Psyllid ID: psy7515

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100------
Protein Sequence
MHYLDSKQWDNYLKARPGASKSPEGTGLDNEPTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGEGS
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEcccHHHHHHHHHHccccEEEEEccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHcccccccccccccccccccccEEEEEEEEEccccHHHHHHHHHHHccccccEEEEEEccccEEEEEccccHHHHHHHHHHcccEEEEEcccc
Coil and Loop (DISEMBL)
mhyldskqwdnylkarpgaskspegtgldneptmAKVHVFKAEMTCDGCSSAITRILDRMKdkgvesvecslpdqtvkvkstlDPDVLLEAIKKSgktcsyigegs
Flexible Loop (DISEMBL)
mhyldskqwdnylkarpgaskspegtgldnePTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESvecslpdqtvkvkstldpdVLLEaikksgktcsyigegs
Low Complexity Region (SEG)
MHYLDSKQWDNYLKARPGASKSPEGTGLDNEPTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGEGS
Disordered region (IsUnstruct)
***********************************KVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSL***TVKVKSTLDPDVLLEAIK*************
Disordered Region (DISOPRED)
*************************************HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGE**
Disordered Region (DISEMBL)
MHYLDSKQWDNYLKARP**********LDNEPTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGEGS
Disordered Region (DISPRO)
**YLDSKQWDNYLKARP***************TMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIG***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MHYLDSKQWDNYLKARPGASKSPEGTGLDNEPTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGEGS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	106	2.2.26 [Sep-21-2011]
Q9TT99	68	Copper transport protein	yes	N/A	0.594	0.926	0.424	1e-08
Q9XT28	68	Copper transport protein	N/A	N/A	0.594	0.926	0.409	3e-08
Q3T0E0	68	Copper transport protein	yes	N/A	0.594	0.926	0.409	3e-08
O00244	68	Copper transport protein	yes	N/A	0.594	0.926	0.393	2e-07
Q9WUC4	68	Copper transport protein	yes	N/A	0.594	0.926	0.393	3e-07
O08997	68	Copper transport protein	yes	N/A	0.594	0.926	0.393	5e-07
P38636	73	Metal homeostasis factor	yes	N/A	0.594	0.863	0.409	6e-06
Q54PZ2	67	Copper transport protein	yes	N/A	0.603	0.955	0.373	0.0001
Q6PWT7	274	Copper chaperone for supe	no	N/A	0.613	0.237	0.343	0.0007

>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 3/66 (4%)

Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
           H F  +MTC+GCS+A++R+L+++   GVE  +  LP++ V + S    D+LLE ++K+GK
Sbjct: 4   HEFSVDMTCEGCSNAVSRVLNKL--GGVE-FDIDLPNKKVCINSEHSVDILLETLEKTGK 60

Query: 98  TCSYIG 103
             SY+G
Sbjct: 61  AVSYLG 66

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.
Canis familiaris (taxid: 9615)

>sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 3/66 (4%)

Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
           H F  +MTC+GCS+A+TR+L+++   G    +  LP++ V + S    D LLE + K+GK
Sbjct: 4   HEFSVDMTCEGCSNAVTRVLNKL---GGVQFDIDLPNKKVCINSEHSVDTLLETLGKTGK 60

Query: 98  TCSYIG 103
             SY+G
Sbjct: 61  AVSYLG 66

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Ovis aries (taxid: 9940)

>sp|Q3T0E0|ATOX1_BOVIN Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 3/66 (4%)

Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
           H F  +MTC+GCS+A+TR+L+++   G    +  LP++ V + S    D LLE + K+GK
Sbjct: 4   HEFSVDMTCEGCSNAVTRVLNKL---GGVQFDIDLPNKKVCINSEHSVDTLLETLGKTGK 60

Query: 98  TCSYIG 103
             SY+G
Sbjct: 61  AVSYLG 66

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Bos taurus (taxid: 9913)

>sp|O00244|ATOX1_HUMAN Copper transport protein ATOX1 OS=Homo sapiens GN=ATOX1 PE=1 SV=1

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%)

Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
           H F  +MTC GC+ A++R+L+++   G    +  LP++ V ++S    D LL  +KK+GK
Sbjct: 4   HEFSVDMTCGGCAEAVSRVLNKL---GGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGK 60

Query: 98  TCSYIG 103
           T SY+G
Sbjct: 61  TVSYLG 66

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Homo sapiens (taxid: 9606)

>sp|Q9WUC4|ATOX1_RAT Copper transport protein ATOX1 OS=Rattus norvegicus GN=Atox1 PE=1 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%)

Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
           H F  +MTC GC+ A++R+L+++   GVE     LP++ V ++S    D+LL  + K+GK
Sbjct: 4   HEFSVDMTCGGCAEAVSRVLNKL--GGVE-FNIDLPNKKVCIESEHSSDILLATLNKTGK 60

Query: 98  TCSYIG 103
             SY+G
Sbjct: 61  AVSYLG 66

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Rattus norvegicus (taxid: 10116)

>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
           H F  +MTC+GC+ A++R+L+++   GVE     LP++ V + S    D LL  + K+GK
Sbjct: 4   HEFSVDMTCEGCAEAVSRVLNKL--GGVE-FNIDLPNKKVCIDSEHSSDTLLATLNKTGK 60

Query: 98  TCSYIG 103
             SY+G
Sbjct: 61  AVSYLG 66

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Mus musculus (taxid: 10090)

>sp|P38636|ATX1_YEAST Metal homeostasis factor ATX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATX1 PE=1 SV=1

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 34 MAKV--HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEA 91
          MA++  + F   MTC GCS A+ ++L ++ +  V  ++ SL  Q V V +TL  D +LE 
Sbjct: 1  MAEIKHYQFNVVMTCSGCSGAVNKVLTKL-EPDVSKIDISLEKQLVDVYTTLPYDFILEK 59

Query: 92 IKKSGK 97
          IKK+GK
Sbjct: 60 IKKTGK 65

Shuttles copper to the transport ATPase CCC2. Protects against oxygen toxicity.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium discoideum GN=atox1 PE=3 SV=2

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%)

Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST-LDPDVLLEAIKKSG 96
           + F  +MTC GCS A+  IL ++   GV +++  L ++ V  +S+ +  D LL+ I+K+G
Sbjct: 3   YSFFVDMTCGGCSKAVNAILSKI--DGVSNIQIDLENKKVSCESSKMGADELLKNIQKTG 60

Query: 97  KTCSYIG 103
           K CS I 
Sbjct: 61  KKCSIIA 67

Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.

Dictyostelium discoideum (taxid: 44689)

>sp|Q6PWT7|CCS_PIG Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS PE=2 SV=1

 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)

Query: 40  FKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTC 99
           F  +MTC  C  A++R L  +   G++SVE  L +Q V V++TL   V+   ++ +G+  
Sbjct: 16  FAVQMTCQSCVDAVSRSLQGVA--GIQSVEVQLENQMVLVQTTLPSQVVQALLEDTGRQA 73

Query: 100 SYIGEGS 106
              G GS
Sbjct: 74  VLKGMGS 80

Delivers copper to copper zinc superoxide dismutase (SOD1).

Sus scrofa (taxid: 9823)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
112982713	72	copper chaperone [Bombyx mori] gi|110645	0.660	0.972	0.557	4e-16
442749427	74	Putative copper chaperone atox1 aedes ae	0.650	0.932	0.521	3e-14
346466013	94	hypothetical protein [Amblyomma maculatu	0.650	0.734	0.507	1e-13
346466011	97	hypothetical protein [Amblyomma maculatu	0.650	0.711	0.492	2e-13
56117736	73	antioxidant enzyme [Gryllotalpa oriental	0.641	0.931	0.608	3e-13
51011496	74	copper transport protein [Ixodes pacific	0.650	0.932	0.492	5e-13
427785887	74	Putative copper chaperone atox1 copper c	0.650	0.932	0.492	2e-12
195592220	71	GD14984 [Drosophila simulans] gi|1941978	0.622	0.929	0.522	5e-12
357614747	62	copper chaperone [Danaus plexippus]	0.566	0.967	0.55	7e-12
391348142	73	PREDICTED: copper transport protein ATOX	0.669	0.972	0.478	8e-12

>gi|112982713|ref|NP_001037685.1| copper chaperone [Bombyx mori] gi|110645049|gb|ABG81361.1| copper chaperone [Bombyx mori]

 Score = 89.0 bits (219), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 51/70 (72%)

Query: 34  MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIK 93
           M   H+F  EMTC+GCS A+ R+L+R+K +GVE +  SLP+Q V VKSTL  D LLE IK
Sbjct: 1   MTTTHIFNVEMTCEGCSGAVERVLNRLKGQGVEDISISLPEQKVSVKSTLSADDLLEIIK 60

Query: 94  KSGKTCSYIG 103
           K+GK  +Y+G
Sbjct: 61  KTGKKTTYVG 70

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|442749427|gb|JAA66873.1| Putative copper chaperone atox1 aedes aegypti copper chaperone atox1 [Ixodes ricinus]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 36/69 (52%), Positives = 52/69 (75%)

Query: 35  AKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKK 94
           ++VH F+ EMTC+GCS A+ R+L +++ +GV  VE  LP++ V V STL  + LLE +KK
Sbjct: 3   SQVHEFEVEMTCEGCSGAVQRVLGKLEGQGVNKVEIDLPNKRVFVDSTLGSEKLLEVLKK 62

Query: 95  SGKTCSYIG 103
           +GKTCSY+G
Sbjct: 63  AGKTCSYVG 71

Source: Ixodes ricinus

Species: Ixodes ricinus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346466013|gb|AEO32851.1| hypothetical protein [Amblyomma maculatum]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 51/69 (73%)

Query: 35  AKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKK 94
           ++VH F+ EMTC+GCS A+ R+L +++ +GV  ++  L +Q V V ST+  D LLE +KK
Sbjct: 23  SQVHEFQVEMTCEGCSGAVKRVLGKLEGQGVNKIDIDLKEQRVYVDSTMTSDQLLEVLKK 82

Query: 95  SGKTCSYIG 103
           +GKTCSYIG
Sbjct: 83  AGKTCSYIG 91

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|346466011|gb|AEO32850.1| hypothetical protein [Amblyomma maculatum]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 51/69 (73%)

Query: 35  AKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKK 94
           ++VH F+ EMTC+GCS A+ R+L +++ +GV  ++  L +Q V V ST+  D +LE +KK
Sbjct: 26  SQVHEFQVEMTCEGCSGAVKRVLGKLEGQGVNKIDVHLKEQRVYVDSTMTSDQVLEVLKK 85

Query: 95  SGKTCSYIG 103
           +GKTCSYIG
Sbjct: 86  AGKTCSYIG 94

Source: Amblyomma maculatum

Species: Amblyomma maculatum

Genus: Amblyomma

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|56117736|gb|AAV73808.1| antioxidant enzyme [Gryllotalpa orientalis]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 1/69 (1%)

Query: 35  AKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKK 94
           +KVH FK EMTC GCSSA+ ++L ++KD GVE VE SL  Q V V S+L  D LLE IKK
Sbjct: 3   SKVHEFKVEMTCGGCSSAVEKVLGKVKD-GVEKVEISLDQQRVWVTSSLPSDELLEIIKK 61

Query: 95  SGKTCSYIG 103
           +GKT  YIG
Sbjct: 62  TGKTTEYIG 70

Source: Gryllotalpa orientalis

Species: Gryllotalpa orientalis

Genus: Gryllotalpa

Family: Gryllotalpidae

Order: Orthoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|51011496|gb|AAT92157.1| copper transport protein [Ixodes pacificus]

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 51/69 (73%)

Query: 35  AKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKK 94
           ++VH F+ EMTC+GCS A+ R+L +++ +GV  VE  LP++ V V STL  + LLE +KK
Sbjct: 3   SQVHEFEVEMTCEGCSGAVQRVLGKLEGQGVNKVEIDLPNKRVFVDSTLGSEKLLEVLKK 62

Query: 95  SGKTCSYIG 103
           +GK CS++G
Sbjct: 63  AGKACSHVG 71

Source: Ixodes pacificus

Species: Ixodes pacificus

Genus: Ixodes

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427785887|gb|JAA58395.1| Putative copper chaperone atox1 copper chaperone atox1 [Rhipicephalus pulchellus]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 50/69 (72%)

Query: 35  AKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKK 94
           ++VH FK EMTC+GCS A+ R+L +++ +GV  V+  L +Q V V S+L  + LL  +KK
Sbjct: 3   SQVHEFKVEMTCEGCSGAVQRVLGKLEGQGVNKVDVDLKEQRVYVDSSLTSEELLGVLKK 62

Query: 95  SGKTCSYIG 103
           +GKTCSY+G
Sbjct: 63  AGKTCSYVG 71

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195592220|ref|XP_002085834.1| GD14984 [Drosophila simulans] gi|194197843|gb|EDX11419.1| GD14984 [Drosophila simulans]

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 49/67 (73%), Gaps = 1/67 (1%)

Query: 37  VHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSG 96
           VH FK EMTC GC+SA+ R+L ++ DK VE V  +L D+TV VKS L  D L+E ++K+G
Sbjct: 3   VHEFKVEMTCGGCASAVERVLGKLGDK-VEKVNINLEDRTVSVKSNLSSDELMEQLRKTG 61

Query: 97  KTCSYIG 103
           K+ +Y+G
Sbjct: 62  KSTTYVG 68

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357614747|gb|EHJ69248.1| copper chaperone [Danaus plexippus]

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 45/60 (75%)

Query: 44  MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIG 103
           MTC+GCS A+ R+L+R+K +GV+ +  SLP+Q V V STL  D LLE IKK+GK  +Y+G
Sbjct: 1   MTCEGCSGAVERVLNRLKGQGVDDISISLPEQKVSVTSTLSADQLLEVIKKTGKKTAYVG 60

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|391348142|ref|XP_003748310.1| PREDICTED: copper transport protein ATOX1-like [Metaseiulus occidentalis]

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 49/71 (69%)

Query: 34  MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIK 93
           M+ VH F+ EMTC  C++A+ R+L +++ +GVE V+  L +  V V STL  D LLE IK
Sbjct: 1   MSSVHEFEVEMTCQSCANAVKRVLGKLEGQGVEKVDIDLANHKVFVTSTLSADDLLEVIK 60

Query: 94  KSGKTCSYIGE 104
           K+GK  SY+G+
Sbjct: 61  KTGKKSSYVGQ 71

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	106
FB|FBgn0052446	71	Atox1 [Drosophila melanogaster	0.622	0.929	0.507	7.9e-14
UNIPROTKB|F1P2A1	71	ATOX1 "Uncharacterized protein	0.622	0.929	0.463	1e-11
UNIPROTKB|F1PBC8	67	ATOX1 "Copper transport protei	0.594	0.940	0.424	2e-10
UNIPROTKB|Q9TT99	68	ATOX1 "Copper transport protei	0.594	0.926	0.424	2e-10
UNIPROTKB|Q3T0E0	68	ATOX1 "Copper transport protei	0.594	0.926	0.424	6.6e-10
UNIPROTKB|I3L7P7	68	ATOX1 "Uncharacterized protein	0.594	0.926	0.424	8.4e-10
TAIR|locus:2205288	106	ATX1 "homolog of anti-oxidant	0.660	0.660	0.383	1.4e-09
TAIR|locus:2078461	121	CCH "copper chaperone" [Arabid	0.622	0.545	0.382	1.4e-09
UNIPROTKB|E5RIM7	73	ATOX1 "Copper transport protei	0.594	0.863	0.409	2.2e-09
UNIPROTKB|O00244	68	ATOX1 "Copper transport protei	0.594	0.926	0.409	2.2e-09

FB|FBgn0052446 Atox1 [Drosophila melanogaster (taxid:7227)]

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 34/67 (50%), Positives = 48/67 (71%)

Query:    37 VHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSG 96
             VH FK EMTC GC+SA+ R+L ++ DK VE V  +L D+TV V S L  D L+E ++K+G
Sbjct:     3 VHEFKVEMTCGGCASAVERVLGKLGDK-VEKVNINLEDRTVSVTSNLSSDELMEQLRKTG 61

Query:    97 KTCSYIG 103
             K+ +Y+G
Sbjct:    62 KSTTYVG 68

GO:0046872 "metal ion binding" evidence=IEA

GO:0030001 "metal ion transport" evidence=IEA

GO:0055070 "copper ion homeostasis" evidence=IMP

UNIPROTKB|F1P2A1 ATOX1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 32/69 (46%), Positives = 49/69 (71%)

Query:    38 HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
             H F  +MTC+GCS+A+TR+L R+   GV+  +  LP++ V ++S  + D LLE +KK+GK
Sbjct:     4 HEFFVDMTCEGCSNAVTRVLHRLG--GVQ-FDIDLPNKKVYIESEHNVDTLLETLKKTGK 60

Query:    98 TCSYIGEGS 106
             + SY+GE S
Sbjct:    61 SASYLGEKS 69

GO:0006825 "copper ion transport" evidence=IEA

GO:0006878 "cellular copper ion homeostasis" evidence=IEA

GO:0016531 "copper chaperone activity" evidence=IEA

GO:0032767 "copper-dependent protein binding" evidence=IEA

UNIPROTKB|F1PBC8 ATOX1 "Copper transport protein ATOX1" [Canis lupus familiaris (taxid:9615)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 28/66 (42%), Positives = 46/66 (69%)

Query:    38 HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
             H F  +MTC+GCS+A++R+L+++   GVE  +  LP++ V + S    D+LLE ++K+GK
Sbjct:     3 HEFSVDMTCEGCSNAVSRVLNKLG--GVE-FDIDLPNKKVCINSEHSVDILLETLEKTGK 59

Query:    98 TCSYIG 103
               SY+G
Sbjct:    60 AVSYLG 65

GO:0032767 "copper-dependent protein binding" evidence=IEA

GO:0016531 "copper chaperone activity" evidence=IEA

GO:0006878 "cellular copper ion homeostasis" evidence=IEA

GO:0006825 "copper ion transport" evidence=IEA

UNIPROTKB|Q9TT99 ATOX1 "Copper transport protein ATOX1" [Canis lupus familiaris (taxid:9615)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 28/66 (42%), Positives = 46/66 (69%)

Query:    38 HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
             H F  +MTC+GCS+A++R+L+++   GVE  +  LP++ V + S    D+LLE ++K+GK
Sbjct:     4 HEFSVDMTCEGCSNAVSRVLNKLG--GVE-FDIDLPNKKVCINSEHSVDILLETLEKTGK 60

Query:    98 TCSYIG 103
               SY+G
Sbjct:    61 AVSYLG 66

GO:0032767 "copper-dependent protein binding" evidence=IEA

GO:0016531 "copper chaperone activity" evidence=IEA

GO:0006878 "cellular copper ion homeostasis" evidence=IEA

GO:0006825 "copper ion transport" evidence=IEA

UNIPROTKB|Q3T0E0 ATOX1 "Copper transport protein ATOX1" [Bos taurus (taxid:9913)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 28/66 (42%), Positives = 44/66 (66%)

Query:    38 HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
             H F  +MTC+GCS+A+TR+L+++   GV+  +  LP++ V + S    D LLE + K+GK
Sbjct:     4 HEFSVDMTCEGCSNAVTRVLNKLG--GVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGK 60

Query:    98 TCSYIG 103
               SY+G
Sbjct:    61 AVSYLG 66

GO:0032767 "copper-dependent protein binding" evidence=IEA

GO:0016531 "copper chaperone activity" evidence=IEA

GO:0006878 "cellular copper ion homeostasis" evidence=IEA

GO:0006825 "copper ion transport" evidence=IEA

UNIPROTKB|I3L7P7 ATOX1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 28/66 (42%), Positives = 44/66 (66%)

Query:    38 HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
             H F  +MTC+GCS+A+TR+L+++   GV+  +  LP++ V + S    D LLE + K+GK
Sbjct:     4 HEFSVDMTCEGCSNAVTRVLNKLG--GVQ-FDIDLPNKKVCIDSEHSVDTLLETLGKTGK 60

Query:    98 TCSYIG 103
               SY+G
Sbjct:    61 AVSYLG 66

GO:0032767 "copper-dependent protein binding" evidence=IEA

GO:0016531 "copper chaperone activity" evidence=IEA

GO:0006878 "cellular copper ion homeostasis" evidence=IEA

GO:0006825 "copper ion transport" evidence=IEA

TAIR|locus:2205288 ATX1 "homolog of anti-oxidant 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 28/73 (38%), Positives = 45/73 (61%)

Query:    34 MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIK 93
             M++  V +  MTC+GC  A+ R+L +M+  GVES +  + +Q V VK  + PD +L+ + 
Sbjct:    31 MSQTVVLRVAMTCEGCVGAVKRVLGKME--GVESFDVDIKEQKVTVKGNVQPDAVLQTVT 88

Query:    94 KSGK-TCSYIGEG 105
             K+GK T  +  EG
Sbjct:    89 KTGKKTAFWEAEG 101

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0000785 "chromatin" evidence=IDA

TAIR|locus:2078461 CCH "copper chaperone" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 26/68 (38%), Positives = 42/68 (61%)

Query:    34 MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIK 93
             MA+  V K  M+C GC  A+ R+L +M+  GVES +  + +Q V VK  ++P+ + + + 
Sbjct:     1 MAQTVVLKVGMSCQGCVGAVNRVLGKME--GVESFDIDIKEQKVTVKGNVEPEAVFQTVS 58

Query:    94 KSGKTCSY 101
             K+GK  SY
Sbjct:    59 KTGKKTSY 66

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009507 "chloroplast" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

GO:0000302 "response to reactive oxygen species" evidence=IGI

GO:0006827 "high-affinity iron ion transport" evidence=IGI

GO:0006878 "cellular copper ion homeostasis" evidence=IMP;TAS

GO:0007568 "aging" evidence=IEP

GO:0016531 "copper chaperone activity" evidence=ISS

UNIPROTKB|E5RIM7 ATOX1 "Copper transport protein ATOX1" [Homo sapiens (taxid:9606)]

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 27/66 (40%), Positives = 44/66 (66%)

Query:    38 HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
             H F  +MTC GC+ A++R+L+++   GV+  +  LP++ V ++S    D LL  +KK+GK
Sbjct:     9 HEFSVDMTCGGCAEAVSRVLNKLG--GVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGK 65

Query:    98 TCSYIG 103
             T SY+G
Sbjct:    66 TVSYLG 71

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|O00244 ATOX1 "Copper transport protein ATOX1" [Homo sapiens (taxid:9606)]

 Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
 Identities = 27/66 (40%), Positives = 44/66 (66%)

Query:    38 HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
             H F  +MTC GC+ A++R+L+++   GV+  +  LP++ V ++S    D LL  +KK+GK
Sbjct:     4 HEFSVDMTCGGCAEAVSRVLNKLG--GVK-YDIDLPNKKVCIESEHSMDTLLATLKKTGK 60

Query:    98 TCSYIG 103
             T SY+G
Sbjct:    61 TVSYLG 66

GO:0006878 "cellular copper ion homeostasis" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0005507 "copper ion binding" evidence=IDA

GO:0006825 "copper ion transport" evidence=TAS

GO:0016530 "metallochaperone activity" evidence=TAS

GO:0016531 "copper chaperone activity" evidence=IDA

GO:0005829 "cytosol" evidence=TAS

GO:0032767 "copper-dependent protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q54PZ2	ATOX1_DICDI	No assigned EC number	0.3731	0.6037	0.9552	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	106
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	8e-11
PLN02957	238	PLN02957, PLN02957, copper, zinc superoxide dismut	8e-09
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	3e-08
COG2608	71	COG2608, CopZ, Copper chaperone [Inorganic ion tra	1e-07
PRK13748	561	PRK13748, PRK13748, putative mercuric reductase; P	0.004

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 52.6 bits (127), Expect = 8e-11
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 44  MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCS 100
           MTC GC S I + L+++   GVESVE  L      V+    + P+ LLEAI+ +G    
Sbjct: 7   MTCAGCVSKIEKALEKL--PGVESVEVDLETGKATVEYDPEVSPEELLEAIEDAGYKAR 63

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215516 PLN02957, PLN02957, copper, zinc superoxide dismutase

 Score = 50.5 bits (121), Expect = 8e-09
 Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)

Query: 40  FKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTC 99
           F  +M C+GC +A+   L+ ++  GV++VE  L +Q V+V  +     +  A++++G+  
Sbjct: 10  FMVDMKCEGCVAAVKNKLETLE--GVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKA 67

Query: 100 SYIGEG 105
             IG+G
Sbjct: 68  RLIGQG 73

Length = 238

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 46.1 bits (110), Expect = 3e-08
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)

Query: 39 VFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDP---DVLLEAIKKS 95
          +    MTC GC+  + + L ++   GV SV   L    V V    DP   + L +AI+K+
Sbjct: 2  LRVPGMTCAGCAKKVEKALSKL--PGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKA 59

Query: 96 GKT 98
          G  
Sbjct: 60 GYE 62

Length = 62

>gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]

 Score = 45.1 bits (107), Expect = 1e-07
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 34 MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLE 90
          M K  +    MTC  C   + + L+ +   GV SV+  L   T  V    + +D + ++E
Sbjct: 1  MMKTTLKVEGMTCGHCVKTVEKALEEV--DGVASVDVDLEKGTATVTFDSNKVDIEAIIE 58

Query: 91 AIKKSG 96
          AI+ +G
Sbjct: 59 AIEDAG 64

Length = 71

>gnl|CDD|184298 PRK13748, PRK13748, putative mercuric reductase; Provisional

 Score = 34.7 bits (80), Expect = 0.004
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQT--VKVKSTLDPDVLLEAIKKSG 96
          MTCD C++ +   L+++   GV+S + S P  +  + ++    PD L  A+   G
Sbjct: 9  MTCDSCAAHVKDALEKV--PGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLG 61

Length = 561

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	106
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.49
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.46
KOG4656|consensus	247		99.19
KOG1603|consensus	73		99.07
PRK10671	834	copA copper exporting ATPase; Provisional	98.63
PLN02957	238	copper, zinc superoxide dismutase	98.58
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.28
TIGR00003	68	copper ion binding protein. This model describes a	98.0
KOG0207|consensus	951		97.71
KOG0207|consensus	951		97.67
PRK10671	834	copA copper exporting ATPase; Provisional	97.54
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.41
TIGR02052	92	MerP mercuric transport protein periplasmic compon	92.59
PF01206	70	TusA: Sulfurtransferase TusA; InterPro: IPR001455	92.12
PRK13748	561	putative mercuric reductase; Provisional	91.07
COG1888	97	Uncharacterized protein conserved in archaea [Func	87.15
PRK11018	78	hypothetical protein; Provisional	85.26
PF02680	95	DUF211: Uncharacterized ArCR, COG1888; InterPro: I	84.17
cd03421	67	SirA_like_N SirA_like_N, a protein of unknown func	82.28
cd03420	69	SirA_RHOD_Pry_redox SirA_RHOD_Pry_redox. SirA-like	80.72

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.49  E-value=2.3e-13  Score=77.18  Aligned_cols=58  Identities=36%  Similarity=0.680  Sum_probs=53.7

Q ss_pred             EEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEec---CCHHHHHHHHHhcCCc
Q psy7515          39 VFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST---LDPDVLLEAIKKSGKT   98 (106)
Q Consensus        39 ~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~---~~~~~i~~~i~~~G~~   98 (106)
                      +|.|+ |+|++|+.+|+++|.+++  ||.++.+|+.+++++|...   .++++|.++|+++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~--GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLP--GVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTST--TEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCC--CCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            58898 999999999999999999  9999999999999999844   5679999999999995

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.46  E-value=9.3e-13  Score=77.12  Aligned_cols=64  Identities=33%  Similarity=0.577  Sum_probs=57.3

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--e-cCCHHHHHHHHHhcCCceEee
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--S-TLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~-~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      ...|.++ |+|.+|+.+|+++|..++  ||..+.+++..+.+.|.  + ..+.++|+++|.++||.+..+
T Consensus         3 ~~~l~v~~MtC~~C~~~V~~al~~v~--gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~~   70 (71)
T COG2608           3 KTTLKVEGMTCGHCVKTVEKALEEVD--GVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEEI   70 (71)
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCC--CeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeeec
Confidence            4789999 999999999999999999  99999999999777666  4 479999999999999987653

>KOG4656|consensus

Probab=99.19  E-value=1.4e-10  Score=79.83  Aligned_cols=69  Identities=28%  Similarity=0.565  Sum_probs=64.5

Q ss_pred             eEEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeecCCC
Q psy7515          36 KVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGEGS  106 (106)
Q Consensus        36 ~~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~~~  106 (106)
                      -+.+|.|+|+|.+|++.|++.|..++  ||.++++|+..+.+.|.+...+.+|.++|+.+|.++.+.+.++
T Consensus         7 ~~~efaV~M~cescvnavk~~L~~V~--Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~G~G~   75 (247)
T KOG4656|consen    7 YEAEFAVQMTCESCVNAVKACLKGVP--GINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLRGAGK   75 (247)
T ss_pred             eeEEEEEechhHHHHHHHHHHhccCC--CcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEecCCc
Confidence            35789999999999999999999999  9999999999999999998999999999999999999987763

>KOG1603|consensus

Probab=99.07  E-value=2.1e-09  Score=63.09  Aligned_cols=65  Identities=42%  Similarity=0.756  Sum_probs=58.5

Q ss_pred             eEEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcC-CceEee
Q psy7515          36 KVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSG-KTCSYI  102 (106)
Q Consensus        36 ~~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G-~~~~~~  102 (106)
                      ....+.+.|+|.+|..+|++.|..+.  ||.++.+|...++++|.+..++..+++.|.+.| .....+
T Consensus         5 ~~~v~kv~~~C~gc~~kV~~~l~~~~--GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~   70 (73)
T KOG1603|consen    5 KTVVLKVNMHCEGCARKVKRVLQKLK--GVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELW   70 (73)
T ss_pred             cEEEEEECcccccHHHHHHHHhhccC--CeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEe
Confidence            45778888999999999999999999  999999999999999998899999999999887 555544

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.63  E-value=1.4e-07  Score=76.74  Aligned_cols=64  Identities=22%  Similarity=0.433  Sum_probs=56.4

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEee
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      +.+.++.|+ |+|++|+.+|+++|.+++  ||..+.+++.  +..+....+.+.+.+++++.||++...
T Consensus         2 ~~~~~l~V~gmtC~~C~~~i~~al~~~~--gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~   66 (834)
T PRK10671          2 SQTIDLTLDGLSCGHCVKRVKESLEQRP--DVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVS   66 (834)
T ss_pred             CeEEEEEECCcccHHHHHHHHHHHhcCC--CcceEEEeee--EEEEEecCCHHHHHHHHHhcCCccccc
Confidence            356889999 999999999999999999  9999999984  556666678899999999999998764

>PLN02957 copper, zinc superoxide dismutase

Probab=98.58  E-value=1e-06  Score=62.33  Aligned_cols=68  Identities=29%  Similarity=0.642  Sum_probs=60.0

Q ss_pred             eEEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeecCC
Q psy7515          36 KVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGEG  105 (106)
Q Consensus        36 ~~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~~  105 (106)
                      +++.|.+.|+|..|+.+|++.|.+++  ||..+.+++..+++.|........+...+++.||.+.+++.+
T Consensus         6 ~~~~~~VgMsC~~Ca~~Iek~L~~~~--GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~   73 (238)
T PLN02957          6 LLTEFMVDMKCEGCVAAVKNKLETLE--GVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIGQG   73 (238)
T ss_pred             EEEEEEECccCHHHHHHHHHHHhcCC--CeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEecCC
Confidence            45667778999999999999999999  999999999999998886678889999999999998876653

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.28  E-value=3.3e-06  Score=67.85  Aligned_cols=61  Identities=30%  Similarity=0.565  Sum_probs=54.4

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCC-HHHHHHHHHhcCCceE
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLD-PDVLLEAIKKSGKTCS  100 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~-~~~i~~~i~~~G~~~~  100 (106)
                      +..|.++ |+|..|+.+|+ +|++++  ||..+.+|+.++++.|..   ... .+.+...++..||.+.
T Consensus         3 ~~~l~v~Gm~Ca~C~~~ie-~l~~~~--gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~   68 (713)
T COG2217           3 ETSLSVEGMTCAACASRIE-ALNKLP--GVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSAR   68 (713)
T ss_pred             eeEEeecCcCcHHHHHHHH-HHhcCC--CeeEEEeecccceEEEEecccccccHHHHHHHHHhcCcccc
Confidence            4679999 99999999999 999999  999999999999998873   234 7899999999999764

>TIGR00003 copper ion binding protein

Probab=98.00  E-value=0.00018  Score=38.20  Aligned_cols=60  Identities=27%  Similarity=0.452  Sum_probs=50.1

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCce
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTC   99 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~   99 (106)
                      ..+.+. ++|..|...++..+....  ++....+++....+.+..   ......+...+...||.+
T Consensus         4 ~~~~v~~~~~~~c~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   67 (68)
T TIGR00003         4 FTVQVMSMTCQHCVDKIEKFVGELE--GVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYEV   67 (68)
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCC--CEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCCc
Confidence            568999 999999999999999999  999999999999887763   246777777778888864

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG0207|consensus

Probab=97.71  E-value=0.00014  Score=59.44  Aligned_cols=64  Identities=33%  Similarity=0.520  Sum_probs=58.3

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCceEe
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~~~  101 (106)
                      .+..|.|. |.|.+|..+|++.+.+++  ||.++++++.++++.|.   ....+..+.+.|+..||.+..
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~--gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~  213 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLR--GVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASV  213 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhcc--CeeEEEEeccCCceEEEecccccChHHHHHHHHhhccccee
Confidence            45889999 999999999999999999  99999999999999987   347999999999999998654

>KOG0207|consensus

Probab=97.67  E-value=0.00018  Score=58.95  Aligned_cols=66  Identities=29%  Similarity=0.496  Sum_probs=59.4

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCceEeecC
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      +..+.+. |+|.+|+..|++.|+..+  |+.++.+.+...+..+.   ...+++.+.+.+++.||.+..++.
T Consensus        70 ~~~l~v~GmtC~scv~~i~~~l~~~~--gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~~  139 (951)
T KOG0207|consen   70 KCYLSVNGMTCASCVATIERNLRKIE--GVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIES  139 (951)
T ss_pred             eeEEEecCceeHHHHHHHHHHhhccC--CcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehhc
Confidence            5779999 999999999999999999  99999999999999887   347899999999999999887554

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.54  E-value=0.00047  Score=56.43  Aligned_cols=63  Identities=24%  Similarity=0.451  Sum_probs=55.2

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEe
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~  101 (106)
                      +..+.+. |+|..|...+++.+..++  |+..+.+++..+++.+....+++.+.+.++..||.+.+
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~--GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~  163 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVP--GVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEA  163 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCC--CceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCccc
Confidence            4678899 999999999999999999  99999999999988776556778888889999998654

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.41  E-value=0.0014  Score=53.25  Aligned_cols=64  Identities=17%  Similarity=0.319  Sum_probs=52.7

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEec-CCHHHHHHHHHhcCCceEe
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST-LDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~-~~~~~i~~~i~~~G~~~~~  101 (106)
                      .+..+.+. |+|.+|...+++.+...+  ||..+.+++..+++.+... ...+.+...++..||.+..
T Consensus        53 ~r~~l~V~Gm~C~sCa~~Ie~aL~~~~--GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy~a~~  118 (741)
T PRK11033         53 TRYSWKVSGMDCPSCARKVENAVRQLA--GVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGFSLRD  118 (741)
T ss_pred             ceEEEEECCCCcHHHHHHHHHHHhcCC--CeeeEEEEcCCCeEEEEecccchHHHHHHHHhccccccc
Confidence            45778899 999999999999999999  9999999999998877622 1226777888889998654

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=92.59  E-value=1.1  Score=25.39  Aligned_cols=62  Identities=23%  Similarity=0.387  Sum_probs=46.0

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEe
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~  101 (106)
                      ..+.+. +.|..|...++..+....  ++....++.......+..   ......+...+...||.+++
T Consensus        25 ~~~~~~~~~c~~c~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   90 (92)
T TIGR02052        25 VTLEVPGMTCVACPITVETALQKVD--GVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPSSL   90 (92)
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCC--CEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            456788 999999999999999888  888788887777655541   23555565666778887544

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>PF01206 TusA: Sulfurtransferase TusA; InterPro: IPR001455 SirA functions as a response regulator as part of a two-component system, where BarA is the sensor kinase

Probab=92.12  E-value=0.6  Score=26.36  Aligned_cols=53  Identities=9%  Similarity=0.178  Sum_probs=38.5

Q ss_pred             EEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEee
Q psy7515          39 VFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        39 ~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      ++.+. +.|+.....+.++|.+++           ....+.|.  .......|...++..||.+..+
T Consensus         2 ~lD~rg~~CP~Pll~~~~~l~~l~-----------~G~~l~v~~d~~~~~~di~~~~~~~g~~~~~~   57 (70)
T PF01206_consen    2 TLDLRGLSCPMPLLKAKKALKELP-----------PGEVLEVLVDDPAAVEDIPRWCEENGYEVVEV   57 (70)
T ss_dssp             EEECSS-STTHHHHHHHHHHHTSG-----------TT-EEEEEESSTTHHHHHHHHHHHHTEEEEEE
T ss_pred             EEeCCCCCCCHHHHHHHHHHHhcC-----------CCCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence            35566 889999999999999987           23344444  3356788999999999985544

This system increases the expression of virulence genes and decreases the expression of motility genes []. BarA phosphorylates SirA, thereby activating the protein. Phosphorylated SirA directly activates virulence expression by interacting with hilA and hilC promoters, while repressing the flagellar regulon indirectly by binding to the csrB promoter, which in turn affects flagellar gene expression. Orthologues of SirA from Salmonella spp. can be found throughout proteobacteria, such as GacA in Psuedomonas spp., VarA in Vibrio cholerae, ExpA in Erwinia carotovora, LetA in Legionella pneumophila, and UvrY in Escherichia coli []. A sensor kinase for SirA is present in each of these organisms as well; the sensor kinase is known as BarA in E. coli and Salmonella spp., but has different names in other genera. In different species, SirA/BarA orthologues are required for virulence gene expression, exoenzyme and antibiotic production, motility, and biofilm formation. The structure of SirA consists of an alpha/beta sandwich with a beta-alpha-beta-alpha-beta(2) fold, comprising a mixed four-stranded beta-sheet stacked against two alpha-helices, both of which are nearly parallel to the strands of the beta-sheet []. Several uncharacterised bacterial proteins (73 to 81 amino-acid residues in length) that contain a well-conserved region in their N-terminal region show structural similarity to the SirA protein, including the E. coli protein YedF (P0AA31 from SWISSPROT), and other members of the UPF0033 family.; GO: 0016783 sulfurtransferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 3LVJ_D 3LVK_B 1DCJ_A 3HZ7_A 1JDQ_A 1JE3_A 1PAV_A.

>PRK13748 putative mercuric reductase; Provisional

Probab=91.07  E-value=2.5  Score=33.10  Aligned_cols=63  Identities=27%  Similarity=0.543  Sum_probs=47.3

Q ss_pred             EEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe--cCCHHHHHHHHHhcCCceEeec
Q psy7515          39 VFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS--TLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        39 ~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~--~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      .+.+. ++|..|...++..+...+  ++....+++......+..  ......+...+...|+.....+
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~--gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~~~g~~~~~~~   68 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVP--GVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLGYRATLAD   68 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCC--CeeEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCeeeccC
Confidence            35678 999999999999999998  988888888888766552  2355566666777787655443

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=87.15  E-value=5  Score=24.53  Aligned_cols=64  Identities=19%  Similarity=0.272  Sum_probs=42.2

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEc-----CCCe--EEEEe-cCCHHHHHHHHHhcCCceEe
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSL-----PDQT--VKVKS-TLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~-----~~~~--v~V~~-~~~~~~i~~~i~~~G~~~~~  101 (106)
                      +++.+.+. .+-..-.--+-+.|.+++  ||..|++.+     .+..  ++|.+ .++.++|.+.|++.|..++.
T Consensus         6 RRlVLDvlKP~~~p~ive~A~~lskl~--gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE~~Gg~IHS   78 (97)
T COG1888           6 RRLVLDVLKPHRGPTIVELALELSKLE--GVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIEELGGAIHS   78 (97)
T ss_pred             eeeeeeecCCcCCCcHHHHHHHHhhcC--CcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHHHcCCeeee
Confidence            44556665 443444556667788888  988776433     3333  33443 48999999999999986654

>PRK11018 hypothetical protein; Provisional

Probab=85.26  E-value=5.5  Score=23.21  Aligned_cols=53  Identities=13%  Similarity=0.080  Sum_probs=40.6

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEe
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~  101 (106)
                      +++.+. ..|+.-..+.+++|.+++           ..+.+.|.  .......|...++..||.+..
T Consensus         9 ~~lD~rG~~CP~Pvl~~kk~l~~l~-----------~G~~L~V~~d~~~a~~di~~~~~~~G~~v~~   64 (78)
T PRK11018          9 YRLDMVGEPCPYPAVATLEALPQLK-----------KGEILEVVSDCPQSINNIPLDARNHGYTVLD   64 (78)
T ss_pred             eeEECCCCcCCHHHHHHHHHHHhCC-----------CCCEEEEEeCCccHHHHHHHHHHHcCCEEEE
Confidence            567777 999999999999999997           23344444  335677888889999998764

>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function

Probab=84.17  E-value=7.5  Score=23.88  Aligned_cols=63  Identities=19%  Similarity=0.309  Sum_probs=41.8

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEc-----CCCeEEE--Eec-CCHHHHHHHHHhcCCceEe
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSL-----PDQTVKV--KST-LDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~-----~~~~v~V--~~~-~~~~~i~~~i~~~G~~~~~  101 (106)
                      +++.|.|- .+-+. .--+-+.|..++  ||..+++..     .+..+.|  .+. ++.++|.++|++.|-.++.
T Consensus         5 rRlVLDVlKP~~p~-i~e~A~~l~~~~--gV~gVnitv~EvD~ete~lkitiEG~~id~d~i~~~Ie~~Gg~IHS   76 (95)
T PF02680_consen    5 RRLVLDVLKPHEPS-IVELAKALSELE--GVDGVNITVVEVDVETENLKITIEGDDIDFDEIKEAIEELGGVIHS   76 (95)
T ss_dssp             EEEEEEEEEESSS--HHHHHHHHHTST--TEEEEEEEEEEE-SSEEEEEEEEEESSE-HHHHHHHHHHTT-EEEE
T ss_pred             eEEEEEeecCCCCC-HHHHHHHHHhCC--CcceEEEEEEEeeccccEEEEEEEeCCCCHHHHHHHHHHcCCeEEe
Confidence            45667776 54333 556778899999  998877543     3344433  344 8999999999999987654

; PDB: 3BPD_I 2RAQ_F 2X3D_E.

>cd03421 SirA_like_N SirA_like_N, a protein of unknown function with an N-terminal SirA-like domain

Probab=82.28  E-value=6.3  Score=21.92  Aligned_cols=51  Identities=12%  Similarity=0.181  Sum_probs=35.3

Q ss_pred             EEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEeec
Q psy7515          41 KAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        41 ~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      .+. +.|+.-...+.++| ++.  .         .+.+.|.  .......|..-+++.||.+...+
T Consensus         3 D~rG~~CP~P~l~~k~al-~~~--~---------g~~l~v~~d~~~s~~~i~~~~~~~G~~~~~~~   56 (67)
T cd03421           3 DARGLACPQPVIKTKKAL-ELE--A---------GGEIEVLVDNEVAKENVSRFAESRGYEVSVEE   56 (67)
T ss_pred             ccCCCCCCHHHHHHHHHH-hcC--C---------CCEEEEEEcChhHHHHHHHHHHHcCCEEEEEe
Confidence            344 78999999999999 665  1         2233333  33456788889999999885443

The SirA, YedF, YeeD protein family is present in bacteria as well as archaea. SirA (also known as UvrY, and YhhP) belongs to a family of a two-component response regulators that controls secondary metabolism and virulence. The other member of this two-component system is a sensor kinase called BarA which phosphorylates SirA. A variety of microorganisms have similar proteins, all of which contain a common CPxP sequence motif in the N-terminal region. YhhP is suggested to be important for normal cell division and growth in rich nutrient medium. Moreover, despite a low primary sequence similarity, the YccP structure closely resembles the non-homologous C-terminal RNA-binding domain of E. coli translation initiation factor IF3. The signature CPxP motif serves to stabilize the N-terminal helix as part of the N-capping box and might be important in mRNA-binding.

>cd03420 SirA_RHOD_Pry_redox SirA_RHOD_Pry_redox

Probab=80.72  E-value=8.1  Score=21.81  Aligned_cols=51  Identities=18%  Similarity=0.227  Sum_probs=37.8

Q ss_pred             EEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEee
Q psy7515          41 KAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        41 ~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      .+. +.|+.-.....++|.+++           ..+.+.|.  .......|..-.+..||.+...
T Consensus         3 D~rG~~CP~Pvl~~kkal~~l~-----------~G~~l~V~~d~~~a~~di~~~~~~~G~~~~~~   56 (69)
T cd03420           3 DACGLQCPGPILKLKKEIDKLQ-----------DGEQLEVKASDPGFARDAQAWCKSTGNTLISL   56 (69)
T ss_pred             ccCCCcCCHHHHHHHHHHHcCC-----------CCCEEEEEECCccHHHHHHHHHHHcCCEEEEE
Confidence            344 789999999999999986           23344444  3356788888999999987643

SirA-like domain located within a multidomain protein of unknown function. Other domains include RHOD (rhodanese homology domain), and Pry_redox (pyridine nucleotide-disulphide oxidoreductase) as well as a C-terminal domain that corresponds to COG2210. This fold is referred to as a two-layered alpha/beta sandwich, structurally similar to that of translation initiation factor 3.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	106
1fe4_A	68	Crystal Structure Of Mercury-Hah1 Length = 68		2e-08
3cjk_A	68	Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Le		2e-08
1cc7_A	73	Crystal Structure Of The Atx1 Metallochaperone Prot		5e-07
1fd8_A	73	Solution Structure Of The Cu(I) Form Of The Yeast M		5e-07
2roe_A	66	Solution Structure Of Thermus Thermophilus Hb8 Ttha		3e-04

>pdb|1FE4|A Chain A, Crystal Structure Of Mercury-Hah1 Length = 68

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
           H F  +MTC GC+ A++R+L+++   G    +  LP++ V ++S    D LL  +KK+GK
Sbjct: 4   HEFSVDMTCGGCAEAVSRVLNKL---GGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGK 60
Query: 98  TCSYIG 103
           T SY+G
Sbjct: 61  TVSYLG 66

>pdb|3CJK|A Chain A, Crystal Structure Of The Adduct Hah1-Cd(Ii)-Mnk1 Length = 68

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
           H F  +MTC GC+ A++R+L+++   G    +  LP++ V ++S    D LL  +KK+GK
Sbjct: 3   HEFSVDMTCGGCAEAVSRVLNKL---GGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGK 59
Query: 98  TCSYIG 103
           T SY+G
Sbjct: 60  TVSYLG 65

>pdb|1CC7|A Chain A, Crystal Structure Of The Atx1 Metallochaperone Protein Length = 73

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 34 MAKV--HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEA 91
          MA++  + F   MTC GCS A+ ++L ++ +  V  ++ SL  Q V V +TL  D +LE 
Sbjct: 1  MAEIKHYQFNVVMTCSGCSGAVNKVLTKL-EPDVSKIDISLEKQLVDVYTTLPYDFILEK 59
Query: 92 IKKSGK 97
          IKK+GK
Sbjct: 60 IKKTGK 65

>pdb|1FD8|A Chain A, Solution Structure Of The Cu(I) Form Of The Yeast Metallochaperone, Atx1 Length = 73

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 36 KVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKS 95
          K + F   MTC GCS A+ ++L ++ +  V  ++ SL  Q V V +TL  D +LE IKK+
Sbjct: 5  KHYQFNVVMTCSGCSGAVNKVLTKL-EPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKT 63
Query: 96 GK 97
          GK
Sbjct: 64 GK 65

>pdb|2ROE|A Chain A, Solution Structure Of Thermus Thermophilus Hb8 Ttha1718 Protein In Vitro Length = 66

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSG 96
          MTC+ C  A+T+ L ++   GVE VE SL      V+ T DP  L++A+++ G
Sbjct: 9  MTCNHCVMAVTKALKKVP--GVEKVEVSLEKGEALVEGTADPKALVQAVEEEG 59

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	106
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	1e-22
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	2e-20
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	3e-19
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	2e-16
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	9e-15
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	2e-10
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	3e-10
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	4e-10
2kkh_A	95	Putative heavy metal transporter; zinc transport,	2e-08
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	4e-08
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	1e-07
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	1e-07
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	1e-07
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	1e-07
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	2e-07
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	4e-04
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	2e-07
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	3e-07
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	4e-07
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	5e-07
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	5e-07
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	6e-07
2kyz_A	67	Heavy metal binding protein; structural genomics,	7e-07
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	9e-07
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	3e-06
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	1e-06
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	1e-06
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	2e-06
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	1e-06
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	1e-06
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	2e-06
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	2e-06
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	5e-06
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	9e-06
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	2e-05
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	2e-05
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	3e-05
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	9e-05
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	3e-04

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 83.0 bits (205), Expect = 1e-22
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 19  ASKSPEGTGLDNEPTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVK 78
           +  S   +   N+ T+  +  F  +MTC  C  A+ + L  +   GV+ VE  L DQ V 
Sbjct: 3   SGSSGMASDSGNQGTLCTLE-FAVQMTCQSCVDAVRKSLQGVA--GVQDVEVHLEDQMVL 59

Query: 79  VKSTLDPDVLLEAIKKSGKTCSYIGEGS 106
           V +TL    +   ++ +G+     G GS
Sbjct: 60  VHTTLPSQEVQALLEGTGRQAVLKGMGS 87

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 76.7 bits (189), Expect = 2e-20
 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 36  KVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKS 95
           K + F   MTC GCS A+ ++L ++ +  V  ++ SL  Q V V +TL  D +LE IKK+
Sbjct: 5   KHYQFNVVMTCSGCSGAVNKVLTKL-EPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKT 63

Query: 96  GKTCS 100
           GK   
Sbjct: 64  GKEVR 68

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 73.6 bits (181), Expect = 3e-19
 Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 4/70 (5%)

Query: 34  MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIK 93
           M K H F  +MTC GC+ A++R+L+++   GV+  +  LP++ V ++S    D LL  +K
Sbjct: 1   MPK-HEFSVDMTCGGCAEAVSRVLNKLG--GVK-YDIDLPNKKVCIESEHSMDTLLATLK 56

Query: 94  KSGKTCSYIG 103
           K+GKT SY+G
Sbjct: 57  KTGKTVSYLG 66

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 70.1 bits (171), Expect = 2e-16
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 39  VFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKT 98
            +   M C+ C + I   L  +   G+ S+   +  Q + V+S++ P  ++  ++  GK 
Sbjct: 9   TYAIPMHCENCVNDIKACLKNVP--GINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKD 66

Query: 99  CSYIGEGS 106
               G G 
Sbjct: 67  AIIRGAGK 74

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 66.3 bits (161), Expect = 9e-15
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 34  MAKVHVFKAE----MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLL 89
           M     ++A     M C+ C + I   L  +   G+ S+   +  Q + V+S++ P  ++
Sbjct: 1   MTTNDTYEATYAIPMHCENCVNDIKACLKNVP--GINSLNFDIEQQIMSVESSVAPSTII 58

Query: 90  EAIKKSGKTCSYIGEGS 106
             ++  GK     G G 
Sbjct: 59  NTLRNCGKDAIIRGAGK 75

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 51.5 bits (124), Expect = 2e-10
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSG 96
          MTC+ C  A+T+ L ++   GVE VE SL      V+ T DP  L++A+++ G
Sbjct: 9  MTCNHCVMAVTKALKKVP--GVEKVEVSLEKGEALVEGTADPKALVQAVEEEG 59

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 51.4 bits (123), Expect = 3e-10
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 3/74 (4%)

Query: 24 EGTGLDNEPTMAKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST 82
            +G +N         F  E MTC  C+  I   +++       +V      +TV V   
Sbjct: 10 HSSGRENLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTV--PGAAVHADPASRTVVVGGV 67

Query: 83 LDPDVLLEAIKKSG 96
           D   + E I  +G
Sbjct: 68 SDAAHIAEIITAAG 81

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 50.4 bits (121), Expect = 4e-10
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSG 96
          + C+ C+ A+T+ +         +V+  L  + V + S L  + L  AI  +G
Sbjct: 10 IACEACAEAVTKAVQNED--AQATVQVDLTSKKVTITSALGEEQLRTAIASAG 60

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95

 Score = 47.1 bits (112), Expect = 2e-08
 Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 6/91 (6%)

Query: 19  ASKSPEGTGLDNEPTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVK 78
           A ++ E         + K +     + C      I  IL  +   GV+     +P +TV 
Sbjct: 1   ALQNKEEEK-KKVKKLQKSYFDVLGICCTSEVPIIENILKSL--DGVKEYSVIVPSRTVI 57

Query: 79  VK---STLDPDVLLEAIKKSGKTCSYIGEGS 106
           V      + P  + +A+ ++    +    G 
Sbjct: 58  VVHDSLLISPFQIAKALNEARLEANVRVNGE 88

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69

 Score = 45.4 bits (108), Expect = 4e-08
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 5/66 (7%)

Query: 34 MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLE 90
          M +  +    M+C  C  A+   +  +   GV +V  +L    V V      +    + +
Sbjct: 1  MEQKTLQVEGMSCQHCVKAVETSVGEL--DGVSAVHVNLEAGKVDVSFDADKVSVKDIAD 58

Query: 91 AIKKSG 96
          AI+  G
Sbjct: 59 AIEDQG 64

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69

 Score = 44.2 bits (105), Expect = 1e-07
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQT--VKVKSTLDPDVLLEAIKKSG 96
          MTCD C++ +   L+++   GV+S   S P  T  + +     PD L  A+   G
Sbjct: 9  MTCDSCAAHVKEALEKV--PGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLG 61

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74

 Score = 44.2 bits (105), Expect = 1e-07
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 34 MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLE 90
          M K+ V    MTC  CS+++   L  +   GV     +L      V    + +  + + E
Sbjct: 1  MRKIQVGVTGMTCAACSNSVEAALMNV--NGVFKASVALLQNRADVVFDPNLVKEEDIKE 58

Query: 91 AIKKSG 96
           I+ +G
Sbjct: 59 EIEDAG 64

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71

 Score = 44.2 bits (105), Expect = 1e-07
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 5/66 (7%)

Query: 34 MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLE 90
          +    +    M C  C+S+I R L+R+  KGV     ++    + V      +    + E
Sbjct: 2  LKTQQMQVGGMRCAACASSIERALERL--KGVAEASVTVATGRLTVTYDPKQVSEITIQE 59

Query: 91 AIKKSG 96
           I   G
Sbjct: 60 RIAALG 65

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71

 Score = 44.2 bits (105), Expect = 1e-07
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 32 PTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVL 88
            M ++ +    M+C  C +AI   +  +   GVE V+  L + TV+V    S +    +
Sbjct: 2  NAMEQLTLQVEGMSCGHCVNAIESSVKEL--NGVEQVKVQLAEGTVEVTIDSSVVTLKDI 59

Query: 89 LEAIKKSG 96
          +  I+  G
Sbjct: 60 VAVIEDQG 67

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 46.2 bits (109), Expect = 2e-07
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 44  MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCS 100
           MTC  C  +I  ++ ++  +GV+ +  SL + T  V    + + P+ L  AI+  G   S
Sbjct: 131 MTCASCVHSIEGMISQL--EGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEAS 188

Query: 101 YIGEGS 106
            + E  
Sbjct: 189 VVSESC 194

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202

 Score = 36.9 bits (85), Expect = 4e-04
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 5/69 (7%)

Query: 32 PTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVL 88
            +  + +    M C  C   I   + ++   GV+S++ SL ++T +VK   S   P  L
Sbjct: 17 SHVVTLQLRIDGMHCKSCVLNIEENIGQL--LGVQSIQVSLENKTAQVKYDPSCTSPVAL 74

Query: 89 LEAIKKSGK 97
            AI+    
Sbjct: 75 QRAIEALPP 83

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90

 Score = 44.4 bits (105), Expect = 2e-07
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          M C  C S I   L  +  + V S+  SL +++  V    S++ P+ L +AI+   
Sbjct: 12 MHCKSCVSNIESTLSAL--QYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVS 65

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79

 Score = 43.5 bits (103), Expect = 3e-07
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 5/72 (6%)

Query: 28 LDNEPTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLD 84
          +D    +  V +    MTC+ C   I + + ++   GV  ++ SL ++   +        
Sbjct: 1  MDPSMGVNSVTISVEGMTCNSCVWTIEQQIGKV--NGVHHIKVSLEEKNATIIYDPKLQT 58

Query: 85 PDVLLEAIKKSG 96
          P  L EAI   G
Sbjct: 59 PKTLQEAIDDMG 70

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68

 Score = 42.7 bits (101), Expect = 4e-07
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          M+C+ C + I   + R+   GV+ V+  L  +   VK   + +    + +AI + G
Sbjct: 9  MSCNHCVARIEEAVGRI--SGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELG 62

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72

 Score = 42.6 bits (101), Expect = 5e-07
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSG 96
          MTC  C++ I   L  +  KGV   + SL     +V   + +  D + E I+  G
Sbjct: 11 MTCSACTNTINTQLRAL--KGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCG 63

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75

 Score = 42.7 bits (101), Expect = 5e-07
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 34 MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLE 90
          +  V +    MTC+ C   I + + ++   GV  ++ SL ++   +        P  L E
Sbjct: 1  VNSVTISVEGMTCNSCVWTIEQQIGKV--NGVHHIKVSLEEKNATIIYDPKLQTPKTLQE 58

Query: 91 AIKKSG 96
          AI   G
Sbjct: 59 AIDDMG 64

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72

 Score = 42.6 bits (101), Expect = 6e-07
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC+ C  +I  ++ +    GV+S+  SL +    V+       P+ L  AI+  G
Sbjct: 12 MTCNSCVQSIEGVISKK--PGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMG 65

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67

 Score = 42.1 bits (99), Expect = 7e-07
 Identities = 13/60 (21%), Positives = 34/60 (56%), Gaps = 5/60 (8%)

Query: 38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSG 96
          +V     ++C+ C   I++ L+ +   GV++ E S+ ++ V V++  + D +L+ +++  
Sbjct: 3  YVLYVPDISCNHCKMRISKALEEL---GVKNYEVSVEEKKVVVETE-NLDSVLKKLEEID 58

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 43.6 bits (103), Expect = 9e-07
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 5/69 (7%)

Query: 31  EPTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDV 87
                K       MTC  C++ I + L+++  +GV +   +   +TV V+          
Sbjct: 70  HVVTEKAEFDIEGMTCAACANRIEKRLNKI--EGVANAPVNFALETVTVEYNPKEASVSD 127

Query: 88  LLEAIKKSG 96
           L EA+ K G
Sbjct: 128 LKEAVDKLG 136

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151

 Score = 42.4 bits (100), Expect = 3e-06
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C++ I + L RM   GV     +L  +TV V    +      + E I+K G
Sbjct: 15 MTCAACAARIEKGLKRM--PGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG 68

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 41.8 bits (99), Expect = 1e-06
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST--LDPDVLLEAIKKSG 96
          +TC+ C   I + +  +  +GV  ++ S+  ++V V+       D++ EA+  +G
Sbjct: 10 ITCNHCVDKIEKFVGEI--EGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAG 62

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 43.5 bits (103), Expect = 1e-06
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 44  MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
           MTC  C   I   L R    G+     +L      VK     + P  +++ I++ G
Sbjct: 89  MTCASCVHNIESKLTRT--NGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIG 142

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149

 Score = 42.3 bits (100), Expect = 2e-06
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C S I R L +    GV SV  +L     ++K     + P  + + I+  G
Sbjct: 13 MTCASCVSNIERNLQKE--AGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLG 66

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77

 Score = 41.9 bits (99), Expect = 1e-06
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C + I R L R   +G+ S+  +L     +V+   + + P ++ E I++ G
Sbjct: 12 MTCASCVANIERNLRRE--EGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELG 65

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84

 Score = 41.6 bits (98), Expect = 1e-06
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C+S I   + ++  +GV+ ++ SL +Q   +      +  + + + I+  G
Sbjct: 18 MTCHSCTSTIEGKIGKL--QGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMG 71

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71

 Score = 41.2 bits (97), Expect = 2e-06
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 5/66 (7%)

Query: 34 MAKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQT--VKVKSTLDPDVLLE 90
          MA+    + E M C  C+S+I R + ++   GV+S + +   +   V       P +L +
Sbjct: 1  MAQTINLQLEGMRCAACASSIERAIAKV--PGVQSCQVNFALEQAVVSYHGETTPQILTD 58

Query: 91 AIKKSG 96
          A++++G
Sbjct: 59 AVERAG 64

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72

 Score = 40.7 bits (96), Expect = 2e-06
 Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C   + + + ++  +GV  V+ +   +   V    +      L +A   +G
Sbjct: 12 MTCSACPITVKKAISKV--EGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAG 65

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73

 Score = 40.1 bits (94), Expect = 5e-06
 Identities = 10/53 (18%), Positives = 25/53 (47%), Gaps = 4/53 (7%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSG 96
          ++C  C + + + L+     G +  +  L +  V   +  D D  ++A++ +G
Sbjct: 14 LSCHHCVARVKKALEEA---GAKVEKVDLNEAVVAG-NKEDVDKYIKAVEAAG 62

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723

 Score = 41.7 bits (99), Expect = 9e-06
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C  +I   +  +  +GVE V  +L  +T  ++     +D + +   I+  G
Sbjct: 11 MTCAMCVKSIETAVGSL--EGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLG 64

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80

 Score = 38.8 bits (91), Expect = 2e-05
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C++ I + L+++  +GV +   +   +TV V+          L EA+ K G
Sbjct: 12 MTCAACANRIEKRLNKI--EGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLG 65

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C   I   L +   +G+     +L      +K     + P  ++  I+  G
Sbjct: 13 MTCASCVHKIESSLTKH--RGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLG 66

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76

 Score = 38.1 bits (89), Expect = 3e-05
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C++ I + L RM   GV     +L  +TV V    +      + E I+K G
Sbjct: 15 MTCAACAARIEKGLKRM--PGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG 68

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71

 Score = 35.5 bits (82), Expect = 3e-04
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 34 MAKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAI 92
          MA+  V++ + ++C  C++   R +  +  +GV     +     + V        + +A 
Sbjct: 1  MAEKTVYRVDGLSCTNCAAKFERNVKEI--EGVTEAIVNFGASKITVTGEASIQQVEQAG 58

Query: 93 KKSG 96
              
Sbjct: 59 AFEH 62

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	106
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.62
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.54
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.54
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.51
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.46
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.41
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.4
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.36
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.35
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.34
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.34
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.33
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.33
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.31
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.29
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.29
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.29
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.29
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.28
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.28
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.27
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.27
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.26
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.24
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.22
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.22
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.21
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.21
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.2
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.2
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.18
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.18
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.15
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	99.09
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	99.07
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	99.06
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.06
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	98.99
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.75
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.74
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.71
3lvj_C	82	Sulfurtransferase TUSA; protein-protein complex, s	86.93
2raq_A	97	Conserved protein MTH889; alpha-beta protein, stru	86.88
3bpd_A	100	Uncharacterized protein; heptamer, Mg+2 ION, PSI-2	85.43
1jdq_A	98	TM006 protein, hypothetical protein TM0983; struct	84.6
2x3d_A	96	SSO6206; unknown function; 2.70A {Sulfolobus solfa	83.73
3cq1_A	103	Putative uncharacterized protein TTHB138; DTDP-4-k	82.48
1uwd_A	103	Hypothetical protein TM0487; similar to PAAD prote	81.64

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.62  E-value=4.5e-15  Score=84.45  Aligned_cols=66  Identities=41%  Similarity=0.794  Sum_probs=61.2

Q ss_pred             EEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeecCC
Q psy7515          37 VHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGEG  105 (106)
Q Consensus        37 ~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~~  105 (106)
                      +.+|.|.|+|.+|+.+|+++|.+++  || .+.+|+.+++++|.+..+++.|.++|+++||.+.+++++
T Consensus         3 ~~~~~vgm~C~~C~~~i~~~l~~~~--gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~~   68 (68)
T 3iwl_A            3 KHEFSVDMTCGGCAEAVSRVLNKLG--GV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE   68 (68)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHC--SE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC-
T ss_pred             eEEEEECcCcHHHHHHHHHHHHcCC--Ce-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCCC
Confidence            4678889999999999999999999  99 999999999999998889999999999999999988764

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.54  E-value=7e-14  Score=80.15  Aligned_cols=67  Identities=19%  Similarity=0.316  Sum_probs=60.9

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEeec
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      |++..|.|+ |+|.+|+.+|+++|.+++  ||..+.+|+..+++.|..   ..+++.|.++|+++||.+.+++
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVN--GVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA   71 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTST--TEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCC--CEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence            356889999 999999999999999999  999999999999999973   2689999999999999998765

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.54  E-value=1.2e-13  Score=78.10  Aligned_cols=65  Identities=23%  Similarity=0.515  Sum_probs=59.8

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEee
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      +++.|.|+ |+|.+|+.+|+++|.+++  ||..+.+|+..+++.|.  ...+++.|.++|++.||++.++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVP--GVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTST--TEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCC--CeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence            35789999 999999999999999999  99999999999999998  5578999999999999998753

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.51  E-value=9.8e-14  Score=79.75  Aligned_cols=66  Identities=17%  Similarity=0.375  Sum_probs=61.1

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeecC
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      |.+.+|.|. |+|.+|+.+|+++|.+ +  ||..+.+|+..+++.|... +++.|.++|+++||.+.+.++
T Consensus         4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~--gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~   70 (73)
T 3fry_A            4 VEKIVLELSGLSCHHCVARVKKALEE-A--GAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS   70 (73)
T ss_dssp             CEEEEEEEESSBCGGGHHHHHHHHHH-T--TCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred             cEEEEEEECCCCCHHHHHHHHHHhcc-C--CcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence            566889999 9999999999999999 9  9999999999999999876 899999999999999988654

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=1.9e-12  Score=78.85  Aligned_cols=68  Identities=31%  Similarity=0.522  Sum_probs=61.9

Q ss_pred             eEEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeecCC
Q psy7515          36 KVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGEG  105 (106)
Q Consensus        36 ~~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~~  105 (106)
                      .++.|.|+|+|.+|+.+|+++|.+++  ||..+.+|+..+++.|....+++.|.++|+++||.+.++..+
T Consensus        19 ~~~~l~V~m~C~~C~~~Ie~aL~~l~--GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~   86 (98)
T 2crl_A           19 CTLEFAVQMTCQSCVDAVRKSLQGVA--GVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMG   86 (98)
T ss_dssp             EEEEEEECCCSHHHHHHHHHTTTTCT--TCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESC
T ss_pred             eEEEEEEeeECHHHHHHHHHHHHcCC--CceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCC
Confidence            45778888999999999999999999  999999999999999987788999999999999998876543

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.41  E-value=3.6e-12  Score=72.84  Aligned_cols=69  Identities=38%  Similarity=0.580  Sum_probs=61.1

Q ss_pred             ceEEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeecC
Q psy7515          35 AKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        35 ~~~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      +.+..|.|+|+|.+|+.+|+++|.+++ .||..+.+|+..+++.|....+++.|.++|+++||.+..+++
T Consensus         4 m~~~~~~v~m~C~~C~~~ie~~l~~~~-~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (73)
T 1cc8_A            4 IKHYQFNVVMTCSGCSGAVNKVLTKLE-PDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQ   72 (73)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTT-TSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEEE
T ss_pred             ceEEEEEEeeECHHHHHHHHHHHHhCC-CCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeeec
Confidence            455778888999999999999999983 189999999999999999778899999999999999887653

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.40  E-value=4.7e-12  Score=70.81  Aligned_cols=66  Identities=24%  Similarity=0.505  Sum_probs=57.7

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe--cCCHHHHHHHHHhcCCceEee
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS--TLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~--~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      +.+..|.|. |+|.+|+..|+++|.+++  ||..+.+|+..+++.|..  ..+.+.|.++|+.+||.+.++
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~   70 (71)
T 2xmw_A            2 AQTINLQLEGMRCAACASSIERAIAKVP--GVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   70 (71)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTST--TEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred             CcEEEEEECCcccHHHHHHHHHHHhcCC--CeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence            355789999 999999999999999999  999999999999998873  267889999999999987654

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.36  E-value=2.1e-12  Score=76.63  Aligned_cols=63  Identities=25%  Similarity=0.346  Sum_probs=57.9

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCce
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTC   99 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~   99 (106)
                      +.+..|.|. |+|.+|+..|+++|.+++  ||..+.+|+..+++.|....+++.|.++|+++||.+
T Consensus        21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~--GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           21 GAGLSFHVEDMTCGHCAGVIKGAIEKTV--PGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             -CEEEEECTTCCHHHHHHHHHHHHHHHS--TTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             ccEEEEEECCCCCHHHHHHHHHHHhcCC--CeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            455789999 999999999999999999  999999999999999987788999999999999975

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.35  E-value=2.7e-12  Score=71.58  Aligned_cols=62  Identities=37%  Similarity=0.641  Sum_probs=56.8

Q ss_pred             EEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEee
Q psy7515          39 VFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        39 ~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      .|.|. |+|.+|+.+|+++|.+++  ||..+.+|+..+++.|.+..+++.|.++|+++||.+..+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVP--GVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTST--TCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCC--CeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence            58899 999999999999999999  999999999999999965578899999999999987654

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.34  E-value=1.7e-11  Score=69.47  Aligned_cols=66  Identities=17%  Similarity=0.298  Sum_probs=58.0

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEec-CCHHHHHHHHHhcCCceEeec
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST-LDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~-~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      .++.|.|. |+|.+|+..|+++|.+++  ||..+.+|+..+++.|... ...+.|.++|..+||.+...+
T Consensus         3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~--gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~~   70 (73)
T 1mwy_A            3 TRYSWKVSGMDCAACARKVENAVRQLA--GVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDEQ   70 (73)
T ss_dssp             EEEEEEEESCCSTTHHHHHHHHHHTSS--SEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEECC
T ss_pred             eEEEEEECCcCCHHHHHHHHHHHhcCC--CeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCcccccc
Confidence            45789999 999999999999999999  9999999999999998743 247789999999999887654

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.34  E-value=1.8e-11  Score=68.61  Aligned_cols=63  Identities=25%  Similarity=0.466  Sum_probs=56.7

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCce
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTC   99 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~   99 (106)
                      +.+..|.|. |+|.+|+..|+++|.+++  ||..+.+++..+++.|..   ..+.+.|.+.|.++||.+
T Consensus         4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            4 MEQLTLQVEGMSCGHCVNAIESSVKELN--GVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             EEEEEEEEECCCSHHHHHHHHHHHHTST--TEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHHcCC--CeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            456789999 999999999999999999  999999999999998872   367889999999999975

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.33  E-value=3.6e-12  Score=69.92  Aligned_cols=60  Identities=22%  Similarity=0.445  Sum_probs=56.0

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCce
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTC   99 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~   99 (106)
                      ..|.|. |+|.+|+.+|+++|.+++  ||..+.+|+..+++.|....+.+.|.++|+++||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNED--AQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHC--TTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCC--CcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            568999 999999999999999999  999999999999999987678899999999999975

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.33  E-value=1.6e-11  Score=69.65  Aligned_cols=66  Identities=24%  Similarity=0.410  Sum_probs=58.7

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEeecC
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      +..|.|. |+|.+|+..|+++|.+++  ||..+.+++..+++.|..   ....+.|.+.|.++||.+.+...
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVN--GVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNI   72 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTST--TEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCC--CeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeecC
Confidence            4679999 999999999999999999  999999999999999873   25788999999999999876543

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.31  E-value=1.7e-11  Score=68.79  Aligned_cols=65  Identities=18%  Similarity=0.373  Sum_probs=57.8

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEee
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      .+..|.|. |+|.+|+..|+++|..++  ||..+.+|+..+++.|..   ..+.+.|.+.|..+||.+.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1osd_A            3 QTVTLSVPGMTCSACPITVKKAISKVE--GVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTST--TEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             eEEEEEECCeEcHHHHHHHHHHHhcCC--CeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEec
Confidence            34789999 999999999999999999  999999999999998873   357889999999999987653

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.29  E-value=4e-11  Score=66.00  Aligned_cols=61  Identities=23%  Similarity=0.443  Sum_probs=55.2

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCce
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTC   99 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~   99 (106)
                      +..|.|. |+|.+|+..|+++|..++  ||..+.+++..+++.|..   ..+.+.|.+.|..+||.+
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            3 QKTLQVEGMSCQHCVKAVETSVGELD--GVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEEECCCSHHHHHHHHHHHHTST--TEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCC--CeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            4679999 999999999999999999  999999999999999873   357889999999999975

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.29  E-value=2.8e-11  Score=67.82  Aligned_cols=64  Identities=27%  Similarity=0.491  Sum_probs=57.3

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEec---CCHHHHHHHHHhcCCceEee
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST---LDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~  102 (106)
                      +..|.|. |+|.+|+..|+++|.+++  ||..+.+++..+++.|...   ...+.|.+.|+.+||.+.+.
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   71 (72)
T 1aw0_A            4 ETVINIDGMTCNSCVQSIEGVISKKP--GVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             EEEEEEECCCHHHHHHHHHHHHHTST--TCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCC--CeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence            4679999 999999999999999999  9999999999999998733   57889999999999987653

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.29  E-value=2.8e-11  Score=72.09  Aligned_cols=66  Identities=27%  Similarity=0.394  Sum_probs=58.5

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhc---CCceEeecC
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKS---GKTCSYIGE  104 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~---G~~~~~~~~  104 (106)
                      ++.|.|. |+|.+|+.+|+++|.+++  ||..+.+|+..+++.|..   ..+.+.|.++|..+   ||.+.+.++
T Consensus         4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~--GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~   76 (90)
T 2g9o_A            4 TATFIIDGMHCKSCVSNIESTLSALQ--YVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSE   76 (90)
T ss_dssp             EEEEEEESCCHHHHHHHHHHHHTTCT--TEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCC
T ss_pred             EEEEEECCcCCHHHHHHHHHHHHcCC--CeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCC
Confidence            4679999 999999999999999999  999999999999999873   35788999999999   598876654

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.29  E-value=2.5e-11  Score=69.65  Aligned_cols=67  Identities=24%  Similarity=0.419  Sum_probs=59.6

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEeecC
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      .+..|.|. |+|.+|+.+|+++|.+++  ||..+.+++..+++.|..   ....+.|.++|+++||.+.+.+.
T Consensus         8 ~~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   78 (79)
T 1kvi_A            8 NSVTISVEGMTCNSCVWTIEQQIGKVN--GVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP   78 (79)
T ss_dssp             EEEEEEECCCCSTTTHHHHHHHHHHSS--SCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECCC
T ss_pred             EEEEEEECCccCHHHHHHHHHHHhcCC--CeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecCC
Confidence            45789999 999999999999999999  999999999999999873   25788999999999999877653

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.28  E-value=1.2e-11  Score=70.73  Aligned_cols=68  Identities=25%  Similarity=0.429  Sum_probs=59.8

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEeecC
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      |.+..|.|. |+|.+|+..|+++|.+++  ||..+.+++..+++.|..   ..+.+.|.++|..+||.+.....
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   73 (77)
T 1y3j_A            2 SSKCYIQVTGMTCASCVANIERNLRREE--GIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIEN   73 (77)
T ss_dssp             CEEEEEEESCGGGCSHHHHHHHHHTTSS--SEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEESC
T ss_pred             CEEEEEEECCeeCHHHHHHHHHHHhcCC--CeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECCc
Confidence            455789999 999999999999999999  999999999999999873   25788999999999999876543

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.28  E-value=2.9e-11  Score=67.48  Aligned_cols=62  Identities=29%  Similarity=0.522  Sum_probs=55.8

Q ss_pred             EEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe--cCCHHHHHHHHHhcCCceEee
Q psy7515          39 VFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS--TLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        39 ~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~--~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      .|.|. |+|.+|+.+|+++|.+++  ||..+.+|+..+++.|..  ....+.|.++|+++||.+.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   67 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVP--GVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA   67 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHST--TEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCC--CeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence            48899 999999999999999999  999999999999998873  257889999999999987654

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.27  E-value=4.2e-11  Score=67.58  Aligned_cols=66  Identities=29%  Similarity=0.418  Sum_probs=58.5

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEee
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      +.+..|.|. |+|.+|+..|+++|.+++  ||..+.+++..+++.|..   ..+.+.|.+.|..+||.+..+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMP--GVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTST--TEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHhcCC--CeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            345789999 999999999999999999  999999999999999873   357889999999999987654

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.27  E-value=2.6e-11  Score=70.85  Aligned_cols=67  Identities=24%  Similarity=0.412  Sum_probs=59.5

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEeecC
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      .++.|.|. |+|.+|+.+|+++|.+++  ||..+.+|+..+++.|..   ....+.|.+.|+.+||.+.+...
T Consensus         9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~--GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   79 (84)
T 1q8l_A            9 VVLKMKVEGMTCHSCTSTIEGKIGKLQ--GVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             EEEEEEECCTTTCSSCHHHHHHHHTCT--TEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCC--CeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence            45789999 999999999999999999  999999999999999873   35788999999999999876543

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.26  E-value=3.3e-11  Score=66.73  Aligned_cols=62  Identities=24%  Similarity=0.477  Sum_probs=55.8

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEe
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~  101 (106)
                      ..|.|. |+|.+|...|+++|.+++  ||..+.+++..+++.|..   ..+.+.|.+.+++.||.+..
T Consensus         2 ~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   67 (68)
T 1cpz_A            2 QEFSVKGMSCNHCVARIEEAVGRIS--GVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             CEEEESCCCSSSHHHHHHHHHHTST--TEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEEECCeeCHHHHHHHHHHHHcCC--CeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence            358899 999999999999999999  999999999999999873   35788999999999998765

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.24  E-value=5.5e-11  Score=66.61  Aligned_cols=65  Identities=26%  Similarity=0.500  Sum_probs=58.2

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe--cCCHHHHHHHHHhcCCceEeec
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS--TLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~--~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      +..|.|+ |+|.+|+..|+++|.+++  ||..+.+++..+++.|..  ..+.+.|.+.|++.||.+.++.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALK--GVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSS--SEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCC--CeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence            3679999 999999999999999999  999999999999998873  3578899999999999987764

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.22  E-value=4e-11  Score=66.02  Aligned_cols=60  Identities=23%  Similarity=0.526  Sum_probs=54.3

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEec--CCHHHHHHHHHhcCCce
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST--LDPDVLLEAIKKSGKTC   99 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~--~~~~~i~~~i~~~G~~~   99 (106)
                      ..|.|. |+|.+|+..|+++|.+++  ||..+.+++..+++.|...  .+.+.|.++|+++||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            3 ATFQVPSITCNHCVDKIEKFVGEIE--GVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV   65 (66)
T ss_dssp             EEECCTTCSCSHHHHHHHHHHTTSS--SEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCC--CceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence            568899 999999999999999999  9999999999999998732  47889999999999974

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.22  E-value=6.9e-11  Score=67.58  Aligned_cols=66  Identities=29%  Similarity=0.459  Sum_probs=58.2

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEeec
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      .+..|.|. |+|.+|+..|+++|.+++  ||..+.+|+..+++.|..   ..+.+.|.+.|..+||.+....
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   72 (80)
T 1jww_A            3 EKAEFDIEGMTCAACANRIEKRLNKIE--GVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG   72 (80)
T ss_dssp             EEEEEEEESCCCHHHHHHHHHHHHTST--TEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred             eEEEEEECCccCHHHHHHHHHHHhcCC--CeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence            45789999 999999999999999999  999999999999999873   3578899999999999876643

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.21  E-value=5.9e-11  Score=65.87  Aligned_cols=63  Identities=27%  Similarity=0.469  Sum_probs=56.1

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceE
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCS  100 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~  100 (106)
                      .+..|.|. |+|.+|+..|+++|..++  ||..+.+++..+++.|..   ..+.+.|.+.+..+||.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (71)
T 2ldi_A            3 KTQQMQVGGMRCAACASSIERALERLK--GVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA   69 (71)
T ss_dssp             EEEEEEEETCTTSGGGHHHHTGGGGCS--SEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred             EEEEEEECCccCHHHHHHHHHHHhcCC--CeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            34679999 999999999999999999  999999999999999873   3567889999999999864

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.20  E-value=7.3e-11  Score=66.60  Aligned_cols=65  Identities=22%  Similarity=0.394  Sum_probs=57.2

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEec---CCHHHHHHHHHhcCCceEeec
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST---LDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      +..|.|. |+|.+|+..|+++|.+++  ||..+.+++..+++.|...   ...+.|.++|..+||.+....
T Consensus         5 ~~~~~v~gm~C~~c~~~i~~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   73 (75)
T 1yjr_A            5 VLELVVRGMTCASCVHKIESSLTKHR--GILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLVK   73 (75)
T ss_dssp             CEEEEEETCCTTTHHHHHHHHHTTST--TEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEESS
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCC--CEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceeec
Confidence            3679999 999999999999999999  9999999999999998733   456889999999999876543

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.20  E-value=1.5e-10  Score=69.18  Aligned_cols=69  Identities=20%  Similarity=0.328  Sum_probs=60.3

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEec---CCHHHHHHHHHhcCCceEeecCC
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST---LDPDVLLEAIKKSGKTCSYIGEG  105 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~---~~~~~i~~~i~~~G~~~~~~~~~  105 (106)
                      +.+..|.|. |+|.+|+..|+++|..++  ||..+.+++..+.+.|...   +..+.|..+|..+||.+.+...+
T Consensus        15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~--GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~   87 (95)
T 2kkh_A           15 LQKSYFDVLGICCTSEVPIIENILKSLD--GVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVNG   87 (95)
T ss_dssp             SEEEEEEETTCCTTTTHHHHHHHHHHSS--SEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCCC
T ss_pred             eEEEEEEECCcCCHHHHHHHHHHHhcCC--CeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecCC
Confidence            445789999 999999999999999999  9999999999999998732   47889999999999998765543

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.18  E-value=1.5e-10  Score=80.01  Aligned_cols=67  Identities=22%  Similarity=0.552  Sum_probs=60.6

Q ss_pred             EEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeecCC
Q psy7515          37 VHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGEG  105 (106)
Q Consensus        37 ~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~~  105 (106)
                      +.+|.|+|+|.+|+.+|+++|.+++  ||..+.+|+..+++.|....+++.|.++|+++||.+.+...+
T Consensus         7 ~~~l~V~MtC~~Ca~~IekaL~~l~--GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~   73 (222)
T 1qup_A            7 EATYAIPMHCENCVNDIKACLKNVP--GINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG   73 (222)
T ss_dssp             EEEEECCCCSTTHHHHHHHHHTTCT--TEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCS
T ss_pred             EEEEEEccccHHHHHHHHHHHhcCC--CeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCC
Confidence            3567777999999999999999999  999999999999999987788999999999999998776543

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.18  E-value=1.4e-10  Score=73.69  Aligned_cols=65  Identities=23%  Similarity=0.362  Sum_probs=58.3

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEee
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      .++.|.|. |+|.+|+.+|+++|.+++  ||..+.+|+..+++.|..   ..+++.|.++|+++||.+.+.
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~  148 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTN--GITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLA  148 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSS--SCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEECC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCC--CeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEec
Confidence            35789999 999999999999999999  999999999999999973   257899999999999987653

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.15  E-value=1.6e-10  Score=73.90  Aligned_cols=67  Identities=30%  Similarity=0.470  Sum_probs=60.1

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEeecC
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      .++.|.|. |+|.+|+.+|+++|.+++  ||..+.+|+..+++.|..   ..+++.|.++|+++||.+.+...
T Consensus        74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~  144 (151)
T 1p6t_A           74 EKAEFDIEGMTCAACANRIEKRLNKIE--GVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE  144 (151)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSS--SEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred             cccEEEecCCCCHHHHHHHHHHHhcCC--CceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCc
Confidence            45789999 999999999999999999  999999999999999873   36889999999999999877543

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.09  E-value=4.4e-10  Score=78.94  Aligned_cols=66  Identities=21%  Similarity=0.527  Sum_probs=59.8

Q ss_pred             EEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeecC
Q psy7515          37 VHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        37 ~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      ++.|.|+|+|.+|+.+|+++|.+++  ||..+.+|+..+++.|....+++.|.++|+++||.+.+.+.
T Consensus         8 ~~~l~V~MtC~~Ca~~IekaL~~l~--GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~   73 (249)
T 1jk9_B            8 EATYAIPMHCENCVNDIKACLKNVP--GINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA   73 (249)
T ss_dssp             EEEEECCCCSSSHHHHHHHHHTTCT--TEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEE
T ss_pred             eEEEEEeeccHHHHHHHHHHHhccC--CeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccC
Confidence            3567777999999999999999999  99999999999999998778899999999999999876543

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=99.07  E-value=4.4e-10  Score=63.23  Aligned_cols=59  Identities=14%  Similarity=0.447  Sum_probs=50.7

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceE
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCS  100 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~  100 (106)
                      .+..|.|. |+|.+|+..|+++|.+++  ||..+.+|+..+++.|.....    .+.|.++||.+.
T Consensus         3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~--gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~   62 (71)
T 2aj0_A            3 EKTVYRVDGLSCTNCAAKFERNVKEIE--GVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEH   62 (71)
T ss_dssp             CEEEEEEESCCCHHHHHHHHHHHHHST--TEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTT
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCC--CeEEEEEECCCCEEEEEecCc----HHHHHHhCCCcc
Confidence            35789999 999999999999999999  999999999999999886543    456778888644

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=99.06  E-value=9e-10  Score=74.09  Aligned_cols=66  Identities=26%  Similarity=0.503  Sum_probs=58.8

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEeec
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      .++.|.|. |+|.+|+.+|+++|.+++  ||..+.+++..+++.|..   ...++.|.++|+++||.+.+..
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~--GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  191 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLE--GVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVS  191 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSS--SEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC-
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCC--CeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcC
Confidence            45789999 999999999999999999  999999999999999873   3578999999999999987654

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.06  E-value=3.9e-10  Score=62.85  Aligned_cols=62  Identities=21%  Similarity=0.407  Sum_probs=54.4

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeec
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      ..|.|. |+|.+|+.+|+++|.++   ||..+.+|+..+++.|..... +.|..+|+++||.+..+.
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~---gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~~~   65 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL---GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVESYQ   65 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH---TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCBCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc---CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceeeEe
Confidence            568999 99999999999999987   899999999999999985544 889999999999876553

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=98.99  E-value=2.3e-09  Score=68.01  Aligned_cols=65  Identities=26%  Similarity=0.390  Sum_probs=58.0

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEe
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~  101 (106)
                      |.++.|.|. |+|.+|+..|+++|.+++  ||..+.+++..+++.|..   ..+++.|.+.|.+.||.+..
T Consensus         3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   71 (149)
T 2ew9_A            3 PQKCFLQIKGMTCASCVSNIERNLQKEA--GVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAV   71 (149)
T ss_dssp             CEEEEEEEECCCSSSHHHHHHHHHHTTS--SCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred             cEEEEEEECCeecHHHHHHHHHHHhcCC--CcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEe
Confidence            456889999 999999999999999999  999999999999998863   35788999999999998764

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.75  E-value=3e-08  Score=78.30  Aligned_cols=62  Identities=23%  Similarity=0.408  Sum_probs=57.0

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCceEe
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~~~  101 (106)
                      .+|.|+ |+|.+|+.+|+++|.+++  ||.++++|+.++++.|..   ..++++|.+++++.||++..
T Consensus         4 ~~l~V~GM~Ca~Ca~~Ie~~L~~~~--GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~   69 (723)
T 3j09_A            4 RTVRVTGMTCAMCVKSIETAVGSLE--GVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVD   69 (723)
T ss_dssp             EEEEEETCCSHHHHHHHHHHHHTST--TEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESS
T ss_pred             EEEEeCCCCchHHHHHHHHHHhcCC--CceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccc
Confidence            679999 999999999999999999  999999999999999973   36899999999999998754

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.74  E-value=6.2e-08  Score=61.61  Aligned_cols=62  Identities=31%  Similarity=0.469  Sum_probs=54.5

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhcCCce
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKSGKTC   99 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~G~~~   99 (106)
                      .+..|.|. |+|.+|+..|++.|.+++  ||..+.+++..+++.+..   ......+.+.+++.||.+
T Consensus         6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~--gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   71 (151)
T 1p6t_A            6 KEIAMQVSGMTCAACAARIEKGLKRMP--GVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (151)
T ss_dssp             EEEEEEEESCCSSHHHHHHHHHHTTSS--SEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             eEEEEEECCCcCHHHHHHHHHHHhcCC--CeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence            45679999 999999999999999999  999999999999988862   257788999999999964

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.71  E-value=4.5e-08  Score=65.69  Aligned_cols=63  Identities=25%  Similarity=0.415  Sum_probs=54.5

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEe---cCCHHHHHHHHHhc---CCce
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKS---TLDPDVLLEAIKKS---GKTC   99 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~---~~~~~~i~~~i~~~---G~~~   99 (106)
                      +.++.|.|. |+|.+|+.+|+++|.+++  ||..+.+++..+++.|..   ...++.|.++|+.+   ||.+
T Consensus        19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~--GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v   88 (202)
T 2rop_A           19 VVTLQLRIDGMHCKSCVLNIEENIGQLL--GVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKV   88 (202)
T ss_dssp             -CEEEEEEESGGGSTHHHHHHHHTTSBT--TEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEE
T ss_pred             cEEEEEEECCeEcHHHHHHHHHHHhcCC--CeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEE
Confidence            345789999 999999999999999999  999999999999999873   25788999999988   3654

>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A

Probab=86.93  E-value=2.8  Score=23.72  Aligned_cols=54  Identities=11%  Similarity=0.129  Sum_probs=40.7

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEee
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      .++... +.|+.-..++.++|..++           ....+.|.  .......|...++..||.+...
T Consensus        11 ~~lD~rGl~CP~Pvl~~kkal~~l~-----------~G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~   67 (82)
T 3lvj_C           11 HTLDALGLRCPEPVMMVRKTVRNMQ-----------PGETLLIIADDPATTRDIPGFCTFMEHELVAK   67 (82)
T ss_dssp             EEEECTTCCTTHHHHHHHHHHHTSC-----------TTCEEEEEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred             EEEECCCCCCCHHHHHHHHHHHhCC-----------CCCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence            567777 999999999999999986           23344444  3345678888889999987654

>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1

Probab=86.88  E-value=3.4  Score=24.61  Aligned_cols=65  Identities=22%  Similarity=0.230  Sum_probs=44.7

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEE-----EcCCCeEEEE--e-cCCHHHHHHHHHhcCCceEee
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVEC-----SLPDQTVKVK--S-TLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v-----~~~~~~v~V~--~-~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      .+++.|.|- .+-+. .-.+-+.|..++  ||..+++     |..+..+.|+  + .++.++|.++|++.|-.++.+
T Consensus         6 irRlVLDVlKPh~p~-i~d~A~~l~~~~--gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSI   79 (97)
T 2raq_A            6 LIRIVLDILKPHEPI-IPEYAKYLSELR--GVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSV   79 (97)
T ss_dssp             EEEEEEEEECCSCSC-HHHHHHHHHHST--TCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEE
T ss_pred             ceEEEEEecCCCCCC-HHHHHHHHHhCC--CcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence            355667776 54333 456677788898  9887764     4444444444  4 489999999999999876643

>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1

Probab=85.43  E-value=4.2  Score=24.30  Aligned_cols=64  Identities=16%  Similarity=0.208  Sum_probs=44.5

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEc-----CCCeEEEE--e-cCCHHHHHHHHHhcCCceEe
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSL-----PDQTVKVK--S-TLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~-----~~~~v~V~--~-~~~~~~i~~~i~~~G~~~~~  101 (106)
                      .+++.|.|- .+-+. .-.+-+.|..++  ||..+++..     .+..+.|+  + .++.++|.++|++.|-.++.
T Consensus         6 iRRlVLDVlKPh~P~-ivdlA~~l~~~~--gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHS   78 (100)
T 3bpd_A            6 LRRLVLDVLKPHEPK-TIVFALKLSELE--NVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHS   78 (100)
T ss_dssp             EEEEEEEEEEESCSC-HHHHHHHHHTST--TEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEE
T ss_pred             ceEEEEEecCCCCCC-HHHHHHHHHhCC--CcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEe
Confidence            356677776 54333 556778899999  998877543     33444333  4 48999999999999986654

>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3

Probab=84.60  E-value=4.1  Score=24.02  Aligned_cols=55  Identities=22%  Similarity=0.320  Sum_probs=41.6

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEeec
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      .++... +.|+.-..++.++|..++           ..+.+.|.  .....+.|.+.++..||.+...+
T Consensus        27 ~~LD~rGl~CP~Pvl~tkkaL~~l~-----------~Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e   84 (98)
T 1jdq_A           27 KTLDVRGEVCPVPDVETKRALQNMK-----------PGEILEVWIDYPMSKERIPETVKKLGHEVLEIE   84 (98)
T ss_dssp             EEEECSSCCSSHHHHHHHHHHHTCC-----------TTCEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred             EEEeCCCCCCCHHHHHHHHHHHhCC-----------CCCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence            557777 999999999999999986           23344444  23456888889999999876543

>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}

Probab=83.73  E-value=5  Score=23.81  Aligned_cols=64  Identities=16%  Similarity=0.244  Sum_probs=44.0

Q ss_pred             eEEEEEEe-e-echhHHHHHHHHHhcCCCCCceEEEEEc-----CCCeEEE--Ee-cCCHHHHHHHHHhcCCceEee
Q psy7515          36 KVHVFKAE-M-TCDGCSSAITRILDRMKDKGVESVECSL-----PDQTVKV--KS-TLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        36 ~~~~l~v~-m-~C~~C~~~I~~~L~~~~~~Gv~~v~v~~-----~~~~v~V--~~-~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      +++.|.|- . +-+. .-.+-+.|..++  ||..+++..     .+..+.|  .+ .++.++|.++|++.|-.++.+
T Consensus         5 rRlVLDVlKP~h~P~-ivd~A~~l~~~~--gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSI   78 (96)
T 2x3d_A            5 RRLVLDVLKPIRGTS-IVDLAERISKLD--GVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSI   78 (96)
T ss_dssp             EEEEEEEEEESSSSC-HHHHHHHHHTST--TEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEE
T ss_pred             EEEEEEcccCCCCCC-HHHHHHHHHhCC--CcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEee
Confidence            45666665 4 4444 456778889999  998877543     3333333  34 489999999999999876543

>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*

Probab=82.48  E-value=2.1  Score=25.30  Aligned_cols=36  Identities=31%  Similarity=0.526  Sum_probs=26.5

Q ss_pred             EEEEEEeeechhH------HHHHHHHHhcCCCCCceEEEEEcCC
Q psy7515          37 VHVFKAEMTCDGC------SSAITRILDRMKDKGVESVECSLPD   74 (106)
Q Consensus        37 ~~~l~v~m~C~~C------~~~I~~~L~~~~~~Gv~~v~v~~~~   74 (106)
                      .+.+.+.+++++|      ...|+.+|..++  ||..+.+++..
T Consensus        42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~--gv~~V~V~l~~   83 (103)
T 3cq1_A           42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLP--GVEEVEVEVTF   83 (103)
T ss_dssp             EEEEEECCSSSSCCSSCHHHHHHHHHHHTST--TCCEEEEEECC
T ss_pred             EEEEEEEECCCCCcHHHHHHHHHHHHHHhCC--CceeEEEEEec
Confidence            3445555667776      567899999999  99998887543

>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A

Probab=81.64  E-value=4  Score=23.94  Aligned_cols=65  Identities=22%  Similarity=0.157  Sum_probs=36.2

Q ss_pred             hhhhhhhcC--CCCCCCCCCCCCCCCCCcc--eEEEEEEeeechhH------HHHHHHHHhcCCCCCceEEEEEcCC
Q psy7515           8 QWDNYLKAR--PGASKSPEGTGLDNEPTMA--KVHVFKAEMTCDGC------SSAITRILDRMKDKGVESVECSLPD   74 (106)
Q Consensus         8 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~l~v~m~C~~C------~~~I~~~L~~~~~~Gv~~v~v~~~~   74 (106)
                      +..+.|..-  |....+..+.+.-..-...  ..+.+.+.+++++|      ...|+.+|..++  ||..+.+++..
T Consensus        10 ~V~~aL~~V~DPel~~~iv~lG~V~~v~v~~~~~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~--gv~~v~V~l~~   84 (103)
T 1uwd_A           10 DVLNALKNVIDFELGLDVVSLGLVYDIQIDDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIE--GVNNVEVELTF   84 (103)
T ss_dssp             HHHHHHTTCBCTTTSSBTTTTTCCCCEEECTTCEEEEEECCSSSCCSSHHHHHHHHHHHHHTSS--SCCEEEEEECC
T ss_pred             HHHHHHcCCCCCCCCcChhhcCCeeEEEEcCCCEEEEEEEECCCCCcHHHHHHHHHHHHHHhCC--CcceEEEEEec
Confidence            334444433  4344444444443322111  24555555555555      456788899999  99988887543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	106
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	8e-16
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	5e-15
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	2e-13
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	7e-10
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	2e-09
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	4e-09
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	5e-09
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	1e-08
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	1e-08
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	2e-08
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	2e-08
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	2e-08
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	1e-07
d1q8la_	84	d.58.17.1 (A:) Menkes copper-transporting ATPase {	5e-06

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.0 bits (156), Expect = 8e-16
 Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 36 KVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKS 95
          K + F   MTC GCS A+ ++L ++ +  V  ++ SL  Q V V +TL  D +LE IKK+
Sbjct: 4  KHYQFNVVMTCSGCSGAVNKVLTKL-EPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKT 62

Query: 96 GKT 98
          GK 
Sbjct: 63 GKE 65

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 61.8 bits (150), Expect = 5e-15
 Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 38  HVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGK 97
           H F  +MTC GC+ A++R+L+++        +  LP++ V ++S    D LL  +KK+GK
Sbjct: 3   HEFSVDMTCGGCAEAVSRVLNKLG---GVKYDIDLPNKKVCIESEHSMDTLLATLKKTGK 59

Query: 98  TCSYIG 103
           T SY+G
Sbjct: 60  TVSYLG 65

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.9 bits (140), Expect = 2e-13
 Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 39  VFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKT 98
            +   M C+ C + I   L  +    + S+   +  Q + V+S++ P  ++  ++  GK 
Sbjct: 9   TYAIPMHCENCVNDIKACLKNVPG--INSLNFDIEQQIMSVESSVAPSTIINTLRNCGKD 66

Query: 99  CSYIG 103
               G
Sbjct: 67  AIIRG 71

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 49.0 bits (117), Expect = 7e-10
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 35  AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEA 91
           A+  +     MTC  C++ I   L     KGV   + SL     +V   + +  D + E 
Sbjct: 1   AREVILAVHGMTCSACTNTINTQL--RALKGVTKCDISLVTNECQVTYDNEVTADSIKEI 58

Query: 92  IKKSGKTCSYIGE 104
           I+  G  C  + +
Sbjct: 59  IEDCGFDCEILRD 71

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 47.6 bits (113), Expect = 2e-09
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKT 98
          + C+ C+ A+T+ +         +V+  L  + V + S L  + L  AI  +G  
Sbjct: 10 IACEACAEAVTKAVQNED--AQATVQVDLTSKKVTITSALGEEQLRTAIASAGHE 62

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 47.0 bits (112), Expect = 4e-09
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C   + + +   K +GV  V+ +   +   V    +      L +A   +G
Sbjct: 12 MTCSACPITVKKAI--SKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAG 65

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (111), Expect = 5e-09
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 6/71 (8%)

Query: 34  MAKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLL 89
           + +  V   + MTC+ C  +I  ++   K  GV+S+  SL +    V+       P+ L 
Sbjct: 1   LTQETVINIDGMTCNSCVQSIEGVI--SKKPGVKSIRVSLANSNGTVEYDPLLTSPETLR 58

Query: 90  EAIKKSGKTCS 100
            AI+  G   +
Sbjct: 59  GAIEDMGFDAT 69

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (109), Expect = 1e-08
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 28 LDNEPTMAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLD 84
          +D    +  V +    MTC+ C   I + +   K  GV  ++ SL ++   +        
Sbjct: 1  MDPSMGVNSVTISVEGMTCNSCVWTIEQQI--GKVNGVHHIKVSLEEKNATIIYDPKLQT 58

Query: 85 PDVLLEAIKKSG 96
          P  L EAI   G
Sbjct: 59 PKTLQEAIDDMG 70

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 45.9 bits (109), Expect = 1e-08
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSG 96
          MTC  C++ I + L   +  GV     +L  +TV V    +      + E I+K G
Sbjct: 15 MTCAACAARIEKGL--KRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLG 68

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 45.2 bits (107), Expect = 2e-08
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 44  MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCS 100
           M+C+ C + I   +   +  GV+ V+  L  +   VK   + +    + +AI + G    
Sbjct: 9   MSCNHCVARIEEAV--GRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAE 66

Query: 101 YI 102
            I
Sbjct: 67  VI 68

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 45.2 bits (107), Expect = 2e-08
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 5/70 (7%)

Query: 34  MAKVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLE 90
           M +  +    M+C  C  A+   +   +  GV +V  +L    V V      +    + +
Sbjct: 1   MEQKTLQVEGMSCQHCVKAVETSV--GELDGVSAVHVNLEAGKVDVSFDADKVSVKDIAD 58

Query: 91  AIKKSGKTCS 100
           AI+  G   +
Sbjct: 59  AIEDQGYDVA 68

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 45.3 bits (107), Expect = 2e-08
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 5/64 (7%)

Query: 44  MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCS 100
           MTC  C++ I + L   K +GV +   +   +TV V+          L EA+ K G    
Sbjct: 11  MTCAACANRIEKRL--NKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLK 68

Query: 101 YIGE 104
             GE
Sbjct: 69  LKGE 72

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 43.3 bits (102), Expect = 1e-07
 Identities = 10/54 (18%), Positives = 21/54 (38%), Gaps = 3/54 (5%)

Query: 44 MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK-STLDPDVLLEAIKKSG 96
          M C  C+  +   +   +  GV  V+     + + V         +  A++K+G
Sbjct: 12 MDCAACARKVENAV--RQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAG 63

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 5e-06
 Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 5/64 (7%)

Query: 44  MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKV---KSTLDPDVLLEAIKKSGKTCS 100
           MTC  C+S I   +   K +GV+ ++ SL +Q   +      +  + + + I+  G    
Sbjct: 18  MTCHSCTSTIEGKI--GKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAF 75

Query: 101 YIGE 104
              +
Sbjct: 76  VKKQ 79

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	106
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.72
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.72
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.7
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.65
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.64
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.63
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.63
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.62
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.62
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.61
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.58
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.57
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.56
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.56
d1dcja_	81	SirA {Escherichia coli [TaxId: 562]}	91.85
d1jdqa_	98	Hypothetical protein TM0983 {Thermotoga maritima [	87.16
d3bpda1	91	Uncharacterized protein AF1549 {Archaeoglobus fulg	86.43
d2raqa1	93	Uncharacterized protein MTH889 {Methanobacterium t	85.36
d1je3a_	97	hypothetical protein YedF (EC005) {Escherichia col	83.49
d1uwda_	102	Hypothetical protein TM0487 {Thermotoga maritima [	81.57
d2cu6a1	91	Hypothetical protein TTHB138 {Thermus thermophilus	81.18

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.72  E-value=1.9e-17  Score=93.66  Aligned_cols=64  Identities=42%  Similarity=0.838  Sum_probs=60.8

Q ss_pred             EEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeec
Q psy7515          37 VHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        37 ~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      +++|+|+|+|.+|+.+|+++|++++  |+ ++.+|+.+++++|.++.+++.|+++|+++||++.+++
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~--gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLG--GV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHC--SE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCC--Cc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            4789999999999999999999999  98 6999999999999999999999999999999999876

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=2.5e-17  Score=94.58  Aligned_cols=67  Identities=21%  Similarity=0.509  Sum_probs=62.9

Q ss_pred             eEEEEEEeeechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEeecC
Q psy7515          36 KVHVFKAEMTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        36 ~~~~l~v~m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      .+.+|.|+|+|.+|+.+|+++|.+++  ||..+.+|+.+++++|.+..++++|+++|+++||++.+.++
T Consensus         6 ~~~~f~V~M~C~~C~~~Iek~l~~~~--gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~g~   72 (72)
T d1qupa2           6 YEATYAIPMHCENCVNDIKACLKNVP--GINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA   72 (72)
T ss_dssp             EEEEEECCCCSTTHHHHHHHHHTTCT--TEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECC
T ss_pred             EEEEEEEccCCHHHHHHHHHHHhcCC--CeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEecC
Confidence            34779999999999999999999999  99999999999999999999999999999999999998764

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=7.7e-17  Score=92.50  Aligned_cols=65  Identities=40%  Similarity=0.630  Sum_probs=61.3

Q ss_pred             ceEEEEEEeeechhHHHHHHHHHhcC-CCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceEe
Q psy7515          35 AKVHVFKAEMTCDGCSSAITRILDRM-KDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        35 ~~~~~l~v~m~C~~C~~~I~~~L~~~-~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~  101 (106)
                      +++++|.|+|+|.+|+.+|+++|.++ +  ||.++.+|+.+++++|.+.++++.|.++|+++||.+..
T Consensus         3 ~kt~~f~V~MtC~~C~~~Ie~~L~~l~~--gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~~   68 (72)
T d1cc8a_           3 IKHYQFNVVMTCSGCSGAVNKVLTKLEP--DVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRS   68 (72)
T ss_dssp             CEEEEEEECCCSHHHHHHHHHHHHTTTT--SEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEE
T ss_pred             cEEEEEEECcCcHHHHHHHHHHHHcCcC--ceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccCC
Confidence            56789999999999999999999998 7  89999999999999999999999999999999999874

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=5e-16  Score=88.87  Aligned_cols=66  Identities=26%  Similarity=0.479  Sum_probs=60.5

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCceEee
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      .++..|+|+ |+|++|+.+|+++|.+++  ||.++.+|+.++++.|.   ..++++.|.++|+++||++.+.
T Consensus         2 t~~~~l~V~GM~C~~C~~~Ie~~l~~~~--GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           2 TQETVINIDGMTCNSCVQSIEGVISKKP--GVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTST--TCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             cEEEEEEECCcccHHHHHHHHHHHhcCC--CcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            456889999 999999999999999999  99999999999999997   3378999999999999998764

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=3.1e-16  Score=89.84  Aligned_cols=66  Identities=26%  Similarity=0.520  Sum_probs=61.1

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEeec
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      +++.|.|+ |+|++|+.+|+++|.+++  ||.++.+|+..+++.|.  +..++++|.++|+++||++.+++
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~--gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALK--GVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTST--TEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCC--CceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEcc
Confidence            45889999 999999999999999999  99999999999999988  45789999999999999998765

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.7e-15  Score=88.14  Aligned_cols=69  Identities=23%  Similarity=0.400  Sum_probs=63.3

Q ss_pred             cceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCceEeecC
Q psy7515          34 MAKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        34 ~~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      .+.+++|.|+ |+|++|+..|+++|++++  ||..+++|+.++++.|.   ..+++++|.++|+++||++.+..+
T Consensus         6 ~~~~~~l~V~gm~C~~C~~~ie~~l~~~~--gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~~   78 (79)
T d1kvja_           6 GVNSVTISVEGMTCNSCVWTIEQQIGKVN--GVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHNP   78 (79)
T ss_dssp             TCEEEEEEEESCCSTHHHHHHHHHHHTTT--TCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSC
T ss_pred             CceEEEEEECCeecHHHHHHHHHHHhcCC--CceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCCC
Confidence            3577999999 999999999999999999  99999999999999998   337999999999999999987664

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.63  E-value=1.4e-15  Score=86.33  Aligned_cols=64  Identities=22%  Similarity=0.448  Sum_probs=58.6

Q ss_pred             ceEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCceE
Q psy7515          35 AKVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCS  100 (106)
Q Consensus        35 ~~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~~  100 (106)
                      |.+.+|.|+ |+|++|+.+|+++|++++  ||.++.+|+..+++.|.   ..++.++|.+.|+++||++.
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~--GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~~   68 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELD--GVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDVA   68 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTST--TEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEEC
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCC--CceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCccc
Confidence            456889999 999999999999999999  99999999999999998   33789999999999999863

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.62  E-value=1.2e-15  Score=86.47  Aligned_cols=62  Identities=26%  Similarity=0.513  Sum_probs=57.6

Q ss_pred             EEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCceEee
Q psy7515          39 VFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        39 ~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      +|.|+ |+|.+|+.+|+++|.+++  ||.++.+|+.+++++|.   ..+++++|.++|+++||++.++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~--GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRIS--GVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTST--TEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCC--CcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            58999 999999999999999999  99999999999999998   3378999999999999998764

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.62  E-value=2.6e-16  Score=88.23  Aligned_cols=61  Identities=21%  Similarity=0.454  Sum_probs=58.3

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEecCCHHHHHHHHHhcCCceE
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKSTLDPDVLLEAIKKSGKTCS  100 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~  100 (106)
                      ++|.|+ |+|++|+.+|+++|++++  ||.++.+|+.++++.|.+.+++++|.++|.++||+++
T Consensus         3 ~~l~V~gM~C~~C~~~Ie~~l~~~~--gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           3 IQLTVPTIACEACAEAVTKAVQNED--AQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEECTTTTSSSCTHHHHHHHHHHC--TTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             EEEEECCccchhHHHHHHHHHhcCC--CeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            679999 999999999999999999  9999999999999999988999999999999999863

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.61  E-value=1.7e-15  Score=86.63  Aligned_cols=65  Identities=18%  Similarity=0.392  Sum_probs=60.0

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCceEee
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      +++.|.|+ |+|++|+.+|+++|..++  ||..+.+|+..+++.|.   ..+++++|.+.|+++||++.+.
T Consensus         3 qt~~l~V~Gm~C~~C~~~Ie~~l~~~~--gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           3 QTVTLSVPGMTCSACPITVKKAISKVE--GVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTST--TEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCC--CcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            46889999 999999999999999999  99999999999999988   3478999999999999998864

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.58  E-value=5.8e-15  Score=84.30  Aligned_cols=62  Identities=31%  Similarity=0.485  Sum_probs=57.9

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCce
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTC   99 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~   99 (106)
                      ++++|.|+ |+|++|+.+|+++|.+++  ||.++.+|+..+++.|.   +..+.++|.++|+++||++
T Consensus         6 ~~~~l~V~Gm~C~~C~~~Ie~~l~~~~--gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           6 KEIAMQVSGMTCAACAARIEKGLKRMP--GVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             EEEEEEEESCCSSHHHHHHHHHHTTSS--SEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             eEEEEEECCeecHHHHHHHHHHHHcCC--CcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            56899999 999999999999999999  99999999999999997   3478999999999999985

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.57  E-value=5e-15  Score=86.06  Aligned_cols=67  Identities=30%  Similarity=0.480  Sum_probs=61.2

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCceEeecC
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      .++.|.|+ |+|++|+.+|+++|..++  ||.++.+|+.++++.|.   ..++.++|.++|+++||++.+.+.
T Consensus         2 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~--gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   72 (79)
T d1p6ta2           2 EKAEFDIEGMTCAACANRIEKRLNKIE--GVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE   72 (79)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSS--SEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCS
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCC--CcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCc
Confidence            35889999 999999999999999999  99999999999999998   347899999999999999987654

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=6.9e-15  Score=86.45  Aligned_cols=67  Identities=24%  Similarity=0.421  Sum_probs=61.3

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE---ecCCHHHHHHHHHhcCCceEeecC
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK---STLDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~---~~~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      .++.|.|+ |+|.+|+.+|+++|.+++  ||.++.+|+.++++.|.   ..++.+.|.++|+++||++.+.+.
T Consensus         9 ~~v~l~V~GMtC~~C~~~Ie~~l~~~~--GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~   79 (84)
T d1q8la_           9 VVLKMKVEGMTCHSCTSTIEGKIGKLQ--GVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             EEEEEEECCTTTCSSCHHHHHHHHTCT--TEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             EEEEEEECCeEcHHHHHHHHHHHhcCC--CceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCC
Confidence            45889999 999999999999999999  99999999999999998   347899999999999999887653

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=6.9e-15  Score=84.26  Aligned_cols=66  Identities=17%  Similarity=0.298  Sum_probs=59.5

Q ss_pred             EEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEEec-CCHHHHHHHHHhcCCceEeecC
Q psy7515          37 VHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVKST-LDPDVLLEAIKKSGKTCSYIGE  104 (106)
Q Consensus        37 ~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~~~-~~~~~i~~~i~~~G~~~~~~~~  104 (106)
                      +++|.|+ |+|++|+.+|+++|.+++  ||..+.+|+.+++++|... ...++|.++|.++||.+....+
T Consensus         4 k~~~~V~Gm~C~~C~~~Ie~~l~~~~--gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~~~~   71 (73)
T d1mwza_           4 RYSWKVSGMDCAACARKVENAVRQLA--GVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDEQA   71 (73)
T ss_dssp             CEEEECTTCCSHHHHHHHHHHHHTSS--SEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCBCCS
T ss_pred             EEEEEECCcCCHHHHHHHHHHHhcCC--CceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccCCCC
Confidence            4889999 999999999999999999  9999999999999999843 4578999999999999876543

>d1dcja_ d.68.3.3 (A:) SirA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: SirA
species: Escherichia coli [TaxId: 562]

Probab=91.85  E-value=0.28  Score=26.56  Aligned_cols=55  Identities=11%  Similarity=0.122  Sum_probs=42.3

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEeec
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSYIG  103 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~~~  103 (106)
                      .++.+. +.|+....++.++|.+++           ....+.|.  .......|...++..||.+...+
T Consensus        10 ~~lD~~G~~CP~P~l~~k~al~~~~-----------~G~~l~v~~dd~~a~~di~~~~~~~g~~~~~~~   67 (81)
T d1dcja_          10 HTLDALGLRCPEPVMMVRKTVRNMQ-----------PGETLLIIADDPATTRDIPGFCTFMEHELVAKE   67 (81)
T ss_dssp             EEECCTTCCTTHHHHHHHHHHHHCC-----------TTCCEEEEECSTTHHHHHHHHHHHTTCEEEEEE
T ss_pred             eEEECCCCCCCHHHHHHHHHHHhCC-----------CCCEEEEEeCCCcHHHHHHHHHHHcCCEEEEEE
Confidence            667777 999999999999999997           23344554  33567788888999999875443

>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: Hypothetical protein TM0983
species: Thermotoga maritima [TaxId: 2336]

Probab=87.16  E-value=1.2  Score=24.92  Aligned_cols=52  Identities=21%  Similarity=0.335  Sum_probs=40.2

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceE
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCS  100 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~  100 (106)
                      .++.+. ..|+.....+.++|..++           ..+.+.|.  .....+.|...+...||.+.
T Consensus        27 ~~LD~rG~~CP~Pll~~kkal~~l~-----------~Ge~L~V~~dd~~a~~dI~~~~~~~g~~i~   81 (98)
T d1jdqa_          27 KTLDVRGEVCPVPDVETKRALQNMK-----------PGEILEVWIDYPMSKERIPETVKKLGHEVL   81 (98)
T ss_dssp             EEEECSSCCSSHHHHHHHHHHHTCC-----------TTCEEEEEESSCTHHHHHHHHHHHSSCCEE
T ss_pred             eeEECCCCcCCHHHHHHHHHHHcCC-----------CCCEEEEEeCCcchHHHHHHHHHHcCCEEE
Confidence            467777 899999999999999997           23344444  33567788999999999874

>d3bpda1 d.58.61.1 (A:1-91) Uncharacterized protein AF1549 {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein AF1549
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.43  E-value=1.6  Score=24.28  Aligned_cols=63  Identities=14%  Similarity=0.177  Sum_probs=45.1

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEE-----cCCCeEEEE--e-cCCHHHHHHHHHhcCCceEe
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVECS-----LPDQTVKVK--S-TLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~-----~~~~~v~V~--~-~~~~~~i~~~i~~~G~~~~~  101 (106)
                      +++.|.|. .+-+.-. .+...|..++  ||..+++.     ..+..+.++  + .++.++|.++|++.|-.++.
T Consensus         5 rRlVLDVlKPh~p~~~-~~A~~l~~~~--gV~~VnitV~EiD~~t~~i~ItiEG~~idyd~i~~~IE~~Gg~IHS   76 (91)
T d3bpda1           5 RRLVLDVLKPHEPKTI-VFALKLSELE--NVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHS   76 (91)
T ss_dssp             EEEEEEEEEESCSCHH-HHHHHHHTST--TEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEE
T ss_pred             eEEEEEeecCCCCCHH-HHHHHHhccC--CcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEE
Confidence            56778887 6665443 4788899999  99887743     333344333  4 48999999999999987654

>d2raqa1 d.58.61.1 (A:3-95) Uncharacterized protein MTH889 {Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: MTH889-like
family: MTH889-like
domain: Uncharacterized protein MTH889
species: Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=85.36  E-value=1.9  Score=24.07  Aligned_cols=63  Identities=22%  Similarity=0.246  Sum_probs=45.7

Q ss_pred             eEEEEEEe-eechhHHHHHHHHHhcCCCCCceEEEE-----EcCCCeEEEE--e-cCCHHHHHHHHHhcCCceEe
Q psy7515          36 KVHVFKAE-MTCDGCSSAITRILDRMKDKGVESVEC-----SLPDQTVKVK--S-TLDPDVLLEAIKKSGKTCSY  101 (106)
Q Consensus        36 ~~~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v-----~~~~~~v~V~--~-~~~~~~i~~~i~~~G~~~~~  101 (106)
                      +++.|.|. .+-+ -.-.+...|.+++  ||..+++     |..+..+.|+  + .++.++|.++|++.|-.++.
T Consensus         5 RRlVLDVlKPh~P-~i~e~A~~l~~~~--gV~~VnitV~EiD~et~~i~itiEG~~idyd~i~~~IE~~Gg~IHS   76 (93)
T d2raqa1           5 IRIVLDILKPHEP-IIPEYAKYLSELR--GVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHS   76 (93)
T ss_dssp             EEEEEEEECCSCS-CHHHHHHHHHHST--TCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEE
T ss_pred             EEEEEEeecCCCC-CHHHHHHHHhccC--CcceEEEEEEEecccceEEEEEEEecCCCHHHHHHHHHHcCCeEEE
Confidence            56777777 6555 4567788899999  9887764     4444444444  4 48999999999999987654

>d1je3a_ d.68.3.3 (A:) hypothetical protein YedF (EC005) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: hypothetical protein YedF (EC005)
species: Escherichia coli [TaxId: 562]

Probab=83.49  E-value=0.45  Score=26.79  Aligned_cols=54  Identities=13%  Similarity=0.095  Sum_probs=40.5

Q ss_pred             EEEEEe-eechhHHHHHHHHHhcCCCCCceEEEEEcCCCeEEEE--ecCCHHHHHHHHHhcCCceEee
Q psy7515          38 HVFKAE-MTCDGCSSAITRILDRMKDKGVESVECSLPDQTVKVK--STLDPDVLLEAIKKSGKTCSYI  102 (106)
Q Consensus        38 ~~l~v~-m~C~~C~~~I~~~L~~~~~~Gv~~v~v~~~~~~v~V~--~~~~~~~i~~~i~~~G~~~~~~  102 (106)
                      +++.+. +.|+....++.++|.+++           ..+.+.|.  .......|...++..||.+...
T Consensus        28 ~~LD~~G~~CP~Pll~~k~~l~~l~-----------~Ge~L~V~~dd~~a~~di~~~~~~~g~~v~~~   84 (97)
T d1je3a_          28 YRLDMVGEPCPYPAVATLEAMPQLK-----------KGEILEVVSDCPQSINNIPLDARNHGYTVLDI   84 (97)
T ss_dssp             EEECSBCCSSSSSTHHHHHHTTTCC-----------SSCEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred             eEEeCCCCcCCHHHHHHHHHHHcCC-----------CCCEEEEEeCCccHHHHHHHHHHHcCCEEEEE
Confidence            456666 899999999999999987           23344444  3356678899999999988543

>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TM0487
species: Thermotoga maritima [TaxId: 2336]

Probab=81.57  E-value=1.4  Score=24.85  Aligned_cols=56  Identities=20%  Similarity=0.146  Sum_probs=34.5

Q ss_pred             CCCCCCCCCCCCCCCCC--cceEEEEEEeeechhH------HHHHHHHHhcCCCCCceEEEEEcCC
Q psy7515          17 PGASKSPEGTGLDNEPT--MAKVHVFKAEMTCDGC------SSAITRILDRMKDKGVESVECSLPD   74 (106)
Q Consensus        17 ~~~~~~~~~~~~~~~~~--~~~~~~l~v~m~C~~C------~~~I~~~L~~~~~~Gv~~v~v~~~~   74 (106)
                      |..+.+.-+.|.-....  ....+.+.+.+++++|      ...+++++.+++  ||.++.|++.-
T Consensus        20 Pe~~~dIV~LGlV~~i~I~~~g~V~v~~~lt~~~Cp~~~~i~~~i~~al~~~~--gV~~v~V~i~~   83 (102)
T d1uwda_          20 FELGLDVVSLGLVYDIQIDDQNNVKVLMTMTTPMCPLAGMILSDAEEAIKKIE--GVNNVEVELTF   83 (102)
T ss_dssp             TTTSSBTTTTTCCCCEEECTTCEEEEEECCSSSCCSSHHHHHHHHHHHHHTSS--SCCEEEEEECC
T ss_pred             CCCCcceeeccceeeEEeccccceEEEEecCCCCCchHHHHHHHHHHHHHcCC--CCceEEEEEEe
Confidence            55555655666544332  1123445554444444      567889999999  99999887643

>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TTHB138
species: Thermus thermophilus [TaxId: 274]

Probab=81.18  E-value=0.97  Score=24.93  Aligned_cols=34  Identities=32%  Similarity=0.620  Sum_probs=25.7

Q ss_pred             EEEEEeeechhH------HHHHHHHHhcCCCCCceEEEEEcC
Q psy7515          38 HVFKAEMTCDGC------SSAITRILDRMKDKGVESVECSLP   73 (106)
Q Consensus        38 ~~l~v~m~C~~C------~~~I~~~L~~~~~~Gv~~v~v~~~   73 (106)
                      +.+.+.++.++|      ...++.+|.+++  |+.++.|++.
T Consensus        38 v~v~l~lt~~~cp~~~~i~~~i~~al~~l~--gv~~V~V~~~   77 (91)
T d2cu6a1          38 AYVRMTLTTPGCPLHDSLGEAVRQALSRLP--GVEEVEVEVT   77 (91)
T ss_dssp             EEEEECCSSSSCCSSCHHHHHHHHHHHTST--TCCEEEEEEC
T ss_pred             cEEEEEcCCCCCcHHHHHHHHHHHHHHcCC--CCceEEEEEE
Confidence            455555555555      778899999999  9999888764