEccccc--cccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      +.++|+|++|  ++++||+|+.||.|+|||..+++  .+..+.+|.++|++++|+|++++|++|+.|++|++||+.+++.
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~   85 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW   85 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc
Confidence            4578999999  89999999999999999997764  5677889999999999999999999999999999999988766


Q ss_pred             EEeEE-ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CC
Q psy7482          89 EKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QN  166 (327)
Q Consensus        89 ~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~  166 (327)
                      ...+. ..|... |.+++|+|+++.|++++.|+.+++|+++........... ...+...|.+++|+|++++|++++ |+
T Consensus        86 ~~~~~~~~~~~~-v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~p~~~~l~s~s~D~  163 (371)
T d1k8kc_          86 KPTLVILRINRA-ARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCDF  163 (371)
T ss_dssp             EEEEECCCCSSC-EEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE-CTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred             cccccccccccc-ccccccccccccceeecccCcceeeeeeccccccccccc-ccccccccccccccccccceeccccCc
Confidence            55442 345555 999999999999999999999999998876654333221 123345699999999999999987 99


Q ss_pred             eEEEEEecCCc------------------eeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecc
Q psy7482         167 KAVVFSVEKAG------------------VLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASA  226 (327)
Q Consensus       167 ~i~i~d~~~~~------------------~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  226 (327)
                      .+++||.....                  .+.... +...+.+++|+|+ .++++++.|+.|++||+.+++.+..+..|.
T Consensus       164 ~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~  243 (371)
T d1k8kc_         164 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET  243 (371)
T ss_dssp             CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred             EEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeeccc
Confidence            99999986532                  222333 6778999999998 889999999999999999999999999999


Q ss_pred             cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC--ceeE---------------------------------------E
Q psy7482         227 SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG--SHLW---------------------------------------H  265 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~--~~~~---------------------------------------~  265 (327)
                      .+|.+++|.  |++++|++|+ |+.+++|.....  ....                                       .
T Consensus       244 ~~v~s~~fs--~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (371)
T d1k8kc_         244 LPLLAVTFI--TESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL  320 (371)
T ss_dssp             CCEEEEEEE--ETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred             ccceeeeec--CCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEecccccccee
Confidence            999999996  7898888776 666666554322  1100                                       0


Q ss_pred             eecccCceEEEeeeC------cEEEEEecCCcEEEEEccCc
Q psy7482         266 IKASASRIKGLASHR------NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       266 ~~~~~~~v~~~~~~~------~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ...|.+.|+++++.+      ..|+|++.||.|++||++..
T Consensus       321 ~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~  361 (371)
T d1k8kc_         321 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL  361 (371)
T ss_dssp             SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred             cccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcC
Confidence            013778899999876      46999999999999999764

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.9e-43  Score=287.11  Aligned_cols=279  Identities=14%  Similarity=0.266  Sum_probs=240.8

Q ss_pred             eeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         8 ~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      ..++||.++|++++|  ++++||+|+.||+|+|||+.+++.+..+..|..+|.+++|+|+++++++|+.|+.+.+|+...
T Consensus        49 ~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~  128 (340)
T d1tbga_          49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKT  128 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSS
T ss_pred             EEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecccccc
Confidence            345699999999999  899999999999999999999999999999999999999999999999999999999999865


Q ss_pred             Ce----EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEE
Q psy7482          86 WQ----LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYA  161 (327)
Q Consensus        86 ~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  161 (327)
                      ..    ....+ .+|... ..... ...+..+.....+.....+...............     ..+....+.+.+.+++
T Consensus       129 ~~~~~~~~~~~-~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~  200 (340)
T d1tbga_         129 REGNVRVSREL-AGHTGY-LSCCR-FLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT-----GDVMSLSLAPDTRLFV  200 (340)
T ss_dssp             SCSCCCEEEEE-CCCSSC-EEEEE-EEETTEEEEEETTTEEEEEETTTTEEEEEEECCS-----SCEEEEEECTTSSEEE
T ss_pred             cccccccceec-cccccc-ccccc-cccccccccccccccccccccccccccccccccc-----eeEeeeccccccceeE
Confidence            43    33334 445544 44443 4445678888889999999887665544433332     2388899999999988


Q ss_pred             eec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEe--eecccceEEEEEEe
Q psy7482         162 IPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQI--KASASRIKGLVFFS  236 (327)
Q Consensus       162 ~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~  236 (327)
                      ++. |+.+++||+++++.+..+. |...|++++|+|+ .++++|+.|+.|++||++..+.+..+  ..+...+.+++|+ 
T Consensus       201 ~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-  279 (340)
T d1tbga_         201 SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS-  279 (340)
T ss_dssp             EEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC-
T ss_pred             EeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEEC-
Confidence            887 9999999999999999888 8899999999998 78999999999999999988877665  3456679999994 


Q ss_pred             cCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEE
Q psy7482         237 IPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWE  296 (327)
Q Consensus       237 s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~  296 (327)
                       |++++|++|+.||.|++||+.+++++..+.+|.++|++++|+|  .+|++|+.||.|+|||
T Consensus       280 -~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd  340 (340)
T d1tbga_         280 -KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN  340 (340)
T ss_dssp             -SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred             -CCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence             8999999999999999999999999999999999999999999  8999999999999997

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.6e-44  Score=293.81  Aligned_cols=310  Identities=15%  Similarity=0.223  Sum_probs=242.4

Q ss_pred             eeeeccCCccE-EEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           7 TFVTHSHTASV-RSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         7 ~~~~~~h~~~v-~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      ...++||...| +|+++++++||||+.||+|+|||+.+++++.++.+|.++|++++|+|+ .+|++|+.|+.|++|+...
T Consensus         5 ~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~   83 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKK   83 (355)
T ss_dssp             EEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTT
T ss_pred             cEEECCcCCCcEEEEEECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcCC-CEEEEEecccccccccccc
Confidence            34567998875 789999999999999999999999999999999999999999999985 5899999999999999999


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc--------Cccc--------cceE
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY--------GVGF--------ENLD  149 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--------~~~~--------~~v~  149 (327)
                      .+..................+.+++.++++++.|+.|++||+++............        ....        ....
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (355)
T d1nexb2          84 GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS  163 (355)
T ss_dssp             TEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSC
T ss_pred             cccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeecccc
Confidence            88777663333333355667788899999999999999999987654322111100        0000        0012


Q ss_pred             EEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecc
Q psy7482         150 SVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASA  226 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  226 (327)
                      ...+.+++++++.+. |+.+++||+++++.+.... +...+.++.++|+ ..+++++.|+.|++||++++..+..+.+|.
T Consensus       164 v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~  243 (355)
T d1nexb2         164 VRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHT  243 (355)
T ss_dssp             EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred             ccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecccccccccccccc
Confidence            234556778888876 9999999999999888877 7788999999998 889999999999999999999999999999


Q ss_pred             cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee-eC-cEEEEEecCCcEEEEEccCccCCC
Q psy7482         227 SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS-HR-NHLICITSAGDLVVWELNEDVTRE  304 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~-~~l~~~~~dg~v~iw~~~~~~~~~  304 (327)
                      ..|.++++    ++++|++++.||.|++||++++...  +..|...+.++.+ ++ ..+++++.||.|++||++++   +
T Consensus       244 ~~v~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg---~  314 (355)
T d1nexb2         244 ALVGLLRL----SDKFLVSAAADGSIRGWDANDYSRK--FSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSG---K  314 (355)
T ss_dssp             SCCCEEEE----CSSEEEEECTTSEEEEEETTTCCEE--EEEECTTCCCCCEEEECSSEEEEEETTEEEEEETTTC---C
T ss_pred             cccccccc----ccceeeeeeccccccccccccccee--cccccCCceEEEEEcCCCCEEEEEeCCEEEEEECCCC---C
Confidence            99999987    3579999999999999999887654  4456666666654 44 44555567999999999988   2


Q ss_pred             ceeeeecCCCCceEEEEeCCCC
Q psy7482         305 PQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       305 ~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ........|..+|++++|+|+.
T Consensus       315 ~~~~~~~~~~~~V~~v~~~~~~  336 (355)
T d1nexb2         315 LVHANILKDADQIWSVNFKGKT  336 (355)
T ss_dssp             BCCSCTTTTCSEEEEEEEETTE
T ss_pred             EEEEEecCCCCCEEEEEEcCCe
Confidence            2222234577899999999874

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=9.9e-43  Score=279.48  Aligned_cols=275  Identities=16%  Similarity=0.248  Sum_probs=222.3

Q ss_pred             eccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc-cccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC
Q psy7482          10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      ++||.+.|++++|  ++++||+|+.||+|++||+.+++....+. .|...|++++|+|++++ ++++.|+.+++|+....
T Consensus         8 ~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~~v~~~~~~~~   86 (299)
T d1nr0a2           8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL-FTVSWDDHLKVVPAGGS   86 (299)
T ss_dssp             ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE-EEEETTTEEEEECSSSS
T ss_pred             cCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeecccee-ecccceeeEEEeccCCc
Confidence            3499999999999  89999999999999999999998888775 68999999999999875 55667899999998654


Q ss_pred             eEE--EeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          87 QLE--KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        87 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                      ...  ......+... +.+++|+++++.+++++ ++.+.+|+....   .......      .+.+++|+|+++++++++
T Consensus        87 ~~~~~~~~~~~~~~~-~~~~~~s~~g~~~~~~~-~~~i~~~~~~~~---~~~~~~~------~~~~~~~s~~~~~l~~g~  155 (299)
T d1nr0a2          87 GVDSSKAVANKLSSQ-PLGLAVSADGDIAVAAC-YKHIAIYSHGKL---TEVPISY------NSSCVALSNDKQFVAVGG  155 (299)
T ss_dssp             SSCTTSCCEEECSSC-EEEEEECTTSSCEEEEE-SSEEEEEETTEE---EEEECSS------CEEEEEECTTSCEEEEEE
T ss_pred             ccccccccccccccc-ccccccccccccccccc-cccccccccccc---ccccccc------cccccccccccccccccc
Confidence            321  1121344555 89999999998777665 578999985432   1222222      278999999999999987


Q ss_pred             -CCeEEEEEecCCceee--EecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCcee---EEeeecccceEEEEEEec
Q psy7482         165 -QNKAVVFSVEKAGVLQ--TLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHL---WQIKASASRIKGLVFFSI  237 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~--~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~v~~~~~~~s  237 (327)
                       ++.+++||+++++...  ...|...|.+++|+|+ .++++++.|+.|++||+.++...   ..+..|..+|++++|+  
T Consensus       156 ~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--  233 (299)
T d1nr0a2         156 QDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWS--  233 (299)
T ss_dssp             TTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEEC--
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence             9999999998876544  3448899999999998 88999999999999999877654   3456789999999994  


Q ss_pred             CCCcEEEEecCCCeEEEEEcCCCcee--EEeec-ccCceEEEeeeC-cEEEEEecCCcEEEEEcc
Q psy7482         238 PQETTVCTGNEESAITAYNLTDGSHL--WHIKA-SASRIKGLASHR-NHLICITSAGDLVVWELN  298 (327)
Q Consensus       238 ~~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~-~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~  298 (327)
                      |++++|++|+.|+.|++||++++...  ..... +...+..+.|.+ ++|++++.||.|++||+.
T Consensus       234 ~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D~~i~iWdl~  298 (299)
T d1nr0a2         234 PDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP  298 (299)
T ss_dssp             TTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred             ccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCCEEEEEeCCCEEEEEecc
Confidence            99999999999999999999887633  23333 345678887777 899999999999999985

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-41  Score=275.62  Aligned_cols=265  Identities=14%  Similarity=0.229  Sum_probs=221.9

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEE---EeE-EecccCCceeeEEEecCCCEEEEEeCCCCE
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE---KLF-KKAHKGTAVNHISIHPSGKLALSVGKDKTL  122 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~---~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  122 (327)
                      +..+ .|...|++++|+|++++|++|+ ||.|+|||+.++...   ... ...|.+. |.+++|+|++++|++++.||.|
T Consensus        45 ~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~-I~~v~~s~dg~~l~s~~~dg~i  121 (337)
T d1gxra_          45 INTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNY-IRSCKLLPDGCTLIVGGEASTL  121 (337)
T ss_dssp             EEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSB-EEEEEECTTSSEEEEEESSSEE
T ss_pred             EEEC-CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCc-EEEEEEcCCCCEEEEeeccccc
Confidence            3444 6999999999999999999987 789999999765322   222 1356666 9999999999999999999999


Q ss_pred             EEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceE
Q psy7482         123 RTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTV  199 (327)
Q Consensus       123 ~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l  199 (327)
                      ++||+.............+   ...+..++|+|++.++++++ ++.+++||+++++...... +...+.+++|+++ ..+
T Consensus       122 ~iwd~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~  198 (337)
T d1gxra_         122 SIWDLAAPTPRIKAELTSS---APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKL  198 (337)
T ss_dssp             EEEECCCC--EEEEEEECS---SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             ccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999876554433333322   34589999999999999887 8999999999998887777 7889999999998 789


Q ss_pred             EEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeee
Q psy7482         200 CTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASH  279 (327)
Q Consensus       200 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  279 (327)
                      ++++.|+.+++||+++++.+..+. |...|.+++|.  |++++|++++.|+.+++||+++++.. ....|...|++++|+
T Consensus       199 ~~~~~d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s  274 (337)
T d1gxra_         199 WTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC--PTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFA  274 (337)
T ss_dssp             EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEEC
T ss_pred             ccccccccccccccccceeecccc-cccceEEEEEc--ccccccceeccccccccccccccccc-cccccccccceEEEC
Confidence            999999999999999998877664 78889999995  89999999999999999999888765 556789999999999


Q ss_pred             C--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         280 R--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       280 ~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      |  ++|++++.||.|++||+..+     ..+....+...|++++|+|+.
T Consensus       275 ~~g~~l~s~s~Dg~i~iwd~~~~-----~~~~~~~~~~~v~~~~~s~d~  318 (337)
T d1gxra_         275 YCGKWFVSTGKDNLLNAWRTPYG-----ASIFQSKESSSVLSCDISVDD  318 (337)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTC-----CEEEEEECSSCEEEEEECTTS
T ss_pred             CCCCEEEEEeCCCeEEEEECCCC-----CEEEEccCCCCEEEEEEeCCC
Confidence            9  89999999999999999887     333345577889999999973

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.8e-41  Score=270.24  Aligned_cols=277  Identities=17%  Similarity=0.255  Sum_probs=241.1

Q ss_pred             EEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEe
Q psy7482          38 LYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG  117 (327)
Q Consensus        38 ~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  117 (327)
                      .|.. ...+...+.+|.++|++++|+|++++|++|+.||+|++||+.+++.+..+ .+|... |.+++|+|++.+++++.
T Consensus         2 ~w~p-~~~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~-~~h~~~-V~~~~~~~~~~~~~~~~   78 (317)
T d1vyhc1           2 EWIP-RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTL-KGHTDS-VQDISFDHSGKLLASCS   78 (317)
T ss_dssp             CCCC-CSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEE-CCCSSC-EEEEEECTTSSEEEEEE
T ss_pred             ccCC-CCCccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEE-eCCCCc-EEEEeeecccccccccc
Confidence            4543 34556789999999999999999999999999999999999999999999 788887 99999999999999999


Q ss_pred             CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeec
Q psy7482         118 KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLN  195 (327)
Q Consensus       118 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~  195 (327)
                      .++.+..|+....+.......     +...+.++.++|++..+++++ |+.+++||+++++....+. +...+.+++++|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (317)
T d1vyhc1          79 ADMTIKLWDFQGFECIRTMHG-----HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ  153 (317)
T ss_dssp             TTSCCCEEETTSSCEEECCCC-----CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred             ccccccccccccccccccccc-----ccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeeccc
Confidence            999999999887765443322     234489999999999988887 9999999999999988887 788999999999


Q ss_pred             C-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEe------------------cCCCcEEEEecCCCeEEEEE
Q psy7482         196 E-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFS------------------IPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       196 ~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~------------------s~~~~~l~~~~~d~~i~i~d  256 (327)
                      + .++++++.|+.|++|++.+++.+..+..|...+..+.+.+                  ...+.++++++.|+.|++||
T Consensus       154 ~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~  233 (317)
T d1vyhc1         154 DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWD  233 (317)
T ss_dssp             TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEE
Confidence            8 8899999999999999999999999999999999998853                  12345789999999999999


Q ss_pred             cCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         257 LTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +.+++++..+.+|...|.+++|+|  ++|++++.||.|++||+.++.  ....+  ..|..+|++++|+|+.
T Consensus       234 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~--~~h~~~V~~~~~s~~~  301 (317)
T d1vyhc1         234 VSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR--CMKTL--NAHEHFVTSLDFHKTA  301 (317)
T ss_dssp             TTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC--CCEEE--ECCSSCEEEEEECSSS
T ss_pred             CCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCc--EEEEE--cCCCCCEEEEEEcCCC
Confidence            999999999999999999999999  899999999999999998872  23322  3467889999999973

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-39  Score=265.84  Aligned_cols=298  Identities=18%  Similarity=0.284  Sum_probs=239.3

Q ss_pred             eeccCCccE-EEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482           9 VTHSHTASV-RSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus         9 ~~~~h~~~v-~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      .++||.+.| .|++++|++||||+.||+|+|||+.+++++.++.+|...|.+++|+|+  +|++|+.|+.+++|+.....
T Consensus        11 ~l~GH~~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~   88 (342)
T d2ovrb2          11 VLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGE   88 (342)
T ss_dssp             EEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTE
T ss_pred             EECCcCCceEEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceeccccccccccccc
Confidence            345999987 467889999999999999999999999999999999999999999874  89999999999999998877


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-cCC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-IQN  166 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~  166 (327)
                      ..... ..+... +.....  ....+..+..|+.+.+|+..+++..........      ... ...+....++.+ .++
T Consensus        89 ~~~~~-~~~~~~-~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~d~  157 (342)
T d2ovrb2          89 CIHTL-YGHTST-VRCMHL--HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA------AVR-CVQYDGRRVVSGAYDF  157 (342)
T ss_dssp             EEEEE-CCCSSC-EEEEEE--ETTEEEEEETTSEEEEEESSSCCEEEEEECCSS------CEE-EEEECSSCEEEEETTS
T ss_pred             ceecc-ccccee-Eeeeec--ccccccccccceeEEEeecccccceeeeecccc------cce-eeccccceeeeecCCC
Confidence            66655 444433 554444  355788899999999999998877665544332      222 333444455555 499


Q ss_pred             eEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEE
Q psy7482         167 KAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCT  245 (327)
Q Consensus       167 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~  245 (327)
                      .+++||.+..+.+..+. +...+..+.+. ..++++++.||.|++||++.++.+..+..|...+.++.+    ++++|++
T Consensus       158 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~s  232 (342)
T d2ovrb2         158 MVKVWDPETETCLHTLQGHTNRVYSLQFD-GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL----KDNILVS  232 (342)
T ss_dssp             CEEEEEGGGTEEEEEECCCSSCEEEEEEC-SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE----ETTEEEE
T ss_pred             eEEEeecccceeeEEEcCcccccccccCC-CCEEEEEeCCCeEEEeecccceeeeEecccccceeEEec----CCCEEEE
Confidence            99999999998888877 55555555443 278999999999999999999999999999999988876    4579999


Q ss_pred             ecCCCeEEEEEcCCCceeEEeec---ccCceEEEeeeCcEEEEEecCCcEEEEEccCccCCCceeeee---cCCCCceEE
Q psy7482         246 GNEESAITAYNLTDGSHLWHIKA---SASRIKGLASHRNHLICITSAGDLVVWELNEDVTREPQRVSA---TNDGCRFTC  319 (327)
Q Consensus       246 ~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~---~~~~~~i~~  319 (327)
                      ++.|+.|++||+...+....+..   |...+.++.++++++++|+.||.|++||++++.  ..+.+..   ..+...|++
T Consensus       233 ~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~tg~--~i~~~~~~~~~~~~~~v~~  310 (342)
T d2ovrb2         233 GNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE--FIRNLVTLESGGSGGVVWR  310 (342)
T ss_dssp             EETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC--EEEEEEECTTGGGTCEEEE
T ss_pred             EcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCCEEEEEECCCCC--EEEEEecccCCCCCCCEEE
Confidence            99999999999999888777764   556788899999999999999999999999873  3333332   235678999


Q ss_pred             EEeCCCC
Q psy7482         320 LAIRPPV  326 (327)
Q Consensus       320 l~~~p~~  326 (327)
                      ++|+|+.
T Consensus       311 v~~s~~~  317 (342)
T d2ovrb2         311 IRASNTK  317 (342)
T ss_dssp             EEECSSE
T ss_pred             EEECCCC
Confidence            9999973

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-40  Score=262.09  Aligned_cols=279  Identities=13%  Similarity=0.278  Sum_probs=228.4

Q ss_pred             eEEEeeeeccCCccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482           3 TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      .+.+.-...+|...|+|++|++++||||+.||+|+|||+.+++++.++.+|.++|++++|  ++++|++|+.|+.|++|+
T Consensus         4 ~~~~i~~~~~~~~~V~c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~   81 (293)
T d1p22a2           4 SLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWD   81 (293)
T ss_dssp             CCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred             eEEEEeccCCCCCCEEEEEEcCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccceeecccccccccccc
Confidence            334444455799999999999999999999999999999999999999999999999987  578999999999999999


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      +..+...... ....   .....+.+....++++..++.+.+|+..+..........  ..+...+..+.+.+.  .+++
T Consensus        82 ~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~--~~~~  153 (293)
T d1p22a2          82 VNTGEMLNTL-IHHC---EAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVL--VGHRAAVNVVDFDDK--YIVS  153 (293)
T ss_dssp             SSSCCEEEEE-CCCC---SCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEE--CCCSSCEEEEEEETT--EEEE
T ss_pred             cccccccccc-cccc---cccccccccccceeecccccceeEeeccccccccccccc--cccccccccceeccc--cccc
Confidence            9988877665 3333   233445566778999999999999999876644332221  122334666666543  4444


Q ss_pred             e-cCCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCC
Q psy7482         163 P-IQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQE  240 (327)
Q Consensus       163 ~-~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~  240 (327)
                      + .|+.+++||.++++.+..+. +...+..+.+++ ..+++++.|+.|++||+++.+.+..+.+|...+....    +++
T Consensus       154 ~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~----~~~  228 (293)
T d1p22a2         154 ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR----FDN  228 (293)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEE----CCS
T ss_pred             ccCCCceeeecCCCCcEEEEEcccccccccccCCC-CeEEEecCCCEEEEEecccceeeeeecccceeeeecc----ccc
Confidence            4 49999999999999988887 667777777764 5899999999999999999999999988888776543    788


Q ss_pred             cEEEEecCCCeEEEEEcCC---------CceeEEeecccCceEEEeeeCcEEEEEecCCcEEEEE
Q psy7482         241 TTVCTGNEESAITAYNLTD---------GSHLWHIKASASRIKGLASHRNHLICITSAGDLVVWE  296 (327)
Q Consensus       241 ~~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~v~iw~  296 (327)
                      .+|++++.||.|++||+..         ..++..+.+|.+.|++++|++.+|++++.||+|++||
T Consensus       229 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         229 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC
T ss_pred             eEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcCCEEEEEecCCEEEEeC
Confidence            9999999999999999753         3467888999999999999999999999999999997

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.1e-40  Score=264.23  Aligned_cols=264  Identities=15%  Similarity=0.234  Sum_probs=222.2

Q ss_pred             ccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCce
Q psy7482          53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS  132 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  132 (327)
                      +.+.+..++++|+|+.|+.+. ++.+.+||+.+++....+ .+|... |++++|+|++++|++|+.||.|++||+.+++.
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~-~~H~~~-v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~   92 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIY-TEHSHQ-TTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH   92 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEE-cCCCCC-EEEEEEeCCCCeEeccccCceEeeeeeecccc
Confidence            344567789999999999876 557999999999888888 888887 99999999999999999999999999998876


Q ss_pred             eeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCCceeeEec-CCCceeEEEeecC-c-eEEEeCCCC
Q psy7482         133 AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-T-TVCTGNEES  206 (327)
Q Consensus       133 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~-~l~~~~~d~  206 (327)
                      .....+..+   ..+|.+++|+|+++++++++   +..+++|+.++++....+. |...|.+++|+|+ . .+++|+.|+
T Consensus        93 ~~~~~~~~~---~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~  169 (311)
T d1nr0a1          93 ILKTTIPVF---SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDN  169 (311)
T ss_dssp             CEEEEEECS---SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTS
T ss_pred             ccccccccc---cCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeccccccc
Confidence            554444333   45699999999999888876   3568999999998888887 7889999999998 4 588899999


Q ss_pred             cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee-------cccCceEEEeee
Q psy7482         207 AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK-------ASASRIKGLASH  279 (327)
Q Consensus       207 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~  279 (327)
                      .|++||+++++....+..|..+|+++.++  |+++++++++.|+.|++||+.+++.+..+.       +|...|++++|+
T Consensus       170 ~i~i~d~~~~~~~~~~~~~~~~i~~v~~~--p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s  247 (311)
T d1nr0a1         170 TVAIFEGPPFKFKSTFGEHTKFVHSVRYN--PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS  247 (311)
T ss_dssp             CEEEEETTTBEEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC
T ss_pred             ccccccccccccccccccccccccccccC--ccccccccccccccccccccccccccccccccccccccccccccccccC
Confidence            99999999999999999999999999995  999999999999999999999988776654       578899999999


Q ss_pred             C--cEEEEEecCCcEEEEEccCccCCCceeeeecC-CCCceEEEEeCCCC
Q psy7482         280 R--NHLICITSAGDLVVWELNEDVTREPQRVSATN-DGCRFTCLAIRPPV  326 (327)
Q Consensus       280 ~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~i~~l~~~p~~  326 (327)
                      |  ++|++|+.||.|+|||++++.  ....+.... ....+.++.|+++.
T Consensus       248 ~~~~~l~tgs~Dg~v~iwd~~t~~--~~~~l~~~~~~~~~~~~~~~~~~~  295 (311)
T d1nr0a1         248 PDGTKIASASADKTIKIWNVATLK--VEKTIPVGTRIEDQQLGIIWTKQA  295 (311)
T ss_dssp             TTSSEEEEEETTSEEEEEETTTTE--EEEEEECCSSGGGCEEEEEECSSC
T ss_pred             CCCCEEEEEeCCCeEEEEECCCCc--EEEEEECCCCccceEEEEEecCCE
Confidence            9  999999999999999998872  222232221 12346677777764

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.8e-39  Score=259.27  Aligned_cols=272  Identities=14%  Similarity=0.194  Sum_probs=216.9

Q ss_pred             cccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEE
Q psy7482          44 RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR  123 (327)
Q Consensus        44 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  123 (327)
                      |+..+.+++|.++|++++|+|++++|++|+.||+|++||+++++....+...|... |.+++|+|+++ +++++.|+.++
T Consensus         2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~-v~~v~~~~~g~-~~~~~~d~~v~   79 (299)
T d1nr0a2           2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATM-ITGIKTTSKGD-LFTVSWDDHLK   79 (299)
T ss_dssp             TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSC-EEEEEECTTSC-EEEEETTTEEE
T ss_pred             CccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCc-EEEEEeeccce-eecccceeeEE
Confidence            45678899999999999999999999999999999999999999888885567766 99999999987 55667899999


Q ss_pred             EEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEe
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTG  202 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~  202 (327)
                      +|+............  ...+...+.+++|+|++++++++.++.+.+|+..   ..........+.+++|+|+ .+++++
T Consensus        80 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~s~~~~~l~~g  154 (299)
T d1nr0a2          80 VVPAGGSGVDSSKAV--ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG---KLTEVPISYNSSCVALSNDKQFVAVG  154 (299)
T ss_dssp             EECSSSSSSCTTSCC--EEECSSCEEEEEECTTSSCEEEEESSEEEEEETT---EEEEEECSSCEEEEEECTTSCEEEEE
T ss_pred             EeccCCccccccccc--cccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccc
Confidence            999865432111111  0112334889999999999999889999999843   2333445667889999999 789999


Q ss_pred             CCCCcEEEEEcCCCceeE-EeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee---EEeecccCceEEEee
Q psy7482         203 NEESAITAYNLTDGSHLW-QIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL---WHIKASASRIKGLAS  278 (327)
Q Consensus       203 ~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~v~~~~~  278 (327)
                      +.|+.+++||+++++... ....|..+|++++|+  |++++|++++.|+.|++||+.++..+   ..+.+|..+|++++|
T Consensus       155 ~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~  232 (299)
T d1nr0a2         155 GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFS--NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSW  232 (299)
T ss_dssp             ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEEC--TTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999998876543 345788999999995  89999999999999999999887654   455678999999999


Q ss_pred             eC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         279 HR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       279 ~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +|  ++|++|+.||.|++||+..... .+.......+...+.++.|.++
T Consensus       233 s~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~  280 (299)
T d1nr0a2         233 SPDNVRLATGSLDNSVIVWNMNKPSD-HPIIIKGAHAMSSVNSVIWLNE  280 (299)
T ss_dssp             CTTSSEEEEEETTSCEEEEETTCTTS-CCEEETTSSTTSCEEEEEEEET
T ss_pred             cccccceEEEcCCCEEEEEECCCCCc-ceEEEecCCCCCcEEEEEECCC
Confidence            99  8999999999999999988731 1222222334466888877654

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.5e-38  Score=261.22  Aligned_cols=285  Identities=14%  Similarity=0.267  Sum_probs=230.3

Q ss_pred             EEEecCCCeEEEEEccccccc----cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE---------
Q psy7482          27 AASSGADETVVLYDMVKRKQS----GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK---------   93 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~---------   93 (327)
                      .+.+..++...+|+....+..    ....+|.+.|++++|+|+|++|++|+ |+.|++||+.+++.+..+.         
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~  109 (388)
T d1erja_          31 ALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDP  109 (388)
T ss_dssp             TSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC--------
T ss_pred             ccccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccc
Confidence            346677889999997644322    23336999999999999999999987 8899999999988776652         


Q ss_pred             --------ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-
Q psy7482          94 --------KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-  164 (327)
Q Consensus        94 --------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  164 (327)
                              ..|... |.+++|+|++++|++|+.||.|++||...++.......     +...|.++.+++++..+++++ 
T Consensus       110 ~~~~~~~~~~~~~~-V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~~  183 (388)
T d1erja_         110 ENLNTSSSPSSDLY-IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-----HEQDIYSLDYFPSGDKLVSGSG  183 (388)
T ss_dssp             ---------CCCCB-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-----CSSCEEEEEECTTSSEEEEEET
T ss_pred             cccccccccCCCCC-EEEEEECCCCCcceeccccccccccccccccccccccc-----cccccccccccccccccccccc
Confidence                    123444 99999999999999999999999999998877655433     234599999999999888887 


Q ss_pred             CCeEEEEEecCCceeeEecCCCceeEEEeec-C-ceEEEeCCCCcEEEEEcCCCceeEEe-------eecccceEEEEEE
Q psy7482         165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLN-E-TTVCTGNEESAITAYNLTDGSHLWQI-------KASASRIKGLVFF  235 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~  235 (327)
                      ++.+++||.++........+.....++.+.+ + .++++++.|+.|++||.+++..+..+       .+|...|.+++|+
T Consensus       184 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s  263 (388)
T d1erja_         184 DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT  263 (388)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC
T ss_pred             ceeeeeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEEC
Confidence            8999999999998888888777777777776 4 78999999999999999988876654       3578899999995


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCc------------eeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGS------------HLWHIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~------------~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                        |++++|++++.|+.|++||+.++.            .......|...|.+++|+|  ++|++|+.||.|++||+.++.
T Consensus       264 --~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~  341 (388)
T d1erja_         264 --RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN  341 (388)
T ss_dssp             --TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC
T ss_pred             --CCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence              899999999999999999987654            3445567888999999999  899999999999999998872


Q ss_pred             CCCceeeeecCCCCceEEEEeCC
Q psy7482         302 TREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       302 ~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                        ...  ....|...|+++++.+
T Consensus       342 --~~~--~l~~H~~~V~~~~~~~  360 (388)
T d1erja_         342 --PLL--MLQGHRNSVISVAVAN  360 (388)
T ss_dssp             --EEE--EEECCSSCEEEEEECS
T ss_pred             --EEE--EEeCCCCCEEEEEEec
Confidence              222  2334778899998654

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-38  Score=257.95  Aligned_cols=290  Identities=15%  Similarity=0.158  Sum_probs=221.3

Q ss_pred             eeEEEeeeec--cCCccEEEEEe--CCCEEEEecCCC-eEEEEEcccc--ccccccccc-cccEEEEEECC--CCCeEEE
Q psy7482           2 YTLTQTFVTH--SHTASVRSVAA--TSKLAASSGADE-TVVLYDMVKR--KQSGALMQH-EGTITCLKFTP--EGSHLIS   71 (327)
Q Consensus         2 ~~~~~~~~~~--~h~~~v~~~~~--~~~~l~~~~~dg-~v~~w~~~~~--~~~~~~~~~-~~~v~~~~~~~--~~~~l~~   71 (327)
                      +.++..+...  .-...+++++|  +++.|+.++.+. .|+.|+....  .....+.+| ...|++++|+|  ++++|++
T Consensus         3 ~~l~~~~p~~p~t~~~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~las   82 (325)
T d1pgua1           3 ISLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCS   82 (325)
T ss_dssp             EEEEEEECCCCCCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEE
T ss_pred             cccccccCCcCCCCCCCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEE
Confidence            3455555321  12235677888  888888876443 3566765443  334566676 46799999998  5689999


Q ss_pred             ecCCCcEEEEEcCCCeEEEeE-------EecccCCceeeEEEecCCCEEEEEeC--CCCEEEEEcCCCceeeeeeccccC
Q psy7482          72 CSDDGSIAIFRVGSWQLEKLF-------KKAHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNLSSYG  142 (327)
Q Consensus        72 ~~~d~~i~iw~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~  142 (327)
                      |+.||+|++||+..++....+       ...+.+. |.+++|+++++++++++.  ++.+.+|+.++++.+..+..    
T Consensus        83 gs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~-v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----  157 (325)
T d1pgua1          83 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGP-ISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSG----  157 (325)
T ss_dssp             EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSC-EEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCS----
T ss_pred             EeCCCCEEEeeecCCcceeeeecccccccccccCc-EEEEEECCCCCccceeeccccceEEEEeecccccceeeee----
Confidence            999999999998654322111       1345555 999999999999888764  67899999998877655432    


Q ss_pred             ccccceEEEEEccCCcE-EEeec-CCeEEEEEecCCceeeEec----CCCceeEEEeecC--ceEEEeCCCCcEEEEEcC
Q psy7482         143 VGFENLDSVVWSPEGLL-YAIPI-QNKAVVFSVEKAGVLQTLK----SESKVHSVCFLNE--TTVCTGNEESAITAYNLT  214 (327)
Q Consensus       143 ~~~~~v~~~~~~~~~~~-l~~~~-~~~i~i~d~~~~~~~~~~~----~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~  214 (327)
                       |...+.+++|+|++.. +++++ |+.+++||....+....+.    +...|.+++|+|+  .++++++.|+.|++||++
T Consensus       158 -h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~  236 (325)
T d1pgua1         158 -HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK  236 (325)
T ss_dssp             -CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred             -cccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeec
Confidence             3455999999998865 45555 9999999998887766654    5677999999997  678899999999999999


Q ss_pred             CCceeEEeeecccceEEEEEEec-CCCcEEEEecCCCeEEEEEcCCCceeEEeecccCc--eE--EEeeeC-cEEEEEec
Q psy7482         215 DGSHLWQIKASASRIKGLVFFSI-PQETTVCTGNEESAITAYNLTDGSHLWHIKASASR--IK--GLASHR-NHLICITS  288 (327)
Q Consensus       215 ~~~~~~~~~~~~~~v~~~~~~~s-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~--v~--~~~~~~-~~l~~~~~  288 (327)
                      +++.+..+.+|..++..+.|... +++++|++++.|+.|+|||+++++++..+..|...  +.  ++.+.+ .+|++++.
T Consensus       237 ~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~  316 (325)
T d1pgua1         237 SGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL  316 (325)
T ss_dssp             TCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET
T ss_pred             cccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEEEC
Confidence            99999999988887765554321 78999999999999999999999999888766543  33  344444 78999999


Q ss_pred             CCcEEEEEc
Q psy7482         289 AGDLVVWEL  297 (327)
Q Consensus       289 dg~v~iw~~  297 (327)
                      ||.|++||+
T Consensus       317 dg~i~vwdl  325 (325)
T d1pgua1         317 DGTLNFYEL  325 (325)
T ss_dssp             TSCEEEEET
T ss_pred             CCEEEEEEC
Confidence            999999996

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.4e-38  Score=262.78  Aligned_cols=239  Identities=13%  Similarity=0.205  Sum_probs=203.0

Q ss_pred             cccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe--EEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCc
Q psy7482          54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR  131 (327)
Q Consensus        54 ~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  131 (327)
                      .++|+|++|+|++++||+|+.||.|++||..+++  ....+ .+|.+. |.+++|+|++++|++++.|+.|++||++++.
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l-~gH~~~-V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~   84 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHEL-KEHNGQ-VTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT   84 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEE-ECCSSC-EEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEe-cCCCCC-EEEEEECCCCCEEEEEECCCeEEEEeecccc
Confidence            4789999999999999999999999999998775  44555 788887 9999999999999999999999999998877


Q ss_pred             eeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEe----c-CCCceeEEEeecC-ceEEEeCC
Q psy7482         132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTL----K-SESKVHSVCFLNE-TTVCTGNE  204 (327)
Q Consensus       132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~----~-~~~~i~~~~~~~~-~~l~~~~~  204 (327)
                      .........+   ...+.+++|+|+++.+++++ ++.+++|++.........    . +...|.+++|+|+ .+|++|+.
T Consensus        85 ~~~~~~~~~~---~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~  161 (371)
T d1k8kc_          85 WKPTLVILRI---NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC  161 (371)
T ss_dssp             EEEEEECCCC---SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred             cccccccccc---cccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceecccc
Confidence            6555544433   45599999999999999987 899999998776543222    2 6788999999999 78999999


Q ss_pred             CCcEEEEEcCCC------------------ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEe
Q psy7482         205 ESAITAYNLTDG------------------SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHI  266 (327)
Q Consensus       205 d~~i~i~d~~~~------------------~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  266 (327)
                      |+.+++||....                  +.+.....|...+.+++|+  |++++|++++.|+.|++||+.+++.+..+
T Consensus       162 D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~g~~l~s~~~d~~i~iwd~~~~~~~~~~  239 (371)
T d1k8kc_         162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS--ANGSRVAWVSHDSTVCLADADKKMAVATL  239 (371)
T ss_dssp             TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC--SSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred             CcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEee--cccccccccccCCcceEEeeecccceeee
Confidence            999999998643                  2455667888999999995  89999999999999999999999999999


Q ss_pred             ecccCceEEEeeeC-cEEEEEecCCcEEEEEccC
Q psy7482         267 KASASRIKGLASHR-NHLICITSAGDLVVWELNE  299 (327)
Q Consensus       267 ~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~~  299 (327)
                      ..|..+|.+++|+| ..+++++.|+.+++|..+.
T Consensus       240 ~~~~~~v~s~~fs~d~~~la~g~d~~~~~~~~~~  273 (371)
T d1k8kc_         240 ASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS  273 (371)
T ss_dssp             ECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred             ecccccceeeeecCCCCEEEEEcCCceEEEEeeC
Confidence            99999999999999 5555566688888876654

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.4e-37  Score=253.23  Aligned_cols=273  Identities=15%  Similarity=0.226  Sum_probs=224.1

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEE
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT  124 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  124 (327)
                      +..+++++|.++|++++|+|++++|++|+.||+|++||+.+++.+..+ ..|... |.+++|+|+++++++++.|+.+.+
T Consensus        46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~-~~~~~~-v~~v~~~~~~~~l~~~~~d~~i~~  123 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI-PLRSSW-VMTCAYAPSGNYVACGGLDNICSI  123 (340)
T ss_dssp             CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE-ECSCSC-EEEEEECTTSSEEEEEETTCCEEE
T ss_pred             eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEE-eccccc-EEeeEeeccceeeeeecccceeec
Confidence            455678999999999999999999999999999999999999999998 778877 999999999999999999999999


Q ss_pred             EEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-CCCceeEEEeecC-ceEEEe
Q psy7482         125 WNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNE-TTVCTG  202 (327)
Q Consensus       125 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~-~~l~~~  202 (327)
                      |+............ ....+..........++........+.....++........... ....+....+.+. .+++++
T Consensus       124 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (340)
T d1tbga_         124 YNLKTREGNVRVSR-ELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG  202 (340)
T ss_dssp             EESSSSCSCCCEEE-EECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             ccccccccccccce-ecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEe
Confidence            99876543322111 11112222444445545545555558888888887766655555 6778888888887 889999


Q ss_pred             CCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEee--cccCceEEEeeeC
Q psy7482         203 NEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIK--ASASRIKGLASHR  280 (327)
Q Consensus       203 ~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~  280 (327)
                      +.|+.|++||+++++++..+.+|..+|++++|+  |++++|++|+.|+.|++||+.....+..+.  .+...|.+++|+|
T Consensus       203 ~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~--p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  280 (340)
T d1tbga_         203 ACDASAKLWDVREGMCRQTFTGHESDINAICFF--PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK  280 (340)
T ss_dssp             ETTTEEEEEETTTTEEEEEECCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECS
T ss_pred             ecCceEEEEECCCCcEEEEEeCCCCCeEEEEEC--CCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECC
Confidence            999999999999999999999999999999995  999999999999999999999988776654  5567899999999


Q ss_pred             --cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         281 --NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       281 --~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                        ++|++|+.||.|++||+..+.  ..  .....|..+|++++|+|+.
T Consensus       281 ~~~~l~~g~~dg~i~iwd~~~~~--~~--~~~~~H~~~V~~l~~s~d~  324 (340)
T d1tbga_         281 SGRLLLAGYDDFNCNVWDALKAD--RA--GVLAGHDNRVSCLGVTDDG  324 (340)
T ss_dssp             SSCEEEEEETTSCEEEEETTTCC--EE--EEECCCSSCEEEEEECTTS
T ss_pred             CCCEEEEEECCCEEEEEECCCCc--EE--EEEcCCCCCEEEEEEeCCC
Confidence              899999999999999998872  22  2223477899999999973

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.3e-38  Score=249.87  Aligned_cols=267  Identities=16%  Similarity=0.186  Sum_probs=216.8

Q ss_pred             eEEEeeeeccCCccEEEEEeCCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEE
Q psy7482           3 TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR   82 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~   82 (327)
                      ++.+++  +||.++|++++|+.  |+||+.||+|++||+.++.     .+|...|.+++++++ ..+++++.|+++++|+
T Consensus         4 ~~i~~l--~gH~~~I~~l~~s~--l~sgs~Dg~v~~Wd~~~~~-----~~h~~~V~~~~~~~~-~~~~s~s~D~~v~~w~   73 (287)
T d1pgua2           4 EVLKTI--SGHNKGITALTVNP--LISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKA-QEYSSISWDDTLKVNG   73 (287)
T ss_dssp             EEEEEE--CCCSSCEEEEETTT--TEEEETTSCEEETTTTEEE-----CCCCSCEEEEECCST-TCCEEEETTTEEEETT
T ss_pred             ceeEEE--CCCCCceEEEEECc--EEEEeCCCeEEEEECCCCC-----CCCCCCEEEEEecCC-CeEEEEeecccccccc
Confidence            455555  59999999999965  9999999999999987653     479999999999875 4678999999999998


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      +...+        .... +..+.+++++..++++ .++.+.+|+..+++..........        ..++++++..+++
T Consensus        74 ~~~~~--------~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~v  135 (287)
T d1pgua2          74 ITKHE--------FGSQ-PKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSVRLNSP--------GSAVSLSQNYVAV  135 (287)
T ss_dssp             EEEEE--------CSSC-EEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEEECSSC--------EEEEEECSSEEEE
T ss_pred             ccccc--------cccc-eeeeeeccCCceEEEe-ecccceeeeccceeeeeeccccce--------eeeeeccCcceee
Confidence            75321        2223 7788888887666654 566799999988887766654432        3456677777777


Q ss_pred             ec-C-CeEEEEEecCCceeeEec--CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeE-EeeecccceEEEEEEe
Q psy7482         163 PI-Q-NKAVVFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLW-QIKASASRIKGLVFFS  236 (327)
Q Consensus       163 ~~-~-~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~  236 (327)
                      +. + +.+++|++...+....+.  +...+++++|+|+ .+|++|+.||.|++||+.+++... .+..|..+|.+++|+|
T Consensus       136 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p  215 (287)
T d1pgua2         136 GLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKP  215 (287)
T ss_dssp             EETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECC
T ss_pred             eccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecc
Confidence            65 4 579999998777666655  6778999999999 789999999999999999887654 4678999999999963


Q ss_pred             --------cCCCcEEEEecCCCeEEEEEcCC-CceeEEeecccCceEEEeeeC-cEEEEEecCCcEEEEEc
Q psy7482         237 --------IPQETTVCTGNEESAITAYNLTD-GSHLWHIKASASRIKGLASHR-NHLICITSAGDLVVWEL  297 (327)
Q Consensus       237 --------s~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~  297 (327)
                              .+++.++++|+.|+.|++||+++ .+.+..+.+|...|++++|+| ..|++++.||.|++|++
T Consensus       216 ~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         216 AEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNV  286 (287)
T ss_dssp             CC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred             cccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCEEEEEECCCeEEEEEE
Confidence                    13567899999999999999977 456777889999999999999 78999999999999996

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=9.2e-37  Score=249.48  Aligned_cols=277  Identities=14%  Similarity=0.223  Sum_probs=219.6

Q ss_pred             eeccCCccEEEEEe-CCCEEEEecCCCeEEEEEcccccccccccc--ccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482           9 VTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQ--HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus         9 ~~~~h~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      .+++|.++|++++| .+++|++|+.|++|++|+....+.......  +........+.+++.++++++.|+.|++||+.+
T Consensus        48 ~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~  127 (355)
T d1nexb2          48 QLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK  127 (355)
T ss_dssp             EEECCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC
T ss_pred             EEECCCCCEEEEEEcCCCEEEEEecccccccccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccC
Confidence            44589999999999 778999999999999999988876655443  344456677888999999999999999999976


Q ss_pred             CeEEEeEE----------------------ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCc
Q psy7482          86 WQLEKLFK----------------------KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV  143 (327)
Q Consensus        86 ~~~~~~~~----------------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  143 (327)
                      ........                      ..|..   ....+.+++++++++..|+.+++||+++++.........   
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~---  201 (355)
T d1nexb2         128 ESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA---SVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT---  201 (355)
T ss_dssp             -----------CCCEEESCTTTCTTEEEEEECCSS---CEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS---
T ss_pred             Cceeccccccceeccceeccccccceeeeeeeccc---cccccccccceeeeecccceeeeeecccccceeeeeccc---
Confidence            55433221                      11111   223455678899999999999999999887765543332   


Q ss_pred             cccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEE
Q psy7482         144 GFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQ  221 (327)
Q Consensus       144 ~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~  221 (327)
                        ..+.++.++|++..+++++ |+.|++||.+++..+..+. |...|.++++++ +++++++.||.|++||+++...  .
T Consensus       202 --~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~--~  276 (355)
T d1nexb2         202 --DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSR--K  276 (355)
T ss_dssp             --SCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECS-SEEEEECTTSEEEEEETTTCCE--E
T ss_pred             --cccccccccccceeeecccccceEEeeecccccccccccccccccccccccc-ceeeeeecccccccccccccce--e
Confidence              3488999999999998887 9999999999999999888 888999999975 6899999999999999987754  4


Q ss_pred             eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE-EeecccCceEEEeeeC-cEEEEEecCCcEEEEEcc
Q psy7482         222 IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW-HIKASASRIKGLASHR-NHLICITSAGDLVVWELN  298 (327)
Q Consensus       222 ~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~-~~l~~~~~dg~v~iw~~~  298 (327)
                      +..|...+..+.+.+ +++.++++|+ |+.|++||+++++++. .+.+|.++|.+++|+| .++++++.||.++||.++
T Consensus       277 ~~~~~~~~~~~~~~~-~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~~~~~~~s~dg~~~l~~~d  353 (355)
T d1nexb2         277 FSYHHTNLSAITTFY-VSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEILD  353 (355)
T ss_dssp             EEEECTTCCCCCEEE-ECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETTEEEEEEESSSCEEEEEEE
T ss_pred             cccccCCceEEEEEc-CCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCCeEEEEEECCCcEEEEEEe
Confidence            556777777777663 7777777765 8999999999999875 5678999999999999 777788999997776543

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.4e-36  Score=249.72  Aligned_cols=276  Identities=16%  Similarity=0.187  Sum_probs=203.6

Q ss_pred             EEeeeeccCCccEEEEEeCCCEEEEecCCCeEEEEEcccccccc------ccccccccEEEE------EECC-CCCeEEE
Q psy7482           5 TQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSG------ALMQHEGTITCL------KFTP-EGSHLIS   71 (327)
Q Consensus         5 ~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~v~~w~~~~~~~~~------~~~~~~~~v~~~------~~~~-~~~~l~~   71 (327)
                      ...-..++|.+.|.++++.+++++|++.|++|+|||..+.+...      ....|...+..+      ...+ ++.++++
T Consensus         5 ~~~~~~~~H~~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s   84 (393)
T d1sq9a_           5 ATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT   84 (393)
T ss_dssp             EEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred             eeeecCCcccCccEEEEEeCCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEE
Confidence            34445579999999999988999999999999999977654221      112233333222      2222 2346789


Q ss_pred             ecCCCcEEEEEcCCCeEEEeEE---------ecccCCceeeEEEecC-----CCEEEEEeCCCCEEEEEcCCCce-----
Q psy7482          72 CSDDGSIAIFRVGSWQLEKLFK---------KAHKGTAVNHISIHPS-----GKLALSVGKDKTLRTWNLVKGRS-----  132 (327)
Q Consensus        72 ~~~d~~i~iw~~~~~~~~~~~~---------~~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~iwd~~~~~~-----  132 (327)
                      ++.||.|++|++........+.         ..+... +..++|.++     +.++++++.||.+++|++.....     
T Consensus        85 ~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~  163 (393)
T d1sq9a_          85 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHS-FWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL  163 (393)
T ss_dssp             EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSC-EEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred             EeCCCcEEEEEccCCCceeeeeccccceeeeccCCCc-eEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCccccee
Confidence            9999999999975432211110         112233 777888775     35789999999999999853211     


Q ss_pred             --------eeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-------CCCceeEEEeecC
Q psy7482         133 --------AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-------SESKVHSVCFLNE  196 (327)
Q Consensus       133 --------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-------~~~~i~~~~~~~~  196 (327)
                              ...........+...+.+++|+|++ ++++|+ |+.|++||+++++.+..+.       |..+|.+++|+|+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spd  242 (393)
T d1sq9a_         164 TLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ  242 (393)
T ss_dssp             TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred             eeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccc
Confidence                    0011111222233458899999998 677776 9999999999998876553       6789999999999


Q ss_pred             -ceEEEeCCCCc---EEEEEcCCCceeEEee-------------ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         197 -TTVCTGNEESA---ITAYNLTDGSHLWQIK-------------ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       197 -~~l~~~~~d~~---i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                       .+|++|+.|+.   |++||+++++.+..+.             +|...|++++|+  |++++|++++.|++|++||+++
T Consensus       243 g~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fs--pd~~~l~S~s~D~~v~vWd~~~  320 (393)
T d1sq9a_         243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN--DSGETLCSAGWDGKLRFWDVKT  320 (393)
T ss_dssp             TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEEC--SSSSEEEEEETTSEEEEEETTT
T ss_pred             cceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccC--CCCCeeEEECCCCEEEEEECCC
Confidence             88999988874   8999999988777663             799999999994  9999999999999999999999


Q ss_pred             CceeEEeecccCceE----EEeeeC--cEEE
Q psy7482         260 GSHLWHIKASASRIK----GLASHR--NHLI  284 (327)
Q Consensus       260 ~~~~~~~~~~~~~v~----~~~~~~--~~l~  284 (327)
                      ++++.++.+|.+.|.    .++|++  ..++
T Consensus       321 g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~  351 (393)
T d1sq9a_         321 KERITTLNMHCDDIEIEEDILAVDEHGDSLA  351 (393)
T ss_dssp             TEEEEEEECCGGGCSSGGGCCCBCTTSCBCS
T ss_pred             CCEEEEECCcCCcccCCccEEEECCCCCEEE
Confidence            999999999987775    356666  4444

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.8e-36  Score=245.07  Aligned_cols=293  Identities=9%  Similarity=0.069  Sum_probs=220.8

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccc---cccccccEEEEEECCC-CCeEEEecCCC
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGA---LMQHEGTITCLKFTPE-GSHLISCSDDG   76 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~d~   76 (327)
                      ++.+.  .++|++.|++|+|  ++++||+|+.||+|+|||+.++.....   ..+|..+|.+++|+|+ +.+|++|+.||
T Consensus         2 ~~v~~--~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~   79 (342)
T d1yfqa_           2 QIVQI--EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG   79 (342)
T ss_dssp             EEEEC--SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred             CeEEc--CCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEccccc
Confidence            34443  3589999999999  899999999999999999987654333   3369999999999986 45899999999


Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc-CccccceEEEEEcc
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY-GVGFENLDSVVWSP  155 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~  155 (327)
                      .|++|+.......... ..+.........+.++...+++++.++.+++||++.+........... ...........+.+
T Consensus        80 ~v~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (342)
T d1yfqa_          80 EILKVDLIGSPSFQAL-TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT  158 (342)
T ss_dssp             CEEEECSSSSSSEEEC-BSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred             ceeeeecccccccccc-cccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeec
Confidence            9999999887777666 344433255666677888999999999999999876544333222111 11122355667778


Q ss_pred             CCcEEEeec-CCeEEEEEecCCceeeEec----CCCceeEEEeecC--ceEEEeCCCCcEEEEEcCCCcee---------
Q psy7482         156 EGLLYAIPI-QNKAVVFSVEKAGVLQTLK----SESKVHSVCFLNE--TTVCTGNEESAITAYNLTDGSHL---------  219 (327)
Q Consensus       156 ~~~~l~~~~-~~~i~i~d~~~~~~~~~~~----~~~~i~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~---------  219 (327)
                      .+..++.++ |+.+++||+...+......    ....+.+..+.+.  ..+++++.||.+.+|+.......         
T Consensus       159 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~  238 (342)
T d1yfqa_         159 NSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF  238 (342)
T ss_dssp             CSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred             cCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeecccccee
Confidence            888888876 9999999998766443322    4455666666654  68899999999999998654211         


Q ss_pred             ------EEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeec-ccCceEEEeeeCcEEEEEecCCcE
Q psy7482         220 ------WQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKA-SASRIKGLASHRNHLICITSAGDL  292 (327)
Q Consensus       220 ------~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~dg~v  292 (327)
                            .....|...+.+++|+  |++++|++|+.||.|++||+++++.+..+.. |...+.+++++++++++++.|+.+
T Consensus       239 ~~~~~~~~~~~~~~~v~~l~~s--p~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a~sdd~~  316 (342)
T d1yfqa_         239 RCHRLNLKDTNLAYPVNSIEFS--PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTF  316 (342)
T ss_dssp             ECCCCCTTCCSSCCCEEEEEEC--TTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTHH
T ss_pred             eeeeeccCCCcccccceeEEec--CCccEEEEECCCCEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEEEcCCcE
Confidence                  1123466678999995  9999999999999999999999999988864 455566666666999999999999


Q ss_pred             EEEEccCc
Q psy7482         293 VVWELNED  300 (327)
Q Consensus       293 ~iw~~~~~  300 (327)
                      ++|.....
T Consensus       317 ~~~~~~~~  324 (342)
T d1yfqa_         317 KTNAAIDQ  324 (342)
T ss_dssp             HHCSSSCT
T ss_pred             EEeeeeCC
Confidence            88876544

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-35  Score=240.18  Aligned_cols=244  Identities=14%  Similarity=0.171  Sum_probs=195.5

Q ss_pred             eeccC-CccEEEEEe----CCCEEEEecCCCeEEEEEccccccccc--------cccccccEEEEEECCCCCeEEEecC-
Q psy7482           9 VTHSH-TASVRSVAA----TSKLAASSGADETVVLYDMVKRKQSGA--------LMQHEGTITCLKFTPEGSHLISCSD-   74 (327)
Q Consensus         9 ~~~~h-~~~v~~~~~----~~~~l~~~~~dg~v~~w~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~-   74 (327)
                      .+.+| ...|++++|    ++++||+|+.||+|+|||+..++....        +..|.++|.+++|++++++|++++. 
T Consensus        57 ~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~  136 (325)
T d1pgua1          57 QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG  136 (325)
T ss_dssp             EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred             EEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeecc
Confidence            44577 468999999    568999999999999999987655433        3457889999999999999887654 


Q ss_pred             -CCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCE-EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEE
Q psy7482          75 -DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVV  152 (327)
Q Consensus        75 -d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~  152 (327)
                       ++.+.+|+.++++.+..+ .+|... |.+++|+|++.+ +++++.|+.+++||+...+......  ....+...|.+++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~--~~~~~~~~v~~v~  212 (325)
T d1pgua1         137 RDNFGVFISWDSGNSLGEV-SGHSQR-INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR--THHKQGSFVRDVE  212 (325)
T ss_dssp             SSCSEEEEETTTCCEEEEC-CSCSSC-EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC--SSSCTTCCEEEEE
T ss_pred             ccceEEEEeecccccceee-eecccc-cccccccccccceEEEeecccccccccccccccceecc--cccCCCCccEEee
Confidence             678999999999998888 788887 999999998765 6789999999999998776554433  2334456699999


Q ss_pred             EccC-CcEEEeec-CCeEEEEEecCCceeeEec-CCCceeEEEee---cC-ceEEEeCCCCcEEEEEcCCCceeEEeeec
Q psy7482         153 WSPE-GLLYAIPI-QNKAVVFSVEKAGVLQTLK-SESKVHSVCFL---NE-TTVCTGNEESAITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       153 ~~~~-~~~l~~~~-~~~i~i~d~~~~~~~~~~~-~~~~i~~~~~~---~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  225 (327)
                      |+|+ +.++++++ |+.|++||+++++.+..+. |..++..+.|+   |+ .+|++++.|+.|++||+++++++..+..|
T Consensus       213 ~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~  292 (325)
T d1pgua1         213 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD  292 (325)
T ss_dssp             ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred             eccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEEec
Confidence            9997 57788776 9999999999999998887 55555444443   44 79999999999999999999998888766


Q ss_pred             ccc--eEEEEEEecCCCcEEEEecCCCeEEEEEc
Q psy7482         226 ASR--IKGLVFFSIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       226 ~~~--v~~~~~~~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      ...  +..+++.+ +.+.+|++++.||.|++||+
T Consensus       293 ~~~~~~~~~~~~~-~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         293 KQQLGNQQVGVVA-TGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             TTCGGGCEEEEEE-EETTEEEEEETTSCEEEEET
T ss_pred             CCcccCeEEEEEE-CCCCEEEEEECCCEEEEEEC
Confidence            543  44555543 44568899999999999996

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-34  Score=231.60  Aligned_cols=271  Identities=15%  Similarity=0.259  Sum_probs=218.5

Q ss_pred             EEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC
Q psy7482          39 YDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK  118 (327)
Q Consensus        39 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  118 (327)
                      |+..+.++...+++|.+.|.+ +++++|++|++|+.||+|++||+.+++++..+ .+|... |.+++|+|+  +|++++.
T Consensus         1 W~~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~-~~h~~~-V~~v~~~~~--~l~s~s~   75 (342)
T d2ovrb2           1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGG-VWSSQMRDN--IIISGST   75 (342)
T ss_dssp             HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEEC-CCCSSC-EEEEEEETT--EEEEEET
T ss_pred             CCCCCCCcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEE-eCCCCC-EEEEEeCCC--cccccee
Confidence            566667788889999999865 35667899999999999999999999999998 888887 999999864  8999999


Q ss_pred             CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecCCCceeEEEeecCce
Q psy7482         119 DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETT  198 (327)
Q Consensus       119 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~  198 (327)
                      |+.+++|+...............     .+...... .........++.+.+|+..+++....+................
T Consensus        76 D~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (342)
T d2ovrb2          76 DRTLKVWNAETGECIHTLYGHTS-----TVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR  149 (342)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSS-----CEEEEEEE-TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSC
T ss_pred             cccccccccccccceecccccce-----eEeeeecc-cccccccccceeEEEeecccccceeeeecccccceeeccccce
Confidence            99999999987765544333322     13333333 3333444459999999999998888877555554444444588


Q ss_pred             EEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEee
Q psy7482         199 VCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLAS  278 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  278 (327)
                      +++++.|+.+++||.+..+.+..+.+|...+..+.    +++.++++++.||.|++||++.++++..+.+|...+.++++
T Consensus       150 ~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~----~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~  225 (342)
T d2ovrb2         150 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ----FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL  225 (342)
T ss_dssp             EEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEE----ECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE
T ss_pred             eeeecCCCeEEEeecccceeeEEEcCccccccccc----CCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEec
Confidence            99999999999999999999999998887766655    57899999999999999999999999999999999999999


Q ss_pred             eCcEEEEEecCCcEEEEEccCccCCCceeeee-cCCCCceEEEEeCCCC
Q psy7482         279 HRNHLICITSAGDLVVWELNEDVTREPQRVSA-TNDGCRFTCLAIRPPV  326 (327)
Q Consensus       279 ~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~-~~~~~~i~~l~~~p~~  326 (327)
                      ++++|++++.||.|++||+....  ....+.. ..+...+.++.++|+.
T Consensus       226 ~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  272 (342)
T d2ovrb2         226 KDNILVSGNADSTVKIWDIKTGQ--CLQTLQGPNKHQSAVTCLQFNKNF  272 (342)
T ss_dssp             ETTEEEEEETTSCEEEEETTTCC--EEEEECSTTSCSSCEEEEEECSSE
T ss_pred             CCCEEEEEcCCCEEEEEeccccc--ccccccccceeeeceeecccCCCe
Confidence            99999999999999999998872  2233322 2356788899998875

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-33  Score=219.71  Aligned_cols=262  Identities=13%  Similarity=0.242  Sum_probs=208.1

Q ss_pred             ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEE
Q psy7482          47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN  126 (327)
Q Consensus        47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  126 (327)
                      +.....|...|+|++|  ++++|++|+.||+|++||+.+++++..+ .+|... |.+++|  ++++|++|+.||.|++|+
T Consensus         8 i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l-~~H~~~-V~~v~~--~~~~l~s~s~D~~i~~~~   81 (293)
T d1p22a2           8 IHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRIL-TGHTGS-VLCLQY--DERVIITGSSDSTVRVWD   81 (293)
T ss_dssp             EECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEE-CCCSSC-EEEEEC--CSSEEEEEETTSCEEEEE
T ss_pred             EeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEE-ecCCCC-Eeeeec--ccceeecccccccccccc
Confidence            3445568888998765  7899999999999999999999999999 889888 998876  578999999999999999


Q ss_pred             cCCCceeeeeeccccCccccceEEEEEccCCcEEEee-cCCeEEEEEecCCceeeEe---c-CCCceeEEEeecCceEEE
Q psy7482         127 LVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-IQNKAVVFSVEKAGVLQTL---K-SESKVHSVCFLNETTVCT  201 (327)
Q Consensus       127 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~i~i~d~~~~~~~~~~---~-~~~~i~~~~~~~~~~l~~  201 (327)
                      +..+...........      . ...+.+....++++ .++.+.+||..........   . +...+..+.+.+ ..+++
T Consensus        82 ~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~  153 (293)
T d1p22a2          82 VNTGEMLNTLIHHCE------A-VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD-KYIVS  153 (293)
T ss_dssp             SSSCCEEEEECCCCS------C-EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET-TEEEE
T ss_pred             ccccccccccccccc------c-cccccccccceeecccccceeEeeccccccccccccccccccccccceecc-ccccc
Confidence            998877655443332      2 23333444445544 5999999999876543322   2 667777777655 46778


Q ss_pred             eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeCc
Q psy7482         202 GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHRN  281 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~  281 (327)
                      ++.|+.+++||+++++.+..+.++...+..+.+    ++.++++++.|+.|++||+++.+.+....+|...+..+.+.+.
T Consensus       154 ~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~  229 (293)
T d1p22a2         154 ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY----RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK  229 (293)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEEEEEE----ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSS
T ss_pred             ccCCCceeeecCCCCcEEEEEcccccccccccC----CCCeEEEecCCCEEEEEecccceeeeeecccceeeeeccccce
Confidence            889999999999999999999999888888775    4678999999999999999999999999999999988877779


Q ss_pred             EEEEEecCCcEEEEEccCccCC----Ccee-eeecCCCCceEEEEeCCCC
Q psy7482         282 HLICITSAGDLVVWELNEDVTR----EPQR-VSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       282 ~l~~~~~dg~v~iw~~~~~~~~----~~~~-~~~~~~~~~i~~l~~~p~~  326 (327)
                      +|++++.||.|++||+......    .... .....|...|++++|+|.+
T Consensus       230 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~~  279 (293)
T d1p22a2         230 RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ  279 (293)
T ss_dssp             EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSC
T ss_pred             EEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcCCE
Confidence            9999999999999998764211    1111 2234577889999998865

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.5e-34  Score=228.83  Aligned_cols=253  Identities=16%  Similarity=0.215  Sum_probs=204.7

Q ss_pred             cccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEE
Q psy7482          44 RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR  123 (327)
Q Consensus        44 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  123 (327)
                      .++++++.+|..+|++++|+|    |++|+.||+|++||+.++.      ..|... |.++.+++++ .+++++.|++++
T Consensus         3 ~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~------~~h~~~-V~~~~~~~~~-~~~s~s~D~~v~   70 (287)
T d1pgua2           3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH------QDHSNL-IVSLDNSKAQ-EYSSISWDDTLK   70 (287)
T ss_dssp             EEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE------CCCCSC-EEEEECCSTT-CCEEEETTTEEE
T ss_pred             cceeEEECCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC------CCCCCC-EEEEEecCCC-eEEEEeeccccc
Confidence            567889999999999999987    9999999999999987532      567777 9999998754 688999999999


Q ss_pred             EEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeC
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGN  203 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~  203 (327)
                      +|++...+      ...      .+..+++++++..++.+.++.+.+|+..+++.+..+.......++.... ..+++++
T Consensus        71 ~w~~~~~~------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~  137 (287)
T d1pgua2          71 VNGITKHE------FGS------QPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQ-NYVAVGL  137 (287)
T ss_dssp             ETTEEEEE------CSS------CEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECS-SEEEEEE
T ss_pred             cccccccc------ccc------ceeeeeeccCCceEEEeecccceeeeccceeeeeeccccceeeeeeccC-cceeeec
Confidence            99976432      222      2778899999999999889999999999999998888766665554433 4555555


Q ss_pred             C-CCcEEEEEcCCCceeEEee-ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeE-EeecccCceEEEeeeC
Q psy7482         204 E-ESAITAYNLTDGSHLWQIK-ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLW-HIKASASRIKGLASHR  280 (327)
Q Consensus       204 ~-d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~v~~~~~~~  280 (327)
                      . ++.+++|++...+....+. .|..++++++|+  |++.+|++|+.||.|++||+.+++... .+.+|..+|.+++|+|
T Consensus       138 ~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p  215 (287)
T d1pgua2         138 EEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS--PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKP  215 (287)
T ss_dssp             TTTSCEEEEETTEEEEEEECSSCCSSCEEEEEEC--TTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECC
T ss_pred             cccceeeeeeccccceeeeeeeccCCceeEEEec--cCccccccccccccccceeecccccccccccccccccceeeecc
Confidence            4 5679999998766655543 477889999994  999999999999999999999988654 4678999999999987


Q ss_pred             ------------cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         281 ------------NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       281 ------------~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                                  .+|++|+.|+.|++|+++.+.  . .......|...|++++|+|+.
T Consensus       216 ~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~--~-~~~~~~~h~~~V~~v~~~~~~  270 (287)
T d1pgua2         216 AEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM--K-IIKALNAHKDGVNNLLWETPS  270 (287)
T ss_dssp             CC------CCSCCEEEEEETTSCEEEEESSCTT--C-CEEETTSSTTCEEEEEEEETT
T ss_pred             cccccccccCCCCeeEeecCCCeEEEEECCCCC--e-EEEEeCCCCCCeEEEEECCCC
Confidence                        579999999999999997752  2 222234578899999999873

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.2e-32  Score=221.90  Aligned_cols=270  Identities=10%  Similarity=0.030  Sum_probs=194.2

Q ss_pred             ccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE--EecccCCceeeEEEecC-CCEEEEEeCCCC
Q psy7482          45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF--KKAHKGTAVNHISIHPS-GKLALSVGKDKT  121 (327)
Q Consensus        45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~  121 (327)
                      +.++..++|++.|++|+|+|++++|++|+.||+|++||++.+.....+  ...|... |.+++|+|+ +.+|++|+.||.
T Consensus         2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~-V~~v~f~~~~~~~l~sg~~d~~   80 (342)
T d1yfqa_           2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHP-LLCCNFIDNTDLQIYVGTVQGE   80 (342)
T ss_dssp             EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSC-EEEEEEEESSSEEEEEEETTSC
T ss_pred             CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCC-EEEEEEeCCCCCEEEEcccccc
Confidence            456677899999999999999999999999999999999765433222  1357766 999999986 458999999999


Q ss_pred             EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-------CCCceeEEEe
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-------SESKVHSVCF  193 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-------~~~~i~~~~~  193 (327)
                      |++|++..+...........    .......+.++...+++++ ++.+++||++.+.......       .........+
T Consensus        81 v~~w~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (342)
T d1yfqa_          81 ILKVDLIGSPSFQALTNNEA----NLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTM  156 (342)
T ss_dssp             EEEECSSSSSSEEECBSCCC----CSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEE
T ss_pred             eeeeeccccccccccccccc----ccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeee
Confidence            99999988766554433322    1234555566666776665 9999999987654333222       1233445566


Q ss_pred             ecC-ceEEEeCCCCcEEEEEcCCCceeEE---eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee------
Q psy7482         194 LNE-TTVCTGNEESAITAYNLTDGSHLWQ---IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL------  263 (327)
Q Consensus       194 ~~~-~~l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~------  263 (327)
                      .++ ..+++++.|+.|++||++..+....   ...+........+.+ .++..+++++.||.+.+|+.......      
T Consensus       157 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~  235 (342)
T d1yfqa_         157 DTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLP-KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR  235 (342)
T ss_dssp             EECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECS-GGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred             eccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeec-CCCCEEEeecCCCeEEEEEecCCcceeecccc
Confidence            666 7899999999999999987664333   233444566666653 67889999999999999997654311      


Q ss_pred             E---------EeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecC--CCCceEEEEeCCC
Q psy7482         264 W---------HIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATN--DGCRFTCLAIRPP  325 (327)
Q Consensus       264 ~---------~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~--~~~~i~~l~~~p~  325 (327)
                      .         ....|...+++++|+|  ++|++|+.||.|++||+.+.     +.+....  +...+.+++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~-----~~l~~~~~~~~~~~~~~s~~~~  305 (342)
T d1yfqa_         236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR-----KKIKNFAKFNEDSVVKIACSDN  305 (342)
T ss_dssp             EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT-----EEEEECCCCSSSEEEEEEECSS
T ss_pred             ceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCC-----cEEEEecCCCCCEEEEEEeCCC
Confidence            1         1234566799999999  99999999999999999987     3333332  3334555555443

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-32  Score=227.77  Aligned_cols=247  Identities=15%  Similarity=0.224  Sum_probs=183.1

Q ss_pred             cccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE------EEeEEecccCCceeeEEE---ec----CCCEEE
Q psy7482          48 GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL------EKLFKKAHKGTAVNHISI---HP----SGKLAL  114 (327)
Q Consensus        48 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~------~~~~~~~~~~~~v~~~~~---~~----~~~~l~  114 (327)
                      ...++|.+.|.++++++  ++|++++.|++|++||..+.+.      .... ..+... +..+..   .+    +..+++
T Consensus         8 ~~~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~   83 (393)
T d1sq9a_           8 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSH-FVHKSG-LHHVDVLQAIERDAFELCLVA   83 (393)
T ss_dssp             EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEE-ECCTTC-EEEEEEEEEEETTTEEEEEEE
T ss_pred             ecCCcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEee-eeccCC-ceEeeeEeeeccCCCCCcEEE
Confidence            34578999999999874  6899999999999999765431      1111 223322 322222   11    234678


Q ss_pred             EEeCCCCEEEEEcCCCceeeeee-----ccccCccccceEEEEEccCC-----cEEEeec-CCeEEEEEecCCc------
Q psy7482         115 SVGKDKTLRTWNLVKGRSAYITN-----LSSYGVGFENLDSVVWSPEG-----LLYAIPI-QNKAVVFSVEKAG------  177 (327)
Q Consensus       115 ~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~-----~~l~~~~-~~~i~i~d~~~~~------  177 (327)
                      +++.||.|++|++..........     ......+...+..++|.++.     .++++++ |+.+++|++....      
T Consensus        84 s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~  163 (393)
T d1sq9a_          84 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL  163 (393)
T ss_dssp             EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred             EEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCccccee
Confidence            89999999999986544322211     11112233447778887753     4666665 9999999985321      


Q ss_pred             ---------eeeEec----CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEe------eecccceEEEEEEecC
Q psy7482         178 ---------VLQTLK----SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQI------KASASRIKGLVFFSIP  238 (327)
Q Consensus       178 ---------~~~~~~----~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~------~~~~~~v~~~~~~~s~  238 (327)
                               ......    +...+.+++|+|++++++|+.|+.|++||+++++++..+      .+|..+|.+++|+  |
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~s--p  241 (393)
T d1sq9a_         164 TLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS--P  241 (393)
T ss_dssp             TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC--S
T ss_pred             eeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccc--c
Confidence                     011111    455689999999999999999999999999998876654      4688999999995  9


Q ss_pred             CCcEEEEecCCC---eEEEEEcCCCceeEEee-------------cccCceEEEeeeC--cEEEEEecCCcEEEEEccCc
Q psy7482         239 QETTVCTGNEES---AITAYNLTDGSHLWHIK-------------ASASRIKGLASHR--NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       239 ~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +|++|++|+.|+   .|++||+++++.+..+.             +|.+.|++++|+|  ++|++++.|++|++||+.++
T Consensus       242 dg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g  321 (393)
T d1sq9a_         242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK  321 (393)
T ss_dssp             STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred             ccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCC
Confidence            999999999886   49999999998877764             7999999999999  89999999999999999987

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=100.00  E-value=2.9e-31  Score=217.43  Aligned_cols=270  Identities=11%  Similarity=0.105  Sum_probs=207.9

Q ss_pred             EEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCC--cEEEEEcCCCeEEEeEE
Q psy7482          17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        17 v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~iw~~~~~~~~~~~~   93 (327)
                      ....++ ||+++|+++ +|.|++||+..+...+.  .|...|.+++|+|||++|++++.+.  .|++||.++++... + 
T Consensus         7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~~--~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~-~-   81 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-F-   81 (360)
T ss_dssp             EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC--SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-C-
T ss_pred             cccccCCCCCEEEEEE-CCeEEEEECCCCcEEEc--cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEE-e-
Confidence            456777 999999987 67999999988776653  5899999999999999998776553  79999999877654 3 


Q ss_pred             ecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---------
Q psy7482          94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---------  164 (327)
Q Consensus        94 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------  164 (327)
                      ..|... +.+++|+|++++|++++.++.+++|++.+++..........     .+.+++|+|+|++|+.+.         
T Consensus        82 ~~~~~~-v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~spdg~~la~~~~~~~~~~~~  155 (360)
T d1k32a3          82 EENLGN-VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA-----MITDFTISDNSRFIAYGFPLKHGETDG  155 (360)
T ss_dssp             CCCCCS-EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-----CCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred             eCCCce-EEeeeecccccccceeccccccccccccccceeeeeecccc-----cccchhhccceeeeeeeccccccceee
Confidence            567777 99999999999999999999999999999887666544433     378999999999988542         


Q ss_pred             --CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce-------eEEeee----------
Q psy7482         165 --QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH-------LWQIKA----------  224 (327)
Q Consensus       165 --~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~-------~~~~~~----------  224 (327)
                        ++.+++||..+++......+...+..++|+|+ ..|++++.++.+.+|+......       ...+..          
T Consensus       156 ~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (360)
T d1k32a3         156 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL  235 (360)
T ss_dssp             CCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGC
T ss_pred             ccccceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceE
Confidence              35689999999888777778888999999999 7899999999999998654321       111110          


Q ss_pred             --------------------------cccceEEEEEEe-----------cCCCcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482         225 --------------------------SASRIKGLVFFS-----------IPQETTVCTGNEESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       225 --------------------------~~~~v~~~~~~~-----------s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  267 (327)
                                                ..+....+...+           ++.+.++++++.++.|++||+.+++..    
T Consensus       236 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----  311 (360)
T d1k32a3         236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----  311 (360)
T ss_dssp             CCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----
T ss_pred             CCCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE----
Confidence                                      011112222210           011224456677889999999887643    


Q ss_pred             cccCceEEEeeeC--cEEEEEecCCcEEEEEccCcc
Q psy7482         268 ASASRIKGLASHR--NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       268 ~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      .|.+.|.+++|+|  ++|++++.||.|++||++.+.
T Consensus       312 ~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~  347 (360)
T d1k32a3         312 EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE  347 (360)
T ss_dssp             EEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTT
T ss_pred             EecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCC
Confidence            3445789999999  899999999999999999884

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.97  E-value=5.8e-27  Score=186.91  Aligned_cols=260  Identities=12%  Similarity=0.180  Sum_probs=208.5

Q ss_pred             EEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeEEEeEEecccCCceeeEE
Q psy7482          27 AASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHIS  105 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~  105 (327)
                      .++++.|++|.+||+.+++.+.++... ..+..++|+|||++|+ +++.++.|.+||+.+++.+..+ ..+. . +..+.
T Consensus         5 yV~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~-~~~~-~-~~~~~   80 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV-PAGS-S-PQGVA   80 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE-ECSS-S-EEEEE
T ss_pred             EEEECCCCEEEEEECCCCeEEEEEECC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeee-eccc-c-ccccc
Confidence            346778999999999999998888744 4578999999999874 6678899999999999998888 4443 3 78999


Q ss_pred             EecCCCEEEE-EeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEe
Q psy7482         106 IHPSGKLALS-VGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTL  182 (327)
Q Consensus       106 ~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~  182 (327)
                      |++++..+++ +..++.+.+|+..+++..........      ..++.++|++..++.+.  ++.+.+|+..+.+....+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (301)
T d1l0qa2          81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKS------PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV  154 (301)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSS------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             cccccccccccccccceeeecccccceeeeecccccc------ceEEEeecCCCeeeeeeccccceeeeeccccceeeec
Confidence            9999886655 45677899999998887776655544      78999999998776554  789999999999999999


Q ss_pred             cCCCceeEEEeecC-ceEEEeC-CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEec---CCCeEEEEEc
Q psy7482         183 KSESKVHSVCFLNE-TTVCTGN-EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGN---EESAITAYNL  257 (327)
Q Consensus       183 ~~~~~i~~~~~~~~-~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~---~d~~i~i~d~  257 (327)
                      .....+..+.++|+ ..++++. .++.+.+|+....+....+..+ .....+++.  +++..++.++   .++.|++||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~g~~~~v~~~~~~~~~v~v~D~  231 (301)
T d1l0qa2         155 SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE-AAPSGIAVN--PEGTKAYVTNVDKYFNTVSMIDT  231 (301)
T ss_dssp             ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SEEEEEEEC--TTSSEEEEEEECSSCCEEEEEET
T ss_pred             ccCCCceEEEeeccccceeeecccccccccccccceeeeeccccc-CCcceeecc--ccccccccccccceeeeeeeeec
Confidence            88888999999998 5555554 5567778887777666665544 446677884  8888776543   4578999999


Q ss_pred             CCCceeEEeecccCceEEEeeeC--cEE-EEEecCCcEEEEEccCc
Q psy7482         258 TDGSHLWHIKASASRIKGLASHR--NHL-ICITSAGDLVVWELNED  300 (327)
Q Consensus       258 ~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~~dg~v~iw~~~~~  300 (327)
                      .+++.+..+..+. .+.+++|+|  ++| ++++.|+.|++||+.++
T Consensus       232 ~t~~~~~~~~~~~-~~~~va~spdg~~l~va~~~~~~i~v~D~~t~  276 (301)
T d1l0qa2         232 GTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFCNTVSVIDTATN  276 (301)
T ss_dssp             TTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred             CCCeEEEEEcCCC-CEEEEEEeCCCCEEEEEECCCCeEEEEECCCC
Confidence            9999988887654 679999999  555 67788999999999888

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.97  E-value=1.4e-28  Score=201.40  Aligned_cols=247  Identities=10%  Similarity=0.111  Sum_probs=189.2

Q ss_pred             cCCccEEEEEe--CCCEEEEecCCC--eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCe
Q psy7482          12 SHTASVRSVAA--TSKLAASSGADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ   87 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~~dg--~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~   87 (327)
                      +|...|.+++|  ||++|++++.+.  .|++||..+++.. .+..|...|.+++|+|++++|++++.++.+++|+..+++
T Consensus        40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~  118 (360)
T d1k32a3          40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK  118 (360)
T ss_dssp             SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred             cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE-EeeCCCceEEeeeecccccccceeccccccccccccccc
Confidence            69999999999  999988776553  7999999877654 566799999999999999999999999999999999999


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeC----------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGK----------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      ....+ ..+... +.+++|+|+|++|+.+..          ++.+++||+.+++.........      .+..+.|+|+|
T Consensus       119 ~~~~~-~~~~~~-~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~------~~~~~~~spdg  190 (360)
T d1k32a3         119 PTVIE-RSREAM-ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENS------HDYAPAFDADS  190 (360)
T ss_dssp             EEEEE-ECSSSC-CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSS------BEEEEEECTTS
T ss_pred             eeeee-eccccc-ccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeeccccc------ccccccccCCC
Confidence            88877 667766 999999999999986543          4468999998876654433222      37889999999


Q ss_pred             cEEEeec-CCeEEEEEecCCce-------eeEe------------------------------------c-CCCceeEEE
Q psy7482         158 LLYAIPI-QNKAVVFSVEKAGV-------LQTL------------------------------------K-SESKVHSVC  192 (327)
Q Consensus       158 ~~l~~~~-~~~i~i~d~~~~~~-------~~~~------------------------------------~-~~~~i~~~~  192 (327)
                      +.|+.++ ++.+.+||......       ...+                                    . ..+....+.
T Consensus       191 ~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (360)
T d1k32a3         191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMII  270 (360)
T ss_dssp             CEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEE
T ss_pred             CEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEee
Confidence            9998887 78888888643221       0000                                    0 011122333


Q ss_pred             eecC--------------ceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         193 FLNE--------------TTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       193 ~~~~--------------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                      ..++              .+++.++.++.+++||+.+++.    ..|.+.+.+++|  +|||++|++++.||.|++||++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~~~~~v~~~~~--SpDG~~l~~~~~Dg~i~v~d~~  344 (360)
T d1k32a3         271 PLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV----TEVKNNLTDLRL--SADRKTVMVRKDDGKIYTFPLE  344 (360)
T ss_dssp             ECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE----EEEEEEEEEEEE--CTTSCEEEEEETTSCEEEEESS
T ss_pred             ecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeE----EEecCCcCEEEE--CCCCCEEEEEECCCeEEEEECC
Confidence            3322              1344566788999999987654    234556899999  5999999999999999999999


Q ss_pred             CCceeEEeecccCce
Q psy7482         259 DGSHLWHIKASASRI  273 (327)
Q Consensus       259 ~~~~~~~~~~~~~~v  273 (327)
                      +++...++..+..++
T Consensus       345 ~~~~~~~~~~d~~~~  359 (360)
T d1k32a3         345 KPEDERTVETDKRPL  359 (360)
T ss_dssp             CTTSCEECCCCSSCE
T ss_pred             CCCcceEEEeccccc
Confidence            999888877666554

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=7.5e-27  Score=195.62  Aligned_cols=296  Identities=9%  Similarity=0.054  Sum_probs=215.3

Q ss_pred             EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEE----ecccCCce
Q psy7482          26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK----KAHKGTAV  101 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~----~~~~~~~v  101 (327)
                      ++++.+.||+|+|||+.+++.+.++..|. .+..++|+|||++|++++.|++|++||+.+++......    .+|... +
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~-~  111 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSV-E  111 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEE-E
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcce-E
Confidence            56788899999999999999999998775 58999999999999999999999999999887544321    233444 6


Q ss_pred             eeEEEecCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccC------ccccceEEEEEccCCcEEEeec--CCeEEEEE
Q psy7482         102 NHISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYG------VGFENLDSVVWSPEGLLYAIPI--QNKAVVFS  172 (327)
Q Consensus       102 ~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d  172 (327)
                      .+++|+|||++++++ ..++.+.+||..+++...........      ........+.+++++..++...  .+.+.+++
T Consensus       112 ~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~  191 (426)
T d1hzua2         112 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN  191 (426)
T ss_dssp             ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred             EeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEE
Confidence            677788999987555 57899999999998876655433221      1122356678888888777664  56777777


Q ss_pred             ecCCce--eeEecCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeeecc--cceEEEEEEecCCCcEE--E
Q psy7482         173 VEKAGV--LQTLKSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKASA--SRIKGLVFFSIPQETTV--C  244 (327)
Q Consensus       173 ~~~~~~--~~~~~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~s~~~~~l--~  244 (327)
                      ......  +..+.+...+..+.++|+ +++ ++...+..+.+++..+++.+.......  .+.....+.. +....+  +
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  270 (426)
T d1hzua2         192 YKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVH-PKYGPVWST  270 (426)
T ss_dssp             CSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEE-TTTEEEEEE
T ss_pred             eccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeec-CCCCceEEe
Confidence            766553  334457788999999998 544 445577789999999998877664322  2233444432 333222  3


Q ss_pred             EecCCCeEEEEEcCC-------CceeEEeecccCceEEEeeeC--cEEE-------EEecCCcEEEEEccCccCCCceee
Q psy7482         245 TGNEESAITAYNLTD-------GSHLWHIKASASRIKGLASHR--NHLI-------CITSAGDLVVWELNEDVTREPQRV  308 (327)
Q Consensus       245 ~~~~d~~i~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~--~~l~-------~~~~dg~v~iw~~~~~~~~~~~~~  308 (327)
                      ..+.|+.+.+|+...       ++....+.+|...+..++|+|  ++|+       +++.|++|+|||+.+..  ....+
T Consensus       271 ~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~--~~~~~  348 (426)
T d1hzua2         271 SHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD--AKYQV  348 (426)
T ss_dssp             ECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTT--SCCEE
T ss_pred             ccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCC--cCeEE
Confidence            455688888888654       367888999999999999999  7777       35678999999998873  22222


Q ss_pred             e-------ecCCCCceEEEEeCCCC
Q psy7482         309 S-------ATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       309 ~-------~~~~~~~i~~l~~~p~~  326 (327)
                      .       ...+..++.+++|+||-
T Consensus       349 ~~~~~~~~~~~~~~rv~~~~fSpDG  373 (426)
T d1hzua2         349 LPIAEWADLGEGAKRVVQPEYNKRG  373 (426)
T ss_dssp             ECHHHHHCCCSSCCCEEEEEECSSS
T ss_pred             eccchhcccCCCCccEEEEEECCCC
Confidence            1       22456779999999973

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.96  E-value=3.7e-27  Score=190.96  Aligned_cols=263  Identities=9%  Similarity=0.069  Sum_probs=202.1

Q ss_pred             CEEEEecCCCeEEEEEcccccccccccc--ccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecccC---
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGALMQ--HEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKG---   98 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~---   98 (327)
                      +++++++.|++|++||+++++.+..+..  +...+.+++|+|||+++ ++++.++.|.+||+.+++.+..+ ..+..   
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~-~~~~~~~~   80 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI-DLSTPEER   80 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEE-ECCBTTEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEE-ecCCCccc
Confidence            5899999999999999999999888764  34567899999999987 46678999999999999998877 33321   


Q ss_pred             -CceeeEEEecCCCEEEEEeC------------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482          99 -TAVNHISIHPSGKLALSVGK------------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ  165 (327)
Q Consensus        99 -~~v~~~~~~~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  165 (327)
                       ..+..++|+|++++++++..            ++.+.+||..+++..........      +..++|+|+++++++++ 
T Consensus        81 ~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~-  153 (337)
T d1pbyb_          81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ------ITMLAWARDGSKLYGLG-  153 (337)
T ss_dssp             EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS------CCCEEECTTSSCEEEES-
T ss_pred             ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCC------ceEEEEcCCCCEEEEEc-
Confidence             12568999999999988763            56789999999888776665544      78899999999888875 


Q ss_pred             CeEEEEEecCCceeeEecCCCceeEEEeecC-------------------------ceEEEeCCCCcEEEEEcCCCceeE
Q psy7482         166 NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-------------------------TTVCTGNEESAITAYNLTDGSHLW  220 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-------------------------~~l~~~~~d~~i~i~d~~~~~~~~  220 (327)
                      +.+.+||..+++....+..........+.|+                         .....+..++.+.+|+..++....
T Consensus       154 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (337)
T d1pbyb_         154 RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM  233 (337)
T ss_dssp             SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred             CCcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEE
Confidence            4467899999888877753221111111111                         112223445568899998887644


Q ss_pred             E-eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEEEEc
Q psy7482         221 Q-IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVVWEL  297 (327)
Q Consensus       221 ~-~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~  297 (327)
                      . +..+...+..+.+  ++++.+++.+  ++.|++||+.+++.+..+. +...+.+++|+|  ++|++++.||.|++||.
T Consensus       234 ~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~  308 (337)
T d1pbyb_         234 REVRIMDVFYFSTAV--NPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDA  308 (337)
T ss_dssp             EEEEECSSCEEEEEE--CTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred             EEecCCCcceEEEEe--cccceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence            3 4556666777777  4888888776  5899999999999988876 456789999999  89999999999999999


Q ss_pred             cCc
Q psy7482         298 NED  300 (327)
Q Consensus       298 ~~~  300 (327)
                      .+.
T Consensus       309 ~t~  311 (337)
T d1pbyb_         309 ETL  311 (337)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            987

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.96  E-value=5e-27  Score=196.45  Aligned_cols=290  Identities=10%  Similarity=0.019  Sum_probs=198.7

Q ss_pred             EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE--EEeEE--ecccCCce
Q psy7482          26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL--EKLFK--KAHKGTAV  101 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~--~~~~~~~v  101 (327)
                      ++++.+.||+|.|||..+++.+..+..+. .+..++|+|||+++++++.|+.+.+||+.+++.  ...+.  ..+.+. +
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~-~  111 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSI-E  111 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEE-E
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCe-E
Confidence            46899999999999999999999998764 699999999999999999999999999987663  33332  233333 5


Q ss_pred             eeEEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccC------ccccceEEEEEccCCcEEEeec--CCeEEEEE
Q psy7482         102 NHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYG------VGFENLDSVVWSPEGLLYAIPI--QNKAVVFS  172 (327)
Q Consensus       102 ~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d  172 (327)
                      .+..|+|||++| +++..++.+++||..+++...........      ........+.++|++..++++.  ++.+.+||
T Consensus       112 ~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d  191 (432)
T d1qksa2         112 TSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD  191 (432)
T ss_dssp             ECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred             EecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEE
Confidence            666778899976 67778999999999999887766543221      1223467889999998776653  79999999


Q ss_pred             ecCCceee--EecCCCceeEEEeecC-ceEEE-eCCCCcEEEEEcCCCceeEEeee-----cccceEEEEEEecCCCcEE
Q psy7482         173 VEKAGVLQ--TLKSESKVHSVCFLNE-TTVCT-GNEESAITAYNLTDGSHLWQIKA-----SASRIKGLVFFSIPQETTV  243 (327)
Q Consensus       173 ~~~~~~~~--~~~~~~~i~~~~~~~~-~~l~~-~~~d~~i~i~d~~~~~~~~~~~~-----~~~~v~~~~~~~s~~~~~l  243 (327)
                      ..+.+...  .+.....+..++|+|+ .++++ +..++.+.++|..+++.+..+..     |........+  ...+...
T Consensus       192 ~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~g~~~  269 (432)
T d1qksa2         192 YTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVH--PTFGPVW  269 (432)
T ss_dssp             TTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEE--TTTEEEE
T ss_pred             ccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceec--CCCCcee
Confidence            98877544  4556778899999999 55544 45667899999988877655532     2222333333  1333333


Q ss_pred             EEec-CCCeEEEEEcCCCc-------eeEEeecc-------------------------cCceEEEee-eCcEEEEEecC
Q psy7482         244 CTGN-EESAITAYNLTDGS-------HLWHIKAS-------------------------ASRIKGLAS-HRNHLICITSA  289 (327)
Q Consensus       244 ~~~~-~d~~i~i~d~~~~~-------~~~~~~~~-------------------------~~~v~~~~~-~~~~l~~~~~d  289 (327)
                      ++.. .++.+.+|+.....       ....+..+                         .....++++ ..+.+++++.|
T Consensus       270 ~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~~la~~s~d  349 (432)
T d1qksa2         270 ATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSD  349 (432)
T ss_dssp             EEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSC
T ss_pred             cccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEEEechhhcccccC
Confidence            3332 36677777654321       12222211                         111122332 11778888888


Q ss_pred             CcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         290 GDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       290 g~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      +.+++|++.+.     ..+  ..+..++.+++|+||-
T Consensus       350 ~~~k~w~~~~~-----~~l--~~~~~~v~~~~fS~DG  379 (432)
T d1qksa2         350 PEFKTLPIAEW-----AGI--TEGQPRVVQGEFNKDG  379 (432)
T ss_dssp             CCEEEECHHHH-----HTC--CSSCCEEEEEEECTTS
T ss_pred             CceEecccccc-----ccc--CCCCCcEEEeEECCCC
Confidence            88999987655     112  2455678999999973

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=8.4e-26  Score=189.19  Aligned_cols=287  Identities=9%  Similarity=0.084  Sum_probs=201.2

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccccc-----cccccccEEEEEECCCCCeEEEe-cC
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGA-----LMQHEGTITCLKFTPEGSHLISC-SD   74 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~-~~   74 (327)
                      ++.+.+.  .| ..+..++|  ||++|++++.|++|++||+.+++....     ..+|...+.+++|+|||++++++ ..
T Consensus        53 ~~~~~l~--~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~  129 (426)
T d1hzua2          53 KIVKVID--TG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYW  129 (426)
T ss_dssp             SEEEEEE--CC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred             cEEEEEe--CC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEeecC
Confidence            4455555  44 45889999  999999999999999999998875432     33577778888999999987554 57


Q ss_pred             CCcEEEEEcCCCeEEEeEEecccCCceeeEEE-----------ecCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccC
Q psy7482          75 DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISI-----------HPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYG  142 (327)
Q Consensus        75 d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~-----------~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~  142 (327)
                      ++.+.+||..+++....+ ..+... +....+           ++++..++.... .+.+.+++..............  
T Consensus       130 ~~~v~i~d~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--  205 (426)
T d1hzua2         130 PPQFAIMDGETLEPKQIV-STRGMT-VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA--  205 (426)
T ss_dssp             SSEEEEEETTTCCEEEEE-ECCEEC-SSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEEC--
T ss_pred             CCeEEEEcCCccceeEEe-eccCCC-ccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEecc--
Confidence            899999999999888777 444433 444444           444444333322 2334444443333222211111  


Q ss_pred             ccccceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEec---CCCceeEEEeecC--c--eEEEeCCCCcEEEEEc
Q psy7482         143 VGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE--T--TVCTGNEESAITAYNL  213 (327)
Q Consensus       143 ~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~--~--~l~~~~~d~~i~i~d~  213 (327)
                        ...+..+.|+|+++++.++.  +..+.+++..+++......   .........+.+.  +  ..+..+.++.+.+|+.
T Consensus       206 --~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~  283 (426)
T d1hzua2         206 --APFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGT  283 (426)
T ss_dssp             --CSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEEC
T ss_pred             --CCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeec
Confidence              22388999999999888775  7789999999999887776   2222333333332  2  2334567888888886


Q ss_pred             CC-------CceeEEeeecccceEEEEEEecCCCcEEEE-------ecCCCeEEEEEcCCCceeEEee---------ccc
Q psy7482         214 TD-------GSHLWQIKASASRIKGLVFFSIPQETTVCT-------GNEESAITAYNLTDGSHLWHIK---------ASA  270 (327)
Q Consensus       214 ~~-------~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~-------~~~d~~i~i~d~~~~~~~~~~~---------~~~  270 (327)
                      ..       ++....+.+|...+..++|+  |++++|++       ++.|++|++||+.+++...++.         .|.
T Consensus       284 ~~~~~~~~~~~~~~~l~g~~~~v~~v~~s--Pdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~  361 (426)
T d1hzua2         284 DPKNHPQYAWKKVAELQGQGGGSLFIKTH--PKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA  361 (426)
T ss_dssp             CTTTCTTTBTSEEEEEECSSSCCCCEECC--TTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC
T ss_pred             cccccccccceEeEEEecCCCceeEEEcC--CCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCC
Confidence            54       36778899999999999994  99999995       4567899999999988765543         345


Q ss_pred             CceEEEeeeC--cEE-EEE----ecCCcEEEEEccCc
Q psy7482         271 SRIKGLASHR--NHL-ICI----TSAGDLVVWELNED  300 (327)
Q Consensus       271 ~~v~~~~~~~--~~l-~~~----~~dg~v~iw~~~~~  300 (327)
                      ..+..++|+|  +++ +++    +.+|.|+|||..+.
T Consensus       362 ~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~  398 (426)
T d1hzua2         362 KRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL  398 (426)
T ss_dssp             CCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTT
T ss_pred             ccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCC
Confidence            5789999999  544 443    35788999999988

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.95  E-value=8.1e-26  Score=183.65  Aligned_cols=269  Identities=11%  Similarity=0.051  Sum_probs=200.5

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccc-cccccEEEEEECCCCCeE-EEecCCCcEEEEEcCCCeEEEeEEecccC--
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKG--   98 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~--   98 (327)
                      ++++|++++.|++|.+||+.+++.+.++. .|...+.+++|+|||+++ +++..++.|.+||+.+++....+......  
T Consensus         7 ~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~   86 (346)
T d1jmxb_           7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE   86 (346)
T ss_dssp             TCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred             CCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccc
Confidence            78999999999999999999999998876 356678899999999987 55667899999999999988877322211  


Q ss_pred             --CceeeEEEecCCCEEEEEe------------CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec
Q psy7482          99 --TAVNHISIHPSGKLALSVG------------KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI  164 (327)
Q Consensus        99 --~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  164 (327)
                        ..+..++|+|||+++++++            .++.+.+|+..+++..........   ...+..+.+++++.+++.+ 
T Consensus        87 ~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-  162 (346)
T d1jmxb_          87 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM---PRQVYLMRAADDGSLYVAG-  162 (346)
T ss_dssp             EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC---CSSCCCEEECTTSCEEEES-
T ss_pred             cCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeec---cCceEEEEecCCCEEEEeC-
Confidence              1256899999999988775            367789999888766544332222   1125667778888776654 


Q ss_pred             CCeEEEEEecCCceeeEecCCCceeEEEeecC---------------------------ceEEEeCCCCcEEEEEcCCCc
Q psy7482         165 QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE---------------------------TTVCTGNEESAITAYNLTDGS  217 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~---------------------------~~l~~~~~d~~i~i~d~~~~~  217 (327)
                       +.+.+|+..+++.+..+........+.++|+                           ..+.++..+..+.+||..++.
T Consensus       163 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (346)
T d1jmxb_         163 -PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK  241 (346)
T ss_dssp             -SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred             -CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCc
Confidence             5688999999888887764444444444443                           122333445567888888776


Q ss_pred             eeEE-eeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEEE
Q psy7482         218 HLWQ-IKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLVV  294 (327)
Q Consensus       218 ~~~~-~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~i  294 (327)
                      .... ...+...+..+.++  +++.+++... ++.|.+||..+++.+..+. +...+.+++|+|  ++|++++.||.|++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v  317 (346)
T d1jmxb_         242 THTQEFADLTELYFTGLRS--PKDPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAV  317 (346)
T ss_dssp             EEEEEEEECSSCEEEEEEC--SSCTTEEEEE-ESEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEE
T ss_pred             eEEEEeecccceeEEEEEe--CCCCEEEEec-CCeEEEEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence            5443 45677778888874  7777777665 4679999999999888776 345789999999  89999999999999


Q ss_pred             EEccCc
Q psy7482         295 WELNED  300 (327)
Q Consensus       295 w~~~~~  300 (327)
                      ||..+.
T Consensus       318 ~D~~t~  323 (346)
T d1jmxb_         318 FNPDTL  323 (346)
T ss_dssp             EETTTT
T ss_pred             EECccC
Confidence            999987

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.95  E-value=2.3e-23  Score=165.81  Aligned_cols=250  Identities=12%  Similarity=0.138  Sum_probs=198.9

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEE-EEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcE
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSI   78 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l-~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i   78 (327)
                      ++.+.+.+   ...+..++|  +|++| ++++.++.|++||+.+++.+..+..+.. +..++|++++..++ ++..++.+
T Consensus        23 ~~~~~i~~---g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   98 (301)
T d1l0qa2          23 KVTATIPV---GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVSPDGKQVYVTNMASSTL   98 (301)
T ss_dssp             EEEEEEEC---SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEETTTTEE
T ss_pred             eEEEEEEC---CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecccc-cccccccccccccccccccccee
Confidence            45555553   345678888  88876 5677899999999999999988887654 68899999998655 55677899


Q ss_pred             EEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCC
Q psy7482          79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEG  157 (327)
Q Consensus        79 ~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  157 (327)
                      .+|+..+++....+ ..+ .. ..++.|+|++..++.+ ..++.+.+|+..+.+..........      +..+.++|++
T Consensus        99 ~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~  169 (301)
T d1l0qa2          99 SVIDTTSNTVAGTV-KTG-KS-PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS------PKGIAVTPDG  169 (301)
T ss_dssp             EEEETTTTEEEEEE-ECS-SS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS------EEEEEECTTS
T ss_pred             eecccccceeeeec-ccc-cc-ceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCC------ceEEEeeccc
Confidence            99999999888877 333 34 7889999999877654 5578899999999887776655544      8899999999


Q ss_pred             cEEEeec--CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEe---CCCCcEEEEEcCCCceeEEeeecccceEE
Q psy7482         158 LLYAIPI--QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTG---NEESAITAYNLTDGSHLWQIKASASRIKG  231 (327)
Q Consensus       158 ~~l~~~~--~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~v~~  231 (327)
                      ..++++.  .+.+.+|+....+..........+..++++++ ..++++   ..++.|++||+.+++.+..+..+. .+.+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~-~~~~  248 (301)
T d1l0qa2         170 TKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAG  248 (301)
T ss_dssp             SEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEE
T ss_pred             cceeeecccccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCCC-CEEE
Confidence            8877775  57888888888888888887788899999998 544433   345789999999999888877554 5789


Q ss_pred             EEEEecCCCcEE-EEecCCCeEEEEEcCCCceeEEeec
Q psy7482         232 LVFFSIPQETTV-CTGNEESAITAYNLTDGSHLWHIKA  268 (327)
Q Consensus       232 ~~~~~s~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~  268 (327)
                      ++|  +|+|++| ++++.|+.|++||+++++.+.++..
T Consensus       249 va~--spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v  284 (301)
T d1l0qa2         249 IAV--TPDGKKVYVALSFCNTVSVIDTATNTITATMAV  284 (301)
T ss_dssp             EEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             EEE--eCCCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence            999  5999976 5778899999999999998888763

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.94  E-value=3.6e-25  Score=185.11  Aligned_cols=284  Identities=10%  Similarity=0.018  Sum_probs=194.5

Q ss_pred             eEEEeeeeccCCccEEEEEe--CCCEEEEecCCCeEEEEEccccccc-----cccccccccEEEEEECCCCCeE-EEecC
Q psy7482           3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS-----GALMQHEGTITCLKFTPEGSHL-ISCSD   74 (327)
Q Consensus         3 ~~~~~~~~~~h~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l-~~~~~   74 (327)
                      ++++.+.  .| ..+..++|  ||+++++++.||.|++||+.+++..     ....+|.+.+.+..|+|||++| +++..
T Consensus        53 ~v~~~~~--~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~  129 (432)
T d1qksa2          53 EIKTVLD--TG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW  129 (432)
T ss_dssp             CEEEEEE--CS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred             cEEEEEe--CC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEEcCC
Confidence            4555665  34 35889999  9999999999999999999887643     2233566777788889999986 67888


Q ss_pred             CCcEEEEEcCCCeEEEeEEeccc----------CCceeeEEEecCCCEEE-EEeCCCCEEEEEcCCCceeeeeeccccCc
Q psy7482          75 DGSIAIFRVGSWQLEKLFKKAHK----------GTAVNHISIHPSGKLAL-SVGKDKTLRTWNLVKGRSAYITNLSSYGV  143 (327)
Q Consensus        75 d~~i~iw~~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  143 (327)
                      ++.|++||..+++....+ ..+.          ......+.++|++..++ +...++.|.+||..+.+......+...  
T Consensus       130 ~~~v~i~d~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g--  206 (432)
T d1qksa2         130 PPQYVIMDGETLEPKKIQ-STRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE--  206 (432)
T ss_dssp             TTEEEEEETTTCCEEEEE-ECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC--
T ss_pred             CCeEEEEeCccccceeee-ccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEccc--
Confidence            999999999999988876 3221          12256788999887764 556679999999988776554443322  


Q ss_pred             cccceEEEEEccCCcEEEeec--CCeEEEEEecCCceeeEecC------CCceeEEEeecCceEE-Ee-CCCCcEEEEEc
Q psy7482         144 GFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQTLKS------ESKVHSVCFLNETTVC-TG-NEESAITAYNL  213 (327)
Q Consensus       144 ~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~~~~------~~~i~~~~~~~~~~l~-~~-~~d~~i~i~d~  213 (327)
                        ..+..++|+|+|+++++++  ++.+.++|..+++....+..      ........+...+.+. +. ..++.+.+|+.
T Consensus       207 --~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~  284 (432)
T d1qksa2         207 --RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGT  284 (432)
T ss_dssp             --SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEEC
T ss_pred             --CccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEeccc
Confidence              2278999999999887775  67899999988887766542      2222333332222222 22 23566667765


Q ss_pred             CCCc-------eeEEee-------------------------ecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         214 TDGS-------HLWQIK-------------------------ASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       214 ~~~~-------~~~~~~-------------------------~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      ....       ....+.                         .|.....++++   ||++.+++++.|+.+++|++.++.
T Consensus       285 ~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~v---pDg~~la~~s~d~~~k~w~~~~~~  361 (432)
T d1qksa2         285 DPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV---FDIKAMTGDGSDPEFKTLPIAEWA  361 (432)
T ss_dssp             CTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE---EEGGGCCCSSSCCCEEEECHHHHH
T ss_pred             ccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEE---EechhhcccccCCceEeccccccc
Confidence            4321       111111                         11112233444   788888899999999999876553


Q ss_pred             eeEEeecccCceEEEeeeC--cEEEEEe-----cCCcEEEEEccCc
Q psy7482         262 HLWHIKASASRIKGLASHR--NHLICIT-----SAGDLVVWELNED  300 (327)
Q Consensus       262 ~~~~~~~~~~~v~~~~~~~--~~l~~~~-----~dg~v~iw~~~~~  300 (327)
                      .+   ..|...+..++|+|  ++++.+.     .+|.|.|||..+.
T Consensus       362 ~l---~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~  404 (432)
T d1qksa2         362 GI---TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL  404 (432)
T ss_dssp             TC---CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred             cc---CCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCc
Confidence            33   35667899999999  5554443     4688999999988

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1.2e-21  Score=158.08  Aligned_cols=291  Identities=13%  Similarity=0.220  Sum_probs=193.3

Q ss_pred             EEEEecCCCeEEEEEcccccccccc--ccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCCCeEEEeE--EecccCCc
Q psy7482          26 LAASSGADETVVLYDMVKRKQSGAL--MQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEKLF--KKAHKGTA  100 (327)
Q Consensus        26 ~l~~~~~dg~v~~w~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~--~~~~~~~~  100 (327)
                      .+++++.|++|++|++.+...+..+  ..|.+.+..++|+|||++|+++ ..|+.|.+|++........+  ....... 
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~-   84 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS-   84 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC-
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCC-
Confidence            4577889999999999765433333  3578889999999999998654 55899999999765433222  1223333 


Q ss_pred             eeeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCc
Q psy7482         101 VNHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG  177 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~  177 (327)
                      +..++|+|||++|++++. ++.+.+|+...............   ...+.++.++|+++.++.+.  +..+.+|+.....
T Consensus        85 p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~  161 (333)
T d1ri6a_          85 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG---LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG  161 (333)
T ss_dssp             CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC---CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             ceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCC---CccceEEEeeecceeeeccccccceeeEEEeccCC
Confidence            788999999999999875 67899999877665444433322   23377899999999888775  6789999987654


Q ss_pred             eeeEe-------cCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCce----eEEee------ecccceEEEEEEecC
Q psy7482         178 VLQTL-------KSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSH----LWQIK------ASASRIKGLVFFSIP  238 (327)
Q Consensus       178 ~~~~~-------~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~----~~~~~------~~~~~v~~~~~~~s~  238 (327)
                      .....       ........++|+++ .. +.+....+...+++......    .....      ........+++  ++
T Consensus       162 ~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~  239 (333)
T d1ri6a_         162 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHI--TP  239 (333)
T ss_dssp             CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEE--CT
T ss_pred             cceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEE--ec
Confidence            33221       14456788999998 44 44556677788888654321    11111      12234556667  48


Q ss_pred             CCcEEEE-ecCCCeEEEEEcCCCceeEEee---cccCceEEEeeeC--cEEEEEe-cCCcEEEEEccCccCCCceeeeec
Q psy7482         239 QETTVCT-GNEESAITAYNLTDGSHLWHIK---ASASRIKGLASHR--NHLICIT-SAGDLVVWELNEDVTREPQRVSAT  311 (327)
Q Consensus       239 ~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~--~~l~~~~-~dg~v~iw~~~~~~~~~~~~~~~~  311 (327)
                      ++++++. +..++.+.+|++..........   .....+.+++|+|  ++|++++ .++.|++|+++... -....+...
T Consensus       240 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~t-G~l~~~~~~  318 (333)
T d1ri6a_         240 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQ-GLLHEKGRY  318 (333)
T ss_dssp             TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTT-TEEEEEEEE
T ss_pred             ccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCC-CcEEEEEec
Confidence            8876654 5667899999987665433332   3345678999999  7666655 56889999775431 134445455


Q ss_pred             CCCCceEEEEeC
Q psy7482         312 NDGCRFTCLAIR  323 (327)
Q Consensus       312 ~~~~~i~~l~~~  323 (327)
                      ..+....+++++
T Consensus       319 ~~g~~p~~v~~~  330 (333)
T d1ri6a_         319 AVGQGPMWVVVN  330 (333)
T ss_dssp             ECSSSCCEEEEE
T ss_pred             cCCCCCcEEEEE
Confidence            555545566553

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.92  E-value=5e-21  Score=157.00  Aligned_cols=298  Identities=8%  Similarity=-0.030  Sum_probs=207.9

Q ss_pred             eccCCccEEEEEe--CCCEEEEe-----cCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEec---------
Q psy7482          10 THSHTASVRSVAA--TSKLAASS-----GADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS---------   73 (327)
Q Consensus        10 ~~~h~~~v~~~~~--~~~~l~~~-----~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------   73 (327)
                      ..++..++.++++  +++.++..     +..+.|.+||..+++.+.++..+..+  .++|+|||++|++++         
T Consensus        16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~   93 (373)
T d2madh_          16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKG   93 (373)
T ss_pred             cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCccccc
Confidence            3467888888888  89888764     23467999999999999888766544  799999999998875         


Q ss_pred             -CCCcEEEEEcCCCeEEEeEEecccCC------ceeeEEEecCCCEEEEEe--CCCCEEEEEcCCCceeeeeeccccCcc
Q psy7482          74 -DDGSIAIFRVGSWQLEKLFKKAHKGT------AVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSAYITNLSSYGVG  144 (327)
Q Consensus        74 -~d~~i~iw~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~  144 (327)
                       .++.|.+||..+++....+ ..+...      ....+.|+++++.++...  .++.+.+|+....+......       
T Consensus        94 ~~~~~v~v~D~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-------  165 (373)
T d2madh_          94 KRTDYVEVFDPVTFLPIADI-ELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS-------  165 (373)
T ss_pred             ccceEEEEEECCCCcEEEEE-ecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEec-------
Confidence             4578999999999988777 333322      124578889888766554  45678889887765433221       


Q ss_pred             ccceEEEEEccCCcEEE-eec-CCeEEEEEecCCceeeEec-------CCCceeEEEeecCceEEEeCCCCcEEEEEcCC
Q psy7482         145 FENLDSVVWSPEGLLYA-IPI-QNKAVVFSVEKAGVLQTLK-------SESKVHSVCFLNETTVCTGNEESAITAYNLTD  215 (327)
Q Consensus       145 ~~~v~~~~~~~~~~~l~-~~~-~~~i~i~d~~~~~~~~~~~-------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~  215 (327)
                        ...++.++|+++.+. +.. |+.+.+|+...++......       .........+.+++.++..+.++.+.+|+...
T Consensus       166 --~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  243 (373)
T d2madh_         166 --SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISA  243 (373)
T ss_pred             --cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCC
Confidence              156788999987554 344 9999999999887766554       11223445566667777888899999999887


Q ss_pred             CceeEE--eeeccc----------ceEEEEEEe--------cCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEE
Q psy7482         216 GSHLWQ--IKASAS----------RIKGLVFFS--------IPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKG  275 (327)
Q Consensus       216 ~~~~~~--~~~~~~----------~v~~~~~~~--------s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~  275 (327)
                      ......  ...+..          ....+++.+        ..++..++....++.+.+||..+++.+..+. +...+.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~  322 (373)
T d2madh_         244 AGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDA  322 (373)
T ss_pred             CeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeE
Confidence            653221  111111          122233320        1233344556677889999999999888776 4557899


Q ss_pred             EeeeC--c--EEEEEecCCcEEEEEccCccCCCceeeeec-CCCCceEEEEeCCC
Q psy7482         276 LASHR--N--HLICITSAGDLVVWELNEDVTREPQRVSAT-NDGCRFTCLAIRPP  325 (327)
Q Consensus       276 ~~~~~--~--~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~-~~~~~i~~l~~~p~  325 (327)
                      ++|+|  +  ++++++.|+.|++||+.++     +.+... .++...+.|++.++
T Consensus       323 ~a~spDG~~~l~vt~~~d~~v~v~D~~tg-----~~~~~~~~~g~~P~~l~~~~~  372 (373)
T d2madh_         323 ISVAQDGGPDLYALSAGTEVLHIYDAGAG-----DQDQSTVELGSGPQVLSVMNE  372 (373)
T ss_pred             EEECCCCCEEEEEEeCCCCeEEEEECCCC-----CEEEEECCCCCCCcEEEEecC
Confidence            99999  3  4578899999999999998     233333 35566777777654

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.91  E-value=1.7e-22  Score=163.18  Aligned_cols=251  Identities=11%  Similarity=0.158  Sum_probs=184.6

Q ss_pred             CeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEE-EEeCCCCEEEEEcCCCceeeeeeccccCccc
Q psy7482          67 SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLAL-SVGKDKTLRTWNLVKGRSAYITNLSSYGVGF  145 (327)
Q Consensus        67 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  145 (327)
                      +++++++.|++|.+||+.+++.+..+........+.+++|+|||++++ +++.++.|.+||+.+++.+............
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~   81 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV   81 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccc
Confidence            589999999999999999999999884444444488999999999875 5667899999999999988777666544334


Q ss_pred             cceEEEEEccCCcEEEeec-------------CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEE
Q psy7482         146 ENLDSVVWSPEGLLYAIPI-------------QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAY  211 (327)
Q Consensus       146 ~~v~~~~~~~~~~~l~~~~-------------~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~  211 (327)
                      ..+..++|+|+++.++++.             +..+.+||..+++....+.....+..++++|+ .++++++.  .+.+|
T Consensus        82 ~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~~  159 (337)
T d1pbyb_          82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGR--DLHVM  159 (337)
T ss_dssp             ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESS--SEEEE
T ss_pred             cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCCCCEEEEEcC--Cccee
Confidence            4567899999999887653             45788999999999999988888999999999 67777764  47789


Q ss_pred             EcCCCceeEEeeecccceEE------EEE---------------EecCCCcEEEEecCCCeEEEEEcCCCceeE-Eeecc
Q psy7482         212 NLTDGSHLWQIKASASRIKG------LVF---------------FSIPQETTVCTGNEESAITAYNLTDGSHLW-HIKAS  269 (327)
Q Consensus       212 d~~~~~~~~~~~~~~~~v~~------~~~---------------~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~  269 (327)
                      |..+++....+..+......      ..+               ....+......+..++.+.+|+..++.... .+..+
T Consensus       160 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T d1pbyb_         160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM  239 (337)
T ss_dssp             ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred             eeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCC
Confidence            99998877766543221100      000               000122222233445679999998887554 45566


Q ss_pred             cCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         270 ASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       270 ~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      ...+..+++++  .+++.  .++.|++||+.+.     ..+.....+..+.+++|+|+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~--~~~~i~v~d~~~~-----~~~~~~~~~~~~~~~~~s~dG  291 (337)
T d1pbyb_         240 DVFYFSTAVNPAKTRAFG--AYNVLESFDLEKN-----ASIKRVPLPHSYYSVNVSTDG  291 (337)
T ss_dssp             SSCEEEEEECTTSSEEEE--EESEEEEEETTTT-----EEEEEEECSSCCCEEEECTTS
T ss_pred             CcceEEEEecccceEEEE--ccccEEEEECCCC-----cEEEEEcCCCCEEEEEECCCC
Confidence            77788888888  44443  3689999999988     444444566779999999973

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=1.3e-21  Score=158.58  Aligned_cols=257  Identities=12%  Similarity=0.059  Sum_probs=181.4

Q ss_pred             EEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEE-EeCCCCEEEEEcCCCceeeeeec
Q psy7482          60 LKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALS-VGKDKTLRTWNLVKGRSAYITNL  138 (327)
Q Consensus        60 ~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~  138 (327)
                      ++|++++++|++++.+++|.+||+.+++.+.++...+... +.+++|+|||+++++ +..++.|.+||+.+++.......
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~-p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~   80 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFG-PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL   80 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCS-SCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCC-cceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecc
Confidence            4689999999999999999999999999999884455555 889999999998754 55789999999999988776654


Q ss_pred             cccC-ccccceEEEEEccCCcEEEeec-------------CCeEEEEEecCCceeeEec---CCCceeEEEeecCceEEE
Q psy7482         139 SSYG-VGFENLDSVVWSPEGLLYAIPI-------------QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNETTVCT  201 (327)
Q Consensus       139 ~~~~-~~~~~v~~~~~~~~~~~l~~~~-------------~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~  201 (327)
                      .... .....+..++|+|||++++++.             ++.+.+||..+++....+.   ....+..+.+++++.+++
T Consensus        81 ~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (346)
T d1jmxb_          81 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYV  160 (346)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEE
T ss_pred             cccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEE
Confidence            4331 1223467899999999887653             5678889988877654443   445666777777766655


Q ss_pred             eCCCCcEEEEEcCCCceeEEeeecccceEEEEEE------------------------ecCCCcEEEEecCCCeEEEEEc
Q psy7482         202 GNEESAITAYNLTDGSHLWQIKASASRIKGLVFF------------------------SIPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~------------------------~s~~~~~l~~~~~d~~i~i~d~  257 (327)
                      .+  +.+.+|+..+++.+..+..+.. ...+.+.                        ..+....++++..++.+.+||.
T Consensus       161 ~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (346)
T d1jmxb_         161 AG--PDIYKMDVKTGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL  237 (346)
T ss_dssp             ES--SSEEEECTTTCCEEEEECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred             eC--CcceEEEccCCCEEEEEecCCC-ccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEEC
Confidence            54  4588999998888777654432 1122221                        0122233344455667888998


Q ss_pred             CCCceeE-EeecccCceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCCC
Q psy7482         258 TDGSHLW-HIKASASRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPPV  326 (327)
Q Consensus       258 ~~~~~~~-~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~~  326 (327)
                      .++.... ....+...+..+.+++  ..++... ++.|++||..+.     +.+.....+..+.+++|+||-
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~-----~~~~~~~~~~~~~~va~s~DG  303 (346)
T d1jmxb_         238 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQR-----KLIKAANLDHTYYCVAFDKKG  303 (346)
T ss_dssp             TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTT-----EEEEEEECSSCCCEEEECSSS
T ss_pred             CCCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCC-----cEEEEEcCCCCEEEEEEcCCC
Confidence            8887544 4556777888888888  5555554 567999999887     344444556679999999973

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=2.8e-20  Score=151.35  Aligned_cols=291  Identities=11%  Similarity=0.069  Sum_probs=195.2

Q ss_pred             EeCCCEEEEe-----cCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCCcEEEEEcCC
Q psy7482          21 AATSKLAASS-----GADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGS   85 (327)
Q Consensus        21 ~~~~~~l~~~-----~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~iw~~~~   85 (327)
                      +.|++.++..     ..++.|.+||..+++.+.++..+..+  .++|+|||++|++++          .|+.|.+||..+
T Consensus        10 spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t   87 (355)
T d2bbkh_          10 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT   87 (355)
T ss_dssp             CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred             CCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCC
Confidence            4488887764     34567999999999998888765544  699999999888653          478999999999


Q ss_pred             CeEEEeEEecccC------CceeeEEEecCCCEEEEEe--CCCCEEEEEcCCCceeeeeeccccCc--cccceEEEEEcc
Q psy7482          86 WQLEKLFKKAHKG------TAVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSAYITNLSSYGV--GFENLDSVVWSP  155 (327)
Q Consensus        86 ~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~  155 (327)
                      ++....+ ..+..      .....+.|+++++.++.+.  .+..+.+|+..+++....+.......  .......+.+++
T Consensus        88 ~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (355)
T d2bbkh_          88 LLPTADI-ELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCR  166 (355)
T ss_dssp             CCEEEEE-EETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEET
T ss_pred             CCEEEEE-ecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcC
Confidence            9988876 32221      1146789999999888775  45679999999988776655443210  011234456666


Q ss_pred             CCcEEEeec--CCeEEEEEecCCceeeEecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeE--Eeeecc----
Q psy7482         156 EGLLYAIPI--QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLW--QIKASA----  226 (327)
Q Consensus       156 ~~~~l~~~~--~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~----  226 (327)
                      +++.+....  ++.+.+++......    .+...+....+.++ ..++.++.++.+++|++..++...  ....+.    
T Consensus       167 dg~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~  242 (355)
T d2bbkh_         167 DGSLAKVAFGTEGTPEITHTEVFHP----EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER  242 (355)
T ss_dssp             TSCEEEEECCSSSCCEEEECCCCSC----TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHH
T ss_pred             CCCEEEEEecCCCeEEEEecccccc----eecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceE
Confidence            666555543  44555554433321    12333445566666 788888999999999998775421  111111    


Q ss_pred             ------cceEEEEEEecCCCcEEEEecCC----------CeEEEEEcCCCceeEEeecccCceEEEeeeC--c--EEEEE
Q psy7482         227 ------SRIKGLVFFSIPQETTVCTGNEE----------SAITAYNLTDGSHLWHIKASASRIKGLASHR--N--HLICI  286 (327)
Q Consensus       227 ------~~v~~~~~~~s~~~~~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~--~l~~~  286 (327)
                            .....+++.  +++..++....+          ..|.+||..+++.+..+..+ ..+.+++|+|  +  +++++
T Consensus       243 ~~~~~p~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~-~~~~~~a~spDG~~~l~v~~  319 (355)
T d2bbkh_         243 ADGWRPGGWQQVAYH--RALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALS  319 (355)
T ss_dssp             HTTEEECSSSCEEEE--TTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEE
T ss_pred             eeeeeccceEEEEEe--CCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCC-CCEEEEEEcCCCCeEEEEEE
Confidence                  123346664  788877664432          47999999999988887744 4688999999  3  45677


Q ss_pred             ecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         287 TSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       287 ~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +.|+.|++||..++.  ....+.  ..+....++.+.++
T Consensus       320 ~~d~~i~v~D~~tg~--~~~~i~--~~G~~p~~i~~~d~  354 (355)
T d2bbkh_         320 TGDKTLYIHDAESGE--ELRSVN--QLGHGPQVITTADM  354 (355)
T ss_dssp             TTTTEEEEEETTTCC--EEEEEC--CCCSSCCEEECCCC
T ss_pred             CCCCEEEEEECCCCC--EEEEEe--CcCCCccEEEeCCC
Confidence            789999999999982  222222  34555566665543

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=7e-18  Score=135.65  Aligned_cols=249  Identities=10%  Similarity=0.140  Sum_probs=169.5

Q ss_pred             cCCccEEEEEe--CCCEEEE-ecCCCeEEEEEccccccccccc---cccccEEEEEECCCCCeEEEecC-CCcEEEEEcC
Q psy7482          12 SHTASVRSVAA--TSKLAAS-SGADETVVLYDMVKRKQSGALM---QHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVG   84 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~-~~~dg~v~~w~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iw~~~   84 (327)
                      .|.+.+..|+|  ||++|++ +..|+.|++|++........+.   .+...+..++|+|||++|++++. ++.+.+|+..
T Consensus        34 ~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~  113 (333)
T d1ri6a_          34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE  113 (333)
T ss_dssp             ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred             cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccc
Confidence            57888999999  9998854 5568999999998665443332   23455778999999999988875 6789999988


Q ss_pred             CCeEEEeEEecccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccc-cCccccceEEEEEccCCcEEEe
Q psy7482          85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSS-YGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      ................+.++.++|++++++.++. +..+.+|+.............. ..........++|++++..+..
T Consensus       114 ~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~  193 (333)
T d1ri6a_         114 DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYC  193 (333)
T ss_dssp             TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEE
T ss_pred             cccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEe
Confidence            7766555433333333889999999998888775 4568999987654333221111 1111233688999999988766


Q ss_pred             ec--CCeEEEEEecCCce----eeEec-------CCCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCceeEEee---e
Q psy7482         163 PI--QNKAVVFSVEKAGV----LQTLK-------SESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSHLWQIK---A  224 (327)
Q Consensus       163 ~~--~~~i~i~d~~~~~~----~~~~~-------~~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~---~  224 (327)
                      ..  .+...+++......    .....       .......++++++ + .++.+..++.+.+|++..........   .
T Consensus       194 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (333)
T d1ri6a_         194 VNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP  273 (333)
T ss_dssp             EETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE
T ss_pred             eccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeC
Confidence            64  67777887654321    11211       2345677888998 4 45566788899999987665443332   2


Q ss_pred             cccceEEEEEEecCCCcEEEEec-CCCeEEEEEc--CCCce
Q psy7482         225 SASRIKGLVFFSIPQETTVCTGN-EESAITAYNL--TDGSH  262 (327)
Q Consensus       225 ~~~~v~~~~~~~s~~~~~l~~~~-~d~~i~i~d~--~~~~~  262 (327)
                      ....+..++|  +|+|++|++++ .++.|++|++  ++|++
T Consensus       274 ~~~~p~~~a~--spDGk~l~va~~~~~~v~v~~id~~tG~l  312 (333)
T d1ri6a_         274 TETQPRGFNV--DHSGKYLIAAGQKSHHISVYEIVGEQGLL  312 (333)
T ss_dssp             CSSSCCCEEE--CTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred             CCCCeeEEEE--eCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence            3345778999  59999877665 5688999954  55643

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.85  E-value=1.1e-17  Score=136.74  Aligned_cols=257  Identities=11%  Similarity=0.046  Sum_probs=181.7

Q ss_pred             cCCccEEEEEe--CCCEEEEec----------CCCeEEEEEccccccccccccccccE-------EEEEECCCCCeEEEe
Q psy7482          12 SHTASVRSVAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQHEGTI-------TCLKFTPEGSHLISC   72 (327)
Q Consensus        12 ~h~~~v~~~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~   72 (327)
                      ++..+  .++|  ||++|++++          .++.|.+||..+++.+..+..+....       ..+.|+++++.++..
T Consensus        65 ~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~  142 (373)
T d2madh_          65 GGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFF  142 (373)
T ss_pred             CCCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEE
Confidence            44444  4556  999998874          45789999999999888776655443       446788888876554


Q ss_pred             --cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEE-EEEeCCCCEEEEEcCCCceeeeeeccccCc-cccce
Q psy7482          73 --SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITNLSSYGV-GFENL  148 (327)
Q Consensus        73 --~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~v  148 (327)
                        ..++.+.+|+....+.....     .. ..++.++|+++.+ ++.+.|+.+.+|+...++............ .....
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (373)
T d2madh_         143 QFAAGPAVGLVVQGGSSDDQLL-----SS-PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLT  216 (373)
T ss_pred             EEcCCCceEEeeccCCeEEEEe-----cc-ceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCcccee
Confidence              34567888988876654443     23 5678899988654 677889999999998877665543322211 11224


Q ss_pred             EEEEEccCCcEEEeecCCeEEEEEecCCceeeEec-------------CCCceeEEEeecC-----------ceEEEeCC
Q psy7482         149 DSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-------------SESKVHSVCFLNE-----------TTVCTGNE  204 (327)
Q Consensus       149 ~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-------------~~~~i~~~~~~~~-----------~~l~~~~~  204 (327)
                      ....+.+++.+++.+.++.+.+|+...........             .......++++++           ..++....
T Consensus       217 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  296 (373)
T d2madh_         217 QPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAA  296 (373)
T ss_pred             eeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecC
Confidence            45667777777777778999999987765432221             1122333445544           23445667


Q ss_pred             CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcE--EEEecCCCeEEEEEcCCCceeEEeecccCceEEEeee
Q psy7482         205 ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETT--VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASH  279 (327)
Q Consensus       205 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  279 (327)
                      ++.+.+||..+++.+..+. +...+..++|  +|||+.  +++++.|+.|++||+.+++.+.++..+....+.+++.
T Consensus       297 ~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~--spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~  370 (373)
T d2madh_         297 AKEVTSVTGLVGQTSSQIS-LGHDVDAISV--AQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVM  370 (373)
T ss_pred             CCeEEEEECCCCcEEEEec-CCCCeeEEEE--CCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEe
Confidence            7889999999999888775 4566889999  589884  4688999999999999999999999887677776654

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.79  E-value=1.3e-16  Score=129.44  Aligned_cols=245  Identities=9%  Similarity=0.085  Sum_probs=159.5

Q ss_pred             EEEe--CCCEEEEec----------CCCeEEEEEcccccccccccccc-------ccEEEEEECCCCCeEEEe--cCCCc
Q psy7482          19 SVAA--TSKLAASSG----------ADETVVLYDMVKRKQSGALMQHE-------GTITCLKFTPEGSHLISC--SDDGS   77 (327)
Q Consensus        19 ~~~~--~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~--~~d~~   77 (327)
                      .++|  ||++|++++          .|+.|++||+.+++....+..+.       .....++|+|++++++.+  +.+..
T Consensus        51 ~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~  130 (355)
T d2bbkh_          51 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA  130 (355)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred             ceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCce
Confidence            4556  999887643          47899999999998877654332       223567899999988766  45678


Q ss_pred             EEEEEcCCCeEEEeEEecccCC------ceeeEEEecCCCEEEEEe-CCCCEEEEEcCCCceeeeeeccccCccccceEE
Q psy7482          78 IAIFRVGSWQLEKLFKKAHKGT------AVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDS  150 (327)
Q Consensus        78 i~iw~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~  150 (327)
                      +.+|+..+++....+ ..+...      +...+.++++++.++... .++.+.+++......          .+...+..
T Consensus       131 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~----------~~~~~~~~  199 (355)
T d2bbkh_         131 VGVVDLEGKAFKRML-DVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP----------EDEFLINH  199 (355)
T ss_dssp             EEEEETTTTEEEEEE-ECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC----------TTSCBCSC
T ss_pred             eeeeecCCCcEeeEE-ecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEecccccc----------eecceeee
Confidence            999999999988777 322211      022344555554444332 223344443332221          11122445


Q ss_pred             EEEccCCcEEEeec-CCeEEEEEecCCceeeE--ec-----------CCCceeEEEeecC-ceEEEeCC----------C
Q psy7482         151 VVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQT--LK-----------SESKVHSVCFLNE-TTVCTGNE----------E  205 (327)
Q Consensus       151 ~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~--~~-----------~~~~i~~~~~~~~-~~l~~~~~----------d  205 (327)
                      ..+.+++..++.+. ++.+++|++..++....  ..           .......++++++ ..++....          .
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  279 (355)
T d2bbkh_         200 PAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS  279 (355)
T ss_dssp             CEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred             ccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCC
Confidence            56677776666665 89999999987754221  11           1123445788888 44444322          2


Q ss_pred             CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCc--EEEEecCCCeEEEEEcCCCceeEEeecccCceEEEe
Q psy7482         206 SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQET--TVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLA  277 (327)
Q Consensus       206 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~  277 (327)
                      ..|.+||..+++.+..+..+ ..+.+++|  +|+|+  ++++++.|+.|++||+++++.+.++.++......+.
T Consensus       280 ~~v~v~d~~t~~~~~~~~~~-~~~~~~a~--spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~  350 (355)
T d2bbkh_         280 RFVVVLDAKTGERLAKFEMG-HEIDSINV--SQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVIT  350 (355)
T ss_dssp             EEEEEEETTTCCEEEEEEEE-EEECEEEE--CCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEE
T ss_pred             CeEEEEeCCCCcEEEEecCC-CCEEEEEE--cCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeCcCCCccEEE
Confidence            47999999999988887644 45789999  48987  456778899999999999999999987654444443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.76  E-value=1.3e-16  Score=130.26  Aligned_cols=292  Identities=9%  Similarity=-0.033  Sum_probs=182.6

Q ss_pred             CccEEEEEe--CCCE--E-EEecCCCe--EEEEEccccccccccccccccEEEEEECCCCCeEEEec----------CCC
Q psy7482          14 TASVRSVAA--TSKL--A-ASSGADET--VVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDG   76 (327)
Q Consensus        14 ~~~v~~~~~--~~~~--l-~~~~~dg~--v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~   76 (327)
                      .++...++.  +++.  + +....++.  |.+||..+++.+..+..+...  .++|+|||+.|++.+          .|+
T Consensus        19 ~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~   96 (368)
T d1mdah_          19 DGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTD   96 (368)
T ss_dssp             CCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEE
T ss_pred             CCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCCEEEEEcccCccccccccCC
Confidence            333344444  6664  2 23444444  667799999988888766654  588999999988754          467


Q ss_pred             cEEEEEcCCCeEEEeEEecccC------CceeeEEEecCCCEEEEEe-CCCCEEEEEcCCCceeeeeeccccCccccceE
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKG------TAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITNLSSYGVGFENLD  149 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~  149 (327)
                      .|.+||..+++....+ ..+..      .....++|+|||++++++. .++.+.+||+.+++.......+....      
T Consensus        97 ~v~v~D~~t~~~~~~i-~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~------  169 (368)
T d1mdah_          97 YVEVFDPVTFLPIADI-ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH------  169 (368)
T ss_dssp             EEEEECTTTCCEEEEE-EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCC------
T ss_pred             eEEEEECCCCcEeeee-cCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcce------
Confidence            8999999999988877 33221      1145689999999998776 57999999999998877765544310      


Q ss_pred             EEEEccCCcEEEeecCCeEEEEEecCCceeeEec-------CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEe
Q psy7482         150 SVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-------SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-------~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  222 (327)
                       +...+...+++.+.||.+..++...........       +...+....+.+++..+.. ..+.+++++..........
T Consensus       170 -~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~v~~~~~~~~~~~~~~  247 (368)
T d1mdah_         170 -IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA-VASSILQGDIPAAGATMKA  247 (368)
T ss_dssp             -CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEEC-BSSCCEEEECCSSCCEEEC
T ss_pred             -EccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEEEe-cCCCEEEEeecCCceEEEe
Confidence             111112222222236777677665544332221       2333445566666444332 3455666776554432211


Q ss_pred             --ee----------cccceEEEEEEecCCCcEEEEecC---------CCeEEEEEcCCCceeEEeecccCceEEEeeeC-
Q psy7482         223 --KA----------SASRIKGLVFFSIPQETTVCTGNE---------ESAITAYNLTDGSHLWHIKASASRIKGLASHR-  280 (327)
Q Consensus       223 --~~----------~~~~v~~~~~~~s~~~~~l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-  280 (327)
                        ..          .......++++  +++..++....         ...|.+||..+++.+..+... ..+.+++|+| 
T Consensus       248 ~~~~~~~~~~~~~~~~~g~~~~a~~--~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~~a~spD  324 (368)
T d1mdah_         248 AIDGNESGRKADNFRSAGFQMVAKL--KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQD  324 (368)
T ss_dssp             CCCSSCTHHHHTTEEECSSSCEEEE--TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCS
T ss_pred             ecccccceeeeeeecCCCceeEEEc--CCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCC-CceeEEEECCC
Confidence              11          11122345664  77776655322         236999999999988887744 4788999999 


Q ss_pred             -c--EEEEEecCCcEEEEEccCccCCCceeeeecCCCCceEEEEeCC
Q psy7482         281 -N--HLICITSAGDLVVWELNEDVTREPQRVSATNDGCRFTCLAIRP  324 (327)
Q Consensus       281 -~--~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~i~~l~~~p  324 (327)
                       +  +++++..|+.|++||..++     +.+.....+...+.|++-+
T Consensus       325 G~~~ly~s~~~~~~v~v~D~~tg-----k~~~~i~~g~~P~~l~~~~  366 (368)
T d1mdah_         325 GASDNYANSAGTEVLDIYDAASD-----QDQSSVELDKGPESLSVQN  366 (368)
T ss_dssp             SSCEEEEEETTTTEEEEEESSSC-----EEEEECCCCSCCCEEECCC
T ss_pred             CCEEEEEEeCCCCeEEEEECCCC-----CEEEEEECCCCCCEEEEec
Confidence             3  3567778899999999998     3444445455566666644

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.72  E-value=2.3e-15  Score=122.73  Aligned_cols=250  Identities=9%  Similarity=0.018  Sum_probs=163.9

Q ss_pred             cCCccEEEEEeCCCEEEEec----------CCCeEEEEEccccccccccccccc-------cEEEEEECCCCCeEEEec-
Q psy7482          12 SHTASVRSVAATSKLAASSG----------ADETVVLYDMVKRKQSGALMQHEG-------TITCLKFTPEGSHLISCS-   73 (327)
Q Consensus        12 ~h~~~v~~~~~~~~~l~~~~----------~dg~v~~w~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~-   73 (327)
                      ++......++.||+.|++++          .|+.|.+||..++++...+..+..       ....++|+|||++|+++. 
T Consensus        64 ~~~~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~  143 (368)
T d1mdah_          64 GAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLF  143 (368)
T ss_dssp             ECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEEC
T ss_pred             CCCCCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeC
Confidence            34444333344899888653          477899999999988777654322       234689999999998775 


Q ss_pred             CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccc-cCccccceEEEE
Q psy7482          74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSS-YGVGFENLDSVV  152 (327)
Q Consensus        74 ~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~  152 (327)
                      .++.+.+||+.+++....+ ..+....+    +......++..+.||.+..+++............. .......+....
T Consensus       144 ~~~~v~~~d~~~~~~~~~~-~~~~~~~~----~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (368)
T d1mdah_         144 GSSAAAGLSVPGASDDQLT-KSASCFHI----HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQ  218 (368)
T ss_dssp             SSSCEEEEEETTTEEEEEE-ECSSCCCC----EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEE
T ss_pred             CCCeEEEEECCCCcEeEEe-eccCcceE----ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecc
Confidence            5799999999999998887 33332211    11234566777788888888876654432221111 111222355677


Q ss_pred             EccCCcEEEeecCCeEEEEEecCCceeeEec-------------CCCceeEEEeecC-ceEEEeC---------CCCcEE
Q psy7482         153 WSPEGLLYAIPIQNKAVVFSVEKAGVLQTLK-------------SESKVHSVCFLNE-TTVCTGN---------EESAIT  209 (327)
Q Consensus       153 ~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~~-------------~~~~i~~~~~~~~-~~l~~~~---------~d~~i~  209 (327)
                      +.+++..+... ++.+++++...+.......             .......++++++ +.++...         ....|.
T Consensus       219 ~~~~g~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~  297 (368)
T d1mdah_         219 ANYPGMLVWAV-ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS  297 (368)
T ss_dssp             ETTTTEEEECB-SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred             cccCcEEEEec-CCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEE
Confidence            77777655443 5566677766554332221             0122345778887 5444332         123589


Q ss_pred             EEEcCCCceeEEeeecccceEEEEEEecCCCc--EEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         210 AYNLTDGSHLWQIKASASRIKGLVFFSIPQET--TVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       210 i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      +||..+++.+..+... ..+..++|  +|||+  .++++..|+.|++||..+++.+.++....
T Consensus       298 v~D~~t~~~~~~~~~~-~~~~~~a~--spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g~  357 (368)
T d1mdah_         298 SVTASVGQTSGPISNG-HDSDAIIA--AQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK  357 (368)
T ss_dssp             EEESSSCCEEECCEEE-EEECEEEE--CCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred             EEECCCCcEeEEecCC-CceeEEEE--CCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECCC
Confidence            9999999988887643 56888999  48986  35677889999999999999999887554

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.71  E-value=2.6e-15  Score=122.29  Aligned_cols=256  Identities=11%  Similarity=0.054  Sum_probs=173.5

Q ss_pred             EEEecCCCeEEEEEcccccccccccc------------------------------ccccEEEEEECCCCCeEEEe-cCC
Q psy7482          27 AASSGADETVVLYDMVKRKQSGALMQ------------------------------HEGTITCLKFTPEGSHLISC-SDD   75 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~~~~~~~~~~------------------------------~~~~v~~~~~~~~~~~l~~~-~~d   75 (327)
                      +++|+.+|.|++|++.+++.+..+.-                              |........++|||++|++. ..+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            66888999999999988876554321                              22334555567899988655 567


Q ss_pred             CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC--EEEEEeCCC-----------------CEEEEEcCCCceeeee
Q psy7482          76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK--LALSVGKDK-----------------TLRTWNLVKGRSAYIT  136 (327)
Q Consensus        76 ~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg-----------------~i~iwd~~~~~~~~~~  136 (327)
                      ..|.++|+.+++....+....... +..++|+|+++  +++..+.+.                 .+..+|..+.+.....
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~g-phgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI  172 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQA-IHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV  172 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCC-EEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecCCCCC-ccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEE
Confidence            899999999999888774444555 99999999987  444444332                 2345787777776666


Q ss_pred             eccccCccccceEEEEEccCCcEEEeec-C-----------------------------------------CeEEEEEec
Q psy7482         137 NLSSYGVGFENLDSVVWSPEGLLYAIPI-Q-----------------------------------------NKAVVFSVE  174 (327)
Q Consensus       137 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-----------------------------------------~~i~i~d~~  174 (327)
                      .....      ...+.++|+|+++++++ +                                         +.+.+++..
T Consensus       173 ~v~~~------p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~  246 (441)
T d1qnia2         173 IVDGN------LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRG  246 (441)
T ss_dssp             EESSC------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSS
T ss_pred             ecCCC------ccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEccc
Confidence            55544      77889999998776653 1                                         233334344


Q ss_pred             CCceeeEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCcee--------EEeeecc---cceEEEEEEecCCCc
Q psy7482         175 KAGVLQTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSHL--------WQIKASA---SRIKGLVFFSIPQET  241 (327)
Q Consensus       175 ~~~~~~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~--------~~~~~~~---~~v~~~~~~~s~~~~  241 (327)
                      ..+.+..+........+.++|| ++ ++++..+++|.+||+.+....        ..+.++.   -.....+|  +++|.
T Consensus       247 ~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~f--d~~g~  324 (441)
T d1qnia2         247 ESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTF--DGRGN  324 (441)
T ss_dssp             SCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEE--CSSSE
T ss_pred             CCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCccccee--cCCce
Confidence            4455566665555788999999 54 456789999999998653211        1111111   11233467  48899


Q ss_pred             EEEEecCCCeEEEEEcCC---------C-ceeEEe-----ecccCceEEEeeeC--cEEEEE---ecCCc
Q psy7482         242 TVCTGNEESAITAYNLTD---------G-SHLWHI-----KASASRIKGLASHR--NHLICI---TSAGD  291 (327)
Q Consensus       242 ~l~~~~~d~~i~i~d~~~---------~-~~~~~~-----~~~~~~v~~~~~~~--~~l~~~---~~dg~  291 (327)
                      .+.+...|..|..|++..         . ..+..+     .+|...+.+.+++|  ++|+++   +.|..
T Consensus       325 ~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~  394 (441)
T d1qnia2         325 AYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRF  394 (441)
T ss_dssp             EEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGS
T ss_pred             EEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCccccccC
Confidence            999999999999999742         1 123333     46777777888889  999999   55543

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.68  E-value=1e-14  Score=122.84  Aligned_cols=140  Identities=15%  Similarity=0.184  Sum_probs=103.3

Q ss_pred             EEEe--CCCEEEEecCCCeEEEEEcccccccc-----ccccccccEEEEEECCCCCeEEEecC---------CCcEEEEE
Q psy7482          19 SVAA--TSKLAASSGADETVVLYDMVKRKQSG-----ALMQHEGTITCLKFTPEGSHLISCSD---------DGSIAIFR   82 (327)
Q Consensus        19 ~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~iw~   82 (327)
                      .+.|  +++++..  .|+.+.+||+.+++...     .+..|...|.++.|+|||++|+.++.         ++.+.+||
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d   98 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD   98 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEE
Confidence            3566  6666653  47789999999987654     44556788999999999999998743         56789999


Q ss_pred             cCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCc-------------cccceE
Q psy7482          83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGV-------------GFENLD  149 (327)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------------~~~~v~  149 (327)
                      +.+++.. .+ ..+... +..+.|+|||+.++.. .++.+.+|+..+++............             ......
T Consensus        99 ~~~~~~~-~l-~~~~~~-~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~  174 (470)
T d2bgra1          99 LNKRQLI-TE-ERIPNN-TQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS  174 (470)
T ss_dssp             TTTTEEC-CS-SCCCTT-EEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred             CCCCccc-cc-ccCCcc-ccccccccCcceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCcc
Confidence            9988754 34 566666 9999999999999986 46789999998887654432221100             112245


Q ss_pred             EEEEccCCcEEEeec
Q psy7482         150 SVVWSPEGLLYAIPI  164 (327)
Q Consensus       150 ~~~~~~~~~~l~~~~  164 (327)
                      .+.|+|||+.++...
T Consensus       175 ~~~wSPDGk~ia~~~  189 (470)
T d2bgra1         175 ALWWSPNGTFLAYAQ  189 (470)
T ss_dssp             CEEECTTSSEEEEEE
T ss_pred             ccEECCCCCccceeE
Confidence            688999999998864

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.63  E-value=1.9e-13  Score=114.89  Aligned_cols=286  Identities=10%  Similarity=0.041  Sum_probs=166.0

Q ss_pred             eeccCCccEEEEEe--CCCEEEEec---------CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCc
Q psy7482           9 VTHSHTASVRSVAA--TSKLAASSG---------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS   77 (327)
Q Consensus         9 ~~~~h~~~v~~~~~--~~~~l~~~~---------~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~   77 (327)
                      .+..|...|.++.|  |+++|+.++         .++.+.+||+.+++. ..+..+...+..+.|+|||+.||... ++.
T Consensus        56 ~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~  133 (470)
T d2bgra1          56 TFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL-ITEERIPNNTQWVTWSPVGHKLAYVW-NND  133 (470)
T ss_dssp             TTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE-CCSSCCCTTEEEEEECSSTTCEEEEE-TTE
T ss_pred             hhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcc-cccccCCccccccccccCcceeeEee-ccc
Confidence            34467788999988  999999874         357789999998874 45777889999999999999999864 668


Q ss_pred             EEEEEcCCCeEEEeEEecc-----------------cCCceeeEEEecCCCEEEEEeCCCC-EEEEEc------------
Q psy7482          78 IAIFRVGSWQLEKLFKKAH-----------------KGTAVNHISIHPSGKLALSVGKDKT-LRTWNL------------  127 (327)
Q Consensus        78 i~iw~~~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~------------  127 (327)
                      +.+|+..+++..+....+.                 .+. ...+.|+|||++|+....|.. +..|.+            
T Consensus       134 l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~-~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~  212 (470)
T d2bgra1         134 IYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA-YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPK  212 (470)
T ss_dssp             EEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS-SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCE
T ss_pred             ceEEECCCCceeeeeeccCCCcccccccceeeeeeecCC-ccccEECCCCCccceeEecCCcCceEEEEeeccCCCCCCe
Confidence            9999998887665431111                 112 456889999999998875433 333332            


Q ss_pred             -----------------------CCCceeeeeeccc------cCccccceEEEEEccCCcEEEeec---CC--eEEEE--
Q psy7482         128 -----------------------VKGRSAYITNLSS------YGVGFENLDSVVWSPEGLLYAIPI---QN--KAVVF--  171 (327)
Q Consensus       128 -----------------------~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~~~~---~~--~i~i~--  171 (327)
                                             ..+..........      .......+..+.|.+++.+++...   .+  .+.++  
T Consensus       213 ~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~  292 (470)
T d2bgra1         213 TVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDY  292 (470)
T ss_dssp             EEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEE
T ss_pred             eeeeccccccccCCcceEEEEECCCcceeeeccccccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEe
Confidence                                   2111110000000      000112246788888887666542   11  23344  


Q ss_pred             EecCCceeeEec-------C-------CCceeEEEeecCc-eEEEeCCCCcEEEE--EcCCCceeEEeeecccceEEEEE
Q psy7482         172 SVEKAGVLQTLK-------S-------ESKVHSVCFLNET-TVCTGNEESAITAY--NLTDGSHLWQIKASASRIKGLVF  234 (327)
Q Consensus       172 d~~~~~~~~~~~-------~-------~~~i~~~~~~~~~-~l~~~~~d~~i~i~--d~~~~~~~~~~~~~~~~v~~~~~  234 (327)
                      |..++.......       .       ........+.+++ .++.+..+|..++|  +...+ ....+..+...|..+..
T Consensus       293 d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~-~~~~lt~g~~~v~~~~~  371 (470)
T d2bgra1         293 DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK-DCTFITKGTWEVIGIEA  371 (470)
T ss_dssp             ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS-CCEESCCSSSCEEEEEE
T ss_pred             cCCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEEeccCcCceeEEEeccCC-ceeeeccCCeeEEEEEE
Confidence            444444322211       1       1111222222333 35566677765555  54433 34444444555776643


Q ss_pred             EecCCCcEEEEecCCC------eEEEEEcCCCceeEEe----ecccCceEEEeeeC--cEEE-EEecC--CcEEEEEccC
Q psy7482         235 FSIPQETTVCTGNEES------AITAYNLTDGSHLWHI----KASASRIKGLASHR--NHLI-CITSA--GDLVVWELNE  299 (327)
Q Consensus       235 ~~s~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~----~~~~~~v~~~~~~~--~~l~-~~~~d--g~v~iw~~~~  299 (327)
                      .  ..+..+++++.++      .|+-.++..+.....+    ..|...+.+++|||  ++++ +.+..  -.+.+|+..+
T Consensus       372 ~--d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~  449 (470)
T d2bgra1         372 L--TSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVN  449 (470)
T ss_dssp             E--CSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTT
T ss_pred             E--CCCEEEEEEecCCCCcceEEEEEEECCCCCceeEecccccCCCCCEEEEEECCCCCEEEEEecCCCCCeEEEEECCC
Confidence            2  2333334444332      2444455554444433    36777899999999  6555 33333  3488888887


Q ss_pred             c
Q psy7482         300 D  300 (327)
Q Consensus       300 ~  300 (327)
                      +
T Consensus       450 g  450 (470)
T d2bgra1         450 D  450 (470)
T ss_dssp             T
T ss_pred             C
Confidence            7

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.56  E-value=3.2e-12  Score=103.95  Aligned_cols=224  Identities=11%  Similarity=0.025  Sum_probs=148.5

Q ss_pred             CCccEEEEEe--CCCEEEEe-cCCCeEEEEEccccccccccc-cccccEEEEEECCCCCe--EEEecCCC----------
Q psy7482          13 HTASVRSVAA--TSKLAASS-GADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSH--LISCSDDG----------   76 (327)
Q Consensus        13 h~~~v~~~~~--~~~~l~~~-~~dg~v~~w~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~--l~~~~~d~----------   76 (327)
                      |.-.......  ||++|++. ..++.|.++|+.+++....+. .+...+..++|+|+++.  ++..+.+.          
T Consensus        70 hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~  149 (441)
T d1qnia2          70 HHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDF  149 (441)
T ss_dssp             CCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCC
T ss_pred             cCCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCccccc
Confidence            4444444433  89988554 578899999999998877664 35677999999999984  44444332          


Q ss_pred             -------cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC-----------------------------
Q psy7482          77 -------SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK-----------------------------  120 (327)
Q Consensus        77 -------~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------------------------  120 (327)
                             .+..+|..+.+....+...  .. ...+.++|+|+++++.+.+.                             
T Consensus       150 ~~~~~~~~~~~iD~~t~~v~~qI~v~--~~-p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~  226 (441)
T d1qnia2         150 SLDNSYTMFTAIDAETMDVAWQVIVD--GN-LDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAV  226 (441)
T ss_dssp             CGGGEEEEEEEEETTTCSEEEEEEES--SC-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHH
T ss_pred             ccccccceEEeecCccceeeEEEecC--CC-ccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEe
Confidence                   2355788887777766322  33 78899999999998887542                             


Q ss_pred             ------------CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCcee-------
Q psy7482         121 ------------TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVL-------  179 (327)
Q Consensus       121 ------------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~-------  179 (327)
                                  .+.+++....+....++....      ...+.++|||++++++.  ++++.+||+++.+..       
T Consensus       227 ~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgks------PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~  300 (441)
T d1qnia2         227 KAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKN------PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIEL  300 (441)
T ss_dssp             HTTCCBCCTTCCCCEEECSSSCSSEEEECCBSS------CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCG
T ss_pred             cCCCEEEeCCCCcEEEEcccCCceEEEEeCCCC------ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCc
Confidence                        233333333333333333322      67899999999887764  899999998763311       


Q ss_pred             -eEe----cCCCceeEEEeecCc-eEEEeCCCCcEEEEEcCC----------CceeEEe-----eecccceEEEEEEecC
Q psy7482         180 -QTL----KSESKVHSVCFLNET-TVCTGNEESAITAYNLTD----------GSHLWQI-----KASASRIKGLVFFSIP  238 (327)
Q Consensus       180 -~~~----~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~----------~~~~~~~-----~~~~~~v~~~~~~~s~  238 (327)
                       ..+    ...-.....+|++++ .+.+...|..|..|++..          ...+..+     .+|...+.+..+  +|
T Consensus       301 ~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~--~p  378 (441)
T d1qnia2         301 RDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESR--DA  378 (441)
T ss_dssp             GGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTST--TC
T ss_pred             ceEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCcccccccc--CC
Confidence             011    112234556888884 566778999999999742          1223333     467666666677  59


Q ss_pred             CCcEEEEec
Q psy7482         239 QETTVCTGN  247 (327)
Q Consensus       239 ~~~~l~~~~  247 (327)
                      +|++|++++
T Consensus       379 dGk~l~s~~  387 (441)
T d1qnia2         379 DGKWLVVLS  387 (441)
T ss_dssp             CCCEEEEEE
T ss_pred             CCcEEEecC
Confidence            999999994

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.50  E-value=1e-10  Score=94.48  Aligned_cols=270  Identities=10%  Similarity=0.086  Sum_probs=156.1

Q ss_pred             EEEec--CCCeEEEEEcc--ccccc--ccc-ccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC-CeEEEeEEecccC
Q psy7482          27 AASSG--ADETVVLYDMV--KRKQS--GAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-WQLEKLFKKAHKG   98 (327)
Q Consensus        27 l~~~~--~dg~v~~w~~~--~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~   98 (327)
                      |+.|+  ..+.|..+.+.  +++..  ... ......+.-|+|+|+++.|+++.. +.+..|.+.. +............
T Consensus         5 l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~   83 (365)
T d1jofa_           5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGG   83 (365)
T ss_dssp             EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCS
T ss_pred             EEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCC
Confidence            45554  35567665544  33321  111 123445667999999999988765 4677887753 3333322122223


Q ss_pred             CceeeEEEecCCCEEEE--Ee-CCCCEEEEEcCC-Cceeeeeecccc-----------CccccceEEEEEccCCcEEEee
Q psy7482          99 TAVNHISIHPSGKLALS--VG-KDKTLRTWNLVK-GRSAYITNLSSY-----------GVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        99 ~~v~~~~~~~~~~~l~~--~~-~dg~i~iwd~~~-~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      . ...+.++++++.++.  +. ..+.+..+.+.. +...........           ......+.++.|+|+|++++++
T Consensus        84 ~-p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~  162 (365)
T d1jofa_          84 H-PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA  162 (365)
T ss_dssp             S-GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred             C-cEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEe
Confidence            3 667888888875433  22 235555554322 111111111000           0011127899999999988887


Q ss_pred             c--CCeEEEEEecCCceee---Ee---cCCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEee----------
Q psy7482         164 I--QNKAVVFSVEKAGVLQ---TL---KSESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIK----------  223 (327)
Q Consensus       164 ~--~~~i~i~d~~~~~~~~---~~---~~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~----------  223 (327)
                      .  .+.|.+|+......+.   ..   ........++|+|+ .++ ++.-.+++|.+|++...+......          
T Consensus       163 d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~  242 (365)
T d1jofa_         163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPG  242 (365)
T ss_dssp             ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTT
T ss_pred             eCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeecccccc
Confidence            6  5688888865433222   11   13567899999999 444 566678999999987654322111          


Q ss_pred             ---------ecccceEEEEEEecCCCcEEEEecC------CCeEEEEEcCCCceeEEe------ecccCceEEEeeeC--
Q psy7482         224 ---------ASASRIKGLVFFSIPQETTVCTGNE------ESAITAYNLTDGSHLWHI------KASASRIKGLASHR--  280 (327)
Q Consensus       224 ---------~~~~~v~~~~~~~s~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~------~~~~~~v~~~~~~~--  280 (327)
                               .+......+.+  +|+|++|+++..      ...|..|++.....+...      .......++++++|  
T Consensus       243 ~~~~~~~~~~~~~~~~~i~~--spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~  320 (365)
T d1jofa_         243 IPDRDPETGKGLYRADVCAL--TFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWS  320 (365)
T ss_dssp             CCCBCTTTSSBSEEEEEEEE--CTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTC
T ss_pred             ccccccccccccCCccceEE--CCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCC
Confidence                     01122445677  599999988642      234778887654322211      12234567888986  


Q ss_pred             -cEEEEE-ecCCcEEEEEccCc
Q psy7482         281 -NHLICI-TSAGDLVVWELNED  300 (327)
Q Consensus       281 -~~l~~~-~~dg~v~iw~~~~~  300 (327)
                       ++|+++ ..++.|.+|+++..
T Consensus       321 G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         321 DEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             TTEEEEECSSSCEEEEEEEETT
T ss_pred             CCEEEEEeCCCCeEEEEEEeCC
Confidence             655555 56788999998776

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=3.9e-10  Score=86.92  Aligned_cols=235  Identities=10%  Similarity=0.050  Sum_probs=143.3

Q ss_pred             eEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC---CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC
Q psy7482          35 TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK  111 (327)
Q Consensus        35 ~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  111 (327)
                      .|.|-|.. |.....+..+...+...+|||||+.||.....   ..+.+.+...+.....  ..+... .....|+|+|+
T Consensus        20 ~l~i~d~d-G~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~spdg~   95 (269)
T d2hqsa1          20 ELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV--ASFPRH-NGAPAFSPDGS   95 (269)
T ss_dssp             EEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE--ECCSSC-EEEEEECTTSS
T ss_pred             EEEEEcCC-CCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEE--eeeecc-cccceecCCCC
Confidence            57777865 54445555567778899999999999865443   2466667666554433  344555 88899999999


Q ss_pred             EEEEEeC-CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC--eEEEEEecCCceeeEecCCC
Q psy7482         112 LALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN--KAVVFSVEKAGVLQTLKSES  186 (327)
Q Consensus       112 ~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d~~~~~~~~~~~~~~  186 (327)
                      .++.... ++...++................    .......+++++..+....  ++  .+...+...+..........
T Consensus        96 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~  171 (269)
T d2hqsa1          96 KLAFALSKTGSLNLYVMDLASGQIRQVTDGR----SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGS  171 (269)
T ss_dssp             EEEEEECTTSSCEEEEEETTTCCEEECCCCS----SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSS
T ss_pred             eeeEeeecCCccceeecccccccceeeeecc----ccccccccccccccceecccccCCceEeeeecccccceeeecccc
Confidence            8887654 33333333322222111111111    1144556777776554443  44  56666766665554444667


Q ss_pred             ceeEEEeecC-ceEEE-eCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecC---CCeEEEEEcCCCc
Q psy7482         187 KVHSVCFLNE-TTVCT-GNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNE---ESAITAYNLTDGS  261 (327)
Q Consensus       187 ~i~~~~~~~~-~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~---d~~i~i~d~~~~~  261 (327)
                      ......|+|+ ..++. ....+...+|.............+........|  ||||+.|+..+.   ...|+++++..+.
T Consensus       172 ~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~p~~--SPDG~~i~f~s~~~~~~~l~~~~~dg~~  249 (269)
T d2hqsa1         172 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSL--APNGTMVIYSSSQGMGSVLNLVSTDGRF  249 (269)
T ss_dssp             EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEE--CTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred             cccccccccccceeEEEeecCCceeeeEeecccccceEeecCccccceEE--CCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence            7788899998 44444 344444444443332222333344555667788  599999875443   3568999987665


Q ss_pred             eeEEeecccCceEEEeeeC
Q psy7482         262 HLWHIKASASRIKGLASHR  280 (327)
Q Consensus       262 ~~~~~~~~~~~v~~~~~~~  280 (327)
                      . ..+....+.+...+|+|
T Consensus       250 ~-~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         250 K-ARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             E-EECCCSSSEEEEEEECC
T ss_pred             E-EEEeCCCCcEEeEEeCC
Confidence            4 55666677888889998

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.44  E-value=1.2e-10  Score=89.49  Aligned_cols=233  Identities=8%  Similarity=0.037  Sum_probs=143.3

Q ss_pred             ccEEEEEECCCCCeEEEe-cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee
Q psy7482          55 GTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA  133 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  133 (327)
                      .....+++.++|+..++. +..+.+..++.......... ...... ...++++++++++++....+.+++++..+....
T Consensus        14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~-p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~   91 (260)
T d1rwia_          14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP-FNGLYQ-PQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTV   91 (260)
T ss_dssp             CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECC-CCSCCS-CCCEEECTTCCEEEEETTTEEEEECTTCSCCEE
T ss_pred             CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEec-cCCccC-ceEEEEcCCCCEEEeeeeeceeeeeeeccceee
Confidence            346899999999966654 45567777665443322221 222233 678999999987777666666666654444332


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeE-ecCCCceeEEEeecC-ceEEEeCCCCcEEE
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQT-LKSESKVHSVCFLNE-TTVCTGNEESAITA  210 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~-~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i  210 (327)
                        .....    ...+..+++.++++++++.. +..+..++......... .........++++++ ..+++...++.|..
T Consensus        92 --~~~~~----~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~  165 (260)
T d1rwia_          92 --LPFDG----LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK  165 (260)
T ss_dssp             --CCCCS----CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEE
T ss_pred             --eeeee----eeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccc
Confidence              21211    12378999999998877765 66777776654332221 123355678999988 66666677888999


Q ss_pred             EEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEec
Q psy7482         211 YNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITS  288 (327)
Q Consensus       211 ~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~  288 (327)
                      +|...................+++  +++|.++++....+.|..++.............-....+|++++  .++++-..
T Consensus       166 ~d~~~~~~~~~~~~~~~~p~gi~~--d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~  243 (260)
T d1rwia_         166 LEAESNNQVVLPFTDITAPWGIAV--DEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG  243 (260)
T ss_dssp             ECTTTCCEEECCCSSCCSEEEEEE--CTTCCEEEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGG
T ss_pred             cccccceeeeeeccccCCCcccee--eeeeeeeeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECC
Confidence            997655433322234455678888  48899888888888898887654432222122234567888887  55555455


Q ss_pred             CCcEEEEEc
Q psy7482         289 AGDLVVWEL  297 (327)
Q Consensus       289 dg~v~iw~~  297 (327)
                      ++.|+.++.
T Consensus       244 ~~rI~~i~~  252 (260)
T d1rwia_         244 NDRVVKLTS  252 (260)
T ss_dssp             GTEEEEECC
T ss_pred             CCEEEEEeC
Confidence            555554443

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.43  E-value=6.1e-10  Score=87.43  Aligned_cols=224  Identities=9%  Similarity=0.088  Sum_probs=152.3

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCcee--
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA--  133 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--  133 (327)
                      .+..+++.|||+++++...+++|..|+... +.. .+ ...... +.+++|.++|+++++...++.+..++.......  
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g-~~~-~~-~~~~~~-~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQ-IH-ATVEGK-VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEE-EE-EECSSE-EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCC-CEE-EE-EcCCCC-cceEEEcCCCCeEEEecCCceEEEEEeccccccee
Confidence            478899999999999999999988888653 322 23 233444 899999999999888888888988887543322  


Q ss_pred             eeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec-----------CCCceeEEEeecCceEEE
Q psy7482         134 YITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK-----------SESKVHSVCFLNETTVCT  201 (327)
Q Consensus       134 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~-----------~~~~i~~~~~~~~~~l~~  201 (327)
                      .......    ......+.+.++++++++.. ++.+..+|...+.......           .......+.++.+.++++
T Consensus       105 ~~~~~~~----~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~  180 (302)
T d2p4oa1         105 TLLTLPD----AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS  180 (302)
T ss_dssp             EEEECTT----CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE
T ss_pred             eccccCC----ccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeee
Confidence            2222211    22378999999999888776 7888888887665332221           123456777776677888


Q ss_pred             eCCCCcEEEEEcCCCceeEEe--eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc-eeEEeecccCceEEEee
Q psy7482         202 GNEESAITAYNLTDGSHLWQI--KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS-HLWHIKASASRIKGLAS  278 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~  278 (327)
                      .+..+.|..++..........  .........+++  +++|+++++...++.|..++..... .+......-...++++|
T Consensus       181 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~--d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vaf  258 (302)
T d2p4oa1         181 NTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAF--DVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAF  258 (302)
T ss_dssp             ETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEE--BTTCCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEE
T ss_pred             cCCCCeEEeccccccccccccccccCCCCCcceEE--CCCCCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEEEE
Confidence            889999999998765432221  122334567888  4899988888888999999865332 22333333446789999


Q ss_pred             e---C--cEEEEEecC
Q psy7482         279 H---R--NHLICITSA  289 (327)
Q Consensus       279 ~---~--~~l~~~~~d  289 (327)
                      .   +  +.|+.++..
T Consensus       259 g~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         259 GQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             CCSTTTTTEEEEEECT
T ss_pred             cCCCCCCCEEEEECCC
Confidence            5   3  455554433

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.40  E-value=2.6e-10  Score=87.49  Aligned_cols=241  Identities=9%  Similarity=0.043  Sum_probs=147.6

Q ss_pred             EeeeeccCC--ccEEEEEe--CCCEEEEe-cCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEE
Q psy7482           6 QTFVTHSHT--ASVRSVAA--TSKLAASS-GADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI   80 (327)
Q Consensus         6 ~~~~~~~h~--~~v~~~~~--~~~~l~~~-~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i   80 (327)
                      +.+.+.++.  ..-..+++  +|++.++. +..+.+..++............-......+++.++++++++....+.+++
T Consensus         3 ~~~~~~~~~~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~   82 (260)
T d1rwia_           3 TVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTL   82 (260)
T ss_dssp             EECCCCSCCSCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEE
T ss_pred             eEEecccCCCcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeee
Confidence            344444543  44578888  67765554 55577777765443222221121234567899999988877777766766


Q ss_pred             EEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE
Q psy7482          81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY  160 (327)
Q Consensus        81 w~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  160 (327)
                      ++-.+.......  ..... ...+++.++++++++-..+..+..++...... .......    ......++++|+++++
T Consensus        83 ~~~~~~~~~~~~--~~~~~-p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~-~~~~~~~----~~~p~~i~~~~~g~~~  154 (260)
T d1rwia_          83 AAGSNNQTVLPF--DGLNY-PEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-TVLPFTG----LNDPDGVAVDNSGNVY  154 (260)
T ss_dssp             CTTCSCCEECCC--CSCCS-EEEEEECTTCCEEEEEGGGTEEEEECTTCSSC-EECCCCS----CCSCCEEEECTTCCEE
T ss_pred             eeeccceeeeee--eeeee-cccccccccceeEeecccccccccccccccee-eeeeecc----cCCcceeeecCCCCEe
Confidence            655444433222  22334 78999999998777766666677777654332 2221111    1236789999999877


Q ss_pred             Eeec-CCeEEEEEecCCceeeEe-cCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEe-eecccceEEEEEEe
Q psy7482         161 AIPI-QNKAVVFSVEKAGVLQTL-KSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQI-KASASRIKGLVFFS  236 (327)
Q Consensus       161 ~~~~-~~~i~i~d~~~~~~~~~~-~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~  236 (327)
                      ++.. ++.|..+|.......... ..-.....+++.++ .++++....+.|..++...... ..+ ...-.....|++. 
T Consensus       155 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~~~~~~P~~i~~d-  232 (260)
T d1rwia_         155 VTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPFTGLNTPLAVAVD-  232 (260)
T ss_dssp             EEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECCCCSCCCEEEEEEC-
T ss_pred             eeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE-EEEccCCCCCeEEEEEe-
Confidence            7765 788999987755433322 24466789999988 5566666778888887654332 222 2222456788884 


Q ss_pred             cCCCcEEEEecCCCeEEEEEc
Q psy7482         237 IPQETTVCTGNEESAITAYNL  257 (327)
Q Consensus       237 s~~~~~l~~~~~d~~i~i~d~  257 (327)
                       ++|.++++-..+++|+.++.
T Consensus       233 -~~g~l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         233 -SDRTVYVADRGNDRVVKLTS  252 (260)
T ss_dssp             -TTCCEEEEEGGGTEEEEECC
T ss_pred             -CCCCEEEEECCCCEEEEEeC
Confidence             78887777666677766553

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.40  E-value=2.1e-09  Score=84.67  Aligned_cols=239  Identities=10%  Similarity=0.110  Sum_probs=157.8

Q ss_pred             EEEEEECCCCCeEEEecC-------CCcEEEEEcCCCeEEEeEEecc----cCCceeeEEEecCCCEEEEEeCCCCEEEE
Q psy7482          57 ITCLKFTPEGSHLISCSD-------DGSIAIFRVGSWQLEKLFKKAH----KGTAVNHISIHPSGKLALSVGKDKTLRTW  125 (327)
Q Consensus        57 v~~~~~~~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  125 (327)
                      ...++|.|+|+++++...       ++.|..||..+++..... ...    ... ...+.|.++++.++++...+.+..+
T Consensus        20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~-~~~~~~~~g~-P~Gl~~~~dg~~l~vad~~~~i~~~   97 (314)
T d1pjxa_          20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVIC-KPEVNGYGGI-PAGCQCDRDANQLFVADMRLGLLVV   97 (314)
T ss_dssp             CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEE-CCEETTEECC-EEEEEECSSSSEEEEEETTTEEEEE
T ss_pred             CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEE-CCccccCCCc-ceeEEEeCCCCEEEEEECCCeEEEE
Confidence            456789999997776433       467888888877654433 211    122 5679999999988888777778888


Q ss_pred             EcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec----------------CCeEEEEEecCCceeeEecCCCcee
Q psy7482         126 NLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----------------QNKAVVFSVEKAGVLQTLKSESKVH  189 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------------~~~i~i~d~~~~~~~~~~~~~~~i~  189 (327)
                      +...+.... .............+.+++.++|.+.++..                .|.+..++. .++.......-...+
T Consensus        98 ~~~g~~~~~-~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~-dg~~~~~~~~~~~pN  175 (314)
T d1pjxa_          98 QTDGTFEEI-AKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT-DGQMIQVDTAFQFPN  175 (314)
T ss_dssp             ETTSCEEEC-CSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT-TSCEEEEEEEESSEE
T ss_pred             eCCCcEEEE-EeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEee-cCceeEeeCCcceee
Confidence            976543322 11111111122367899999999887642                134444443 234333333334457


Q ss_pred             EEEeecC-c-----eEEEeCCCCcEEEEEcCCCceeEE------eee-cccceEEEEEEecCCCcEEEEecCCCeEEEEE
Q psy7482         190 SVCFLNE-T-----TVCTGNEESAITAYNLTDGSHLWQ------IKA-SASRIKGLVFFSIPQETTVCTGNEESAITAYN  256 (327)
Q Consensus       190 ~~~~~~~-~-----~l~~~~~d~~i~i~d~~~~~~~~~------~~~-~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d  256 (327)
                      .++|+|+ .     ++++-+..+.|..||+.....+..      +.. .......+++  +.+|++.++....+.|.+||
T Consensus       176 Gi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiav--D~~GnlyVa~~~~g~I~~~d  253 (314)
T d1pjxa_         176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF--DEDNNLLVANWGSSHIEVFG  253 (314)
T ss_dssp             EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE--BTTCCEEEEEETTTEEEEEC
T ss_pred             eeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEE--ecCCcEEEEEcCCCEEEEEe
Confidence            8899886 2     455667888999998764433221      111 1223457888  48899888877789999999


Q ss_pred             cCCCceeEEeecccCceEEEeeeC---cEEEEEecCCcEEEEEccCcc
Q psy7482         257 LTDGSHLWHIKASASRIKGLASHR---NHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       257 ~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      .+.++.+..+..+....++++|.|   .++++.+.+|.|...++....
T Consensus       254 p~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G  301 (314)
T d1pjxa_         254 PDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG  301 (314)
T ss_dssp             TTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred             CCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCCC
Confidence            888887777777667889999988   366777778888888876653

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.35  E-value=1.2e-09  Score=85.81  Aligned_cols=228  Identities=11%  Similarity=0.075  Sum_probs=147.5

Q ss_pred             cEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC--eEEEe
Q psy7482          16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW--QLEKL   91 (327)
Q Consensus        16 ~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~--~~~~~   91 (327)
                      .+..+++  ||+++++...+++|..|+.. ++ ...+......+.+++|.++|+++++...++.+..|+....  .....
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~  106 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPD-GN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL  106 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCC-CC-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeec
Confidence            4777888  99999999999999988854 33 2334456678999999999999888888888888876542  33222


Q ss_pred             EEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc-----CccccceEEEEEccCCcEEEeec-C
Q psy7482          92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY-----GVGFENLDSVVWSPEGLLYAIPI-Q  165 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~-~  165 (327)
                      ........ .+.+.+.++++++++.+.++.+..+|...+...........     .........+.++.+ .++.+.. .
T Consensus       107 ~~~~~~~~-~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~-~l~~~~~~~  184 (302)
T d2p4oa1         107 LTLPDAIF-LNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGN-FLYVSNTEK  184 (302)
T ss_dssp             EECTTCSC-EEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETT-EEEEEETTT
T ss_pred             cccCCccc-cceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCC-ceeeecCCC
Confidence            21223333 88999999998888888888888888876653322211100     111123556666543 2333333 8


Q ss_pred             CeEEEEEecCCceee---EecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCce--eEEeeecccceEEEEEEe-cC
Q psy7482         166 NKAVVFSVEKAGVLQ---TLKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSH--LWQIKASASRIKGLVFFS-IP  238 (327)
Q Consensus       166 ~~i~i~d~~~~~~~~---~~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~-s~  238 (327)
                      +.|..++........   .+........++++++ .++++...++.|..++.. ++.  +......-...++++|.. ++
T Consensus       185 ~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~-G~~~~~~~~~~~~~~pt~vafg~~~~  263 (302)
T d2p4oa1         185 MLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEG  263 (302)
T ss_dssp             TEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTT
T ss_pred             CeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCC-CCEEEEEecCCCCCCceEEEEcCCCC
Confidence            899988876654332   2224455678999999 555666678889998765 333  222233334578889842 15


Q ss_pred             CCcEEEEecC
Q psy7482         239 QETTVCTGNE  248 (327)
Q Consensus       239 ~~~~l~~~~~  248 (327)
                      |++.|+.++.
T Consensus       264 D~~~Lyvtt~  273 (302)
T d2p4oa1         264 DCTAIYVVTN  273 (302)
T ss_dssp             TTTEEEEEEC
T ss_pred             CCCEEEEECC
Confidence            6776765443

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.34  E-value=2.6e-08  Score=76.91  Aligned_cols=247  Identities=11%  Similarity=0.125  Sum_probs=162.6

Q ss_pred             eEEEeeeeccCC----ccEEEEEe--CCCEEEEecCCCeEEEEEcccccccccccc------ccccEEEEEECCC-CCeE
Q psy7482           3 TLTQTFVTHSHT----ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ------HEGTITCLKFTPE-GSHL   69 (327)
Q Consensus         3 ~~~~~~~~~~h~----~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~------~~~~v~~~~~~~~-~~~l   69 (327)
                      .+.++|--+|..    ..-..+++  +++++++-..++.|++||.+ ++.+..+..      .......+++.++ +..+
T Consensus         7 ~~~~~~G~~G~~~g~f~~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~   85 (279)
T d1q7fa_           7 IYHCKFGEFGVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDII   85 (279)
T ss_dssp             CEEEEECCBSSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEE
T ss_pred             EEEeecCCCcCCCCeECCccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccc
Confidence            455566444432    34678888  78888887778899999964 555544421      1223445565554 3344


Q ss_pred             EE-ecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccce
Q psy7482          70 IS-CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENL  148 (327)
Q Consensus        70 ~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v  148 (327)
                      ++ .+.++.|..++. .++....+....... ...+++.+++.++++....+.+.+++.. ++.+..+....   +....
T Consensus        86 ~~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~-p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~---~~~~~  159 (279)
T d1q7fa_          86 VTERSPTHQIQIYNQ-YGQFVRKFGATILQH-PRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSK---HLEFP  159 (279)
T ss_dssp             EEECGGGCEEEEECT-TSCEEEEECTTTCSC-EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTT---TCSSE
T ss_pred             eeccCCccccccccc-cccceeecCCCcccc-cceeccccCCcEEEEeeccceeeEeccC-Cceeecccccc---ccccc
Confidence            43 344567777765 466666663333444 7889999999888887777888888854 55544433222   23447


Q ss_pred             EEEEEccCCcEEEeec-CCeEEEEEecCCceeeEecC---CCceeEEEeecCc-eEEEeC-CCCcEEEEEcCCCceeEEe
Q psy7482         149 DSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLKS---ESKVHSVCFLNET-TVCTGN-EESAITAYNLTDGSHLWQI  222 (327)
Q Consensus       149 ~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~~---~~~i~~~~~~~~~-~l~~~~-~d~~i~i~d~~~~~~~~~~  222 (327)
                      ..+++.++++++++.. .+.|++||. +++.+..+..   ......+++.+++ .+++-. .++.|.+|+ .+++.+.++
T Consensus       160 ~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~  237 (279)
T d1q7fa_         160 NGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISAL  237 (279)
T ss_dssp             EEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEE
T ss_pred             ceeeeccceeEEeeeccccceeeeec-CCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEE
Confidence            8899999998887776 789999986 4666777652   3457899999984 444433 345699998 468777776


Q ss_pred             eec--ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         223 KAS--ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       223 ~~~--~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                      ...  ......+++.  ++|.++++ +.++.|++|......
T Consensus       238 ~~~~~~~~p~~vav~--~dG~l~V~-~~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         238 ESKVKHAQCFDVALM--DDGSVVLA-SKDYRLYIYRYVQLA  275 (279)
T ss_dssp             EESSCCSCEEEEEEE--TTTEEEEE-ETTTEEEEEECSCCC
T ss_pred             eCCCCCCCEeEEEEe--CCCcEEEE-eCCCeEEEEEeeeec
Confidence            433  2346788884  88876554 568999999977654

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.33  E-value=7.1e-09  Score=81.53  Aligned_cols=233  Identities=11%  Similarity=0.121  Sum_probs=147.9

Q ss_pred             EEEEEe--CCCEEEEecC-------CCeEEEEEcccccccccccc----ccccEEEEEECCCCCeEEEecCCCcEEEEEc
Q psy7482          17 VRSVAA--TSKLAASSGA-------DETVVLYDMVKRKQSGALMQ----HEGTITCLKFTPEGSHLISCSDDGSIAIFRV   83 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~~-------dg~v~~w~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~   83 (327)
                      ...++|  +|++.++...       +|+|..||..++........    .......++|.++++.|+++...+.+...+.
T Consensus        20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~~   99 (314)
T d1pjxa_          20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQT   99 (314)
T ss_dssp             CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEET
T ss_pred             CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEeC
Confidence            445677  7887766433       46788899887654332221    1223578999999998888877777888887


Q ss_pred             CCCeEEEeEEecccCC---ceeeEEEecCCCEEEEEeC---------------CCCEEEEEcCCCceeeeeeccccCccc
Q psy7482          84 GSWQLEKLFKKAHKGT---AVNHISIHPSGKLALSVGK---------------DKTLRTWNLVKGRSAYITNLSSYGVGF  145 (327)
Q Consensus        84 ~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~  145 (327)
                      ......... ....+.   ..+.+++.++|++.++-..               .|.|..++.+ ++........      
T Consensus       100 ~g~~~~~~~-~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~~~~------  171 (314)
T d1pjxa_         100 DGTFEEIAK-KDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF------  171 (314)
T ss_dssp             TSCEEECCS-BCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE------
T ss_pred             CCcEEEEEe-ccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEeeCCc------
Confidence            654432221 222211   1577999999987776432               2334444432 3332222111      


Q ss_pred             cceEEEEEccCCc----EEEee-c-CCeEEEEEecCCceee------Eec--CCCceeEEEeecC-ceEEEeCCCCcEEE
Q psy7482         146 ENLDSVVWSPEGL----LYAIP-I-QNKAVVFSVEKAGVLQ------TLK--SESKVHSVCFLNE-TTVCTGNEESAITA  210 (327)
Q Consensus       146 ~~v~~~~~~~~~~----~l~~~-~-~~~i~i~d~~~~~~~~------~~~--~~~~i~~~~~~~~-~~l~~~~~d~~i~i  210 (327)
                      ...+.++|+|++.    .|.++ + .+.|..||+.....+.      .+.  .......+++..+ +++++....+.|.+
T Consensus       172 ~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~  251 (314)
T d1pjxa_         172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV  251 (314)
T ss_dssp             SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred             ceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEE
Confidence            1256889988764    34444 4 7899999876543322      111  2234678999888 45555567889999


Q ss_pred             EEcCCCceeEEeeecccceEEEEEEecCCCc-EEEEecCCCeEEEEEcCC
Q psy7482         211 YNLTDGSHLWQIKASASRIKGLVFFSIPQET-TVCTGNEESAITAYNLTD  259 (327)
Q Consensus       211 ~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~-~l~~~~~d~~i~i~d~~~  259 (327)
                      ||.+.++.+..+.......++++|  .++++ ++++.+.++.|..+++..
T Consensus       252 ~dp~~g~~~~~i~~p~~~~t~~af--g~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         252 FGPDGGQPKMRIRCPFEKPSNLHF--KPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             ECTTCBSCSEEEECSSSCEEEEEE--CTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EeCCCCEEEEEEECCCCCEEEEEE--eCCCCEEEEEECCCCcEEEEECCC
Confidence            998888777777766667889999  48886 556677788888888653

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.31  E-value=1.4e-08  Score=80.06  Aligned_cols=223  Identities=10%  Similarity=0.123  Sum_probs=140.8

Q ss_pred             ccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC----CCcEEEEEcCCCeE
Q psy7482          15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD----DGSIAIFRVGSWQL   88 (327)
Q Consensus        15 ~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~iw~~~~~~~   88 (327)
                      ..+..++|  +|++.++-...+.|..|+...++....+.........+++.++|+++++...    .+.+...+......
T Consensus        40 ~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~  119 (319)
T d2dg1a1          40 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNL  119 (319)
T ss_dssp             CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSC
T ss_pred             cCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCcee
Confidence            34567888  7888888778899999998776655555555567889999999988776543    23344445554444


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEe
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAI  162 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  162 (327)
                      .............+.+.+.++|++.++...      .+.+..++...+........-      ...+.++|+|+++.|.+
T Consensus       120 ~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~------~~pnGia~s~dg~~lyv  193 (319)
T d2dg1a1         120 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI------SVANGIALSTDEKVLWV  193 (319)
T ss_dssp             EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE------SSEEEEEECTTSSEEEE
T ss_pred             eeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeecc------ceeeeeeeccccceEEE
Confidence            333311222223788999999986665432      123555554433222221111      12678999999986655


Q ss_pred             e-c-CCeEEEEEecCCc-eeeE--------ecCCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeec-----
Q psy7482         163 P-I-QNKAVVFSVEKAG-VLQT--------LKSESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKAS-----  225 (327)
Q Consensus       163 ~-~-~~~i~i~d~~~~~-~~~~--------~~~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-----  225 (327)
                      + + .+.|..||+.... ....        .........+++.++ ++.++....+.|.+||. +++.+.++...     
T Consensus       194 ad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~  272 (319)
T d2dg1a1         194 TETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEG  272 (319)
T ss_dssp             EEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGT
T ss_pred             ecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCC
Confidence            5 3 7899999986431 1111        112344678999988 55566667899999995 68888777532     


Q ss_pred             -ccceEEEEEEecCCCcEEEEe
Q psy7482         226 -ASRIKGLVFFSIPQETTVCTG  246 (327)
Q Consensus       226 -~~~v~~~~~~~s~~~~~l~~~  246 (327)
                       ...+++++|.  +++..+++.
T Consensus       273 ~~~~~~~~~~~--~~~~~~~~t  292 (319)
T d2dg1a1         273 HMLRSTHPQFI--PGTNQLIIC  292 (319)
T ss_dssp             CSCBCCEEEEC--TTSCEEEEE
T ss_pred             cCceeeeEEEe--CCCCEEEEE
Confidence             3357788884  666555544

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.30  E-value=1.7e-08  Score=79.58  Aligned_cols=225  Identities=14%  Similarity=0.127  Sum_probs=145.8

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC----CCCEEEEEcCCC
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK----DKTLRTWNLVKG  130 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~  130 (327)
                      ..+..++|.++|++.++-...+.|..|+...++....+ ...... ...+++.++|+++++...    .+.+...+...+
T Consensus        40 ~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~-~~~~~~-p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~  117 (319)
T d2dg1a1          40 LQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-VSHKAN-PAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGD  117 (319)
T ss_dssp             CCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-ECSSSS-EEEEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred             cCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEE-eCCCCC-eeEEEECCCCCEEEEecCCCccceeEEEEcCCCc
Confidence            34578999999998777778899999998876655555 444444 889999999987776543    233555555444


Q ss_pred             ceeeeeeccccCccccceEEEEEccCCcEEEeecC-------CeEEEEEecCCceeeEecCCCceeEEEeecC-ce-EEE
Q psy7482         131 RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ-------NKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-TT-VCT  201 (327)
Q Consensus       131 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~~-l~~  201 (327)
                      ..........   .......+.+.++|+++++...       +.+..++...+........-...+.++|+|+ +. +++
T Consensus       118 ~~~~~~~~~~---~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyva  194 (319)
T d2dg1a1         118 NLQDIIEDLS---TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVT  194 (319)
T ss_dssp             SCEEEECSSS---SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred             eeeeeccCCC---cccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEe
Confidence            4332221111   1233788999999998776532       3455555443333333333345678999998 44 466


Q ss_pred             eCCCCcEEEEEcCCCc-eeEEe-------eecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc----
Q psy7482         202 GNEESAITAYNLTDGS-HLWQI-------KASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS----  269 (327)
Q Consensus       202 ~~~d~~i~i~d~~~~~-~~~~~-------~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----  269 (327)
                      -+..+.|..|++.... .....       .........+++  +.+|++.++....+.|.+||. +++.+.++...    
T Consensus       195 d~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~v--D~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~  271 (319)
T d2dg1a1         195 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCI--DSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDE  271 (319)
T ss_dssp             EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEE--BTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGG
T ss_pred             cccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeE--cCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCC
Confidence            6778899999986432 11111       111123456888  489998888888899999994 78888777633    


Q ss_pred             --cCceEEEeeeC--cEEEEEe
Q psy7482         270 --ASRIKGLASHR--NHLICIT  287 (327)
Q Consensus       270 --~~~v~~~~~~~--~~l~~~~  287 (327)
                        ...+++++|.+  ..+++..
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         272 GHMLRSTHPQFIPGTNQLIICS  293 (319)
T ss_dssp             TCSCBCCEEEECTTSCEEEEEE
T ss_pred             CcCceeeeEEEeCCCCEEEEEc
Confidence              33578999988  4444443

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.30  E-value=4.6e-09  Score=84.58  Aligned_cols=243  Identities=9%  Similarity=0.070  Sum_probs=138.9

Q ss_pred             CccEEEEEe--CCCEEEEecCCCeEEEEEccccccccccc--cccccEEEEEECCCCCe--EEEec-CCCcEEEEEcCC-
Q psy7482          14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSH--LISCS-DDGSIAIFRVGS-   85 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~--l~~~~-~d~~i~iw~~~~-   85 (327)
                      ...+.-|++  ++++|+++. .+.+..|.+.....+....  ........+.++++++.  ++++. ..+++..+.+.. 
T Consensus        39 ~~~~s~la~s~d~~~ly~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~  117 (365)
T d1jofa_          39 DEPISWMTFDHERKNIYGAA-MKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF  117 (365)
T ss_dssp             TCCCSEEEECTTSSEEEEEE-BTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred             CCCCCEEEEcCCCCEEEEEe-CCcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC
Confidence            334455777  888888775 4567888766432221111  12233456778888874  33332 245555554421 


Q ss_pred             ------------CeE---EEeEEecccCCceeeEEEecCCCEEEEEeC-CCCEEEEEcCCC-ceeeeeeccccCccccce
Q psy7482          86 ------------WQL---EKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKG-RSAYITNLSSYGVGFENL  148 (327)
Q Consensus        86 ------------~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~v  148 (327)
                                  +..   ........... +.++.|+|+|++++++.. ...|.+|+.... .....-...... .....
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~h-~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~-~g~gP  195 (365)
T d1jofa_         118 AGYGNVFSVSETGKLEKNVQNYEYQENTG-IHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD-PGDHP  195 (365)
T ss_dssp             CCEEEEEEECTTCCEEEEEEEEECCTTCC-EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS-TTCCE
T ss_pred             CCcceeEeeeecceecCcccCcccCCCCc-ceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecC-CCCce
Confidence                        111   11110111223 789999999999888864 346888876543 222221111111 12348


Q ss_pred             EEEEEccCCcEEEeec--CCeEEEEEecCCceeeE-----ec---------------CCCceeEEEeecC-ceEEEeC--
Q psy7482         149 DSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQT-----LK---------------SESKVHSVCFLNE-TTVCTGN--  203 (327)
Q Consensus       149 ~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~~-----~~---------------~~~~i~~~~~~~~-~~l~~~~--  203 (327)
                      +.++|+|+++++.+..  ++.|.+|+...++....     ..               .......+.++|+ .+++++.  
T Consensus       196 r~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~  275 (365)
T d1jofa_         196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA  275 (365)
T ss_dssp             EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred             EEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEccc
Confidence            8999999999876664  89999999876543221     11               1123567889999 5665542  


Q ss_pred             ----CCCcEEEEEcCCCceeEEe------eecccceEEEEEEecC-CCcEEEEe-cCCCeEEEEEcCCCc
Q psy7482         204 ----EESAITAYNLTDGSHLWQI------KASASRIKGLVFFSIP-QETTVCTG-NEESAITAYNLTDGS  261 (327)
Q Consensus       204 ----~d~~i~i~d~~~~~~~~~~------~~~~~~v~~~~~~~s~-~~~~l~~~-~~d~~i~i~d~~~~~  261 (327)
                          ..+.|..|++.....+...      .........+++.  | +|++|+++ ..++.|.+|++....
T Consensus       276 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~--p~~G~~l~va~~~s~~v~v~~~~~~~  343 (365)
T d1jofa_         276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPC--PWSDEWMAITDDQEGWLEIYRWKDEF  343 (365)
T ss_dssp             SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEEC--TTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred             CCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEec--CCCCCEEEEEeCCCCeEEEEEEeCCc
Confidence                2234777877654332221      1122345678884  5 78877666 567899999876553

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.29  E-value=4.7e-08  Score=75.47  Aligned_cols=233  Identities=11%  Similarity=0.177  Sum_probs=159.9

Q ss_pred             cEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecc-----cCCceeeEEEecCCC-EEEEE-eCCCCEEEEEcC
Q psy7482          56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH-----KGTAVNHISIHPSGK-LALSV-GKDKTLRTWNLV  128 (327)
Q Consensus        56 ~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~-~l~~~-~~dg~i~iwd~~  128 (327)
                      ....+++.++++.+++-..+..|++||.+ ++.+..+....     ... ...+++.++.. .+++. +.++.|..++. 
T Consensus        24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~i~~~~~-  100 (279)
T d1q7fa_          24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLY-PNRVAVVRNSGDIIVTERSPTHQIQIYNQ-  100 (279)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSS-EEEEEEETTTTEEEEEECGGGCEEEEECT-
T ss_pred             CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccc-cccccccccccccceeccCCccccccccc-
Confidence            35789999999988877778899999965 66666552211     111 34566665443 34333 34456777775 


Q ss_pred             CCceeeeeeccccCccccceEEEEEccCCcEEEeec-CCeEEEEEecCCceeeEec---CCCceeEEEeecC-ceEEEeC
Q psy7482         129 KGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNE-TTVCTGN  203 (327)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~-~~l~~~~  203 (327)
                      .++....+....    ......++..+++.++++.. .+.+.+++. +++.+..+.   +......+++.++ ..+++..
T Consensus       101 ~g~~~~~~~~~~----~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~  175 (279)
T d1q7fa_         101 YGQFVRKFGATI----LQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN  175 (279)
T ss_dssp             TSCEEEEECTTT----CSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred             cccceeecCCCc----ccccceeccccCCcEEEEeeccceeeEecc-CCceeecccccccccccceeeeccceeEEeeec
Confidence            455444432222    23378899999998877765 677888875 456666654   4466788889888 5666777


Q ss_pred             CCCcEEEEEcCCCceeEEee--ecccceEEEEEEecCCCcEEEEecC-CCeEEEEEcCCCceeEEeecc--cCceEEEee
Q psy7482         204 EESAITAYNLTDGSHLWQIK--ASASRIKGLVFFSIPQETTVCTGNE-ESAITAYNLTDGSHLWHIKAS--ASRIKGLAS  278 (327)
Q Consensus       204 ~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~s~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~  278 (327)
                      ..+.|++||. +++.+.++.  +.......+++  +++|+.+++-.. ++.|.+|+ .+++.+..+...  ......+++
T Consensus       176 ~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giav--D~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav  251 (279)
T d1q7fa_         176 RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGI--NSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVAL  251 (279)
T ss_dssp             GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEE--CTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEE
T ss_pred             cccceeeeec-CCceeeeecccccccCCccccc--ccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEE
Confidence            8889999996 466666663  23445678888  489987777543 45799998 568877776543  235788999


Q ss_pred             eC-cEEEEEecCCcEEEEEccCc
Q psy7482         279 HR-NHLICITSAGDLVVWELNED  300 (327)
Q Consensus       279 ~~-~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .+ ..|+.++.+..|++|+....
T Consensus       252 ~~dG~l~V~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         252 MDDGSVVLASKDYRLYIYRYVQL  274 (279)
T ss_dssp             ETTTEEEEEETTTEEEEEECSCC
T ss_pred             eCCCcEEEEeCCCeEEEEEeeee
Confidence            99 56677778899999998776

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.26  E-value=6.4e-08  Score=74.12  Aligned_cols=230  Identities=12%  Similarity=0.119  Sum_probs=136.8

Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC---CEEEEEcCCCceeeeeeccccCccccceEEEEE
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK---TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVW  153 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~  153 (327)
                      .|.+.|....+.....  ..... +...+|+|||+.||......   .+.+.+...+...........      .....|
T Consensus        20 ~l~i~d~dG~~~~~l~--~~~~~-~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~   90 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVH--RSPQP-LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRH------NGAPAF   90 (269)
T ss_dssp             EEEEEETTSCSCEEEE--EESSC-EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSC------EEEEEE
T ss_pred             EEEEEcCCCCCcEEEe--cCCCc-eeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeecc------ccccee
Confidence            5777787644444333  34444 88899999999998775433   466667666655444433333      778899


Q ss_pred             ccCCcEEEeec--CCe--EEEEEecCCceeeEecCCCceeEEEeecC--ceEEEeCCCCc--EEEEEcCCCceeEEeeec
Q psy7482         154 SPEGLLYAIPI--QNK--AVVFSVEKAGVLQTLKSESKVHSVCFLNE--TTVCTGNEESA--ITAYNLTDGSHLWQIKAS  225 (327)
Q Consensus       154 ~~~~~~l~~~~--~~~--i~i~d~~~~~~~~~~~~~~~i~~~~~~~~--~~l~~~~~d~~--i~i~d~~~~~~~~~~~~~  225 (327)
                      +|+++.++...  .+.  +..+.....................++++  ..+++...++.  +...++..+.. ..+...
T Consensus        91 spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~-~~~~~~  169 (269)
T d2hqsa1          91 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWE  169 (269)
T ss_dssp             CTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCS
T ss_pred             cCCCCeeeEeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccc-eeeecc
Confidence            99999887764  333  33333333333333334444455566665  34555555554  55556555433 333344


Q ss_pred             ccceEEEEEEecCCCcEEEEecCC-Ce--EEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecC---CcEEEEEc
Q psy7482         226 ASRIKGLVFFSIPQETTVCTGNEE-SA--ITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSA---GDLVVWEL  297 (327)
Q Consensus       226 ~~~v~~~~~~~s~~~~~l~~~~~d-~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d---g~v~iw~~  297 (327)
                      ........+  +|+++.++..+.+ +.  +.+.+...+.  .....+........|+|  +.|+-.+..   ..|+++++
T Consensus       170 ~~~~~~~~~--spdg~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~  245 (269)
T d2hqsa1         170 GSQNQDADV--SSDGKFMVMVSSNGGQQHIAKQDLATGG--VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST  245 (269)
T ss_dssp             SSEEEEEEE--CTTSSEEEEEEECSSCEEEEEEETTTCC--EEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred             ccccccccc--ccccceeEEEeecCCceeeeEeeccccc--ceEeecCccccceEECCCCCEEEEEEcCCCCcEEEEEEC
Confidence            555666677  4899988876554 33  4445544443  33334455667788999  655544433   35888888


Q ss_pred             cCccCCCceeeeecCCCCceEEEEeCCC
Q psy7482         298 NEDVTREPQRVSATNDGCRFTCLAIRPP  325 (327)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~i~~l~~~p~  325 (327)
                      +..   ....+.  .....+...+|+|-
T Consensus       246 dg~---~~~~lt--~~~g~~~~p~WSP~  268 (269)
T d2hqsa1         246 DGR---FKARLP--ATDGQVKFPAWSPY  268 (269)
T ss_dssp             TSC---CEEECC--CSSSEEEEEEECCC
T ss_pred             CCC---CEEEEe--CCCCcEEeEEeCCC
Confidence            877   344433  33456888999994

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.20  E-value=1.1e-07  Score=73.83  Aligned_cols=220  Identities=15%  Similarity=0.150  Sum_probs=150.0

Q ss_pred             EEEECCC-CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeee
Q psy7482          59 CLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN  137 (327)
Q Consensus        59 ~~~~~~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  137 (327)
                      ...|.+. +++..+=-..+.|.-||..+++.. .+  ..... +.++++.+++.++++ +.+ .+..+|..+++......
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~-~~--~~~~~-~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~   95 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKT-VH--ALPFM-GSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAE   95 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EE--ECSSC-EEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEEC
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEE-EE--ECCCC-cEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEee
Confidence            4567764 444445456788999999887654 33  12233 888999988876664 454 59999999887654443


Q ss_pred             ccccCccccceEEEEEccCCcEEEeec-----CCeEEEEEecCCceeeEecCCCceeEEEeecC-c-eEEEeCCCCcEEE
Q psy7482         138 LSSYGVGFENLDSVVWSPEGLLYAIPI-----QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNE-T-TVCTGNEESAITA  210 (327)
Q Consensus       138 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~-~-~l~~~~~d~~i~i  210 (327)
                      .... .....++.+.+.|+|++.++..     .+.-.+|.+..++.......-...+.++|+++ + ++++-+..+.|..
T Consensus        96 ~~~~-~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~  174 (295)
T d2ghsa1          96 LESD-LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMR  174 (295)
T ss_dssp             SSTT-CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred             eecC-CCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeE
Confidence            3222 2234588999999999877753     23456777777766555555556788999998 3 5667778889999


Q ss_pred             EEcCCCc------e--eEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--
Q psy7482         211 YNLTDGS------H--LWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--  280 (327)
Q Consensus       211 ~d~~~~~------~--~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--  280 (327)
                      |++....      .  ...+.+..+....+++  +.+|++.++.-..+.|..|| .+++.+..+......+++++|-.  
T Consensus       175 ~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~v--D~~GnlWva~~~~g~V~~~d-p~G~~~~~i~lP~~~~T~~~FGG~d  251 (295)
T d2ghsa1         175 VPLDARTGLPTGKAEVFIDSTGIKGGMDGSVC--DAEGHIWNARWGEGAVDRYD-TDGNHIARYEVPGKQTTCPAFIGPD  251 (295)
T ss_dssp             EEBCTTTCCBSSCCEEEEECTTSSSEEEEEEE--CTTSCEEEEEETTTEEEEEC-TTCCEEEEEECSCSBEEEEEEESTT
T ss_pred             eeecccccccccceEEEeccCcccccccceEE--cCCCCEEeeeeCCCceEEec-CCCcEeeEecCCCCceEEEEEeCCC
Confidence            9875321      1  1112233445677887  48888887776778999999 57888888887777899999975  


Q ss_pred             --cEEEEEec
Q psy7482         281 --NHLICITS  288 (327)
Q Consensus       281 --~~l~~~~~  288 (327)
                        .+++|...
T Consensus       252 ~~~LyvTta~  261 (295)
T d2ghsa1         252 ASRLLVTSAR  261 (295)
T ss_dssp             SCEEEEEEBC
T ss_pred             CCEEEEEECC
Confidence              45555443

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=2.2e-08  Score=83.12  Aligned_cols=299  Identities=11%  Similarity=0.103  Sum_probs=165.0

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccc---ccccEEEEEECCCCCeEEEec---------CCCcEEEEEcCCCeEEE
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQ---HEGTITCLKFTPEGSHLISCS---------DDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~---------~d~~i~iw~~~~~~~~~   90 (327)
                      ++.++. -..+|.|.+||+.+++....+..   ....+....|+||+++++...         ..+.+.++|+.+++...
T Consensus        27 ~~~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~  105 (465)
T d1xfda1          27 DTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS  105 (465)
T ss_dssp             SSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE
T ss_pred             CCcEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceee
Confidence            555554 35578899999998865333322   223567788999999887653         35788999999887654


Q ss_pred             eEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCcc-------------ccceEEEEEccCC
Q psy7482          91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVG-------------FENLDSVVWSPEG  157 (327)
Q Consensus        91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~  157 (327)
                      ..........+....|+|||+.++... ++.|.+.+...+...+...-.....-             ...-..+-|||||
T Consensus       106 l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDg  184 (465)
T d1xfda1         106 LDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG  184 (465)
T ss_dssp             CCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS
T ss_pred             ccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCC
Confidence            431111222266789999999998875 57788888877665544432211100             0112467899999


Q ss_pred             cEEEeec--CCe---------------------------------EEEEEecCCceeeEec-------CCCceeEEEeec
Q psy7482         158 LLYAIPI--QNK---------------------------------AVVFSVEKAGVLQTLK-------SESKVHSVCFLN  195 (327)
Q Consensus       158 ~~l~~~~--~~~---------------------------------i~i~d~~~~~~~~~~~-------~~~~i~~~~~~~  195 (327)
                      +.|+...  +..                                 +.++|+.++.......       ...-+..+.|+|
T Consensus       185 k~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~  264 (465)
T d1xfda1         185 TRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT  264 (465)
T ss_dssp             SEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS
T ss_pred             CeEEEEEecccccceeecccccccccceeeeeeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcC
Confidence            9988753  232                                 3344443332211111       112356788988


Q ss_pred             CceEEEeC-----CCCcEEEEEcCCCceeEEeeecc-cce----EEEEEEecCCCcEEE---EecCCC--eEEEEEcC--
Q psy7482         196 ETTVCTGN-----EESAITAYNLTDGSHLWQIKASA-SRI----KGLVFFSIPQETTVC---TGNEES--AITAYNLT--  258 (327)
Q Consensus       196 ~~~l~~~~-----~d~~i~i~d~~~~~~~~~~~~~~-~~v----~~~~~~~s~~~~~l~---~~~~d~--~i~i~d~~--  258 (327)
                      ++.+++..     ....+.++|..+++....+.... ..|    ....|  +++|+.++   ..-.+|  .++..++.  
T Consensus       265 d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~--~~dg~~~~fi~~se~~g~~~ly~~~~~~~  342 (465)
T d1xfda1         265 STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVF--SKDGRKFFFIRAIPQGGRGKFYHITVSSS  342 (465)
T ss_dssp             SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEE--CTTSCSEEEEEEECCSSSSCEEEEEEECS
T ss_pred             CCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEeccCCceeE--ccCCCeeEEEEeeeecccCceEEEEeccc
Confidence            85444332     22357888998887655443222 211    22345  37887433   222222  34444322  


Q ss_pred             ----CCceeEEeecccCceEEE-eeeC---cEEEEEecCC--cEEEEEccCccCCCceeee-ecCCCCceEEEEeCCC
Q psy7482         259 ----DGSHLWHIKASASRIKGL-ASHR---NHLICITSAG--DLVVWELNEDVTREPQRVS-ATNDGCRFTCLAIRPP  325 (327)
Q Consensus       259 ----~~~~~~~~~~~~~~v~~~-~~~~---~~l~~~~~dg--~v~iw~~~~~~~~~~~~~~-~~~~~~~i~~l~~~p~  325 (327)
                          .+..+..+....-.|..+ .|++   ...+++..++  .-.+|.++-........+. .........++.|+|+
T Consensus       343 ~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~  420 (465)
T d1xfda1         343 QPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHS  420 (465)
T ss_dssp             SCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTT
T ss_pred             cccCCCceeEEeccCCceEEEEEEEcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCC
Confidence                223333444334345554 5766   3444555443  3456666544222222222 1223445678888886

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.98  E-value=1.3e-06  Score=67.59  Aligned_cols=210  Identities=15%  Similarity=0.164  Sum_probs=138.3

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecc--cCCc
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH--KGTA  100 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~--~~~~  100 (327)
                      ++.+..+--..+.|.-||..+++.. .+. ....+.++++.+++.++++ +.+ .+..+|..+++.........  ....
T Consensus        29 ~~~l~wvDi~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~~~~~~~~~  104 (295)
T d2ghsa1          29 SGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLTLHAELESDLPGNR  104 (295)
T ss_dssp             TTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEEEEECSSTTCTTEE
T ss_pred             CCEEEEEECCCCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceeeEEeeeecCCCccc
Confidence            4555555556788999998877543 222 3456889999988876665 444 58999999887654431111  1223


Q ss_pred             eeeEEEecCCCEEEEEeC----CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee-c-CCeEEEEEec
Q psy7482         101 VNHISIHPSGKLALSVGK----DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP-I-QNKAVVFSVE  174 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-~~~i~i~d~~  174 (327)
                      ++.+.+.|+|++.++...    .+.-.+|.+..++..........      .+.++|+++++.+..+ + .+.|..|++.
T Consensus       105 ~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~------~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d  178 (295)
T d2ghsa1         105 SNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISI------PNSICFSPDGTTGYFVDTKVNRLMRVPLD  178 (295)
T ss_dssp             EEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESS------EEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred             ceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCC------cceeeecCCCceEEEeecccceeeEeeec
Confidence            788999999987665432    23456677666655443322222      6789999999866555 3 7889988874


Q ss_pred             CCc------eee--Eec-CCCceeEEEeecCceEEEe-CCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEE
Q psy7482         175 KAG------VLQ--TLK-SESKVHSVCFLNETTVCTG-NEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVC  244 (327)
Q Consensus       175 ~~~------~~~--~~~-~~~~i~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~  244 (327)
                      ...      ...  ... ..+....+++..++.|.++ -..+.|..||. +++.+..+......+++++|-- ++.+.|+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG-~d~~~Ly  256 (295)
T d2ghsa1         179 ARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIG-PDASRLL  256 (295)
T ss_dssp             TTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEES-TTSCEEE
T ss_pred             ccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEEEeC-CCCCEEE
Confidence            321      111  111 3456788999888555555 46778999994 6888888877667789999963 6655544

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.6e-06  Score=70.38  Aligned_cols=279  Identities=9%  Similarity=0.048  Sum_probs=150.4

Q ss_pred             EEeCCCEEEEec---------CCCeEEEEEccccccccc--cccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeE
Q psy7482          20 VAATSKLAASSG---------ADETVVLYDMVKRKQSGA--LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        20 ~~~~~~~l~~~~---------~dg~v~~w~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~   88 (327)
                      ++.|+++++.+.         ..+.+.++|+.+++....  .......+....|||||+.||-.. ++.|.+.+...+..
T Consensus        68 ~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~  146 (465)
T d1xfda1          68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQA  146 (465)
T ss_dssp             ECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCC
T ss_pred             ECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCce
Confidence            334888877653         357889999988765432  223344566789999999998766 56788888877766


Q ss_pred             EEeEEecccCC----------------ceeeEEEecCCCEEEEEeCC-CC------------------------------
Q psy7482          89 EKLFKKAHKGT----------------AVNHISIHPSGKLALSVGKD-KT------------------------------  121 (327)
Q Consensus        89 ~~~~~~~~~~~----------------~v~~~~~~~~~~~l~~~~~d-g~------------------------------  121 (327)
                      .+....+..+.                .-..+.|+|||++|+....| ..                              
T Consensus       147 ~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np  226 (465)
T d1xfda1         147 IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENP  226 (465)
T ss_dssp             EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCC
T ss_pred             EEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeeccccCCCCC
Confidence            55542222221                01467799999999987532 22                              


Q ss_pred             ---EEEEEcCCCceeeeeeccc-cCccccceEEEEEccCCcEEEeecC-----CeEEEEEecCCceeeEec--CCCce--
Q psy7482         122 ---LRTWNLVKGRSAYITNLSS-YGVGFENLDSVVWSPEGLLYAIPIQ-----NKAVVFSVEKAGVLQTLK--SESKV--  188 (327)
Q Consensus       122 ---i~iwd~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~-----~~i~i~d~~~~~~~~~~~--~~~~i--  188 (327)
                         +.++|+.++.......... ......-+..+.|+|++++++...+     ..+.++|..+++....+.  ....|  
T Consensus       227 ~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~  306 (465)
T d1xfda1         227 SISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHR  306 (465)
T ss_dssp             EEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred             ceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEEEcCCceEec
Confidence               3444444332211111110 1111123678899999987766532     368888999887665554  22222  


Q ss_pred             --eEEEeecC-ce--EE-EeCCC--CcEEEEEcC------CCceeEEeeecccceEEEEEEecCCCcEE-EEecCCC--e
Q psy7482         189 --HSVCFLNE-TT--VC-TGNEE--SAITAYNLT------DGSHLWQIKASASRIKGLVFFSIPQETTV-CTGNEES--A  251 (327)
Q Consensus       189 --~~~~~~~~-~~--l~-~~~~d--~~i~i~d~~------~~~~~~~~~~~~~~v~~~~~~~s~~~~~l-~~~~~d~--~  251 (327)
                        ....|+|+ +.  ++ ..-.+  +.++.+++.      .++.+..+....-.|..+... +++++.+ +++..++  .
T Consensus       307 ~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~-d~~~~~vyF~a~~~~p~~  385 (465)
T d1xfda1         307 QNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAY-DEKGNKIYFLSTEDLPRR  385 (465)
T ss_dssp             CCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEE-ETTTTEEEEEESSSCTTC
T ss_pred             cCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEEEEE-cCCCCEEEEEEeCCCCCc
Confidence              34567787 32  22 22222  344444432      223333443334445565422 2555544 4554432  2


Q ss_pred             --EEEEEcCCCceeEEee---cccCceEEEeeeC--cEEEEEecC---CcEEEEEccCc
Q psy7482         252 --ITAYNLTDGSHLWHIK---ASASRIKGLASHR--NHLICITSA---GDLVVWELNED  300 (327)
Q Consensus       252 --i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~--~~l~~~~~d---g~v~iw~~~~~  300 (327)
                        ++--++..+.....+.   .......++.|+|  ++++.....   -.+.+++..++
T Consensus       386 ~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~  444 (465)
T d1xfda1         386 RQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDK  444 (465)
T ss_dssp             CEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTC
T ss_pred             eEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCC
Confidence              4333444332222111   2334566888888  555533322   23566665544

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.91  E-value=2.4e-06  Score=65.41  Aligned_cols=228  Identities=8%  Similarity=0.041  Sum_probs=127.6

Q ss_pred             EEeC--CCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecC----C--CcEEEEEcCCCeEEEe
Q psy7482          20 VAAT--SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD----D--GSIAIFRVGSWQLEKL   91 (327)
Q Consensus        20 ~~~~--~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d--~~i~iw~~~~~~~~~~   91 (327)
                      ++.+  |+.+|-.+ +|.|.+.|+.+++.. .+..+.+.+...+|||||+.||....    +  ..|.+++..+++....
T Consensus         6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           6 LNPDIHGDRIIFVC-CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             EEEEEETTEEEEEE-TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             cCCCCCCCEEEEEe-CCcEEEEECCCCCEE-EEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            3455  88877654 567888899877754 55667778899999999999885432    2  2477778877776543


Q ss_pred             EEe-----cccCCceeeEEEecCCCEEEEEeCC------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEE
Q psy7482          92 FKK-----AHKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLY  160 (327)
Q Consensus        92 ~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  160 (327)
                      ...     ..... .....|+|+++.|+.....      ..+...+...+.....   ...     ......+.+.+..+
T Consensus        84 t~~~~~~~~~~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~~~~~  154 (281)
T d1k32a2          84 TYFSGKSTGRRMF-TDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL---NLG-----PATHILFADGRRVI  154 (281)
T ss_dssp             CCCCEEEETTEEC-SEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC---CSC-----SCSEEEEETTEEEE
T ss_pred             eecCCCccCcccc-ccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe---cCC-----ccceeeecCCCeEE
Confidence            211     11122 5678899999988876432      1244455444332111   111     02222233333333


Q ss_pred             Eeec-C-----------CeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCC--CCcEEEEEcCCCceeEEeeecc
Q psy7482         161 AIPI-Q-----------NKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNE--ESAITAYNLTDGSHLWQIKASA  226 (327)
Q Consensus       161 ~~~~-~-----------~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~  226 (327)
                      .... .           ...........................+.++..+.....  ...|.++|+..++.. .+..+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~lt~~~  233 (281)
T d1k32a2         155 GRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLR-KHTSFT  233 (281)
T ss_dssp             EESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCE-ECCCCC
T ss_pred             EeeccccceeeeeccCCcceeeeeccccceeeccCCccccceeeeeccccceecccccccceEEEeCCCCceE-EeecCC
Confidence            3322 1           112223333333333333445555666667655554443  345777788765543 332222


Q ss_pred             cceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482         227 SRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       227 ~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                      . .....|  +|+|+.|+.. .++.|+++|+.+++..
T Consensus       234 ~-~~~~~~--SpDG~~I~f~-~~~~l~~~d~~~g~~~  266 (281)
T d1k32a2         234 D-YYPRHL--NTDGRRILFS-KGGSIYIFNPDTEKIE  266 (281)
T ss_dssp             S-SCEEEE--EESSSCEEEE-ETTEEEEECTTTCCEE
T ss_pred             C-cccccC--cCCCCEEEEE-eCCEEEEEECCCCCEE
Confidence            1 222345  3899887764 4688999999888644

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.82  E-value=6.3e-06  Score=62.93  Aligned_cols=233  Identities=12%  Similarity=0.116  Sum_probs=123.5

Q ss_pred             EECCC--CCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC-CC-----CEEEEEcCCCce
Q psy7482          61 KFTPE--GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DK-----TLRTWNLVKGRS  132 (327)
Q Consensus        61 ~~~~~--~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg-----~i~iwd~~~~~~  132 (327)
                      ..+|+  |+.++..+ ++.|.+.|+.+++..+ + ..+.+. +....|+|||+.|+.... ++     .|.+++..+++.
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~-L-t~~~~~-~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~   80 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRK-I-VSNLGV-INNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI   80 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEE-E-ECSSSE-EEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEE-E-ecCCCc-ccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCce
Confidence            35688  88887654 4578888999887654 4 445555 888999999999886543 22     377778877766


Q ss_pred             eeeeecccc-CccccceEEEEEccCCcEEEeec-------CCeEEEEEecCCceeeEecCCCceeEEEeecCc-eEEEeC
Q psy7482         133 AYITNLSSY-GVGFENLDSVVWSPEGLLYAIPI-------QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNET-TVCTGN  203 (327)
Q Consensus       133 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-------~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~  203 (327)
                      ......... ...........|+|+++.++...       ...+...+...+.....  .........+.+++ .+....
T Consensus        81 ~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  158 (281)
T d1k32a2          81 KRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL--NLGPATHILFADGRRVIGRNT  158 (281)
T ss_dssp             EECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC--CSCSCSEEEEETTEEEEEESC
T ss_pred             EEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe--cCCccceeeecCCCeEEEeec
Confidence            544322211 11112356789999999888753       12344555554443222  22233333344443 333322


Q ss_pred             CCC-----------cEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecC--CCeEEEEEcCCCceeEEeeccc
Q psy7482         204 EES-----------AITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNE--ESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       204 ~d~-----------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      .+.           ............. .............+.  ++. .+.....  ...|.++|+.+++.........
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~d~~g~~~~~lt~~~~  234 (281)
T d1k32a2         159 FELPHWKGYRGGTRGKIWIEVNSGAFK-KIVDMSTHVSSPVIV--GHR-IYFITDIDGFGQIYSTDLDGKDLRKHTSFTD  234 (281)
T ss_dssp             SCCTTSTTCCSTTCCEEEEEEETTEEE-EEECCSSCCEEEEEE--TTE-EEEEECTTSSCEEEEEETTSCSCEECCCCCS
T ss_pred             cccceeeeeccCCcceeeeecccccee-eccCCccccceeeee--ccc-cceecccccccceEEEeCCCCceEEeecCCC
Confidence            111           1122222222222 122222223333342  433 3333332  3458888887665433222222


Q ss_pred             CceEEEeeeC--cEEEEEecCCcEEEEEccCccCCCceeee
Q psy7482         271 SRIKGLASHR--NHLICITSAGDLVVWELNEDVTREPQRVS  309 (327)
Q Consensus       271 ~~v~~~~~~~--~~l~~~~~dg~v~iw~~~~~~~~~~~~~~  309 (327)
                      ..+  ..|+|  +.|+. ..+|.|+++|+.++   +...+.
T Consensus       235 ~~~--~~~SpDG~~I~f-~~~~~l~~~d~~~g---~~~~i~  269 (281)
T d1k32a2         235 YYP--RHLNTDGRRILF-SKGGSIYIFNPDTE---KIEKIE  269 (281)
T ss_dssp             SCE--EEEEESSSCEEE-EETTEEEEECTTTC---CEEECC
T ss_pred             ccc--ccCcCCCCEEEE-EeCCEEEEEECCCC---CEEEec
Confidence            233  34666  55443 44788999999888   444443

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.67  E-value=2.6e-05  Score=65.91  Aligned_cols=246  Identities=15%  Similarity=0.155  Sum_probs=143.9

Q ss_pred             EEeCCCEEEEecCCCeEEEEEcccccccccccccc----ccEEEEEECCCCCeEEEec------CCCcEEEEEcCCCeEE
Q psy7482          20 VAATSKLAASSGADETVVLYDMVKRKQSGALMQHE----GTITCLKFTPEGSHLISCS------DDGSIAIFRVGSWQLE   89 (327)
Q Consensus        20 ~~~~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~------~d~~i~iw~~~~~~~~   89 (327)
                      +++.+..++.++.||.+.-.|.++++.........    ..++.--.-.++ .++.+.      .+|.|.-+|+.+|+.+
T Consensus       111 ~a~~~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~  189 (571)
T d2ad6a1         111 LAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELK  189 (571)
T ss_dssp             CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred             ceeeCCeEEEEeCCCcEEeeehhhhhhhccccccccccccceeecCeEeCC-eEEEeeccccccccCcEEEEECCCCcEE
Confidence            44544556677889999999999998765443111    111110001133 444444      3678999999999998


Q ss_pred             EeEEeccc-----------------------------------CCce-eeEEEecCCCEEEEEeC---------------
Q psy7482          90 KLFKKAHK-----------------------------------GTAV-NHISIHPSGKLALSVGK---------------  118 (327)
Q Consensus        90 ~~~~~~~~-----------------------------------~~~v-~~~~~~~~~~~l~~~~~---------------  118 (327)
                      ..+.....                                   ...+ ...++.+....++.+..               
T Consensus       190 W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~  269 (571)
T d2ad6a1         190 WRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNK  269 (571)
T ss_dssp             EEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCT
T ss_pred             EEEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccc
Confidence            87632110                                   0012 23456666666665543               


Q ss_pred             -CCCEEEEEcCCCceeeeeeccccCcc----ccceEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEecCC----
Q psy7482         119 -DKTLRTWNLVKGRSAYITNLSSYGVG----FENLDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSE----  185 (327)
Q Consensus       119 -dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~----  185 (327)
                       ...+...|+++|+....+....+...    ...........+++   .++... +|.++++|..+++.+...+..    
T Consensus       270 ~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~  349 (571)
T d2ad6a1         270 WTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN  349 (571)
T ss_dssp             TTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred             cccceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccc
Confidence             24577889999998877665433211    01122222333443   233444 899999999998876432200    


Q ss_pred             ----------Cc--------------------------eeEEEeecC-ceEEEeC-------------------------
Q psy7482         186 ----------SK--------------------------VHSVCFLNE-TTVCTGN-------------------------  203 (327)
Q Consensus       186 ----------~~--------------------------i~~~~~~~~-~~l~~~~-------------------------  203 (327)
                                .+                          -...+++|+ +++++..                         
T Consensus       350 ~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~  429 (571)
T d2ad6a1         350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL  429 (571)
T ss_dssp             SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred             ccccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccce
Confidence                      00                          012455665 4444322                         


Q ss_pred             ------------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482         204 ------------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       204 ------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                                  ..|.+.-+|+++++.+.+.............   ..+.++++|+.|+.++.+|.++|+.+++++..
T Consensus       430 ~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~---TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~  504 (571)
T d2ad6a1         430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLY---TKGGLVWYATLDGYLKALDNKDGKELWNFKMP  504 (571)
T ss_dssp             EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEE---ETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             eeccccCCcccCCcccEEEeccCCCceeeEcCCCCCCCcceeE---ecCCEEEEECCCCeEEEEECCCCcEEEEEECC
Confidence                        1246888888899888776533221211111   35667778999999999999999999988744

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.58  E-value=0.00014  Score=61.69  Aligned_cols=242  Identities=14%  Similarity=0.109  Sum_probs=143.6

Q ss_pred             CEEEEecCCCeEEEEEccccccccccccccc-cEEEEEECC--CCCeEEEecC------CCcEEEEEcCCCeEEEeEEec
Q psy7482          25 KLAASSGADETVVLYDMVKRKQSGALMQHEG-TITCLKFTP--EGSHLISCSD------DGSIAIFRVGSWQLEKLFKKA   95 (327)
Q Consensus        25 ~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~   95 (327)
                      .+++.++.|+.|.-.|.++++++..+..... .-..+.-.|  .+..++.+..      .|.|+-+|..+|+++-.+...
T Consensus       122 ~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~  201 (596)
T d1w6sa_         122 ALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT  201 (596)
T ss_dssp             CEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred             eEEEEEeCCCCeEeeccccCceeccccccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeecc
Confidence            3678888899999999999988776542110 000111111  1345555543      488999999999998876321


Q ss_pred             c-----------------------------------c-CCceeeEEEecCCCEEEEEeCC----------------CCEE
Q psy7482          96 H-----------------------------------K-GTAVNHISIHPSGKLALSVGKD----------------KTLR  123 (327)
Q Consensus        96 ~-----------------------------------~-~~~v~~~~~~~~~~~l~~~~~d----------------g~i~  123 (327)
                      .                                   . ...-..+++.+...+++.+..+                ..|.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~siv  281 (596)
T d1w6sa_         202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF  281 (596)
T ss_dssp             SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred             CCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccc
Confidence            1                                   0 0101234566666666665432                3477


Q ss_pred             EEEcCCCceeeeeeccccCccc----cceEEEE-EccCCc---EEEeec-CCeEEEEEecCCceeeEecCC---------
Q psy7482         124 TWNLVKGRSAYITNLSSYGVGF----ENLDSVV-WSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSE---------  185 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~~----~~v~~~~-~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~---------  185 (327)
                      -.|+++++....+....+..-.    ....-+. -..+++   .++... +|.+.++|..+++.+...+..         
T Consensus       282 AlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~~~  361 (596)
T d1w6sa_         282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV  361 (596)
T ss_dssp             EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred             ccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeeccccccccccccc
Confidence            8899999988766654432110    1111222 123443   445455 899999999998877543210         


Q ss_pred             -----Cc--------------------------eeEEEeecC-ceEEEeC------------------------------
Q psy7482         186 -----SK--------------------------VHSVCFLNE-TTVCTGN------------------------------  203 (327)
Q Consensus       186 -----~~--------------------------i~~~~~~~~-~~l~~~~------------------------------  203 (327)
                           .+                          -...+++|+ +++....                              
T Consensus       362 d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~  441 (596)
T d1w6sa_         362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPG  441 (596)
T ss_dssp             CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred             cccccccccCccccccCCccceeEecccccccccCccccCCCCceEEecccccccccccccccccccccccccccccccC
Confidence                 00                          012345554 3333221                              


Q ss_pred             ---------CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482         204 ---------EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       204 ---------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                               .-|.+.-||+.+++.+.+.... .+..+-...  ..+.+++.|+.||.++.+|.++|+.+++++..
T Consensus       442 ~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~~-~~~~gg~ls--TagglVF~G~~Dg~l~A~Da~TGe~LW~~~~~  513 (596)
T d1w6sa_         442 PKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMA--TAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP  513 (596)
T ss_dssp             TTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             cccCcccCCCcceEEEEeCCCCceecccCCC-CCCccceeE--ecCCEEEEECCCCeEEEEECCCCcEeeEEECC
Confidence                     1156888888888887765432 222221221  45678888999999999999999999998754

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.57  E-value=9e-05  Score=62.58  Aligned_cols=273  Identities=10%  Similarity=0.093  Sum_probs=158.1

Q ss_pred             CCCEEEEecCCCeEEEEEcc-cccccccccccc----ccE-------EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEE
Q psy7482          23 TSKLAASSGADETVVLYDMV-KRKQSGALMQHE----GTI-------TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK   90 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~-~~~~~~~~~~~~----~~v-------~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~   90 (327)
                      ++.++++.+.++.|...|.. +|+.+.++....    ...       ..+++.  +..++.++.|+.+.-.|.++|+...
T Consensus        62 ~g~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~~~~g~l~alda~tG~~~w  139 (571)
T d2ad6a1          62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceee--CCeEEEEeCCCcEEeeehhhhhhhc
Confidence            55555555557888888874 688776653100    000       123333  3467788899999999999999877


Q ss_pred             eEEec--ccCCceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCc-------------------
Q psy7482          91 LFKKA--HKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGV-------------------  143 (327)
Q Consensus        91 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~-------------------  143 (327)
                      .....  +....++.--.-.++ .++.+..      +|.|.-+|+++|+.+..........                   
T Consensus       140 ~~~~~~~~~~~~~t~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~  218 (571)
T d2ad6a1         140 EVEVCDPKVGSTLTQAPFVAKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFG  218 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEEETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSS
T ss_pred             cccccccccccceeecCeEeCC-eEEEeeccccccccCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCccc
Confidence            65321  111112221112233 4455542      6789999999999988664332100                   


Q ss_pred             -------------cccce-EEEEEccCCcEEEeec-----------------CCeEEEEEecCCceeeEecC-C------
Q psy7482         144 -------------GFENL-DSVVWSPEGLLYAIPI-----------------QNKAVVFSVEKAGVLQTLKS-E------  185 (327)
Q Consensus       144 -------------~~~~v-~~~~~~~~~~~l~~~~-----------------~~~i~i~d~~~~~~~~~~~~-~------  185 (327)
                                   ....+ ...++.++..++..+.                 ...+.-.|.++++.+..++. .      
T Consensus       219 ~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~  298 (571)
T d2ad6a1         219 LGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDF  298 (571)
T ss_dssp             HHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCC
T ss_pred             ccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCcccccc
Confidence                         00011 2234555555444332                 24688889999998887761 1      


Q ss_pred             ---CceeEEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEeeecc-------------cce----------------
Q psy7482         186 ---SKVHSVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIKASA-------------SRI----------------  229 (327)
Q Consensus       186 ---~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v----------------  229 (327)
                         .+........+    ..++.++.+|.+.++|..+++.+...+...             .++                
T Consensus       299 D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~  378 (571)
T d2ad6a1         299 AGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNI  378 (571)
T ss_dssp             CCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEE
T ss_pred             ccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCcccccccccccccccccCcccccccccCceEE
Confidence               11112222222    256788899999999999998764322110             000                


Q ss_pred             ----------EEEEEEecCCCcEEEEecC-------------------------------------CCeEEEEEcCCCce
Q psy7482         230 ----------KGLVFFSIPQETTVCTGNE-------------------------------------ESAITAYNLTDGSH  262 (327)
Q Consensus       230 ----------~~~~~~~s~~~~~l~~~~~-------------------------------------d~~i~i~d~~~~~~  262 (327)
                                ...++  +|+...++....                                     .|.|.-+|+.+++.
T Consensus       379 ~p~~~Gg~~w~~~a~--dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~  456 (571)
T d2ad6a1         379 CPSAMGFHNQGVDSY--DPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA  456 (571)
T ss_dssp             SSCTTCSSCSCBCEE--ETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred             EeccccccccccceE--CCCCceEEEeccccccccccccccccCCccccccceeeccccCCcccCCcccEEEeccCCCce
Confidence                      01233  244444433221                                     25688889999998


Q ss_pred             eEEeecccCceEE-EeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         263 LWHIKASASRIKG-LASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       263 ~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      +++.......... +.....++++++.||.++-+|.+++
T Consensus       457 ~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tG  495 (571)
T d2ad6a1         457 KWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDG  495 (571)
T ss_dssp             EEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             eeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCC
Confidence            8877633222111 2223478889999999999999998

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.46  E-value=0.0001  Score=62.19  Aligned_cols=272  Identities=11%  Similarity=0.087  Sum_probs=159.5

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccc----------cE-EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEG----------TI-TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~----------~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      ++ .|..++.++.|.-.|.++|+.+.++.....          .+ ..++.  .+..++.+..++.|.-.|..+++.+..
T Consensus        66 ~g-~vyv~t~~~~v~AlDa~tG~~lW~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~g~l~Alda~tG~~~w~  142 (560)
T d1kv9a2          66 DG-VIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS  142 (560)
T ss_dssp             TT-EEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             CC-EEEEECCCCeEEEEeCCCCCEEEEECCCCCccccccccccccccCcce--eCCeEEEEeCCCEEEEEECCCCcEEec
Confidence            54 444556688899999999988766531100          00 01111  145688888999999999999998887


Q ss_pred             EEecccCCceeeEEEec--CCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCcc-------------------
Q psy7482          92 FKKAHKGTAVNHISIHP--SGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGVG-------------------  144 (327)
Q Consensus        92 ~~~~~~~~~v~~~~~~~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~-------------------  144 (327)
                      ........ -..+.-.|  ....++.+..      .|.|.-+|.++|+.+..+........                   
T Consensus       143 ~~~~~~~~-~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  221 (560)
T d1kv9a2         143 QQTTDPAK-PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ  221 (560)
T ss_dssp             EECSCTTS-SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred             cCccCccc-ceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeeeeccccccCCccccccccccccccccc
Confidence            73222111 11111111  1224444432      36799999999999887754322100                   


Q ss_pred             ------ccc-eEEEEEccCCcEEEeec--------------------CCeEEEEEecCCceeeEec---CC-------Cc
Q psy7482         145 ------FEN-LDSVVWSPEGLLYAIPI--------------------QNKAVVFSVEKAGVLQTLK---SE-------SK  187 (327)
Q Consensus       145 ------~~~-v~~~~~~~~~~~l~~~~--------------------~~~i~i~d~~~~~~~~~~~---~~-------~~  187 (327)
                            ... -..+++.+...++..+.                    ...|.-.|.++++....++   |.       ..
T Consensus       222 ~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~  301 (560)
T d1kv9a2         222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ  301 (560)
T ss_dssp             HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred             cccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEecCCccceeEEEeccccccccccccce
Confidence                  000 12245566555544321                    2367788999999887765   11       11


Q ss_pred             eeEEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEeeeccc-ce---------------------------------
Q psy7482         188 VHSVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIKASAS-RI---------------------------------  229 (327)
Q Consensus       188 i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v---------------------------------  229 (327)
                      ..-+....+    ..++.+..+|.+.++|..+++++...+.-.. ..                                 
T Consensus       302 ~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~  381 (560)
T d1kv9a2         302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH  381 (560)
T ss_dssp             EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred             eeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhhccccccccccccccceeeeecccccc
Confidence            111112222    3577889999999999999987754321100 00                                 


Q ss_pred             --EEEEEEecCCCcEEEEec------------------------------------CCCeEEEEEcCCCceeEEeecccC
Q psy7482         230 --KGLVFFSIPQETTVCTGN------------------------------------EESAITAYNLTDGSHLWHIKASAS  271 (327)
Q Consensus       230 --~~~~~~~s~~~~~l~~~~------------------------------------~d~~i~i~d~~~~~~~~~~~~~~~  271 (327)
                        ...++  +|+...++...                                    ..|.|.-+|+.+++.+++......
T Consensus       382 ~w~~~a~--dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~~~  459 (560)
T d1kv9a2         382 NWHSMSF--NPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH  459 (560)
T ss_dssp             CSSCCEE--ETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS
T ss_pred             ccccccc--cCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcccccceEEEeCCCCeEeeeccCCCC
Confidence              02223  24544444322                                    125788999999998887764321


Q ss_pred             ceE-EEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         272 RIK-GLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       272 ~v~-~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      ... .++-...+++.|+.||.++.+|..++
T Consensus       460 ~~gg~l~TagglVF~G~~dg~l~A~Da~tG  489 (560)
T d1kv9a2         460 WNGGTLSTAGNLVFQGTAAGQMHAYSADKG  489 (560)
T ss_dssp             CCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             CCCceeEECCCEEEEECCCCcEEEEECCCC
Confidence            111 13333488889999999999999998

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.43  E-value=0.0002  Score=56.58  Aligned_cols=219  Identities=11%  Similarity=0.064  Sum_probs=137.2

Q ss_pred             EEEe-----CCCEEEEec-CCCeEEEEEcccccccccccc-ccccEEEEEECC--CCCeEEEecCC--------------
Q psy7482          19 SVAA-----TSKLAASSG-ADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTP--EGSHLISCSDD--------------   75 (327)
Q Consensus        19 ~~~~-----~~~~l~~~~-~dg~v~~w~~~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~~~~~d--------------   75 (327)
                      .+++     ||++++... .++.|.+-|+.+.+..+.+.. ....+..++..+  +..+++.++.+              
T Consensus        89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~  168 (459)
T d1fwxa2          89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV  168 (459)
T ss_dssp             EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred             cccccCCccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccch
Confidence            5666     678877655 678899999999887654432 234466666654  55677776653              


Q ss_pred             ----CcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCCC-------------------------------
Q psy7482          76 ----GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK-------------------------------  120 (327)
Q Consensus        76 ----~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------------------------------  120 (327)
                          +.+.+.|.++.+....+...  .. ...++++++|+++++.+.+.                               
T Consensus       169 ~~y~~~~t~ID~~tm~V~~QV~V~--g~-ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~  245 (459)
T d1fwxa2         169 ANYVNVFTAVDADKWEVAWQVLVS--GN-LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA  245 (459)
T ss_dssp             G-EEEEEEEEETTTTEEEEEEEES--SC-CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred             hhcceEEEEEecCCceEEEEeeeC--CC-hhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhc
Confidence                23667899988887776333  23 77889999999999887532                               


Q ss_pred             -------CEEEEEcCCC---ceeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCc-----------
Q psy7482         121 -------TLRTWNLVKG---RSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAG-----------  177 (327)
Q Consensus       121 -------~i~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~-----------  177 (327)
                             .+.+.|.+..   .....++.+..      ...+..+|||+++++++  +.++.++|+++-.           
T Consensus       246 Gk~~eingV~VVD~~~~~~~~v~~yIPVpKs------PHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~  319 (459)
T d1fwxa2         246 GDYQELNGVKVVDGRKEASSLFTRYIPIANN------PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRS  319 (459)
T ss_dssp             TCSEEETTEEEEECSGG--CSSEEEEEEESS------CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGG
T ss_pred             CCcEEeCCceeecccccCCcceeEEEecCCC------CCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccc
Confidence                   1334443321   11112222222      56789999999998886  8999999997422           


Q ss_pred             -eeeEecCCCceeEEEeecCc-eEEEeCCCCcEEEEEcCCC----------ceeEEeeecccceEEEEEE----ecCCCc
Q psy7482         178 -VLQTLKSESKVHSVCFLNET-TVCTGNEESAITAYNLTDG----------SHLWQIKASASRIKGLVFF----SIPQET  241 (327)
Q Consensus       178 -~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~----------~~~~~~~~~~~~v~~~~~~----~s~~~~  241 (327)
                       .....+..-.....+|+.++ -..+-.-|..|.-|++...          ..+.++..|-.+ -.+...    ..|+|+
T Consensus       320 ~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~-gh~~~~~g~t~~~dgk  398 (459)
T d1fwxa2         320 AVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQP-GHLKTVMGETLDATND  398 (459)
T ss_dssp             GEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCE-EEEEETTTTSTTCCSS
T ss_pred             cEEeecccCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccCC-CCCccCcCCcCCCCCC
Confidence             11222234455667887775 4455678999999998532          334444433321 111110    037888


Q ss_pred             EEEEec
Q psy7482         242 TVCTGN  247 (327)
Q Consensus       242 ~l~~~~  247 (327)
                      +|++..
T Consensus       399 ~l~~~n  404 (459)
T d1fwxa2         399 WLVCLS  404 (459)
T ss_dssp             EEEEEE
T ss_pred             EEEEec
Confidence            888865

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.42  E-value=0.00015  Score=54.56  Aligned_cols=216  Identities=11%  Similarity=0.075  Sum_probs=134.2

Q ss_pred             CCccEEEEEe--CCC-EEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCCCeE
Q psy7482          13 HTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQL   88 (327)
Q Consensus        13 h~~~v~~~~~--~~~-~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~~~~   88 (327)
                      +...+.+|+|  ..+ ++.+-..++.|+..++........+......+..+++..-+..|. +-...+.|.+.++.....
T Consensus        34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~  113 (263)
T d1npea_          34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR  113 (263)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceE
Confidence            3345667888  344 445556678898888875544433433335688899876555555 555677899999875543


Q ss_pred             EEeEEecccCCceeeEEEecCCCEEEEEeCC-CC--EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-
Q psy7482          89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKD-KT--LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-  164 (327)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~--i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  164 (327)
                      ...+ ...... +..+++.|...+++..... +.  |.--++...... .+....    ......+++++.++.|..+. 
T Consensus       114 ~~l~-~~~l~~-p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~-~i~~~~----~~~P~glaiD~~~~~lYw~d~  186 (263)
T d1npea_         114 RVLF-DTGLVN-PRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR-ILAQDN----LGLPNGLTFDAFSSQLCWVDA  186 (263)
T ss_dssp             EEEE-CSSCSS-EEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE-EEECTT----CSCEEEEEEETTTTEEEEEET
T ss_pred             EEEe-cccccC-CcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce-eeeeec----ccccceEEEeecCcEEEEEeC
Confidence            3333 333344 8899999977776655432 23  444455433322 221111    12378999998777665553 


Q ss_pred             -CCeEEEEEecCCceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEee-ecccceEEEEEE
Q psy7482         165 -QNKAVVFSVEKAGVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIK-ASASRIKGLVFF  235 (327)
Q Consensus       165 -~~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~  235 (327)
                       .+.|...|+........+.......++++..+..+++-...+.|...|..+++.+..+. ........+++.
T Consensus       187 ~~~~I~~~~~~g~~~~~v~~~~~~P~~lav~~~~lYwtd~~~~~I~~~~~~~g~~~~~~~~~~~~~~~gi~v~  259 (263)
T d1npea_         187 GTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIA  259 (263)
T ss_dssp             TTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEE
T ss_pred             CCCEEEEEECCCCCeEEEECCCCCcEEEEEECCEEEEEECCCCEEEEEECCCCccceEECCCCCCCcceEEEe
Confidence             78899999876555444444344568888755666776778899999998888776653 223344566554

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.40  E-value=0.00042  Score=58.69  Aligned_cols=274  Identities=11%  Similarity=0.086  Sum_probs=159.1

Q ss_pred             CCCEEEEecCCCeEEEEEc-ccccccccccccc----c------cE-EEEEECCC----CCeEEEecCCCcEEEEEcCCC
Q psy7482          23 TSKLAASSGADETVVLYDM-VKRKQSGALMQHE----G------TI-TCLKFTPE----GSHLISCSDDGSIAIFRVGSW   86 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~-~~~~~~~~~~~~~----~------~v-~~~~~~~~----~~~l~~~~~d~~i~iw~~~~~   86 (327)
                      ++.++++++.++.|...|. ++|+.+..+....    .      .+ ..+++.++    ..+++.++.|+.|.-.|.+++
T Consensus        62 ~g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG  141 (596)
T d1w6sa_          62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (596)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEeeccccC
Confidence            6666666666677888886 5788776653110    0      01 23444332    346888999999999999999


Q ss_pred             eEEEeEEecc--cCCceeeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccC----------------
Q psy7482          87 QLEKLFKKAH--KGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYG----------------  142 (327)
Q Consensus        87 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~----------------  142 (327)
                      +....+....  ....++.--.- -+..++.+..      .|.|+-+|+++|+.+..+......                
T Consensus       142 ~~~w~~~~~d~~~~~~~t~~P~v-~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~  220 (596)
T d1w6sa_         142 ETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY  220 (596)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred             ceeccccccccccccccccCCcE-ECCeEEEeeccccccccCceEEEECCCCcEEEEeeccCCccccccccccccccccc
Confidence            9988873221  11112211111 1335555543      488999999999998876432110                


Q ss_pred             -----------------ccccceEEEEEccCCcEEEeec-----------------CCeEEEEEecCCceeeEec--CC-
Q psy7482         143 -----------------VGFENLDSVVWSPEGLLYAIPI-----------------QNKAVVFSVEKAGVLQTLK--SE-  185 (327)
Q Consensus       143 -----------------~~~~~v~~~~~~~~~~~l~~~~-----------------~~~i~i~d~~~~~~~~~~~--~~-  185 (327)
                                       .....-..+++.+...++..+.                 ...+.-.|.++++....++  +. 
T Consensus       221 g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D  300 (596)
T d1w6sa_         221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD  300 (596)
T ss_dssp             CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred             cccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccccccccccccccccccceecc
Confidence                             0000112345555555544432                 2458889999999988776  11 


Q ss_pred             -------CceeEEEe-ecC----ceEEEeCCCCcEEEEEcCCCceeEEeeecc-------------cce-----------
Q psy7482         186 -------SKVHSVCF-LNE----TTVCTGNEESAITAYNLTDGSHLWQIKASA-------------SRI-----------  229 (327)
Q Consensus       186 -------~~i~~~~~-~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------~~v-----------  229 (327)
                             ..+.-+.. ..+    ..++....+|.+.++|..+++.+...+...             .++           
T Consensus       301 ~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~~~d~~~~~p~~~~~~~~~~~~  380 (596)
T d1w6sa_         301 EWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDH  380 (596)
T ss_dssp             SSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTC
T ss_pred             ccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeeccccccccccccccccccccccCccccccCCc
Confidence                   11222221 112    357788899999999999998764322100             000           


Q ss_pred             ---------------EEEEEEecCCCcEEEEec---------------------------------------CCCeEEEE
Q psy7482         230 ---------------KGLVFFSIPQETTVCTGN---------------------------------------EESAITAY  255 (327)
Q Consensus       230 ---------------~~~~~~~s~~~~~l~~~~---------------------------------------~d~~i~i~  255 (327)
                                     ...++.  |+..++....                                       .-|.|.-|
T Consensus       381 ~~~~i~pg~~Gg~nw~~~a~d--p~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~g~~~~~~~~G~l~A~  458 (596)
T d1w6sa_         381 LAKDICPSAMGYHNQGHDSYD--PKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY  458 (596)
T ss_dssp             CEEEESSCTTCSSCSCBCEEE--TTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred             cceeEecccccccccCccccC--CCCceEEecccccccccccccccccccccccccccccccCcccCcccCCCcceEEEE
Confidence                           011221  3333332211                                       01578888


Q ss_pred             EcCCCceeEEeecccCceEE--EeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         256 NLTDGSHLWHIKASASRIKG--LASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       256 d~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      |+.+++.++...... +..+  +.-...+++.|+.||.++.+|..++
T Consensus       459 D~~TG~~~W~~~~~~-~~~gg~lsTagglVF~G~~Dg~l~A~Da~TG  504 (596)
T d1w6sa_         459 NAITGDYKWEKMERF-AVWGGTMATAGDLVFYGTLDGYLKARDSDTG  504 (596)
T ss_dssp             CTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             eCCCCceecccCCCC-CCccceeEecCCEEEEECCCCeEEEEECCCC
Confidence            999998887765332 2221  1122378888999999999999998

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.38  E-value=0.00034  Score=59.08  Aligned_cols=273  Identities=9%  Similarity=0.015  Sum_probs=157.9

Q ss_pred             CCCEEEEecCCCeEEEEEcccccccccccccc----------ccE-EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE----------GTI-TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL   91 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~----------~~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~   91 (327)
                      ++ .++.++.++.|.-+|.++|+.+.++....          ..+ ..+.+.  +..++.++.|+.+.-.|..+|+.+..
T Consensus        77 ~g-~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t~~g~l~alda~tG~~~W~  153 (573)
T d1kb0a2          77 DG-IMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWDGRLIALDAATGKEVWH  153 (573)
T ss_dssp             TT-EEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             CC-EEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEecccceeeeccccccceec
Confidence            55 45566778899999999998886653210          001 112222  33577788899999999999998866


Q ss_pred             EEec-ccCCce--eeEEEecCCCEEEEEeC------CCCEEEEEcCCCceeeeeeccccCcc------------------
Q psy7482          92 FKKA-HKGTAV--NHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLSSYGVG------------------  144 (327)
Q Consensus        92 ~~~~-~~~~~v--~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~------------------  144 (327)
                      .... +....+  ...-.- -+..+++++.      .|.|..+|.++|+.+..+........                  
T Consensus       154 ~~~~~~~~~~~~~~~~p~v-~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~  232 (573)
T d1kb0a2         154 QNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS  232 (573)
T ss_dssp             EETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred             ccCccCCcceEEeecceEE-EeccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCC
Confidence            5221 111101  110011 1334555432      46799999999999887644321100                  


Q ss_pred             --------ccce-EEEEEccCCcEEEeec--------------------CCeEEEEEecCCceeeEecC----------C
Q psy7482         145 --------FENL-DSVVWSPEGLLYAIPI--------------------QNKAVVFSVEKAGVLQTLKS----------E  185 (327)
Q Consensus       145 --------~~~v-~~~~~~~~~~~l~~~~--------------------~~~i~i~d~~~~~~~~~~~~----------~  185 (327)
                              ...+ ...++.++..++..+.                    ...+.-.|.++++....++.          .
T Consensus       233 ~~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~wd~d~~  312 (573)
T d1kb0a2         233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST  312 (573)
T ss_dssp             GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred             CceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCccccccccc
Confidence                    0011 1344555554443211                    13577788888888776651          1


Q ss_pred             CceeEEEeecC----ceEEEeCCCCcEEEEEcCCCceeEEeeecccc---------------------------------
Q psy7482         186 SKVHSVCFLNE----TTVCTGNEESAITAYNLTDGSHLWQIKASASR---------------------------------  228 (327)
Q Consensus       186 ~~i~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---------------------------------  228 (327)
                      .+........+    ..++.++.+|.+.++|..+++.+...+.....                                 
T Consensus       313 ~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~Gg  392 (573)
T d1kb0a2         313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA  392 (573)
T ss_dssp             SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred             ceeeecceecCCCceeeeeeccccceeEEeccccccccccccccccccccccccccceeeeeeccccccceEEeecccCC
Confidence            11122222222    46778889999999999999877544311100                                 


Q ss_pred             --eEEEEEEecCCCcEEEEecC-------------------------------------------CCeEEEEEcCCCcee
Q psy7482         229 --IKGLVFFSIPQETTVCTGNE-------------------------------------------ESAITAYNLTDGSHL  263 (327)
Q Consensus       229 --v~~~~~~~s~~~~~l~~~~~-------------------------------------------d~~i~i~d~~~~~~~  263 (327)
                        -...++.  |+...++....                                           -|.+.-||+.+++.+
T Consensus       393 ~~w~~~a~d--p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~~G~l~AiD~~tGk~~  470 (573)
T d1kb0a2         393 HNWHPMSFN--PQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA  470 (573)
T ss_dssp             SCSSCCEEE--TTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE
T ss_pred             ccccccccC--CCcceEEeeccccceeeecccccccccCCCCccccccccccccccccCCCCCCCcccEEEeCCCCCceE
Confidence              0012332  44443333111                                           146888999999998


Q ss_pred             EEeecccCce-EEEeeeCcEEEEEecCCcEEEEEccCcc
Q psy7482         264 WHIKASASRI-KGLASHRNHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       264 ~~~~~~~~~v-~~~~~~~~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      ++.+...... -.++....++++|+.||.++.+|..++.
T Consensus       471 W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe  509 (573)
T d1kb0a2         471 WSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE  509 (573)
T ss_dssp             EEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             eeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCc
Confidence            8876543211 1233444888899999999999999983

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.31  E-value=0.00065  Score=57.08  Aligned_cols=245  Identities=13%  Similarity=0.148  Sum_probs=143.9

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccc-cEEEEEECC--CCCeEEEecC------CCcEEEEEcCCCeEEEeEE
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEG-TITCLKFTP--EGSHLISCSD------DGSIAIFRVGSWQLEKLFK   93 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~   93 (327)
                      .+..++.+..|+.|.-.|..+++.+........ .-..+.-.|  .+..++.+..      .|.|.-+|.++|+.+-.+.
T Consensus       116 ~~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~  195 (560)
T d1kv9a2         116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY  195 (560)
T ss_dssp             EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred             eCCeEEEEeCCCEEEEEECCCCcEEeccCccCcccceeeeeeeeeecCcccccccceeccccceEEEEECCCceEEeeee
Confidence            345677778889999999999988766542211 000111111  1223444432      3679999999999988873


Q ss_pred             eccc----------------------------CCce-eeEEEecCCCEEEEEeC-------------------CCCEEEE
Q psy7482          94 KAHK----------------------------GTAV-NHISIHPSGKLALSVGK-------------------DKTLRTW  125 (327)
Q Consensus        94 ~~~~----------------------------~~~v-~~~~~~~~~~~l~~~~~-------------------dg~i~iw  125 (327)
                      ....                            +..+ ..+.+.+...+++.+..                   ...|.-.
T Consensus       196 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~sivAl  275 (560)
T d1kv9a2         196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI  275 (560)
T ss_dssp             SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred             eccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeEEe
Confidence            2211                            0101 22556666666654432                   2357778


Q ss_pred             EcCCCceeeeeeccccCcc----ccceEEEEEccCCc---EEEeec-CCeEEEEEecCCceeeEecCCC-----------
Q psy7482         126 NLVKGRSAYITNLSSYGVG----FENLDSVVWSPEGL---LYAIPI-QNKAVVFSVEKAGVLQTLKSES-----------  186 (327)
Q Consensus       126 d~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~---~l~~~~-~~~i~i~d~~~~~~~~~~~~~~-----------  186 (327)
                      |+++++....+....+..-    .....-+....+++   .++.+. +|.++++|..+++++...+...           
T Consensus       276 d~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~~~  355 (560)
T d1kv9a2         276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT  355 (560)
T ss_dssp             CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred             cCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccChhh
Confidence            8899988776655443211    01111122222342   444454 8999999999998775443100           


Q ss_pred             --------------------------ceeEEEeecC-ceEEEeC------------------------------------
Q psy7482         187 --------------------------KVHSVCFLNE-TTVCTGN------------------------------------  203 (327)
Q Consensus       187 --------------------------~i~~~~~~~~-~~l~~~~------------------------------------  203 (327)
                                                .-...+++|+ +.+++..                                    
T Consensus       356 ~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  435 (560)
T d1kv9a2         356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV  435 (560)
T ss_dssp             CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred             ccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCCcc
Confidence                                      0013445565 4443321                                    


Q ss_pred             CCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         204 EESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       204 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      ..|.+.-+|+.+++.+.+...... ...-...  -.+.++++|+.||.++.+|.++|+.+++++...
T Consensus       436 ~~G~l~A~D~~tGk~~W~~~~~~~-~~gg~l~--TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~  499 (560)
T d1kv9a2         436 VSGALLAWDPVKQKAAWKVPYPTH-WNGGTLS--TAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS  499 (560)
T ss_dssp             CEEEEEEEETTTTEEEEEEEESSS-CCCCEEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             cccceEEEeCCCCeEeeeccCCCC-CCCceeE--ECCCEEEEECCCCcEEEEECCCCcEeEEEECCC
Confidence            125688899999998887653322 2211221  356778889999999999999999999988543

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=0.00037  Score=52.39  Aligned_cols=235  Identities=9%  Similarity=0.034  Sum_probs=142.8

Q ss_pred             CeEEEEEccccccc-----cccccccccEEEEEECCCCCeEEEe-cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEe
Q psy7482          34 ETVVLYDMVKRKQS-----GALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH  107 (327)
Q Consensus        34 g~v~~w~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~  107 (327)
                      +.|+-.+++.....     ..+..+...+.+++|.+..+.|+.. ..++.|...++........+ ...... +..+++.
T Consensus        10 ~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~-~~~~~~-p~~iAvD   87 (263)
T d1npea_          10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-RQDLGS-PEGIALD   87 (263)
T ss_dssp             EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE-CTTCCC-EEEEEEE
T ss_pred             CeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEE-Eecccc-ccEEEEe
Confidence            46666666543221     1233344567889999877766655 45677888888765544444 333344 8899998


Q ss_pred             cCCCEEEEE-eCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CC--eEEEEEecCCceeeEe
Q psy7482         108 PSGKLALSV-GKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QN--KAVVFSVEKAGVLQTL  182 (327)
Q Consensus       108 ~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~--~i~i~d~~~~~~~~~~  182 (327)
                      .-+..|+.+ ...+.|.+.++........... .    ...+..++++|...++....  .+  .|...++.........
T Consensus        88 ~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~-~----l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~  162 (263)
T d1npea_          88 HLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDT-G----LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA  162 (263)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSCSCEEEECS-S----CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEE
T ss_pred             ccCCeEEEeccCCCEEEEEecCCceEEEEecc-c----ccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeee
Confidence            766666544 4567899999875543222211 1    12388999999776665543  22  3544455443333333


Q ss_pred             c-CCCceeEEEeecC-ceE-EEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCC
Q psy7482         183 K-SESKVHSVCFLNE-TTV-CTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTD  259 (327)
Q Consensus       183 ~-~~~~i~~~~~~~~-~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~  259 (327)
                      . .-.....+++.+. +.| ++-...+.|...++........+.+-.. ..++++.   ++....+-...+.|...|..+
T Consensus       163 ~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~-P~~lav~---~~~lYwtd~~~~~I~~~~~~~  238 (263)
T d1npea_         163 QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY-PFAVTSY---GKNLYYTDWKTNSVIAMDLAI  238 (263)
T ss_dssp             CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCS-EEEEEEE---TTEEEEEETTTTEEEEEETTT
T ss_pred             eecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCC-cEEEEEE---CCEEEEEECCCCEEEEEECCC
Confidence            2 3356789999876 554 5556778899999865444333333333 4578773   555666666778899999988


Q ss_pred             CceeEEeecc-cCceEEEeee
Q psy7482         260 GSHLWHIKAS-ASRIKGLASH  279 (327)
Q Consensus       260 ~~~~~~~~~~-~~~v~~~~~~  279 (327)
                      ++.+..+..+ .....+++..
T Consensus       239 g~~~~~~~~~~~~~~~gi~v~  259 (263)
T d1npea_         239 SKEMDTFHPHKQTRLYGITIA  259 (263)
T ss_dssp             TEEEEEECCSSCCCCCCEEEE
T ss_pred             CccceEECCCCCCCcceEEEe
Confidence            8877665432 2344455543

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=98.12  E-value=0.0017  Score=54.62  Aligned_cols=242  Identities=10%  Similarity=0.104  Sum_probs=138.3

Q ss_pred             CCEEEEecCCCeEEEEEcccccccccccc--cc-ccEEEEEECC--CCCeEEEecC------CCcEEEEEcCCCeEEEeE
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQSGALMQ--HE-GTITCLKFTP--EGSHLISCSD------DGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~--~~-~~v~~~~~~~--~~~~l~~~~~------d~~i~iw~~~~~~~~~~~   92 (327)
                      +..++.+..|+.+.-.|..+|+.+.....  +. ..+. +.-.|  .+..+++++.      .|.|.-+|.++|+.+..+
T Consensus       128 ~~~v~~~t~~g~l~alda~tG~~~W~~~~~~~~~~~~~-~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~  206 (573)
T d1kb0a2         128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLT-ITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW  206 (573)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred             CCcEEEEecccceeeeccccccceecccCccCCcceEE-eecceEEEeccEEEeeccccccccceEEEEecCCccceeee
Confidence            34555667788888889999987654332  11 1111 11111  1334555433      467999999999998876


Q ss_pred             EecccC-----------------------------Cce-eeEEEecCCCEEEEEeC-------------------CCCEE
Q psy7482          93 KKAHKG-----------------------------TAV-NHISIHPSGKLALSVGK-------------------DKTLR  123 (327)
Q Consensus        93 ~~~~~~-----------------------------~~v-~~~~~~~~~~~l~~~~~-------------------dg~i~  123 (327)
                      ......                             ..+ ...++.++...++....                   ...|.
T Consensus       207 ~t~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svv  286 (573)
T d1kb0a2         207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV  286 (573)
T ss_dssp             ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred             eeccccCCCCCCcccccccccccCCCCceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEE
Confidence            322100                             001 12455665555554321                   12466


Q ss_pred             EEEcCCCceeeeeeccccCcc----ccceEEEEEccCC---cEEEeec-CCeEEEEEecCCceeeEecCC----------
Q psy7482         124 TWNLVKGRSAYITNLSSYGVG----FENLDSVVWSPEG---LLYAIPI-QNKAVVFSVEKAGVLQTLKSE----------  185 (327)
Q Consensus       124 iwd~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~---~~l~~~~-~~~i~i~d~~~~~~~~~~~~~----------  185 (327)
                      -.|+++++.........+..-    ..+........++   ..++.+. +|.+.++|..+++.+...+..          
T Consensus       287 Ald~~tG~~~W~~q~~~~d~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~~~~~~~  366 (573)
T d1kb0a2         287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK  366 (573)
T ss_dssp             EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred             EecccchheeecccccCcccccccccceeeecceecCCCceeeeeeccccceeEEecccccccccccccccccccccccc
Confidence            778888877766544332110    1112222222333   2344444 899999999999877544310          


Q ss_pred             --------------------------CceeEEEeecC-ceEEEeCC----------------------------------
Q psy7482         186 --------------------------SKVHSVCFLNE-TTVCTGNE----------------------------------  204 (327)
Q Consensus       186 --------------------------~~i~~~~~~~~-~~l~~~~~----------------------------------  204 (327)
                                                ..-..++++|+ +.+++...                                  
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~pg~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  446 (573)
T d1kb0a2         367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF  446 (573)
T ss_dssp             TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred             ccceeeeeeccccccceEEeecccCCccccccccCCCcceEEeeccccceeeecccccccccCCCCcccccccccccccc
Confidence                                      00112355665 44443211                                  


Q ss_pred             ---------CCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecc
Q psy7482         205 ---------ESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKAS  269 (327)
Q Consensus       205 ---------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~  269 (327)
                               -|.+.-||+.+++.+.+.+........ ...  ..+.++++|+.||.++.+|.++|+.+++++..
T Consensus       447 ~~~p~~~~~~G~l~AiD~~tGk~~W~~~~~~p~~gg-~ls--tagglVF~G~~dg~l~A~Da~TGe~LW~~~~~  517 (573)
T d1kb0a2         447 NAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGG-TLT--TAGNVVFQGTADGRLVAYHAATGEKLWEAPTG  517 (573)
T ss_dssp             CSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCC-EEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred             ccCCCCCCCcccEEEeCCCCCceEeeecCCCCCCCc-eEE--EcCCEEEEECCCCeEEEEECCCCcEeEEEECC
Confidence                     135778898899888877543321111 111  46778888999999999999999999998754

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.11  E-value=0.0012  Score=52.27  Aligned_cols=222  Identities=14%  Similarity=0.152  Sum_probs=140.9

Q ss_pred             EEEecCCCeEEEEEccccccccccccc---------------------------------------cccE--EEEEECC-
Q psy7482          27 AASSGADETVVLYDMVKRKQSGALMQH---------------------------------------EGTI--TCLKFTP-   64 (327)
Q Consensus        27 l~~~~~dg~v~~w~~~~~~~~~~~~~~---------------------------------------~~~v--~~~~~~~-   64 (327)
                      |.+|+..|.|+++-+.+++.+..+.-.                                       .+..  ..+.+.. 
T Consensus        16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdG   95 (459)
T d1fwxa2          16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG   95 (459)
T ss_dssp             EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETT
T ss_pred             EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCC
Confidence            668899999999988877654332100                                       0011  1444543 


Q ss_pred             --CCCeEEEec-CCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec--CCCEEEEEeCCC------------------C
Q psy7482          65 --EGSHLISCS-DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDK------------------T  121 (327)
Q Consensus        65 --~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg------------------~  121 (327)
                        ||++|++.. .+..|.+-|++..+..+.+....... +..+...+  +..+++..+++.                  .
T Consensus        96 tyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~-~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~  174 (459)
T d1fwxa2          96 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKG-IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV  174 (459)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCS-EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEE
T ss_pred             ccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCC-CceeecccCCCeEEEEccCccccccCCCCccccchhhcceE
Confidence              688887665 57889999999999877663333333 77766654  556777776532                  2


Q ss_pred             EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec-C--C-------------eEEEEEe------------
Q psy7482         122 LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI-Q--N-------------KAVVFSV------------  173 (327)
Q Consensus       122 i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~--~-------------~i~i~d~------------  173 (327)
                      +..+|..+.+..........      ...+.++++|+++++.+ +  .             .+.+++.            
T Consensus       175 ~t~ID~~tm~V~~QV~V~g~------ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~  248 (459)
T d1fwxa2         175 FTAVDADKWEVAWQVLVSGN------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY  248 (459)
T ss_dssp             EEEEETTTTEEEEEEEESSC------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred             EEEEecCCceEEEEeeeCCC------hhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCc
Confidence            67789988888777776654      67889999999887754 2  1             2333332            


Q ss_pred             -----------cCC---ceeeEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCce------------eEEeeec
Q psy7482         174 -----------EKA---GVLQTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGSH------------LWQIKAS  225 (327)
Q Consensus       174 -----------~~~---~~~~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~------------~~~~~~~  225 (327)
                                 +..   ..+..+.-......+..+|| .+ ++++..+.++.++|++....            ..+.+..
T Consensus       249 ~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elg  328 (459)
T d1fwxa2         249 QELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG  328 (459)
T ss_dssp             EEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCC
T ss_pred             EEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecccC
Confidence                       211   12223333444667889999 44 45666899999999964211            1111111


Q ss_pred             ccceEEEEEEecCCCcEEEEecCCCeEEEEEcC
Q psy7482         226 ASRIKGLVFFSIPQETTVCTGNEESAITAYNLT  258 (327)
Q Consensus       226 ~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~  258 (327)
                       ..-...+|  +..|....+---|..|.-|++.
T Consensus       329 -lgPLht~f--d~~g~aytslfids~v~kw~~~  358 (459)
T d1fwxa2         329 -LGPLHTAF--DGRGNAYTSLFLDSQVVKWNIE  358 (459)
T ss_dssp             -SCEEEEEE--CTTSEEEEEETTTTEEEEEEHH
T ss_pred             -cCcccccc--CCCceEEEEeeccceEEEEecc
Confidence             12344566  4677666677789999999985

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.07  E-value=0.0022  Score=54.07  Aligned_cols=274  Identities=11%  Similarity=0.099  Sum_probs=155.8

Q ss_pred             CCEEEEecCCCeEEEEEcccccccccccccc--------ccE-EEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          24 SKLAASSGADETVVLYDMVKRKQSGALMQHE--------GTI-TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        24 ~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~--------~~v-~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      +..|.+++.++.|.-.|..+|+.+..+....        ..+ ..+++.  +..++.++.|+.+.-.|.++++.+.....
T Consensus        68 ~g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~t~~~~l~alda~tG~~~W~~~~  145 (582)
T d1flga_          68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--GDKVFFGTLDASVVALNKNTGKVVWKKKF  145 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--TTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred             CCEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEe--CCceEEecCCCeEEEecccccceeeeecc
Confidence            4455666778999999999999887653210        001 112222  45677788899999999999988765422


Q ss_pred             cccCC--cee--eEEEec--CCCEEEEEe-------CCCCEEEEEcCCCceeeeeeccccCc------------------
Q psy7482          95 AHKGT--AVN--HISIHP--SGKLALSVG-------KDKTLRTWNLVKGRSAYITNLSSYGV------------------  143 (327)
Q Consensus        95 ~~~~~--~v~--~~~~~~--~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~------------------  143 (327)
                      .....  ...  -....+  .+..++..+       ..+.|.-+|.++|+.+..........                  
T Consensus       146 ~~~~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~d~~~~g~~~~~~  225 (582)
T d1flga_         146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS  225 (582)
T ss_dssp             SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred             cCCCccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEeccCCcccccccccccccccccccc
Confidence            21110  000  011111  133333332       24678899999998877654432100                  


Q ss_pred             ------------------cccceEEEEEccCCcEEEeec-------------------------CCeEEEEEecCCceee
Q psy7482         144 ------------------GFENLDSVVWSPEGLLYAIPI-------------------------QNKAVVFSVEKAGVLQ  180 (327)
Q Consensus       144 ------------------~~~~v~~~~~~~~~~~l~~~~-------------------------~~~i~i~d~~~~~~~~  180 (327)
                                        ....-..+++.+...++..+.                         ...+.-.|.++++...
T Consensus       226 ~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~~~vy~~tgn~~p~~~~~~~~~g~~~~~~dn~ys~SvvAld~~tG~~~W  305 (582)
T d1flga_         226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW  305 (582)
T ss_dssp             SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred             CCCccccccCCccceecCCCcccccceeccccceEEeccCCcccccccccccCCCCcCcccccccceeEEecccchhhhh
Confidence                              000112356666655554421                         1357778889999888


Q ss_pred             Eec---CCC-------c--eeEEEeecC---ceEEEeCCCCcEEEEEcCCCceeEEeeecccce----------------
Q psy7482         181 TLK---SES-------K--VHSVCFLNE---TTVCTGNEESAITAYNLTDGSHLWQIKASASRI----------------  229 (327)
Q Consensus       181 ~~~---~~~-------~--i~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v----------------  229 (327)
                      .++   |.-       .  +..+...+.   ..++..+.++.++++|.++++.+..........                
T Consensus       306 ~~q~~~~D~wd~d~~~~p~l~d~~~~~g~~~~~v~~~~k~g~~~vldr~tG~~i~~~~~~~~~~~~~~~d~~~~~~~~~~  385 (582)
T d1flga_         306 FYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVERE  385 (582)
T ss_dssp             EEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECT
T ss_pred             cccccccccccccccccccccccccccccccceeEeecccccEEeecccCCcccccccccCccccccccccccccceecc
Confidence            776   211       1  222222232   356677889999999998887654321111000                


Q ss_pred             -----------------------------EEEEEEecCCCcEEEEe---------------------------------c
Q psy7482         230 -----------------------------KGLVFFSIPQETTVCTG---------------------------------N  247 (327)
Q Consensus       230 -----------------------------~~~~~~~s~~~~~l~~~---------------------------------~  247 (327)
                                                   ...++  +|+...+...                                 .
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~P~~~gg~~w~~~a~--dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  463 (582)
T d1flga_         386 GQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAY--SQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD  463 (582)
T ss_dssp             TCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEE--CTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred             ccccccccccccccceEEECCCccCCccccccee--cCCCCceeeeccccccccccccccccccccccccCccccccccC
Confidence                                         01112  1333322221                                 1


Q ss_pred             CCCeEEEEEcCCCceeEEeecccCceEE-EeeeCcEEEEEecCCcEEEEEccCcc
Q psy7482         248 EESAITAYNLTDGSHLWHIKASASRIKG-LASHRNHLICITSAGDLVVWELNEDV  301 (327)
Q Consensus       248 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~~~~~dg~v~iw~~~~~~  301 (327)
                      ..|.|.-+|+.+++.+++...+...... ++-...++++|+.||.++.+|.+++.
T Consensus       464 ~~G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe  518 (582)
T d1flga_         464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK  518 (582)
T ss_dssp             CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred             CCCeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCc
Confidence            2367888999999998888755422111 23333788899999999999999993

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.04  E-value=0.0012  Score=52.49  Aligned_cols=155  Identities=9%  Similarity=0.027  Sum_probs=92.1

Q ss_pred             CCCEEEEecCCC-----------eEEEEEcccccccccc---ccccccEEEEEECCCCCeEEEecCC-CcEEEEEcCCCe
Q psy7482          23 TSKLAASSGADE-----------TVVLYDMVKRKQSGAL---MQHEGTITCLKFTPEGSHLISCSDD-GSIAIFRVGSWQ   87 (327)
Q Consensus        23 ~~~~l~~~~~dg-----------~v~~w~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~iw~~~~~~   87 (327)
                      ++++++.|+.+.           .+.+||..+++.....   ..+.......++.+++++++.|+.+ ..+.+||..+..
T Consensus        30 ~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~  109 (387)
T d1k3ia3          30 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS  109 (387)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred             CCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCc
Confidence            888888887431           3779999887654321   1233334456788999999988765 589999998766


Q ss_pred             EEEeEEecccCCceeeEEEecCCCEEEEEeCC------CCEEEEEcCCCceeeeeecccc----Ccc-----ccceEEEE
Q psy7482          88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGRSAYITNLSSY----GVG-----FENLDSVV  152 (327)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~----~~~-----~~~v~~~~  152 (327)
                      ....- .......-...+..+|+++++.++.+      ..+.+||..+.+..........    ..+     ...-..+.
T Consensus       110 w~~~~-~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (387)
T d1k3ia3         110 WIPGP-DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLF  188 (387)
T ss_dssp             EEECC-CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEE
T ss_pred             ccccc-cccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeeccceeEEE
Confidence            54332 21221113456777899998888753      3689999988765332111111    000     00011223


Q ss_pred             EccCCcEEEeec-CCeEEEEEecCCce
Q psy7482         153 WSPEGLLYAIPI-QNKAVVFSVEKAGV  178 (327)
Q Consensus       153 ~~~~~~~l~~~~-~~~i~i~d~~~~~~  178 (327)
                      ..++++.+..+. .+.+..++..+...
T Consensus       189 ~~~~G~~~~~g~~~~~~~~~~~~~~~~  215 (387)
T d1k3ia3         189 GWKKGSVFQAGPSTAMNWYYTSGSGDV  215 (387)
T ss_dssp             ECGGGCEEECCSSSEEEEEECSTTCEE
T ss_pred             EeCCCCEEEecCcCCcEEecCcccCcE
Confidence            344666666664 66677777766543

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.88  E-value=0.0052  Score=51.76  Aligned_cols=62  Identities=19%  Similarity=0.425  Sum_probs=46.7

Q ss_pred             CcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeeccc
Q psy7482         206 SAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASA  270 (327)
Q Consensus       206 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~  270 (327)
                      |.+.-+|+.+++.+.+.+.+.. ...-...  ..+.++++|+.||.++.+|.++|+.+++++...
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p-~~~g~ls--tagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~  527 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLP-LWAGVLA--TAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS  527 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSC-CCSCCEE--ETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred             CeEEEEcCCCCcEEeecCCCCC-CccceeE--EcCCeEEEeCCCCeEEEEECCCCcEeEEEECCC
Confidence            6788899999998888765432 2221121  467788889999999999999999999988543

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=0.0026  Score=47.66  Aligned_cols=214  Identities=10%  Similarity=0.040  Sum_probs=126.3

Q ss_pred             CccEEEEEe--CCCEEE-EecCCCeEEEEEccccc----cccccccccccEEEEEECCCCCeEE-EecCCCcEEEEEcCC
Q psy7482          14 TASVRSVAA--TSKLAA-SSGADETVVLYDMVKRK----QSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGS   85 (327)
Q Consensus        14 ~~~v~~~~~--~~~~l~-~~~~dg~v~~w~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iw~~~~   85 (327)
                      ...+.+|+|  ..+.|. +-..++.|.--++....    ....+......+..+++.+.+..|. +-...+.|.+.++..
T Consensus        29 ~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g  108 (266)
T d1ijqa1          29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG  108 (266)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeEecCC
Confidence            345667777  344444 44456667666654321    1111222234466788876555554 445567899999986


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEe--CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEee
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIP  163 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  163 (327)
                      ......+ ...... ...++++|...+|+...  ..+.|.-.++.......... ..    ......+++.+.++.|..+
T Consensus       109 ~~~~~~~-~~~~~~-P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~-~~----~~~p~gl~iD~~~~~lYw~  181 (266)
T d1ijqa1         109 VKRKTLF-RENGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-EN----IQWPNGITLDLLSGRLYWV  181 (266)
T ss_dssp             SSEEEEE-ECTTCC-EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-SS----CSCEEEEEEETTTTEEEEE
T ss_pred             ceEEEEE-cCCCCC-cceEEEEcccCeEEEeccCCCcceeEeccCCCceecccc-cc----cceeeEEEeeccccEEEEe
Confidence            6554444 444445 78999999666666544  33456666765443322221 11    1227889999877766555


Q ss_pred             c--CCeEEEEEecCCceeeEec---CCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEE
Q psy7482         164 I--QNKAVVFSVEKAGVLQTLK---SESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVF  234 (327)
Q Consensus       164 ~--~~~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~  234 (327)
                      .  .+.|...++..........   ......++++..+..+++-..++.|...+..+++....+......+..+..
T Consensus       182 d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~~g~~~~~~~~~~~~p~~i~v  257 (266)
T d1ijqa1         182 DSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL  257 (266)
T ss_dssp             ETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEE
T ss_pred             cCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEECCEEEEEECCCCeEEEEECCCCcceEEEEcCCCCceEEEE
Confidence            3  7899999986654433332   223466788876666777677888888888887766665544443444443

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=0.0037  Score=46.85  Aligned_cols=232  Identities=7%  Similarity=-0.023  Sum_probs=136.8

Q ss_pred             CeEEEEEccccccccccccccccEEEEEECCCCCeEEEec-CCCcEEEEEcCCCe---EEEeEEecccCCceeeEEEecC
Q psy7482          34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVGSWQ---LEKLFKKAHKGTAVNHISIHPS  109 (327)
Q Consensus        34 g~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iw~~~~~~---~~~~~~~~~~~~~v~~~~~~~~  109 (327)
                      ..|+-.++.+......+. ....+.+++|.+..+.|.-.. .++.|.--++....   ....+....... +..+++.+.
T Consensus        10 ~~I~~~~l~~~~~~~~~~-~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~-p~glAvD~~   87 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA-PDGLAVDWI   87 (266)
T ss_dssp             SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC-CCEEEEETT
T ss_pred             CeEEEEECCCCcceeeeC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCC-cceEEEeec
Confidence            348888887654333333 445678899998777776554 45666666654321   112221222233 778999886


Q ss_pred             CCEEEEEe-CCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCeEEEEEecCCceeeEec-C
Q psy7482         110 GKLALSVG-KDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNKAVVFSVEKAGVLQTLK-S  184 (327)
Q Consensus       110 ~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~i~i~d~~~~~~~~~~~-~  184 (327)
                      +..|+.+. ..+.|.+.++............     ......++.+|...++....   .+.|...++.......... .
T Consensus        88 ~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~-----~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~  162 (266)
T d1ijqa1          88 HSNIYWTDSVLGTVSVADTKGVKRKTLFREN-----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN  162 (266)
T ss_dssp             TTEEEEEETTTTEEEEEETTSSSEEEEEECT-----TCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS
T ss_pred             cceEEEEecCCCEEEeEecCCceEEEEEcCC-----CCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceecccccc
Confidence            66666554 5578999998765443332221     12378899998655544432   4567777765544444333 3


Q ss_pred             CCceeEEEeecC-c-eEEEeCCCCcEEEEEcCCCceeEEeeec--ccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCC
Q psy7482         185 ESKVHSVCFLNE-T-TVCTGNEESAITAYNLTDGSHLWQIKAS--ASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDG  260 (327)
Q Consensus       185 ~~~i~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~  260 (327)
                      -..+..+++.+. + ++++-...+.|...++............  .....++++.   ++....+-..++.|...+..++
T Consensus       163 ~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~---~~~ly~td~~~~~I~~~~~~~g  239 (266)
T d1ijqa1         163 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF---EDKVFWTDIINEAIFSANRLTG  239 (266)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE---TTEEEEEETTTTEEEEEETTTC
T ss_pred             cceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE---CCEEEEEECCCCeEEEEECCCC
Confidence            356789999986 4 4555577789999998654433222222  2335677773   4555566567788888888787


Q ss_pred             ceeEEeecccCceEE
Q psy7482         261 SHLWHIKASASRIKG  275 (327)
Q Consensus       261 ~~~~~~~~~~~~v~~  275 (327)
                      +....+......+.+
T Consensus       240 ~~~~~~~~~~~~p~~  254 (266)
T d1ijqa1         240 SDVNLLAENLLSPED  254 (266)
T ss_dssp             CCCEEEECSCSCCCC
T ss_pred             cceEEEEcCCCCceE
Confidence            766555544333333

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.75  E-value=0.004  Score=46.56  Aligned_cols=249  Identities=12%  Similarity=0.121  Sum_probs=147.2

Q ss_pred             CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCC
Q psy7482          32 ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK  111 (327)
Q Consensus        32 ~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  111 (327)
                      ...+|.|-|+.+......-.   -..-+.-.+|..+.||.-+ ..++.++|+++.+.++.+ .-.. . |.--.|-.+ +
T Consensus        43 ~~~~VvIidl~n~~~~~Rrp---i~AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~-~~~e-~-VvfWkWis~-~  114 (327)
T d1utca2          43 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH-TMTD-D-VTFWKWISL-N  114 (327)
T ss_dssp             TEEEEEEEETTSTTSCEEEE---CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEE-ECSS-C-CCEEEESSS-S
T ss_pred             CCceEEEEECCCCCcceecc---cchhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceE-EcCC-C-cEEEEecCC-C
Confidence            34578899987665332211   1122344678888887666 458999999999988887 3333 3 766677654 4


Q ss_pred             EEEEEeCCCCEEEEEcCCCc-eeeeeeccccCccccceEEEEEccCCcEEEeec--------CCeEEEEEecCCceeeEe
Q psy7482         112 LALSVGKDKTLRTWNLVKGR-SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--------QNKAVVFSVEKAGVLQTL  182 (327)
Q Consensus       112 ~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~~~i~i~d~~~~~~~~~~  182 (327)
                      .|+..+. ..|+-|+++... +...+.... ......|..-..+++.++++..+        .|.+.+|..+.+.. +.+
T Consensus       115 ~L~lVT~-taVYHW~~~g~s~P~k~fdR~~-~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~s-Q~i  191 (327)
T d1utca2         115 TVALVTD-NAVYHWSMEGESQPVKMFDRHS-SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPI  191 (327)
T ss_dssp             EEEEECS-SEEEEEESSSSCCCEEEEECCG-GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEE-EEE
T ss_pred             EEEEEcC-CceEEEcccCCCCchhhhhhcc-cccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcC-ccc
Confidence            5655554 579999996433 333333222 22234577788888998776532        36788998775532 222


Q ss_pred             c-CCCceeEEEeecC----ceEEE---eCCCCcEEEEEcCCCc---ee-----EEe--e--ecccceEEEEEEecCCCcE
Q psy7482         183 K-SESKVHSVCFLNE----TTVCT---GNEESAITAYNLTDGS---HL-----WQI--K--ASASRIKGLVFFSIPQETT  242 (327)
Q Consensus       183 ~-~~~~i~~~~~~~~----~~l~~---~~~d~~i~i~d~~~~~---~~-----~~~--~--~~~~~v~~~~~~~s~~~~~  242 (327)
                      + |.+....+.+..+    ..++.   +...+.+++.++....   ..     ..+  .  ...+-..++..  ++.-..
T Consensus       192 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqv--s~kygi  269 (327)
T d1utca2         192 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI--SEKHDV  269 (327)
T ss_dssp             CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEE--ETTTTE
T ss_pred             cceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEe--eccCCE
Confidence            2 3222222222111    12221   2344678888875421   10     111  1  11222345555  377778


Q ss_pred             EEEecCCCeEEEEEcCCCceeEEeecccCceEEEeeeC--cEEEEEecCCcEE
Q psy7482         243 VCTGNEESAITAYNLTDGSHLWHIKASASRIKGLASHR--NHLICITSAGDLV  293 (327)
Q Consensus       243 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~v~  293 (327)
                      +..-+.-|.|++||+.++.++..-+-..++|..-+-+.  .=+++...+|.|.
T Consensus       270 iyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         270 VFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEE
T ss_pred             EEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEEECCCCeEE
Confidence            88888899999999999999887776666666444444  4555555666654

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.54  E-value=0.0086  Score=44.75  Aligned_cols=218  Identities=13%  Similarity=0.157  Sum_probs=132.7

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCC-eEEEeEEeccc---C
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-QLEKLFKKAHK---G   98 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~---~   98 (327)
                      ..+.||.-+ ..++.++|+++.+.+..+.- ..+|.-=.|-.+ +.|+..+.. .|+-|+++.. ++.+.+ ..|.   +
T Consensus        73 ~~~IiALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~-~~L~lVT~t-aVYHW~~~g~s~P~k~f-dR~~~L~~  147 (327)
T d1utca2          73 ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL-NTVALVTDN-AVYHWSMEGESQPVKMF-DRHSSLAG  147 (327)
T ss_dssp             SSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEESSS-SEEEEECSS-EEEEEESSSSCCCEEEE-ECCGGGTT
T ss_pred             CCcEEEEec-CCeEEEEehhHhhhhceEEc-CCCcEEEEecCC-CEEEEEcCC-ceEEEcccCCCCchhhh-hhcccccC
Confidence            455666544 56899999999988877763 456766777744 456655544 7999999543 455555 3332   2


Q ss_pred             CceeeEEEecCCCEEEEEeC-------CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccC---CcEEEeec----
Q psy7482          99 TAVNHISIHPSGKLALSVGK-------DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPE---GLLYAIPI----  164 (327)
Q Consensus        99 ~~v~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~----  164 (327)
                      ..|..-..+++.++++..+-       .|.+.+|..+.+... .  +.++   ......+....+   .++++.+.    
T Consensus       148 ~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ-~--ieGh---aa~F~~~~~~g~~~~~~lf~fa~r~~~  221 (327)
T d1utca2         148 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ-P--IEGH---AASFAQFKMEGNAEESTLFCFAVRGQA  221 (327)
T ss_dssp             CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE-E--ECCS---EEEEEEECCTTCSSCEEEEEEEEEETT
T ss_pred             ceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCc-c--ccce---eeeeEEEEcCCCCCCceEEEEEECCCC
Confidence            33666667778887765441       367888987754321 1  2222   101111111111   12444432    


Q ss_pred             CCeEEEEEecCCc---e---ee--Eec-----CCCceeEEEeecC-ceEEEeCCCCcEEEEEcCCCceeEEeeecccceE
Q psy7482         165 QNKAVVFSVEKAG---V---LQ--TLK-----SESKVHSVCFLNE-TTVCTGNEESAITAYNLTDGSHLWQIKASASRIK  230 (327)
Q Consensus       165 ~~~i~i~d~~~~~---~---~~--~~~-----~~~~i~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~  230 (327)
                      .+.+.+.++....   .   .+  .+.     ..+-..++..++. +.+..-+.-|.+++||+.++.++..-+-...+|.
T Consensus       222 ~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF  301 (327)
T d1utca2         222 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIF  301 (327)
T ss_dssp             EEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred             CcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceE
Confidence            3688888876521   1   11  111     2455678888887 8999999999999999999999887776667776


Q ss_pred             EEEEEecCCCcEEEEecCCCeEE
Q psy7482         231 GLVFFSIPQETTVCTGNEESAIT  253 (327)
Q Consensus       231 ~~~~~~s~~~~~l~~~~~d~~i~  253 (327)
                      ..+-.  .+..-+++-..+|.|.
T Consensus       302 ~~a~~--~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         302 VTAPH--EATAGIIGVNRKGQVL  322 (327)
T ss_dssp             EEEEE--TTTTEEEEEETTSEEE
T ss_pred             EeccC--CCCceEEEECCCCeEE
Confidence            55443  3433344444666654

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.19  E-value=0.032  Score=43.81  Aligned_cols=158  Identities=9%  Similarity=0.045  Sum_probs=92.6

Q ss_pred             eeeEEEecCCCEEEEEeCCC-----------CEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec--CCe
Q psy7482         101 VNHISIHPSGKLALSVGKDK-----------TLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNK  167 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~  167 (327)
                      +.......+++.++.|+.+.           .+.+||+.+++............  ......++.+++++++.|.  ...
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~--~~~~~~~~~~~g~i~v~Gg~~~~~   99 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD--MFCPGISMDGNGQIVVTGGNDAKK   99 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC--CSSCEEEECTTSCEEEECSSSTTC
T ss_pred             cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcc--cceeEEEEecCCcEEEeecCCCcc
Confidence            33334445788888777421           26789999887654332222111  1134567889999999886  468


Q ss_pred             EEEEEecCCceeeEec--CCCceeEEEeecC-ceEEEeCCC------CcEEEEEcCCCceeEE--ee-------ecccc-
Q psy7482         168 AVVFSVEKAGVLQTLK--SESKVHSVCFLNE-TTVCTGNEE------SAITAYNLTDGSHLWQ--IK-------ASASR-  228 (327)
Q Consensus       168 i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~-~~l~~~~~d------~~i~i~d~~~~~~~~~--~~-------~~~~~-  228 (327)
                      +.+||..+..-...-.  ....-...+..+| ..++.|+.+      ..+.+||..+.+-...  ..       .+... 
T Consensus       100 ~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~  179 (387)
T d1k3ia3         100 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY  179 (387)
T ss_dssp             EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred             eeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCccccccccccccee
Confidence            9999998765433221  2333345666677 566666532      3689999877642111  00       00000 


Q ss_pred             ---eEEEEEEecCCCcEEEEecCCCeEEEEEcCCCc
Q psy7482         229 ---IKGLVFFSIPQETTVCTGNEESAITAYNLTDGS  261 (327)
Q Consensus       229 ---v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~  261 (327)
                         -....+. .++|+.+..+..++.+.+++..+..
T Consensus       180 ~~~~~~~~~~-~~~G~~~~~g~~~~~~~~~~~~~~~  214 (387)
T d1k3ia3         180 RSDNHAWLFG-WKKGSVFQAGPSTAMNWYYTSGSGD  214 (387)
T ss_dssp             TTTCSCCEEE-CGGGCEEECCSSSEEEEEECSTTCE
T ss_pred             eccceeEEEE-eCCCCEEEecCcCCcEEecCcccCc
Confidence               0111222 2678888888888888888877665

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=97.06  E-value=0.04  Score=42.56  Aligned_cols=198  Identities=12%  Similarity=0.226  Sum_probs=113.2

Q ss_pred             CCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEec----CC--CEEEEEe-CC---CCEEEEEcCCC-cee
Q psy7482          65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP----SG--KLALSVG-KD---KTLRTWNLVKG-RSA  133 (327)
Q Consensus        65 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~--~~l~~~~-~d---g~i~iwd~~~~-~~~  133 (327)
                      +..+++....++-|.+||+. |+.+..+ .  .+. ++.+..-.    ++  .-++.++ ++   .+|.+|.+... ..+
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~~~-~--~Gr-~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l  113 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLE-GKMLHSY-H--TGK-LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL  113 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETT-CCEEEEC-C--SSC-EEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEE
T ss_pred             CccEEEEEcCcCCEEEEcCC-CcEEEec-c--cCC-cCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCccccc
Confidence            34566666667779999985 7777666 2  223 55555432    22  2344444 22   25777877532 122


Q ss_pred             eeeecccc--CccccceEEEEE--ccC-CcEEEe-ec-CCeEEEEEec---CC----ceeeEecCCCceeEEEeecC-ce
Q psy7482         134 YITNLSSY--GVGFENLDSVVW--SPE-GLLYAI-PI-QNKAVVFSVE---KA----GVLQTLKSESKVHSVCFLNE-TT  198 (327)
Q Consensus       134 ~~~~~~~~--~~~~~~v~~~~~--~~~-~~~l~~-~~-~~~i~i~d~~---~~----~~~~~~~~~~~i~~~~~~~~-~~  198 (327)
                      ..+.....  ......+..+|+  ++. +.+.+. .. +|.+..|.+.   .+    +.++.+.....+..+.+.++ +.
T Consensus       114 ~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~  193 (353)
T d1h6la_         114 QSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGS  193 (353)
T ss_dssp             EECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred             ccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCc
Confidence            21111111  001122556665  664 444333 33 7888888763   22    34556667788999999988 88


Q ss_pred             EEEeCCCCcEEEEEcCCC-----ceeEEeee--cccceEEEEEEecCC--CcEEEEecCCCeEEEEEcCCC-ceeEEee
Q psy7482         199 VCTGNEESAITAYNLTDG-----SHLWQIKA--SASRIKGLVFFSIPQ--ETTVCTGNEESAITAYNLTDG-SHLWHIK  267 (327)
Q Consensus       199 l~~~~~d~~i~i~d~~~~-----~~~~~~~~--~~~~v~~~~~~~s~~--~~~l~~~~~d~~i~i~d~~~~-~~~~~~~  267 (327)
                      |+.+-++..+..++....     ..+....+  ....+..|+.....+  |-+|++.-.+++..+||.... +.+..+.
T Consensus       194 LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F~  272 (353)
T d1h6la_         194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADFQ  272 (353)
T ss_dssp             EEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred             EEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceEE
Confidence            999988877777765421     12222211  345678888764333  334445555788999998764 5555553

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.1  Score=38.87  Aligned_cols=216  Identities=11%  Similarity=0.097  Sum_probs=101.3

Q ss_pred             CeEEEEEcccccc--ccccccccccEEEEEECCCCCeEEEecC---------CCcEEEEEcCCCeEEEeEEecccCCcee
Q psy7482          34 ETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSD---------DGSIAIFRVGSWQLEKLFKKAHKGTAVN  102 (327)
Q Consensus        34 g~v~~w~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~iw~~~~~~~~~~~~~~~~~~~v~  102 (327)
                      ..+.+||+.+++-  +..+......-..+..  +++.++.|+.         -..+.+||..+.+....- ...... -.
T Consensus        19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~-~~p~~r-~~   94 (288)
T d1zgka1          19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA-PMSVPR-NR   94 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC-CCSSCC-BT
T ss_pred             ceEEEEECCCCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccc-ccccee-cc
Confidence            3588999988653  2223221112222222  4566666653         135778888765544322 111111 11


Q ss_pred             eEEEecCCCEEEEEeCCCC-----EEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec------CCeEEEE
Q psy7482         103 HISIHPSGKLALSVGKDKT-----LRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI------QNKAVVF  171 (327)
Q Consensus       103 ~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~~~i~i~  171 (327)
                      ..+...+++.++.++.++.     ...+|..+............   .... ++... ++.+++.|.      ...+..|
T Consensus        95 ~~~~~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---r~~~-~~~~~-~~~~~~~GG~~~~~~~~~~~~~  169 (288)
T d1zgka1          95 IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR---RIGV-GVAVL-NRLLYAVGGFDGTNRLNSAECY  169 (288)
T ss_dssp             CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC---CBSC-EEEEE-TTEEEEECCBCSSCBCCCEEEE
T ss_pred             eeccccceeeEEecceecccccceeeeeccccCccccccccccc---cccc-eeeee-eecceEecCcccccccceEEEe
Confidence            1122235666665554333     44566665543322211111   1111 22222 344444443      2457788


Q ss_pred             EecCCceeeEec--CCCceeEEEeecCceEEEeCCC-----CcEEEEEcCCCceeEEeeecccce-EEEEEEecCCCcEE
Q psy7482         172 SVEKAGVLQTLK--SESKVHSVCFLNETTVCTGNEE-----SAITAYNLTDGSHLWQIKASASRI-KGLVFFSIPQETTV  243 (327)
Q Consensus       172 d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~s~~~~~l  243 (327)
                      |..+.+....-.  ....-.+.....+..++.|+.+     .....+|..+.+....-....... .+++.   .+++++
T Consensus       170 d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~---~~~~l~  246 (288)
T d1zgka1         170 YPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV---HQGRIY  246 (288)
T ss_dssp             ETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE---ETTEEE
T ss_pred             eccccccccccccccccccccccceeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEE---ECCEEE
Confidence            877654332221  2222334444455566665533     346777876654322111111111 23333   467888


Q ss_pred             EEecCCC-----eEEEEEcCCCc
Q psy7482         244 CTGNEES-----AITAYNLTDGS  261 (327)
Q Consensus       244 ~~~~~d~-----~i~i~d~~~~~  261 (327)
                      +.|+.++     .+.+||+.+.+
T Consensus       247 v~GG~~~~~~~~~v~~yd~~~~~  269 (288)
T d1zgka1         247 VLGGYDGHTFLDSVECYDPDTDT  269 (288)
T ss_dssp             EECCBCSSCBCCEEEEEETTTTE
T ss_pred             EEecCCCCeecceEEEEECCCCE
Confidence            8877554     37888887754

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.76  E-value=0.29  Score=37.60  Aligned_cols=178  Identities=13%  Similarity=0.102  Sum_probs=98.0

Q ss_pred             EEEe--CCCEEEEecC------------CCeEEEEEcccccccc-ccc--cc-----cccEEEEEE--CCCCC-eEEEe-
Q psy7482          19 SVAA--TSKLAASSGA------------DETVVLYDMVKRKQSG-ALM--QH-----EGTITCLKF--TPEGS-HLISC-   72 (327)
Q Consensus        19 ~~~~--~~~~l~~~~~------------dg~v~~w~~~~~~~~~-~~~--~~-----~~~v~~~~~--~~~~~-~l~~~-   72 (327)
                      .|..  +|..+++++.            .|.+.++|+.+.+... .+.  +.     .-....+..  .++++ +|++. 
T Consensus        39 Di~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vvn  118 (340)
T d1v04a_          39 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN  118 (340)
T ss_dssp             EEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred             eEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEEe
Confidence            3444  6666655532            4889999987653221 111  10     011233332  44555 34443 


Q ss_pred             --cCCCcEEEEEcCCC--eEE--EeEEecccCCceeeEEEecCCCEEEEEeC---------------CCCEEEEEcCCCc
Q psy7482          73 --SDDGSIAIFRVGSW--QLE--KLFKKAHKGTAVNHISIHPSGKLALSVGK---------------DKTLRTWNLVKGR  131 (327)
Q Consensus        73 --~~d~~i~iw~~~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~~  131 (327)
                        ....+|.++++...  +..  ..+....... .+.+.+..++.+++|-..               -+.-.+|....++
T Consensus       119 H~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~-pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~  197 (340)
T d1v04a_         119 HPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPS-VNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND  197 (340)
T ss_dssp             CSTTCCEEEEEEEETTTTEEEEEEEECCTTCSS-EEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSC
T ss_pred             ccCCCceeEEEEEeCCCCeEEEEeecCCccccC-ccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCc
Confidence              34567888887532  222  2231122233 788999988887777321               1233444444443


Q ss_pred             eeeeeeccccCccccceEEEEEccCCcEEEeec--CCeEEEEEecCCceee---EecCCCceeEEEeecC-ceEEEeC
Q psy7482         132 SAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI--QNKAVVFSVEKAGVLQ---TLKSESKVHSVCFLNE-TTVCTGN  203 (327)
Q Consensus       132 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~i~i~d~~~~~~~~---~~~~~~~i~~~~~~~~-~~l~~~~  203 (327)
                      ......--      ...+.++++|+++++.++.  .+.|+.|++.......   .......+-.+.+.++ +.++++.
T Consensus       198 ~~~~~~~l------~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         198 VRVVAEGF------DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             EEEEEEEE------SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             eEEEcCCC------CccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            32222211      2288999999998887775  7899999987544322   2235566777777764 5555554

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.74  E-value=0.29  Score=37.56  Aligned_cols=159  Identities=12%  Similarity=0.092  Sum_probs=90.2

Q ss_pred             EEEEEECCCCCeEEEecC------------CCcEEEEEcCCCeEEE-eEE-eccc----CCceeeEEE--ecCCC-EEEE
Q psy7482          57 ITCLKFTPEGSHLISCSD------------DGSIAIFRVGSWQLEK-LFK-KAHK----GTAVNHISI--HPSGK-LALS  115 (327)
Q Consensus        57 v~~~~~~~~~~~l~~~~~------------d~~i~iw~~~~~~~~~-~~~-~~~~----~~~v~~~~~--~~~~~-~l~~  115 (327)
                      ...++..|+|..+++++.            .|.|.++|+.+.+... .+. .+..    .-....+..  .++++ +|++
T Consensus        37 ~EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~v  116 (340)
T d1v04a_          37 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  116 (340)
T ss_dssp             CCEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             cceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEE
Confidence            345777888877766542            4889999987653322 110 1110    001344444  33454 3444


Q ss_pred             Ee---CCCCEEEEEcCCCce--eeeeeccccCccccceEEEEEccCCcEEEeec----C------------CeEEEEEec
Q psy7482         116 VG---KDKTLRTWNLVKGRS--AYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----Q------------NKAVVFSVE  174 (327)
Q Consensus       116 ~~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~------------~~i~i~d~~  174 (327)
                      ..   ...+|.+|++.....  .........  .....+++.+..++.++++-.    .            +.-.+|...
T Consensus       117 vnH~~~~~~ieif~~~~~~~~l~~~~~v~~~--~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~  194 (340)
T d1v04a_         117 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK--LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS  194 (340)
T ss_dssp             EECSTTCCEEEEEEEETTTTEEEEEEEECCT--TCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEEC
T ss_pred             EeccCCCceeEEEEEeCCCCeEEEEeecCCc--cccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEc
Confidence            43   345688888754332  222222211  123378999999998888721    1            233444444


Q ss_pred             CCceeeEecCCCceeEEEeecC-ce-EEEeCCCCcEEEEEcCCCc
Q psy7482         175 KAGVLQTLKSESKVHSVCFLNE-TT-VCTGNEESAITAYNLTDGS  217 (327)
Q Consensus       175 ~~~~~~~~~~~~~i~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~  217 (327)
                      .++.......-...+.++++|| ++ +++-+..+.|+.|++....
T Consensus       195 ~~~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~  239 (340)
T d1v04a_         195 PNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANW  239 (340)
T ss_dssp             SSCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             CCceEEEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCc
Confidence            4444333344567889999998 44 5566778899999987544

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.72  E-value=0.36  Score=38.41  Aligned_cols=242  Identities=12%  Similarity=0.064  Sum_probs=128.3

Q ss_pred             ccccEEEEEECCCCCeEEEe-----cCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeCC--------
Q psy7482          53 HEGTITCLKFTPEGSHLISC-----SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD--------  119 (327)
Q Consensus        53 ~~~~v~~~~~~~~~~~l~~~-----~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------  119 (327)
                      +.-.+...+++|++++++.+     +....+++.|+.+++.+... .... . ...+.|.+|++.|+....+        
T Consensus       123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~-i~~~-~-~~~~~W~~D~~~~~Y~~~~~~~~~~~~  199 (430)
T d1qfma1         123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LERV-K-FSCMAWTHDGKGMFYNAYPQQDGKSDG  199 (430)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEEE-C-SCCEEECTTSSEEEEEECCCCSSCCSS
T ss_pred             ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceecccc-cccc-c-ccceEEcCCCCEEEEEEeccccCcccc
Confidence            33345567889999988843     22346999999999876533 1111 1 3568899999887765432        


Q ss_pred             --------CCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec----CCe--EEEEEecCCce-------
Q psy7482         120 --------KTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----QNK--AVVFSVEKAGV-------  178 (327)
Q Consensus       120 --------g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~~~--i~i~d~~~~~~-------  178 (327)
                              ..+..+.+.+............ .....+..+..++++++++...    .+.  +.+.|+.....       
T Consensus       200 ~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~-d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  278 (430)
T d1qfma1         200 TETSTNLHQKLYYHVLGTDQSEDILCAEFP-DEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK  278 (430)
T ss_dssp             SCCCCCCCCEEEEEETTSCGGGCEEEECCT-TCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred             cccccCCcceEEEEECCCCccccccccccc-cCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccc
Confidence                    2477777776544333322221 1112366777899998776432    333  44555443211       


Q ss_pred             -eeEec-CCCceeEEEeecCceEEEeC---CCCcEEEEEcCCCce--eEEe-eecccceEEEEEEecCCCcEEE-EecCC
Q psy7482         179 -LQTLK-SESKVHSVCFLNETTVCTGN---EESAITAYNLTDGSH--LWQI-KASASRIKGLVFFSIPQETTVC-TGNEE  249 (327)
Q Consensus       179 -~~~~~-~~~~i~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~--~~~~-~~~~~~v~~~~~~~s~~~~~l~-~~~~d  249 (327)
                       ..... ......-+....+.+++...   .++.|...++.+...  ...+ ..+...+..-.+.  ..+.+|+ ....+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~--~~~~~lvl~~~~~  356 (430)
T d1qfma1         279 WVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVAC--VRSNFLVLCYLHD  356 (430)
T ss_dssp             CEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEE--ETTTEEEEEEEET
T ss_pred             eeEeecccccceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEE--EECCEEEEEEEcC
Confidence             11222 12223323322233333322   346666677665432  1222 3344434332222  3344444 44455


Q ss_pred             C--eEEEEEcCCCceeEEeecccCceEEEeeeC---cEEEEEec---CCcEEEEEccCc
Q psy7482         250 S--AITAYNLTDGSHLWHIKASASRIKGLASHR---NHLICITS---AGDLVVWELNED  300 (327)
Q Consensus       250 ~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~---dg~v~iw~~~~~  300 (327)
                      +  .|+++++.++..........+.+..+...+   .+.++.++   =.++.-+|+.++
T Consensus       357 ~~~~l~v~~~~~~~~~~~~~~~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~  415 (430)
T d1qfma1         357 VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE  415 (430)
T ss_dssp             TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred             CEeEEEEEECCCCcEEEecCCCCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCC
Confidence            4  588999988876555444445565554444   33333322   155777888776

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.68  E-value=0.33  Score=37.76  Aligned_cols=176  Identities=7%  Similarity=0.006  Sum_probs=92.5

Q ss_pred             EEEEEe--CCCEEEEecCCCeEEEEEcccccc---------ccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCC
Q psy7482          17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQ---------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS   85 (327)
Q Consensus        17 v~~~~~--~~~~l~~~~~dg~v~~w~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~   85 (327)
                      ..-++.  ...+++.|+.++ ++|-..+.-+.         .......-..|..++|+.+  .|+.. .++.+..++...
T Consensus        39 ~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~ip~v~~vafs~d--~l~v~-~~~~l~~~~~~~  114 (381)
T d1xipa_          39 LQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCFHGD--QVLVS-TRNALYSLDLEE  114 (381)
T ss_dssp             CBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEEETT--EEEEE-ESSEEEEEESSS
T ss_pred             cceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccCCCCeEEEEeeCC--EEEEE-eCCCEEEEEeec
Confidence            444555  455677777664 66766432110         0111111235888999744  45554 345688888765


Q ss_pred             CeEEEeEEecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecC
Q psy7482          86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQ  165 (327)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  165 (327)
                      -...... ...... +..+.++|.  .++....+|.+.++++..++..........-.-...+.+++|++.+..++++.+
T Consensus       115 l~~~~~~-~~~~~~-~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g  190 (381)
T d1xipa_         115 LSEFRTV-TSFEKP-VFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWRN  190 (381)
T ss_dssp             TTCEEEE-EECSSC-EEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEEEET
T ss_pred             ccccccc-cccccc-ccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEEeCC
Confidence            4333332 222333 777887765  566677789999999988764332211000000123777778777777766643


Q ss_pred             CeEEEE-EecCCceeeE-ecCCCceeEEEeecCceEE
Q psy7482         166 NKAVVF-SVEKAGVLQT-LKSESKVHSVCFLNETTVC  200 (327)
Q Consensus       166 ~~i~i~-d~~~~~~~~~-~~~~~~i~~~~~~~~~~l~  200 (327)
                      +...+- ++.....+.. ......+.++.|..+..++
T Consensus       191 ~~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~F~  227 (381)
T d1xipa_         191 GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFL  227 (381)
T ss_dssp             TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEE
T ss_pred             CceeeccCCCCccccCCCcCCCcceeEEEEecCceEE
Confidence            332221 1111111100 0134568899998774443

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=95.58  E-value=0.34  Score=37.24  Aligned_cols=181  Identities=15%  Similarity=0.242  Sum_probs=107.1

Q ss_pred             CCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEc------cCCcEEEeecC-----CeEEEEEecC-C
Q psy7482         109 SGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWS------PEGLLYAIPIQ-----NKAVVFSVEK-A  176 (327)
Q Consensus       109 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~------~~~~~l~~~~~-----~~i~i~d~~~-~  176 (327)
                      +..+++.....+-|.+||+. |+.+.......       ++.+..-      .....++++++     ..|.+|.+.. .
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~~Gr-------~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~  110 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLE-GKMLHSYHTGK-------LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN  110 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETT-CCEEEECCSSC-------EEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTT
T ss_pred             CccEEEEEcCcCCEEEEcCC-CcEEEecccCC-------cCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcc
Confidence            45577777777779999985 77766543321       4444332      23334555542     3687887753 3


Q ss_pred             ceeeEec--------CCCceeEEEe--ecC-c--eEEEeCCCCcEEEEEcC---CC----ceeEEeeecccceEEEEEEe
Q psy7482         177 GVLQTLK--------SESKVHSVCF--LNE-T--TVCTGNEESAITAYNLT---DG----SHLWQIKASASRIKGLVFFS  236 (327)
Q Consensus       177 ~~~~~~~--------~~~~i~~~~~--~~~-~--~l~~~~~d~~i~i~d~~---~~----~~~~~~~~~~~~v~~~~~~~  236 (327)
                      ..+..+.        ....+..+|+  ++. +  ++++...+|.+..|.+.   ++    +.++++.. ...+..+.+. 
T Consensus       111 ~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~-~~q~EGCVvD-  188 (353)
T d1h6la_         111 GTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKM-NSQTEGMAAD-  188 (353)
T ss_dssp             TEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEEC-SSCEEEEEEE-
T ss_pred             cccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCC-CCccceEEEe-
Confidence            3333332        1234667777  554 3  56677888999888763   22    23444543 3457788884 


Q ss_pred             cCCCcEEEEecCCCeEEEEEcCC-----CceeEEeec--ccCceEEEeeeC-----cEEE-EEecCCcEEEEEccCc
Q psy7482         237 IPQETTVCTGNEESAITAYNLTD-----GSHLWHIKA--SASRIKGLASHR-----NHLI-CITSAGDLVVWELNED  300 (327)
Q Consensus       237 s~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~--~~~~v~~~~~~~-----~~l~-~~~~dg~v~iw~~~~~  300 (327)
                       .....|..+-++..|..++...     +..+....+  ....+..|+.-.     .+|+ |.-.+++..+||....
T Consensus       189 -de~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~  264 (353)
T d1h6la_         189 -DEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQ  264 (353)
T ss_dssp             -TTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred             -CCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCC
Confidence             7778888888877776666542     122322222  245677777543     3444 4446788999998765

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.19  E-value=0.38  Score=35.47  Aligned_cols=224  Identities=11%  Similarity=0.095  Sum_probs=106.3

Q ss_pred             cEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCEEEEEeC---------CCCEEEEEcCCCceeeeeeccccCccccc
Q psy7482          77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK---------DKTLRTWNLVKGRSAYITNLSSYGVGFEN  147 (327)
Q Consensus        77 ~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  147 (327)
                      .+.+||+.+++-...- ...... -......-+++.++.|+.         -..+.+||..+.+....-..+....   .
T Consensus        20 ~~~~yd~~t~~W~~~~-~~p~~R-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~---~   94 (288)
T d1zgka1          20 YLEAYNPSNGTWLRLA-DLQVPR-SGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRN---R   94 (288)
T ss_dssp             CEEEEETTTTEEEECC-CCSSCC-BSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCB---T
T ss_pred             eEEEEECCCCeEEECC-CCCCcc-ceeEEEEECCEEEEEeCcccCCCCccccchhhhcccccccccccccccceec---c
Confidence            5889999887644321 111111 111122225566666552         2367788887766544333322211   1


Q ss_pred             eEEEEEccCCcEEEeec-C-----CeEEEEEecCCceeeEec--CCCceeEEEeecCceEEEeCCC-----CcEEEEEcC
Q psy7482         148 LDSVVWSPEGLLYAIPI-Q-----NKAVVFSVEKAGVLQTLK--SESKVHSVCFLNETTVCTGNEE-----SAITAYNLT  214 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~-~-----~~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d-----~~i~i~d~~  214 (327)
                      ..+..  .++++++.+. +     .....+|..+......-.  ....-.++....+..++.|+.+     ..+..||..
T Consensus        95 ~~~~~--~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~GG~~~~~~~~~~~~~d~~  172 (288)
T d1zgka1          95 IGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPE  172 (288)
T ss_dssp             CEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETT
T ss_pred             eeccc--cceeeEEecceecccccceeeeeccccCccccccccccccccceeeeeeecceEecCcccccccceEEEeecc
Confidence            12222  2566666553 2     234556665554322221  1111223334445555555543     457888877


Q ss_pred             CCceeEEee-ecccceEEEEEEecCCCcEEEEecCC-----CeEEEEEcCCCceeEEeecccC--ceEEEeeeCcEEEEE
Q psy7482         215 DGSHLWQIK-ASASRIKGLVFFSIPQETTVCTGNEE-----SAITAYNLTDGSHLWHIKASAS--RIKGLASHRNHLICI  286 (327)
Q Consensus       215 ~~~~~~~~~-~~~~~v~~~~~~~s~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~l~~~  286 (327)
                      +.+....-. .....-.+...   .++..++.|+.+     .....+|..+.+....-.....  ....+.+..++++.|
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~---~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~l~v~G  249 (288)
T d1zgka1         173 RNEWRMITAMNTIRSGAGVCV---LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLG  249 (288)
T ss_dssp             TTEEEECCCCSSCCBSCEEEE---ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred             ccccccccccccccccccccc---eeeeEEEecCccccccccceeeeeecceeeecccCccCcccceEEEEECCEEEEEe
Confidence            654322111 11111122333   356666666544     3467777766553221111111  112222333777777


Q ss_pred             ecCCc-----EEEEEccCccCCCceeeeecCC
Q psy7482         287 TSAGD-----LVVWELNEDVTREPQRVSATND  313 (327)
Q Consensus       287 ~~dg~-----v~iw~~~~~~~~~~~~~~~~~~  313 (327)
                      +.++.     +.+||+...   .+..+.....
T Consensus       250 G~~~~~~~~~v~~yd~~~~---~W~~~~~~p~  278 (288)
T d1zgka1         250 GYDGHTFLDSVECYDPDTD---TWSEVTRMTS  278 (288)
T ss_dssp             CBCSSCBCCEEEEEETTTT---EEEEEEECSS
T ss_pred             cCCCCeecceEEEEECCCC---EEEECCCCCC
Confidence            76543     788998887   5666654443

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=95.10  E-value=0.32  Score=34.10  Aligned_cols=206  Identities=13%  Similarity=0.166  Sum_probs=109.4

Q ss_pred             CCeEEEEEccccccccccc--------------ccc-ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEeccc
Q psy7482          33 DETVVLYDMVKRKQSGALM--------------QHE-GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHK   97 (327)
Q Consensus        33 dg~v~~w~~~~~~~~~~~~--------------~~~-~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~   97 (327)
                      |-.+.+-|+..|+..+.+.              ... -.|.+++.. +.+..++|+......+|-++.|+..+.......
T Consensus        67 dfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~spk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpF  145 (313)
T d2hu7a1          67 GRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAVKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGF  145 (313)
T ss_dssp             SEEEEEEECSTTSCCEEEEEEETTSTTCEEECTTSCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSC
T ss_pred             ceEEEEeehhcCcceeeEEEEccCCCCeeeEecCCceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCc
Confidence            4456666777776554332              111 345666654 445667888877899999988876554322222


Q ss_pred             CC-------ceeeEEEe-cCCCEEEEEeC-CCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec----
Q psy7482          98 GT-------AVNHISIH-PSGKLALSVGK-DKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI----  164 (327)
Q Consensus        98 ~~-------~v~~~~~~-~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----  164 (327)
                      +.       -|..+.+- ++..-++++.. .|.+++++...|.                ++.....+.++. +++.    
T Consensus       146 sFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG~lri~tpkeGS----------------~~~ay~~~gnKV-~sdyEt~g  208 (313)
T d2hu7a1         146 GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGS----------------FSSASISPGMKV-TAGLETAR  208 (313)
T ss_dssp             EEEEEEETTEEEEEEEEETTEEEEEEEETTTEEEEEECCSSEE----------------EEEEEECTTSCE-EEEEEESS
T ss_pred             ceEEeccCCeEEEEeeecCCcceEEEEecccCCEEEecCCCCc----------------ccceeEccCcee-eeccCCCC
Confidence            22       13333332 22223444444 5566666554432                555666666655 3332    


Q ss_pred             CCeEEEEEecCCceeeE-ec-------CCCceeEEEeecCc-eEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEE
Q psy7482         165 QNKAVVFSVEKAGVLQT-LK-------SESKVHSVCFLNET-TVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFF  235 (327)
Q Consensus       165 ~~~i~i~d~~~~~~~~~-~~-------~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~  235 (327)
                      +....-+|.++++.... +.       ..-.|.-+-+.|++ +++.+-.||.-++|.  +++.+...++   .+......
T Consensus       209 Esywit~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~--nGk~in~p~G---~~~gat~i  283 (313)
T d2hu7a1         209 EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI--DGERVEAPQG---NHGRVVLW  283 (313)
T ss_dssp             CEEEEEECTTTCCEEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE--TTEEECCCSS---EEEEEEEE
T ss_pred             ceEEEEEecccCceeeeecCcccceeecceEEEeeeeCCCCcEEEEEecCCchheee--cceEecCCCC---cccceEEE
Confidence            22333557776653321 11       23345556688985 668899999999997  5766655433   23333321


Q ss_pred             ecCCCcEEEEecCCCeEEEEEcCCCcee
Q psy7482         236 SIPQETTVCTGNEESAITAYNLTDGSHL  263 (327)
Q Consensus       236 ~s~~~~~l~~~~~d~~i~i~d~~~~~~~  263 (327)
                        .+.-++.-.+-..--+|-.+.+++++
T Consensus       284 --~~~iyfshsSL~tP~kI~~~~~~~~~  309 (313)
T d2hu7a1         284 --RGKLVTSHTSLSTPPRIVSLPSGEPL  309 (313)
T ss_dssp             --TTEEEEEEEETTEEEEEEEETTCCEE
T ss_pred             --CCEEEEeecccCCCceeEEcCCCCcc
Confidence              22223333333334455555555543

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.75  E-value=0.74  Score=36.49  Aligned_cols=231  Identities=11%  Similarity=0.107  Sum_probs=115.3

Q ss_pred             CCCEEEEe-c----CCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCC----------------CcEEEE
Q psy7482          23 TSKLAASS-G----ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD----------------GSIAIF   81 (327)
Q Consensus        23 ~~~~l~~~-~----~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------~~i~iw   81 (327)
                      +++++|-+ +    ....+++.|+.+++.+...-. ......++|.+|++.|+-...+                ..|..+
T Consensus       135 d~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~-~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~~~v~~h  213 (430)
T d1qfma1         135 DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYH  213 (430)
T ss_dssp             TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEE
T ss_pred             CCCEEEEEeccccCchheeEEeccCcceecccccc-cccccceEEcCCCCEEEEEEeccccCcccccccccCCcceEEEE
Confidence            88888733 2    234699999999986542211 1122568899999987644322                257778


Q ss_pred             EcCCCeEE--EeEEecccC-CceeeEEEecCCCEEEEEeC---CCCEEEE--EcCCCceee------eeeccccCccccc
Q psy7482          82 RVGSWQLE--KLFKKAHKG-TAVNHISIHPSGKLALSVGK---DKTLRTW--NLVKGRSAY------ITNLSSYGVGFEN  147 (327)
Q Consensus        82 ~~~~~~~~--~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~iw--d~~~~~~~~------~~~~~~~~~~~~~  147 (327)
                      .+.+....  ..+ ..... .-+..+..++++++++....   ++...+|  |+.......      ........   . 
T Consensus       214 ~lgt~~~~d~~v~-~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---~-  288 (430)
T d1qfma1         214 VLGTDQSEDILCA-EFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE---G-  288 (430)
T ss_dssp             ETTSCGGGCEEEE-CCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS---S-
T ss_pred             ECCCCcccccccc-ccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeecccc---c-
Confidence            87765432  223 22221 11556677889988765432   3333444  543321110      00011110   0 


Q ss_pred             eEEEEEccCCcEEEeec----CCeEEEEEecCCce---eeEec-CCCceeEEEeec-CceEEEe-CCC--CcEEEEEcCC
Q psy7482         148 LDSVVWSPEGLLYAIPI----QNKAVVFSVEKAGV---LQTLK-SESKVHSVCFLN-ETTVCTG-NEE--SAITAYNLTD  215 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~----~~~i~i~d~~~~~~---~~~~~-~~~~i~~~~~~~-~~~l~~~-~~d--~~i~i~d~~~  215 (327)
                      .....-+.++.+++...    ++.|...++.....   ...+. +...+..-.+.. +++|+.. ..+  ..|+++++..
T Consensus       289 ~~~~~~~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~~~~~~~l~v~~~~~  368 (430)
T d1qfma1         289 EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT  368 (430)
T ss_dssp             CEEEEEEETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT
T ss_pred             ceEEEecCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEEcCCEeEEEEEECCC
Confidence            11222222334444432    46677777665432   12233 333343333332 3455544 344  3578899888


Q ss_pred             CceeEEeeecccceEEEEEEecCCCcEEE-E-ec--CCCeEEEEEcCCCc
Q psy7482         216 GSHLWQIKASASRIKGLVFFSIPQETTVC-T-GN--EESAITAYNLTDGS  261 (327)
Q Consensus       216 ~~~~~~~~~~~~~v~~~~~~~s~~~~~l~-~-~~--~d~~i~i~d~~~~~  261 (327)
                      ++.........+.+..+..  .++...+. . .+  .-.++.-+|+.+++
T Consensus       369 ~~~~~~~~~~~~sv~~~~~--~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         369 GALLKIFPLEVGSVVGYSG--QKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             CCEEEEECCCSSEEEEEEC--CTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             CcEEEecCCCCceEeeccC--CCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            7665444433444444332  23333332 2 22  23678888888775

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=93.76  E-value=0.7  Score=32.39  Aligned_cols=225  Identities=15%  Similarity=0.142  Sum_probs=115.5

Q ss_pred             CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCC--CeEEE------ecCCCcEEEEEcCCCeEEEeEEe
Q psy7482          23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG--SHLIS------CSDDGSIAIFRVGSWQLEKLFKK   94 (327)
Q Consensus        23 ~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~------~~~d~~i~iw~~~~~~~~~~~~~   94 (327)
                      +.++++++...|.+.++-+..++.+.-.+   .+|.... .|..  .++..      |-.-..|.+-++...-....+ .
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~vkLtk---ePI~~~~-~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i-~   99 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETVKLNR---EPINSVL-DPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRL-E   99 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCEECCS---SCCSEEC-EECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEEC-T
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEEEEec---ccccCcC-CCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEe-c
Confidence            45588888889999999887776554322   2232211 1111  11111      111223444444422222222 1


Q ss_pred             cccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeec---CCe--EE
Q psy7482          95 AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPI---QNK--AV  169 (327)
Q Consensus        95 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~--i~  169 (327)
                      ......|.+++.. +.+..++|+......+|-++.|+.......+...    .|+.+.    +.+++..+   .+.  ..
T Consensus       100 spk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFs----FVtDI~----~d~I~G~g~~~g~~~sfF  170 (313)
T d2hu7a1         100 AVKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFG----FVSDIR----GDLIAGLGFFGGGRVSLF  170 (313)
T ss_dssp             TSCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCE----EEEEEE----TTEEEEEEEEETTEEEEE
T ss_pred             CCceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcc----eEEecc----CCeEEEEeeecCCcceEE
Confidence            1221225555553 4567788888888999999999887776666552    133332    33332221   111  22


Q ss_pred             EEEecCCceeeEec-CCCceeEEEeecCceEEEe----CCCCcEEEEEcCCCceeEE-eee------cccceEEEEEEec
Q psy7482         170 VFSVEKAGVLQTLK-SESKVHSVCFLNETTVCTG----NEESAITAYNLTDGSHLWQ-IKA------SASRIKGLVFFSI  237 (327)
Q Consensus       170 i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~----~~d~~i~i~d~~~~~~~~~-~~~------~~~~v~~~~~~~s  237 (327)
                      +=|+.+|. ++.+. ..+.++.....+++.++++    ++..-| -+|+++++.-.. +..      ....|+-+-+  .
T Consensus       171 ~adl~SG~-lri~tpkeGS~~~ay~~~gnKV~sdyEt~gEsywi-t~D~~s~~yerve~P~kd~~sy~p~~I~~~~Y--~  246 (313)
T d2hu7a1         171 TSNLSSGG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLV-TVDPRDGSVEDLELPSKDFSSYRPTAITWLGY--L  246 (313)
T ss_dssp             EEETTTEE-EEEECCSSEEEEEEEECTTSCEEEEEEESSCEEEE-EECTTTCCEEECCCSSCHHHHHCCSEEEEEEE--C
T ss_pred             EEecccCC-EEEecCCCCcccceeEccCceeeeccCCCCceEEE-EEecccCceeeeecCcccceeecceEEEeeee--C
Confidence            22332222 22222 3445566666666444433    222234 457776543221 111      1123444556  4


Q ss_pred             CCCcEEEEecCCCeEEEEEcCCCceeEEee
Q psy7482         238 PQETTVCTGNEESAITAYNLTDGSHLWHIK  267 (327)
Q Consensus       238 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~  267 (327)
                      |++++++.+-.||.-++|.  +|+.+..-+
T Consensus       247 Pdd~L~iiakrdG~s~lF~--nGk~in~p~  274 (313)
T d2hu7a1         247 PDGRLAVVARREGRSAVFI--DGERVEAPQ  274 (313)
T ss_dssp             TTSCEEEEEEETTEEEEEE--TTEEECCCS
T ss_pred             CCCcEEEEEecCCchheee--cceEecCCC
Confidence            9999999999999999997  566554433

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=92.70  E-value=1.3  Score=32.43  Aligned_cols=220  Identities=9%  Similarity=0.018  Sum_probs=107.8

Q ss_pred             CccEEEEEe-CCCEEEEecCCCeEEEEEccccccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeE
Q psy7482          14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF   92 (327)
Q Consensus        14 ~~~v~~~~~-~~~~l~~~~~dg~v~~w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~   92 (327)
                      ...|..++- ....++ -. ||.|..|-....-.+..-......|..++-- +...++  -.|+.+..|.....-.....
T Consensus        25 ~~~i~~va~G~~h~~a-l~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G-~~~~~a--l~dg~v~~wG~~~~gq~~~~   99 (273)
T d1jtdb_          25 QSGVDAIAGGYFHGLA-LK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAG-NYHSLA--LKDGEVIAWGGNEDGQTTVP   99 (273)
T ss_dssp             SSSEEEEEECSSEEEE-EE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEEC-SSEEEE--EETTEEEEEECCTTSTTCCC
T ss_pred             CCCcEEEEccCCEEEE-EE-CCEEEEEeCCCCCceeeeecccccceEEecC-CCceee--eeeeeeeccCCCcceeeccc
Confidence            456888888 444444 34 8999999765443332222223345555432 222233  24889999976432111111


Q ss_pred             EecccCCceeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEE
Q psy7482          93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFS  172 (327)
Q Consensus        93 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d  172 (327)
                       ...... +..++....  ..+. -.|+.+..|.-......... ...    ...+..++-  ....++...++.++.|-
T Consensus       100 -~~~~~~-~~~i~~~~~--~~~~-~~dg~v~~~g~~~~~~~~~~-~~~----~~~v~~~~~--~~~~~~~~~~g~~~~~G  167 (273)
T d1jtdb_         100 -AEARSG-VDAIAAGAW--ASYA-LKDGKVIAWGDDSDGQTTVP-AEA----QSGVTALDG--GVYTALAVKNGGVIAWG  167 (273)
T ss_dssp             -GGGGSS-CCEEEEETT--EEEE-EETTEEEEEECCTTSTTSCC-GGG----GSSEEEEEE--CSSEEEEEETTEEEEEE
T ss_pred             -cccccc-eeEEeeecc--cccc-cccccceecccCCCCceeee-ccC----CceEEEEec--cceeeeeecccceeEee
Confidence             111222 444444322  2222 35788999874432221111 111    112444432  22334444578888886


Q ss_pred             ecCCce-eeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCe
Q psy7482         173 VEKAGV-LQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESA  251 (327)
Q Consensus       173 ~~~~~~-~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~  251 (327)
                      ...... .........|..++......++.  .||.|+.|=......+..-......|..|+.   -....++.  .||.
T Consensus       168 ~~~~g~~~~~~~~~~~v~~Is~G~~h~~~l--~dG~v~~WG~n~~Gql~~~~~~~~~v~~I~~---G~~~~~~l--~~g~  240 (273)
T d1jtdb_         168 DNYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIAS---GEWYSLAL--KNGK  240 (273)
T ss_dssp             CCTTSTTSCCGGGSSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEE---CSSCEEEE--ETTE
T ss_pred             cccCCcccccccccCCccceeccceeeEEE--ecCcEEEcCCCCCCccCCCccCCCCcEEEEe---CcceEEEE--ECCE
Confidence            543322 22223456777777655433333  2789999954332222111122234666664   34444444  3799


Q ss_pred             EEEEEc
Q psy7482         252 ITAYNL  257 (327)
Q Consensus       252 i~i~d~  257 (327)
                      |..|-.
T Consensus       241 v~~WG~  246 (273)
T d1jtdb_         241 VIAWGS  246 (273)
T ss_dssp             EEEEST
T ss_pred             EEEECC
Confidence            999953

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.28  E-value=1.9  Score=33.35  Aligned_cols=108  Identities=19%  Similarity=0.177  Sum_probs=68.4

Q ss_pred             eEEEEEccCCcEEEeecCCeEEEEEecCC-----------ceeeEecCCCceeEEEeecCceEEEeCCCCcEEEEEcCCC
Q psy7482         148 LDSVVWSPEGLLYAIPIQNKAVVFSVEKA-----------GVLQTLKSESKVHSVCFLNETTVCTGNEESAITAYNLTDG  216 (327)
Q Consensus       148 v~~~~~~~~~~~l~~~~~~~i~i~d~~~~-----------~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~  216 (327)
                      ..-++.++...++++|+...+.+..+..-           ...... .-..|..++|+.+. +++. .++.+..++....
T Consensus        39 ~~LLAVsn~~GLl~aa~~~~l~V~~t~~l~~~~~~~~~~~~~~~~~-~ip~v~~vafs~d~-l~v~-~~~~l~~~~~~~l  115 (381)
T d1xipa_          39 LQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEK-EIPDVIFVCFHGDQ-VLVS-TRNALYSLDLEEL  115 (381)
T ss_dssp             CBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTTEEEEEEETTE-EEEE-ESSEEEEEESSST
T ss_pred             cceEEEeCCCCEEEEECCCEEEEEEHHHHHHHhhccCCCCcceecc-CCCCeEEEEeeCCE-EEEE-eCCCEEEEEeecc
Confidence            66788888777888877667777764321           111111 22368889997664 3333 4456788887665


Q ss_pred             ceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCce
Q psy7482         217 SHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSH  262 (327)
Q Consensus       217 ~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~  262 (327)
                      ........-..++.++.+.  |  ..++....++.+.++++.+++.
T Consensus       116 ~~~~~~~~~~~~~~~~~~~--p--~~~~l~~~~~~~~~~~l~~~~~  157 (381)
T d1xipa_         116 SEFRTVTSFEKPVFQLKNV--N--NTLVILNSVNDLSALDLRTKST  157 (381)
T ss_dssp             TCEEEEEECSSCEEEEEEC--S--SEEEEEETTSEEEEEETTTCCE
T ss_pred             ccccccccccccccceecC--C--ceeEEEecCCCEEEEEeccCcc
Confidence            5444444445567777763  3  3455566688999999988864

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=90.22  E-value=3.5  Score=32.67  Aligned_cols=55  Identities=16%  Similarity=0.260  Sum_probs=38.2

Q ss_pred             ccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEe------cccCCceeeEEEecC
Q psy7482          55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK------AHKGTAVNHISIHPS  109 (327)
Q Consensus        55 ~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~------~~~~~~v~~~~~~~~  109 (327)
                      ...++|+|.|++++|++--..|.|++++..+++.......      .........++++|+
T Consensus        27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            4567999999999888776689999998877655433211      111122788999984

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=88.28  E-value=3.5  Score=29.97  Aligned_cols=244  Identities=10%  Similarity=0.059  Sum_probs=113.3

Q ss_pred             CeEEEEEccc-cccccccccccccEEEEEECCCCCeEEEecCCCcEEEEEcCCCeEEEeEEecccCCceeeEEEecCCCE
Q psy7482          34 ETVVLYDMVK-RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKL  112 (327)
Q Consensus        34 g~v~~w~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  112 (327)
                      .+|+.|--.. +............|..++--  ....+.-. ||.|..|-....-.+..- ...... +..++.-  ...
T Consensus         4 ~sv~~WG~~~~~~~~~~~~~~~~~i~~va~G--~~h~~al~-dG~v~~wG~N~~GQlG~~-~~~~~~-v~~v~~G--~~~   76 (273)
T d1jtdb_           4 TSVVAWGGNNDWGEATVPAEAQSGVDAIAGG--YFHGLALK-GGKVLGWGANLNGQLTMP-AATQSG-VDAIAAG--NYH   76 (273)
T ss_dssp             SEEEEESSCCSSSTTCCCGGGSSSEEEEEEC--SSEEEEEE-TTEEEEEECCTTSTTSCC-GGGGSC-CCEEEEC--SSE
T ss_pred             CEEEEECCCCCCCceeccccCCCCcEEEEcc--CCEEEEEE-CCEEEEEeCCCCCceeee-eccccc-ceEEecC--CCc
Confidence            3577775321 11111112234457777663  22333334 899999976543222211 122222 5555432  222


Q ss_pred             EEEEeCCCCEEEEEcCCCceeeeeeccccCccccceEEEEEccCCcEEEeecCCeEEEEEecCCceeeEe-cCCCceeEE
Q psy7482         113 ALSVGKDKTLRTWNLVKGRSAYITNLSSYGVGFENLDSVVWSPEGLLYAIPIQNKAVVFSVEKAGVLQTL-KSESKVHSV  191 (327)
Q Consensus       113 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~i~i~d~~~~~~~~~~-~~~~~i~~~  191 (327)
                      .+. -.||.+..|.....-..... ...    ...+..++....  ..+.-.|+.+..|........... .....+..+
T Consensus        77 ~~a-l~dg~v~~wG~~~~gq~~~~-~~~----~~~~~~i~~~~~--~~~~~~dg~v~~~g~~~~~~~~~~~~~~~~v~~~  148 (273)
T d1jtdb_          77 SLA-LKDGEVIAWGGNEDGQTTVP-AEA----RSGVDAIAAGAW--ASYALKDGKVIAWGDDSDGQTTVPAEAQSGVTAL  148 (273)
T ss_dssp             EEE-EETTEEEEEECCTTSTTCCC-GGG----GSSCCEEEEETT--EEEEEETTEEEEEECCTTSTTSCCGGGGSSEEEE
T ss_pred             eee-eeeeeeeccCCCcceeeccc-ccc----ccceeEEeeecc--cccccccccceecccCCCCceeeeccCCceEEEE
Confidence            222 24899999975432211110 000    111444443322  222234788888864432221111 123344444


Q ss_pred             EeecCceEEEeCCCCcEEEEEcCCCceeEEeeecccceEEEEEEecCCCcEEEEecCCCeEEEEEcCCCceeEEeecccC
Q psy7482         192 CFLNETTVCTGNEESAITAYNLTDGSHLWQIKASASRIKGLVFFSIPQETTVCTGNEESAITAYNLTDGSHLWHIKASAS  271 (327)
Q Consensus       192 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~s~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~  271 (327)
                      +-.. .. .....++.++.|-................|..++.   .....++. . ||.|+-|=....-.+..-.....
T Consensus       149 ~~~~-~~-~~~~~~g~~~~~G~~~~g~~~~~~~~~~~v~~Is~---G~~h~~~l-~-dG~v~~WG~n~~Gql~~~~~~~~  221 (273)
T d1jtdb_         149 DGGV-YT-ALAVKNGGVIAWGDNYFGQTTVPAEAQSGVDDVAG---GIFHSLAL-K-DGKVIAWGDNRYKQTTVPTEALS  221 (273)
T ss_dssp             EECS-SE-EEEEETTEEEEEECCTTSTTSCCGGGSSSEEEEEE---CSSEEEEE-E-TTEEEEEECCTTSTTCCCGGGGS
T ss_pred             eccc-ee-eeeecccceeEeecccCCcccccccccCCccceec---cceeeEEE-e-cCcEEEcCCCCCCccCCCccCCC
Confidence            4322 22 22334678888865443332222223456777765   33444443 3 79999996433221111111223


Q ss_pred             ceEEEeeeCcEEEEEecCCcEEEEEccCc
Q psy7482         272 RIKGLASHRNHLICITSAGDLVVWELNED  300 (327)
Q Consensus       272 ~v~~~~~~~~~l~~~~~dg~v~iw~~~~~  300 (327)
                      .|..|+-...+.+.- .||.|..|--...
T Consensus       222 ~v~~I~~G~~~~~~l-~~g~v~~WG~~~~  249 (273)
T d1jtdb_         222 GVSAIASGEWYSLAL-KNGKVIAWGSSRT  249 (273)
T ss_dssp             SCCEEEECSSCEEEE-ETTEEEEESTTCC
T ss_pred             CcEEEEeCcceEEEE-ECCEEEEECCCCC
Confidence            566776655333333 4899999965443

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=83.52  E-value=8.8  Score=30.24  Aligned_cols=56  Identities=13%  Similarity=0.166  Sum_probs=40.2

Q ss_pred             eeeEEEecCCCEEEEEeCCCCEEEEEcCCCceeeeeecccc---CccccceEEEEEccC
Q psy7482         101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLSSY---GVGFENLDSVVWSPE  156 (327)
Q Consensus       101 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~  156 (327)
                      .++|+|.|+++++++--..|.|++++..+++..........   .........++++|+
T Consensus        29 P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             ceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            78999999998877654479999999887766554443321   222345789999995