Psyllid ID: psy755

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK
Secondary Structure (PSIPRED)
ccHHHHHHHHHcccEEEEEcccHHHHHHHHHccccccccHHHHHccccEEEEEccccHHHHHHHccccccccccccccEEEEccccccHHHHHHHHHHHHcccccccccccccHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccEEEEEEccHHHHHHHHHccccccccHHHHHHcccEEEEEEcccccHHHHEccccccccccccccEEEEcccccHHHHHHHHHHHHHcccEEEEccccccHHHcccccEEEcccccHHHHHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGSHMARNLlknghdvivydkntdaSQTLAKEGANMALSLSTLASGAEFIISMLpasqdvldaydgsdgilkhakpgvividsstvdpqvpqtLSNLAREKQitfldapvsggtkAAQEATLTFMvggdkssleKAKPILKcmgrnivhcgdsgngqVAKLCNNMLLGVTMMGVAEAMNLGVK
Flexible Loop (DISEMBL)
MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFldapvsggtKAAQEATLTFmvggdksslEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK
Low Complexity Region (SEG)
MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK
Disordered region (IsUnstruct)
**************DVIVYD***************MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV**************KQITFLDAPV********EATLTFMVGG****LEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA******
Disordered Region (DISOPRED)
MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK
Disordered Region (DISEMBL)
MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK
Disordered Region (DISPRO)
*GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
Q54CX6	321	Probable 3-hydroxyisobuty	yes	N/A	1.0	0.570	0.508	4e-47
Q99L13	335	3-hydroxyisobutyrate dehy	yes	N/A	1.0	0.546	0.469	2e-45
P31937	336	3-hydroxyisobutyrate dehy	yes	N/A	1.0	0.544	0.475	2e-45
Q5R5E7	336	3-hydroxyisobutyrate dehy	yes	N/A	1.0	0.544	0.475	2e-45
Q2HJD7	336	3-hydroxyisobutyrate dehy	yes	N/A	1.0	0.544	0.469	5e-45
P29266	335	3-hydroxyisobutyrate dehy	yes	N/A	1.0	0.546	0.464	8e-45
P28811	298	3-hydroxyisobutyrate dehy	yes	N/A	1.0	0.614	0.497	8e-42
Q9XTI0	299	Probable 3-hydroxyisobuty	yes	N/A	0.994	0.608	0.469	8e-41
Q9V8M5	324	Probable 3-hydroxyisobuty	yes	N/A	0.978	0.552	0.464	4e-40
Q9SUC0	347	Probable 3-hydroxyisobuty	yes	N/A	0.983	0.518	0.412	7e-36

>sp|Q54CX6|3HIDH_DICDI Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=hibA PE=3 SV=1

 Score =  187 bits (474), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 93/183 (50%), Positives = 132/183 (72%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG H A NL+K GH++IV+D + D    L ++GA +A S + +A  A+ I++MLPAS  V
Sbjct: 33  MGGHQAINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVTMLPASAHV 92

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            + Y G +GI +  +PG +++DSST+DP   + ++++A++ Q T LD PVSGGT  A+  
Sbjct: 93  KNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSGGTGGAEAG 152

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG +     AK  L+CMG+NIVHCGD G GQVAK+CNN++LG++M+ V+EAMNL
Sbjct: 153 TLTFMVGGSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNL 212

Query: 181 GVK 183
           GVK
Sbjct: 213 GVK 215

Dictyostelium discoideum (taxid: 44689)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 1

>sp|Q99L13|3HIDH_MOUSE 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus GN=Hibadh PE=2 SV=1

 Score =  182 bits (461), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 86/183 (46%), Positives = 126/183 (68%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA+NL+K+G+ +I+YD   D  +   + G  +A S + +A  A+ II+MLP+S + 
Sbjct: 49  MGNPMAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIITMLPSSMNA 108

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           ++ Y G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct: 109 VEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 168

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            LTFMVGG +     A+ +L+CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct: 169 NLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNL 228

Query: 181 GVK 183
           G++
Sbjct: 229 GIR 231

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|P31937|3HIDH_HUMAN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=HIBADH PE=1 SV=2

 Score =  181 bits (460), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/183 (47%), Positives = 124/183 (67%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct: 50  MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINA 109

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct: 110 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct: 170 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 229

Query: 181 GVK 183
           G++
Sbjct: 230 GIR 232

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q5R5E7|3HIDH_PONAB 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii GN=HIBADH PE=2 SV=1

 Score =  181 bits (460), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/183 (47%), Positives = 124/183 (67%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct: 50  MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINA 109

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct: 110 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct: 170 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 229

Query: 181 GVK 183
           G++
Sbjct: 230 GIR 232

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q2HJD7|3HIDH_BOVIN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus GN=HIBADH PE=2 SV=1

 Score =  180 bits (456), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 86/183 (46%), Positives = 124/183 (67%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct: 50  MGNPMAKNLMKHGYPLIIYDVFPDACKEFLDAGEQVVSSPADVAEKADRIITMLPTSINA 109

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct: 110 IEAYSGANGILKKVKKGSLLIDSSTIDPMVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNN+LL ++M+G AEAMNL
Sbjct: 170 NLTFMVGGVEEEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNLLLAISMIGTAEAMNL 229

Query: 181 GVK 183
           G++
Sbjct: 230 GIR 232

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|P29266|3HIDH_RAT 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Hibadh PE=1 SV=3

 Score =  179 bits (454), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 85/183 (46%), Positives = 127/183 (69%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA+NL+K+G+ +I+YD   D  +   + G  +A S + +A  A+ II+MLP+S + 
Sbjct: 49  MGNPMAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIITMLPSSMNS 108

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           ++ Y G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct: 109 IEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 168

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            LTFMVGG ++    A+ +L CMG N+++CG  G+GQ AK+CNNMLL ++M+G AEAMNL
Sbjct: 169 NLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNL 228

Query: 181 GVK 183
           G++
Sbjct: 229 GIR 231

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|P28811|MMSB_PSEAE 3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=mmsB PE=2 SV=1

 Score =  169 bits (428), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/183 (49%), Positives = 114/183 (62%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MA NLLK GH V V+D    A   L ++GA  A S      GAE +ISMLPA Q V
Sbjct: 12  MGGPMAANLLKAGHRVNVFDLQPKAVLGLVEQGAQGADSALQCCEGAEVVISMLPAGQHV 71

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
              Y G DG+L       ++ID ST+ P+  + ++  A  K +T LDAPVSGG   A+  
Sbjct: 72  ESLYLGDDGLLARVAGKPLLIDCSTIAPETARKVAEAAAAKGLTLLDAPVSGGVGGARAG 131

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL+F+VGG      +A+P+L+ MGRNI H GD G GQVAK+CNNMLLG+ M G AEA+ L
Sbjct: 132 TLSFIVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEALAL 191

Query: 181 GVK 183
           GVK
Sbjct: 192 GVK 194

Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q9XTI0|3HIDH_CAEEL Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=B0250.5 PE=3 SV=1

 Score =  166 bits (420), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 86/183 (46%), Positives = 121/183 (66%), Gaps = 1/183 (0%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG HMARNL+KNG  +IVYD N    Q    EG  +A   + +A+ ++ II++LP+S  V
Sbjct: 12  MGGHMARNLIKNGKKLIVYDVNKAVVQEFKAEGCEVAAHPADIAAASKEIITVLPSSPHV 71

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
              Y G  GI K  +PG + +DSST+D  V   ++  A   +  ++DAP+SGG   AQ+A
Sbjct: 72  KAVYQGEAGIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGVTGAQQA 131

Query: 121 TLTFMVG-GDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMN 179
           TLTFMVG G+ ++ ++A+ +L  MG+NIV+ G  GNG  AK+CNNMLLG+ M+ VAE MN
Sbjct: 132 TLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAETMN 191

Query: 180 LGV 182
           LG+
Sbjct: 192 LGI 194

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q9V8M5|3HIDH_DROME Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Drosophila melanogaster GN=CG15093 PE=2 SV=2

 Score =  164 bits (414), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 86/185 (46%), Positives = 120/185 (64%), Gaps = 6/185 (3%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG++MA NL+K GH + V+D +  A   LA +GA +    S LA  ++F+I+MLP +  V
Sbjct: 39  MGANMASNLIKAGHKLHVFDISKPACDGLAAKGATVYAKTSELAKNSDFVITMLPNNAIV 98

Query: 61  LDAYD--GSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQ 118
             +YD   +DG+ K      I IDSST+ P + ++L      K   F+DAPVSGG   A+
Sbjct: 99  DASYDEMTADGVNKD----TIFIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAE 154

Query: 119 EATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAM 178
           +ATLTFMVGG ++     K +L+CMG+ I HCG  G GQ AKLCNNM+L ++M+GV+EAM
Sbjct: 155 QATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAM 214

Query: 179 NLGVK 183
           NL V+
Sbjct: 215 NLAVR 219

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q9SUC0|3HIDH_ARATH Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3

 Score =  149 bits (377), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 80/194 (41%), Positives = 119/194 (61%), Gaps = 14/194 (7%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  M  NL++ G+ V V+D N D  +   + G +   +   +A  +E +I+MLP+S  V
Sbjct: 48  MGFRMVNNLIRAGYKVTVHDINRDVMKMFTEMGVSSRETPYEVAQDSEVVITMLPSSSHV 107

Query: 61  LDAYDGSDGIL---KHAKPGVIVIDSSTVDPQVPQTLS------NLAREK----QITFLD 107
           +D Y G++G+L      +P  + IDSST+DPQ  + +S      NL  ++    +   LD
Sbjct: 108 MDVYTGTNGLLLGENDIRPA-LFIDSSTIDPQTTRKISLAVSNCNLKEKRDNWEKPVMLD 166

Query: 108 APVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLL 167
           APVSGG  AA+  TLTFMVGG + +   A+PIL+ MGR  ++CG SGNG  AK+CNN+ +
Sbjct: 167 APVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAM 226

Query: 168 GVTMMGVAEAMNLG 181
            V+M+G +EA+ LG
Sbjct: 227 AVSMLGTSEALALG 240

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
380023660	311	PREDICTED: 3-hydroxyisobutyrate dehydrog	1.0	0.588	0.551	3e-51
332022578	324	3-hydroxyisobutyrate dehydrogenase, mito	1.0	0.564	0.540	5e-50
307205358	295	3-hydroxyisobutyrate dehydrogenase, mito	1.0	0.620	0.524	3e-49
307186775	285	3-hydroxyisobutyrate dehydrogenase, mito	1.0	0.642	0.524	7e-49
340709790	318	PREDICTED: 3-hydroxyisobutyrate dehydrog	1.0	0.575	0.524	2e-48
350407062	318	PREDICTED: 3-hydroxyisobutyrate dehydrog	1.0	0.575	0.524	3e-48
330844093	318	3-hydroxyisobutyrate dehydrogenase [Dict	1.0	0.575	0.535	5e-48
383859099	316	PREDICTED: 3-hydroxyisobutyrate dehydrog	1.0	0.579	0.530	5e-48
242004397	310	3-hydroxyisobutyrate dehydrogenase, puta	0.989	0.583	0.524	7e-48
443702325	335	hypothetical protein CAPTEDRAFT_150998 [	0.994	0.543	0.516	9e-48

>gi|380023660|ref|XP_003695633.1| PREDICTED: 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like [Apis florea]

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 101/183 (55%), Positives = 129/183 (70%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGSHMARN+LK G+ +IV+D N  A   L   GA+ A S + +A   E ++SMLP++Q V
Sbjct: 29  MGSHMARNILKKGYKLIVFDVNESAMSNLTDIGADRASSPAEMAKDVEVVVSMLPSNQHV 88

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           LD Y+  +G+L  AK   I+IDSST+DP V QTL+  A++  + FLD+PVSGG  AA+  
Sbjct: 89  LDVYNLKNGLLSSAKRNSILIDSSTIDPFVSQTLAKEAKKLNLNFLDSPVSGGINAAKNG 148

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG K + E  K +L CMG  I+HCGD G GQ AKLCNNMLLG++M+G AEA NL
Sbjct: 149 TLTFMVGGSKENFELVKTLLNCMGSRIIHCGDVGMGQAAKLCNNMLLGISMIGTAEAFNL 208

Query: 181 GVK 183
           G K
Sbjct: 209 GQK 211

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022578|gb|EGI62880.1| 3-hydroxyisobutyrate dehydrogenase, mitochondrial [Acromyrmex echinatior]

 Score =  202 bits (514), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 99/183 (54%), Positives = 131/183 (71%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGSHMA+NLLK  + +IVYD N  A   L + GA+ AL+++ ++  A+ IISMLP++Q V
Sbjct: 26  MGSHMAKNLLKKDYKLIVYDINNSAMMNLVEAGASCALNVAEISREADVIISMLPSNQHV 85

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           LD Y G +G+L  A+  V++IDSSTVDP V Q ++  ARE+ + F+D+PVSGG  AA++ 
Sbjct: 86  LDVYTGKNGVLSAAQKDVLLIDSSTVDPSVSQFIALQARERNLRFIDSPVSGGVNAAKDG 145

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG +     AK IL  +G  I+HCGD G GQ AKLCNNMLL ++M+G AEA NL
Sbjct: 146 TLTFMVGGTEMHFNDAKSILGALGSRILHCGDVGMGQAAKLCNNMLLAISMIGTAEAFNL 205

Query: 181 GVK 183
           G K
Sbjct: 206 GQK 208

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307205358|gb|EFN83706.1| 3-hydroxyisobutyrate dehydrogenase, mitochondrial [Harpegnathos saltator]

 Score =  199 bits (507), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 96/183 (52%), Positives = 127/183 (69%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG HMARNLL  G+ + VYD N  A   L ++GA+ A S + ++   E I+SMLP++Q V
Sbjct: 11  MGCHMARNLLTKGYKLSVYDVNKSAITGLVEKGASDASSAAEVSKEVEVIVSMLPSNQHV 70

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           LD Y G  G+L  AK   ++IDSSTVDP + Q+++  A+ + + F+D+PVSGG  AA+  
Sbjct: 71  LDVYTGEHGVLSAAKENTLLIDSSTVDPSISQSVATEAQRRNLRFIDSPVSGGVNAAKNG 130

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG K+  + AKP+L+ MG  IVHCGD G GQ AKLCNNMLL ++M+G AE  NL
Sbjct: 131 TLTFMVGGTKTDFDAAKPVLEAMGSRIVHCGDVGMGQAAKLCNNMLLAISMIGTAETFNL 190

Query: 181 GVK 183
           G K
Sbjct: 191 GQK 193

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307186775|gb|EFN72210.1| 3-hydroxyisobutyrate dehydrogenase, mitochondrial [Camponotus floridanus]

 Score =  198 bits (504), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 96/183 (52%), Positives = 129/183 (70%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG HMA+NLLK  + + VYD N  A   L + GAN A +++ ++   E +ISMLP++Q V
Sbjct: 1   MGGHMAKNLLKKNYKLTVYDLNKSAVSNLVEAGANSASNVAEMSREVEIVISMLPSNQHV 60

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           +D Y G +GIL  AK  V++IDSSTVDP V Q++++ A++  + F+D+PVSGG  AA++ 
Sbjct: 61  VDVYTGENGILSAAKKNVLLIDSSTVDPSVSQSIASQAKKDNLRFIDSPVSGGINAAKDG 120

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG     + AK IL+ MG  IV+CGD G GQ AKLCNNMLL ++M+G AEA NL
Sbjct: 121 TLTFMVGGSNIDFDYAKSILEAMGSRIVYCGDIGMGQAAKLCNNMLLAISMIGTAEAFNL 180

Query: 181 GVK 183
           G K
Sbjct: 181 GQK 183

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709790|ref|XP_003393484.1| PREDICTED: 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like [Bombus terrestris]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 96/183 (52%), Positives = 129/183 (70%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG HMARN+L+NGH ++V+D N  A   L + GAN A   + +    E ++SMLP++QDV
Sbjct: 32  MGGHMARNILRNGHKLVVFDVNESAVSKLTEVGANRASDPTEVVKNVEVVVSMLPSNQDV 91

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           LD Y+  +G+L  A+   ++IDSST+DP V Q L+  A +  + F+D+PVSGG  AA++ 
Sbjct: 92  LDVYNIKNGLLSAARRDTLLIDSSTIDPFVSQILAKEAEKFNVNFIDSPVSGGINAAKDG 151

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG K + E AKP+LK MG  I+HCG+ G GQ AKLCNNMLL ++M+G AEA NL
Sbjct: 152 TLTFMVGGSKENFELAKPLLKSMGSKIIHCGNVGMGQAAKLCNNMLLAISMIGTAEAFNL 211

Query: 181 GVK 183
           G K
Sbjct: 212 GQK 214

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350407062|ref|XP_003487971.1| PREDICTED: 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like [Bombus impatiens]

 Score =  196 bits (498), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 96/183 (52%), Positives = 129/183 (70%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG HMARN+L+NGH ++V+D N  A   L + GA+ A   + +    E ++SMLP++QDV
Sbjct: 32  MGGHMARNILRNGHKLVVFDVNESAVSNLTEVGADRASDPTEVVKDVEVVVSMLPSNQDV 91

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           LD Y+  +G+L  AK   ++IDSST+DP V Q L+  A +  + F+D+PVSGG  AA++ 
Sbjct: 92  LDVYNIKNGLLSSAKRDTLLIDSSTIDPFVSQILAKEAEKMSVNFIDSPVSGGINAAKDG 151

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG K + E AKP+LK MG  I+HCG+ G GQ AKLCNNMLL ++M+G AEA NL
Sbjct: 152 TLTFMVGGSKENFELAKPLLKSMGSKIIHCGNVGMGQAAKLCNNMLLAISMIGTAEAFNL 211

Query: 181 GVK 183
           G K
Sbjct: 212 GQK 214

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|330844093|ref|XP_003293971.1| 3-hydroxyisobutyrate dehydrogenase [Dictyostelium purpureum] gi|325075633|gb|EGC29496.1| 3-hydroxyisobutyrate dehydrogenase [Dictyostelium purpureum]

 Score =  196 bits (497), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 98/183 (53%), Positives = 135/183 (73%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+H A NL+K GH+++V+D + D    L ++GA++A S + LA   + I++MLPAS+ V
Sbjct: 32  MGAHQAANLIKKGHNLMVFDLSKDNVNKLKEKGASVASSPAELAKNCDVIVTMLPASKHV 91

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
              Y G +GIL   KPG +++DSST+DP+  + +S +A E + T LD PVSGGT  A+  
Sbjct: 92  KGVYCGENGILSTVKPGTLLLDSSTIDPETAREVSKIASEHKATMLDCPVSGGTGGAEAG 151

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG +S   KAKP L+CMG+NIVHCG  G GQVAK+CNN++LG++M+GV+EAMNL
Sbjct: 152 TLTFMVGGSESDFNKAKPYLECMGKNIVHCGGVGTGQVAKVCNNLVLGISMVGVSEAMNL 211

Query: 181 GVK 183
           GVK
Sbjct: 212 GVK 214

Source: Dictyostelium purpureum

Species: Dictyostelium purpureum

Genus: Dictyostelium

Order: Dictyosteliida

Superkingdom: Eukaryota

>gi|383859099|ref|XP_003705035.1| PREDICTED: 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like [Megachile rotundata]

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 97/183 (53%), Positives = 127/183 (69%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGSHMARNLLK G+ ++VYD N  A   L + GA+ A + + LA   + ++SMLP++Q V
Sbjct: 32  MGSHMARNLLKKGYKLVVYDVNESAMSNLTEAGADKASNTAELAKDVDVVVSMLPSNQHV 91

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           LD YD  +G+L  AK   ++IDSST+DP V QT++  A E    F+D PVSGG  AA++ 
Sbjct: 92  LDVYDIKNGLLSSAKRDTLLIDSSTIDPFVSQTVAKNAGEVGARFVDCPVSGGVNAAKDG 151

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG K + + A+  LK MG  IVHCGD G GQ AKLCNNM+L ++M+G AEA +L
Sbjct: 152 TLTFMVGGSKENFQLAESFLKSMGSRIVHCGDVGMGQAAKLCNNMILAISMIGTAEAFHL 211

Query: 181 GVK 183
           G K
Sbjct: 212 GQK 214

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242004397|ref|XP_002423077.1| 3-hydroxyisobutyrate dehydrogenase, putative [Pediculus humanus corporis] gi|212506008|gb|EEB10339.1| 3-hydroxyisobutyrate dehydrogenase, putative [Pediculus humanus corporis]

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 95/181 (52%), Positives = 130/181 (71%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  M+ NLLKN + V+VYD   +  +    +GA  A S + LAS  + +++MLP +Q V
Sbjct: 26  MGRPMSLNLLKNEYPVVVYDVLEEVMEQSKHDGAKTASSPADLASKVDVVLTMLPTNQHV 85

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           LD Y G +G+ + AK   I+IDSSTVDP V  T++  A E++ +F+DAPVSGG   A++ 
Sbjct: 86  LDCYQGPNGVFEGAKKDTILIDSSTVDPSVSVTINKGATERRTSFVDAPVSGGVIGAKDG 145

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG++S     KPIL+CMG NIV+CG +G+GQ AK+CNNMLLG+TM+GV+EA+NL
Sbjct: 146 TLTFMVGGEESVYRIVKPILECMGSNIVYCGKAGSGQAAKICNNMLLGITMLGVSEALNL 205

Query: 181 G 181
           G
Sbjct: 206 G 206

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443702325|gb|ELU00414.1| hypothetical protein CAPTEDRAFT_150998 [Capitella teleta]

 Score =  194 bits (494), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 94/182 (51%), Positives = 130/182 (71%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+HMARNL+KN +DV+V+D N  A +++   G   A S + +A+  + I++MLP+S  V
Sbjct: 45  MGAHMARNLVKNDYDVVVFDLNEAAVKSVTDVGGKSASSPAEIAAQMKTIVTMLPSSPHV 104

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
              Y G +GI    + G +++DSST+DP V Q +  LA+EK   F+DAPVSGG  AA++A
Sbjct: 105 KSVYTGDNGIFSTVQSGTLLLDSSTIDPSVSQEMDVLAQEKGSVFMDAPVSGGVVAARDA 164

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            LTFMVGG +S  E+AK IL  MG+N+VHCG  G GQ AK+CNNMLLG++M+G +EAMNL
Sbjct: 165 LLTFMVGGPESKFEEAKGILSKMGKNVVHCGGVGTGQAAKICNNMLLGISMIGASEAMNL 224

Query: 181 GV 182
           G+
Sbjct: 225 GI 226

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
DICTYBASE|DDB_G0292566	321	hibA "3-hydroxyisobutyrate deh	1.0	0.570	0.508	4.7e-48
UNIPROTKB|Q5ZLI9	333	HIBADH "Uncharacterized protei	1.0	0.549	0.475	5.7e-43
MGI|MGI:1889802	335	Hibadh "3-hydroxyisobutyrate d	1.0	0.546	0.469	9.3e-43
UNIPROTKB|F1PYB6	336	HIBADH "Uncharacterized protei	1.0	0.544	0.475	1.2e-42
UNIPROTKB|P31937	336	HIBADH "3-hydroxyisobutyrate d	1.0	0.544	0.475	1.2e-42
UNIPROTKB|Q5R5E7	336	HIBADH "3-hydroxyisobutyrate d	1.0	0.544	0.475	1.2e-42
UNIPROTKB|Q2HJD7	336	HIBADH "3-hydroxyisobutyrate d	1.0	0.544	0.469	1.9e-42
RGD|708399	335	Hibadh "3-hydroxyisobutyrate d	1.0	0.546	0.464	3.2e-42
ZFIN|ZDB-GENE-040801-264	328	hibadha "3-hydroxyisobutyrate	1.0	0.557	0.480	4e-42
ZFIN|ZDB-GENE-040426-1582	329	hibadhb "3-hydroxyisobutyrate	1.0	0.556	0.469	5.9e-41

DICTYBASE|DDB_G0292566 hibA "3-hydroxyisobutyrate dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
 Identities = 93/183 (50%), Positives = 132/183 (72%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG H A NL+K GH++IV+D + D    L ++GA +A S + +A  A+ I++MLPAS  V
Sbjct:    33 MGGHQAINLIKKGHNLIVFDMSKDNMNRLKEKGAKIANSPAEVAKEADVIVTMLPASAHV 92

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
              + Y G +GI +  +PG +++DSST+DP   + ++++A++ Q T LD PVSGGT  A+  
Sbjct:    93 KNVYCGENGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSGGTGGAEAG 152

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
             TLTFMVGG +     AK  L+CMG+NIVHCGD G GQVAK+CNN++LG++M+ V+EAMNL
Sbjct:   153 TLTFMVGGSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNL 212

Query:   181 GVK 183
             GVK
Sbjct:   213 GVK 215

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|Q5ZLI9 HIBADH "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 87/183 (47%), Positives = 125/183 (68%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG+ MA+NL+K+G+ VI YD   +A +     GA +  S + +A  A+ II+MLP+S + 
Sbjct:    47 MGNPMAKNLIKHGYPVIAYDVFPEACKEFQDLGAQVTDSPADVAERADRIITMLPSSPNA 106

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             ++ Y G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct:   107 IEVYTGANGILKKVKKGSLLIDSSTIDPSVSKELAKAVEKMGAVFMDAPVSGGVGAARAG 166

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
              LTFMVGG +   + AK +L CMG N+V+CG+ G GQ AK+CNNMLL ++M+G AE MNL
Sbjct:   167 NLTFMVGGMEQEFDAAKELLICMGSNVVYCGEVGTGQAAKICNNMLLAISMIGTAETMNL 226

Query:   181 GVK 183
             G++
Sbjct:   227 GIR 229

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0006573 "valine metabolic process" evidence=IEA

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

MGI|MGI:1889802 Hibadh "3-hydroxyisobutyrate dehydrogenase" [Mus musculus (taxid:10090)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 86/183 (46%), Positives = 126/183 (68%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG+ MA+NL+K+G+ +I+YD   D  +   + G  +A S + +A  A+ II+MLP+S + 
Sbjct:    49 MGNPMAKNLMKHGYPLILYDVFPDVCKEFKEAGEQVASSPAEVAEKADRIITMLPSSMNA 108

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             ++ Y G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct:   109 VEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 168

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
              LTFMVGG +     A+ +L+CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct:   169 NLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNL 228

Query:   181 GVK 183
             G++
Sbjct:   229 GIR 231

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0006573 "valine metabolic process" evidence=IEA

GO:0006574 "valine catabolic process" evidence=ISO

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|F1PYB6 HIBADH "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 87/183 (47%), Positives = 124/183 (67%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct:    50 MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINA 109

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct:   110 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
              LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct:   170 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 229

Query:   181 GVK 183
             G++
Sbjct:   230 GIR 232

GO:0051287 "NAD binding" evidence=IEA

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=IEA

GO:0006573 "valine metabolic process" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

UNIPROTKB|P31937 HIBADH "3-hydroxyisobutyrate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 87/183 (47%), Positives = 124/183 (67%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct:    50 MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINA 109

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct:   110 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
              LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct:   170 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 229

Query:   181 GVK 183
             G++
Sbjct:   230 GIR 232

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=NAS

GO:0006574 "valine catabolic process" evidence=IEA;IDA

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=IDA;TAS

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0009083 "branched-chain amino acid catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|Q5R5E7 HIBADH "3-hydroxyisobutyrate dehydrogenase, mitochondrial" [Pongo abelii (taxid:9601)]

 Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
 Identities = 87/183 (47%), Positives = 124/183 (67%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct:    50 MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINA 109

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct:   110 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
              LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct:   170 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 229

Query:   181 GVK 183
             G++
Sbjct:   230 GIR 232

GO:0006574 "valine catabolic process" evidence=ISS

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=ISS

UNIPROTKB|Q2HJD7 HIBADH "3-hydroxyisobutyrate dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 86/183 (46%), Positives = 124/183 (67%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct:    50 MGNPMAKNLMKHGYPLIIYDVFPDACKEFLDAGEQVVSSPADVAEKADRIITMLPTSINA 109

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct:   110 IEAYSGANGILKKVKKGSLLIDSSTIDPMVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
              LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNN+LL ++M+G AEAMNL
Sbjct:   170 NLTFMVGGVEEEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNLLLAISMIGTAEAMNL 229

Query:   181 GVK 183
             G++
Sbjct:   230 GIR 232

GO:0006574 "valine catabolic process" evidence=ISS

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

RGD|708399 Hibadh "3-hydroxyisobutyrate dehydrogenase" [Rattus norvegicus (taxid:10116)]

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 85/183 (46%), Positives = 127/183 (69%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG+ MA+NL+K+G+ +I+YD   D  +   + G  +A S + +A  A+ II+MLP+S + 
Sbjct:    49 MGNPMAKNLIKHGYPLILYDVFPDVCKEFKEAGEQVASSPADVAEKADRIITMLPSSMNS 108

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             ++ Y G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct:   109 IEVYSGANGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 168

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
              LTFMVGG ++    A+ +L CMG N+++CG  G+GQ AK+CNNMLL ++M+G AEAMNL
Sbjct:   169 NLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNL 228

Query:   181 GVK 183
             G++
Sbjct:   229 GIR 231

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0006574 "valine catabolic process" evidence=ISO;ISS

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=ISO;ISS

GO:0051287 "NAD binding" evidence=IEA

ZFIN|ZDB-GENE-040801-264 hibadha "3-hydroxyisobutyrate dehydrogenase a" [Danio rerio (taxid:7955)]

 Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
 Identities = 88/183 (48%), Positives = 124/183 (67%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG+ MARNLLKNG+ VI  D   ++ + L   GA +  S + +A  A+ II+MLP+S +V
Sbjct:    43 MGTPMARNLLKNGYPVIATDAFPESCKELQDSGAQILDSPAEVAEKADRIITMLPSSPNV 102

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             ++ Y GS+ IL+  K G ++IDSST+DP V + ++  A +    F+DAPVSGG  AA  A
Sbjct:   103 IEVYTGSNSILRKVKKGTLLIDSSTIDPAVSKEMAVAAEKMGAVFMDAPVSGGVGAASLA 162

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
              LTF+VGG +     A+ +L CMG N+V+CG  G+GQ AK+CNNMLL + M+G AE MNL
Sbjct:   163 KLTFLVGGVEEEYNAAQELLTCMGANVVYCGQVGSGQAAKICNNMLLAIGMLGTAETMNL 222

Query:   181 GVK 183
             G++
Sbjct:   223 GIR 225

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0006573 "valine metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

ZFIN|ZDB-GENE-040426-1582 hibadhb "3-hydroxyisobutyrate dehydrogenase b" [Danio rerio (taxid:7955)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 86/183 (46%), Positives = 122/183 (66%)

Query:     1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
             MG+ MA+NL+K+G+ VI  D   ++ + L + GA +  S + +A  A+ II+MLP++ +V
Sbjct:    43 MGNPMAKNLIKHGYPVIATDVFPESCKELQELGAQILDSPADVADKADRIITMLPSNPNV 102

Query:    61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             +D Y G +GILK  K G ++IDSST+DP V + ++  A +    F+ APVSGG  AA   
Sbjct:   103 VDVYTGPNGILKKVKKGSLLIDSSTIDPAVSKEMAVAAEKLGAVFMGAPVSGGVGAATSG 162

Query:   121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
              LTFMVGG +     AK +L CMG N+V+CG  G GQ AK+CNNMLL + M+G AE MNL
Sbjct:   163 KLTFMVGGPEEEFNAAKELLSCMGANVVYCGQVGTGQAAKICNNMLLAIGMIGTAETMNL 222

Query:   181 GVK 183
             G++
Sbjct:   223 GIR 225

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0006573 "valine metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0ABQ3	GARR_ECOL6	1, ., 1, ., 1, ., 6, 0	0.3825	1.0	0.6224	yes	N/A
P28811	MMSB_PSEAE	1, ., 1, ., 1, ., 3, 1	0.4972	1.0	0.6140	yes	N/A
P63935	MMSB_MYCTU	1, ., 1, ., 1, ., 3, 1	0.4098	0.9836	0.6122	yes	N/A
P63936	MMSB_MYCBO	1, ., 1, ., 1, ., 3, 1	0.4098	0.9836	0.6122	yes	N/A
Q54CX6	3HIDH_DICDI	1, ., 1, ., 1, ., 3, 1	0.5081	1.0	0.5700	yes	N/A
Q9XTI0	3HIDH_CAEEL	1, ., 1, ., 1, ., 3, 1	0.4699	0.9945	0.6086	yes	N/A
O34948	YKWC_BACSU	1, ., 1, ., -, ., -	0.3989	1.0	0.6354	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	183
COG2084	286	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase	1e-69
TIGR01692	288	TIGR01692, HIBADH, 3-hydroxyisobutyrate dehydrogen	1e-69
pfam03446	163	pfam03446, NAD_binding_2, NAD binding domain of 6-	4e-60
PRK11559	296	PRK11559, garR, tartronate semialdehyde reductase;	4e-52
TIGR01505	291	TIGR01505, tartro_sem_red, 2-hydroxy-3-oxopropiona	7e-45
PRK15461	296	PRK15461, PRK15461, NADH-dependent gamma-hydroxybu	1e-35
PRK09599	301	PRK09599, PRK09599, 6-phosphogluconate dehydrogena	3e-26
PRK15059	292	PRK15059, PRK15059, tartronate semialdehyde reduct	4e-26
COG1023	300	COG1023, Gnd, Predicted 6-phosphogluconate dehydro	3e-24
PLN02858	1378	PLN02858, PLN02858, fructose-bisphosphate aldolase	2e-21
TIGR00872	298	TIGR00872, gnd_rel, 6-phosphogluconate dehydrogena	3e-20
PRK12490	299	PRK12490, PRK12490, 6-phosphogluconate dehydrogena	6e-20
PLN02858	1378	PLN02858, PLN02858, fructose-bisphosphate aldolase	7e-18
COG0362	473	COG0362, Gnd, 6-phosphogluconate dehydrogenase [Ca	1e-07
TIGR00873	467	TIGR00873, gnd, 6-phosphogluconate dehydrogenase (	4e-06
PTZ00142	470	PTZ00142, PTZ00142, 6-phosphogluconate dehydrogena	1e-05
PRK09287	459	PRK09287, PRK09287, 6-phosphogluconate dehydrogena	3e-05
COG0287	279	COG0287, TyrA, Prephenate dehydrogenase [Amino aci	0.002
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	0.003

>gnl|CDD|224995 COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

 Score =  212 bits (542), Expect = 1e-69
 Identities = 87/184 (47%), Positives = 116/184 (63%), Gaps = 1/184 (0%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDAS-QTLAKEGANMALSLSTLASGAEFIISMLPASQD 59
           MGS MA NLLK GH+V VY++  + + + LA  GA +A S +  A+ A+ +I+MLP    
Sbjct: 11  MGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAA 70

Query: 60  VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQE 119
           V     G +G+L+  KPG IVID ST+ P+  + L+     K + FLDAPVSGG   A  
Sbjct: 71  VRAVLFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVPGAAA 130

Query: 120 ATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMN 179
            TLT MVGGD  + E+AKP+L+ MG+NIVH G  G GQ AKL NN+LL   +  +AEA+ 
Sbjct: 131 GTLTIMVGGDAEAFERAKPVLEAMGKNIVHVGPVGAGQAAKLANNILLAGNIAALAEALA 190

Query: 180 LGVK 183
           L  K
Sbjct: 191 LAEK 194

Length = 286

>gnl|CDD|130753 TIGR01692, HIBADH, 3-hydroxyisobutyrate dehydrogenase

 Score =  212 bits (542), Expect = 1e-69
 Identities = 95/183 (51%), Positives = 116/183 (63%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MA NLLK GH V V+D   DA +     GA  A S +  A GA+ +I+MLPA Q V
Sbjct: 7   MGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHV 66

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           +  Y G +GIL     G ++ID ST+DP   + L+ LA      F+DAPVSGG   A+  
Sbjct: 67  ISVYSGDEGILPKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGGVGGARAG 126

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLTFMVGG       A+P+L  MGRNIVHCGD G GQ AK+CNNMLLG++M+G AEAM L
Sbjct: 127 TLTFMVGGVAEEFAAAEPVLGPMGRNIVHCGDHGAGQAAKICNNMLLGISMIGTAEAMAL 186

Query: 181 GVK 183
           G K
Sbjct: 187 GEK 189

3-hydroxyisobutyrate dehydrogenase is an enzyme that catalyzes the NAD+-dependent oxidation of 3-hydroxyisobutyrate to methylmalonate semialdehyde of the valine catabolism pathway. In Pseudomonas aeruginosa, 3-hydroxyisobutyrate dehydrogenase (mmsB) is co-induced with methylmalonate-semialdehyde dehydrogenase (mmsA) when grown on medium containing valine as the sole carbon source. The positive transcriptional regulator of this operon (mmsR) is located upstream of these genes and has been identified as a member of the XylS/AraC family of transcriptional regulators. 3-hydroxyisobutyrate dehydrogenase shares high sequence homology to the characterized 3-hydroxyisobutyrate dehydrogenase from rat liver with conservation of proposed NAD+ binding residues at the N-terminus (G-8,10,13,24 and D-31). This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446) [Energy metabolism, Amino acids and amines]. Length = 288

>gnl|CDD|217563 pfam03446, NAD_binding_2, NAD binding domain of 6-phosphogluconate dehydrogenase

 Score =  184 bits (469), Expect = 4e-60
 Identities = 67/150 (44%), Positives = 90/150 (60%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGS MA NLLK G+ V VY++  +  + L  EGA  A S +   + A+ +I+M+PA   V
Sbjct: 11  MGSPMALNLLKAGYTVTVYNRTPEKVEELVAEGAVGAASPAEFVASADVVITMVPAGAAV 70

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
                G DG+L   KPG I+ID ST DP   +  +    EK I FLDAPVSGG + A+  
Sbjct: 71  DAVILGEDGLLPGLKPGDIIIDGSTSDPDDTRRRAKELAEKGIHFLDAPVSGGEEGAEAG 130

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHC 150
           TL+ MVGGD+ + E+ KPIL+ MG  + H 
Sbjct: 131 TLSIMVGGDEEAFERVKPILEAMGACVTHY 160

The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold. Length = 163

>gnl|CDD|183197 PRK11559, garR, tartronate semialdehyde reductase; Provisional

 Score =  168 bits (427), Expect = 4e-52
 Identities = 72/183 (39%), Positives = 111/183 (60%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  M++NLLK G+ ++VYD+N +A   +   GA  A +   +A   + II+MLP S  V
Sbjct: 13  MGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHV 72

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G +GI++ AKPG +VID S++ P   + ++   + K I  LDAPVSGG   A + 
Sbjct: 73  KEVALGENGIIEGAKPGTVVIDMSSIAPLASREIAAALKAKGIEMLDAPVSGGEPKAIDG 132

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL+ MVGGDK+  +K   ++K M  ++VH GD G G V KL N +++ + +  ++EA+ L
Sbjct: 133 TLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALVL 192

Query: 181 GVK 183
             K
Sbjct: 193 ATK 195

Length = 296

>gnl|CDD|130569 TIGR01505, tartro_sem_red, 2-hydroxy-3-oxopropionate reductase

 Score =  149 bits (378), Expect = 7e-45
 Identities = 65/183 (35%), Positives = 106/183 (57%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGS M+ NL K G+ + V     + +  L   GA  A +   +   A+ I +M+P S  V
Sbjct: 10  MGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQV 69

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G +GI++ AKPG  ++D S++ P   +  +   +EK I +LDAPVSGG   A E 
Sbjct: 70  EEVAFGENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLDAPVSGGEIGAIEG 129

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL+ MVGGD++  ++ KP+ + +G+NIV  G +G+GQ  K+ N +++ + +  V+EA+  
Sbjct: 130 TLSIMVGGDQAVFDRVKPLFEALGKNIVLVGGNGDGQTCKVANQIIVALNIEAVSEALVF 189

Query: 181 GVK 183
             K
Sbjct: 190 ASK 192

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. Length = 291

>gnl|CDD|185358 PRK15461, PRK15461, NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

 Score =  125 bits (315), Expect = 1e-35
 Identities = 62/166 (37%), Positives = 85/166 (51%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGS MA NLLK GH + V+D N  A   L  +GA  A S +  A+GAEF+I+MLP    V
Sbjct: 12  MGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLV 71

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
                G +G+ +      +VID ST+ P     L    + K  + +D PV   +  A   
Sbjct: 72  RSVLFGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSDNAITG 131

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNML 166
           TL  + GG    +E+A PIL  MG  +++ G  G G   KL NN +
Sbjct: 132 TLLLLAGGTAEQVERATPILMAMGNELINAGGPGMGIRVKLINNYM 177

Length = 296

>gnl|CDD|236582 PRK09599, PRK09599, 6-phosphogluconate dehydrogenase-like protein; Reviewed

 Score =  101 bits (254), Expect = 3e-26
 Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 23/177 (12%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS--GAEFII-SMLPAS 57
           MG +MAR LL+ GH+V+ YD+N +A + LA+EGA  A SL  L +   A  ++  M+PA 
Sbjct: 11  MGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAG 70

Query: 58  Q---DVLDAYDGSDGILKHAKPGVIVID---SSTVDPQVPQTLSNLAREKQITFLDAPVS 111
           +     +D       +     PG IVID   S   D       + L  EK I F+D   S
Sbjct: 71  EITDATIDE------LAPLLSPGDIVIDGGNSYYKDDIR---RAELLAEKGIHFVDVGTS 121

Query: 112 GGTKAAQEATLTFMVGGDKSSLEKAKPILKCM----GRNIVHCGDSGNGQVAKLCNN 164
           GG    +      M+GGDK ++E+ +PI K +        +H G  G G   K+ +N
Sbjct: 122 GGVWGLERG-YCLMIGGDKEAVERLEPIFKALAPRAEDGYLHAGPVGAGHFVKMVHN 177

Length = 301

>gnl|CDD|185019 PRK15059, PRK15059, tartronate semialdehyde reductase; Provisional

 Score =  100 bits (251), Expect = 4e-26
 Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 1/183 (0%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA NL + GH + V      A + L   GA    +   +   ++ I  M+P +  V
Sbjct: 11  MGTPMAINLARAGHQLHVTTIGPVADELL-SLGAVSVETARQVTEASDIIFIMVPDTPQV 69

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G +G  K +  G  ++D S++ P   +  +    E    +LDAPVSGG   A+E 
Sbjct: 70  EEVLFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREG 129

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL+ MVGGD++  E+ KP+ + +G+NI   G +G+GQ  K+ N +++ + +  V+EA+  
Sbjct: 130 TLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLF 189

Query: 181 GVK 183
             K
Sbjct: 190 ASK 192

Length = 292

>gnl|CDD|223954 COG1023, Gnd, Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

 Score = 95.9 bits (239), Expect = 3e-24
 Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 10/186 (5%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS--GAEFII-SMLPAS 57
           MG+++ R LL  GHDV+ YD N  A + L  EGA  A SL  L +   A  I+  M+PA 
Sbjct: 11  MGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAG 70

Query: 58  QDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAA 117
                  D    +L     G IVID    + +     + L  EK I FLD   SGG   A
Sbjct: 71  DITDAVIDDLAPLL---SAGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSGGVWGA 127

Query: 118 QEATLTFMVGGDKSSLEKAKPILK--CMGRN-IVHCGDSGNGQVAKLCNNMLLGVTMMGV 174
           +      M+GGD+ ++E+ +PI K    G +  ++CG SG+G   K+ +N +    M  +
Sbjct: 128 ERG-YCLMIGGDEEAVERLEPIFKALAPGEDGYLYCGPSGSGHFVKMVHNGIEYGMMQAI 186

Query: 175 AEAMNL 180
           AE   L
Sbjct: 187 AEGFEL 192

Length = 300

>gnl|CDD|215463 PLN02858, PLN02858, fructose-bisphosphate aldolase

 Score = 90.3 bits (224), Expect = 2e-21
 Identities = 58/186 (31%), Positives = 81/186 (43%), Gaps = 3/186 (1%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MA +LLK+   V  YD            G     S + +A   + ++ M+      
Sbjct: 335 MGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQA 394

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQ-VPQTLSNLARE-KQITFLDAPVSGGTKAAQ 118
            +   G  G +     G  ++ SSTV P  V Q    L  E + I  +DAPVSGG K A 
Sbjct: 395 ENVLFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVKRAA 454

Query: 119 EATLTFMVGGDKSSLEKAKPILKCMGRNI-VHCGDSGNGQVAKLCNNMLLGVTMMGVAEA 177
             TLT M  G   +L+ A  +L  +   + V  G  G G   K+ N +L GV +   AEA
Sbjct: 455 MGTLTIMASGTDEALKSAGSVLSALSEKLYVIKGGCGAGSGVKMVNQLLAGVHIASAAEA 514

Query: 178 MNLGVK 183
           M  G +
Sbjct: 515 MAFGAR 520

Length = 1378

>gnl|CDD|233163 TIGR00872, gnd_rel, 6-phosphogluconate dehydrogenase (decarboxylating)

 Score = 85.3 bits (211), Expect = 3e-20
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 19/190 (10%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSL---STLASGAEFIISMLPAS 57
           MG+++ R L K GHD + YD + DA + + ++      +L   S   S    +  M+P  
Sbjct: 11  MGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG 70

Query: 58  QDVLDAYDGSDGILKHAKP----GVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGG 113
                     D +L+   P    G IVID      +       L +EK I  LD   SGG
Sbjct: 71  --------IVDAVLEELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSGG 122

Query: 114 TKAAQEATLTFMVGGDKSSLEKAKPILKCMG---RNIVHCGDSGNGQVAKLCNNMLLGVT 170
                E    FM+GGD  +  +A+P+   +    +  ++CG  G+G   K+ +N +    
Sbjct: 123 VWGR-ERGYCFMIGGDGEAFARAEPLFADVAPEEQGYLYCGPCGSGHFVKMVHNGIEYGM 181

Query: 171 MMGVAEAMNL 180
           M  +AE   +
Sbjct: 182 MAAIAEGFEI 191

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle [Energy metabolism, Pentose phosphate pathway]. Length = 298

>gnl|CDD|237116 PRK12490, PRK12490, 6-phosphogluconate dehydrogenase-like protein; Reviewed

 Score = 84.4 bits (209), Expect = 6e-20
 Identities = 54/186 (29%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS---GAEFIISMLPAS 57
           MG +MA  L ++GH+V+ YD N +A     K G     SL  L S       I  M+PA 
Sbjct: 11  MGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAG 70

Query: 58  QDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAA 117
           +           +L    PG IV+D      +     +    E+ I ++D   SGG    
Sbjct: 71  EVTESVIKDLYPLL---SPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVWGL 127

Query: 118 QEATLTFMVGGDKSSLEKAKPILKCM---GRNIVHCGDSGNGQVAKLCNNMLLGVTMMGV 174
           +      MVGGDK   ++ +P+ K +   G   VH G  G+G   K+ +N +    M   
Sbjct: 128 RNG-YCLMVGGDKEIYDRLEPVFKALAPEGPGYVHAGPVGSGHFLKMVHNGIEYGMMQAY 186

Query: 175 AEAMNL 180
           AE + L
Sbjct: 187 AEGLEL 192

Length = 299

>gnl|CDD|215463 PLN02858, PLN02858, fructose-bisphosphate aldolase

 Score = 80.3 bits (198), Expect = 7e-18
 Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 3/186 (1%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           +   +A +LL++G  V  ++ +T   +   + G +   S +  A  A  ++ +L     V
Sbjct: 15  LSFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQV 74

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSN-LAREKQITFL-DAPVSGGTKAAQ 118
            D + G +G  K  + G +++  ST+ P   Q L   L   K+  FL DA VS G     
Sbjct: 75  DDVFFGDEGAAKGLQKGAVILIRSTILPLQLQKLEKKLTERKEQIFLVDAYVSKGMSDLL 134

Query: 119 EATLTFMVGGDKSSLEKAKPILKCMGRNI-VHCGDSGNGQVAKLCNNMLLGVTMMGVAEA 177
              L  +  G   ++ +A+P L  M + +    G+ G G   K+ N +L G+ ++  AEA
Sbjct: 135 NGKLMIIASGRSDAITRAQPFLSAMCQKLYTFEGEIGAGSKVKMVNELLEGIHLVASAEA 194

Query: 178 MNLGVK 183
           M LGV+
Sbjct: 195 MALGVR 200

Length = 1378

>gnl|CDD|223439 COG0362, Gnd, 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 18/151 (11%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-----ALSLSTLASGAE---FIIS 52
           MGS++A N+  +G+ V VY++ T+ +     E A       A S+    +  E    I+ 
Sbjct: 14  MGSNLALNIADHGYTVAVYNRTTEKTDEFLAERAKGKNIVPAYSIEEFVASLEKPRKILL 73

Query: 53  MLPASQDVLDAYDGSDGILKHAKPGVIVID---SSTVDPQVPQTLSNLAREKQITFLDAP 109
           M+ A   V DA    + +L   + G I+ID   S   D    +    L+ EK I F+   
Sbjct: 74  MVKAGTPV-DAV--IEQLLPLLEKGDIIIDGGNSHYKDTI--RRNKELS-EKGILFVGMG 127

Query: 110 VSGGTKAAQEATLTFMVGGDKSSLEKAKPIL 140
           VSGG + A+    + M GG K + E   PIL
Sbjct: 128 VSGGEEGARHGP-SIMPGGQKEAYELVAPIL 157

Length = 473

>gnl|CDD|129951 TIGR00873, gnd, 6-phosphogluconate dehydrogenase (decarboxylating)

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 14/149 (9%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEF---------II 51
           MGS++A N+  +G  V VY++  + +     E A     +    S  EF         I+
Sbjct: 10  MGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAK-GKKIVGAYSIEEFVQSLERPRKIM 68

Query: 52  SMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVS 111
            M+ A   V DA    + +L   + G I+ID         +      + K I F+ + VS
Sbjct: 69  LMVKAGAPV-DAV--INQLLPLLEKGDIIIDGGNSHYPDTERRYKELKAKGILFVGSGVS 125

Query: 112 GGTKAAQEATLTFMVGGDKSSLEKAKPIL 140
           GG + A++   + M GG   +     PI 
Sbjct: 126 GGEEGARKGP-SIMPGGSAEAWPLVAPIF 153

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason [Energy metabolism, Pentose phosphate pathway]. Length = 467

>gnl|CDD|240287 PTZ00142, PTZ00142, 6-phosphogluconate dehydrogenase; Provisional

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 17/178 (9%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS-------- 52
           MG ++A N+   G  + VY++  + ++   K+       +    +  E + S        
Sbjct: 12  MGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVI 71

Query: 53  MLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG 112
           +L  + + +D     D +L   + G I+ID         +       EK I +L   VSG
Sbjct: 72  LLIKAGEAVDET--IDNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYLGMGVSG 129

Query: 113 GTKAAQEATLTFMVGGDKSSLEKAKPIL-KCMGRN-----IVHCGDSGNGQVAKLCNN 164
           G + A+    + M GG+K + +  K IL KC  +      + + G   +G   K+ +N
Sbjct: 130 GEEGARYGP-SLMPGGNKEAYDHVKDILEKCSAKVGDSPCVTYVGPGSSGHYVKMVHN 186

Length = 470

>gnl|CDD|236453 PRK09287, PRK09287, 6-phosphogluconate dehydrogenase; Validated

 Score = 43.2 bits (103), Expect = 3e-05
 Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 46/166 (27%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE---GANM--ALSLSTLASGAE---FIIS 52
           MG ++A N+  +G+ V VY++  + +     E   G  +  A +L    +  E    I+ 
Sbjct: 1   MGKNLALNIASHGYTVAVYNRTPEKTDEFLAEEGKGKKIVPAYTLEEFVASLEKPRKILL 60

Query: 53  MLPASQ---DVLDAYDGSDGILKHAKPGVIVIDS------STVDPQVPQTLSNLAREKQ- 102
           M+ A      V++       +L   + G I+ID        T+            REK+ 
Sbjct: 61  MVKAGAPVDAVIEQ------LLPLLEKGDIIIDGGNSNYKDTI-----------RREKEL 103

Query: 103 ----ITFLDAPVSGGTKAAQEATLT---FMVGGDKSSLEKAKPILK 141
               I F+   VSGG + A    L     M GG K + E   PIL+
Sbjct: 104 AEKGIHFIGMGVSGGEEGA----LHGPSIMPGGQKEAYELVAPILE 145

Length = 459

>gnl|CDD|223364 COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism]

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 13/93 (13%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLST-----LASGAEFIISMLP 55
           MG  +AR L + G  V +  ++  A+   A     +   L+       A+ A+ +I  +P
Sbjct: 14  MGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVP 73

Query: 56  ASQ--DVLDAYDGSDGILKHAKPGVIVIDSSTV 86
                +VL           H K G IV D  +V
Sbjct: 74  IEATEEVLKELA------PHLKKGAIVTDVGSV 100

Length = 279

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 12/19 (63%), Positives = 14/19 (73%)

Query: 2  GSHMARNLLKNGHDVIVYD 20
          GSH  R LLK GH+V+V D
Sbjct: 13 GSHTVRQLLKTGHEVVVLD 31

Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	100.0
KOG0409|consensus	327		100.0
PRK09287	459	6-phosphogluconate dehydrogenase; Validated	100.0
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	100.0
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	100.0
PRK15059	292	tartronate semialdehyde reductase; Provisional	100.0
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	100.0
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	100.0
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	100.0
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	100.0
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	100.0
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	100.0
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	100.0
PLN02858	1378	fructose-bisphosphate aldolase	100.0
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	99.98
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	99.98
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	99.97
PLN02858	1378	fructose-bisphosphate aldolase	99.97
COG0362	473	Gnd 6-phosphogluconate dehydrogenase [Carbohydrate	99.96
KOG2653|consensus	487		99.93
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	99.93
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	99.91
PRK12557	342	H(2)-dependent methylenetetrahydromethanopterin de	99.91
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	99.89
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	99.89
PRK08507	275	prephenate dehydrogenase; Validated	99.82
PRK07417	279	arogenate dehydrogenase; Reviewed	99.82
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	99.8
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	99.8
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	99.79
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	99.78
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	99.78
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	99.78
PRK08655	437	prephenate dehydrogenase; Provisional	99.77
PF02153	258	PDH: Prephenate dehydrogenase; InterPro: IPR003099	99.76
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	99.75
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	99.75
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	99.75
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	99.73
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	99.73
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	99.72
PRK08269	314	3-hydroxybutyryl-CoA dehydrogenase; Validated	99.72
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	99.71
PRK06545	359	prephenate dehydrogenase; Validated	99.71
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	99.7
PLN02688	266	pyrroline-5-carboxylate reductase	99.7
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	99.68
PLN02353	473	probable UDP-glucose 6-dehydrogenase	99.68
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	99.68
PLN02256	304	arogenate dehydrogenase	99.68
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	99.68
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	99.67
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	99.66
PRK08818	370	prephenate dehydrogenase; Provisional	99.65
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	99.65
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	99.64
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	99.63
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	99.63
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	99.61
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	99.6
PRK14806	735	bifunctional cyclohexadienyl dehydrogenase/ 3-phos	99.58
PRK07680	273	late competence protein ComER; Validated	99.57
PLN02712	667	arogenate dehydrogenase	99.57
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	99.54
PLN02712	667	arogenate dehydrogenase	99.53
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	99.53
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	99.53
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	99.52
COG1250	307	FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo	99.51
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	99.49
PRK11730	715	fadB multifunctional fatty acid oxidation complex	99.47
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	99.45
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	99.45
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	99.45
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	99.45
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	99.44
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	99.41
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	99.41
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	99.39
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	99.38
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	99.35
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	99.35
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	99.33
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	99.31
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	99.29
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	99.29
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	99.28
TIGR00112	245	proC pyrroline-5-carboxylate reductase. This enzym	99.26
PRK05479	330	ketol-acid reductoisomerase; Provisional	99.18
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	99.18
PTZ00431	260	pyrroline carboxylate reductase; Provisional	99.17
KOG2304|consensus	298		99.13
PLN03139	386	formate dehydrogenase; Provisional	99.12
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	99.11
PRK07574	385	formate dehydrogenase; Provisional	99.11
COG4007	340	Predicted dehydrogenase related to H2-forming N5,N	99.1
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	99.06
PRK06444	197	prephenate dehydrogenase; Provisional	99.0
PRK12480	330	D-lactate dehydrogenase; Provisional	99.0
PRK13243	333	glyoxylate reductase; Reviewed	99.0
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	98.97
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	98.95
PRK06436	303	glycerate dehydrogenase; Provisional	98.95
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	98.87
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	98.86
PRK08605	332	D-lactate dehydrogenase; Validated	98.85
TIGR00745	293	apbA_panE 2-dehydropantoate 2-reductase. This mode	98.8
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	98.8
PRK13403	335	ketol-acid reductoisomerase; Provisional	98.8
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	98.8
KOG2305|consensus	313		98.78
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	98.73
PLN02928	347	oxidoreductase family protein	98.71
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	98.7
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.69
PRK11861	673	bifunctional prephenate dehydrogenase/3-phosphoshi	98.68
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	98.68
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	98.68
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	98.65
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	98.64
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	98.6
PRK06487	317	glycerate dehydrogenase; Provisional	98.58
PRK00961	342	H(2)-dependent methylenetetrahydromethanopterin de	98.52
PRK06932	314	glycerate dehydrogenase; Provisional	98.5
KOG0069|consensus	336		98.49
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.48
KOG2380|consensus	480		98.47
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.45
PLN02306	386	hydroxypyruvate reductase	98.44
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	98.44
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.44
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	98.4
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	98.39
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	98.38
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	98.37
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	98.34
PRK06141	314	ornithine cyclodeaminase; Validated	98.32
TIGR01723	340	hmd_TIGR 5,10-methenyltetrahydromethanopterin hydr	98.27
KOG2666|consensus	481		98.24
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.19
KOG2711|consensus	372		98.16
PRK13304	265	L-aspartate dehydrogenase; Reviewed	98.13
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	98.06
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.05
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.96
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	97.95
PF03720	106	UDPG_MGDP_dh_C: UDP-glucose/GDP-mannose dehydrogen	97.94
KOG3124|consensus	267		97.89
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	97.86
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.85
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.81
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.81
PRK07340	304	ornithine cyclodeaminase; Validated	97.81
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.8
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	97.79
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.78
PRK06823	315	ornithine cyclodeaminase; Validated	97.71
PLN02494	477	adenosylhomocysteinase	97.7
PRK06407	301	ornithine cyclodeaminase; Provisional	97.7
KOG0068|consensus	406		97.7
COG5495	289	Uncharacterized conserved protein [Function unknow	97.69
COG0059	338	IlvC Ketol-acid reductoisomerase [Amino acid trans	97.68
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	97.66
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.66
COG2423	330	Predicted ornithine cyclodeaminase, mu-crystallin	97.61
PRK08618	325	ornithine cyclodeaminase; Validated	97.6
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.58
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.57
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	97.55
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	97.54
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.47
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.47
PLN00203	519	glutamyl-tRNA reductase	97.45
PRK08291	330	ectoine utilization protein EutC; Validated	97.42
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	97.37
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.37
TIGR01921	324	DAP-DH diaminopimelate dehydrogenase. This model r	97.35
PRK06046	326	alanine dehydrogenase; Validated	97.35
PRK04148	134	hypothetical protein; Provisional	97.33
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.33
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.3
PRK05225	487	ketol-acid reductoisomerase; Validated	97.28
PRK07589	346	ornithine cyclodeaminase; Validated	97.27
PRK10669	558	putative cation:proton antiport protein; Provision	97.24
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.24
TIGR03855	229	NAD_NadX aspartate dehydrogenase. Members of this	97.22
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	97.18
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.17
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.14
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.12
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.12
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.1
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	97.07
TIGR01761	343	thiaz-red thiazolinyl imide reductase. This reduct	97.06
KOG1683|consensus	380		97.01
PRK12548	289	shikimate 5-dehydrogenase; Provisional	96.98
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.96
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.94
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.91
PRK00048	257	dihydrodipicolinate reductase; Provisional	96.9
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.84
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.83
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.81
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.74
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.71
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.7
COG0673	342	MviM Predicted dehydrogenases and related proteins	96.69
PRK06223	307	malate dehydrogenase; Reviewed	96.64
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.63
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.62
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.62
PRK06199	379	ornithine cyclodeaminase; Validated	96.62
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.57
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.56
PF03447	117	NAD_binding_3: Homoserine dehydrogenase, NAD bindi	96.56
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.55
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.55
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.54
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.54
PRK00683	418	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.51
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.5
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	96.5
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.48
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	96.48
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.47
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.46
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.44
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.43
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.43
cd05297	423	GH4_alpha_glucosidase_galactosidase Glycoside Hydr	96.41
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.41
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.41
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.4
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	96.4
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.36
KOG3007|consensus	333		96.35
PRK09496	453	trkA potassium transporter peripheral membrane com	96.32
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.32
TIGR00036	266	dapB dihydrodipicolinate reductase.	96.29
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.27
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.26
PLN02616	364	tetrahydrofolate dehydrogenase/cyclohydrolase, put	96.24
COG4074	343	Mth H2-forming N5,N10-methylenetetrahydromethanopt	96.23
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.22
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.19
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.19
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.17
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.17
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.16
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	96.16
PRK13303	265	L-aspartate dehydrogenase; Provisional	96.16
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.07
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.04
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.01
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.99
PTZ00117	319	malate dehydrogenase; Provisional	95.87
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.79
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.79
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	95.76
COG0190	283	FolD 5,10-methylene-tetrahydrofolate dehydrogenase	95.76
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	95.76
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.75
PRK14168	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.74
COG0499	420	SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me	95.69
KOG1200|consensus	256		95.65
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	95.64
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.56
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.56
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.55
PRK13301	267	putative L-aspartate dehydrogenase; Provisional	95.53
PRK14174	295	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.49
PF05222	136	AlaDh_PNT_N: Alanine dehydrogenase/PNT, N-terminal	95.4
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.37
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	95.29
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.27
COG0300	265	DltE Short-chain dehydrogenases of various substra	95.22
PRK14982	340	acyl-ACP reductase; Provisional	95.19
PRK05678	291	succinyl-CoA synthetase subunit alpha; Validated	95.19
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	95.02
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	95.02
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	94.99
KOG2741|consensus	351		94.97
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	94.93
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	94.9
PRK05569	141	flavodoxin; Provisional	94.9
TIGR01019	286	sucCoAalpha succinyl-CoA synthetase, alpha subunit	94.88
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	94.87
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.86
KOG1014|consensus	312		94.85
PRK09496	453	trkA potassium transporter peripheral membrane com	94.84
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	94.8
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.74
PTZ00082	321	L-lactate dehydrogenase; Provisional	94.69
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.69
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	94.69
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	94.64
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	94.63
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	94.58
PRK04207	341	glyceraldehyde-3-phosphate dehydrogenase; Provisio	94.56
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.48
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	94.47
PRK10206	344	putative oxidoreductase; Provisional	94.46
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.43
CHL00194	317	ycf39 Ycf39; Provisional	94.41
PRK05568	142	flavodoxin; Provisional	94.37
PRK07890	258	short chain dehydrogenase; Provisional	94.37
PLN02383	344	aspartate semialdehyde dehydrogenase	94.31
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	94.3
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	94.28
PRK01710	458	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.21
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	94.16
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	94.14
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.08
PRK01390	460	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.08
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.07
PRK06139	330	short chain dehydrogenase; Provisional	94.05
PRK08862	227	short chain dehydrogenase; Provisional	94.05
PRK05867	253	short chain dehydrogenase; Provisional	93.97
PRK06182	273	short chain dehydrogenase; Validated	93.96
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	93.94
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	93.93
PRK07478	254	short chain dehydrogenase; Provisional	93.82
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.72
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	93.72
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	93.72
PRK08265	261	short chain dehydrogenase; Provisional	93.71
KOG1502|consensus	327		93.71
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	93.69
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.67
PRK06180	277	short chain dehydrogenase; Provisional	93.62
PRK11579	346	putative oxidoreductase; Provisional	93.57
PRK08643	256	acetoin reductase; Validated	93.54
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	93.53
PLN02780	320	ketoreductase/ oxidoreductase	93.5
PRK07825	273	short chain dehydrogenase; Provisional	93.48
PRK07109	334	short chain dehydrogenase; Provisional	93.47
PRK05866	293	short chain dehydrogenase; Provisional	93.43
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.38
TIGR01082	448	murC UDP-N-acetylmuramate--alanine ligase. UDP-N-a	93.35
PRK06124	256	gluconate 5-dehydrogenase; Provisional	93.34
PRK05693	274	short chain dehydrogenase; Provisional	93.34
PRK08340	259	glucose-1-dehydrogenase; Provisional	93.32
PRK06349	426	homoserine dehydrogenase; Provisional	93.31
PRK07814	263	short chain dehydrogenase; Provisional	93.26
PRK07067	257	sorbitol dehydrogenase; Provisional	93.2
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	93.19
PLN03209	576	translocon at the inner envelope of chloroplast su	93.17
TIGR02415	254	23BDH acetoin reductases. One member of this famil	93.12
PRK07454	241	short chain dehydrogenase; Provisional	93.05
PRK05876	275	short chain dehydrogenase; Provisional	92.98
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	92.96
PRK08213	259	gluconate 5-dehydrogenase; Provisional	92.96
PRK07063	260	short chain dehydrogenase; Provisional	92.9
PRK06756	148	flavodoxin; Provisional	92.87
PRK07024	257	short chain dehydrogenase; Provisional	92.81
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	92.8
PRK12939	250	short chain dehydrogenase; Provisional	92.79
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	92.72
PRK12828	239	short chain dehydrogenase; Provisional	92.72
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.69
PRK06720	169	hypothetical protein; Provisional	92.65
PRK08589	272	short chain dehydrogenase; Validated	92.63
PRK07774	250	short chain dehydrogenase; Provisional	92.6
PRK07523	255	gluconate 5-dehydrogenase; Provisional	92.56
PRK03803	448	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	92.55
PRK05854	313	short chain dehydrogenase; Provisional	92.46
PRK08085	254	gluconate 5-dehydrogenase; Provisional	92.46
PRK10569	191	NAD(P)H-dependent FMN reductase; Provisional	92.45
KOG4230|consensus	935		92.43
PRK06196	315	oxidoreductase; Provisional	92.39
PRK00421	461	murC UDP-N-acetylmuramate--L-alanine ligase; Provi	92.33
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	92.3
PRK06179	270	short chain dehydrogenase; Provisional	92.29
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	92.26
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	92.24
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	92.23
PRK07062	265	short chain dehydrogenase; Provisional	92.23
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	92.21
PRK06057	255	short chain dehydrogenase; Provisional	92.2
PF04016	147	DUF364: Domain of unknown function (DUF364); Inter	92.1
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	92.1
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	92.1
PRK07326	237	short chain dehydrogenase; Provisional	92.02
PRK08277	278	D-mannonate oxidoreductase; Provisional	92.01
PRK06703	151	flavodoxin; Provisional	91.87
PRK10538	248	malonic semialdehyde reductase; Provisional	91.86
PRK07074	257	short chain dehydrogenase; Provisional	91.85
TIGR01087	433	murD UDP-N-acetylmuramoylalanine--D-glutamate liga	91.84
PRK07035	252	short chain dehydrogenase; Provisional	91.83
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	91.79
PRK06194	287	hypothetical protein; Provisional	91.77
KOG1370|consensus	434		91.76
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	91.75
PRK06172	253	short chain dehydrogenase; Provisional	91.67
PRK07677	252	short chain dehydrogenase; Provisional	91.64
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	91.63
PRK00676	338	hemA glutamyl-tRNA reductase; Validated	91.6
PRK05993	277	short chain dehydrogenase; Provisional	91.55
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	91.51
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	91.49
KOG1201|consensus	300		91.47
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	91.43
PRK08267	260	short chain dehydrogenase; Provisional	91.42
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	91.39
PF03848	192	TehB: Tellurite resistance protein TehB; InterPro:	91.38
PRK07097	265	gluconate 5-dehydrogenase; Provisional	91.29
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	91.29
PRK09186	256	flagellin modification protein A; Provisional	91.28
PRK12829	264	short chain dehydrogenase; Provisional	91.26
PRK10537	393	voltage-gated potassium channel; Provisional	91.21
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	91.19
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	91.18
PRK05872	296	short chain dehydrogenase; Provisional	91.14
PRK05086	312	malate dehydrogenase; Provisional	90.92
PLN02253	280	xanthoxin dehydrogenase	90.91
COG3268	382	Uncharacterized conserved protein [Function unknow	90.84
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	90.79
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	90.76
PRK06482	276	short chain dehydrogenase; Provisional	90.74
PRK11921	394	metallo-beta-lactamase/flavodoxin domain-containin	90.74
PRK08339	263	short chain dehydrogenase; Provisional	90.67
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	90.67
PRK09242	257	tropinone reductase; Provisional	90.67
PF02056	183	Glyco_hydro_4: Family 4 glycosyl hydrolase; InterP	90.59
PRK06270	341	homoserine dehydrogenase; Provisional	90.57
PRK06719	157	precorrin-2 dehydrogenase; Validated	90.57
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	90.56
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	90.56
PRK06138	252	short chain dehydrogenase; Provisional	90.55
PRK06949	258	short chain dehydrogenase; Provisional	90.48
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	90.48
COG2910	211	Putative NADH-flavin reductase [General function p	90.48
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	90.44
PRK05855	582	short chain dehydrogenase; Validated	90.42
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	90.36
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	90.25
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	90.25
PRK07453	322	protochlorophyllide oxidoreductase; Validated	90.22
PRK08263	275	short chain dehydrogenase; Provisional	90.17
KOG0725|consensus	270		90.16
PRK06114	254	short chain dehydrogenase; Provisional	90.14
PRK05650	270	short chain dehydrogenase; Provisional	90.12
PRK06398	258	aldose dehydrogenase; Validated	90.08
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	90.02
PRK07856	252	short chain dehydrogenase; Provisional	90.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	90.0
PLN00112	444	malate dehydrogenase (NADP); Provisional	89.93
PRK06500	249	short chain dehydrogenase; Provisional	89.82
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	89.79
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	89.78
PRK06484	520	short chain dehydrogenase; Validated	89.74
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	89.73
PRK06197	306	short chain dehydrogenase; Provisional	89.7
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	89.62
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	89.62
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	89.62
PRK07832	272	short chain dehydrogenase; Provisional	89.61
PRK08251	248	short chain dehydrogenase; Provisional	89.52
PRK12743	256	oxidoreductase; Provisional	89.5
PRK05717	255	oxidoreductase; Validated	89.48
PRK08628	258	short chain dehydrogenase; Provisional	89.47
PRK06483	236	dihydromonapterin reductase; Provisional	89.38
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	89.38
PRK06484	520	short chain dehydrogenase; Validated	89.33
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	89.33
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	89.27
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	89.23
PLN02650	351	dihydroflavonol-4-reductase	89.15
PRK13255	218	thiopurine S-methyltransferase; Reviewed	88.98
PRK05875	276	short chain dehydrogenase; Provisional	88.97
PRK06841	255	short chain dehydrogenase; Provisional	88.97
PRK07831	262	short chain dehydrogenase; Provisional	88.93
TIGR03567	171	FMN_reduc_SsuE FMN reductase, SsuE family. Members	88.85
PLN00015	308	protochlorophyllide reductase	88.8
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	88.76
PRK07576	264	short chain dehydrogenase; Provisional	88.76
PRK06914	280	short chain dehydrogenase; Provisional	88.74
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	88.73
PRK08226	263	short chain dehydrogenase; Provisional	88.66
PRK05884	223	short chain dehydrogenase; Provisional	88.62
PRK06101	240	short chain dehydrogenase; Provisional	88.6
PRK07775	274	short chain dehydrogenase; Provisional	88.45
PRK05472	213	redox-sensing transcriptional repressor Rex; Provi	88.43
PRK05452	479	anaerobic nitric oxide reductase flavorubredoxin;	88.38
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	88.37
PRK15076	431	alpha-galactosidase; Provisional	88.34
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	88.33
PRK07069	251	short chain dehydrogenase; Validated	88.32
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	88.24
PRK06181	263	short chain dehydrogenase; Provisional	88.23
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	88.17
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	88.16
PLN02686	367	cinnamoyl-CoA reductase	88.09
PRK08309	177	short chain dehydrogenase; Provisional	88.05
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	88.04
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	87.99
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	87.91
PF10728	132	DUF2520: Domain of unknown function (DUF2520); Int	87.84
PRK06947	248	glucose-1-dehydrogenase; Provisional	87.81
TIGR01081	448	mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl	87.77

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=100.00  E-value=1.7e-39  Score=245.21  Aligned_cols=183  Identities=48%  Similarity=0.745  Sum_probs=177.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh-HHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA-SQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||.+||.+|.+.||+|++|||++++ .+.+.+.|.....++.|+++.+|+||+++|++.+++.++++..++.+.+++|++
T Consensus        11 MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~~~~~~~G~i   90 (286)
T COG2084          11 MGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGLLEGLKPGAI   90 (286)
T ss_pred             hhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccchhhcCCCCCE
Confidence            8999999999999999999999999 666777799999999999999999999999999999999998899999999999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHH
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVA  159 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~  159 (183)
                      +||+||..|...+.+.+.++++|.+|+|+|++|++..+..|+++++++|+++.+++++++|+.+|.+++++|+.|+|+.+
T Consensus        91 ~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~~A~~GtLtimvGG~~~~f~r~~pvl~~~g~~i~~~G~~G~G~~~  170 (286)
T COG2084          91 VIDMSTISPETARELAAALAAKGLEFLDAPVSGGVPGAAAGTLTIMVGGDAEAFERAKPVLEAMGKNIVHVGPVGAGQAA  170 (286)
T ss_pred             EEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCchhhhhCceEEEeCCCHHHHHHHHHHHHHhcCceEEECCCCchHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccC
Q psy755          160 KLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       160 k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      |+++|.+...+++.++|++.+++|
T Consensus       171 Kl~nn~l~~~~~~a~aEAl~la~k  194 (286)
T COG2084         171 KLANNILLAGNIAALAEALALAEK  194 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999876

>KOG0409|consensus

Probab=100.00  E-value=1.5e-35  Score=220.75  Aligned_cols=183  Identities=45%  Similarity=0.745  Sum_probs=178.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+|+.+|.++||+|++|||+.++.+.+.+.|....+++.|+++.||+||.++|++.+.+.+++|..++...+++++..
T Consensus        46 MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~v~~v~~g~~Gvl~g~~~g~~~  125 (327)
T KOG0409|consen   46 MGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKDVKDVLLGKSGVLSGIRPGKKA  125 (327)
T ss_pred             chHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHhhHHHhcCCCcceeeccCCCce
Confidence            89999999999999999999999999999999999999999999999999999999999999999988899989998887


Q ss_pred             -EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHH
Q psy755           81 -IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVA  159 (183)
Q Consensus        81 -id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~  159 (183)
                       ||.|++.|..+.++.+.+..++..|+|+|++|+...++.|+++|+.+|+++.+++..++|+.+|++++++|..|.|+.+
T Consensus       126 ~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVSGg~~~A~~G~LtimagGde~~~~~~~~~~~~mGk~~~~~G~~GnG~~~  205 (327)
T KOG0409|consen  126 TVDMSTIDPDTSLEIAKAISNKGGRFVDAPVSGGVKGAEEGTLTIMAGGDEALFEAASPVFKLMGKNVVFLGGVGNGQAA  205 (327)
T ss_pred             EEeccccCHHHHHHHHHHHHhCCCeEEeccccCCchhhhcCeEEEEecCcHHHHHHHHHHHHHhcceEEEecccCchHHH
Confidence             8999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccC
Q psy755          160 KLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       160 k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      |+++|.+.+..|..++|++.+++|
T Consensus       206 Kl~nnm~~g~~M~g~aEal~la~r  229 (327)
T KOG0409|consen  206 KLCNNMLLGSSMVGLAEALALADR  229 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999875

>PRK09287 6-phosphogluconate dehydrogenase; Validated

Probab=100.00  E-value=1.7e-35  Score=238.37  Aligned_cols=178  Identities=26%  Similarity=0.364  Sum_probs=169.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-----CCcccCCHHHHhcc---CCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-----GANMALSLSTLASG---AEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~---adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||..||++|+++||+|.+|||++++.+.+.+.     ++..+++++++++.   +|+||+++|++.+++.++   +++.+
T Consensus         1 MG~~mA~nL~~~G~~V~v~nrt~~~~~~l~~~~g~~~g~~~~~s~~e~v~~l~~~~~Ii~mv~~g~~v~~Vi---~~l~~   77 (459)
T PRK09287          1 MGKNLALNIASHGYTVAVYNRTPEKTDEFLAEEGKGKKIVPAYTLEEFVASLEKPRKILLMVKAGAPVDAVI---EQLLP   77 (459)
T ss_pred             CcHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhCCCCCeEeeCCHHHHHhhCCCCCEEEEECCCchHHHHHH---HHHHh
Confidence            99999999999999999999999999999874     47778899998875   899999999999999998   78999


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCe-----
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNI-----  147 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~-----  147 (183)
                      .+.+|++|||+||+.+.+.....+.+.++|++|+++|++|++..+..|+ .++++|+++++++++++|+.++.++     
T Consensus        78 ~l~~GdiiID~gn~~~~~t~~~~~~l~~~Gi~fvdapVSGG~~gA~~G~-siM~GG~~~a~~~~~piL~~ia~~~~~g~~  156 (459)
T PRK09287         78 LLEKGDIIIDGGNSNYKDTIRREKELAEKGIHFIGMGVSGGEEGALHGP-SIMPGGQKEAYELVAPILEKIAAKVEDGEP  156 (459)
T ss_pred             cCCCCCEEEECCCCCHHHHHHHHHHHHhcCCeEEecCCCCCHHHHhcCC-EEEEeCCHHHHHHHHHHHHHHhhhhcCCCC
Confidence            9999999999999999999999999999999999999999999999998 9999999999999999999999876     


Q ss_pred             --EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          148 --VHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       148 --~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                        .++|+.|+|+++||+||.+++..+++++|++.+++
T Consensus       157 c~~~vG~~GaGh~vKmvhN~ie~~~mq~iaEa~~l~~  193 (459)
T PRK09287        157 CVTYIGPDGAGHYVKMVHNGIEYGDMQLIAEAYDLLK  193 (459)
T ss_pred             ceeeeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              89999999999999999999999999999999876

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=100.00  E-value=3.5e-35  Score=237.67  Aligned_cols=179  Identities=21%  Similarity=0.297  Sum_probs=167.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----CCc---ccCCHHHHhcc---CCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE----GAN---MALSLSTLASG---AEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~~~---adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      ||.+||++|+++||+|++|||++++.+.+.+.    |..   .++++.++++.   +|+||+++|++.+++.++   +++
T Consensus        17 MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV~~Vi---~gl   93 (493)
T PLN02350         17 MGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPVDQTI---KAL   93 (493)
T ss_pred             HHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHHHHHH---HHH
Confidence            89999999999999999999999999988763    533   57789999876   999999999999999998   788


Q ss_pred             cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCC----
Q psy755           71 LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN----  146 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~----  146 (183)
                      .+.+.+|++|||+||+.|.+...+.+.+.++|++|+++||+|++..+..|+ +++++|+++++++++++|+.++.+    
T Consensus        94 ~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fldapVSGG~~gA~~G~-~im~GG~~~a~~~v~pvL~~ia~k~~~~  172 (493)
T PLN02350         94 SEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLGMGVSGGEEGARNGP-SLMPGGSFEAYKNIEDILEKVAAQVDDG  172 (493)
T ss_pred             HhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeCCCcCCHHHhcCCC-eEEecCCHHHHHHHHHHHHHHhhhcCCC
Confidence            899999999999999999999999999999999999999999999999998 899999999999999999999964    


Q ss_pred             --eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          147 --IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       147 --~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                        ++++|+.|+|+++||++|.+++..+++++|++.++++
T Consensus       173 ~~v~~vG~~GaG~~vKlv~N~i~~~~m~~iaEA~~l~~~  211 (493)
T PLN02350        173 PCVTYIGPGGAGNFVKMVHNGIEYGDMQLISEAYDVLKS  211 (493)
T ss_pred             CcEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence              8899999999999999999999999999999998864

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=100.00  E-value=1.5e-34  Score=222.64  Aligned_cols=183  Identities=52%  Similarity=0.831  Sum_probs=174.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||++|.++||+|++|||++++.+.+.+.|....+++.++++++|+||+|+|++++++.++++.+++.+.+++|+++
T Consensus         7 mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~~~~g~~v   86 (288)
T TIGR01692         7 MGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPKVAKGSLL   86 (288)
T ss_pred             hHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhcCCCCCEE
Confidence            89999999999999999999999999999988888888999999999999999999888999987767888888999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      ||+|+..|...+.+.+.+.++|++|+++|++|++..+..+++.++++|+++.+++++++|+.+|.+++++|+.|+|+++|
T Consensus        87 id~st~~p~~~~~~~~~~~~~g~~~vdaPv~Gg~~~a~~g~l~~~~gg~~~~~~~~~~~l~~~g~~~~~~g~~g~g~~~K  166 (288)
T TIGR01692        87 IDCSTIDPDSARKLAELAAAHGAVFMDAPVSGGVGGARAGTLTFMVGGVAEEFAAAEPVLGPMGRNIVHCGDHGAGQAAK  166 (288)
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCcEEECCCCCCHHHHhhCcEEEEECCCHHHHHHHHHHHHHhcCCeEeeCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|.+.+.++..++|++.+++|
T Consensus       167 l~~n~~~~~~~~~~~Ea~~la~~  189 (288)
T TIGR01692       167 ICNNMLLGISMIGTAEAMALGEK  189 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999875

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=100.00  E-value=4.9e-34  Score=219.61  Aligned_cols=182  Identities=31%  Similarity=0.536  Sum_probs=170.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||++|.+.||+|++|||++. .+++.+.|.....++.+++++||+||+++|++.+++.++++..++.+.+.+|++|
T Consensus        11 MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~~~~~~g~iv   89 (292)
T PRK15059         11 MGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCTKASLKGKTI   89 (292)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchhccCCCCCEE
Confidence            899999999999999999999985 5677777887888999999999999999999989999987655677778899999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+|+..|.+.+.+.+.+.++|.+|+++|+++++..+..|++.++++|+++.+++++++|+.+|.+++++|+.|+|+.+|
T Consensus        90 vd~sT~~p~~~~~~~~~~~~~G~~~vdaPVsGg~~~a~~g~l~~~~gG~~~~~~~~~p~l~~~g~~~~~~G~~G~g~~~K  169 (292)
T PRK15059         90 VDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCK  169 (292)
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCCEEEecCCCCHHHHhcCcEEEEEcCCHHHHHHHHHHHHHHcCCcEEeCCccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|++...++.+++|++.+++|
T Consensus       170 l~~N~l~~~~~~a~~Ea~~la~~  192 (292)
T PRK15059        170 VANQIIVALNIEAVSEALLFASK  192 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999875

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=217.45  Aligned_cols=183  Identities=36%  Similarity=0.507  Sum_probs=173.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||.+|+++|++|++|||++++.+.+.+.|.....++.+++++||+||+++|+...++.++++..++.+.+++|+++
T Consensus        12 mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~i~~~l~~g~lv   91 (296)
T PRK15461         12 MGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENGVCEGLSRDALV   91 (296)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcccHhhcCCCCCEE
Confidence            89999999999999999999999999999888888888999999999999999999888999987656677788899999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+|+..|...+.+.+.+.++|+.|+++|+++++..+..|+++++.+|+++.+++++++|+.+|.+++++|+.|+|+.+|
T Consensus        92 id~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~~a~~g~l~~~~gg~~~~~~~~~p~l~~~g~~~~~~g~~G~g~~~K  171 (296)
T PRK15461         92 IDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSDNAITGTLLLLAGGTAEQVERATPILMAMGNELINAGGPGMGIRVK  171 (296)
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHHHHHhCcEEEEECCCHHHHHHHHHHHHHHcCCeEeeCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|++...++..++|++.+++|
T Consensus       172 l~~N~~~~~~~~~~~Ea~~l~~~  194 (296)
T PRK15461        172 LINNYMSIALNALSAEAAVLCEA  194 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999874

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-34  Score=229.07  Aligned_cols=178  Identities=24%  Similarity=0.345  Sum_probs=167.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----C--CcccCCHHHHhc---cCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE----G--ANMALSLSTLAS---GAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~---~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||.+||++|+++||+|++|||++++.+.+.+.    |  +..+++++++++   ++|+||+++|+++.++.++   +++.
T Consensus        12 MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v~~vi---~~l~   88 (470)
T PTZ00142         12 MGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAVDETI---DNLL   88 (470)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHHHHHH---HHHH
Confidence            89999999999999999999999999888764    4  335778999886   4899999999999999998   8899


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCC-----
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN-----  146 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~-----  146 (183)
                      +.+.+|++|||+|++.+.+.....+.+.++|++|+++|++|++..++.|+ +++++|+++++++++++|+.++.+     
T Consensus        89 ~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fldapVSGG~~gA~~G~-~lm~GG~~~a~~~~~piL~~ia~~~~~~~  167 (470)
T PTZ00142         89 PLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYLGMGVSGGEEGARYGP-SLMPGGNKEAYDHVKDILEKCSAKVGDSP  167 (470)
T ss_pred             hhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEcCCCCCCHHHHhcCC-EEEEeCCHHHHHHHHHHHHHHhhhcCCCC
Confidence            99999999999999999999999999999999999999999999999998 899999999999999999999987     


Q ss_pred             -eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          147 -IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       147 -~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                       +.++|+.|+|+++||+||.++++.+++++|++.+++
T Consensus       168 ~~~~~G~~GaGh~vKmvhN~ie~~~m~~iaEa~~l~~  204 (470)
T PTZ00142        168 CVTYVGPGSSGHYVKMVHNGIEYGDMQLISESYKLMK  204 (470)
T ss_pred             eEEEECCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence             789999999999999999999999999999999985

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=100.00  E-value=7.8e-33  Score=213.99  Aligned_cols=179  Identities=30%  Similarity=0.429  Sum_probs=167.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhcc---CCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASG---AEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||.+||++|.+.|++|++|||++++.+.+.+.|....+++++++++   +|+||+++|++..++.++   +++.+.+++|
T Consensus        11 mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~---~~i~~~l~~g   87 (299)
T PRK12490         11 MGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVI---KDLYPLLSPG   87 (299)
T ss_pred             HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHH---HHHhccCCCC
Confidence            7999999999999999999999999999888888888899998776   699999999987888888   7788889999


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcC---CeEEeCCcc
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGR---NIVHCGDSG  154 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~---~~~~~g~~g  154 (183)
                      ++|||+|++.|.+...+.+.+.++|++|+++|++|++..+..|. +++++|+++++++++++|+.+|.   +++++|+.|
T Consensus        88 ~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~~a~~g~-~~~~gG~~~~~~~~~~~l~~~~~~~~~~~~~G~~g  166 (299)
T PRK12490         88 DIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVWGLRNGY-CLMVGGDKEIYDRLEPVFKALAPEGPGYVHAGPVG  166 (299)
T ss_pred             CEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHHHHhcCC-eEEecCCHHHHHHHHHHHHHhcCcCCcEEEECCcC
Confidence            99999999999999999999999999999999999999999997 79999999999999999999997   789999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          155 NGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       155 ~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +|+.+|+++|++...++++++|++.+++|
T Consensus       167 ~a~~~Kl~~n~~~~~~~~~~aEa~~l~~~  195 (299)
T PRK12490        167 SGHFLKMVHNGIEYGMMQAYAEGLELLDK  195 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999875

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=100.00  E-value=6.1e-33  Score=224.41  Aligned_cols=178  Identities=24%  Similarity=0.348  Sum_probs=164.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc---C--CcccCCHHHHhc---cCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE---G--ANMALSLSTLAS---GAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~---g--~~~~~~~~~~~~---~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||.+||++|+++||+|++|||++++.+.+.+.   |  +...+++.++++   .+|+||+++|+++.++.++   +++.+
T Consensus        10 MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~Vi---~~l~~   86 (467)
T TIGR00873        10 MGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDAVI---NQLLP   86 (467)
T ss_pred             HHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHHHH---HHHHh
Confidence            89999999999999999999999999998875   2  455667888764   6899999999999999998   78999


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCC------
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN------  146 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~------  146 (183)
                      .+++|++|||+|++.+.+.....+.+.++|++|+++|++|++..+..|. +++++|+++++++++++|+.++.+      
T Consensus        87 ~L~~g~iIID~gns~~~~t~~~~~~l~~~gi~fvdapVsGG~~gA~~G~-~im~GG~~~a~~~~~p~L~~ia~~~~~~~~  165 (467)
T TIGR00873        87 LLEKGDIIIDGGNSHYPDTERRYKELKAKGILFVGSGVSGGEEGARKGP-SIMPGGSAEAWPLVAPIFQKIAAKVDGEPC  165 (467)
T ss_pred             hCCCCCEEEECCCcCHHHHHHHHHHHHhcCCEEEcCCCCCCHHHHhcCC-cCCCCCCHHHHHHHHHHHHHHhhhcCCCCc
Confidence            9999999999999999999888999999999999999999999999998 899999999999999999999987      


Q ss_pred             eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          147 IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       147 ~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +.++|+.|+|+++||+||.+++..+++++|++.+++
T Consensus       166 ~~~~G~~GsG~~vKmvhN~i~~~~m~~~aEa~~ll~  201 (467)
T TIGR00873       166 CTWIGPDGAGHYVKMVHNGIEYGDMQLICEAYDILK  201 (467)
T ss_pred             eEEECCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999863

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=100.00  E-value=1.6e-31  Score=206.17  Aligned_cols=183  Identities=36%  Similarity=0.611  Sum_probs=170.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||..|++.|++|++|||++++.+++.+.|....+++.+++++||+||+++|+...++.++++.+++.+.++++++|
T Consensus        10 mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~~~~~~~g~ii   89 (291)
T TIGR01505        10 MGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGIIEGAKPGKTL   89 (291)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchHhhcCCCCCEE
Confidence            89999999999999999999999999999888887788899999999999999999888888876645567778899999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+|+..|.+.+.+.+.++++|.+|+++|+++++..+..+...++++|+++.+++++++++.+|.+++++|+.|+|+.+|
T Consensus        90 vd~st~~~~~~~~l~~~l~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~lg~~~~~~g~~g~a~~~K  169 (291)
T TIGR01505        90 VDMSSISPIESKRFAKAVKEKGIDYLDAPVSGGEIGAIEGTLSIMVGGDQAVFDRVKPLFEALGKNIVLVGGNGDGQTCK  169 (291)
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCCEEecCCCCCHHHHhcCCEEEEecCCHHHHHHHHHHHHHhcCCeEEeCCCCHHHHHH
Confidence            99999999999999999999999999999999998888898899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|.+...++++++|++.++++
T Consensus       170 l~~n~~~~~~~~~~~Ea~~l~~~  192 (291)
T TIGR01505       170 VANQIIVALNIEAVSEALVFASK  192 (291)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999874

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=100.00  E-value=1.1e-31  Score=207.88  Aligned_cols=179  Identities=34%  Similarity=0.495  Sum_probs=167.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhcc---CCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASG---AEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||.+||++|+++|++|++|||++++.+.+.+.|....+++.++++.   +|+||+++|+...++.++   +++.+.+++|
T Consensus        11 MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~---~~l~~~l~~g   87 (301)
T PRK09599         11 MGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATI---DELAPLLSPG   87 (301)
T ss_pred             HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHH---HHHHhhCCCC
Confidence            8999999999999999999999999999988888888899988875   699999999987788887   7788889999


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcC----CeEEeCCc
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGR----NIVHCGDS  153 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~----~~~~~g~~  153 (183)
                      +++||+|+..|.....+.+.+.++|++|+++|++|++..+..|. +++++|+++.+++++++|+.++.    +++++|+.
T Consensus        88 ~ivid~st~~~~~~~~~~~~~~~~g~~~~dapvsG~~~~a~~g~-~~~~gG~~~~~~~~~~~l~~~~~~~~~~~~~~G~~  166 (301)
T PRK09599         88 DIVIDGGNSYYKDDIRRAELLAEKGIHFVDVGTSGGVWGLERGY-CLMIGGDKEAVERLEPIFKALAPRAEDGYLHAGPV  166 (301)
T ss_pred             CEEEeCCCCChhHHHHHHHHHHHcCCEEEeCCCCcCHHHHhcCC-eEEecCCHHHHHHHHHHHHHHcccccCCeEeECCC
Confidence            99999999999999999999999999999999999999999895 89999999999999999999998    78999999


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          154 GNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       154 g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      |+|+.+|+++|.+....++.++|++.++++
T Consensus       167 G~g~~~Kl~~n~l~~~~~~~~aEa~~l~~~  196 (301)
T PRK09599        167 GAGHFVKMVHNGIEYGMMQAYAEGFELLEA  196 (301)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999864

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=100.00  E-value=2.2e-31  Score=205.90  Aligned_cols=183  Identities=39%  Similarity=0.668  Sum_probs=171.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..+|..|++.|++|++|||++++.+.+.+.|....+++.+++++||+||+++|++..++.++++.+++.+.+++|++|
T Consensus        13 mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~~~~~~~~g~ii   92 (296)
T PRK11559         13 MGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVV   92 (296)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcchHhhcCCCCcEE
Confidence            79999999999999999999999999988888887788899999999999999999888888887655677888999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+|+..|...+.+.+.+..+|++|+++|+++++..+..+...++++|+++.++.++++++.+|.+++++|+.|+|+.+|
T Consensus        93 id~st~~~~~~~~l~~~~~~~g~~~~d~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~~l~~~~~~~~~~g~~g~a~~~K  172 (296)
T PRK11559         93 IDMSSIAPLASREIAAALKAKGIEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTK  172 (296)
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCcEEEcCCCCCHHHHhhCcEEEEECCCHHHHHHHHHHHHHhcCCeEEeCCcCHHHHHH
Confidence            99999999999999999999999999999999999888898899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|.+...++++++|++.+|++
T Consensus       173 l~~n~~~~~~~~~~~Ea~~l~~~  195 (296)
T PRK11559        173 LANQVIVALNIAAMSEALVLATK  195 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999874

>PLN02858 fructose-bisphosphate aldolase

Probab=100.00  E-value=1.1e-31  Score=238.79  Aligned_cols=183  Identities=27%  Similarity=0.437  Sum_probs=175.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..||++|+++||+|++|||++++.+++.+.|...++++.+++++||+||+++|++.+++.++++.+++.+.+.+|+++
T Consensus        15 MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~~g~~~~l~~g~ii   94 (1378)
T PLN02858         15 LSFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGDEGAAKGLQKGAVI   94 (1378)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhchhhHHhcCCCcCEE
Confidence            89999999999999999999999999999999998899999999999999999999999999998877888889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC--CcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEE-eCCcchHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ--ITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVH-CGDSGNGQ  157 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~-~g~~g~a~  157 (183)
                      ||+||..|...+.+.+.+.++|  +.|+++|++|++..+..|+++++++|+++.+++++++|+.+|.++++ +|+.|+|+
T Consensus        95 vd~STi~p~~~~~la~~l~~~g~~~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~~~g~~i~~~~G~~G~g~  174 (1378)
T PLN02858         95 LIRSTILPLQLQKLEKKLTERKEQIFLVDAYVSKGMSDLLNGKLMIIASGRSDAITRAQPFLSAMCQKLYTFEGEIGAGS  174 (1378)
T ss_pred             EECCCCCHHHHHHHHHHHHhcCCceEEEEccCcCCHHHHhcCCeEEEEcCCHHHHHHHHHHHHHhcCceEEecCCCCHhH
Confidence            9999999999999999999999  89999999999999999999999999999999999999999998876 59999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          158 VAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       158 ~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      .+|+++|++.+.++..++|++.+++|
T Consensus       175 ~~KL~nN~l~~~~~~a~aEAl~la~~  200 (1378)
T PLN02858        175 KVKMVNELLEGIHLVASAEAMALGVR  200 (1378)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999875

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.98  E-value=5.9e-31  Score=190.26  Aligned_cols=178  Identities=34%  Similarity=0.509  Sum_probs=166.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh---ccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA---SGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||..|.++|.+.||+|++||+|++.++.+...++...+++.+++   ....+|++.||..+.+..++   +++.+.|.+|
T Consensus        11 MG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi---~~la~~L~~G   87 (300)
T COG1023          11 MGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVI---DDLAPLLSAG   87 (300)
T ss_pred             hhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHH---HHHHhhcCCC
Confidence            89999999999999999999999999999999988888888775   47899999999998899998   9999999999


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcC---CeEEeCCcc
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGR---NIVHCGDSG  154 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~---~~~~~g~~g  154 (183)
                      .+|||..++...+.....+.+.++|+||+|+.-+|++..++.|- .++++|++++++.+.++|+.+..   -+-++||.|
T Consensus        88 DivIDGGNS~y~Ds~rr~~~l~~kgi~flD~GTSGG~~G~~~G~-~lMiGG~~~a~~~~~pif~~lA~ge~Gyl~~Gp~G  166 (300)
T COG1023          88 DIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSGGVWGAERGY-CLMIGGDEEAVERLEPIFKALAPGEDGYLYCGPSG  166 (300)
T ss_pred             CEEEECCccchHHHHHHHHHHHhcCCeEEeccCCCCchhhhcCc-eEEecCcHHHHHHHHHHHHhhCcCcCccccccCCC
Confidence            99999999999999999999999999999999999999999885 89999999999999999999976   467899999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          155 NGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       155 ~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      ++|++||+||.+++..|++++|++.+-+
T Consensus       167 sGHfvKMVHNGIEYGmM~a~aEGfelL~  194 (300)
T COG1023         167 SGHFVKMVHNGIEYGMMQAIAEGFELLK  194 (300)
T ss_pred             cchhHHHHhccHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999998754

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=99.98  E-value=1.1e-30  Score=201.85  Aligned_cols=178  Identities=27%  Similarity=0.444  Sum_probs=164.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh---ccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA---SGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||.+||++|.++|++|.+|||++++.+.+.+.+.....++.++.   ..+|+||+++|+. .++.++   +++.+.+++|
T Consensus        11 mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~---~~l~~~l~~g   86 (298)
T TIGR00872        11 MGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG-IVDAVL---EELAPTLEKG   86 (298)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch-HHHHHH---HHHHhhCCCC
Confidence            89999999999999999999999999999888876666776654   4689999999997 888888   7889999999


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcC---CeEEeCCcc
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGR---NIVHCGDSG  154 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~---~~~~~g~~g  154 (183)
                      ++|||+|+..|.+.....+.+.++|++|+++|++|++..+..| ..++++|+++.++.++++|+.++.   ..+++|+.|
T Consensus        87 ~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsGg~~~a~~G-~~~~~gG~~~~~~~~~~~l~~~~~~~~~~~~~G~~G  165 (298)
T TIGR00872        87 DIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSGGVWGRERG-YCFMIGGDGEAFARAEPLFADVAPEEQGYLYCGPCG  165 (298)
T ss_pred             CEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCCCHHHHhcC-CeeeeCCCHHHHHHHHHHHHHhcCcCCCEEEECCcc
Confidence            9999999999999999999999999999999999999999989 588999999999999999999986   578999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          155 NGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       155 ~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++++|+++|.+....++.++|++.++++
T Consensus       166 ~~~~~K~~~n~l~~~~~~~~aE~~~l~~~  194 (298)
T TIGR00872       166 SGHFVKMVHNGIEYGMMAAIAEGFEILRN  194 (298)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999764

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=99.97  E-value=1.7e-31  Score=189.49  Aligned_cols=151  Identities=41%  Similarity=0.684  Sum_probs=137.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..||++|.++||+|++|||++++.+++.+.|...++++.|+++++|+||+++|++.+++.++++.. +.+.+.+|+++
T Consensus        12 mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~-i~~~l~~g~ii   90 (163)
T PF03446_consen   12 MGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGEN-ILAGLRPGKII   90 (163)
T ss_dssp             HHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTT-HGGGS-TTEEE
T ss_pred             HHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhH-HhhccccceEE
Confidence            89999999999999999999999999999999999999999999999999999999999999996644 89999999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeE-EeCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIV-HCGD  152 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~-~~g~  152 (183)
                      ||+|+..|...+++.+.+.++|++|+++|++|++..+..++++++++|+++.+++++++|+.+|.+++ ++||
T Consensus        91 id~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~~~a~~g~l~~~~gG~~~~~~~~~~~l~~~~~~v~~~~G~  163 (163)
T PF03446_consen   91 IDMSTISPETSRELAERLAAKGVRYVDAPVSGGPPGAEEGTLTIMVGGDEEAFERVRPLLEAMGKNVYHYVGP  163 (163)
T ss_dssp             EE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHHHHHHHTTEEEEEES-HHHHHHHHHHHHHHEEEEEEE-ES
T ss_pred             EecCCcchhhhhhhhhhhhhccceeeeeeeecccccccccceEEEccCCHHHHHHHHHHHHHHhCCceeeeCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999988 4575

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PLN02858 fructose-bisphosphate aldolase

Probab=99.97  E-value=5.1e-30  Score=228.12  Aligned_cols=183  Identities=30%  Similarity=0.432  Sum_probs=172.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||.+|+++||+|++|||++++.+.+.+.|....+++.+++++||+||+|+|++++++.++++..++.+.+.+|+++
T Consensus       335 MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~g~~~~l~~g~iv  414 (1378)
T PLN02858        335 MGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDLGAVSALPAGASI  414 (1378)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchhhHHhcCCCCCEE
Confidence            89999999999999999999999999999888887788999999999999999999999999998766778888999999


Q ss_pred             EeccCCCchhHHHHHHHHHh--cCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEE-eCCcchHH
Q psy755           81 IDSSTVDPQVPQTLSNLARE--KQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVH-CGDSGNGQ  157 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~-~g~~g~a~  157 (183)
                      ||+||..|...+.+.+.+.+  +|++|+++|++|++..+..|+++++++|+++.+++++++|+.+|.++++ .|+.|+|+
T Consensus       415 Vd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~~A~~G~L~imvgG~~~~~~~~~plL~~lg~~i~~~~g~~G~a~  494 (1378)
T PLN02858        415 VLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVKRAAMGTLTIMASGTDEALKSAGSVLSALSEKLYVIKGGCGAGS  494 (1378)
T ss_pred             EECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChhhhhcCCceEEEECCHHHHHHHHHHHHHHhCcEEEeCCCCCHHH
Confidence            99999999999999999998  8999999999999999999999999999999999999999999998877 46799999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          158 VAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       158 ~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      ++|+++|++.+.++++++|++.+++|
T Consensus       495 ~~KL~nN~l~~~~~aa~aEal~la~k  520 (1378)
T PLN02858        495 GVKMVNQLLAGVHIASAAEAMAFGAR  520 (1378)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999875

>COG0362 Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.96  E-value=1.5e-28  Score=189.06  Aligned_cols=178  Identities=27%  Similarity=0.364  Sum_probs=163.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-----CCcccCCHHHHh---ccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-----GANMALSLSTLA---SGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~---~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||..||.++.++||+|.+|+|++++.+.+.+.     .+..+.+++|++   +...-|++.|..+..++.++   +++.|
T Consensus        14 MG~NLaLNi~~~G~~VavyNRt~~ktd~f~~~~~~~k~i~~~~sieefV~~Le~PRkI~lMVkAG~~VD~~I---~~L~p   90 (473)
T COG0362          14 MGSNLALNIADHGYTVAVYNRTTEKTDEFLAERAKGKNIVPAYSIEEFVASLEKPRKILLMVKAGTPVDAVI---EQLLP   90 (473)
T ss_pred             hhHHHHHHHHhcCceEEEEeCCHHHHHHHHHhCccCCCccccCcHHHHHHHhcCCceEEEEEecCCcHHHHH---HHHHh
Confidence            89999999999999999999999999998875     245677888764   57999999998888788888   89999


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCC------
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN------  146 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~------  146 (183)
                      +|.+|++|||.+++...++....+.+.++|++|+.+.++||...+..|+ .++.+|++++.+.+.++|.++.++      
T Consensus        91 ~Le~gDIiIDGGNs~y~DT~RR~~eL~~~Gi~FvG~GVSGGEeGA~~GP-SiMpGG~~eay~~v~pil~~IaAk~~g~pC  169 (473)
T COG0362          91 LLEKGDIIIDGGNSHYKDTIRRNKELSEKGILFVGMGVSGGEEGARHGP-SIMPGGQKEAYELVAPILTKIAAKVDGEPC  169 (473)
T ss_pred             hcCCCCEEEeCCCcCCchHHHHHHHHHhcCCeEEeccccccccccccCC-CcCCCCCHHHHHHHHHHHHHHHhhcCCCCc
Confidence            9999999999999999888888899999999999999999999999998 899999999999999999999753      


Q ss_pred             eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          147 IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       147 ~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +.++|+.|++|++||+||.+++.-|+.++|+|.+.+
T Consensus       170 c~~iG~~GAGHfVKmVHNGIEYgDMQlIaE~Y~ilk  205 (473)
T COG0362         170 CTWIGPDGAGHFVKMVHNGIEYGDMQLIAEAYDILK  205 (473)
T ss_pred             eeeECCCCCCceeeeeecCchHHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999998754

>KOG2653|consensus

Probab=99.93  E-value=9.1e-26  Score=171.53  Aligned_cols=178  Identities=24%  Similarity=0.333  Sum_probs=161.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc---C--CcccCCHHHHh---ccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE---G--ANMALSLSTLA---SGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~---g--~~~~~~~~~~~---~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||..++.+.+.+||.|.+|+|+..+++++.+.   |  +....+++|.+   +...+|++.+..+.+++..+   +++.+
T Consensus        17 MGqnLiLN~~d~Gf~v~~yNRT~skvD~flaneak~~~i~ga~S~ed~v~klk~PR~iillvkAG~pVD~~I---~~L~p   93 (487)
T KOG2653|consen   17 MGQNLILNIADKGFTVCAYNRTTSKVDEFLANEAKGTKIIGAYSLEDFVSKLKKPRVIILLVKAGAPVDQFI---EELVP   93 (487)
T ss_pred             hhhhhhhcccccCceEEEeccchHhHHHHHHHhhcCCcccCCCCHHHHHHhcCCCcEEEEEeeCCCcHHHHH---HHHHh
Confidence            89999999999999999999999999988764   2  45567888874   67999999999999999998   99999


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCC------
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN------  146 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~------  146 (183)
                      +|.+|.+|||.+++...+.....+.+.++|+-|+.+.++|+++.++.|+ .++.+|++++++.++++|..+..+      
T Consensus        94 ~LekgDiIIDGGNs~y~dT~RR~~el~k~GilfvG~GVSGGEEGAR~GP-SlMpGg~~~Awp~ik~ifq~iaakv~~~ep  172 (487)
T KOG2653|consen   94 YLEKGDIIIDGGNSEYQDTERRCRELAKKGILFVGSGVSGGEEGARYGP-SLMPGGSKEAWPHIKDIFQKIAAKVSDGEP  172 (487)
T ss_pred             hcCCCCEEEeCCcccCcchHHHHHHHHhcCcEEEecCccCcccccccCC-ccCCCCChHHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999988888888888999999999999999999999998 899999999999999999998542      


Q ss_pred             -eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          147 -IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       147 -~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                       +.++|+-|++|++||+||.+++.-|+.+.|++.+..
T Consensus       173 Cc~wvG~~GaGhfVKMVHNGIEYGDMqLI~EaY~vlk  209 (487)
T KOG2653|consen  173 CCDWVGEGGAGHFVKMVHNGIEYGDMQLICEAYDVLK  209 (487)
T ss_pred             CeeeecCCCCccchhhhccCcccchHHHHHHHHHHHH
Confidence             467999999999999999999999999999998754

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=99.93  E-value=4.2e-25  Score=177.73  Aligned_cols=180  Identities=20%  Similarity=0.205  Sum_probs=150.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-------------------cC-CcccCCHHHHhccCCEEEEecCChHH-
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-------------------EG-ANMALSLSTLASGAEFIISMLPASQD-   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-------------------~g-~~~~~~~~~~~~~adiVi~~vp~~~~-   59 (183)
                      ||.++|..|++.||+|++||+++++++.+.+                   .| +..++++.+++++||+||+|+|.+.. 
T Consensus        11 ~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advvii~vpt~~~~   90 (411)
T TIGR03026        11 VGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVIIICVPTPLKE   90 (411)
T ss_pred             hhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEEEEEeCCCCCC
Confidence            7999999999999999999999999887654                   12 34556778888999999999998743 


Q ss_pred             --------HHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCc-EEeecccCCHHHHhcCce------
Q psy755           60 --------VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QIT-FLDAPVSGGTKAAQEATL------  122 (183)
Q Consensus        60 --------~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~-~~~~~~~~~~~~~~~~~~------  122 (183)
                              +..++   +++.+.+++|++|+++|+..|.+.+.+.+.+.++  |.. +.+.++.++|+.+..|..      
T Consensus        91 ~~~~d~~~v~~~~---~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~G~~~~~~~~  167 (411)
T TIGR03026        91 DGSPDLSYVESAA---ETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLREGNAVHDLLN  167 (411)
T ss_pred             CCCcChHHHHHHH---HHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCCCChhhhhcC
Confidence                    55555   7788888999999999999999998887555443  433 455666667766666665      


Q ss_pred             --EEEecCCHHHHHHHHHHHHHhc-CCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          123 --TFMVGGDKSSLEKAKPILKCMG-RNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       123 --~~~~~g~~~~~~~~~~l~~~~g-~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                        .++.+++++..++++++++.++ ..++++++.++|+++|++.|.+.++++++++|+..+|++
T Consensus       168 ~~~iv~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Ae~~Kl~~N~~~a~~ia~~nE~~~la~~  231 (411)
T TIGR03026       168 PDRIVGGETEEAGEAVAELYAPIIEDGPVLVTSIETAEMIKLAENTFRAVKIAFANELARICEA  231 (411)
T ss_pred             CCEEEEeCCHHHHHHHHHHHHHhccCCCEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              6788899999999999999998 578889999999999999999999999999999999874

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=99.91  E-value=3.5e-23  Score=166.36  Aligned_cols=180  Identities=19%  Similarity=0.186  Sum_probs=145.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-cCCHHHH---------------hccCCEEEEecCCh-------
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-ALSLSTL---------------ASGAEFIISMLPAS-------   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~---------------~~~adiVi~~vp~~-------   57 (183)
                      ||.++|.+|+++||+|++||+++++++.+....... ...+++.               .++||+||+|+|.+       
T Consensus        14 ~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~vptp~~~~~~~   93 (415)
T PRK11064         14 IGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIAVPTPFKGDHEP   93 (415)
T ss_pred             hhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEEcCCCCCCCCCc
Confidence            799999999999999999999999988765332221 1122222               24799999999987       


Q ss_pred             --HHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCC--------------cEEeec--ccCCHHHHhc
Q psy755           58 --QDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQI--------------TFLDAP--VSGGTKAAQE  119 (183)
Q Consensus        58 --~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~--------------~~~~~~--~~~~~~~~~~  119 (183)
                        ..+..++   +++.+.+++|++||+.|+..|.+.+.+...+.+.+.              ++..+|  +.+|......
T Consensus        94 dl~~v~~~~---~~i~~~l~~g~iVI~~STv~pgtt~~~~~~l~~~~~~~~~~~~~g~~~~f~v~~~PE~~~~G~~~~~~  170 (415)
T PRK11064         94 DLTYVEAAA---KSIAPVLKKGDLVILESTSPVGATEQMAEWLAEARPDLTFPQQAGEQADINIAYCPERVLPGQVMVEL  170 (415)
T ss_pred             ChHHHHHHH---HHHHHhCCCCCEEEEeCCCCCCHHHHHHHHHHHhccCCcccccccCCCCeEEEECCCccCCCChhhhh
Confidence              5666665   788899999999999999999999999887776532              345666  5555444444


Q ss_pred             CceEEEecC-CHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          120 ATLTFMVGG-DKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       120 ~~~~~~~~g-~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      .....+++| +++..++++++++.++..++++++.++|+++|++.|.+.++++++++|+..+|++
T Consensus       171 ~~~~~vvgG~~~~~~~~~~~ly~~~~~~~~~~~~~~~Ae~~Kl~~N~~~a~~ia~~nE~~~lae~  235 (415)
T PRK11064        171 IKNDRVIGGMTPVCSARASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICAD  235 (415)
T ss_pred             cCCCEEEEeCCHHHHHHHHHHHHHhcCCCeeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444566787 9999999999999999888889999999999999999999999999999999874

>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional

Probab=99.91  E-value=3.2e-23  Score=162.08  Aligned_cols=174  Identities=21%  Similarity=0.321  Sum_probs=142.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch-----hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD-----ASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |.+||.+|+++||+|++|||+++     +.+.+...|+....++.+++++||+||+++|.+..++.++   +++.+.+++
T Consensus        32 G~~MA~~La~aG~~V~v~Dr~~~~l~~~~~~~l~~~Gi~~asd~~eaa~~ADvVIlaVP~~~~v~~Vl---~~L~~~L~~  108 (342)
T PRK12557         32 GSRMAIEFAEAGHDVVLAEPNRSILSEELWKKVEDAGVKVVSDDAEAAKHGEIHILFTPFGKKTVEIA---KNILPHLPE  108 (342)
T ss_pred             HHHHHHHHHhCCCeEEEEECCHHHhhHHHHHHHHHCCCEEeCCHHHHHhCCCEEEEECCCcHHHHHHH---HHHHhhCCC
Confidence            78999999999999999999987     4455666788777788899999999999999877688887   788899999


Q ss_pred             CcEEEeccCCCchhH-HHHHHHHH----hcCCcEEe-ecccCCHHHHhcCceEEEecC--------CHHHHHHHHHHHHH
Q psy755           77 GVIVIDSSTVDPQVP-QTLSNLAR----EKQITFLD-APVSGGTKAAQEATLTFMVGG--------DKSSLEKAKPILKC  142 (183)
Q Consensus        77 ~~iiid~s~~~~~~~-~~~~~~~~----~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g--------~~~~~~~~~~l~~~  142 (183)
                      +++|+|+|+..+... +.+.+.+.    ..|+++.+ .++.+++.    +...++.++        +++.+++++++|++
T Consensus       109 g~IVId~ST~~~~~~s~~l~~~l~~~~~~~gi~~~~p~~v~Gae~----g~l~Vm~gg~t~~~~~~~~e~~e~v~~LL~a  184 (342)
T PRK12557        109 NAVICNTCTVSPVVLYYSLEGELRTKRKDVGISSMHPAAVPGTPQ----HGHYVIAGKTTNGTELATEEQIEKCVELAES  184 (342)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHhcccccccCeeecCCcccccccc----chheEEeCCCcccccCCCHHHHHHHHHHHHH
Confidence            999999999998877 56666664    23554443 33444432    333555544        88999999999999


Q ss_pred             hcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          143 MGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       143 ~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +|.++++++ .|.+..+|+++|++.++++++.+|++.+++|
T Consensus       185 ~G~~v~~~~-~g~~~~vk~~~n~l~av~~a~~aE~~~l~~~  224 (342)
T PRK12557        185 IGKEPYVVP-ADVVSAVADMGSLVTAVALSGVLDYYSVGTK  224 (342)
T ss_pred             cCCEEEEeC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999887777 5999999999999999999999999999864

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=99.89  E-value=2.4e-22  Score=161.63  Aligned_cols=181  Identities=18%  Similarity=0.177  Sum_probs=139.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc----------------ccCCHHHHhccCCEEEEecCCh------H
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN----------------MALSLSTLASGAEFIISMLPAS------Q   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~----------------~~~~~~~~~~~adiVi~~vp~~------~   58 (183)
                      ||..+|.+|++ ||+|++||+++++++.+. .|..                ..++..+.+++||++|+|||.+      .
T Consensus        17 vGlpmA~~la~-~~~V~g~D~~~~~ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~Vptp~~~~~~~   94 (425)
T PRK15182         17 VGLPLAVEFGK-SRQVVGFDVNKKRILELK-NGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITVPTPINTYKQP   94 (425)
T ss_pred             chHHHHHHHhc-CCEEEEEeCCHHHHHHHH-CcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEEcCCCCCCCCCc
Confidence            89999999887 699999999999999988 3322                2334455789999999999988      3


Q ss_pred             HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEe------e--cccCCHHHHhcCce-EEEec
Q psy755           59 DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLD------A--PVSGGTKAAQEATL-TFMVG  127 (183)
Q Consensus        59 ~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~------~--~~~~~~~~~~~~~~-~~~~~  127 (183)
                      +++.++++.+++.+.+++|++||+.||+.|.+.+.+.+...++  |..+.+      +  ++.+|.......+. .++.|
T Consensus        95 dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~~~~~~l~~~~g~~~~~~~~~~~~PE~v~~G~a~~~~~~~~riv~G  174 (425)
T PRK15182         95 DLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEEECVPILARMSGMTFNQDFYVGYSPERINPGDKKHRLTNIKKITSG  174 (425)
T ss_pred             chHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHHHHHHHHHhccCCCcCCCeeEeeCCCcCCCCcccccccCCCeEEEC
Confidence            4456655557888999999999999999999998765444333  555443      2  23334332222222 25556


Q ss_pred             CCHHHHHHHHHHHHHhc-CCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          128 GDKSSLEKAKPILKCMG-RNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       128 g~~~~~~~~~~l~~~~g-~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      .+++..+.++++++.+. ..++++++.+.|+++|+++|.+.++++++++|+..+|++
T Consensus       175 ~~~~~~~~~~~ly~~~~~~~~~~~~~~~~AE~~Kl~~N~~~av~Ia~~NE~a~lae~  231 (425)
T PRK15182        175 STAQIAELIDEVYQQIISAGTYKAESIKVAEAAKVIENTQRDLNIALVNELAIIFNR  231 (425)
T ss_pred             CCHHHHHHHHHHHHHHhhcCcEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77888889999999986 457888999999999999999999999999999999874

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=99.89  E-value=4.7e-22  Score=158.30  Aligned_cols=171  Identities=18%  Similarity=0.253  Sum_probs=138.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH----------------cCCcc--cCCHHHHhccCCEEEEecCCh-----
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK----------------EGANM--ALSLSTLASGAEFIISMLPAS-----   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~----------------~g~~~--~~~~~~~~~~adiVi~~vp~~-----   57 (183)
                      ||..+|..|+. ||+|++||+++++++.+.+                .+...  ..+..+++.+||+||+|+|.+     
T Consensus        11 vGl~~A~~lA~-G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii~Vpt~~~~k~   89 (388)
T PRK15057         11 VGLSNGLLIAQ-NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIATPTDYDPKT   89 (388)
T ss_pred             HHHHHHHHHHh-CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEEeCCCCCccCC
Confidence            79999988875 9999999999999988876                22223  233667789999999999987     


Q ss_pred             -----HHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCce--------EE
Q psy755           58 -----QDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATL--------TF  124 (183)
Q Consensus        58 -----~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~  124 (183)
                           ..++.++   +++.+ +++|++||+.||+.|.+.+.+.+.+.+.++.|       .|+....|++        .+
T Consensus        90 ~~~dl~~v~~v~---~~i~~-~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~-------~PE~l~~G~a~~d~~~p~rv  158 (388)
T PRK15057         90 NYFNTSSVESVI---KDVVE-INPYAVMVIKSTVPVGFTAAMHKKYRTENIIF-------SPEFLREGKALYDNLHPSRI  158 (388)
T ss_pred             CCcChHHHHHHH---HHHHh-cCCCCEEEEeeecCCchHHHHHHHhhcCcEEE-------CcccccCCcccccccCCCEE
Confidence                 5666666   67766 68999999999999999999998877655443       4555666666        77


Q ss_pred             EecCCHHHHHHHHHHHHH--hcCCeE-EeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          125 MVGGDKSSLEKAKPILKC--MGRNIV-HCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       125 ~~~g~~~~~~~~~~l~~~--~g~~~~-~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +.|++++..+++.+++..  ++..+. ++++.++|+++|++.|.+.++++++++|+..+|++
T Consensus       159 v~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~NE~a~lae~  220 (388)
T PRK15057        159 VIGERSERAERFAALLQEGAIKQNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAES  220 (388)
T ss_pred             EEEcCcHHHHHHHHHHHhhhhcCCCceeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888878888888865  565444 68999999999999999999999999999999874

>PRK08507 prephenate dehydrogenase; Validated

Probab=99.82  E-value=1.8e-18  Score=132.47  Aligned_cols=168  Identities=20%  Similarity=0.306  Sum_probs=130.0

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHcCCc-ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKEGAN-MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+++|..|.+.|+  +|++|||++++.+.+.+.|.. ...++.++. ++|+||+|+|+.. +..++   +++.+ ++++
T Consensus        11 mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~-~aD~Vilavp~~~-~~~~~---~~l~~-l~~~   84 (275)
T PRK08507         11 MGGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEELK-KCDVIFLAIPVDA-IIEIL---PKLLD-IKEN   84 (275)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHHh-cCCEEEEeCcHHH-HHHHH---HHHhc-cCCC
Confidence            79999999999996  789999999998888877764 345666755 5999999999855 55565   78888 8899


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCC----HHHHh----cCceEEEec---CCHHHHHHHHHHHHHhcC
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGG----TKAAQ----EATLTFMVG---GDKSSLEKAKPILKCMGR  145 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~----~~~~~----~~~~~~~~~---g~~~~~~~~~~l~~~~g~  145 (183)
                      ++|+|++++++.....+.+.   .+..|+. ||+.|+    +..+.    .+..+++++   ++++.++.++++|+.+|.
T Consensus        85 ~iv~d~gs~k~~i~~~~~~~---~~~~~v~~hPmaG~e~~Gp~~a~~~l~~g~~~il~~~~~~~~~~~~~v~~l~~~~G~  161 (275)
T PRK08507         85 TTIIDLGSTKAKIIESVPKH---IRKNFIAAHPMAGTENSGPKAAIKGLYEGKVVVLCDVEKSGEKHQERAKEIFSGLGM  161 (275)
T ss_pred             CEEEECccchHHHHHHHHHh---cCCCEEecCCcCcCchhhHHhccHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHhCC
Confidence            99999988777666555443   2346788 599874    44332    466666765   466788999999999999


Q ss_pred             CeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy755          146 NIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAM  178 (183)
Q Consensus       146 ~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~  178 (183)
                      +++++++.+....+++++++.+. ...++++++
T Consensus       162 ~~~~~~~~~hD~~~a~vs~lph~-~a~~l~~~~  193 (275)
T PRK08507        162 RIVYMDAKEHDLHAAYISHLPHI-ISFALANTV  193 (275)
T ss_pred             EEEEeCHHHHHHHHHHHhHHHHH-HHHHHHHHH
Confidence            99999999999999999999873 444444443

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=99.82  E-value=2.3e-19  Score=137.68  Aligned_cols=167  Identities=16%  Similarity=0.272  Sum_probs=131.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+++|..|.++|++|++||+++++.+.+.+.|.. ...+..+.+.++|+||+|+|... +..++   +++.+.++++.+
T Consensus        11 mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~-~~~~~---~~l~~~l~~~~i   86 (279)
T PRK07417         11 IGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGL-LLPPS---EQLIPALPPEAI   86 (279)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHH-HHHHH---HHHHHhCCCCcE
Confidence            79999999999999999999999999888887753 23233456789999999999754 55565   788888889999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCH-HHHh-------cCceEEEec---CCHHHHHHHHHHHHHhcCCe
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGT-KAAQ-------EATLTFMVG---GDKSSLEKAKPILKCMGRNI  147 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~-~~~~-------~~~~~~~~~---g~~~~~~~~~~l~~~~g~~~  147 (183)
                      |+|+++.++.....+.+.    ...|+. |||+|++ ....       .+...+++.   ++++.++.++++++.+|.++
T Consensus        87 i~d~~Svk~~~~~~~~~~----~~~~v~~HPm~G~~~~g~~~a~~~lf~g~~~~l~p~~~~~~~~~~~v~~l~~~lG~~~  162 (279)
T PRK07417         87 VTDVGSVKAPIVEAWEKL----HPRFVGSHPMAGTAESGVEAGQRGLFKNRPWVLTPTENTDLNALAIVEELAVSLGSKI  162 (279)
T ss_pred             EEeCcchHHHHHHHHHHh----hCCceeeCCcCCCCcchHHHhhHHHhCCCcEEEccCCCCCHHHHHHHHHHHHHcCCEE
Confidence            999999887776555443    235787 8999865 2222       244344443   47788899999999999999


Q ss_pred             EEeCCcchHHHHHHHHHHHHHHHHHHHH
Q psy755          148 VHCGDSGNGQVAKLCNNMLLGVTMMGVA  175 (183)
Q Consensus       148 ~~~g~~g~a~~~k~~~~~~~~~~~~~~~  175 (183)
                      +++++.+....+++++++......+.++
T Consensus       163 v~~~~~~hD~~~a~~shlp~~~a~~l~~  190 (279)
T PRK07417        163 YTADPEEHDRAVALISHLPVMVSAALIQ  190 (279)
T ss_pred             EEcCHHHHHHHHHHHcchHHHHHHHHHH
Confidence            9999999999999999988877765543

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=99.80  E-value=6.4e-19  Score=137.93  Aligned_cols=179  Identities=20%  Similarity=0.304  Sum_probs=136.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC--------------CcccCCHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG--------------ANMALSLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||..+|..|++.|++|.+|+|++++.+.+.+.+              .....++.+.++++|+||+|+|+ ..++.++  
T Consensus        12 mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v~--   88 (325)
T PRK00094         12 WGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVPS-QALREVL--   88 (325)
T ss_pred             HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCCH-HHHHHHH--
Confidence            799999999999999999999999888887652              34456777888899999999998 5678887  


Q ss_pred             CccccccCCCCcEEEecc-CCCchhHHHHHHHHHhc-----CCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHH
Q psy755           67 SDGILKHAKPGVIVIDSS-TVDPQVPQTLSNLAREK-----QITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPIL  140 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s-~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~  140 (183)
                       +++.+.+.+++++++++ +..+.....+.+.+.+.     ...++..|..........+...++.+++.+.++.++++|
T Consensus        89 -~~l~~~~~~~~~vi~~~ngv~~~~~~~~~~~l~~~~~~~~~~~~~~~P~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l  167 (325)
T PRK00094         89 -KQLKPLLPPDAPIVWATKGIEPGTGKLLSEVLEEELPDLAPIAVLSGPSFAKEVARGLPTAVVIASTDEELAERVQELF  167 (325)
T ss_pred             -HHHHhhcCCCCEEEEEeecccCCCCCcHHHHHHHHcCCCCceEEEECccHHHHHHcCCCcEEEEEeCCHHHHHHHHHHh
Confidence             78888888999999998 55555444555555543     223444554433333334455666777889999999999


Q ss_pred             HHhcCCeEEeCCc-----------------chHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          141 KCMGRNIVHCGDS-----------------GNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       141 ~~~g~~~~~~g~~-----------------g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +..|.++++.++.                 |.+..+|+.+|.+.......++|++.+|++
T Consensus       168 ~~~~~~~~~~~d~~g~~~~k~~~N~~~~~~g~~~~~k~~~n~~~~~~~~~~~E~~~la~~  227 (325)
T PRK00094        168 HSPYFRVYTNTDVIGVELGGALKNVIAIAAGIADGLGLGDNARAALITRGLAEITRLGVA  227 (325)
T ss_pred             CCCCEEEEecCCcchhhHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHH
Confidence            9999877665542                 666778999999999999999999999864

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=99.80  E-value=2.1e-18  Score=137.10  Aligned_cols=156  Identities=13%  Similarity=0.160  Sum_probs=125.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|.++|++|++||+++.             ++..+++++||+||+|+|... ...++   +++.+ +++|++|
T Consensus       110 mG~slA~~l~~~G~~V~~~d~~~~-------------~~~~~~~~~aDlVilavP~~~-~~~~~---~~l~~-l~~~~iv  171 (374)
T PRK11199        110 LGRLFAKMLTLSGYQVRILEQDDW-------------DRAEDILADAGMVIVSVPIHL-TEEVI---ARLPP-LPEDCIL  171 (374)
T ss_pred             hhHHHHHHHHHCCCeEEEeCCCcc-------------hhHHHHHhcCCEEEEeCcHHH-HHHHH---HHHhC-CCCCcEE
Confidence            899999999999999999998642             256677889999999999865 45555   77888 8999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEE-eecccCCHHHHhcCceEEEecC-CHHHHHHHHHHHHHhcCCeEEeCCcchHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFL-DAPVSGGTKAAQEATLTFMVGG-DKSSLEKAKPILKCMGRNIVHCGDSGNGQV  158 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~  158 (183)
                      +|++|+++.....+.+...   ..|+ .|||+|.......+..++++++ +++.++.+.++++.+|.+++++++.+....
T Consensus       172 ~Dv~SvK~~~~~~~~~~~~---~~fvg~HPm~G~~~~~~~~~~vv~~~~~~~~~~~~~~~l~~~lG~~v~~~~~~~HD~~  248 (374)
T PRK11199        172 VDLTSVKNAPLQAMLAAHS---GPVLGLHPMFGPDVGSLAKQVVVVCDGRQPEAYQWLLEQIQVWGARLHRISAVEHDQN  248 (374)
T ss_pred             EECCCccHHHHHHHHHhCC---CCEEeeCCCCCCCCcccCCCEEEEcCCCCchHHHHHHHHHHHCCCEEEECCHHHHHHH
Confidence            9999999888777766532   2588 5999997655455666666666 567788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Q psy755          159 AKLCNNMLLGVTMMGVAEAMNL  180 (183)
Q Consensus       159 ~k~~~~~~~~~~~~~~~E~~~~  180 (183)
                      +++++.+   .|+.+.+++..+
T Consensus       249 ~a~vshL---pH~~a~al~~~l  267 (374)
T PRK11199        249 MAFIQAL---RHFATFAYGLHL  267 (374)
T ss_pred             HHHHHHH---HHHHHHHHHHHH
Confidence            9999955   555555555544

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=99.79  E-value=4.5e-18  Score=132.28  Aligned_cols=168  Identities=16%  Similarity=0.232  Sum_probs=124.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH-----------HcC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA-----------KEG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||.+||..|+++|++|++||++++..+++.           +.|             +....++.+++++||+|++++|.
T Consensus        13 mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~~ad~Vi~avpe   92 (308)
T PRK06129         13 IGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVADADYVQESAPE   92 (308)
T ss_pred             HHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhCCCCEEEECCcC
Confidence            799999999999999999999998776532           333             24567888888999999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEec---CCHHHH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVG---GDKSSL  133 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~  133 (183)
                      ..+.+..++  ..+.+..++ ..++. |++++.....+.+.+...+..+.+||+.+...    .+++.+++   ++++.+
T Consensus        93 ~~~~k~~~~--~~l~~~~~~-~~ii~-ssts~~~~~~la~~~~~~~~~~~~hp~~p~~~----~~lveiv~~~~t~~~~~  164 (308)
T PRK06129         93 NLELKRALF--AELDALAPP-HAILA-SSTSALLASAFTEHLAGRERCLVAHPINPPYL----IPVVEVVPAPWTAPATL  164 (308)
T ss_pred             CHHHHHHHH--HHHHHhCCC-cceEE-EeCCCCCHHHHHHhcCCcccEEEEecCCCccc----CceEEEeCCCCCCHHHH
Confidence            877766665  456555544 44454 44445556677777766677788899976321    12456665   899999


Q ss_pred             HHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          134 EKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       134 ~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +.++++++.+|++++++++.+.|+.+   +++    .+..++|++.++++
T Consensus       165 ~~~~~~~~~lG~~~v~v~~~~~G~i~---nrl----~~a~~~EA~~l~~~  207 (308)
T PRK06129        165 ARAEALYRAAGQSPVRLRREIDGFVL---NRL----QGALLREAFRLVAD  207 (308)
T ss_pred             HHHHHHHHHcCCEEEEecCCCccHHH---HHH----HHHHHHHHHHHHHc
Confidence            99999999999999999987888743   332    33678888887654

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=99.78  E-value=2e-18  Score=135.44  Aligned_cols=175  Identities=15%  Similarity=0.204  Sum_probs=135.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--------C------CcccCCHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--------G------ANMALSLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--------g------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||.+||..|+++||+|++|+|++++.+.+.+.        +      +...+++.++++++|+||+++|.. .++.++  
T Consensus        15 mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~~~-~~~~v~--   91 (328)
T PRK14618         15 WGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVPSK-ALRETL--   91 (328)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECchH-HHHHHH--
Confidence            89999999999999999999999988877754        2      234567888889999999999985 456664  


Q ss_pred             CccccccCCCCcEEEeccCC-Cchh--HHHHHHHHHh---cCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHH
Q psy755           67 SDGILKHAKPGVIVIDSSTV-DPQV--PQTLSNLARE---KQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPIL  140 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~~-~~~~--~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~  140 (183)
                           +.++++.+++++++. .+..  ...+.+.+.+   .++.++..|..........+...++.+++++.++.++++|
T Consensus        92 -----~~l~~~~~vi~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~~~~gP~~a~~~~~~~~~~~~~~~~~~~~~~~v~~ll  166 (328)
T PRK14618         92 -----AGLPRALGYVSCAKGLAPDGGRLSELARVLEFLTQARVAVLSGPNHAEEIARFLPAATVVASPEPGLARRVQAAF  166 (328)
T ss_pred             -----HhcCcCCEEEEEeeccccCCCccchHHHHHHHhcCCCeEEEECccHHHHHHcCCCeEEEEEeCCHHHHHHHHHHh
Confidence                 445678899999984 5443  4566666655   5555666554443333333666778899999999999999


Q ss_pred             HHhcCCeEE--------eCC---------cchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          141 KCMGRNIVH--------CGD---------SGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       141 ~~~g~~~~~--------~g~---------~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +..|.+++.        .+.         .|.+..+|+.+|........+++|++.++++
T Consensus       167 ~~~~~~v~~~~di~g~~~~~~lkN~~ai~~G~~~~~k~~~n~~~~~~~~~~~E~~~la~~  226 (328)
T PRK14618        167 SGPSFRVYTSRDRVGVELGGALKNVIALAAGMVDGLKLGDNAKAALITRGLREMVRFGVA  226 (328)
T ss_pred             CCCcEEEEecCCccchhhhHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHH
Confidence            999987763        443         4788889999999999999999999998763

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=99.78  E-value=1.9e-17  Score=126.10  Aligned_cols=147  Identities=18%  Similarity=0.246  Sum_probs=112.4

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhH-----HHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDAS-----QTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~-----~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |.+||++|+++||+|++|||++++.     +.+.+.|+..++++.++++++|+||+++|++++++.++   .++.+.+++
T Consensus        32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~aaV~eVl---~GLaa~L~~  108 (341)
T TIGR01724        32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGKGTFSIA---RTIIEHVPE  108 (341)
T ss_pred             HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHHHHHHHH---HHHHhcCCC
Confidence            7899999999999999999987654     45777798888899999999999999999999999987   678889999


Q ss_pred             CcEEEeccCCCchhHHHHHHH---HHhcCC---cEEeecccCCHHH---HhcCceEEEe-cCCHHHHHHHHHHHHHhcCC
Q psy755           77 GVIVIDSSTVDPQVPQTLSNL---AREKQI---TFLDAPVSGGTKA---AQEATLTFMV-GGDKSSLEKAKPILKCMGRN  146 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~---~~~~g~---~~~~~~~~~~~~~---~~~~~~~~~~-~g~~~~~~~~~~l~~~~g~~  146 (183)
                      |++|||+||..|.......+.   ..++.+   .|..+.+.+.+..   ...|....-. -.+++..+++.++.++.++.
T Consensus       109 GaIVID~STIsP~t~~~~~e~~l~~~r~d~~v~s~HP~~vP~~~~~~~~~~~~~~~~~~~~A~ee~i~~~~el~~~~~~~  188 (341)
T TIGR01724       109 NAVICNTCTVSPVVLYYSLEKILRLKRTDVGISSMHPAAVPGTPQHGHYVIGGKPTAGKEMATEEQISKCVELAKSTGKK  188 (341)
T ss_pred             CCEEEECCCCCHHHHHHHHHHHhhcCccccCeeccCCCCCCCCCCCceeeeccccccccccCCHHHHHHHHHHHHHhCCC
Confidence            999999999999988777765   333322   2333445554322   1112111111 14788899999999999998


Q ss_pred             eEEeC
Q psy755          147 IVHCG  151 (183)
Q Consensus       147 ~~~~g  151 (183)
                      ++.+-
T Consensus       189 ~~~~p  193 (341)
T TIGR01724       189 AYVVP  193 (341)
T ss_pred             eeecc
Confidence            77654

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=99.78  E-value=4.8e-18  Score=131.00  Aligned_cols=166  Identities=18%  Similarity=0.282  Sum_probs=123.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc------------------------CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE------------------------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~------------------------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||.+||..|+++|++|++||+++++++++.+.                        ++..++++.+.+++||+||+|+|.
T Consensus        12 mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~aD~Vi~avpe   91 (288)
T PRK09260         12 MGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVADADLVIEAVPE   91 (288)
T ss_pred             HHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcCCCEEEEeccC
Confidence            79999999999999999999999988775421                        123456788889999999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEE-EeccCCCchhHHHHHHHHHh-cCCcEEeecccCCHHHHhcCceEEEecC---CHH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIV-IDSSTVDPQVPQTLSNLARE-KQITFLDAPVSGGTKAAQEATLTFMVGG---DKS  131 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~ii-id~s~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~  131 (183)
                      +..++..++  .++.+.+++++++ +++|+..+...........+ .|.||+ .|+.++       +++.++++   +++
T Consensus        92 ~~~~k~~~~--~~l~~~~~~~~il~~~tSt~~~~~l~~~~~~~~r~~g~h~~-~Pv~~~-------~Lve~v~g~~t~~~  161 (288)
T PRK09260         92 KLELKKAVF--ETADAHAPAECYIATNTSTMSPTEIASFTKRPERVIAMHFF-NPVHKM-------KLVELIRGLETSDE  161 (288)
T ss_pred             CHHHHHHHH--HHHHhhCCCCcEEEEcCCCCCHHHHHhhcCCcccEEEEecC-CCcccC-------ceEEEeCCCCCCHH
Confidence            988877665  5677888888876 67777777654333322111 377777 566553       46778887   899


Q ss_pred             HHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          132 SLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      .++.++++++.+|++++++++ ..+.....+.-.+....+..+.|+
T Consensus       162 ~~~~~~~~l~~lg~~~v~v~d-~~Gf~~nRl~~~~~~ea~~~~~~g  206 (288)
T PRK09260        162 TVQVAKEVAEQMGKETVVVNE-FPGFVTSRISALVGNEAFYMLQEG  206 (288)
T ss_pred             HHHHHHHHHHHcCCeEEEecC-cccHHHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999999985 346666666655555555555544

>PRK08655 prephenate dehydrogenase; Provisional

Probab=99.77  E-value=2.7e-17  Score=133.13  Aligned_cols=164  Identities=18%  Similarity=0.307  Sum_probs=130.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH-HcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA-KEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+++|..|.+.|++|++|+|++++..... +.|+...+++.+.+.++|+||+|+|.. .+..++   +++.+.++++++
T Consensus        12 mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~-~~~~vl---~~l~~~l~~~~i   87 (437)
T PRK08655         12 LGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPIN-VTEDVI---KEVAPHVKEGSL   87 (437)
T ss_pred             HHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHH-HHHHHH---HHHHhhCCCCCE
Confidence            789999999999999999999998764443 447766778888899999999999984 456776   888899999999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEecC---CHHHHHHHHHHHHHhcCCeEEeCCcch
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMVGG---DKSSLEKAKPILKCMGRNIVHCGDSGN  155 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~l~~~~g~~~~~~g~~g~  155 (183)
                      |+|++++++.....+.+.++ .+..|+. |||+|.......+..++++.+   +++.++.++++|+.+|.+++++++...
T Consensus        88 ViDvsSvK~~~~~~l~~~~~-~~~~~V~~HPmaGp~~~~~~g~~~il~p~~~~~~~~~~~v~~ll~~~G~~v~~~~~e~H  166 (437)
T PRK08655         88 LMDVTSVKERPVEAMEEYAP-EGVEILPTHPMFGPRTPSLKGQVVILTPTEKRSNPWFDKVKNFLEKEGARVIVTSPEEH  166 (437)
T ss_pred             EEEcccccHHHHHHHHHhcC-CCCEEEEcCCCCCCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHcCCEEEECCHHHH
Confidence            99999999888887777653 4778888 699885444445666676654   577889999999999999999998766


Q ss_pred             HHHHHHHHHHHHHH
Q psy755          156 GQVAKLCNNMLLGV  169 (183)
Q Consensus       156 a~~~k~~~~~~~~~  169 (183)
                      ...+-.++......
T Consensus       167 D~~~a~vs~lph~~  180 (437)
T PRK08655        167 DRIMSVVQGLTHFA  180 (437)
T ss_pred             HHHHHHHHHHHHHH
Confidence            66665555544443

>PF02153 PDH: Prephenate dehydrogenase; InterPro: IPR003099 Members of this family are prephenate dehydrogenases 1

Probab=99.76  E-value=3.3e-17  Score=124.36  Aligned_cols=166  Identities=19%  Similarity=0.319  Sum_probs=123.5

Q ss_pred             HHHHHHhCC--CcEEEEcCCchhHHHHHHcCCccc-CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            5 MARNLLKNG--HDVIVYDKNTDASQTLAKEGANMA-LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         5 iA~~l~~~g--~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      ||+.|.+.|  ++|++||++++..+.+.+.|+... .+..+.+.++|+||+|+|. ..+..++   +++.+.++++++|+
T Consensus         1 ~A~aL~~~g~~~~v~g~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~DlvvlavP~-~~~~~~l---~~~~~~~~~~~iv~   76 (258)
T PF02153_consen    1 IALALRKAGPDVEVYGYDRDPETLEAALELGIIDEASTDIEAVEDADLVVLAVPV-SAIEDVL---EEIAPYLKPGAIVT   76 (258)
T ss_dssp             HHHHHHHTTTTSEEEEE-SSHHHHHHHHHTTSSSEEESHHHHGGCCSEEEE-S-H-HHHHHHH---HHHHCGS-TTSEEE
T ss_pred             ChHHHHhCCCCeEEEEEeCCHHHHHHHHHCCCeeeccCCHhHhcCCCEEEEcCCH-HHHHHHH---HHhhhhcCCCcEEE
Confidence            688899999  589999999999999988887543 2336788999999999987 4567777   89999999999999


Q ss_pred             eccCCCchhHHHHHHHHHhcCCcEEe-ecccCC----HHHHh----cCceEEEecC---CHHHHHHHHHHHHHhcCCeEE
Q psy755           82 DSSTVDPQVPQTLSNLAREKQITFLD-APVSGG----TKAAQ----EATLTFMVGG---DKSSLEKAKPILKCMGRNIVH  149 (183)
Q Consensus        82 d~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~----~~~~~----~~~~~~~~~g---~~~~~~~~~~l~~~~g~~~~~  149 (183)
                      |.++++......+.+... .+..|+. |||+|.    +..+.    .|..++++..   +.+.++.+.++++.+|.++++
T Consensus        77 Dv~SvK~~~~~~~~~~~~-~~~~~v~~HPM~G~e~~G~~~a~~~lf~g~~~il~p~~~~~~~~~~~~~~l~~~~Ga~~~~  155 (258)
T PF02153_consen   77 DVGSVKAPIVEAMERLLP-EGVRFVGGHPMAGPEKSGPEAADADLFEGRNWILCPGEDTDPEALELVEELWEALGARVVE  155 (258)
T ss_dssp             E--S-CHHHHHHHHHHHT-SSGEEEEEEESCSTSSSSGGG-TTTTTTTSEEEEEECTTS-HHHHHHHHHHHHHCT-EEEE
T ss_pred             EeCCCCHHHHHHHHHhcC-cccceeecCCCCCCccccchhhcccccCCCeEEEeCCCCChHHHHHHHHHHHHHCCCEEEE
Confidence            999999999888887766 6778888 899996    22222    4776777744   457889999999999999999


Q ss_pred             eCCcchHHHHHHHHHHHHHHHHHHHH
Q psy755          150 CGDSGNGQVAKLCNNMLLGVTMMGVA  175 (183)
Q Consensus       150 ~g~~g~a~~~k~~~~~~~~~~~~~~~  175 (183)
                      +.+...-..+..++.+-.....+...
T Consensus       156 ~~~eeHD~~~A~vshlpH~~a~al~~  181 (258)
T PF02153_consen  156 MDAEEHDRIMAYVSHLPHLLASALAN  181 (258)
T ss_dssp             --HHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99888888888887766666555544

3.1.12 from EC involved in tyrosine biosynthesis. ; GO: 0004665 prephenate dehydrogenase (NADP+) activity, 0008977 prephenate dehydrogenase activity, 0006571 tyrosine biosynthetic process, 0055114 oxidation-reduction process; PDB: 2F1K_B 2PV7_A 3DZB_B 3KTD_B 3B1F_A 2G5C_D 3GGP_C 3GGG_C 3GGO_D.

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=99.75  E-value=9e-17  Score=122.41  Aligned_cols=171  Identities=18%  Similarity=0.290  Sum_probs=135.3

Q ss_pred             CcHHHHHHHHhCCCcEEEE--cCCchhHHHHHHcCCccc--CCH-HHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGHDVIVY--DKNTDASQTLAKEGANMA--LSL-STLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~--~~~~~~~~~~~~~g~~~~--~~~-~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||+++|+.|.+.|+.|.+|  |++.+..+.....|+...  .+. .+.+..+|+||++||-.. +..++   +++.+.++
T Consensus        14 iG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~-~~~~l---~~l~~~l~   89 (279)
T COG0287          14 MGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEA-TEEVL---KELAPHLK   89 (279)
T ss_pred             HHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHH-HHHHH---HHhcccCC
Confidence            8999999999999987665  555556666666676442  333 567788999999999855 56666   89999999


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCH--HHHhcCceEEEecC---CHHHHHHHHHHHHHhcCCeEE
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGT--KAAQEATLTFMVGG---DKSSLEKAKPILKCMGRNIVH  149 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~--~~~~~~~~~~~~~g---~~~~~~~~~~l~~~~g~~~~~  149 (183)
                      +|.+|+|.++.+.....++.+..++.. +|+. |||+|+.  ...-++..++++..   +.+.++++.++|+.+|.++++
T Consensus        90 ~g~iv~Dv~S~K~~v~~a~~~~~~~~~-~~vg~HPM~G~~~~~~lf~~~~~vltp~~~~~~~~~~~~~~~~~~~ga~~v~  168 (279)
T COG0287          90 KGAIVTDVGSVKSSVVEAMEKYLPGDV-RFVGGHPMFGPEADAGLFENAVVVLTPSEGTEKEWVEEVKRLWEALGARLVE  168 (279)
T ss_pred             CCCEEEecccccHHHHHHHHHhccCCC-eeEecCCCCCCcccccccCCCEEEEcCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            999999999999999999998887766 8888 8999983  33335666677654   356789999999999999999


Q ss_pred             eCCcchHHHHHHHHHHHHHHHHHHHHH
Q psy755          150 CGDSGNGQVAKLCNNMLLGVTMMGVAE  176 (183)
Q Consensus       150 ~g~~g~a~~~k~~~~~~~~~~~~~~~E  176 (183)
                      +.+...-..+-.++..-....++...-
T Consensus       169 ~~~eeHD~~~a~vshLpH~~a~al~~~  195 (279)
T COG0287         169 MDAEEHDRVMAAVSHLPHAAALALANA  195 (279)
T ss_pred             cChHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            999888888888887777666655443

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=99.75  E-value=2.1e-17  Score=135.84  Aligned_cols=166  Identities=25%  Similarity=0.316  Sum_probs=123.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-------------------cC-CcccCCHHHHhccCCEEEEecCChHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-------------------EG-ANMALSLSTLASGAEFIISMLPASQDV   60 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-------------------~g-~~~~~~~~~~~~~adiVi~~vp~~~~~   60 (183)
                      ||.+||.+|+++|++|++||+++++.+.+.+                   .+ +...+++.+++++||+|++++|+..++
T Consensus        15 MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~Vieavpe~~~v   94 (495)
T PRK07531         15 IGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADWIQESVPERLDL   94 (495)
T ss_pred             HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCEEEEcCcCCHHH
Confidence            8999999999999999999999998765421                   12 556778889999999999999999888


Q ss_pred             HHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCC---HHHHHHHH
Q psy755           61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGD---KSSLEKAK  137 (183)
Q Consensus        61 ~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~  137 (183)
                      +..++  .++.+.++++. |+++|++.+... .+.+.+...+..++.||..+.    ..++++.+++|+   ++.++.++
T Consensus        95 k~~l~--~~l~~~~~~~~-iI~SsTsgi~~s-~l~~~~~~~~r~~~~hP~nP~----~~~~Lvevv~g~~t~~e~~~~~~  166 (495)
T PRK07531         95 KRRVL--AEIDAAARPDA-LIGSSTSGFLPS-DLQEGMTHPERLFVAHPYNPV----YLLPLVELVGGGKTSPETIRRAK  166 (495)
T ss_pred             HHHHH--HHHHhhCCCCc-EEEEcCCCCCHH-HHHhhcCCcceEEEEecCCCc----ccCceEEEcCCCCCCHHHHHHHH
Confidence            88765  56766666665 455665555433 556666666777888887732    234567777775   79999999


Q ss_pred             HHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHH-HHHHHhccc
Q psy755          138 PILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMG-VAEAMNLGV  182 (183)
Q Consensus       138 ~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~-~~E~~~~~~  182 (183)
                      ++++.+|..+++++..-        .|.+....+.. +.|++.+++
T Consensus       167 ~~~~~lG~~~v~~~k~~--------~gfi~nrl~~a~~~EA~~L~~  204 (495)
T PRK07531        167 EILREIGMKPVHIAKEI--------DAFVGDRLLEALWREALWLVK  204 (495)
T ss_pred             HHHHHcCCEEEeecCCC--------cchhHHHHHHHHHHHHHHHHH
Confidence            99999999999998533        44444444444 477776654

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=99.75  E-value=2.2e-17  Score=135.76  Aligned_cols=158  Identities=19%  Similarity=0.298  Sum_probs=119.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH-----------HHcC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL-----------AKEG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~-----------~~~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||..||..|+++|++|++||++++.+++.           .+.|             +..++++.+ +.+||+||.++|+
T Consensus        18 MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~-~~~aDlViEav~E   96 (507)
T PRK08268         18 MGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALAD-LADCDLVVEAIVE   96 (507)
T ss_pred             HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHHH-hCCCCEEEEcCcc
Confidence            89999999999999999999999988774           3334             455667765 5699999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEE-eccCCCchhHHHHHHHHH--h--cCCcEEe-ecccCCHHHHhcCceEEEec---
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVI-DSSTVDPQVPQTLSNLAR--E--KQITFLD-APVSGGTKAAQEATLTFMVG---  127 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iii-d~s~~~~~~~~~~~~~~~--~--~g~~~~~-~~~~~~~~~~~~~~~~~~~~---  127 (183)
                      +.+++..+|  .++....+++.++. |+|+..+..   +.+...  +  .|.||++ +|++.         ++.+++   
T Consensus        97 ~~~vK~~vf--~~l~~~~~~~ailasntStl~i~~---la~~~~~p~r~~G~hff~Pa~v~~---------LvEvv~g~~  162 (507)
T PRK08268         97 RLDVKQALF--AQLEAIVSPDCILATNTSSLSITA---IAAALKHPERVAGLHFFNPVPLMK---------LVEVVSGLA  162 (507)
T ss_pred             cHHHHHHHH--HHHHhhCCCCcEEEECCCCCCHHH---HHhhcCCcccEEEEeecCCcccCe---------eEEEeCCCC
Confidence            999999987  55777777888884 777766653   333322  2  3889999 66663         566666   


Q ss_pred             CCHHHHHHHHHHHHHhcCCeEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          128 GDKSSLEKAKPILKCMGRNIVHCGD-SGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       128 g~~~~~~~~~~l~~~~g~~~~~~g~-~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +++++++.+.++++.+|+.++++++ +|  .    +.|-+..   ..++|++.+++
T Consensus       163 Ts~~~~~~~~~l~~~lgk~pv~v~d~pG--f----i~Nrll~---~~~~Ea~~l~~  209 (507)
T PRK08268        163 TDPAVADALYALARAWGKTPVRAKDTPG--F----IVNRAAR---PYYTEALRVLE  209 (507)
T ss_pred             CCHHHHHHHHHHHHHcCCceEEecCCCC--h----HHHHHHH---HHHHHHHHHHH
Confidence            4889999999999999999999986 56  2    3333332   36777776654

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=99.73  E-value=5.1e-17  Score=124.96  Aligned_cols=168  Identities=15%  Similarity=0.242  Sum_probs=128.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHH-----------HHHcC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQT-----------LAKEG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~-----------~~~~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||..||..++.+|++|++||++++..++           +.+.|             +..++++ +.+++||+||.|+|+
T Consensus        16 mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~~d~ViEav~E   94 (286)
T PRK07819         16 MGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFADRQLVIEAVVE   94 (286)
T ss_pred             HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhCCCCEEEEeccc
Confidence            8999999999999999999999998766           23223             2256666 557999999999999


Q ss_pred             hHHHHHHhcCCccccccC-CCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEe-ecccCCHHHHhcCceEEEecCCHHH
Q psy755           57 SQDVLDAYDGSDGILKHA-KPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLD-APVSGGTKAAQEATLTFMVGGDKSS  132 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l-~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~  132 (183)
                      ..+++..+|  ..+.... ++++++.+.|++.|....+.....+++  |.||++ .++.+..+      .+....++++.
T Consensus        95 ~~~~K~~l~--~~l~~~~~~~~~il~snTS~~~~~~la~~~~~~~r~~g~hf~~P~~~~~lvE------lv~~~~T~~~~  166 (286)
T PRK07819         95 DEAVKTEIF--AELDKVVTDPDAVLASNTSSIPIMKLAAATKRPGRVLGLHFFNPVPVLPLVE------LVPTLVTSEAT  166 (286)
T ss_pred             CHHHHHHHH--HHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCccEEEEecCCCcccCceEE------EeCCCCCCHHH
Confidence            999999887  5666666 789999999998888876665555555  788888 45555432      34445679999


Q ss_pred             HHHHHHHHH-HhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy755          133 LEKAKPILK-CMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAM  178 (183)
Q Consensus       133 ~~~~~~l~~-~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~  178 (183)
                      ++.+.+++. .+|+.++.+++ ..+.....+...+....+..+.|+.
T Consensus       167 ~~~~~~~~~~~lgk~pv~v~d-~pGfi~nRi~~~~~~Ea~~ll~eGv  212 (286)
T PRK07819        167 VARAEEFASDVLGKQVVRAQD-RSGFVVNALLVPYLLSAIRMVESGF  212 (286)
T ss_pred             HHHHHHHHHHhCCCCceEecC-CCChHHHHHHHHHHHHHHHHHHhCC
Confidence            999999988 59999998865 4466777666666666666666653

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=99.73  E-value=4e-17  Score=126.98  Aligned_cols=163  Identities=21%  Similarity=0.324  Sum_probs=122.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc-CCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH-AKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~-l~~~~i   79 (183)
                      ||++||..|.++||+|++|+|++.             +++.++++++|+||+++|+ ..++.++   +++.+. ++++++
T Consensus        15 ~G~~lA~~l~~~G~~V~~~~r~~~-------------~~~~~~~~~advvi~~vp~-~~~~~v~---~~l~~~~~~~~~i   77 (308)
T PRK14619         15 WGSTLAGLASANGHRVRVWSRRSG-------------LSLAAVLADADVIVSAVSM-KGVRPVA---EQVQALNLPPETI   77 (308)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCCC-------------CCHHHHHhcCCEEEEECCh-HHHHHHH---HHHHHhcCCCCcE
Confidence            799999999999999999999874             4778888999999999998 5788887   677663 678899


Q ss_pred             EEeccC-CCchhHHHHHHHHHhcCCcEEeeccc--CCHHHH-----hcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeC
Q psy755           80 VIDSST-VDPQVPQTLSNLAREKQITFLDAPVS--GGTKAA-----QEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus        80 iid~s~-~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-----~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      ++++++ ..|.......+.+...   +.++|+.  +++..+     ..+..+++++++++..+.++++|+..+.++++.+
T Consensus        78 vi~~s~gi~~~~~~~~s~~~~~~---~~~~~v~~i~gp~~a~ei~~~~~~~~~~ag~~~~~~~~v~~ll~~~~~~~~~~~  154 (308)
T PRK14619         78 IVTATKGLDPETTRTPSQIWQAA---FPNHPVVVLSGPNLSKEIQQGLPAATVVASRDLAAAETVQQIFSSERFRVYTNS  154 (308)
T ss_pred             EEEeCCcccCCCCcCHHHHHHHH---cCCCceEEEECCCcHHHHhcCCCeEEEEEeCCHHHHHHHHHHhCCCcEEEEecC
Confidence            999886 4555554444544432   3344442  333222     2246678889999999999999999998888777


Q ss_pred             C-cc--h--------------HHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          152 D-SG--N--------------GQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       152 ~-~g--~--------------a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      + .|  -              +..+|+..|.+......++.|++.++++
T Consensus       155 d~~G~~~~~alkNv~ai~~G~~~~~~l~~N~~~a~~~~~~~E~~~l~~~  203 (308)
T PRK14619        155 DPLGTELGGTLKNVIAIAAGVCDGLQLGTNAKAALVTRALPEMIRVGTH  203 (308)
T ss_pred             CchhhhhHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHH
Confidence            6 22  1              2334477888888899999999988763

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=99.72  E-value=1.5e-16  Score=130.55  Aligned_cols=159  Identities=21%  Similarity=0.270  Sum_probs=116.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH-----------HHcC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL-----------AKEG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~-----------~~~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||..||..|+++||+|++||++++.++++           .+.|             +..++++.+ +.+||+||.|+|+
T Consensus        16 MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~-l~~aDlVIEav~E   94 (503)
T TIGR02279        16 MGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHA-LADAGLVIEAIVE   94 (503)
T ss_pred             HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHH-hCCCCEEEEcCcC
Confidence            89999999999999999999999987653           2223             335667765 5699999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHH----hcCCcEEe-ecccCCHHHHhcCceEEEecC---
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAR----EKQITFLD-APVSGGTKAAQEATLTFMVGG---  128 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~----~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g---  128 (183)
                      ..+++..+|  .++....+++.+|...|++.+.+  .+.+.+.    ..|.||++ +|+++         ++.+++|   
T Consensus        95 ~~~vK~~vf--~~l~~~~~~~~IlasnTStl~i~--~iA~~~~~p~r~~G~HFf~Papv~~---------LvEvv~g~~T  161 (503)
T TIGR02279        95 NLEVKKALF--AQLEELCPADTIIASNTSSLSIT--AIAAGLARPERVAGLHFFNPAPVMA---------LVEVVSGLAT  161 (503)
T ss_pred             cHHHHHHHH--HHHHhhCCCCeEEEECCCCCCHH--HHHHhcCcccceEEEeccCccccCc---------eEEEeCCCCC
Confidence            999999887  55666676666665333333333  2333332    34889999 67763         5777777   


Q ss_pred             CHHHHHHHHHHHHHhcCCeEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          129 DKSSLEKAKPILKCMGRNIVHCGD-SGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       129 ~~~~~~~~~~l~~~~g~~~~~~g~-~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +++.++.+.++++.+|+.++++++ +|  .   ++++++    ...++|++.+.+
T Consensus       162 s~e~~~~~~~l~~~lgk~pv~v~d~pG--f---i~Nrl~----~~~~~EA~~l~e  207 (503)
T TIGR02279       162 AAEVAEQLYETALAWGKQPVHCHSTPG--F---IVNRVA----RPYYAEALRALE  207 (503)
T ss_pred             CHHHHHHHHHHHHHcCCeeeEeCCCCC--c---HHHHHH----HHHHHHHHHHHH
Confidence            899999999999999999999987 55  2   233333    247777777654

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=99.72  E-value=1e-16  Score=124.56  Aligned_cols=162  Identities=17%  Similarity=0.225  Sum_probs=114.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh-------HHHH-----------HHc-------------CCcccCC--HHHHhccC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA-------SQTL-----------AKE-------------GANMALS--LSTLASGA   47 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~-------~~~~-----------~~~-------------g~~~~~~--~~~~~~~a   47 (183)
                      ||..||..++.+|++|++||++++.       +++.           .+.             .+....+  ..+++++|
T Consensus         1 MG~giA~~~a~~G~~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~a~~~a   80 (314)
T PRK08269          1 MGQGIALAFAFAGHDVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVVARDGAADALADA   80 (314)
T ss_pred             CcHHHHHHHHhCCCeEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEeecCcchHHHhccC
Confidence            9999999999999999999999953       2111           111             1333322  66788999


Q ss_pred             CEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHH----hcCCcEEeecccCCHHHHhcCceE
Q psy755           48 EFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAR----EKQITFLDAPVSGGTKAAQEATLT  123 (183)
Q Consensus        48 diVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~  123 (183)
                      |+||.++|.+..++..+|  .++.+..++++++.  ||+++.....+.+...    ..|.||++.|....        ++
T Consensus        81 D~ViEav~E~~~~K~~~f--~~l~~~~~~~~ila--SntS~~~~~~la~~~~~p~r~~g~Hf~~Pp~~~~--------lv  148 (314)
T PRK08269         81 DLVFEAVPEVLDAKREAL--RWLGRHVDADAIIA--STTSTFLVTDLQRHVAHPERFLNAHWLNPAYLMP--------LV  148 (314)
T ss_pred             CEEEECCcCCHHHHHHHH--HHHHhhCCCCcEEE--EccccCCHHHHHhhcCCcccEEEEecCCccccCc--------eE
Confidence            999999999999999988  56888888998884  5555555556666553    23788888762221        11


Q ss_pred             EEe---cCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          124 FMV---GGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       124 ~~~---~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      -++   +++++.++.+.++++.+|+.++++++.+ +++       +.......++|++.+++
T Consensus       149 EVv~g~~t~~e~~~~~~~ll~~lGk~~v~v~d~~-Gfi-------~nri~~~~l~EAl~l~e  202 (314)
T PRK08269        149 EVSPSDATDPAVVDRLAALLERIGKVPVVCGPSP-GYI-------VPRIQALAMNEAARMVE  202 (314)
T ss_pred             EEeCCCCCCHHHHHHHHHHHHHcCCcEEEecCCC-Ccc-------hHHHHHHHHHHHHHHHH
Confidence            111   4688999999999999999999999854 433       33444456666666544

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=99.71  E-value=4.9e-16  Score=120.72  Aligned_cols=182  Identities=19%  Similarity=0.221  Sum_probs=136.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-------------------C-CcccCCHHHHhccCCEEEEecCChHH-
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-------------------G-ANMALSLSTLASGAEFIISMLPASQD-   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-------------------g-~~~~~~~~~~~~~adiVi~~vp~~~~-   59 (183)
                      +|..+|..++++|++|.++|.++.+++.+...                   | ...+++.++ ++.||++++|||.|.. 
T Consensus        20 VGLPlA~~fA~~G~~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraTtd~~~-l~~~dv~iI~VPTPl~~   98 (436)
T COG0677          20 VGLPLAAAFASAGFKVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRATTDPEE-LKECDVFIICVPTPLKK   98 (436)
T ss_pred             ccHHHHHHHHHcCCceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceEecChhh-cccCCEEEEEecCCcCC
Confidence            68999999999999999999999988766542                   2 334444444 4589999999998742 


Q ss_pred             -----HHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcE-----Ee-ec--ccCCHHHHh-cCceE
Q psy755           60 -----VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITF-----LD-AP--VSGGTKAAQ-EATLT  123 (183)
Q Consensus        60 -----~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~-----~~-~~--~~~~~~~~~-~~~~~  123 (183)
                           +..+....+.+.+.|++|++||--|++.|.+.+.+...+.+.  |..+     +. +|  +..|....+ ....-
T Consensus        99 ~~~pDls~v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sgL~~~~Df~laysPERv~PG~~~~el~~~~k  178 (436)
T COG0677          99 YREPDLSYVESAARSIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSGLKFGEDFYLAYSPERVLPGNVLKELVNNPK  178 (436)
T ss_pred             CCCCChHHHHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHHHHHHhhcCCCcccceeeEeeCccccCCCchhhhhhcCCc
Confidence                 112222227889999999999999999999999999888774  3333     22 34  222211111 11112


Q ss_pred             EEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          124 FMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       124 ~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      ++.|.+++..+.+..|++.+-...+.+.+.-.|+++|++.|.++.+++++++|+..+|++
T Consensus       179 VIgG~tp~~~e~a~~lY~~iv~~~~~vts~~tAEm~Kl~EN~fRdVNIALaNElali~~~  238 (436)
T COG0677         179 VIGGVTPKCAELAAALYKTIVEGVIPVTSARTAEMVKLTENTFRDVNIALANELALICNA  238 (436)
T ss_pred             eeecCCHHHHHHHHHHHHHheEEEEEcCChHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence            455567888899999999987668888889999999999999999999999999888764

>PRK06545 prephenate dehydrogenase; Validated

Probab=99.71  E-value=6.5e-16  Score=122.48  Aligned_cols=168  Identities=21%  Similarity=0.282  Sum_probs=129.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC--Cc--ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc-cCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG--AN--MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK-HAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--~~--~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~-~l~   75 (183)
                      ||++||+.|.++|++|.+|+++++..+...+.+  +.  ..+++.+++++||+||+|+|.. .+..++   +++.+ .++
T Consensus        11 iG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~-~~~~vl---~~l~~~~l~   86 (359)
T PRK06545         11 IGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVD-ATAALL---AELADLELK   86 (359)
T ss_pred             HHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHH-HHHHHH---HHHhhcCCC
Confidence            799999999999999999998887655544443  22  2356778889999999999984 577777   77877 478


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCH----HH----HhcCceEEEec---CCHHHHHHHHHHHHHh
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGT----KA----AQEATLTFMVG---GDKSSLEKAKPILKCM  143 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~----~~----~~~~~~~~~~~---g~~~~~~~~~~l~~~~  143 (183)
                      ++.+|+|.++++......+.+. ...+.+|++ |||+|++    ..    ...+..++++.   .+++.++.++++++.+
T Consensus        87 ~~~ivtDv~SvK~~i~~~~~~~-~~~~~~~ig~HPMaG~e~sG~~aa~~~lf~g~~~il~~~~~~~~~~~~~v~~l~~~l  165 (359)
T PRK06545         87 PGVIVTDVGSVKGAILAEAEAL-LGDLIRFVGGHPMAGSHKSGVAAARADLFENAPWVLTPDDHTDPDAVAELKDLLSGT  165 (359)
T ss_pred             CCcEEEeCccccHHHHHHHHHh-cCCCCeEEeeCCcCcCchhhHHHhcHHHHCCCcEEEecCCCCCHHHHHHHHHHHHHc
Confidence            8999999999998887777665 334678998 8999863    11    12355456664   4778889999999999


Q ss_pred             cCCeEEeCCcchHHHHHHHHHHHHHHHHHH
Q psy755          144 GRNIVHCGDSGNGQVAKLCNNMLLGVTMMG  173 (183)
Q Consensus       144 g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~  173 (183)
                      |..++++++.....++.+++..-.....+.
T Consensus       166 Ga~~v~~~~~~HD~~~A~vshlPh~ia~al  195 (359)
T PRK06545        166 GAKFVVLDAEEHDRAVALVSHLPHILASSL  195 (359)
T ss_pred             CCEEEECCHHHHhHHHhHhccHHHHHHHHH
Confidence            999999998777888888777766555433

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=99.70  E-value=2.1e-16  Score=122.76  Aligned_cols=167  Identities=20%  Similarity=0.237  Sum_probs=123.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------c---------CCcccCCHHHHhccCCEEEEecCChHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------E---------GANMALSLSTLASGAEFIISMLPASQDV   60 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~---------g~~~~~~~~~~~~~adiVi~~vp~~~~~   60 (183)
                      ||..||..|+.+|++|++||++++..+++.+           .         .+...+++++++++||+|+.++|...++
T Consensus        18 MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDlViEavpE~l~v   97 (321)
T PRK07066         18 IGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADFIQESAPEREAL   97 (321)
T ss_pred             HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCEEEECCcCCHHH
Confidence            8999999999999999999999987654322           1         2355678888899999999999999999


Q ss_pred             HHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccCCHHHHhcCceEEEe---cCCHHHH
Q psy755           61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSGGTKAAQEATLTFMV---GGDKSSL  133 (183)
Q Consensus        61 ~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~  133 (183)
                      |..+|  .++.+..+++.+| .+||+ +.....+.+.+...    +.||++.|-.-        +++-++   ..+++.+
T Consensus        98 K~~lf--~~l~~~~~~~aIl-aSnTS-~l~~s~la~~~~~p~R~~g~HffnP~~~~--------pLVEVv~g~~T~~e~~  165 (321)
T PRK07066         98 KLELH--ERISRAAKPDAII-ASSTS-GLLPTDFYARATHPERCVVGHPFNPVYLL--------PLVEVLGGERTAPEAV  165 (321)
T ss_pred             HHHHH--HHHHHhCCCCeEE-EECCC-ccCHHHHHHhcCCcccEEEEecCCccccC--------ceEEEeCCCCCCHHHH
Confidence            99887  7888888888744 44444 33333444443321    45665533221        123233   3478999


Q ss_pred             HHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q psy755          134 EKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMN  179 (183)
Q Consensus       134 ~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~  179 (183)
                      +.+.++++++|+.++.+.....++.+..++..+....+..+.|+..
T Consensus       166 ~~~~~f~~~lGk~pV~v~kd~pGFi~NRl~~a~~~EA~~lv~eGva  211 (321)
T PRK07066        166 DAAMGIYRALGMRPLHVRKEVPGFIADRLLEALWREALHLVNEGVA  211 (321)
T ss_pred             HHHHHHHHHcCCEeEecCCCCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999999876666889988888888888877777644

>PLN02688 pyrroline-5-carboxylate reductase

Probab=99.70  E-value=8.7e-16  Score=117.15  Aligned_cols=140  Identities=16%  Similarity=0.202  Sum_probs=104.3

Q ss_pred             CcHHHHHHHHhCCC----cEEEE-cCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH----DVIVY-DKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~----~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||.+|+++|.++|+    +|++| +|++++.+.+.+.|+...+++.++++++|+||+|+| ++.++.++   +++.+.++
T Consensus        11 mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~-~~~~~~vl---~~l~~~~~   86 (266)
T PLN02688         11 MAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVK-PQVVKDVL---TELRPLLS   86 (266)
T ss_pred             HHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEEC-cHHHHHHH---HHHHhhcC
Confidence            89999999999998    89999 999999988888888888889999999999999997 47788888   67878888


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEe--cCCHHHHHHHHHHHHHhcCCeEEeC
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMV--GGDKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      ++++||+.++..+..  .+.+.+...  +++. +|..+.  ....+...+..  +++++.++.++++|+.+|. +++++
T Consensus        87 ~~~~iIs~~~g~~~~--~l~~~~~~~--~vvr~mP~~~~--~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~G~-~~~~~  158 (266)
T PLN02688         87 KDKLLVSVAAGITLA--DLQEWAGGR--RVVRVMPNTPC--LVGEAASVMSLGPAATADDRDLVATLFGAVGK-IWVVD  158 (266)
T ss_pred             CCCEEEEecCCCcHH--HHHHHcCCC--CEEEECCCcHH--HHhCceEEEEeCCCCCHHHHHHHHHHHHhCCC-EEEeC
Confidence            899888775544332  333333221  5554 454433  33333322322  3478889999999999999 87764

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=99.68  E-value=2.9e-15  Score=116.50  Aligned_cols=167  Identities=18%  Similarity=0.341  Sum_probs=126.7

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHcCC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKEGA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||.+++..|.+.|+  +|++|||++++.+.+.+.|.  ....+..+.++++|+||+|+|.. ....++   +++.+.+++
T Consensus        17 mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~-~~~~v~---~~l~~~l~~   92 (307)
T PRK07502         17 IGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVG-ASGAVA---AEIAPHLKP   92 (307)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHH-HHHHHH---HHHHhhCCC
Confidence            78999999999985  89999999998888877764  23457778889999999999984 456665   677788889


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHH-HHh-------cCceEEEe---cCCHHHHHHHHHHHHHhc
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTK-AAQ-------EATLTFMV---GGDKSSLEKAKPILKCMG  144 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~-~~~-------~~~~~~~~---~g~~~~~~~~~~l~~~~g  144 (183)
                      +.+|+|+++.+......+.+.+. .+.+|+. +|+.++.. ...       .+..++++   +++++.++.+.++++.+|
T Consensus        93 ~~iv~dvgs~k~~~~~~~~~~~~-~~~~~v~~hPm~g~e~~G~~~a~~~l~~g~~~~l~~~~~~~~~~~~~~~~l~~~lG  171 (307)
T PRK07502         93 GAIVTDVGSVKASVIAAMAPHLP-EGVHFIPGHPLAGTEHSGPDAGFAELFENRWCILTPPEGTDPAAVARLTAFWRALG  171 (307)
T ss_pred             CCEEEeCccchHHHHHHHHHhCC-CCCeEEeCCCCCCCcccchhhcCHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence            99999999988777666655443 3667888 69987431 111       24334444   457788899999999999


Q ss_pred             CCeEEeCCcchHHHHHHHHHHHHHHHHH
Q psy755          145 RNIVHCGDSGNGQVAKLCNNMLLGVTMM  172 (183)
Q Consensus       145 ~~~~~~g~~g~a~~~k~~~~~~~~~~~~  172 (183)
                      .+++++++......+-+++.........
T Consensus       172 ~~~~~~~~~~hD~~~A~~s~lph~~a~~  199 (307)
T PRK07502        172 ARVEEMDPEHHDLVLAITSHLPHLIAYT  199 (307)
T ss_pred             CEEEEcCHHHHhHHHHHHhhHHHHHHHH
Confidence            9999999877777777777666554443

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=99.68  E-value=3.2e-15  Score=121.72  Aligned_cols=180  Identities=14%  Similarity=0.162  Sum_probs=135.7

Q ss_pred             CcHHHHHHHHhCC--CcEEEEcCCchhHHHHHHcC-------------------CcccCCHHHHhccCCEEEEecCChH-
Q psy755            1 MGSHMARNLLKNG--HDVIVYDKNTDASQTLAKEG-------------------ANMALSLSTLASGAEFIISMLPASQ-   58 (183)
Q Consensus         1 mG~~iA~~l~~~g--~~V~~~~~~~~~~~~~~~~g-------------------~~~~~~~~~~~~~adiVi~~vp~~~-   58 (183)
                      +|..+|..|+++|  ++|++||+++++++.+.+.+                   ...+++..+.+++||++|+|||.|. 
T Consensus        12 vGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~advi~I~V~TP~~   91 (473)
T PLN02353         12 VGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEADIVFVSVNTPTK   91 (473)
T ss_pred             HHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcCCEEEEEeCCCCC
Confidence            5889999999884  78999999999988865421                   2344566778899999999997654 


Q ss_pred             -------------HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--C--CcEEeecccCCHHHHhc--
Q psy755           59 -------------DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--Q--ITFLDAPVSGGTKAAQE--  119 (183)
Q Consensus        59 -------------~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g--~~~~~~~~~~~~~~~~~--  119 (183)
                                   .+..++   +.+.+.++++++||..|++.|.+.+.+...+.+.  |  +++..+|.+-.+-.+..  
T Consensus        92 ~~g~~~~~~~Dls~v~~a~---~~i~~~l~~~~lVv~~STvp~Gtt~~~~~~l~~~~~g~~f~v~~~PErl~~G~a~~d~  168 (473)
T PLN02353         92 TRGLGAGKAADLTYWESAA---RMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINFQILSNPEFLAEGTAIEDL  168 (473)
T ss_pred             CCCCcCCCCCcHHHHHHHH---HHHHhhCCCCcEEEEeCCCCCChHHHHHHHHHhhCCCCCeEEEECCCccCCCCccccc
Confidence                         345555   7888999999999999999999999988887764  3  34445664432211111  


Q ss_pred             -CceEEEecCC-----HHHHHHHHHHHHHhcC-CeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          120 -ATLTFMVGGD-----KSSLEKAKPILKCMGR-NIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       120 -~~~~~~~~g~-----~~~~~~~~~l~~~~g~-~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                       ..--+++|+.     +++.+.++++++.+-. .++.+.+...|++.|++.|.++.+++++++|+..+|++
T Consensus       169 ~~p~riViG~~~~~~~~~a~~~~~~lY~~~~~~~~i~~~s~~~AE~~K~~eN~~ra~~Iaf~NEla~lce~  239 (473)
T PLN02353        169 FKPDRVLIGGRETPEGQKAVQALKDVYAHWVPEERIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEA  239 (473)
T ss_pred             CCCCEEEEccCCchhhHHHHHHHHHHHHHhhcCCCEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             1112444542     3467888999998853 46667778999999999999999999999999999874

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=99.68  E-value=4.3e-16  Score=120.35  Aligned_cols=164  Identities=18%  Similarity=0.223  Sum_probs=110.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------cC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------EG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||.+||..|+++|++|++||+++++++++.+           .|             +...++++ .+++||+||+|+|.
T Consensus        15 mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~aD~Vieavpe   93 (292)
T PRK07530         15 MGNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDLE-DLADCDLVIEAATE   93 (292)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCHH-HhcCCCEEEEcCcC
Confidence            7999999999999999999999988766432           12             23455664 57899999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh----cCCcEEe-ecccCCHHHHhcCceEEEecCCHH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE----KQITFLD-APVSGGTKAAQEATLTFMVGGDKS  131 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~----~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~  131 (183)
                      ..+++..++  +++.+.++++++|+..+++.+..  .+.+.+..    .|.||++ .|+.+..+      .+...+++++
T Consensus        94 ~~~~k~~~~--~~l~~~~~~~~ii~s~ts~~~~s--~la~~~~~~~r~~g~h~~~p~~~~~~ve------i~~g~~t~~~  163 (292)
T PRK07530         94 DETVKRKIF--AQLCPVLKPEAILATNTSSISIT--RLASATDRPERFIGIHFMNPVPVMKLVE------LIRGIATDEA  163 (292)
T ss_pred             CHHHHHHHH--HHHHhhCCCCcEEEEcCCCCCHH--HHHhhcCCcccEEEeeccCCcccCceEE------EeCCCCCCHH
Confidence            877766655  67888888999887433333322  34444321    2677777 34443211      1112357899


Q ss_pred             HHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHH
Q psy755          132 SLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAE  176 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E  176 (183)
                      .++.+.++++.+|+.++++++.+ +.....+.-.+....+..+.|
T Consensus       164 ~~~~~~~~~~~~gk~~v~~~d~p-g~i~nRl~~~~~~ea~~~~~~  207 (292)
T PRK07530        164 TFEAAKEFVTKLGKTITVAEDFP-AFIVNRILLPMINEAIYTLYE  207 (292)
T ss_pred             HHHHHHHHHHHcCCeEEEecCcC-ChHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999888744 444444433333333444444

>PLN02256 arogenate dehydrogenase

Probab=99.68  E-value=3.6e-15  Score=115.39  Aligned_cols=163  Identities=14%  Similarity=0.174  Sum_probs=123.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccc-cccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGI-LKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l-~~~l~~~~   78 (183)
                      ||.++|+.|.+.|++|++||+++.. +.+...|+....+..+++ .++|+||+|+|. ..+..++   +++ .+.+++++
T Consensus        47 mG~slA~~L~~~G~~V~~~d~~~~~-~~a~~~gv~~~~~~~e~~~~~aDvVilavp~-~~~~~vl---~~l~~~~l~~~~  121 (304)
T PLN02256         47 FGQFLAKTFVKQGHTVLATSRSDYS-DIAAELGVSFFRDPDDFCEEHPDVVLLCTSI-LSTEAVL---RSLPLQRLKRST  121 (304)
T ss_pred             HHHHHHHHHHhCCCEEEEEECccHH-HHHHHcCCeeeCCHHHHhhCCCCEEEEecCH-HHHHHHH---HhhhhhccCCCC
Confidence            7999999999999999999999743 445556776667788776 479999999987 5677776   677 56788999


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHH--HhcCceEEEec-------CCHHHHHHHHHHHHHhcCCeE
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKA--AQEATLTFMVG-------GDKSSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~--~~~~~~~~~~~-------g~~~~~~~~~~l~~~~g~~~~  148 (183)
                      +|+|+++++......+.+.+.. +.+|+. ||++|....  ...+...+.+.       .+++..+.++++|+.+|.+++
T Consensus       122 iviDv~SvK~~~~~~~~~~l~~-~~~~V~~HPmaG~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~l~~~lGa~v~  200 (304)
T PLN02256        122 LFVDVLSVKEFPKNLLLQVLPE-EFDILCTHPMFGPESGKGGWAGLPFVYDKVRIGDEGEREARCERFLDIFEEEGCRMV  200 (304)
T ss_pred             EEEecCCchHHHHHHHHHhCCC-CCeEEecCCCCCCCCCccccCCCeEEEecceecCCCCCHHHHHHHHHHHHHCCCEEE
Confidence            9999999988777777766543 567888 899986532  11233233332       266788899999999999999


Q ss_pred             EeCCcchHHHHHHHHHHHHHH
Q psy755          149 HCGDSGNGQVAKLCNNMLLGV  169 (183)
Q Consensus       149 ~~g~~g~a~~~k~~~~~~~~~  169 (183)
                      .+.+...-.++-.++.+-...
T Consensus       201 ~~~~eeHD~~vA~iShLpH~l  221 (304)
T PLN02256        201 EMSCEEHDRYAAGSQFITHTV  221 (304)
T ss_pred             EeCHHHHhHHHHhhhhHHHHH
Confidence            999877787777777665543

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=99.68  E-value=8.5e-16  Score=118.44  Aligned_cols=169  Identities=15%  Similarity=0.218  Sum_probs=119.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-------------------------CCcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-------------------------GANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-------------------------g~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      ||.+||..|+++|++|++||+++++++++.+.                         ++..++++.+++++||+||+|+|
T Consensus        14 mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~~aDlVieavp   93 (287)
T PRK08293         14 LGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAVKDADLVIEAVP   93 (287)
T ss_pred             HHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHhcCCCEEEEecc
Confidence            79999999999999999999999876655321                         23346778888899999999999


Q ss_pred             ChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEe---cCCHH
Q psy755           56 ASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMV---GGDKS  131 (183)
Q Consensus        56 ~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~---~g~~~  131 (183)
                      ...+.+..++  +++.+.++++++|++.+++.+..  .+.+... +..+|+. |+...    ....+.+.++   ..+++
T Consensus        94 e~~~~k~~~~--~~l~~~~~~~~ii~sntSt~~~~--~~~~~~~-~~~r~vg~Hf~~p----~~~~~lvevv~~~~t~~~  164 (287)
T PRK08293         94 EDPEIKGDFY--EELAKVAPEKTIFATNSSTLLPS--QFAEATG-RPEKFLALHFANE----IWKNNTAEIMGHPGTDPE  164 (287)
T ss_pred             CCHHHHHHHH--HHHHhhCCCCCEEEECcccCCHH--HHHhhcC-CcccEEEEcCCCC----CCcCCeEEEeCCCCCCHH
Confidence            8766655544  67888888888886666555443  2333322 2223444 22111    1122334443   46889


Q ss_pred             HHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy755          132 SLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAM  178 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~  178 (183)
                      .++.+.++++.+|+.++.+.+...+..+..+...+....+..+.|++
T Consensus       165 ~~~~~~~~~~~~Gk~pv~v~~d~pgfi~nRi~~~~~~ea~~l~~~g~  211 (287)
T PRK08293        165 VFDTVVAFAKAIGMVPIVLKKEQPGYILNSLLVPFLSAALALWAKGV  211 (287)
T ss_pred             HHHHHHHHHHHcCCeEEEecCCCCCHhHHHHHHHHHHHHHHHHHcCC
Confidence            99999999999999999998767788888888777777777666654

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=99.67  E-value=5.3e-15  Score=115.31  Aligned_cols=178  Identities=17%  Similarity=0.188  Sum_probs=135.4

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-------------------C-CcccCCHHHHhccCCEEEEecCChHH--
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKE-------------------G-ANMALSLSTLASGAEFIISMLPASQD--   59 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-------------------g-~~~~~~~~~~~~~adiVi~~vp~~~~--   59 (183)
                      |...+.+|++.||+|+..|.++++++.+.+.                   | ...+++.+++++++|++|+|||.|..  
T Consensus        12 GLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv~fIavgTP~~~d   91 (414)
T COG1004          12 GLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADVVFIAVGTPPDED   91 (414)
T ss_pred             HHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCEEEEEcCCCCCCC
Confidence            7788999999999999999999998876542                   1 45677888899999999999987743  


Q ss_pred             -------HHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCce--------EE
Q psy755           60 -------VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATL--------TF  124 (183)
Q Consensus        60 -------~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------~~  124 (183)
                             ++.+.   +.+.+.++..++||.-||+.+.+...+.+.+......- +-.+...|+.-++|.+        -+
T Consensus        92 g~aDl~~V~ava---~~i~~~~~~~~vvV~KSTVPvGt~~~v~~~i~~~~~~~-~f~v~~NPEFLREG~Av~D~~~PdRI  167 (414)
T COG1004          92 GSADLSYVEAVA---KDIGEILDGKAVVVIKSTVPVGTTEEVRAKIREENSGK-DFEVASNPEFLREGSAVYDFLYPDRI  167 (414)
T ss_pred             CCccHHHHHHHH---HHHHhhcCCCeEEEEcCCCCCCchHHHHHHHHhhcccC-CceEecChHHhcCcchhhhccCCCeE
Confidence                   34444   78888898889999999999999999998887653210 2122233444444332        24


Q ss_pred             EecC-CHHHHHHHHHHHHHh--cCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          125 MVGG-DKSSLEKAKPILKCM--GRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       125 ~~~g-~~~~~~~~~~l~~~~--g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      ++|. ++++.+.++++++.+  ...++...+...|++.|...|.+.++.+++++|.-.+|++
T Consensus       168 ViG~~~~~a~~~~~ely~~~~~~~~p~l~t~~~~AE~IKyaaNafLAtKIsFiNEia~ice~  229 (414)
T COG1004         168 VIGVRSERAAAVLRELYAPFLRQDVPILFTDLREAELIKYAANAFLATKISFINEIANICEK  229 (414)
T ss_pred             EEccCChhHHHHHHHHHhhhhhcCCCEEEecchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4454 445677888888776  3345556667889999999999999999999999999874

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=99.66  E-value=1.3e-15  Score=117.88  Aligned_cols=152  Identities=20%  Similarity=0.270  Sum_probs=106.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHH-----------HHHcC------------CcccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQT-----------LAKEG------------ANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~-----------~~~~g------------~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      ||.+||..|+++|++|++||+++++.++           +.+.|            .....+..+.+++||+||+|+|..
T Consensus        15 mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~aD~Vieav~e~   94 (295)
T PLN02545         15 MGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRDADFIIEAIVES   94 (295)
T ss_pred             HHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCCCCEEEEcCccC
Confidence            8999999999999999999999988754           22222            122233345689999999999988


Q ss_pred             HHHHHHhcCCccccccCCCCcEEE-eccCCCchhHHHHHHHHH-hcCCcEEeecccCCHHHHhcCceEEEec---CCHHH
Q psy755           58 QDVLDAYDGSDGILKHAKPGVIVI-DSSTVDPQVPQTLSNLAR-EKQITFLDAPVSGGTKAAQEATLTFMVG---GDKSS  132 (183)
Q Consensus        58 ~~~~~v~~~~~~l~~~l~~~~iii-d~s~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~  132 (183)
                      .+++..++  .++.+.++++++|+ ++|+..+........... -.|+||++.|...        +.+.++.   ++++.
T Consensus        95 ~~~k~~v~--~~l~~~~~~~~il~s~tS~i~~~~l~~~~~~~~r~~g~h~~~pp~~~--------~lveiv~g~~t~~e~  164 (295)
T PLN02545         95 EDLKKKLF--SELDRICKPSAILASNTSSISITRLASATQRPQQVIGMHFMNPPPIM--------KLVEIIRGADTSDEV  164 (295)
T ss_pred             HHHHHHHH--HHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEeccCCcccC--------ceEEEeCCCCCCHHH
Confidence            88888776  66778888888886 566655444333322111 1367777776553        2344443   58899


Q ss_pred             HHHHHHHHHHhcCCeEEeCCcchHHHHHHHH
Q psy755          133 LEKAKPILKCMGRNIVHCGDSGNGQVAKLCN  163 (183)
Q Consensus       133 ~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~  163 (183)
                      ++.++++++.+|+.++++++. .+.....+.
T Consensus       165 ~~~~~~ll~~lG~~~~~~~d~-~g~i~nri~  194 (295)
T PLN02545        165 FDATKALAERFGKTVVCSQDY-PGFIVNRIL  194 (295)
T ss_pred             HHHHHHHHHHcCCeeEEecCc-ccHHHHHHH
Confidence            999999999999999888762 234443333

>PRK08818 prephenate dehydrogenase; Provisional

Probab=99.65  E-value=6.5e-15  Score=116.24  Aligned_cols=153  Identities=14%  Similarity=0.180  Sum_probs=117.2

Q ss_pred             CcHHHHHHHHhC-CCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc---CCC
Q psy755            1 MGSHMARNLLKN-GHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH---AKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~---l~~   76 (183)
                      ||+++|+.|.+. |++|++||++.+           ...++.+.+.+||+||+|+|... +..++   +++.+.   +++
T Consensus        16 iGgslA~alk~~~~~~V~g~D~~d~-----------~~~~~~~~v~~aDlVilavPv~~-~~~~l---~~l~~~~~~l~~   80 (370)
T PRK08818         16 YGRWLARFLRTRMQLEVIGHDPADP-----------GSLDPATLLQRADVLIFSAPIRH-TAALI---EEYVALAGGRAA   80 (370)
T ss_pred             HHHHHHHHHHhcCCCEEEEEcCCcc-----------ccCCHHHHhcCCCEEEEeCCHHH-HHHHH---HHHhhhhcCCCC
Confidence            799999999964 889999998522           23467788899999999999854 56665   777765   789


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHH-HHhcCceEEEecCC-HHHHHHHHHHHHHhcCCeEEeCCc
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTK-AAQEATLTFMVGGD-KSSLEKAKPILKCMGRNIVHCGDS  153 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~-~~~~~~~~~~~~g~-~~~~~~~~~l~~~~g~~~~~~g~~  153 (183)
                      +++|+|.++++......+.    +.+..|+. |||+|.+. ..-.+..++++... .+..+.++++++.+|.+++.+.+.
T Consensus        81 ~~iVtDVgSvK~~i~~~~~----~~~~~fVG~HPMaG~E~s~lf~g~~~iltp~~~~~~~~~v~~l~~~~Ga~v~~~~ae  156 (370)
T PRK08818         81 GQLWLDVTSIKQAPVAAML----ASQAEVVGLHPMTAPPKSPTLKGRVMVVCEARLQHWSPWVQSLCSALQAECVYATPE  156 (370)
T ss_pred             CeEEEECCCCcHHHHHHHH----hcCCCEEeeCCCCCCCCCcccCCCeEEEeCCCchhHHHHHHHHHHHcCCEEEEcCHH
Confidence            9999999999987776653    33567888 89999753 33356666776543 344678999999999999999998


Q ss_pred             chHHHHHHHHHHHHHHHHH
Q psy755          154 GNGQVAKLCNNMLLGVTMM  172 (183)
Q Consensus       154 g~a~~~k~~~~~~~~~~~~  172 (183)
                      ..-..+..++.+-+..++.
T Consensus       157 eHD~~~A~vS~LsHl~~l~  175 (370)
T PRK08818        157 HHDRVMALVQAMVHATHLA  175 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            8888888887554444443

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=99.65  E-value=9.2e-15  Score=112.27  Aligned_cols=175  Identities=18%  Similarity=0.313  Sum_probs=137.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--------------CCcccCCHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--------------GANMALSLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--------------g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||++||..|+++||+|++|.|+++-.+++...              ++..++++.++++++|+|++++|. +.++.++  
T Consensus        12 wGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avPs-~~~r~v~--   88 (329)
T COG0240          12 WGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVPS-QALREVL--   88 (329)
T ss_pred             HHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECCh-HHHHHHH--
Confidence            79999999999999999999999988887663              245567899999999999999988 7789988  


Q ss_pred             CccccccCCCCcEEEeccCCC-chhHHHHHHHHHhc-C---CcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHH
Q psy755           67 SDGILKHAKPGVIVIDSSTVD-PQVPQTLSNLAREK-Q---ITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILK  141 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~~~-~~~~~~~~~~~~~~-g---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~  141 (183)
                       +++.+.++++.+++.++... +.+.+.+.+.+.+. +   +-++..|-+..+......+.+.+.+.+.+..++++++|+
T Consensus        89 -~~l~~~l~~~~~iv~~sKGie~~t~~l~seii~e~l~~~~~~vLSGPs~A~EVa~g~pta~~vas~d~~~a~~v~~~f~  167 (329)
T COG0240          89 -RQLKPLLLKDAIIVSATKGLEPETGRLLSEIIEEELPDNPIAVLSGPSFAKEVAQGLPTAVVVASNDQEAAEKVQALFS  167 (329)
T ss_pred             -HHHhhhccCCCeEEEEeccccCCCcchHHHHHHHHcCCCeEEEEECccHHHHHhcCCCcEEEEecCCHHHHHHHHHHhC
Confidence             88888999999999999663 54555555555543 3   345555655555555557766777788888889999999


Q ss_pred             HhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy755          142 CMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG  181 (183)
Q Consensus       142 ~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~  181 (183)
                      .=-.+++...+.-..+..-.+.|.+.-.  +++.+++.++
T Consensus       168 ~~~Frvy~~~Dv~GveigGAlKNViAIA--~Gi~dGlg~G  205 (329)
T COG0240         168 SPYFRVYTSTDVIGVEIGGALKNVIAIA--AGIADGLGLG  205 (329)
T ss_pred             CCcEEEEecCchhhhHHHHHHHHHHHHH--HHHHHHhhcC
Confidence            8777788777877688888888887766  7777777665

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=99.64  E-value=4.6e-15  Score=115.63  Aligned_cols=163  Identities=19%  Similarity=0.257  Sum_probs=109.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-----C--------------CcccCCHHHHhccCCEEEEecCChHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-----G--------------ANMALSLSTLASGAEFIISMLPASQDVL   61 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-----g--------------~~~~~~~~~~~~~adiVi~~vp~~~~~~   61 (183)
                      ||.+||..|++.|++|++||+++++.+++.+.     +              +..++++.+++++||+||+|+|+..+.+
T Consensus        15 mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlVi~av~~~~~~~   94 (311)
T PRK06130         15 MGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLVIEAVPEKLELK   94 (311)
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEEEEeccCcHHHH
Confidence            79999999999999999999999887766541     1              2345677788899999999999876544


Q ss_pred             HHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccCCHHHHhcCceEEEecC---CHHHHH
Q psy755           62 DAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSGGTKAAQEATLTFMVGG---DKSSLE  134 (183)
Q Consensus        62 ~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~  134 (183)
                      ..++  .++.+.++++++|+..+++.+  ...+.+.+...    +.||.+.|..        +..+.++.+   +++.++
T Consensus        95 ~~v~--~~l~~~~~~~~ii~s~tsg~~--~~~l~~~~~~~~~~ig~h~~~p~~~--------~~l~~i~~g~~t~~~~~~  162 (311)
T PRK06130         95 RDVF--ARLDGLCDPDTIFATNTSGLP--ITAIAQAVTRPERFVGTHFFTPADV--------IPLVEVVRGDKTSPQTVA  162 (311)
T ss_pred             HHHH--HHHHHhCCCCcEEEECCCCCC--HHHHHhhcCCcccEEEEccCCCCcc--------CceEEEeCCCCCCHHHHH
Confidence            4332  667776766666654444433  33555544321    3343332221        123344443   689999


Q ss_pred             HHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          135 KAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       135 ~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      .++++++.+|..++++++...+.   +++|++.    ..++|++.+.+
T Consensus       163 ~v~~l~~~~G~~~v~~~~d~~G~---i~nr~~~----~~~~Ea~~l~~  203 (311)
T PRK06130        163 TTMALLRSIGKRPVLVKKDIPGF---IANRIQH----ALAREAISLLE  203 (311)
T ss_pred             HHHHHHHHcCCEEEEEcCCCCCc---HHHHHHH----HHHHHHHHHHH
Confidence            99999999999999998644444   5555543    56778877654

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=99.63  E-value=4.7e-15  Score=106.95  Aligned_cols=165  Identities=19%  Similarity=0.243  Sum_probs=113.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEc-CCchhHHHHHHc-C-CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYD-KNTDASQTLAKE-G-ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~-~~~~~~~~~~~~-g-~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||.++|++|++.||+|.+.+ |++++.+.+.+. + .....+++++++.+|+||++||. ..+..++   +++.+.+. |
T Consensus        12 iG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~-~a~~~v~---~~l~~~~~-~   86 (211)
T COG2085          12 IGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF-EAIPDVL---AELRDALG-G   86 (211)
T ss_pred             HHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH-HHHHhHH---HHHHHHhC-C
Confidence            69999999999999999985 555555554443 2 23456899999999999999998 4566766   78887775 9


Q ss_pred             cEEEeccCCC---------------chhHHHHHHHHHhc----CCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHH
Q psy755           78 VIVIDSSTVD---------------PQVPQTLSNLAREK----QITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKP  138 (183)
Q Consensus        78 ~iiid~s~~~---------------~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  138 (183)
                      ++|||.++..               .+..+.+.+.++..    .++.+.+..............+++++.+.++.+.+.+
T Consensus        87 KIvID~tnp~~~~~~~~~~~~~~~~~saae~va~~lp~akVVkAFn~i~a~~l~~~~~~~~~~~v~vagDD~~Ak~~v~~  166 (211)
T COG2085          87 KIVIDATNPIEVNGEPGDLYLVPSEGSAAEIVAKLLPGAKVVKAFNTIPAAVLADLAKPGGRRDVLVAGDDAEAKAVVAE  166 (211)
T ss_pred             eEEEecCCCccccCCccccccCCCCCcHHHHHHHHCCCcchhhhhcccCHHHhccCCCcCCceeEEEecCcHHHHHHHHH
Confidence            9999999852               11223333333322    1222222211111111123345667778889999999


Q ss_pred             HHHHhcCCeEEeCCcchHHHHHHHHHHHHHHH
Q psy755          139 ILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVT  170 (183)
Q Consensus       139 l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~  170 (183)
                      |.+.+|.+++.+|++..+.-+..+...+...+
T Consensus       167 L~~~iG~~~ld~G~L~~a~~le~~t~l~i~~~  198 (211)
T COG2085         167 LAEDIGFRPLDAGPLENARILEPGTPLLINLA  198 (211)
T ss_pred             HHHhcCcceeecccccccccccccchHHHHHh
Confidence            99999999999999999988887776665544

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=99.63  E-value=4.9e-15  Score=114.43  Aligned_cols=165  Identities=16%  Similarity=0.247  Sum_probs=115.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH--------------cC-------------CcccCCHHHHhccCCEEEEe
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK--------------EG-------------ANMALSLSTLASGAEFIISM   53 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~--------------~g-------------~~~~~~~~~~~~~adiVi~~   53 (183)
                      ||.+||..|+++|++|++||++++.++++.+              .+             +...++. +.+++||+||++
T Consensus        14 mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~aDlViea   92 (291)
T PRK06035         14 MGQGIAQVFARTGYDVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTSTSY-ESLSDADFIVEA   92 (291)
T ss_pred             HHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEeeCCH-HHhCCCCEEEEc
Confidence            8999999999999999999999988764322              11             1233344 567899999999


Q ss_pred             cCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEe-ecccCCHHHHhcCceEEEecC
Q psy755           54 LPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLD-APVSGGTKAAQEATLTFMVGG  128 (183)
Q Consensus        54 vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~-~~~~~~~~~~~~~~~~~~~~g  128 (183)
                      +|+...++..++  +++.+.++++++++..++..  ....+.+.+...    |.||++ +++.+..+ ...++     ..
T Consensus        93 v~e~~~~k~~~~--~~l~~~~~~~~il~S~tsg~--~~~~la~~~~~~~r~ig~hf~~P~~~~~~vE-v~~g~-----~T  162 (291)
T PRK06035         93 VPEKLDLKRKVF--AELERNVSPETIIASNTSGI--MIAEIATALERKDRFIGMHWFNPAPVMKLIE-VVRAA-----LT  162 (291)
T ss_pred             CcCcHHHHHHHH--HHHHhhCCCCeEEEEcCCCC--CHHHHHhhcCCcccEEEEecCCCcccCccEE-EeCCC-----CC
Confidence            999876666554  67888888888887555443  334555554332    667777 45554432 11222     23


Q ss_pred             CHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          129 DKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       129 ~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      +++.++.+.++++.+|+.++++++.+....-|++.|++.-. +..+.|+
T Consensus       163 ~~e~~~~~~~~~~~lgk~~v~v~d~pgfv~nRl~~~~~~ea-~~~~~~g  210 (291)
T PRK06035        163 SEETFNTTVELSKKIGKIPIEVADVPGFFTTRFIEGWLLEA-IRSFEIG  210 (291)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEeCCCCCeeHHHHHHHHHHHH-HHHHHcC
Confidence            88999999999999999999999877677777777655444 3344443

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=99.61  E-value=1.5e-14  Score=111.11  Aligned_cols=138  Identities=15%  Similarity=0.239  Sum_probs=99.4

Q ss_pred             CcHHHHHHHHhCC----CcEEEEcCCch-hHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKNG----HDVIVYDKNTD-ASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g----~~V~~~~~~~~-~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||.+|+++|.++|    ++|++|+|+++ +.+.+... |+...+++.+++++||+||+++|+ +.+..++   +++.+.+
T Consensus        14 mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p-~~~~~vl---~~l~~~~   89 (279)
T PRK07679         14 IAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKP-KDVAEAL---IPFKEYI   89 (279)
T ss_pred             HHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCH-HHHHHHH---HHHHhhc
Confidence            7999999999998    78999999874 56766554 777777888989999999999987 5567776   7888888


Q ss_pred             CCCcEEEec-cCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCC---HHHHHHHHHHHHHhcCCeE
Q psy755           75 KPGVIVIDS-STVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGD---KSSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        75 ~~~~iiid~-s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~l~~~~g~~~~  148 (183)
                      +++++||++ ++..+.....   .++ .+.. +-.++...+.....+ .+++++++   ++.++.++++|+.+|..++
T Consensus        90 ~~~~liIs~~aGi~~~~l~~---~~~-~~~~-v~r~mPn~~~~~~~~-~t~~~~~~~~~~~~~~~v~~l~~~~G~~~~  161 (279)
T PRK07679         90 HNNQLIISLLAGVSTHSIRN---LLQ-KDVP-IIRAMPNTSAAILKS-ATAISPSKHATAEHIQTAKALFETIGLVSV  161 (279)
T ss_pred             CCCCEEEEECCCCCHHHHHH---HcC-CCCe-EEEECCCHHHHHhcc-cEEEeeCCCCCHHHHHHHHHHHHhCCcEEE
Confidence            889999997 5555554433   222 2222 333333333333333 46666654   6688999999999998655

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=99.60  E-value=1.5e-14  Score=107.40  Aligned_cols=162  Identities=17%  Similarity=0.251  Sum_probs=113.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--------CC---cccCCHHHHhccCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--------GA---NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--------g~---~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      ||++++..|+++|++|++|+|++++.+.+.+.        |.   ....+..+.++++|+||+++|. +.+..++   ++
T Consensus        12 mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~-~~~~~~l---~~   87 (219)
T TIGR01915        12 QGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPW-DHVLKTL---ES   87 (219)
T ss_pred             HHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCH-HHHHHHH---HH
Confidence            78999999999999999999999988766542        21   1224667788999999999987 5567776   66


Q ss_pred             ccccCCCCcEEEeccCCCchh---------------HHHHHHHHHhcCCcEEee------cccCCHHHHhcCceEEEecC
Q psy755           70 ILKHAKPGVIVIDSSTVDPQV---------------PQTLSNLAREKQITFLDA------PVSGGTKAAQEATLTFMVGG  128 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~---------------~~~~~~~~~~~g~~~~~~------~~~~~~~~~~~~~~~~~~~g  128 (183)
                      +.+.+. +++|+|+++..+.+               .+.+.+.++. +.+++.+      .+..+. ....+..+++++.
T Consensus        88 l~~~l~-~~vvI~~~ngi~~~~~~~~~~~~~~~~s~~e~l~~~~p~-~~~VVka~~~~~a~~~~~~-~~~~~~~~~v~Gd  164 (219)
T TIGR01915        88 LRDELS-GKLVISPVVPLASDGGKGARYLPPEEGSAAEQAAALLPE-TSRVVAAFHNLSAVLLQDV-DDEVDCDVLVCGD  164 (219)
T ss_pred             HHHhcc-CCEEEEeccCceecCCCCceecCCCCCcHHHHHHHhCCC-CCeEeeccccCCHHHhcCC-CCCCCCCEEEECC
Confidence            766664 58999998876531               1334444332 1233332      222221 1112344566777


Q ss_pred             CHHHHHHHHHHHHHh-cCCeEEeCCcchHHHHHHHHHHHHHH
Q psy755          129 DKSSLEKAKPILKCM-GRNIVHCGDSGNGQVAKLCNNMLLGV  169 (183)
Q Consensus       129 ~~~~~~~~~~l~~~~-g~~~~~~g~~g~a~~~k~~~~~~~~~  169 (183)
                      ++++.+.+.+|.+.+ |.+++++|++..+..+.....++...
T Consensus       165 d~~ak~~v~~L~~~~~G~~~vd~G~l~~a~~~e~~~~l~~~~  206 (219)
T TIGR01915       165 DEEAKEVVAELAGRIDGLRALDAGPLENAAIVESLTPLLINL  206 (219)
T ss_pred             CHHHHHHHHHHHHhcCCCCcccCCchhhHHHHHhHHHHHHHH
Confidence            788889999999999 99999999999998888877666544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=99.58  E-value=1.3e-13  Score=118.74  Aligned_cols=163  Identities=18%  Similarity=0.290  Sum_probs=125.0

Q ss_pred             CcHHHHHHHHhCC--CcEEEEcCCchhHHHHHHcCCc--ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNG--HDVIVYDKNTDASQTLAKEGAN--MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g--~~V~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||.++++.|.+.|  ++|++||+++++.+.+.+.|..  ...+..+++.++|+||+|+|. +.+..++   +.+.+.+++
T Consensus        14 mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~-~~~~~vl---~~l~~~~~~   89 (735)
T PRK14806         14 IGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPV-LAMEKVL---ADLKPLLSE   89 (735)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCH-HHHHHHH---HHHHHhcCC
Confidence            7999999999998  4899999999998888777764  345677888999999999987 5677877   788888889


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHH----HH----hcCceEEEec---CCHHHHHHHHHHHHHhc
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTK----AA----QEATLTFMVG---GDKSSLEKAKPILKCMG  144 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~----~~----~~~~~~~~~~---g~~~~~~~~~~l~~~~g  144 (183)
                      +.+|+|+++.+......+.+.+.....+|+. +|++|+..    .+    -.+..++++.   ++++..+.++++|+.+|
T Consensus        90 ~~ii~d~~svk~~~~~~l~~~~~~~~~r~~~~hPm~G~~~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G  169 (735)
T PRK14806         90 HAIVTDVGSTKGNVVDAARAVFGELPAGFVPGHPIAGSEKSGVHAANADLFRNHKVILTPLAETDPAALARVDRLWRAVG  169 (735)
T ss_pred             CcEEEEcCCCchHHHHHHHHhccccCCeEEecCCcCcCCcchhhhhhhHHhCCCeEEEECCCCCCHHHHHHHHHHHHHcC
Confidence            9999999999988888888776555667665 89886542    11    1233344443   46678889999999999


Q ss_pred             CCeEEeCCcchHHHHHHHHHHHH
Q psy755          145 RNIVHCGDSGNGQVAKLCNNMLL  167 (183)
Q Consensus       145 ~~~~~~g~~g~a~~~k~~~~~~~  167 (183)
                      ..++++++......+-.++..-.
T Consensus       170 ~~~~~~~~~~hD~~~a~~~~~ph  192 (735)
T PRK14806        170 ADVLHMDVAHHDEVLAATSHLPH  192 (735)
T ss_pred             CEEEEcCHHHHhHHHHHhcchHH
Confidence            99988887555555555554443

>PRK07680 late competence protein ComER; Validated

Probab=99.57  E-value=1.3e-13  Score=105.58  Aligned_cols=141  Identities=12%  Similarity=0.219  Sum_probs=103.5

Q ss_pred             CcHHHHHHHHhCCC----cEEEEcCCchhHHHHHHc--CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKNGH----DVIVYDKNTDASQTLAKE--GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g~----~V~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||.+++..|.+.|+    +|.+|+|++++.+.+.+.  ++....++.+++.++|+||+++|+ +.+..++   +++.+.+
T Consensus        11 mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p-~~~~~vl---~~l~~~l   86 (273)
T PRK07680         11 MGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKP-LDIYPLL---QKLAPHL   86 (273)
T ss_pred             HHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCH-HHHHHHH---HHHHhhc
Confidence            79999999999984    799999999988877664  566677888888999999999975 6688887   7888888


Q ss_pred             CCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEec--CCHHHHHHHHHHHHHhcCCeEEeCC
Q psy755           75 KPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVG--GDKSSLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus        75 ~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~g~~~~~~g~  152 (183)
                      +++++|+++++..  ....+.+.+.....++++    +.+.....|...+..+  .+++..+.++++|+.+|. ++++.+
T Consensus        87 ~~~~~iis~~ag~--~~~~L~~~~~~~~~r~~p----~~~~~~~~G~t~~~~g~~~~~~~~~~~~~ll~~~G~-~~~i~e  159 (273)
T PRK07680         87 TDEHCLVSITSPI--SVEQLETLVPCQVARIIP----SITNRALSGASLFTFGSRCSEEDQQKLERLFSNIST-PLVIEE  159 (273)
T ss_pred             CCCCEEEEECCCC--CHHHHHHHcCCCEEEECC----ChHHHHhhccEEEeeCCCCCHHHHHHHHHHHHcCCC-EEEECh
Confidence            8899999999755  344555554422223332    3444455676544444  356777899999999995 445543

>PLN02712 arogenate dehydrogenase

Probab=99.57  E-value=1.4e-13  Score=116.42  Aligned_cols=162  Identities=14%  Similarity=0.197  Sum_probs=121.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCcccc-ccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGIL-KHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~-~~l~~~~   78 (183)
                      ||+++|+.|.+.|++|++|||+... +.+.+.|+....++.+++ .++|+||+|+|. ..+..++   +++. +.+++++
T Consensus        63 mG~slA~~L~~~G~~V~~~dr~~~~-~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~-~~~~~vl---~~l~~~~l~~g~  137 (667)
T PLN02712         63 YGQFLAKTLISQGHTVLAHSRSDHS-LAARSLGVSFFLDPHDLCERHPDVILLCTSI-ISTENVL---KSLPLQRLKRNT  137 (667)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHcCCEEeCCHHHHhhcCCCEEEEcCCH-HHHHHHH---HhhhhhcCCCCe
Confidence            7999999999999999999998554 455566877777888855 569999999996 5678877   6665 5688899


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHH--hcCceEEEec---CC-H---HHHHHHHHHHHHhcCCeE
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAA--QEATLTFMVG---GD-K---SSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~--~~~~~~~~~~---g~-~---~~~~~~~~l~~~~g~~~~  148 (183)
                      +|+|+++++......+.+.++. +..|+. |||+|.....  -.+...++.+   ++ .   +..+.+.++|+.+|.+++
T Consensus       138 iVvDv~SvK~~~~~~l~~~l~~-~~~~v~~HPMaG~e~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~lGa~v~  216 (667)
T PLN02712        138 LFVDVLSVKEFAKNLLLDYLPE-DFDIICSHPMFGPQSAKHGWDGLRFVYEKVRIGNEELRVSRCKSFLEVFEREGCKMV  216 (667)
T ss_pred             EEEECCCCcHHHHHHHHHhcCC-CCeEEeeCCcCCCccccchhccCcEEEeeccCCCccccHHHHHHHHHHHHHcCCEEE
Confidence            9999999998777667766543 566777 8999865321  1222234442   22 2   234567799999999999


Q ss_pred             EeCCcchHHHHHHHHHHHHH
Q psy755          149 HCGDSGNGQVAKLCNNMLLG  168 (183)
Q Consensus       149 ~~g~~g~a~~~k~~~~~~~~  168 (183)
                      .+.+...-.++-.++.+-+.
T Consensus       217 ~ms~eeHD~~~A~vshLpH~  236 (667)
T PLN02712        217 EMSCTEHDKYAAESQFITHT  236 (667)
T ss_pred             EeCHHHHHHHHHHHHHHHHH
Confidence            99988888888888766654

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=99.54  E-value=9.8e-14  Score=106.76  Aligned_cols=166  Identities=19%  Similarity=0.245  Sum_probs=111.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHH-----------HHHcC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQT-----------LAKEG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~-----------~~~~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||.+||..|+++|++|++||++++++++           +.+.|             +..+++.. .+++||+||+|+|+
T Consensus        14 mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~~-~~~~aDlVi~av~e   92 (282)
T PRK05808         14 MGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLD-DLKDADLVIEAATE   92 (282)
T ss_pred             HHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH-HhccCCeeeecccc
Confidence            7999999999999999999999998753           22333             22244554 47899999999998


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEe-ecccCCHHHHhcCceEEEecCCHH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLD-APVSGGTKAAQEATLTFMVGGDKS  131 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~  131 (183)
                      ...++..++  +++.+.++++++|+..+++.+..  .+.+.+...    +.||.+ +++.+..+      .+--.+.+++
T Consensus        93 ~~~~k~~~~--~~l~~~~~~~~il~s~ts~~~~~--~la~~~~~~~r~ig~h~~~P~~~~~~ve------v~~g~~t~~e  162 (282)
T PRK05808         93 NMDLKKKIF--AQLDEIAKPEAILATNTSSLSIT--ELAAATKRPDKVIGMHFFNPVPVMKLVE------IIRGLATSDA  162 (282)
T ss_pred             cHHHHHHHH--HHHHhhCCCCcEEEECCCCCCHH--HHHHhhCCCcceEEeeccCCcccCccEE------EeCCCCCCHH
Confidence            777775444  77888888898885444443333  445544321    444444 22222211      1111246889


Q ss_pred             HHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy755          132 SLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAM  178 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~  178 (183)
                      ..+.+.++++.+|+.++++++ ..+.....+.-.+....+..+.|+.
T Consensus       163 ~~~~~~~l~~~lGk~pv~~~d-~~g~i~~Ri~~~~~~ea~~~~~~gv  208 (282)
T PRK05808        163 THEAVEALAKKIGKTPVEVKN-APGFVVNRILIPMINEAIFVLAEGV  208 (282)
T ss_pred             HHHHHHHHHHHcCCeeEEecC-ccChHHHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999964 4566766666666666666666554

>PLN02712 arogenate dehydrogenase

Probab=99.53  E-value=3.3e-13  Score=114.19  Aligned_cols=160  Identities=16%  Similarity=0.215  Sum_probs=115.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhc-cCCEEEEecCChHHHHHHhcCCccccc-cCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS-GAEFIISMLPASQDVLDAYDGSDGILK-HAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~adiVi~~vp~~~~~~~v~~~~~~l~~-~l~~~~   78 (183)
                      ||.++|++|.+.|++|++|||+... +.+.+.|+....++.+++. .+|+||+|+|. ..+..++   +++.. .+++|+
T Consensus       380 mG~slA~~L~~~G~~V~~~dr~~~~-~~a~~~Gv~~~~~~~el~~~~aDvVILavP~-~~~~~vi---~~l~~~~lk~g~  454 (667)
T PLN02712        380 FGQFLAKTMVKQGHTVLAYSRSDYS-DEAQKLGVSYFSDADDLCEEHPEVILLCTSI-LSTEKVL---KSLPFQRLKRST  454 (667)
T ss_pred             HHHHHHHHHHHCcCEEEEEECChHH-HHHHHcCCeEeCCHHHHHhcCCCEEEECCCh-HHHHHHH---HHHHHhcCCCCc
Confidence            7999999999999999999999654 5555667766778888775 59999999996 6677776   66654 578899


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEE-eecccCCHHHHhcC--ceE-----EEecCCHH---HHHHHHHHHHHhcCCe
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFL-DAPVSGGTKAAQEA--TLT-----FMVGGDKS---SLEKAKPILKCMGRNI  147 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~--~~~-----~~~~g~~~---~~~~~~~l~~~~g~~~  147 (183)
                      +|+|+++++......+.+.+ ..+.+|+ .||++|..... .|  ...     .+++++.+   ..+.+.++|+.+|.++
T Consensus       455 ivvDv~SvK~~~~~~~~~~l-~~~~~~v~~HPm~G~e~~~-~G~~~~~~lf~~~~v~~~~~~~~~~~~l~~l~~~lGa~v  532 (667)
T PLN02712        455 LFVDVLSVKEFPRNLFLQHL-PQDFDILCTHPMFGPESGK-NGWNNLAFVFDKVRIGSDDRRVSRCDSFLDIFAREGCRM  532 (667)
T ss_pred             EEEECCCccHHHHHHHHHhc-cCCCceEeeCCCCCccccc-cchhhhhhhccCcEeCCCcchHHHHHHHHHHHHHcCCEE
Confidence            99999999865555555544 3477888 59999966431 11  011     12234443   3455679999999999


Q ss_pred             EEeCCcchHHHHHHHHHHHH
Q psy755          148 VHCGDSGNGQVAKLCNNMLL  167 (183)
Q Consensus       148 ~~~g~~g~a~~~k~~~~~~~  167 (183)
                      +.+.+......+-.++.+..
T Consensus       533 v~ms~eeHD~~~A~vShLpH  552 (667)
T PLN02712        533 VEMSCAEHDWHAAGSQFITH  552 (667)
T ss_pred             EEeCHHHHHHHHHHHHHHHH
Confidence            99998666666665554443

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=99.53  E-value=7.6e-13  Score=101.13  Aligned_cols=139  Identities=14%  Similarity=0.184  Sum_probs=105.9

Q ss_pred             CcHHHHHHHHhCCC----cEEEEcCCchhHHHHHH-cCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH----DVIVYDKNTDASQTLAK-EGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~----~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||.+|+++|.+.|+    +|++|||++++.+.+.+ .|+..++++.+++++||+||+|+|+ +.+..++   +++.+.++
T Consensus        13 MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP-~~~~~vl---~~l~~~~~   88 (272)
T PRK12491         13 MGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKP-DLYSSVI---NQIKDQIK   88 (272)
T ss_pred             HHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeCh-HHHHHHH---HHHHHhhc
Confidence            89999999999885    69999999999888875 6776777888889999999999986 7889988   78888888


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecC--CHHHHHHHHHHHHHhcCCe
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGG--DKSSLEKAKPILKCMGRNI  147 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~g~~~  147 (183)
                      ++++||+.-...+..  .+.+.+.. ..+ +-..|...+.....|...+..+.  +++..+.++++|+.+|...
T Consensus        89 ~~~lvISi~AGi~i~--~l~~~l~~-~~~-vvR~MPN~~~~vg~g~t~~~~~~~~~~~~~~~v~~lf~~~G~~~  158 (272)
T PRK12491         89 NDVIVVTIAAGKSIK--STENEFDR-KLK-VIRVMPNTPVLVGEGMSALCFNEMVTEKDIKEVLNIFNIFGQTE  158 (272)
T ss_pred             CCcEEEEeCCCCcHH--HHHHhcCC-CCc-EEEECCChHHHHcCceEEEEeCCCCCHHHHHHHHHHHHcCCCEE
Confidence            888999887665554  44444432 112 33456666777777764454432  4567789999999999853

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=99.53  E-value=1.5e-13  Score=108.43  Aligned_cols=171  Identities=20%  Similarity=0.257  Sum_probs=118.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-----------------ccCCHHHHhccCCEEEEecCChHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-----------------MALSLSTLASGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-----------------~~~~~~~~~~~adiVi~~vp~~~~~~~v   63 (183)
                      ||..+|..|+++|++|++|+|++. .+.+.+.|..                 ..++. +.+.++|+||+++|.++ ...+
T Consensus        13 mG~~~A~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vil~vk~~~-~~~~   89 (341)
T PRK08229         13 IGCYLGGRLAAAGADVTLIGRARI-GDELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATADLVLVTVKSAA-TADA   89 (341)
T ss_pred             HHHHHHHHHHhcCCcEEEEecHHH-HHHHHhcCceeecCCCcceecccceeEeccCh-hhccCCCEEEEEecCcc-hHHH
Confidence            799999999999999999999764 3555554432                 12233 55689999999998854 5666


Q ss_pred             hcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEee--c---ccCCHHHH---hcCceEEEecCCHHHHHH
Q psy755           64 YDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDA--P---VSGGTKAA---QEATLTFMVGGDKSSLEK  135 (183)
Q Consensus        64 ~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~--~---~~~~~~~~---~~~~~~~~~~g~~~~~~~  135 (183)
                      +   +.+.+.++++++|++++++... ...+.+.+.+  .+++.+  +   +..++...   ..+++.+  + +.+.+++
T Consensus        90 ~---~~l~~~~~~~~iii~~~nG~~~-~~~l~~~~~~--~~~~~g~~~~~~~~~~pg~~~~~~~g~l~~--~-~~~~~~~  160 (341)
T PRK08229         90 A---AALAGHARPGAVVVSFQNGVRN-ADVLRAALPG--ATVLAGMVPFNVISRGPGAFHQGTSGALAI--E-ASPALRP  160 (341)
T ss_pred             H---HHHHhhCCCCCEEEEeCCCCCc-HHHHHHhCCC--CcEEEEEEEEEEEecCCceEEecCCCceEe--c-CCchHHH
Confidence            6   7888888899999988765433 3345544433  233332  1   22222222   2344333  2 2345688


Q ss_pred             HHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHH--------------------HHHHHHHhcccC
Q psy755          136 AKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTM--------------------MGVAEAMNLGVK  183 (183)
Q Consensus       136 ~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~--------------------~~~~E~~~~~~~  183 (183)
                      ++++|+..|.++.+.++.+.+.+.|++.|.+.....                    ..+.|++.++++
T Consensus       161 ~~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~E~~~va~a  228 (341)
T PRK08229        161 FAAAFARAGLPLVTHEDMRAVQWAKLLLNLNNAVNALSGLPLKEELAQRSYRRCLALAQREALRVLKA  228 (341)
T ss_pred             HHHHHHhcCCCceecchhHHHHHHHHHHHhccHHHHHhCCchHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999997544442                    678888888764

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=99.52  E-value=1.3e-14  Score=104.40  Aligned_cols=140  Identities=16%  Similarity=0.302  Sum_probs=94.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------c-------------CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------E-------------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||..||..++.+|++|.+||++++..++..+           .             .+...++++++. +||+||.++|.
T Consensus        10 mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~dl~~~~-~adlViEai~E   88 (180)
T PF02737_consen   10 MGRGIAALFARAGYEVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISFTTDLEEAV-DADLVIEAIPE   88 (180)
T ss_dssp             HHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEEESSGGGGC-TESEEEE-S-S
T ss_pred             HHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhcccccCHHHHh-hhheehhhccc
Confidence            8999999999999999999999987654322           1             245677888877 99999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEe---cCCHH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMV---GGDKS  131 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~  131 (183)
                      ..+.|.-+|  .++.+..+++.++...|++.+.....-.-..+++  |.||.+.|-..        +++-++   ..+++
T Consensus        89 ~l~~K~~~~--~~l~~~~~~~~ilasnTSsl~i~~la~~~~~p~R~ig~Hf~~P~~~~--------~lVEvv~~~~T~~~  158 (180)
T PF02737_consen   89 DLELKQELF--AELDEICPPDTILASNTSSLSISELAAALSRPERFIGMHFFNPPHLM--------PLVEVVPGPKTSPE  158 (180)
T ss_dssp             SHHHHHHHH--HHHHCCS-TTSEEEE--SSS-HHHHHTTSSTGGGEEEEEE-SSTTT----------EEEEEE-TTS-HH
T ss_pred             cHHHHHHHH--HHHHHHhCCCceEEecCCCCCHHHHHhccCcCceEEEEecccccccC--------ceEEEeCCCCCCHH
Confidence            999988776  7888889999998877776666542222112222  56666532211        122222   35889


Q ss_pred             HHHHHHHHHHHhcCCeEEeC
Q psy755          132 SLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g  151 (183)
                      .++.+.++++.+|+.++.+.
T Consensus       159 ~~~~~~~~~~~~gk~pv~v~  178 (180)
T PF02737_consen  159 TVDRVRALLRSLGKTPVVVK  178 (180)
T ss_dssp             HHHHHHHHHHHTT-EEEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEec
Confidence            99999999999999998774

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]

Probab=99.51  E-value=2.7e-13  Score=104.05  Aligned_cols=164  Identities=17%  Similarity=0.206  Sum_probs=117.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------cC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------EG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||+.||..++..||+|+++|++++.+++...           .|             +....++. .+++||+||.+++.
T Consensus        14 MG~gIA~~~A~~G~~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~~-~l~~~DlVIEAv~E   92 (307)
T COG1250          14 MGAGIAAVFALAGYDVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDLA-ALKDADLVIEAVVE   92 (307)
T ss_pred             hhHHHHHHHhhcCCceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCchh-HhccCCEEEEeccc
Confidence            8999999999988999999999876554432           11             23333443 57899999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeec-ccCCHHHHhcCceEEEec---CCH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAP-VSGGTKAAQEATLTFMVG---GDK  130 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~-~~~~~~~~~~~~~~~~~~---g~~  130 (183)
                      ...+++-+|  +++.+..+++.++-..||+.|.+..+-....+++  |.||.+.| ++.         ++-++.   .++
T Consensus        93 ~levK~~vf--~~l~~~~~~~aIlASNTSsl~it~ia~~~~rper~iG~HFfNP~~~m~---------LVEvI~g~~T~~  161 (307)
T COG1250          93 DLELKKQVF--AELEALAKPDAILASNTSSLSITELAEALKRPERFIGLHFFNPVPLMP---------LVEVIRGEKTSD  161 (307)
T ss_pred             cHHHHHHHH--HHHHhhcCCCcEEeeccCCCCHHHHHHHhCCchhEEEEeccCCCCcce---------eEEEecCCCCCH
Confidence            999998777  7888888888888766666666643333322333  77888743 332         222222   478


Q ss_pred             HHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          131 SSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       131 ~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      +.++.+.++.+.+|+.++...+ -.+.++..+.-.+....+..+.|+
T Consensus       162 e~~~~~~~~~~~igK~~vv~~D-~pGFi~NRil~~~~~eA~~l~~eG  207 (307)
T COG1250         162 ETVERVVEFAKKIGKTPVVVKD-VPGFIVNRLLAALLNEAIRLLEEG  207 (307)
T ss_pred             HHHHHHHHHHHHcCCCCEeecC-CCceehHhHHHHHHHHHHHHHHhC
Confidence            9999999999999987744444 557888888877777766666665

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=99.49  E-value=3.8e-12  Score=97.18  Aligned_cols=140  Identities=16%  Similarity=0.238  Sum_probs=100.8

Q ss_pred             CcHHHHHHHHhCC---CcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNG---HDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g---~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||.+++..|.+.|   ++|.+|+|++++.+++.+. |+...+++.+.+.++|+||+|+|+ ..++.++   +.+.+.+  
T Consensus        13 mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~-~~~~~v~---~~l~~~~--   86 (267)
T PRK11880         13 MASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP-QVMEEVL---SELKGQL--   86 (267)
T ss_pred             HHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH-HHHHHHH---HHHHhhc--
Confidence            7899999999998   7899999999998888775 776777888888999999999987 5578877   7777766  


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEec--CCHHHHHHHHHHHHHhcCCeEEeC
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVG--GDKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      +++|++++++.+..  .+.+.++ .+.+++. .+...+.....+...+..+  .+++.++.++.+|+.+|..+ ++.
T Consensus        87 ~~~vvs~~~gi~~~--~l~~~~~-~~~~iv~-~~P~~p~~~~~~~~~i~~~~~~~~~~~~~v~~l~~~lG~~~-~~~  158 (267)
T PRK11880         87 DKLVVSIAAGVTLA--RLERLLG-ADLPVVR-AMPNTPALVGAGMTALTANALVSAEDRELVENLLSAFGKVV-WVD  158 (267)
T ss_pred             CCEEEEecCCCCHH--HHHHhcC-CCCcEEE-ecCCchHHHcCceEEEecCCCCCHHHHHHHHHHHHhCCeEE-EEC
Confidence            57888887766543  3444332 3445555 1223344444444334433  37888899999999999744 444

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=99.47  E-value=5.1e-13  Score=114.23  Aligned_cols=165  Identities=12%  Similarity=0.082  Sum_probs=117.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------c-------------CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------E-------------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||..||..++.+|++|++||++++.+++..+           .             .+..+++. +.+++||+||.++|.
T Consensus       324 mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~aDlViEav~E  402 (715)
T PRK11730        324 MGGGIAYQSASKGVPVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRPTLDY-AGFERVDVVVEAVVE  402 (715)
T ss_pred             hHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH-HHhcCCCEEEecccC
Confidence            8999999999999999999999987654322           1             23444555 447899999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEe---cCCHH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMV---GGDKS  131 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~  131 (183)
                      ...+|.-+|  .++.+..+++.++...|++.|.+..+-.-..+++  |.||.+.|...        +++-++   ..+++
T Consensus       403 ~l~~K~~vf--~~l~~~~~~~~ilasNTSsl~i~~la~~~~~p~r~~g~Hff~P~~~~--------~lVEvv~g~~T~~~  472 (715)
T PRK11730        403 NPKVKAAVL--AEVEQKVREDTILASNTSTISISLLAKALKRPENFCGMHFFNPVHRM--------PLVEVIRGEKTSDE  472 (715)
T ss_pred             cHHHHHHHH--HHHHhhCCCCcEEEEcCCCCCHHHHHhhcCCCccEEEEecCCccccc--------ceEEeeCCCCCCHH
Confidence            999998877  7888899999998877777666643322211222  56666633211        122222   24789


Q ss_pred             HHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          132 SLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      .++.+.++++.+|+.++.+.+ ..|.++..+...+....+..+.|+
T Consensus       473 ~~~~~~~~~~~lgk~pv~v~d-~pGfv~nRi~~~~~~ea~~lv~~G  517 (715)
T PRK11730        473 TIATVVAYASKMGKTPIVVND-CPGFFVNRVLFPYFAGFSQLLRDG  517 (715)
T ss_pred             HHHHHHHHHHHhCCceEEecC-cCchhHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999999864 667888777766665555555443

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=99.45  E-value=4e-12  Score=99.80  Aligned_cols=175  Identities=16%  Similarity=0.165  Sum_probs=118.7

Q ss_pred             CcHHHHHHHHhCC--------CcEEEEcC-----CchhHHHHHHc--------C------CcccCCHHHHhccCCEEEEe
Q psy755            1 MGSHMARNLLKNG--------HDVIVYDK-----NTDASQTLAKE--------G------ANMALSLSTLASGAEFIISM   53 (183)
Q Consensus         1 mG~~iA~~l~~~g--------~~V~~~~~-----~~~~~~~~~~~--------g------~~~~~~~~~~~~~adiVi~~   53 (183)
                      ||++||..|+++|        ++|.+|.|     +++-.+.+...        +      +..+++++++++++|+||++
T Consensus        10 wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~eal~~ADiIIlA   89 (342)
T TIGR03376        10 WGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEAAKGADILVFV   89 (342)
T ss_pred             HHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHHHhcCCEEEEE
Confidence            6999999999999        99999998     34434444321        1      23456888999999999999


Q ss_pred             cCChHHHHHHhcCCccccccCCCCcEEEeccCCCc-h--hHHHHHHHHHh---cCCcEEeecccCCHHHHhcCceEEEec
Q psy755           54 LPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDP-Q--VPQTLSNLARE---KQITFLDAPVSGGTKAAQEATLTFMVG  127 (183)
Q Consensus        54 vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~-~--~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~  127 (183)
                      +|+ +.++.++   +.+.++++++++++.++.... .  +...+.+.+.+   ..+.++..|.+...........+.+.+
T Consensus        90 VPs-~~i~~vl---~~l~~~l~~~~~iVs~tKGie~~~~~~~~~se~i~e~l~~~~~~lsGP~~A~Eva~~~pt~~~ia~  165 (342)
T TIGR03376        90 IPH-QFLEGIC---KQLKGHVKPNARAISCIKGLEVSKDGVKLLSDIIEEELGIPCGVLSGANLANEVAKEKFSETTVGY  165 (342)
T ss_pred             CCh-HHHHHHH---HHHHhhcCCCCEEEEEeCCcccCCCcCccHHHHHHHHhCCCeEEeeCcchHHHHHcCCCceEEEEe
Confidence            987 7788887   889999988999998886532 2  22233333332   223334455544444444455555666


Q ss_pred             CC----HHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy755          128 GD----KSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG  181 (183)
Q Consensus       128 g~----~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~  181 (183)
                      .+    .+..+.++++|+.=-.+++...|.-..+..-.+.|.+.-.  +++.+++.++
T Consensus       166 ~~~~~~~~~a~~~~~lf~~~~frv~~s~Dv~GvEl~galKNv~AIa--~Gi~~Gl~~g  221 (342)
T TIGR03376       166 RDPADFDVDARVLKALFHRPYFRVNVVDDVAGVEIAGALKNVVAIA--AGFVDGLGWG  221 (342)
T ss_pred             CCCcchHHHHHHHHHHhCCCCEEEEEcCCcccchhhHHHHHHHHHH--HHHHHhcCCC
Confidence            66    7777888888887666677777766677777777776655  5566555443

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=99.45  E-value=3e-12  Score=101.22  Aligned_cols=174  Identities=14%  Similarity=0.085  Sum_probs=122.0

Q ss_pred             CcHHHHHHHHhCC-------CcEEEEcCCch-----hHHHHHHc--------------CCcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNG-------HDVIVYDKNTD-----ASQTLAKE--------------GANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g-------~~V~~~~~~~~-----~~~~~~~~--------------g~~~~~~~~~~~~~adiVi~~v   54 (183)
                      ||++||..|+++|       ++|.+|.|+++     ..+.+...              ++..++++.++++++|+|+++|
T Consensus        22 wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~eav~~aDiIvlAV  101 (365)
T PTZ00345         22 WGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKEAVEDADLLIFVI  101 (365)
T ss_pred             HHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHHHHhcCCEEEEEc
Confidence            7999999999997       79999999986     24555432              2344678888999999999999


Q ss_pred             CChHHHHHHhcCCccccc--cCCCCcEEEeccCCCch-h------HHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEE
Q psy755           55 PASQDVLDAYDGSDGILK--HAKPGVIVIDSSTVDPQ-V------PQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFM  125 (183)
Q Consensus        55 p~~~~~~~v~~~~~~l~~--~l~~~~iiid~s~~~~~-~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  125 (183)
                      |+ +.++.++   +++.+  .++++.++|.++.+... +      ++.+.+.+. ..+.++..|.+...........+.+
T Consensus       102 Ps-q~l~~vl---~~l~~~~~l~~~~~iIS~aKGIe~~t~~~~~~sevi~e~l~-~~~~~LsGPs~A~Eva~~~pt~~vi  176 (365)
T PTZ00345        102 PH-QFLESVL---SQIKENNNLKKHARAISLTKGIIVENGKPVLCSDVIEEELG-IPCCALSGANVANDVAREEFSEATI  176 (365)
T ss_pred             Ch-HHHHHHH---HHhccccccCCCCEEEEEeCCcccCCCCcccHHHHHHHHhC-CCeEEEECCCHHHHHHcCCCcEEEE
Confidence            87 7789988   88888  77777788887765321 1      223333331 2233445554444444445666667


Q ss_pred             ecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy755          126 VGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG  181 (183)
Q Consensus       126 ~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~  181 (183)
                      .+.+.+..+.++++|..=-.+++...|.-..++.-.+.|.+.-.  +++++++.++
T Consensus       177 as~~~~~a~~~~~lf~~~~frvy~s~Dv~GvEl~galKNviAIa--~Gi~dGl~~G  230 (365)
T PTZ00345        177 GCEDKDDALIWQRLFDRPYFKINCVPDVIGVEVCGALKNIIALA--AGFCDGLGLG  230 (365)
T ss_pred             EeCCHHHHHHHHHHhCCCcEEEEEcCCcccchhhHHHHHHHHHH--HHHHHhcCCC
Confidence            77788888899999987777777777766677777777776655  6666665543

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=99.45  E-value=3.7e-12  Score=100.48  Aligned_cols=171  Identities=12%  Similarity=0.187  Sum_probs=120.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC---------------CcccCCHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG---------------ANMALSLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g---------------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||+++|..|+++| +|++|.|+++..+.+.+.+               +...+++.+.++++|+||+++|. +.++.++ 
T Consensus        18 ~G~alA~~La~~g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aDlVilavps-~~~~~vl-   94 (341)
T PRK12439         18 WGTTVASICARRG-PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCADVVVMGVPS-HGFRGVL-   94 (341)
T ss_pred             HHHHHHHHHHHCC-CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCCEEEEEeCH-HHHHHHH-
Confidence            7999999999999 6889999999888777532               12345677778899999999986 6688887 


Q ss_pred             CCccccccCCCCcEEEeccCCCchh-----HHHHHHHHHhcCCcEEeecccCCHHHHhcCc--eEEEecCCHHHHHHHHH
Q psy755           66 GSDGILKHAKPGVIVIDSSTVDPQV-----PQTLSNLAREKQITFLDAPVSGGTKAAQEAT--LTFMVGGDKSSLEKAKP  138 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~  138 (183)
                        +++.+.++++++++.+++.....     .+.+.+.+.......+..|-+..  ....+.  ..++.+.+++..+.+++
T Consensus        95 --~~i~~~l~~~~~vIsl~kGi~~~t~~~~se~i~~~l~~~~~~~l~GP~~a~--ev~~g~~t~~via~~~~~~~~~v~~  170 (341)
T PRK12439         95 --TELAKELRPWVPVVSLVKGLEQGTNMRMSQIIEEVLPGHPAGILAGPNIAR--EVAEGYAAAAVLAMPDQHLATRLSP  170 (341)
T ss_pred             --HHHHhhcCCCCEEEEEEeCCcCCCCCcHHHHHHHHcCCCCeEEEECCCHHH--HHHcCCCeEEEEEeCCHHHHHHHHH
Confidence              88999998888888888765442     22333332211111233332221  111233  33444557777789999


Q ss_pred             HHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy755          139 ILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL  180 (183)
Q Consensus       139 l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~  180 (183)
                      +|+.-+.+++...+.-..++.|.+.|.+...  +++.+++.+
T Consensus       171 lf~~~~~~v~~s~Di~gve~~~alkNv~aia--~G~~~g~~~  210 (341)
T PRK12439        171 LFRTRRFRVYTTDDVVGVEMAGALKNVFAIA--VGMGYSLGI  210 (341)
T ss_pred             HhCCCCEEEEEcCchHHHHHHHHHHHHHHHH--HHHHHHhcC
Confidence            9999899888888988899999999998876  566655544

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=99.45  E-value=8.4e-13  Score=112.76  Aligned_cols=165  Identities=13%  Similarity=0.127  Sum_probs=118.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------c-------------CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------E-------------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||..||..++.+|++|++||++++.+++..+           .             .+..+.+. +.+++||+||.++|.
T Consensus       324 mG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~aDlViEav~E  402 (714)
T TIGR02437       324 MGGGIAYQSASKGTPIVMKDINQHSLDLGLTEAAKLLNKQVERGRITPAKMAGVLNGITPTLSY-AGFDNVDIVVEAVVE  402 (714)
T ss_pred             HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEEeCCH-HHhcCCCEEEEcCcc
Confidence            8999999999999999999999988765332           1             23344455 446899999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEe---cCCHH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMV---GGDKS  131 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~  131 (183)
                      ...+|.-+|  .++.+..++++++...||+.+.+..+-.-..+++  |.||.+.|-..        +++-++   ..+++
T Consensus       403 ~l~~K~~vf--~~l~~~~~~~~ilasnTS~l~i~~ia~~~~~p~r~ig~Hff~P~~~~--------~lvEvv~g~~Ts~~  472 (714)
T TIGR02437       403 NPKVKAAVL--AEVEQHVREDAILASNTSTISISLLAKALKRPENFCGMHFFNPVHRM--------PLVEVIRGEKSSDE  472 (714)
T ss_pred             cHHHHHHHH--HHHHhhCCCCcEEEECCCCCCHHHHHhhcCCcccEEEEecCCCcccC--------ceEeecCCCCCCHH
Confidence            999988777  7888899999998877777666643322211222  66776633211        122222   24789


Q ss_pred             HHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          132 SLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      +++.+.++++.+|+.++.+.+ ..+.+...+...+....+..+.|+
T Consensus       473 ~~~~~~~~~~~lgk~pv~v~d-~pGfi~NRl~~~~~~ea~~l~~eG  517 (714)
T TIGR02437       473 TIATVVAYASKMGKTPIVVND-CPGFFVNRVLFPYFGGFSKLLRDG  517 (714)
T ss_pred             HHHHHHHHHHHcCCEEEEeCC-cccchHHHHHHHHHHHHHHHHHCC
Confidence            999999999999999999974 567888777766666655555554

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=99.44  E-value=4.5e-12  Score=96.33  Aligned_cols=134  Identities=16%  Similarity=0.198  Sum_probs=94.3

Q ss_pred             CcHHHHHHHHhCCCc---EEEEcCCchhHHHHHHc--CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGHD---VIVYDKNTDASQTLAKE--GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~~---V~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||.+|++.|.+.|++   +.+|+|++++.+.+.+.  +...++++.++++++|+||+++|+ +.+..++   +++.  +.
T Consensus        11 mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p-~~~~~vl---~~l~--~~   84 (258)
T PRK06476         11 ITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRP-QIAEEVL---RALR--FR   84 (258)
T ss_pred             HHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCH-HHHHHHH---HHhc--cC
Confidence            789999999998864   57899999998887765  456677888888999999999984 7778877   5552  56


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEE
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVH  149 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~  149 (183)
                      ++++|+++...  .....+.+.+......+..+|...  .....+. +.++.++    +.++++|+.+|..++.
T Consensus        85 ~~~~vis~~ag--~~~~~l~~~~~~~~~~~r~~P~~~--~a~~~g~-t~~~~~~----~~~~~l~~~lG~~~~~  149 (258)
T PRK06476         85 PGQTVISVIAA--TDRAALLEWIGHDVKLVRAIPLPF--VAERKGV-TAIYPPD----PFVAALFDALGTAVEC  149 (258)
T ss_pred             CCCEEEEECCC--CCHHHHHHHhCCCCCEEEECCCCh--hhhCCCC-eEecCCH----HHHHHHHHhcCCcEEE
Confidence            78999986643  444455555543333444566632  2223343 4444442    5889999999987664

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=99.41  E-value=1.3e-12  Score=111.87  Aligned_cols=165  Identities=16%  Similarity=0.188  Sum_probs=118.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------c-------------CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------E-------------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||..||..++.+|++|++||++++.+++..+           .             .+..+++.. .+++||+||.++|.
T Consensus       346 MG~gIA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~aDlViEAv~E  424 (737)
T TIGR02441       346 MGAGIAQVSVDKGLKTVLKDATPAGLDRGQQQVFKGLNKKVKRKKITSLERDSILSNLTPTLDYS-GFKNADMVIEAVFE  424 (737)
T ss_pred             hHHHHHHHHHhCCCcEEEecCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH-HhccCCeehhhccc
Confidence            8999999999999999999999988665322           1             234445554 56899999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEe---cCCHH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMV---GGDKS  131 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~  131 (183)
                      ...+|.-+|  .++.+..+++.++...||+.+.+..+-.-..+++  |.||.+.+-...        ++-++   ..+++
T Consensus       425 ~l~~K~~vf--~~l~~~~~~~~ilasNTSsl~i~~la~~~~~p~r~ig~Hff~P~~~m~--------LvEvv~g~~Ts~~  494 (737)
T TIGR02441       425 DLSLKHKVI--KEVEAVVPPHCIIASNTSALPIKDIAAVSSRPEKVIGMHYFSPVDKMQ--------LLEIITHDGTSKD  494 (737)
T ss_pred             cHHHHHHHH--HHHHhhCCCCcEEEEcCCCCCHHHHHhhcCCccceEEEeccCCcccCc--------eEEEeCCCCCCHH
Confidence            999998776  7888899999998766666666543322111222  667766332211        22222   35889


Q ss_pred             HHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          132 SLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      +++.+..+++.+|+.++.+.+ ..|.++..+...+....+..+.|+
T Consensus       495 ~~~~~~~~~~~lgk~pv~v~d-~pGFi~NRi~~~~~~ea~~lv~eG  539 (737)
T TIGR02441       495 TLASAVAVGLKQGKVVIVVKD-GPGFYTTRCLGPMLAEVIRLLQEG  539 (737)
T ss_pred             HHHHHHHHHHHCCCeEEEECC-cCCchHHHHHHHHHHHHHHHHHcC
Confidence            999999999999999999865 557787777766666665555554

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=99.41  E-value=2.7e-12  Score=109.60  Aligned_cols=165  Identities=13%  Similarity=0.096  Sum_probs=116.0

Q ss_pred             CcHHHHHHHH-hCCCcEEEEcCCchhHHHHHH-----------c-------------CCcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLL-KNGHDVIVYDKNTDASQTLAK-----------E-------------GANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~-~~g~~V~~~~~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      ||..||..++ +.|++|++||++++.+++..+           .             .+...+++ +.+++||+||.++|
T Consensus       315 mG~~iA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~adlViEav~  393 (699)
T TIGR02440       315 MGGGIASVTATKAGIPVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITGTTDY-RGFKDVDIVIEAVF  393 (699)
T ss_pred             HHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEEeCCh-HHhccCCEEEEecc
Confidence            8999999998 589999999999986554321           1             23345555 45789999999999


Q ss_pred             ChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEe---cCCH
Q psy755           56 ASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMV---GGDK  130 (183)
Q Consensus        56 ~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~---~g~~  130 (183)
                      ....+|.-+|  .++.+..++++++...|++.+.+..+-.-..+++  |.||++.|-...        ++-++   ..++
T Consensus       394 E~l~~K~~v~--~~l~~~~~~~~ilasnTS~l~i~~la~~~~~p~r~~g~HffnP~~~~~--------lVEvv~g~~T~~  463 (699)
T TIGR02440       394 EDLALKHQMV--KDIEQECAAHTIFASNTSSLPIGQIAAAASRPENVIGLHYFSPVEKMP--------LVEVIPHAGTSE  463 (699)
T ss_pred             ccHHHHHHHH--HHHHhhCCCCcEEEeCCCCCCHHHHHHhcCCcccEEEEecCCccccCc--------eEEEeCCCCCCH
Confidence            9999988776  7888888899888776666666543222111122  566666332211        22222   3588


Q ss_pred             HHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          131 SSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       131 ~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      +.++.+.++++.+|+.++.+.+ ..|.....+...+....+..+.|+
T Consensus       464 ~~~~~~~~~~~~~gk~pv~v~d-~pGfi~nRl~~~~~~Ea~~l~~~G  509 (699)
T TIGR02440       464 QTIATTVALAKKQGKTPIVVAD-KAGFYVNRILAPYMNEAARLLLEG  509 (699)
T ss_pred             HHHHHHHHHHHHcCCeEEEEcc-ccchHHHHHHHHHHHHHHHHHHCC
Confidence            9999999999999999999965 567887777666666555555543

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=99.39  E-value=4.4e-12  Score=108.48  Aligned_cols=165  Identities=13%  Similarity=0.105  Sum_probs=118.3

Q ss_pred             CcHHHHHHHH-hCCCcEEEEcCCchhHHHHHH-----------c-------------CCcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLL-KNGHDVIVYDKNTDASQTLAK-----------E-------------GANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~-~~g~~V~~~~~~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      ||..||..++ ..|++|++||++++.+++..+           .             .+..+++. +.+++||+||.++|
T Consensus       320 mG~giA~~~a~~~G~~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~aDlViEav~  398 (708)
T PRK11154        320 MGGGIAYVTATKAGLPVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISGTTDY-RGFKHADVVIEAVF  398 (708)
T ss_pred             hhHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEEeCCh-HHhccCCEEeeccc
Confidence            8999999999 889999999999987655321           1             23444555 45789999999999


Q ss_pred             ChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEe---cCCH
Q psy755           56 ASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMV---GGDK  130 (183)
Q Consensus        56 ~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~---~g~~  130 (183)
                      ....+|.-+|  .++.+..++++++...|++.+.+..+-.-..+++  |.||.+.|-..        +++-++   ..++
T Consensus       399 E~~~~K~~v~--~~le~~~~~~~ilasnTS~l~i~~la~~~~~p~r~ig~Hff~P~~~~--------~lVEvv~g~~Ts~  468 (708)
T PRK11154        399 EDLALKQQMV--AEVEQNCAPHTIFASNTSSLPIGQIAAAAARPEQVIGLHYFSPVEKM--------PLVEVIPHAKTSA  468 (708)
T ss_pred             ccHHHHHHHH--HHHHhhCCCCcEEEECCCCCCHHHHHHhcCcccceEEEecCCccccC--------ceEEEECCCCCCH
Confidence            9999988776  7888899999999877777666643332222222  56666633221        122222   3588


Q ss_pred             HHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          131 SSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       131 ~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      +.++.+..+++.+|+.++.+.+ ..|.....+...+....+..+.|+
T Consensus       469 ~~~~~~~~~~~~~gk~pv~v~d-~pGfi~nRl~~~~~~EA~~lv~eG  514 (708)
T PRK11154        469 ETIATTVALAKKQGKTPIVVRD-GAGFYVNRILAPYINEAARLLLEG  514 (708)
T ss_pred             HHHHHHHHHHHHcCCceEEEec-cCcHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999998864 667788777777666666665554

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=99.38  E-value=1.8e-11  Score=96.11  Aligned_cols=162  Identities=14%  Similarity=0.180  Sum_probs=104.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC--C------------cccCCHHHHh-ccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG--A------------NMALSLSTLA-SGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--~------------~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||..+|..|.++|++|.+|+|+++.++.+.+.+  .            ....++.+.+ ..+|+||++||+ ..++.++ 
T Consensus        11 ~G~ala~~L~~~g~~V~l~~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Dliiiavks-~~~~~~l-   88 (326)
T PRK14620         11 FGTAIAIALSSKKISVNLWGRNHTTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSDNATCIILAVPT-QQLRTIC-   88 (326)
T ss_pred             HHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhCCCCEEEEEeCH-HHHHHHH-
Confidence            799999999999999999999998887776531  1            1234555665 589999999987 6688887 


Q ss_pred             CCccccc-cCCCCcEEEeccCCCchh-----HHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHH
Q psy755           66 GSDGILK-HAKPGVIVIDSSTVDPQV-----PQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPI  139 (183)
Q Consensus        66 ~~~~l~~-~l~~~~iiid~s~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l  139 (183)
                        +.+.+ .+.+++.|+..++.....     .+.+.+.++...+..+..|-............+.+.+.+.+..+.+.++
T Consensus        89 --~~l~~~~l~~~~~vv~~~nGi~~~~~~~~~~~l~~~~~~~~~~~~~Gp~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~  166 (326)
T PRK14620         89 --QQLQDCHLKKNTPILICSKGIEKSSLKFPSEIVNEILPNNPIAILSGPSFAKEIAEKLPCSIVLAGQNETLGSSLISK  166 (326)
T ss_pred             --HHHHHhcCCCCCEEEEEEcCeeCCCCccHHHHHHHHcCCCceEeecCCcHHHHHHcCCCcEEEEecCCHHHHHHHHHH
Confidence              88887 887777666666554221     2222332222111122222211111111122233444555555677777


Q ss_pred             HHHhcCCeEEeCCcchHHHHHHHHHHH
Q psy755          140 LKCMGRNIVHCGDSGNGQVAKLCNNML  166 (183)
Q Consensus       140 ~~~~g~~~~~~g~~g~a~~~k~~~~~~  166 (183)
                      |+.-+.+++...+.-..++.|.+.|.+
T Consensus       167 l~~~~~~~~~~~Di~g~~~~k~~~N~i  193 (326)
T PRK14620        167 LSNENLKIIYSQDIIGVQIGAALKNII  193 (326)
T ss_pred             HCCCCeEEEecCcchhhhhHHHHHHHH
Confidence            777777777778888899999999986

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=99.35  E-value=7.1e-11  Score=89.20  Aligned_cols=138  Identities=15%  Similarity=0.228  Sum_probs=103.9

Q ss_pred             CcHHHHHHHHhCC----CcEEEEcCCchhHHHHH-HcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNG----HDVIVYDKNTDASQTLA-KEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g----~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||.+|+..|.+.|    .+|++.+|++++.+.+. ..|+..+++..+++..+|+||++|++ +.++.++   ..+.+ ..
T Consensus        12 Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~~~~~~~~~~~~advv~LavKP-q~~~~vl---~~l~~-~~   86 (266)
T COG0345          12 MGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVVTTTDNQEAVEEADVVFLAVKP-QDLEEVL---SKLKP-LT   86 (266)
T ss_pred             HHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCcccCcHHHHHhhCCEEEEEeCh-HhHHHHH---HHhhc-cc
Confidence            8999999999999    58999999999987444 44766677788999999999999965 7888888   78888 78


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEec--CCHHHHHHHHHHHHHhcCCeE
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVG--GDKSSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~g~~~~  148 (183)
                      ++++||......+.  ..+.+++.  +.+++ ..|...+.....|...+..+  .+++..+.+.++|+.+|..++
T Consensus        87 ~~~lvISiaAGv~~--~~l~~~l~--~~~vv-R~MPNt~a~vg~g~t~i~~~~~~~~~~~~~v~~l~~~~G~v~~  156 (266)
T COG0345          87 KDKLVISIAAGVSI--ETLERLLG--GLRVV-RVMPNTPALVGAGVTAISANANVSEEDKAFVEALLSAVGKVVE  156 (266)
T ss_pred             CCCEEEEEeCCCCH--HHHHHHcC--CCceE-EeCCChHHHHcCcceeeecCccCCHHHHHHHHHHHHhcCCeEE
Confidence            99999976655444  34555554  33333 34556667777776444443  367888899999999998543

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=99.35  E-value=3.5e-12  Score=89.93  Aligned_cols=127  Identities=18%  Similarity=0.313  Sum_probs=86.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC--------------CcccCCHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG--------------ANMALSLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||.++|..|+++|++|.+|+|+++.++.+.+.+              +..+++++++++++|+|++++|. +..+.++  
T Consensus        10 ~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs-~~~~~~~--   86 (157)
T PF01210_consen   10 WGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS-QAHREVL--   86 (157)
T ss_dssp             HHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G-GGHHHHH--
T ss_pred             HHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH-HHHHHHH--
Confidence            689999999999999999999999888887642              33567899999999999999988 5678887  


Q ss_pred             CccccccCCCCcEEEeccCCC-chh----HHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHH
Q psy755           67 SDGILKHAKPGVIVIDSSTVD-PQV----PQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKS  131 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~~~-~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  131 (183)
                       +.+.++++++++++.++.+. +.+    .+.+.+.+....+.++.+|.+...........+.+.+.+.+
T Consensus        87 -~~l~~~l~~~~~ii~~~KG~~~~~~~~~~~~i~~~~~~~~~~~lsGP~~A~Ei~~~~pt~~~~as~~~~  155 (157)
T PF01210_consen   87 -EQLAPYLKKGQIIISATKGFEPGTLLLLSEVIEEILPIPRIAVLSGPSFAEEIAEGKPTAVVIASKNEE  155 (157)
T ss_dssp             -HHHTTTSHTT-EEEETS-SEETTEEEEHHHHHHHHHSSCGEEEEESS--HHHHHTT--EEEEEEESSHH
T ss_pred             -HHHhhccCCCCEEEEecCCcccCCCccHHHHHHHHhhhcceEEeeCccHHHHHHcCCCeEEEEEecccc
Confidence             99999999999999888664 222    33344444333345555665554444444554445555544

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=99.33  E-value=5.4e-12  Score=85.31  Aligned_cols=99  Identities=23%  Similarity=0.397  Sum_probs=66.7

Q ss_pred             CcHHHHHHHHhCCCcEEE-EcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc--CCC
Q psy755            1 MGSHMARNLLKNGHDVIV-YDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH--AKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~-~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~--l~~   76 (183)
                      .|..|++.|.++||+|.. |+|++++.+++.+. +.....++.+.++++|++|++||+. .+..+.   +++...  +.+
T Consensus        21 VG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va---~~La~~~~~~~   96 (127)
T PF10727_consen   21 VGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVA---EQLAQYGAWRP   96 (127)
T ss_dssp             CCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHH---HHHHCC--S-T
T ss_pred             HHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHH---HHHHHhccCCC
Confidence            478999999999999876 58999888887765 4444557788899999999999995 688887   888876  889


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCcEE
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQITFL  106 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~~~  106 (183)
                      |++|+++|...+.....-   +.++|....
T Consensus        97 g~iVvHtSGa~~~~vL~p---~~~~Ga~~~  123 (127)
T PF10727_consen   97 GQIVVHTSGALGSDVLAP---ARERGAIVA  123 (127)
T ss_dssp             T-EEEES-SS--GGGGHH---HHHTT-EEE
T ss_pred             CcEEEECCCCChHHhhhh---HHHCCCeEE
Confidence            999999999888876443   445555433

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=99.31  E-value=9.2e-11  Score=88.42  Aligned_cols=139  Identities=13%  Similarity=0.169  Sum_probs=96.3

Q ss_pred             CcHHHHHHHHhCCC---c-EEEEcC-CchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKNGH---D-VIVYDK-NTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g~---~-V~~~~~-~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||.+++..|.++|+   + +++++| ++++.+.+.+. ++....++.++++++|+||+++|+ +..+.++   +++.+.+
T Consensus        15 mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~-~~~~~v~---~~l~~~~   90 (245)
T PRK07634         15 MAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPP-SAHEELL---AELSPLL   90 (245)
T ss_pred             HHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCH-HHHHHHH---HHHHhhc
Confidence            78999999998873   3 777887 46777777654 666667888889999999999987 5567777   7777776


Q ss_pred             CCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEe--cCCHHHHHHHHHHHHHhcCCeEE
Q psy755           75 KPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMV--GGDKSSLEKAKPILKCMGRNIVH  149 (183)
Q Consensus        75 ~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~l~~~~g~~~~~  149 (183)
                      + +++|++++.+....  .+.+.+.. +..++- +|  ..+.....+...+..  ..+++..+.++++|+.+|..++.
T Consensus        91 ~-~~~vis~~~gi~~~--~l~~~~~~-~~~v~r~~P--n~a~~v~~g~~~~~~~~~~~~~~~~~v~~lf~~~G~~~~~  162 (245)
T PRK07634         91 S-NQLVVTVAAGIGPS--YLEERLPK-GTPVAWIMP--NTAAEIGKSISLYTMGQSVNETHKETLQLILKGIGTSQLC  162 (245)
T ss_pred             c-CCEEEEECCCCCHH--HHHHHcCC-CCeEEEECC--cHHHHHhcCCeEEeeCCCCCHHHHHHHHHHHHhCCCEEEE
Confidence            5 67888888765554  34444432 222222 34  333444455333332  35778889999999999997753

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=99.29  E-value=1.1e-10  Score=89.54  Aligned_cols=138  Identities=13%  Similarity=0.160  Sum_probs=98.5

Q ss_pred             CcHHHHHHHHhCC----CcEEEEcCCc-hhHHHHHHc--CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLLKNG----HDVIVYDKNT-DASQTLAKE--GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~~g----~~V~~~~~~~-~~~~~~~~~--g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||.++++.|.+.|    ++|++|+|++ ++.+.+...  +.....++.++++++|+||+|+|+ +.++.++   +++.+.
T Consensus        12 mG~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp-~~~~~vl---~~l~~~   87 (277)
T PRK06928         12 MADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPP-LAVLPLL---KDCAPV   87 (277)
T ss_pred             HHHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCH-HHHHHHH---HHHHhh
Confidence            7999999999998    7899999865 344544443  234456788888999999999985 6688887   788888


Q ss_pred             CCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEec--CCHHHHHHHHHHHHHhcCCe
Q psy755           74 AKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVG--GDKSSLEKAKPILKCMGRNI  147 (183)
Q Consensus        74 l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~g~~~  147 (183)
                      ++++++|++..+..+..  .+.+.++.  .+ +-..|...+.....|...+..+  -+++..+.++.+|+.+|..+
T Consensus        88 l~~~~~ivS~~aGi~~~--~l~~~~~~--~~-vvR~MPN~~~~~g~g~t~~~~~~~~~~~~~~~v~~l~~~~G~~~  158 (277)
T PRK06928         88 LTPDRHVVSIAAGVSLD--DLLEITPG--LQ-VSRLIPSLTSAVGVGTSLVAHAETVNEANKSRLEETLSHFSHVM  158 (277)
T ss_pred             cCCCCEEEEECCCCCHH--HHHHHcCC--CC-EEEEeCccHHHHhhhcEEEecCCCCCHHHHHHHHHHHHhCCCEE
Confidence            88888888877665444  45555432  12 3334556667777776444433  25577789999999999743

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=99.29  E-value=5.7e-11  Score=85.82  Aligned_cols=136  Identities=21%  Similarity=0.290  Sum_probs=85.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--------------------CCcccCCHHHHhccCCEEEEecCChH--
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--------------------GANMALSLSTLASGAEFIISMLPASQ--   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--------------------g~~~~~~~~~~~~~adiVi~~vp~~~--   58 (183)
                      +|..+|..|+++||+|++||.++++++.+.+.                    +...+++..+++.++|++|+|||.|.  
T Consensus        11 vGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv~~I~VpTP~~~   90 (185)
T PF03721_consen   11 VGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADVVFICVPTPSDE   90 (185)
T ss_dssp             THHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SEEEE----EBET
T ss_pred             chHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccceEEEecCCCccc
Confidence            58899999999999999999999988776542                    23456677888899999999998663  


Q ss_pred             -------HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHH-HHHHhcC-----CcEEeecccC--CH--HHHhcCc
Q psy755           59 -------DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLS-NLAREKQ-----ITFLDAPVSG--GT--KAAQEAT  121 (183)
Q Consensus        59 -------~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~-~~~~~~g-----~~~~~~~~~~--~~--~~~~~~~  121 (183)
                             .+..++   +.+.+.++++++|+.-|+..|.+.+.+. ..+++.+     +++..+|-+-  |.  ......+
T Consensus        91 ~~~~Dls~v~~a~---~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~~~~f~la~~PErl~~G~a~~d~~~~~  167 (185)
T PF03721_consen   91 DGSPDLSYVESAI---ESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGKKEDFHLAYSPERLREGRAIEDFRNPP  167 (185)
T ss_dssp             TTSBETHHHHHHH---HHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCTTTCEEEEE------TTSHHHHHHSSS
T ss_pred             cCCccHHHHHHHH---HHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhcccccCCeEEECCCccCCCCcchhccCCC
Confidence                   345555   7888999999999999999999998555 4444433     3455566332  21  1122233


Q ss_pred             eEEEecCCHHHHHHHHHH
Q psy755          122 LTFMVGGDKSSLEKAKPI  139 (183)
Q Consensus       122 ~~~~~~g~~~~~~~~~~l  139 (183)
                      .++.-..++...+.+++|
T Consensus       168 rvV~G~~~~~~~~~~~~l  185 (185)
T PF03721_consen  168 RVVGGCDDESAEERLKEL  185 (185)
T ss_dssp             EEEEEESSHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHhcC
Confidence            233333455554465553

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=99.28  E-value=5.5e-12  Score=81.57  Aligned_cols=80  Identities=31%  Similarity=0.493  Sum_probs=66.8

Q ss_pred             CcHHHHHHHHhCC---CcEEEE-cCCchhHHHHHHc-CCcccC-CHHHHhccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKNG---HDVIVY-DKNTDASQTLAKE-GANMAL-SLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g---~~V~~~-~~~~~~~~~~~~~-g~~~~~-~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||.+|++.|.+.|   ++|.++ +|++++.+++.+. +..... +..++++++|+||+|+|+ +.+..++   +++ +..
T Consensus        10 mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p-~~~~~v~---~~i-~~~   84 (96)
T PF03807_consen   10 MGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKP-QQLPEVL---SEI-PHL   84 (96)
T ss_dssp             HHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-G-GGHHHHH---HHH-HHH
T ss_pred             HHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECH-HHHHHHH---HHH-hhc
Confidence            7999999999999   899955 9999999988765 555555 899999999999999976 6788887   777 778


Q ss_pred             CCCcEEEeccC
Q psy755           75 KPGVIVIDSST   85 (183)
Q Consensus        75 ~~~~iiid~s~   85 (183)
                      .+++++||+++
T Consensus        85 ~~~~~vis~~a   95 (96)
T PF03807_consen   85 LKGKLVISIAA   95 (96)
T ss_dssp             HTTSEEEEEST
T ss_pred             cCCCEEEEeCC
Confidence            89999999875

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>TIGR00112 proC pyrroline-5-carboxylate reductase

Probab=99.26  E-value=4.3e-10  Score=84.88  Aligned_cols=127  Identities=13%  Similarity=0.156  Sum_probs=93.3

Q ss_pred             CCcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhH
Q psy755           13 GHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVP   91 (183)
Q Consensus        13 g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~   91 (183)
                      .++|++|+|++++.+.+.+. |+...+++.++++++|+||+||+ |+.++.++   +++.+.+.++++|+++.+..+...
T Consensus         9 ~~~I~v~~R~~e~~~~l~~~~g~~~~~~~~e~~~~aDiIiLaVk-P~~i~~vl---~~l~~~~~~~~~ivS~~agi~~~~   84 (245)
T TIGR00112         9 AYDIIVINRSPEKLAALAKELGIVASSDAQEAVKEADVVFLAVK-PQDLEEVL---SELKSEKGKDKLLISIAAGVTLEK   84 (245)
T ss_pred             CCeEEEEcCCHHHHHHHHHHcCcEEeCChHHHHhhCCEEEEEeC-HHHHHHHH---HHHhhhccCCCEEEEecCCCCHHH
Confidence            35899999999998887664 77777888999999999999998 68899987   788877778899998887766653


Q ss_pred             HHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEec--CCHHHHHHHHHHHHHhcCCe
Q psy755           92 QTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVG--GDKSSLEKAKPILKCMGRNI  147 (183)
Q Consensus        92 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~g~~~  147 (183)
                        +.+.+.. +.+ +-..|...+.....|...+..+  .+++..+.++++|+.+|..+
T Consensus        85 --l~~~~~~-~~~-ivR~mPn~~~~~~~g~t~~~~~~~~~~~~~~~v~~lf~~~G~~~  138 (245)
T TIGR00112        85 --LSQLLGG-TRR-VVRVMPNTPAKVGAGVTAIAANANVSEEDRALVLALFKAVGEVV  138 (245)
T ss_pred             --HHHHcCC-CCe-EEEECCChHHHHhCCeEEEecCCCCCHHHHHHHHHHHHhCCCEE
Confidence              4444432 112 3334555666666665444433  25567789999999999754

This enzyme catalyzes the final step in proline biosynthesis. Among the four paralogs in Bacillus subtilis (proG, proH, proI, and comER), ComER is the most divergent and does not prevent proline auxotrophy from mutation of the other three. It is excluded from the seed and scores between the trusted and noise cutoffs.

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=99.18  E-value=1.6e-09  Score=84.52  Aligned_cols=139  Identities=19%  Similarity=0.244  Sum_probs=93.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh-HHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA-SQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||.++|++|.+.|++|++++++..+ .+.+.+.|.... ++.++++.||+|++++|+... ..++.  +++.+.+++|++
T Consensus        28 mG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~-s~~eaa~~ADVVvLaVPd~~~-~~V~~--~~I~~~Lk~g~i  103 (330)
T PRK05479         28 QGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVL-TVAEAAKWADVIMILLPDEVQ-AEVYE--EEIEPNLKEGAA  103 (330)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeC-CHHHHHhcCCEEEEcCCHHHH-HHHHH--HHHHhcCCCCCE
Confidence            7999999999999999998877553 344455576554 889999999999999998654 67753  568889999998


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHH-H----HhcCceEEE-ecCC--HHHHHHHHHHHHHhcCCe
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTK-A----AQEATLTFM-VGGD--KSSLEKAKPILKCMGRNI  147 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~-~----~~~~~~~~~-~~g~--~~~~~~~~~l~~~~g~~~  147 (183)
                      |+.+........   . .....+..++- +|-..+.. +    ...|-..++ +..+  .++.+.+..++.++|...
T Consensus       104 L~~a~G~~i~~~---~-~~p~~~~~Vi~vaPn~Pg~~vr~~~~~G~Gv~~l~av~~d~t~~a~~~a~~l~~aiG~~~  176 (330)
T PRK05479        104 LAFAHGFNIHFG---Q-IVPPADVDVIMVAPKGPGHLVRREYEEGGGVPCLIAVHQDASGNAKDLALAYAKGIGGTR  176 (330)
T ss_pred             EEECCCCChhhc---e-eccCCCCcEEEeCCCCCchhhhhhhhcCCCceEEEEecCCCCHHHHHHHHHHHHHcCCCc
Confidence            865555332221   1 11223333333 34333320 0    233443444 4444  788899999999999764

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=99.18  E-value=6.2e-10  Score=86.49  Aligned_cols=159  Identities=15%  Similarity=0.198  Sum_probs=105.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-------------ccCCHHHHhccCCEEEEecCChHHHHHHhcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-------------MALSLSTLASGAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      ||..+|..|+++|++|++|+| +++.+.+.+.|..             ..++..+..+.+|+||+|+|.. +++.++   
T Consensus        11 iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~-~~~~~~---   85 (305)
T PRK12921         11 VGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAY-QLDAAI---   85 (305)
T ss_pred             HHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEeccc-CHHHHH---
Confidence            689999999999999999999 7777777665421             1234555568899999999874 467776   


Q ss_pred             ccccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccC-CHH-HHhcCceEEEec----CCHHHHHHHH
Q psy755           68 DGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSG-GTK-AAQEATLTFMVG----GDKSSLEKAK  137 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~-~~~-~~~~~~~~~~~~----g~~~~~~~~~  137 (183)
                      +.+.+.+.++++|+...+... ....+.+.+++.    ++.++.++..+ +.. ....+.  +..+    ...+..+.+.
T Consensus        86 ~~l~~~~~~~~~ii~~~nG~~-~~~~l~~~~~~~~v~~g~~~~~~~~~~~g~v~~~~~~~--~~iG~~~~~~~~~~~~l~  162 (305)
T PRK12921         86 PDLKPLVGEDTVIIPLQNGIG-QLEQLEPYFGRERVLGGVVFISAQLNGDGVVVQRADHR--LTFGEIPGQRSERTRAVR  162 (305)
T ss_pred             HHHHhhcCCCCEEEEeeCCCC-hHHHHHHhCCcccEEEEEEEEEEEECCCeEEEEcCCCc--EEEcCCCCCcCHHHHHHH
Confidence            788888888888887776543 223444444332    23334433332 111 111122  2232    2234556778


Q ss_pred             HHHHHhcCCeEEeCCcchHHHHHHHHHHHH
Q psy755          138 PILKCMGRNIVHCGDSGNGQVAKLCNNMLL  167 (183)
Q Consensus       138 ~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~  167 (183)
                      ++|...|..+....+.-...+.|++.|...
T Consensus       163 ~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~  192 (305)
T PRK12921        163 DALAGARLEVVLSENIRQDIWRKLLFNAVM  192 (305)
T ss_pred             HHHHhCCCCceecHHHHHHHHHHHHHHHhH
Confidence            888888887777778888999999988654

>PTZ00431 pyrroline carboxylate reductase; Provisional

Probab=99.17  E-value=1.5e-09  Score=82.61  Aligned_cols=133  Identities=11%  Similarity=0.081  Sum_probs=90.5

Q ss_pred             CcHHHHHHHHhCCC----cEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGH----DVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~----~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||.+|++.|.+++.    ++++++|++++.      +.....++.+.++++|+||+|+|+ +.++.++   +++.+.+.+
T Consensus        14 mG~ai~~~l~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~D~Vilavkp-~~~~~vl---~~i~~~l~~   83 (260)
T PTZ00431         14 MGSALAYGIENSNIIGKENIYYHTPSKKNT------PFVYLQSNEELAKTCDIIVLAVKP-DLAGKVL---LEIKPYLGS   83 (260)
T ss_pred             HHHHHHHHHHhCCCCCcceEEEECCChhcC------CeEEeCChHHHHHhCCEEEEEeCH-HHHHHHH---HHHHhhccC
Confidence            89999999998873    499999987652      334556788888899999999976 7788888   788888766


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEec--CCHHHHHHHHHHHHHhcCCeE
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVG--GDKSSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~g~~~~  148 (183)
                      +.+|.++++......+.   .+... .. +-..+.+.+.....+...+...  .+++..+.++++|+.+|...+
T Consensus        84 ~~iIS~~aGi~~~~l~~---~~~~~-~~-vvr~mPn~p~~~g~g~t~i~~~~~~~~~~~~~v~~l~~~~G~~~~  152 (260)
T PTZ00431         84 KLLISICGGLNLKTLEE---MVGVE-AK-IVRVMPNTPSLVGQGSLVFCANNNVDSTDKKKVIDIFSACGIIQE  152 (260)
T ss_pred             CEEEEEeCCccHHHHHH---HcCCC-Ce-EEEECCCchhHhcceeEEEEeCCCCCHHHHHHHHHHHHhCCcEEE
Confidence            55666666666544433   22211 11 2234445555555564333322  255678899999999998543

>KOG2304|consensus

Probab=99.13  E-value=3.9e-11  Score=87.18  Aligned_cols=144  Identities=21%  Similarity=0.256  Sum_probs=103.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-----------------------------CCcccCCHHHHhccCCEEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-----------------------------GANMALSLSTLASGAEFII   51 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-----------------------------g~~~~~~~~~~~~~adiVi   51 (183)
                      ||..||+--+..|++|+++|++++.+.++.+.                             .+..+++..+++.++|+||
T Consensus        22 MGSGIAQv~a~sg~~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~~~tnv~~~v~dadlii  101 (298)
T KOG2304|consen   22 MGSGIAQVAATSGLNVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIKTSTNVSDAVSDADLII  101 (298)
T ss_pred             cchhHHHHHHhcCCceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHHHcCCHHHhhhhhHHHH
Confidence            89999999999999999999999887665430                             1455667788889999999


Q ss_pred             EecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHH--HHHHhcCCcEEe-ecccCCHHHHhcCceEEEecC
Q psy755           52 SMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLS--NLAREKQITFLD-APVSGGTKAAQEATLTFMVGG  128 (183)
Q Consensus        52 ~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~--~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g  128 (183)
                      .++-.+..++.-+|  .++...-++.+++...+++...+.....  +.-+-.|.||++ .|++.-.+-.+      ....
T Consensus       102 EAivEn~diK~~lF--~~l~~~ak~~~il~tNTSSl~lt~ia~~~~~~srf~GlHFfNPvPvMKLvEVir------~~~T  173 (298)
T KOG2304|consen  102 EAIVENLDIKRKLF--KDLDKIAKSSTILATNTSSLSLTDIASATQRPSRFAGLHFFNPVPVMKLVEVIR------TDDT  173 (298)
T ss_pred             HHHHHhHHHHHHHH--HHHHhhcccceEEeecccceeHHHHHhhccChhhhceeeccCCchhHHHhhhhc------CCCC
Confidence            99999888888776  6666666666776644444333322222  111123899998 57777554221      1235


Q ss_pred             CHHHHHHHHHHHHHhcCCeEEeCC
Q psy755          129 DKSSLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus       129 ~~~~~~~~~~l~~~~g~~~~~~g~  152 (183)
                      +++.+..+..+-+.+|+.++.+-+
T Consensus       174 S~eTf~~l~~f~k~~gKttVackD  197 (298)
T KOG2304|consen  174 SDETFNALVDFGKAVGKTTVACKD  197 (298)
T ss_pred             CHHHHHHHHHHHHHhCCCceeecC
Confidence            889999999999999999988766

>PLN03139 formate dehydrogenase; Provisional

Probab=99.12  E-value=1.9e-09  Score=85.86  Aligned_cols=101  Identities=12%  Similarity=0.239  Sum_probs=86.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|.+||++....+.....|+...+++++++.+||+|++++|...+++.++.  +++...+++|.++
T Consensus       210 IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li~--~~~l~~mk~ga~l  287 (386)
T PLN03139        210 IGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFN--KERIAKMKKGVLI  287 (386)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHhC--HHHHhhCCCCeEE
Confidence            68999999999999999999986544444455666667999999999999999999999999873  6788899999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      ||++.....+..++.+.++...+
T Consensus       288 IN~aRG~iVDe~AL~~AL~sG~l  310 (386)
T PLN03139        288 VNNARGAIMDTQAVADACSSGHI  310 (386)
T ss_pred             EECCCCchhhHHHHHHHHHcCCc
Confidence            99999999999999998886543

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=99.11  E-value=1.3e-09  Score=84.62  Aligned_cols=161  Identities=17%  Similarity=0.205  Sum_probs=104.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-----------cCCHHHHhccCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-----------ALSLSTLASGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----------~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      ||+.+|..|.+.|++|++++|++++.+.+.+.|...           .++..+. ..+|+||+++|.. +++.++   +.
T Consensus        11 ~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~-~~~~~~---~~   85 (304)
T PRK06522         11 IGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAY-QLPAAL---PS   85 (304)
T ss_pred             HHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEecccc-cHHHHH---HH
Confidence            689999999999999999999988888877766422           3445554 8899999999874 567777   88


Q ss_pred             ccccCCCCcEEEeccCCCchhHHHHHHHHHhcC----CcEEeecccC--CHHHHhcCceEEEec-CCHHHHHHHHHHHHH
Q psy755           70 ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQ----ITFLDAPVSG--GTKAAQEATLTFMVG-GDKSSLEKAKPILKC  142 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g----~~~~~~~~~~--~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~  142 (183)
                      +.+.+.++++|+.+.+.... ...+.+.+....    ..+..+...+  .......+...+... ++.+..+.+.++|..
T Consensus        86 l~~~l~~~~~iv~~~nG~~~-~~~l~~~~~~~~i~~~~~~~~~~~~~p~~v~~~~~g~~~ig~~~~~~~~~~~l~~~l~~  164 (304)
T PRK06522         86 LAPLLGPDTPVLFLQNGVGH-LEELAAYIGPERVLGGVVTHAAELEGPGVVRHTGGGRLKIGEPDGESAAAEALADLLNA  164 (304)
T ss_pred             HhhhcCCCCEEEEecCCCCc-HHHHHHhcCcccEEEEEEEEeeEecCCCEEEEcCCCCEEEeCCCCCcHHHHHHHHHHHh
Confidence            88888888888887776432 223444333221    1111111111  111112233222211 222335678888888


Q ss_pred             hcCCeEEeCCcchHHHHHHHHHHHH
Q psy755          143 MGRNIVHCGDSGNGQVAKLCNNMLL  167 (183)
Q Consensus       143 ~g~~~~~~g~~g~a~~~k~~~~~~~  167 (183)
                      .|.++....+.-...+.|++.|...
T Consensus       165 ~~~~~~~~~di~~~~w~Kl~~N~~~  189 (304)
T PRK06522        165 AGLDVEWSPDIRTEIWRKLWVNCVI  189 (304)
T ss_pred             cCCCCCCChHHHHHHHHHHHHHhch
Confidence            8887766677888999999888644

>PRK07574 formate dehydrogenase; Provisional

Probab=99.11  E-value=8.8e-10  Score=87.82  Aligned_cols=101  Identities=12%  Similarity=0.172  Sum_probs=86.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|++|...|++|.+|||+....+.....++....+++++++.||+|++++|...+++.++  .++..+.+++|.++
T Consensus       203 IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li--~~~~l~~mk~ga~l  280 (385)
T PRK07574        203 IGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLF--DADVLSRMKRGSYL  280 (385)
T ss_pred             HHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHh--CHHHHhcCCCCcEE
Confidence            6899999999999999999998754443444566666789999999999999999999999987  37788889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      ||++.....+..++.+.+....+
T Consensus       281 IN~aRG~iVDe~AL~~AL~sG~i  303 (385)
T PRK07574        281 VNTARGKIVDRDAVVRALESGHL  303 (385)
T ss_pred             EECCCCchhhHHHHHHHHHhCCc
Confidence            99999999999999998887543

>COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only]

Probab=99.10  E-value=7.9e-09  Score=76.60  Aligned_cols=172  Identities=20%  Similarity=0.317  Sum_probs=119.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch-----hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD-----ASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |..||..++++||+|++.+.|.+     ..++....|+...++..+.++.+++.++=+|-+..+-.+.   +++.+++++
T Consensus        33 Ga~mAiefAeAGHDVVLaePn~d~~dd~~w~~vedAGV~vv~dD~eaa~~~Ei~VLFTPFGk~T~~Ia---rei~~hvpE  109 (340)
T COG4007          33 GARMAIEFAEAGHDVVLAEPNRDIMDDEHWKRVEDAGVEVVSDDAEAAEHGEIHVLFTPFGKATFGIA---REILEHVPE  109 (340)
T ss_pred             chHHHHHHHHcCCcEEeecCCccccCHHHHHHHHhcCcEEecCchhhhhcceEEEEecccchhhHHHH---HHHHhhCcC
Confidence            67899999999999999976654     3566667799999888899999999999999997777776   899999999


Q ss_pred             CcEEEeccCCCchhHHH-HHHHHHhc----CCc-EEeecccCCHHHHhcCceEEEec--------CCHHHHHHHHHHHHH
Q psy755           77 GVIVIDSSTVDPQVPQT-LSNLAREK----QIT-FLDAPVSGGTKAAQEATLTFMVG--------GDKSSLEKAKPILKC  142 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~-~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~l~~~  142 (183)
                      |.+|.++++++|...-. +...++.+    |+. +..+.+.|+|..   +. .++.+        ..++..++..++.++
T Consensus       110 gAVicnTCT~sp~vLy~~LE~~Lr~kR~dVGvssmHPAgvPGtp~h---~~-yviagr~t~g~elATeEQi~r~velaes  185 (340)
T COG4007         110 GAVICNTCTVSPVVLYYSLEGELRTKREDVGVSSMHPAGVPGTPQH---GH-YVIAGRSTEGKELATEEQIERCVELAES  185 (340)
T ss_pred             CcEecccccCchhHHHHHhhhhhcCchhhcCccccCCCCCCCCCCC---ce-EEEeccCCCceeeccHHHHHHHHHHHHh
Confidence            99999999998876433 33333322    443 333456665542   22 23221        356788899999999


Q ss_pred             hcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy755          143 MGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG  181 (183)
Q Consensus       143 ~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~  181 (183)
                      .|+.++.+...- -..+.=+...+....++++.+-+.++
T Consensus       186 ~Gk~~yv~padv-~s~VaDmg~lvtav~l~gvldyy~Vg  223 (340)
T COG4007         186 TGKEVYVLPADV-VSAVADMGVLVTAVALSGVLDYYYVG  223 (340)
T ss_pred             cCCceEecCHHH-HHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence            999887765321 11222223344555555555554443

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=99.06  E-value=4.7e-10  Score=78.69  Aligned_cols=101  Identities=22%  Similarity=0.243  Sum_probs=76.6

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHHc-CC----cccCCHHHHhccCCEEEEecCChHH-HHHHhcCCcccccc
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKE-GA----NMALSLSTLASGAEFIISMLPASQD-VLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~-g~----~~~~~~~~~~~~adiVi~~vp~~~~-~~~v~~~~~~l~~~   73 (183)
                      ||.++++.|.+.| ++|++|||++++.+.+.+. +.    ....+..+.++++|+||+++|.+.. .+.+.+    ....
T Consensus        30 ~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvi~~~~~~~~~~~~~~~----~~~~  105 (155)
T cd01065          30 AARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAEADLIINTTPVGMKPGDELPL----PPSL  105 (155)
T ss_pred             HHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccccCCEEEeCcCCCCCCCCCCCC----CHHH
Confidence            6889999999986 7899999999988776554 32    2345677778999999999998764 233321    1234


Q ss_pred             CCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           74 AKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        74 l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++++++++|+++..+.+  .+.+.+++.|.++++
T Consensus       106 ~~~~~~v~D~~~~~~~~--~l~~~~~~~g~~~v~  137 (155)
T cd01065         106 LKPGGVVYDVVYNPLET--PLLKEARALGAKTID  137 (155)
T ss_pred             cCCCCEEEEcCcCCCCC--HHHHHHHHCCCceeC
Confidence            68999999999886555  778888888998888

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06444 prephenate dehydrogenase; Provisional

Probab=99.00  E-value=1.2e-08  Score=74.21  Aligned_cols=122  Identities=12%  Similarity=0.155  Sum_probs=87.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.++..|.+.||+|+                          +.+||+||+|+|... +..++   +++.      .+|
T Consensus        12 mG~~~~~~~~~~g~~v~--------------------------~~~~DlVilavPv~~-~~~~i---~~~~------~~v   55 (197)
T PRK06444         12 LGRVLCSILDDNGLGVY--------------------------IKKADHAFLSVPIDA-ALNYI---ESYD------NNF   55 (197)
T ss_pred             HHHHHHHHHHhCCCEEE--------------------------ECCCCEEEEeCCHHH-HHHHH---HHhC------CeE
Confidence            79999999999999986                          368999999999854 45554   4443      378


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcC--ceEEEec--CCHHHHHHHHHHHHHhcCCeEEeCCcch
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEA--TLTFMVG--GDKSSLEKAKPILKCMGRNIVHCGDSGN  155 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~--~~~~~~~--g~~~~~~~~~~l~~~~g~~~~~~g~~g~  155 (183)
                      +|.++++.....        ....|+. |||+| |..+..+  ..++++.  .+++..+.++++++  |.+++.+.+...
T Consensus        56 ~Dv~SvK~~i~~--------~~~~~vg~HPMfG-p~~a~~~lf~~~iv~~~~~~~~~~~~~~~l~~--G~~~~~~t~eeH  124 (197)
T PRK06444         56 VEISSVKWPFKK--------YSGKIVSIHPLFG-PMSYNDGVHRTVIFINDISRDNYLNEINEMFR--GYHFVEMTADEH  124 (197)
T ss_pred             EeccccCHHHHH--------hcCCEEecCCCCC-CCcCcccccceEEEECCCCCHHHHHHHHHHHc--CCEEEEeCHHHH
Confidence            999999885322        1446888 89998 3332221  2344442  35566778999998  889999999888


Q ss_pred             HHHHHHHHHHHHHH
Q psy755          156 GQVAKLCNNMLLGV  169 (183)
Q Consensus       156 a~~~k~~~~~~~~~  169 (183)
                      -..+..++.+-...
T Consensus       125 D~~~A~ishLpH~i  138 (197)
T PRK06444        125 DLLMSEIMVKPYII  138 (197)
T ss_pred             HHHHHHHHHHHHHH
Confidence            88888887765543

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=99.00  E-value=3.8e-09  Score=82.89  Aligned_cols=96  Identities=17%  Similarity=0.286  Sum_probs=81.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|...|++|++||++++.....    .....++.+++++||+|++++|...+.+.++.  +++.+.+++|.++
T Consensus       157 IG~~vA~~L~~~G~~V~~~d~~~~~~~~~----~~~~~~l~ell~~aDiVil~lP~t~~t~~li~--~~~l~~mk~gavl  230 (330)
T PRK12480        157 IGAATAKIYAGFGATITAYDAYPNKDLDF----LTYKDSVKEAIKDADIISLHVPANKESYHLFD--KAMFDHVKKGAIL  230 (330)
T ss_pred             HHHHHHHHHHhCCCEEEEEeCChhHhhhh----hhccCCHHHHHhcCCEEEEeCCCcHHHHHHHh--HHHHhcCCCCcEE
Confidence            68999999999999999999998653321    23456899999999999999999888878763  6778889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      |+++.+.-.+..++.+.+....
T Consensus       231 IN~aRG~~vd~~aL~~aL~~g~  252 (330)
T PRK12480        231 VNAARGAVINTPDLIAAVNDGT  252 (330)
T ss_pred             EEcCCccccCHHHHHHHHHcCC
Confidence            9999999999999998887653

>PRK13243 glyoxylate reductase; Reviewed

Probab=99.00  E-value=2.9e-09  Score=83.76  Aligned_cols=97  Identities=19%  Similarity=0.313  Sum_probs=82.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|.+|||++... .....+.. ..++.+++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       161 IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~-~~~l~ell~~aDiV~l~lP~t~~T~~~i~--~~~~~~mk~ga~l  236 (333)
T PRK13243        161 IGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAE-YRPLEELLRESDFVSLHVPLTKETYHMIN--EERLKLMKPTAIL  236 (333)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCE-ecCHHHHHhhCCEEEEeCCCChHHhhccC--HHHHhcCCCCeEE
Confidence            68999999999999999999987643 22333444 35899999999999999999998888873  6778889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhc
Q psy755           81 IDSSTVDPQVPQTLSNLAREK  101 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~  101 (183)
                      ||++.....+..++.+.+...
T Consensus       237 IN~aRg~~vd~~aL~~aL~~g  257 (333)
T PRK13243        237 VNTARGKVVDTKALVKALKEG  257 (333)
T ss_pred             EECcCchhcCHHHHHHHHHcC
Confidence            999999999999999988765

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=98.97  E-value=1.1e-09  Score=78.81  Aligned_cols=99  Identities=21%  Similarity=0.320  Sum_probs=80.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|++|||+..........+. ...+++++++.||+|++++|.....+.++  .++....+++|.++
T Consensus        47 IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~-~~~~l~ell~~aDiv~~~~plt~~T~~li--~~~~l~~mk~ga~l  123 (178)
T PF02826_consen   47 IGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGV-EYVSLDELLAQADIVSLHLPLTPETRGLI--NAEFLAKMKPGAVL  123 (178)
T ss_dssp             HHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTE-EESSHHHHHHH-SEEEE-SSSSTTTTTSB--SHHHHHTSTTTEEE
T ss_pred             CcCeEeeeeecCCceeEEecccCChhhhcccccc-eeeehhhhcchhhhhhhhhccccccceee--eeeeeeccccceEE
Confidence            5899999999999999999999987664555555 45599999999999999999888777776  36777889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      ||++.....+..++.+.+++.-
T Consensus       124 vN~aRG~~vde~aL~~aL~~g~  145 (178)
T PF02826_consen  124 VNVARGELVDEDALLDALESGK  145 (178)
T ss_dssp             EESSSGGGB-HHHHHHHHHTTS
T ss_pred             EeccchhhhhhhHHHHHHhhcc
Confidence            9999999999999998887653

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=98.95  E-value=2.6e-08  Score=77.65  Aligned_cols=137  Identities=18%  Similarity=0.162  Sum_probs=90.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEc-CCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYD-KNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||.++|++|.+.|++|++++ +++++.+.+.+.|+... ++.+++++||+|++++|+..+...++   +++.+.++++. 
T Consensus        14 mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~-s~~ea~~~ADiVvLaVpp~~~~~~v~---~ei~~~l~~g~-   88 (314)
T TIGR00465        14 QGHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVG-TVEEAIPQADLIMNLLPDEVQHEVYE---AEIQPLLKEGK-   88 (314)
T ss_pred             HHHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEEC-CHHHHHhcCCEEEEeCCcHhHHHHHH---HHHHhhCCCCc-
Confidence            79999999999999987765 44456666666677654 68888999999999999864565554   67888888786 


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHH-------hcCceEEE-ec--CCHHHHHHHHHHHHHhcCC
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAA-------QEATLTFM-VG--GDKSSLEKAKPILKCMGRN  146 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~-~~--g~~~~~~~~~~l~~~~g~~  146 (183)
                      ++..+...+..  .+...++ .+...+ ..+..+|...       ..|-..++ ..  -+.+..+.+..+++++|..
T Consensus        89 iVs~aaG~~i~--~~~~~~~-~~~~Vv-rvmPn~p~~~vr~~~~~G~G~~~l~a~~~~~~~~~~~~~~~~~~~iG~~  161 (314)
T TIGR00465        89 TLGFSHGFNIH--FVQIVPP-KDVDVV-MVAPKGPGTLVREEYKEGFGVPTLIAVEQDPTGEAMAIALAYAKAIGGG  161 (314)
T ss_pred             EEEEeCCccHh--hccccCC-CCCcEE-EECCCCCcHHHHHHhhcCCCeeEEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence            45555443332  2233332 233333 2334444442       44543443 32  3667788999999999986

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>PRK06436 glycerate dehydrogenase; Provisional

Probab=98.95  E-value=4.5e-09  Score=81.46  Aligned_cols=95  Identities=15%  Similarity=0.300  Sum_probs=80.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+.+|+.+...|++|++|||+...      .+.. ...++++++++||+|++++|...+++.++.  ++....+++|.+
T Consensus       133 IG~~vA~~l~afG~~V~~~~r~~~~------~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~--~~~l~~mk~ga~  204 (303)
T PRK06436        133 IGRRVALLAKAFGMNIYAYTRSYVN------DGISSIYMEPEDIMKKSDFVLISLPLTDETRGMIN--SKMLSLFRKGLA  204 (303)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCcc------cCcccccCCHHHHHhhCCEEEECCCCCchhhcCcC--HHHHhcCCCCeE
Confidence            6899999998889999999998532      2322 246899999999999999999999888873  667788999999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCC
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      +||++.....+..++.+.+.+..+
T Consensus       205 lIN~sRG~~vd~~aL~~aL~~g~i  228 (303)
T PRK06436        205 IINVARADVVDKNDMLNFLRNHND  228 (303)
T ss_pred             EEECCCccccCHHHHHHHHHcCCc
Confidence            999999999999999998887533

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=98.87  E-value=9.7e-09  Score=80.02  Aligned_cols=99  Identities=15%  Similarity=0.252  Sum_probs=81.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|.+||+++........  .....++++++++||+|++++|...+++.++.  .+....+++|.++
T Consensus       147 IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~--~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~--~~~l~~mk~ga~l  222 (312)
T PRK15469        147 LGSKVAQSLQTWGFPLRCWSRSRKSWPGVQS--FAGREELSAFLSQTRVLINLLPNTPETVGIIN--QQLLEQLPDGAYL  222 (312)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCCCCCCCcee--ecccccHHHHHhcCCEEEECCCCCHHHHHHhH--HHHHhcCCCCcEE
Confidence            6899999999999999999987754321111  11235789999999999999999999999884  6678889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      ||++.....+..++.+.+.+..+
T Consensus       223 IN~aRG~vVde~aL~~aL~~g~i  245 (312)
T PRK15469        223 LNLARGVHVVEDDLLAALDSGKV  245 (312)
T ss_pred             EECCCccccCHHHHHHHHhcCCe
Confidence            99999999999999988887543

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=98.86  E-value=1.4e-08  Score=84.42  Aligned_cols=100  Identities=21%  Similarity=0.291  Sum_probs=83.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++||++.. .+.....+....+++++++++||+|++++|...+++.++.  .+..+.+++|.++
T Consensus       149 IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~--~~~l~~mk~ga~l  225 (525)
T TIGR01327       149 IGSIVAKRAKAFGMKVLAYDPYIS-PERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLIG--AEELAKMKKGVII  225 (525)
T ss_pred             HHHHHHHHHHhCCCEEEEECCCCC-hhHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCcC--HHHHhcCCCCeEE
Confidence            689999999999999999998643 2333445666567899999999999999999988888872  5667789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      ||++.....+..++.+.+....+
T Consensus       226 IN~aRG~~vde~aL~~aL~~g~i  248 (525)
T TIGR01327       226 VNCARGGIIDEAALYEALEEGHV  248 (525)
T ss_pred             EEcCCCceeCHHHHHHHHHcCCe
Confidence            99999999999999998887644

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK08605 D-lactate dehydrogenase; Validated

Probab=98.85  E-value=1.4e-08  Score=79.93  Aligned_cols=98  Identities=18%  Similarity=0.288  Sum_probs=78.6

Q ss_pred             CcHHHHHHH-HhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNL-LKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l-~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+++|+.| ...|++|++||+++....   ...+...+++++++++||+|++++|.....+.++ + +++.+.+++|.+
T Consensus       157 IG~~vA~~L~~~~g~~V~~~d~~~~~~~---~~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li-~-~~~l~~mk~gai  231 (332)
T PRK08605        157 IGLAVAKIFAKGYGSDVVAYDPFPNAKA---ATYVDYKDTIEEAVEGADIVTLHMPATKYNHYLF-N-ADLFKHFKKGAV  231 (332)
T ss_pred             HHHHHHHHHHhcCCCEEEEECCCccHhH---HhhccccCCHHHHHHhCCEEEEeCCCCcchhhhc-C-HHHHhcCCCCcE
Confidence            689999999 456889999999876431   1234455689999999999999999988777654 2 556788999999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCC
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      +||+|.+...+..++.+.+....+
T Consensus       232 lIN~sRG~~vd~~aL~~aL~~g~i  255 (332)
T PRK08605        232 FVNCARGSLVDTKALLDALDNGLI  255 (332)
T ss_pred             EEECCCCcccCHHHHHHHHHhCCe
Confidence            999999999999999988876533

>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase

Probab=98.80  E-value=1.2e-07  Score=73.20  Aligned_cols=159  Identities=20%  Similarity=0.169  Sum_probs=101.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--------------cCCHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--------------ALSLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--------------~~~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||..+|..|.+.|++|++++|+ ++.+.+.+.|...              .+++++ ....|+||++++.. +++.++  
T Consensus         2 iG~~~a~~L~~~G~~V~l~~r~-~~~~~i~~~Gl~i~~~~~~~~~~~~~~~~~~~~-~~~~D~iiv~vKs~-~~~~~l--   76 (293)
T TIGR00745         2 VGSLYGAYLARAGHDVTLLARG-EQLEALNQEGLRIVSLGGEFQFRPVSAATSPEE-LPPADLVIITVKAY-QTEEAA--   76 (293)
T ss_pred             chHHHHHHHHhCCCcEEEEecH-HHHHHHHHCCcEEEecCCcEEEcccccccChhh-cCCCCEEEEeccch-hHHHHH--
Confidence            7999999999999999999997 6667776654211              112333 56899999999885 567776  


Q ss_pred             CccccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccC-C-HHHHhcCceEEEec-CCHHHHHHHHHH
Q psy755           67 SDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSG-G-TKAAQEATLTFMVG-GDKSSLEKAKPI  139 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~-~-~~~~~~~~~~~~~~-g~~~~~~~~~~l  139 (183)
                       +.+.+.+.++++|+...+..... +.+.+.+.+.    |..++.+...+ + ......+...+-.. ++.+..+.+.++
T Consensus        77 -~~l~~~l~~~~~iv~~qNG~g~~-~~l~~~~~~~~v~~g~~~~~~~~~~pg~v~~~~~~~~~iG~~~~~~~~~~~l~~~  154 (293)
T TIGR00745        77 -ALLLPLIGKNTKVLFLQNGLGHE-ERLRELLPARRILGGVVTHGAVREEPGVVHHAGLGATKIGDYVGENEAVEALAEL  154 (293)
T ss_pred             -HHhHhhcCCCCEEEEccCCCCCH-HHHHHHhCccCEEEEEEEEeeEEcCCcEEEEeccccEEEecCCCchHHHHHHHHH
Confidence             88899998889888877765433 3344444322    11112111111 1 01111233222111 122445677788


Q ss_pred             HHHhcCCeEEeCCcchHHHHHHHHHHH
Q psy755          140 LKCMGRNIVHCGDSGNGQVAKLCNNML  166 (183)
Q Consensus       140 ~~~~g~~~~~~g~~g~a~~~k~~~~~~  166 (183)
                      |+..|.++....+.-...+.|++.|..
T Consensus       155 l~~~~~~~~~~~di~~~~w~Kl~~N~~  181 (293)
T TIGR00745       155 LNEAGIPAELHGDILAAIWKKLLVNAA  181 (293)
T ss_pred             HHhCCCCCEecchHHHHHHHHHhheec
Confidence            888888877778888899999988863

This model describes enzymes that perform as 2-dehydropantoate 2-reductase, one of four enzymes required for the de novo biosynthesis of pantothenate (vitamin B5) from Asp and 2-oxoisovalerate. Although few members of the seed alignment are characterized experimentally, nearly all from complete genomes are found in a genome-wide (but not local) context of all three other pantothenate-biosynthetic enzymes (TIGR00222, TIGR00018, TIGR00223). The gene encoding this enzyme is designated apbA in Salmonella typhimurium and panE in Escherichia coli; this protein functions as a monomer and functions in the alternative pyrimidine biosynthetic, or APB, pathway, used to synthesize the pyrimidine moiety of thiamine. Note, synthesis of the pyrimidine moiety of thiamine occurs either via the first five steps in de novo purine biosynthesis, which uses the pur gene products, or through the APB pathway. Note that this family includes both NADH and NADPH

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=98.80  E-value=3e-08  Score=77.48  Aligned_cols=98  Identities=21%  Similarity=0.325  Sum_probs=83.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+++...|.+|..|||++. -+.....+..+.+ +++++++||+|++.+|...+..+++.  .+....+++|.++
T Consensus       157 IG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~~-l~ell~~sDii~l~~Plt~~T~hLin--~~~l~~mk~ga~l  232 (324)
T COG1052         157 IGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYVD-LDELLAESDIISLHCPLTPETRHLIN--AEELAKMKPGAIL  232 (324)
T ss_pred             HHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceecc-HHHHHHhCCEEEEeCCCChHHhhhcC--HHHHHhCCCCeEE
Confidence            589999999988899999999986 3333333456665 99999999999999999999999884  7778889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      |+++...-.+..++.+.+++..
T Consensus       233 VNtaRG~~VDe~ALi~AL~~g~  254 (324)
T COG1052         233 VNTARGGLVDEQALIDALKSGK  254 (324)
T ss_pred             EECCCccccCHHHHHHHHHhCC
Confidence            9999999999999999988753

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=98.80  E-value=2.1e-08  Score=77.49  Aligned_cols=78  Identities=21%  Similarity=0.328  Sum_probs=64.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.++|++|...|++|++|++...+.+.+.+.|.... ++.++++.||+|++++|++++ +.++.  +++.+.+++|.++
T Consensus        27 IG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~-sl~Eaak~ADVV~llLPd~~t-~~V~~--~eil~~MK~GaiL  102 (335)
T PRK13403         27 QGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVM-SVSEAVRTAQVVQMLLPDEQQ-AHVYK--AEVEENLREGQML  102 (335)
T ss_pred             HHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEEC-CHHHHHhcCCEEEEeCCChHH-HHHHH--HHHHhcCCCCCEE
Confidence            7999999999999999999877655555666676554 899999999999999998654 67763  5788999999987


Q ss_pred             Ee
Q psy755           81 ID   82 (183)
Q Consensus        81 id   82 (183)
                      +-
T Consensus       103 ~f  104 (335)
T PRK13403        103 LF  104 (335)
T ss_pred             EE
Confidence            63

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=98.80  E-value=2.9e-08  Score=82.64  Aligned_cols=98  Identities=24%  Similarity=0.339  Sum_probs=82.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++||++... +.....+.... ++.++++.||+|++++|...+++.++.  .+..+.+++|.++
T Consensus       151 IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~~~-~l~ell~~aDiV~l~lP~t~~t~~li~--~~~l~~mk~ga~l  226 (526)
T PRK13581        151 IGSEVAKRAKAFGMKVIAYDPYISP-ERAAQLGVELV-SLDELLARADFITLHTPLTPETRGLIG--AEELAKMKPGVRI  226 (526)
T ss_pred             HHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCCEEE-cHHHHHhhCCEEEEccCCChHhhcCcC--HHHHhcCCCCeEE
Confidence            6899999999999999999987542 33344566655 899999999999999999998888873  6678889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      ||++.....+..++.+.+....
T Consensus       227 IN~aRG~~vde~aL~~aL~~g~  248 (526)
T PRK13581        227 INCARGGIIDEAALAEALKSGK  248 (526)
T ss_pred             EECCCCceeCHHHHHHHHhcCC
Confidence            9999999999999998887653

>KOG2305|consensus

Probab=98.78  E-value=3.2e-08  Score=72.30  Aligned_cols=164  Identities=18%  Similarity=0.182  Sum_probs=107.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------cC--------------CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------EG--------------ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g--------------~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      .|++.|..|+..||+|..||..+..+..+.+           .|              +..++++.|+++++=.|-.|+|
T Consensus        14 ~g~~WAmlFAs~GyqVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E~vk~Ai~iQEcvp   93 (313)
T KOG2305|consen   14 VGSSWAMLFASSGYQVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNELVKGAIHIQECVP   93 (313)
T ss_pred             ccchHHHHHhccCceEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHHHHhhhhhHHhhch
Confidence            4789999999999999999999876543322           11              4567789999999999999999


Q ss_pred             ChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHH
Q psy755           56 ASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEK  135 (183)
Q Consensus        56 ~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  135 (183)
                      ....++.-++  ..+.+.+.+.+++-..++..+. + ...+-+..+.--.+.||+....- ...-+.+-..-.+++.+++
T Consensus        94 E~L~lkk~ly--~qlD~i~d~~tIlaSSTSt~mp-S-~~s~gL~~k~q~lvaHPvNPPyf-iPLvElVPaPwTsp~tVdr  168 (313)
T KOG2305|consen   94 EDLNLKKQLY--KQLDEIADPTTILASSTSTFMP-S-KFSAGLINKEQCLVAHPVNPPYF-IPLVELVPAPWTSPDTVDR  168 (313)
T ss_pred             HhhHHHHHHH--HHHHHhcCCceEEeccccccCh-H-HHhhhhhhhhheeEecCCCCCcc-cchheeccCCCCChhHHHH
Confidence            9998888776  6666666555554433333222 2 22223333333345556554210 0000111111257788999


Q ss_pred             HHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHH
Q psy755          136 AKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGV  169 (183)
Q Consensus       136 ~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~  169 (183)
                      .+++.+++|.+++....+..|..+..++..+..-
T Consensus       169 t~~lM~sigq~pV~l~rei~Gf~lnriq~Ailne  202 (313)
T KOG2305|consen  169 TRALMRSIGQEPVTLKREILGFALNRIQYAILNE  202 (313)
T ss_pred             HHHHHHHhCCCCcccccccccceeccccHHHHHH
Confidence            9999999999998887666677777666655443

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=98.73  E-value=4.3e-08  Score=76.61  Aligned_cols=98  Identities=22%  Similarity=0.272  Sum_probs=82.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|.++...|++|.+||+...+- .....+....++++++++.||+|++.+|....++.++.  .+....+++|.++
T Consensus       153 IG~~va~~l~afgm~v~~~d~~~~~~-~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~--~~~~a~MK~gail  229 (324)
T COG0111         153 IGRAVAKRLKAFGMKVIGYDPYSPRE-RAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLIN--AEELAKMKPGAIL  229 (324)
T ss_pred             HHHHHHHHHHhCCCeEEEECCCCchh-hhccccceecccHHHHHhhCCEEEEcCCCCcchhcccC--HHHHhhCCCCeEE
Confidence            58999999999999999999944331 22233556677999999999999999999999999883  6667789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhc
Q psy755           81 IDSSTVDPQVPQTLSNLAREK  101 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~  101 (183)
                      ||++.....+..++.+.++.-
T Consensus       230 IN~aRG~vVde~aL~~AL~~G  250 (324)
T COG0111         230 INAARGGVVDEDALLAALDSG  250 (324)
T ss_pred             EECCCcceecHHHHHHHHHcC
Confidence            999999999999999988764

>PLN02928 oxidoreductase family protein

Probab=98.71  E-value=5.6e-08  Score=76.89  Aligned_cols=98  Identities=11%  Similarity=0.150  Sum_probs=79.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH------------HHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL------------AKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~------------~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      ||+.+|+.|...|++|++|||+.......            ..... ...++.+++++||+|++++|.....+.++.  +
T Consensus       170 IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~ell~~aDiVvl~lPlt~~T~~li~--~  246 (347)
T PLN02928        170 IGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKG-GHEDIYEFAGEADIVVLCCTLTKETAGIVN--D  246 (347)
T ss_pred             HHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccC-cccCHHHHHhhCCEEEECCCCChHhhcccC--H
Confidence            68999999999999999999985432111            00112 345899999999999999999988888873  6


Q ss_pred             cccccCCCCcEEEeccCCCchhHHHHHHHHHhc
Q psy755           69 GILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK  101 (183)
Q Consensus        69 ~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~  101 (183)
                      +....+++|.++||++.+.-.+..++.+.+...
T Consensus       247 ~~l~~Mk~ga~lINvaRG~lVde~AL~~AL~~g  279 (347)
T PLN02928        247 EFLSSMKKGALLVNIARGGLLDYDAVLAALESG  279 (347)
T ss_pred             HHHhcCCCCeEEEECCCccccCHHHHHHHHHcC
Confidence            778889999999999999999988999888764

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=98.70  E-value=2.3e-07  Score=72.55  Aligned_cols=160  Identities=14%  Similarity=0.149  Sum_probs=101.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-------------cCCHHHHhccCCEEEEecCChHHHHHHhcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-------------ALSLSTLASGAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------------~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      ||+.+|..|+++|++|.++.|++.  +.....|...             ..+..+....+|+||+|||..+ +..++   
T Consensus        16 iG~~lA~~L~~~g~~V~~~~r~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~~-~~~~~---   89 (313)
T PRK06249         16 IGGFYGAMLARAGFDVHFLLRSDY--EAVRENGLQVDSVHGDFHLPPVQAYRSAEDMPPCDWVLVGLKTTA-NALLA---   89 (313)
T ss_pred             HHHHHHHHHHHCCCeEEEEEeCCH--HHHHhCCeEEEeCCCCeeecCceEEcchhhcCCCCEEEEEecCCC-hHhHH---
Confidence            689999999999999999999863  3444433211             0112234568999999998854 55665   


Q ss_pred             ccccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccCC--HHHHhcCceEEEe-cCC------HHHHH
Q psy755           68 DGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSGG--TKAAQEATLTFMV-GGD------KSSLE  134 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~--~~~~~~~~~~~~~-~g~------~~~~~  134 (183)
                      +.+.+.+.++..|+...+..... ..+.+.+++.    ++.++.+...+.  ......+...+-. .++      .+..+
T Consensus        90 ~~l~~~~~~~~~iv~lqNG~~~~-e~l~~~~~~~~v~~g~~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~~~~~  168 (313)
T PRK06249         90 PLIPQVAAPDAKVLLLQNGLGVE-EQLREILPAEHLLGGLCFICSNRVGPGVIHHLAYGRVNLGYHSGPAADDGITARVE  168 (313)
T ss_pred             HHHhhhcCCCCEEEEecCCCCcH-HHHHHHCCCCcEEEEeeeEeEecCCCeEEEECCCCcEEEecCCCCcccchHHHHHH
Confidence            77888888888888877765432 3344444332    222333222221  0111223433221 222      35566


Q ss_pred             HHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHH
Q psy755          135 KAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLL  167 (183)
Q Consensus       135 ~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~  167 (183)
                      .+.++|+..|..+....+.-...+.|++.|...
T Consensus       169 ~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~  201 (313)
T PRK06249        169 EGAALFRAAGIDSQAMPDLAQARWQKLVWNIPY  201 (313)
T ss_pred             HHHHHHHhCCCCceeCchHHHHHHhHhheecch
Confidence            788889999998888888999999999988644

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.69  E-value=1.5e-07  Score=72.65  Aligned_cols=99  Identities=19%  Similarity=0.238  Sum_probs=75.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|...|++|++++|++++.+++.+.+...  .+++.+.++++|+||.++|.....       .+..+.++++.
T Consensus       162 iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~aDiVint~P~~ii~-------~~~l~~~k~~a  234 (287)
T TIGR02853       162 TGMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEIDIVINTIPALVLT-------ADVLSKLPKHA  234 (287)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccCCEEEECCChHHhC-------HHHHhcCCCCe
Confidence            689999999999999999999998877776666432  235677889999999999874211       33446678899


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      +++|+++....+..   +..++.|.+.+-+|
T Consensus       235 liIDlas~Pg~tdf---~~Ak~~G~~a~~~~  262 (287)
T TIGR02853       235 VIIDLASKPGGTDF---EYAKKRGIKALLAP  262 (287)
T ss_pred             EEEEeCcCCCCCCH---HHHHHCCCEEEEeC
Confidence            99999987766543   45567788766554

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK11861 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=98.68  E-value=2.8e-07  Score=78.98  Aligned_cols=123  Identities=11%  Similarity=0.144  Sum_probs=96.5

Q ss_pred             EEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHH----Hh----cC
Q psy755           50 IISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKA----AQ----EA  120 (183)
Q Consensus        50 Vi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~----~~----~~  120 (183)
                      ||+|+|. ..+..++   +++.+.++++++|.|.++++.....++.+.+.....+|+. |||+|....    +.    .+
T Consensus         1 vila~Pv-~~~~~~~---~~~~~~~~~~~~vtDv~SvK~~i~~~~~~~l~~~~~~fvg~HPMaG~e~~G~~~a~~~Lf~~   76 (673)
T PRK11861          1 VLLAAPV-AQTGPLL---ARIAPFLDASTIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAGRESSGVDAALADLYVG   76 (673)
T ss_pred             CEEEcCH-HHHHHHH---HHHhhhCCCCcEEEecCcccHHHHHHHHHhccccCCeEEecCCcCcCcchhhhhhChhHhCC
Confidence            6899987 5566666   8999999999999999999998888877766543356888 899995422    21    46


Q ss_pred             ceEEEecC---CHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHH
Q psy755          121 TLTFMVGG---DKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAE  176 (183)
Q Consensus       121 ~~~~~~~g---~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E  176 (183)
                      ..++++..   +++.++.++++++.+|.+++.+++...-..+-.++.+-+-...+.++.
T Consensus        77 ~~~il~p~~~~~~~~~~~~~~l~~~~Ga~~~~~~~~~HD~~~A~iShlpH~~a~~l~~~  135 (673)
T PRK11861         77 RNVVLCALPENAPDALARVEAMWRAARADVRAMSAEQHDRVFAAVSHLPHVLSFALVEQ  135 (673)
T ss_pred             CeEEEecCCCCCHHHHHHHHHHHHHcCCEEEECCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            66777743   567889999999999999999999888999888887777666555543

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=98.68  E-value=2.2e-07  Score=72.46  Aligned_cols=96  Identities=22%  Similarity=0.257  Sum_probs=79.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|.+|||+....    ..+.. ..+++++++.||+|++++|....++.++.  ++..+.+++|.++
T Consensus       156 IG~~vA~~~~~fgm~V~~~d~~~~~~----~~~~~-~~~l~ell~~sDvv~lh~Plt~~T~~li~--~~~~~~Mk~~a~l  228 (311)
T PRK08410        156 IGKRVAKIAQAFGAKVVYYSTSGKNK----NEEYE-RVSLEELLKTSDIISIHAPLNEKTKNLIA--YKELKLLKDGAIL  228 (311)
T ss_pred             HHHHHHHHHhhcCCEEEEECCCcccc----ccCce-eecHHHHhhcCCEEEEeCCCCchhhcccC--HHHHHhCCCCeEE
Confidence            58899999999999999999875321    12332 44899999999999999999998888873  6777889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      |+++.+.-.+..++.+.++...+
T Consensus       229 IN~aRG~vVDe~AL~~AL~~g~i  251 (311)
T PRK08410        229 INVGRGGIVNEKDLAKALDEKDI  251 (311)
T ss_pred             EECCCccccCHHHHHHHHHcCCe
Confidence            99999999999999998876533

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=98.68  E-value=6.5e-08  Score=67.43  Aligned_cols=79  Identities=23%  Similarity=0.361  Sum_probs=59.1

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch-hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      |.+-|.+|.+.|++|++..|... +.+++.+.|.... +..|+++.+|+|++.+|+. ....++.  +++.|.|++|+++
T Consensus        16 G~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~-~~~eAv~~aDvV~~L~PD~-~q~~vy~--~~I~p~l~~G~~L   91 (165)
T PF07991_consen   16 GHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVM-SVAEAVKKADVVMLLLPDE-VQPEVYE--EEIAPNLKPGATL   91 (165)
T ss_dssp             HHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECC-EHHHHHHC-SEEEE-S-HH-HHHHHHH--HHHHHHS-TT-EE
T ss_pred             HHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeec-cHHHHHhhCCEEEEeCChH-HHHHHHH--HHHHhhCCCCCEE
Confidence            78899999999999999988877 7888888888765 8999999999999999984 4556653  7889999999988


Q ss_pred             Eecc
Q psy755           81 IDSS   84 (183)
Q Consensus        81 id~s   84 (183)
                      +=..
T Consensus        92 ~fah   95 (165)
T PF07991_consen   92 VFAH   95 (165)
T ss_dssp             EESS
T ss_pred             EeCC
Confidence            6433

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=98.65  E-value=1.5e-07  Score=73.68  Aligned_cols=98  Identities=13%  Similarity=0.204  Sum_probs=80.2

Q ss_pred             CcHHHHHHHH-hCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLL-KNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~-~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+.+|+.+. ..|.+|.+||+.... +.....+... .++++++++||+|++++|....++.++.  .+....+++|.+
T Consensus       156 IG~~va~~l~~~fgm~V~~~~~~~~~-~~~~~~~~~~-~~l~ell~~sDvv~lh~plt~~T~~li~--~~~l~~mk~ga~  231 (323)
T PRK15409        156 IGMALAQRAHFGFNMPILYNARRHHK-EAEERFNARY-CDLDTLLQESDFVCIILPLTDETHHLFG--AEQFAKMKSSAI  231 (323)
T ss_pred             HHHHHHHHHHhcCCCEEEEECCCCch-hhHHhcCcEe-cCHHHHHHhCCEEEEeCCCChHHhhccC--HHHHhcCCCCeE
Confidence            5889999987 788999999987532 2222335444 4899999999999999999999888873  667888999999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcC
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g  102 (183)
                      +|+++...-.+..++.+.+....
T Consensus       232 lIN~aRG~vVde~AL~~AL~~g~  254 (323)
T PRK15409        232 FINAGRGPVVDENALIAALQKGE  254 (323)
T ss_pred             EEECCCccccCHHHHHHHHHcCC
Confidence            99999999999999999888653

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=98.64  E-value=1.6e-07  Score=75.89  Aligned_cols=97  Identities=19%  Similarity=0.237  Sum_probs=81.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|.+|.+||+++...    ..+.....+++++++.||+|++++|....++.++.  ++....+++|.++
T Consensus       162 IG~~vA~~~~~fGm~V~~~d~~~~~~----~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~--~~~l~~mk~ga~l  235 (409)
T PRK11790        162 IGTQLSVLAESLGMRVYFYDIEDKLP----LGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIG--AEELALMKPGAIL  235 (409)
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcccc----cCCceecCCHHHHHhhCCEEEEcCCCChHHhhccC--HHHHhcCCCCeEE
Confidence            58899999999999999999875321    12344556899999999999999999998888873  6677889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      |+++.+...+..++.+.+....+
T Consensus       236 IN~aRG~~vde~aL~~aL~~g~i  258 (409)
T PRK11790        236 INASRGTVVDIDALADALKSGHL  258 (409)
T ss_pred             EECCCCcccCHHHHHHHHHcCCc
Confidence            99999999999999998887543

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=98.60  E-value=2.1e-07  Score=74.27  Aligned_cols=94  Identities=21%  Similarity=0.279  Sum_probs=76.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChH----HHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQ----DVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~----~~~~v~~~~~~l~~~l~~   76 (183)
                      ||+.+|+.+...|++|.+||+.....     .+.....++++++++||+|++++|...    .+..++  .++....+++
T Consensus       127 IG~~va~~l~a~G~~V~~~Dp~~~~~-----~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~T~~li--~~~~l~~mk~  199 (381)
T PRK00257        127 VGGRLVRVLRGLGWKVLVCDPPRQEA-----EGDGDFVSLERILEECDVISLHTPLTKEGEHPTRHLL--DEAFLASLRP  199 (381)
T ss_pred             HHHHHHHHHHHCCCEEEEECCccccc-----ccCccccCHHHHHhhCCEEEEeCcCCCCccccccccC--CHHHHhcCCC
Confidence            68999999999999999999764321     122234589999999999999999865    355655  2567788999


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhc
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREK  101 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~  101 (183)
                      |.++||++.+...+..++.+.+...
T Consensus       200 gailIN~aRG~vVde~AL~~aL~~g  224 (381)
T PRK00257        200 GAWLINASRGAVVDNQALREALLSG  224 (381)
T ss_pred             CeEEEECCCCcccCHHHHHHHHHhC
Confidence            9999999999999999999888765

>PRK06487 glycerate dehydrogenase; Provisional

Probab=98.58  E-value=5.5e-07  Score=70.48  Aligned_cols=93  Identities=18%  Similarity=0.219  Sum_probs=78.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|.+||+.... .     ... ..+++++++.||+|++++|....++.++.  ++..+.+++|.++
T Consensus       159 IG~~vA~~l~~fgm~V~~~~~~~~~-~-----~~~-~~~l~ell~~sDiv~l~lPlt~~T~~li~--~~~~~~mk~ga~l  229 (317)
T PRK06487        159 LGGAVARLAEAFGMRVLIGQLPGRP-A-----RPD-RLPLDELLPQVDALTLHCPLTEHTRHLIG--ARELALMKPGALL  229 (317)
T ss_pred             HHHHHHHHHhhCCCEEEEECCCCCc-c-----ccc-ccCHHHHHHhCCEEEECCCCChHHhcCcC--HHHHhcCCCCeEE
Confidence            5889999999999999999986431 1     112 34899999999999999999998888873  7778899999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      |+++...-.+..++.+.+....
T Consensus       230 IN~aRG~vVde~AL~~AL~~g~  251 (317)
T PRK06487        230 INTARGGLVDEQALADALRSGH  251 (317)
T ss_pred             EECCCccccCHHHHHHHHHcCC
Confidence            9999999999999999888653

>PRK00961 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional

Probab=98.52  E-value=2.1e-06  Score=64.45  Aligned_cols=111  Identities=17%  Similarity=0.188  Sum_probs=86.1

Q ss_pred             CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCc---EEeec
Q psy755           33 GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQIT---FLDAP  109 (183)
Q Consensus        33 g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~---~~~~~  109 (183)
                      |+..+++-.|+++++|++|+=+|.+.....++   +.+.+++++|.+|.+.++.+|...-.+.+.+.++.+.   |..+.
T Consensus       128 GvkVtsDD~EAvk~aei~I~ftPfG~~t~~Ii---kki~~~ipEgAII~~tCTIpt~~ly~~le~l~R~DvgIsS~HPaa  204 (342)
T PRK00961        128 GLKVTTDDREAVADADIVITWLPKGGMQPDII---EKFADDIKEGAIVTHACTIPTTKFAKIFKDLGRDDLNVTSYHPGA  204 (342)
T ss_pred             CceEecCcHHHhcCCCEEEEecCCCCCchHHH---HHHHhhCCCCCEEeccccCCHHHHHHHHHHhCcccCCeeccCCCC
Confidence            57777888889999999999999988777777   8999999999999999999998877777776655433   33344


Q ss_pred             ccCCHHHHhcCceEEEec-CCHHHHHHHHHHHHHhcCCeEEeC
Q psy755          110 VSGGTKAAQEATLTFMVG-GDKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      +.+.+     |+..+-.+ .++++.+++.+|.++.++..+.+-
T Consensus       205 VPgt~-----Gq~~i~egyAtEEqI~klveL~~sa~k~ay~~P  242 (342)
T PRK00961        205 VPEMK-----GQVYIAEGYADEEAVEKLYEIGKKARGNAFKMP  242 (342)
T ss_pred             CCCCC-----CceecccccCCHHHHHHHHHHHHHhCCCeeecc
Confidence            55544     43333222 488999999999999999877654

>PRK06932 glycerate dehydrogenase; Provisional

Probab=98.50  E-value=7.2e-07  Score=69.72  Aligned_cols=95  Identities=14%  Similarity=0.169  Sum_probs=78.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|.+||++....  .   . ....++++++..||+|++++|....++.++.  ++....+++|.++
T Consensus       158 IG~~va~~l~~fg~~V~~~~~~~~~~--~---~-~~~~~l~ell~~sDiv~l~~Plt~~T~~li~--~~~l~~mk~ga~l  229 (314)
T PRK06932        158 LGTEVGRLAQALGMKVLYAEHKGASV--C---R-EGYTPFEEVLKQADIVTLHCPLTETTQNLIN--AETLALMKPTAFL  229 (314)
T ss_pred             HHHHHHHHHhcCCCEEEEECCCcccc--c---c-cccCCHHHHHHhCCEEEEcCCCChHHhcccC--HHHHHhCCCCeEE
Confidence            58899999999999999999864311  0   1 1235899999999999999999998888873  6778889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      |+++...-.+..++.+.++...+
T Consensus       230 IN~aRG~~Vde~AL~~aL~~g~i  252 (314)
T PRK06932        230 INTGRGPLVDEQALLDALENGKI  252 (314)
T ss_pred             EECCCccccCHHHHHHHHHcCCc
Confidence            99999999999999998886533

>KOG0069|consensus

Probab=98.49  E-value=8e-07  Score=69.23  Aligned_cols=97  Identities=11%  Similarity=0.213  Sum_probs=84.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..+|++|...|..+..+.|++...+...+.+.. ..+.++.+.++|+|++++|....+.+++.  +++...+++|.+|
T Consensus       173 IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~-~~d~~~~~~~sD~ivv~~pLt~~T~~liN--k~~~~~mk~g~vl  249 (336)
T KOG0069|consen  173 IGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAE-FVDIEELLANSDVIVVNCPLTKETRHLIN--KKFIEKMKDGAVL  249 (336)
T ss_pred             HHHHHHHhhhhccceeeeecccCCchhhHHHhccc-ccCHHHHHhhCCEEEEecCCCHHHHHHhh--HHHHHhcCCCeEE
Confidence            68999999999996677778988877777665544 45899999999999999999999999984  8888999999999


Q ss_pred             EeccCCCchhHHHHHHHHHh
Q psy755           81 IDSSTVDPQVPQTLSNLARE  100 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~  100 (183)
                      |+++...-.+.+++.+.+++
T Consensus       250 VN~aRG~iide~~l~eaL~s  269 (336)
T KOG0069|consen  250 VNTARGAIIDEEALVEALKS  269 (336)
T ss_pred             EeccccccccHHHHHHHHhc
Confidence            99999999998899888775

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.48  E-value=4.5e-07  Score=69.79  Aligned_cols=64  Identities=23%  Similarity=0.333  Sum_probs=53.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..||..|.++|++|++|++...              ++.+.+++||+||.+++.+..++..         .+++|.+|
T Consensus       171 vG~PmA~~L~~~gatVtv~~~~t~--------------~l~e~~~~ADIVIsavg~~~~v~~~---------~ik~GaiV  227 (301)
T PRK14194        171 VGKPMAALLLQAHCSVTVVHSRST--------------DAKALCRQADIVVAAVGRPRLIDAD---------WLKPGAVV  227 (301)
T ss_pred             cHHHHHHHHHHCCCEEEEECCCCC--------------CHHHHHhcCCEEEEecCChhcccHh---------hccCCcEE
Confidence            899999999999999999976542              7888899999999999987655444         37899999


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      ||+|...
T Consensus       228 IDvgin~  234 (301)
T PRK14194        228 IDVGINR  234 (301)
T ss_pred             EEecccc
Confidence            9999543

>KOG2380|consensus

Probab=98.47  E-value=4.4e-06  Score=64.74  Aligned_cols=145  Identities=18%  Similarity=0.270  Sum_probs=104.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCcccccc-CCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGILKH-AKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~~~-l~~~~   78 (183)
                      ||.-+|..|.++||.|...||+. .-+....-|....+.+.+.+ +.+|+|++|+.. ..+++++   ....+. ++.|+
T Consensus        63 mGqflAetli~aGh~li~hsRsd-yssaa~~yg~~~ft~lhdlcerhpDvvLlctsi-lsiekil---atypfqrlrrgt  137 (480)
T KOG2380|consen   63 MGQFLAETLIDAGHGLICHSRSD-YSSAAEKYGSAKFTLLHDLCERHPDVVLLCTSI-LSIEKIL---ATYPFQRLRRGT  137 (480)
T ss_pred             HHHHHHHHHHhcCceeEecCcch-hHHHHHHhcccccccHHHHHhcCCCEEEEEehh-hhHHHHH---HhcCchhhccce
Confidence            79999999999999999999998 33333444777777777766 479999999965 7788887   555554 88999


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEE-eecccCCHHHHhc--C-ceEEE-e-cC----CHHHHHHHHHHHHHhcCCeE
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFL-DAPVSGGTKAAQE--A-TLTFM-V-GG----DKSSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~--~-~~~~~-~-~g----~~~~~~~~~~l~~~~g~~~~  148 (183)
                      +++|..+++.-........+++. +..+ -|||+|..+....  | ++++. . .+    .++-.+.+.+++...|.+.+
T Consensus       138 lfvdvlSvKefek~lfekYLPkd-fDIlctHpmfGPksvnh~wqglpfVydkvRig~~~~r~ercE~fleIf~cegckmV  216 (480)
T KOG2380|consen  138 LFVDVLSVKEFEKELFEKYLPKD-FDILCTHPMFGPKSVNHEWQGLPFVYDKVRIGYAASRPERCEFFLEIFACEGCKMV  216 (480)
T ss_pred             eEeeeeecchhHHHHHHHhCccc-cceEeecCCcCCCcCCCccccCceEEEEeeccccccchHHHHHHHHHHHhcCCeEE
Confidence            99999999988877777776654 3333 3788875421111  1 22222 1 12    36778899999999999888


Q ss_pred             EeC
Q psy755          149 HCG  151 (183)
Q Consensus       149 ~~g  151 (183)
                      ++.
T Consensus       217 emS  219 (480)
T KOG2380|consen  217 EMS  219 (480)
T ss_pred             EEE
Confidence            775

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.45  E-value=1.4e-06  Score=67.49  Aligned_cols=98  Identities=20%  Similarity=0.248  Sum_probs=73.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc--CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA--LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|+.++..|.+.|.+|+++||++++.+.+...|....  +++.+.+.++|+||.++|...-.       ++..+.++++.
T Consensus       163 iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI~t~p~~~i~-------~~~l~~~~~g~  235 (296)
T PRK08306        163 TGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKIDIIFNTIPALVLT-------KEVLSKMPPEA  235 (296)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEEECCChhhhh-------HHHHHcCCCCc
Confidence            5788999999999999999999988777776665432  35677889999999999864221       33456678999


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEee
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      +|+|+++....+..   +..++.|+..+..
T Consensus       236 vIIDla~~pggtd~---~~a~~~Gv~~~~~  262 (296)
T PRK08306        236 LIIDLASKPGGTDF---EYAEKRGIKALLA  262 (296)
T ss_pred             EEEEEccCCCCcCe---eehhhCCeEEEEE
Confidence            99999987655432   3445667766653

>PLN02306 hydroxypyruvate reductase

Probab=98.44  E-value=1.8e-06  Score=69.12  Aligned_cols=99  Identities=16%  Similarity=0.148  Sum_probs=78.5

Q ss_pred             CcHHHHHHHH-hCCCcEEEEcCCchh-HHHHH-HcC------------CcccCCHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLL-KNGHDVIVYDKNTDA-SQTLA-KEG------------ANMALSLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~-~~g~~V~~~~~~~~~-~~~~~-~~g------------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      +|+.+|+.+. ..|.+|.+||++... .+... ..+            .....+++++++.||+|++++|....++.++.
T Consensus       176 IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV~lh~Plt~~T~~lin  255 (386)
T PLN02306        176 IGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVISLHPVLDKTTYHLIN  255 (386)
T ss_pred             HHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEEEEeCCCChhhhhhcC
Confidence            5889999985 779999999988642 12111 111            12245899999999999999999998888874


Q ss_pred             CCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc
Q psy755           66 GSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK  101 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~  101 (183)
                        .+....+++|.++|+++.+.-.+..++.+.++..
T Consensus       256 --~~~l~~MK~ga~lIN~aRG~lVDe~AL~~AL~sg  289 (386)
T PLN02306        256 --KERLALMKKEAVLVNASRGPVIDEVALVEHLKAN  289 (386)
T ss_pred             --HHHHHhCCCCeEEEECCCccccCHHHHHHHHHhC
Confidence              6778899999999999999988988999888765

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=98.44  E-value=1.1e-06  Score=70.12  Aligned_cols=94  Identities=19%  Similarity=0.247  Sum_probs=74.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHH----HHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQD----VLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~----~~~v~~~~~~l~~~l~~   76 (183)
                      ||+.+|+.|...|++|.+||+.....    ... ....++++++++||+|++++|....    ...++  .++....+++
T Consensus       127 IG~~vA~~l~a~G~~V~~~dp~~~~~----~~~-~~~~~L~ell~~sDiI~lh~PLt~~g~~~T~~li--~~~~l~~mk~  199 (378)
T PRK15438        127 VGRRLQARLEALGIKTLLCDPPRADR----GDE-GDFRSLDELVQEADILTFHTPLFKDGPYKTLHLA--DEKLIRSLKP  199 (378)
T ss_pred             HHHHHHHHHHHCCCEEEEECCccccc----ccc-cccCCHHHHHhhCCEEEEeCCCCCCccccccccc--CHHHHhcCCC
Confidence            68999999999999999999754211    111 1345899999999999999997653    55554  2566788999


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhc
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREK  101 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~  101 (183)
                      |.++||++.+...+..++.+.++..
T Consensus       200 gailIN~aRG~vVDe~AL~~aL~~g  224 (378)
T PRK15438        200 GAILINACRGAVVDNTALLTCLNEG  224 (378)
T ss_pred             CcEEEECCCchhcCHHHHHHHHHhC
Confidence            9999999999999999999888765

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.44  E-value=7.3e-07  Score=68.70  Aligned_cols=63  Identities=24%  Similarity=0.366  Sum_probs=52.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEc-CCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYD-KNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||..||..|.+.|++|++|+ |++               ++.+.+++||+||.+++.+..++..         ++++|.+
T Consensus       170 mG~PmA~~L~~~g~tVtv~~~rT~---------------~l~e~~~~ADIVIsavg~~~~v~~~---------~lk~Gav  225 (296)
T PRK14188        170 VGKPMAQLLLAANATVTIAHSRTR---------------DLPAVCRRADILVAAVGRPEMVKGD---------WIKPGAT  225 (296)
T ss_pred             hHHHHHHHHHhCCCEEEEECCCCC---------------CHHHHHhcCCEEEEecCChhhcchh---------eecCCCE
Confidence            79999999999999999994 765               4678889999999999997654443         3789999


Q ss_pred             EEeccCCC
Q psy755           80 VIDSSTVD   87 (183)
Q Consensus        80 iid~s~~~   87 (183)
                      |||++...
T Consensus       226 VIDvGin~  233 (296)
T PRK14188        226 VIDVGINR  233 (296)
T ss_pred             EEEcCCcc
Confidence            99998644

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=98.40  E-value=4.6e-06  Score=65.01  Aligned_cols=161  Identities=19%  Similarity=0.199  Sum_probs=109.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc------------cCCHHHHhccCCEEEEecCChHHHHHHhcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM------------ALSLSTLASGAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~------------~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      ||+-++..|.++|++|+++.|++. ++++.+.|...            .....+....+|+||++++.. +++.++   +
T Consensus        11 vG~l~g~~L~~~g~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa~-q~~~al---~   85 (307)
T COG1893          11 IGSLLGARLAKAGHDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKAY-QLEEAL---P   85 (307)
T ss_pred             HHHHHHHHHHhCCCeEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEeccc-cHHHHH---H
Confidence            688999999999988999999887 77877765221            122234455899999999875 467777   8


Q ss_pred             cccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccCCH---HHHhcCceEEEe--cCCHHHHHHHHHH
Q psy755           69 GILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSGGT---KAAQEATLTFMV--GGDKSSLEKAKPI  139 (183)
Q Consensus        69 ~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~---~~~~~~~~~~~~--~g~~~~~~~~~~l  139 (183)
                      .+.+.+++.+.|+-.-+...... .+.+..++.    |+.++.+. ..++   .....|...+-.  ++.++..+.+.++
T Consensus        86 ~l~~~~~~~t~vl~lqNG~g~~e-~l~~~~~~~~il~G~~~~~a~-~~~~g~v~~~g~g~~~ig~~~~~~~~~~~~i~~~  163 (307)
T COG1893          86 SLAPLLGPNTVVLFLQNGLGHEE-ELRKILPKETVLGGVTTHGAV-REGPGHVVHTGLGDTVIGELRGGRDELVKALAEL  163 (307)
T ss_pred             HhhhcCCCCcEEEEEeCCCcHHH-HHHHhCCcceEEEEEeeeeeE-ecCCceEEEecCCcEEEccCCCCchHHHHHHHHH
Confidence            99999999998887777766654 455544443    11122211 1111   111123433321  2344677888888


Q ss_pred             HHHhcCCeEEeCCcchHHHHHHHHHHHHH
Q psy755          140 LKCMGRNIVHCGDSGNGQVAKLCNNMLLG  168 (183)
Q Consensus       140 ~~~~g~~~~~~g~~g~a~~~k~~~~~~~~  168 (183)
                      |+..|.+..+..+.-...+-|++-|.-..
T Consensus       164 ~~~a~~~~~~~~di~~~~w~Kl~~N~~in  192 (307)
T COG1893         164 FKEAGLEVELHPDILAAIWRKLVVNAAIN  192 (307)
T ss_pred             HHhCCCCeEEcHHHHHHHHHHHHhhhccc
Confidence            99999988888888889999998887665

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=98.39  E-value=2.9e-06  Score=65.04  Aligned_cols=98  Identities=19%  Similarity=0.158  Sum_probs=72.1

Q ss_pred             CcHHHHHHHHhC--CCcEE-EEcCCchhHHHHHHc-CC-cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKN--GHDVI-VYDKNTDASQTLAKE-GA-NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~-~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||..+++.|.+.  ++++. +|||++++.+.+.+. +. ...+++++++.++|+|++|+|.... ..+.      ...+.
T Consensus        17 IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eell~~~D~Vvi~tp~~~h-~e~~------~~aL~   89 (271)
T PRK13302         17 IGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQLATHADIVVEAAPASVL-RAIV------EPVLA   89 (271)
T ss_pred             HHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHHhcCCCEEEECCCcHHH-HHHH------HHHHH
Confidence            578889888863  67776 789999988776654 53 4567899999999999999998654 3332      34466


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcE
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      .|+.++..+.......+++.+..++.|.++
T Consensus        90 aGk~Vi~~s~gal~~~~~L~~~A~~~g~~l  119 (271)
T PRK13302         90 AGKKAIVLSVGALLRNEDLIDLARQNGGQI  119 (271)
T ss_pred             cCCcEEEecchhHHhHHHHHHHHHHcCCEE
Confidence            788777666555556677888888888764

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=98.38  E-value=2.4e-06  Score=66.57  Aligned_cols=160  Identities=14%  Similarity=0.032  Sum_probs=100.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCccc-----------CCHHHHhccCCEEEEecCChHHHHHHhcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMA-----------LSLSTLASGAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~-----------~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      ||+-+|..|.+.|++|++++|+.++++.+.+. |....           ....+.....|+||+|++. .++..++   +
T Consensus        13 iG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl~i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK~-~~~~~al---~   88 (305)
T PRK05708         13 LGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGLTLVEQGQASLYAIPAETADAAEPIHRLLLACKA-YDAEPAV---A   88 (305)
T ss_pred             HHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCeEEeeCCcceeeccCCCCcccccccCEEEEECCH-HhHHHHH---H
Confidence            68899999999999999999998888877654 32111           0011123468999999977 4567776   8


Q ss_pred             cccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccC-C-HHHHhcCceEEEec-CCHHHHHHHHHHHH
Q psy755           69 GILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSG-G-TKAAQEATLTFMVG-GDKSSLEKAKPILK  141 (183)
Q Consensus        69 ~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~-~-~~~~~~~~~~~~~~-g~~~~~~~~~~l~~  141 (183)
                      .+.+.+.+++.|+-+-|+..... .+.+.+...    |..++.+...+ + ......+.  +..+ .+.+..+.+.++|.
T Consensus        89 ~l~~~l~~~t~vv~lQNGv~~~e-~l~~~~~~~~v~~g~~~~ga~~~~pg~v~~~~~g~--~~~G~~~~~~~~~l~~~l~  165 (305)
T PRK05708         89 SLAHRLAPGAELLLLQNGLGSQD-AVAARVPHARCIFASSTEGAFRDGDWRVVFAGHGF--TWLGDPRNPTAPAWLDDLR  165 (305)
T ss_pred             HHHhhCCCCCEEEEEeCCCCCHH-HHHHhCCCCcEEEEEeeeceecCCCCEEEEeceEE--EEEcCCCCcchHHHHHHHH
Confidence            88999999998888877765432 333333321    11122211111 1 11111122  2233 22344567778888


Q ss_pred             HhcCCeEEeCCcchHHHHHHHHHHHH
Q psy755          142 CMGRNIVHCGDSGNGQVAKLCNNMLL  167 (183)
Q Consensus       142 ~~g~~~~~~g~~g~a~~~k~~~~~~~  167 (183)
                      ..|....+..+.-...+-|++.|...
T Consensus       166 ~ag~~~~~~~di~~~~W~Kl~~N~~~  191 (305)
T PRK05708        166 EAGIPHEWTVDILTRLWRKLALNCAI  191 (305)
T ss_pred             hcCCCCccCHHHHHHHHHHHHHHccc
Confidence            88877776777888889999988743

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=98.37  E-value=1.3e-06  Score=66.95  Aligned_cols=101  Identities=21%  Similarity=0.251  Sum_probs=71.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----CCcccCCHHHH-hccCCEEEEecCChHH--HHHHhcCCcccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE----GANMALSLSTL-ASGAEFIISMLPASQD--VLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~~~~~~~~~-~~~adiVi~~vp~~~~--~~~v~~~~~~l~~~   73 (183)
                      ||++++..|++.|++|++++|++++.+.+.+.    +.....+..+. ..++|+||.++|.+..  .....    -....
T Consensus       128 ~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~gm~~~~~~~~----~~~~~  203 (270)
T TIGR00507       128 AARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAGMSGNIDEPP----VPAEK  203 (270)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhcccCccEEEECCCCCCCCCCCCCC----CCHHH
Confidence            58899999999999999999999887766543    22122233332 3579999999997531  11110    01235


Q ss_pred             CCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           74 AKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        74 l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++++.+++|++...+.+  .+.+..+++|.++++
T Consensus       204 l~~~~~v~D~~y~p~~T--~ll~~A~~~G~~~vd  235 (270)
T TIGR00507       204 LKEGMVVYDMVYNPGET--PFLAEAKSLGTKTID  235 (270)
T ss_pred             cCCCCEEEEeccCCCCC--HHHHHHHHCCCeeeC
Confidence            77899999999877766  477778888988887

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=98.34  E-value=3.3e-06  Score=61.87  Aligned_cols=99  Identities=17%  Similarity=0.199  Sum_probs=71.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||..+|+.|.+.|++|+++|+++++.+.+.+. +....+. .++. .+||+++.|.....-...       ..+.+ +.+
T Consensus        39 vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~-~~l~~~~~Dv~vp~A~~~~I~~~-------~~~~l-~~~  109 (200)
T cd01075          39 VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAP-EEIYSVDADVFAPCALGGVINDD-------TIPQL-KAK  109 (200)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcc-hhhccccCCEEEecccccccCHH-------HHHHc-CCC
Confidence            68999999999999999999999988887665 6554433 4444 479999977654322222       23344 467


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      +|++..+....+ ....+.+.++|+.|++.-
T Consensus       110 ~v~~~AN~~~~~-~~~~~~L~~~Gi~~~Pd~  139 (200)
T cd01075         110 AIAGAANNQLAD-PRHGQMLHERGILYAPDY  139 (200)
T ss_pred             EEEECCcCccCC-HhHHHHHHHCCCEEeCce
Confidence            888888765543 567778889999998843

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06141 ornithine cyclodeaminase; Validated

Probab=98.32  E-value=1.1e-06  Score=68.77  Aligned_cols=98  Identities=18%  Similarity=0.198  Sum_probs=69.2

Q ss_pred             CcHHHHHHHHh--CCCcEEEEcCCchhHHHHHHc----C--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLK--NGHDVIVYDKNTDASQTLAKE----G--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~--~g~~V~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||..++..+..  ...+|++|+|++++.+.+.+.    +  +...+++++++++||+|+.++|.+.   .++   .  .+
T Consensus       136 ~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~---pvl---~--~~  207 (314)
T PRK06141        136 LASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTE---PLV---R--GE  207 (314)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCC---CEe---c--HH
Confidence            56777765543  346899999999998887664    4  4456788889999999999998753   333   1  24


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+++|+ +|++.+..+...+++...+.+++..|+|
T Consensus       208 ~l~~g~-~i~~ig~~~~~~~El~~~~~~~a~~~vD  241 (314)
T PRK06141        208 WLKPGT-HLDLVGNFTPDMRECDDEAIRRASVYVD  241 (314)
T ss_pred             HcCCCC-EEEeeCCCCcccccCCHHHHhcCcEEEc
Confidence            677888 5666666665666666666666666777

>TIGR01723 hmd_TIGR 5,10-methenyltetrahydromethanopterin hydrogenase

Probab=98.27  E-value=1.6e-05  Score=59.90  Aligned_cols=111  Identities=14%  Similarity=0.156  Sum_probs=85.6

Q ss_pred             CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCc---EEeec
Q psy755           33 GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQIT---FLDAP  109 (183)
Q Consensus        33 g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~---~~~~~  109 (183)
                      |+..+++-.|+++++|++|+=+|.+.....++   +.+.+++++|.+|.+.++.+|...-.+.+.+.++.+.   |..+.
T Consensus       126 GvkVtsDD~EAv~~aei~I~ftPfG~~q~~Ii---kkii~~lpEgAII~~tCTIpt~~ly~ilE~l~R~DvgVsS~HPaa  202 (340)
T TIGR01723       126 GLKVTTDDREAVEDADIIITWLPKGNKQPDII---KKFIDDIPEGAIVTHACTIPTTKFAKIFEDLGREDLNVTSYHPGC  202 (340)
T ss_pred             CceEecCcHHHhcCCCEEEEEcCCCCCchHHH---HHHHhhCCCCCEEeccccCChHHHHHHHHhhCcccCCeeccCCCC
Confidence            57778888889999999999999988777777   8999999999999999999998877777776655433   33334


Q ss_pred             ccCCHHHHhcCceEEEec-CCHHHHHHHHHHHHHhcCCeEEeC
Q psy755          110 VSGGTKAAQEATLTFMVG-GDKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      +.+.+     +...+..+ .++++.+++.+|.++.++.++.+-
T Consensus       203 VPgt~-----~q~Yi~egyAtEEqI~klveL~~sa~k~ay~~P  240 (340)
T TIGR01723       203 VPEMK-----GQVYIAEGYASEEAVNKLYELGKKARGKAFKMP  240 (340)
T ss_pred             CCCCC-----CceEeecccCCHHHHHHHHHHHHHhCCCeeecc
Confidence            55443     22233322 588999999999999998877654

This model represents a clade of authenticated coenzyme N(5),N(10)-methenyltetrahydromethanopterin reductases. This enzyme does not use F420. This enzyme acts in methanogenesis and as such is restricted to methanogenic archaeal species. This clade is one of two clades in pfam model pfam03201.

>KOG2666|consensus

Probab=98.24  E-value=6e-05  Score=58.07  Aligned_cols=168  Identities=15%  Similarity=0.221  Sum_probs=110.9

Q ss_pred             cEEEEcCCchhHHHHHHc-------------------CCcccCCHHHHhccCCEEEEecCChHHH-----------HHHh
Q psy755           15 DVIVYDKNTDASQTLAKE-------------------GANMALSLSTLASGAEFIISMLPASQDV-----------LDAY   64 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~adiVi~~vp~~~~~-----------~~v~   64 (183)
                      +|++.|.|..++..+...                   +.-+.++.+..++.+|+||+.|..|.-+           +.+-
T Consensus        28 ~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~crgknlffstdiekai~eadlvfisvntptkt~g~gkg~aadlky~e  107 (481)
T KOG2666|consen   28 EVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCRGKNLFFSTDIEKAIKEADLVFISVNTPTKTYGLGKGKAADLKYWE  107 (481)
T ss_pred             EEEEEecCchHhhcccCCCCcccCCCHHHHHHHhcCCceeeecchHHHhhhcceEEEEecCCcccccCCCCcccchhHHH
Confidence            788889998876554331                   2345678888899999999999655322           1110


Q ss_pred             cCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh--cCCcE--Eeeccc--CCHHHHh--cCceEEEecCCH-----H
Q psy755           65 DGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE--KQITF--LDAPVS--GGTKAAQ--EATLTFMVGGDK-----S  131 (183)
Q Consensus        65 ~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~--~g~~~--~~~~~~--~~~~~~~--~~~~~~~~~g~~-----~  131 (183)
                      ...+.+.+.-...++++.-|++.....+.+...+..  .|++|  ++.|-+  .|..-..  .+. -+++||.+     +
T Consensus       108 s~ar~ia~~s~~~kivvekstvpv~aaesi~~il~~n~~~i~fqilsnpeflaegtaikdl~npd-rvligg~etpeg~~  186 (481)
T KOG2666|consen  108 SAARMIADVSVSDKIVVEKSTVPVKAAESIEKILNHNSKGIKFQILSNPEFLAEGTAIKDLFNPD-RVLIGGRETPEGFQ  186 (481)
T ss_pred             HHHHHHHHhccCCeEEEeeccccchHHHHHHHHHhcCCCCceeEeccChHHhcccchhhhhcCCc-eEEECCCCChhHHH
Confidence            001445566667899999999998888888888753  25543  333322  1211111  122 24555532     4


Q ss_pred             HHHHHHHHHHHhcC-CeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          132 SLEKAKPILKCMGR-NIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       132 ~~~~~~~l~~~~g~-~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++.+..+++.+-. .-+...+.=+++.-|++-|.+.+-.++.++-+.++|+.
T Consensus       187 av~~l~~vyehwvp~~~iittntwsselsklaanaflaqrissins~salcea  239 (481)
T KOG2666|consen  187 AVQALKDVYEHWVPREQIITTNTWSSELSKLAANAFLAQRISSINSMSALCEA  239 (481)
T ss_pred             HHHHHHHHHHhhCcccceeeccccHHHHHHHHHHHHHHHHHhhhHHHHHHHHh
Confidence            55666667776543 34556678899999999999999999999999999873

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.19  E-value=1.4e-05  Score=63.80  Aligned_cols=107  Identities=23%  Similarity=0.274  Sum_probs=82.7

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHHcC----------CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKEG----------ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~g----------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      +|+.+|..|++.| ++|++-|||.++++++....          +...+.+.+++++.|+||.+.|..... .++     
T Consensus        12 Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~~-~i~-----   85 (389)
T COG1748          12 VGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVDL-TIL-----   85 (389)
T ss_pred             hHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhhH-HHH-----
Confidence            4889999999999 89999999999999887652          122234567888999999999987765 332     


Q ss_pred             ccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHH
Q psy755           70 ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTK  115 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~  115 (183)
                       ...+..|..++|+|...+.. ..+.+.+.+.|+..+. +.+..|..
T Consensus        86 -ka~i~~gv~yvDts~~~~~~-~~~~~~a~~Agit~v~~~G~dPGi~  130 (389)
T COG1748          86 -KACIKTGVDYVDTSYYEEPP-WKLDEEAKKAGITAVLGCGFDPGIT  130 (389)
T ss_pred             -HHHHHhCCCEEEcccCCchh-hhhhHHHHHcCeEEEcccCcCcchH
Confidence             56778899999999888776 7788888888876554 56666543

>KOG2711|consensus

Probab=98.16  E-value=3.4e-05  Score=59.81  Aligned_cols=175  Identities=16%  Similarity=0.159  Sum_probs=110.7

Q ss_pred             CcHHHHHHHHhC--CC-----cEEEEcCCch------hHHHHHH---------------cCCcccCCHHHHhccCCEEEE
Q psy755            1 MGSHMARNLLKN--GH-----DVIVYDKNTD------ASQTLAK---------------EGANMALSLSTLASGAEFIIS   52 (183)
Q Consensus         1 mG~~iA~~l~~~--g~-----~V~~~~~~~~------~~~~~~~---------------~g~~~~~~~~~~~~~adiVi~   52 (183)
                      ||++||+.+.++  ++     +|..|-+..+      ++.....               .++...+++.+++.++|+++.
T Consensus        32 WGsaiaki~~~n~~~~~~f~~~Vrmwv~ee~i~~~~~~L~eiIN~~heN~KYlpg~~lP~NvvAv~dl~ea~~dADilvf  111 (372)
T KOG2711|consen   32 WGSAIAKIVGENVKEFPIFDPQVRMWVFEEEINGEAEKLTEIINSRHENVKYLPGIKLPENVVAVPDLVEAAKDADILVF  111 (372)
T ss_pred             HHHHHHHHHhhhhhhccccCceeeEEEeccccCChhHHHHHHhccccccccccCCccCCCCeEecchHHHHhccCCEEEE
Confidence            688888887654  12     5777744332      2222211               124567789999999999999


Q ss_pred             ecCChHHHHHHhcCCccccccCCCCcEEEeccCCCch-----hHHHHHHHHHhc-CC--cEEeecccCCHHHHhc-CceE
Q psy755           53 MLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQ-----VPQTLSNLAREK-QI--TFLDAPVSGGTKAAQE-ATLT  123 (183)
Q Consensus        53 ~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~-----~~~~~~~~~~~~-g~--~~~~~~~~~~~~~~~~-~~~~  123 (183)
                      .+|. |.+..++   +++..+++++..-|.++.....     ...-+.+.+.+. |+  .++..|-......... -..+
T Consensus       112 ~vPh-Qf~~~ic---~~l~g~vk~~~~aISL~KG~e~~~~g~~i~liS~iI~~~lgI~~~vL~GaNiA~EVa~~~f~e~t  187 (372)
T KOG2711|consen  112 VVPH-QFIPRIC---EQLKGYVKPGATAISLIKGVEVGEEGPGIRLISQIIHRALGIPCSVLMGANIASEVANEKFCETT  187 (372)
T ss_pred             eCCh-hhHHHHH---HHHhcccCCCCeEEEeecceeccCCCCceeehHHHHHHHhCCCceeecCCchHHHHHhcccccee
Confidence            9987 7889898   9999999999998887754221     123333444333 32  2333333332222222 2222


Q ss_pred             EEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy755          124 FMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG  181 (183)
Q Consensus       124 ~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~  181 (183)
                      +-+..+.+.-..+..+|+.--.+++...+...-+.+-.+.|....+  +++++++.++
T Consensus       188 Ig~~~~~~~~~~l~~lf~~p~FrV~~~~D~~~VEi~GaLKNVvAia--aGfvdGL~~g  243 (372)
T KOG2711|consen  188 IGYKDKKEAGILLKKLFRTPYFRVVVVEDADGVEICGALKNVVAIA--AGFVDGLGLG  243 (372)
T ss_pred             EeccchhhcchHHHHHhCCCceEEEEeccchHhHHhhhHHhHHHHh--hhhhhhccCC
Confidence            3222333433458888888888888888877788888888887766  7777777665

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=98.13  E-value=2.1e-05  Score=60.17  Aligned_cols=97  Identities=24%  Similarity=0.364  Sum_probs=67.8

Q ss_pred             CcHHHHHHHHhC--CCc-EEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKN--GHD-VIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~-V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||..+++.|.+.  +++ +.+||+++++.+.+.+. +...+++.++++.++|+|++|+|... .....   .   ..+..
T Consensus        12 iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~~~~~~ell~~~DvVvi~a~~~~-~~~~~---~---~al~~   84 (265)
T PRK13304         12 IASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKACLSIDELVEDVDLVVECASVNA-VEEVV---P---KSLEN   84 (265)
T ss_pred             HHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCeeECCHHHHhcCCCEEEEcCChHH-HHHHH---H---HHHHc
Confidence            688899988876  355 45689999988877654 55667788998899999999998644 44443   2   34456


Q ss_pred             CcEEEeccCC---CchhHHHHHHHHHhcCCc
Q psy755           77 GVIVIDSSTV---DPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        77 ~~iiid~s~~---~~~~~~~~~~~~~~~g~~  104 (183)
                      |+.++..|..   .+...+.+.+..++.|..
T Consensus        85 Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~  115 (265)
T PRK13304         85 GKDVIIMSVGALADKELFLKLYKLAKENNCK  115 (265)
T ss_pred             CCCEEEEchHHhcCHHHHHHHHHHHHHcCCE
Confidence            6666665542   344556777777777754

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=98.06  E-value=6.8e-06  Score=57.26  Aligned_cols=92  Identities=17%  Similarity=0.251  Sum_probs=66.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccC--------------CHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMAL--------------SLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~--------------~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||.-+|..|.+.|++|.+++|++ ..+.+.+.|.....              +..+....+|+||+|++.. +.+.++  
T Consensus         9 iG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~-~~~~~l--   84 (151)
T PF02558_consen    9 IGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY-QLEQAL--   84 (151)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG-GHHHHH--
T ss_pred             HHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEeccc-chHHHH--
Confidence            58899999999999999999999 78877776532211              1224567899999999874 466666  


Q ss_pred             CccccccCCCCcEEEeccCCCchhHHHHHHHH
Q psy755           67 SDGILKHAKPGVIVIDSSTVDPQVPQTLSNLA   98 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~   98 (183)
                       +.+.+.+.+++.|+-.-+..... +.+.+.+
T Consensus        85 -~~l~~~~~~~t~iv~~qNG~g~~-~~l~~~~  114 (151)
T PF02558_consen   85 -QSLKPYLDPNTTIVSLQNGMGNE-EVLAEYF  114 (151)
T ss_dssp             -HHHCTGEETTEEEEEESSSSSHH-HHHHCHS
T ss_pred             -HHHhhccCCCcEEEEEeCCCCcH-HHHHHHc
Confidence             78999999998888777765443 3344333

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.05  E-value=1.3e-05  Score=61.32  Aligned_cols=64  Identities=23%  Similarity=0.322  Sum_probs=52.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..||..|.+.|++|++|..              .+.++++.+++||+||.+++.+..++..         ++++|.++
T Consensus       170 vG~Pla~lL~~~gatVtv~~s--------------~t~~l~~~~~~ADIVI~avg~~~~v~~~---------~ik~GavV  226 (284)
T PRK14179        170 VGKPMAQLLLDKNATVTLTHS--------------RTRNLAEVARKADILVVAIGRGHFVTKE---------FVKEGAVV  226 (284)
T ss_pred             CcHHHHHHHHHCCCEEEEECC--------------CCCCHHHHHhhCCEEEEecCccccCCHH---------HccCCcEE
Confidence            799999999999999999931              1226888899999999999997754443         47899999


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      ||++...
T Consensus       227 IDvgin~  233 (284)
T PRK14179        227 IDVGMNR  233 (284)
T ss_pred             EEeccee
Confidence            9998543

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.96  E-value=3e-05  Score=54.43  Aligned_cols=82  Identities=18%  Similarity=0.275  Sum_probs=58.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.+|+.|...|.+|.+++++|-+.-.+.-.|.... ++++++..+|++|.++.....+.      .+..+.++.|.++.
T Consensus        35 G~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~-~~~~a~~~adi~vtaTG~~~vi~------~e~~~~mkdgail~  107 (162)
T PF00670_consen   35 GKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM-TLEEALRDADIFVTATGNKDVIT------GEHFRQMKDGAILA  107 (162)
T ss_dssp             HHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE--HHHHTTT-SEEEE-SSSSSSB-------HHHHHHS-TTEEEE
T ss_pred             cHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec-CHHHHHhhCCEEEECCCCccccC------HHHHHHhcCCeEEe
Confidence            889999999999999999999987766666787655 78999999999999886533111      23346788999999


Q ss_pred             eccCCCchh
Q psy755           82 DSSTVDPQV   90 (183)
Q Consensus        82 d~s~~~~~~   90 (183)
                      +.+....+.
T Consensus       108 n~Gh~d~Ei  116 (162)
T PF00670_consen  108 NAGHFDVEI  116 (162)
T ss_dssp             ESSSSTTSB
T ss_pred             ccCcCceeE
Confidence            988765554

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR00936 ahcY adenosylhomocysteinase

Probab=97.95  E-value=0.0001  Score=59.40  Aligned_cols=92  Identities=20%  Similarity=0.198  Sum_probs=69.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|..+|+.+...|.+|+++|+++.+...+...|.... +++++++.+|+||.++.....+..      .....+++|.++
T Consensus       206 IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~-~leeal~~aDVVItaTG~~~vI~~------~~~~~mK~Gail  278 (406)
T TIGR00936       206 CGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM-TMEEAAKIGDIFITATGNKDVIRG------EHFENMKDGAIV  278 (406)
T ss_pred             HHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC-CHHHHHhcCCEEEECCCCHHHHHH------HHHhcCCCCcEE
Confidence            4889999999999999999999987666666675443 567888999999998865443322      245678899999


Q ss_pred             EeccCCCc-hhHHHHHHHHH
Q psy755           81 IDSSTVDP-QVPQTLSNLAR   99 (183)
Q Consensus        81 id~s~~~~-~~~~~~~~~~~   99 (183)
                      ++.+.... .+...+.+...
T Consensus       279 iN~G~~~~eId~~aL~~~~~  298 (406)
T TIGR00936       279 ANIGHFDVEIDVKALEELAV  298 (406)
T ss_pred             EEECCCCceeCHHHHHHHHh
Confidence            99998765 56666665443

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PF03720 UDPG_MGDP_dh_C: UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; InterPro: IPR014027 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.94  E-value=2.4e-05  Score=51.38  Aligned_cols=81  Identities=20%  Similarity=0.266  Sum_probs=57.5

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHH---HcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLA---KEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ..|++.|.+.|.+|.+||..-.......   ..+....+++.+.++++|.||++++.++- +.+-+  +++...+.++.+
T Consensus        20 ~~l~~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vvl~t~h~~f-~~l~~--~~~~~~~~~~~~   96 (106)
T PF03720_consen   20 LELIEELKERGAEVSVYDPYVDEEEIKELGKLEGVEVCDDLEEALKGADAVVLATDHDEF-RELDW--EEIAKLMRKPPV   96 (106)
T ss_dssp             HHHHHHHHHTT-EEEEE-TTSHHHHHHHHCHHHCEEEESSHHHHHTTESEEEESS--GGG-GCCGH--HHHHHHSCSSEE
T ss_pred             HHHHHHHHHCCCEEEEECCccChHHHHhhCCccceEEecCHHHHhcCCCEEEEEecCHHH-hccCH--HHHHHhcCCCCE
Confidence            4678899999999999997766544433   24677788999999999999999987553 33110  455666778999


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      |+|+-+.
T Consensus        97 iiD~~~~  103 (106)
T PF03720_consen   97 IIDGRNI  103 (106)
T ss_dssp             EEESSST
T ss_pred             EEECccc
Confidence            9998765

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the C-terminal substrate-binding domain of these enzymes. Structural studies indicate that this domain forms an incomplete dinucleotide binding fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3GG2_D 1DLI_A 1DLJ_A 2Y0E_D 2Y0D_B 2Y0C_D 1MV8_B 1MUU_A 1MFZ_C 3TDK_B ....

>KOG3124|consensus

Probab=97.89  E-value=0.00037  Score=52.15  Aligned_cols=137  Identities=11%  Similarity=0.192  Sum_probs=92.8

Q ss_pred             CcHHHHHHHHhCCC----cEEEEcCCchhHHH-HHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH----DVIVYDKNTDASQT-LAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~----~V~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      |..++++.+.+.|.    +++.+..+...... +.+.|.....+..+..+.+|++++++.+ +.+..++   .++.+.+.
T Consensus        11 ma~ala~g~~~~Gi~~~~~i~~s~~~~~~~~~~~~~~g~~~~~~n~~~~~~s~v~~~svKp-~~i~~vl---s~~~~~~~   86 (267)
T KOG3124|consen   11 MAQALASGFVASGIIEANRIWASVQTERSLGLMFEALGVKTVFTNLEVLQASDVVFLSVKP-QVIESVL---SEIKPKVS   86 (267)
T ss_pred             hHHHHHhcccccCCCchhheeeecCchhhhhhhhhcCCceeeechHHHHhhccceeEeecc-hhHHHHh---hcCccccc
Confidence            44567777777775    57777664444444 6777887777778889999999999965 8888887   77887788


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEec--CCHHHHHHHHHHHHHhcC
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVG--GDKSSLEKAKPILKCMGR  145 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~g~  145 (183)
                      .+++|+.+-......  .+.+.+. -..+++ .-|..+|....++..++..+  ...++.+.+++++...|.
T Consensus        87 ~~~iivS~aaG~tl~--~l~~~l~-~~~rvi-RvmpNtp~~v~eg~sv~~~g~~~~~~D~~l~~~ll~~vG~  154 (267)
T KOG3124|consen   87 KGKIIVSVAAGKTLS--SLESKLS-PPTRVI-RVMPNTPSVVGEGASVYAIGCHATNEDLELVEELLSAVGL  154 (267)
T ss_pred             cceEEEEEeecccHH--HHHHhcC-CCCceE-EecCCChhhhhcCcEEEeeCCCcchhhHHHHHHHHHhcCc
Confidence            999998766554443  3344433 112222 23556677777776544333  244666889999999996

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=97.86  E-value=3.9e-05  Score=60.38  Aligned_cols=72  Identities=13%  Similarity=0.194  Sum_probs=54.6

Q ss_pred             hCCCcEEEEcCCchhHHHHHHc----C--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEecc
Q psy755           11 KNGHDVIVYDKNTDASQTLAKE----G--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSS   84 (183)
Q Consensus        11 ~~g~~V~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s   84 (183)
                      ....+|++|||++++.+.+.+.    +  +..+++.++++++||+|+.|+|...+   ++   .  .+++++|.+|...+
T Consensus       151 ~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P---~~---~--~~~l~~g~~v~~vG  222 (325)
T TIGR02371       151 FDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKP---VV---K--ADWVSEGTHINAIG  222 (325)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCc---Ee---c--HHHcCCCCEEEecC
Confidence            3345899999999998776542    4  34578999999999999999988543   22   1  34678999998888


Q ss_pred             CCCchh
Q psy755           85 TVDPQV   90 (183)
Q Consensus        85 ~~~~~~   90 (183)
                      +..|..
T Consensus       223 s~~p~~  228 (325)
T TIGR02371       223 ADAPGK  228 (325)
T ss_pred             CCCccc
Confidence            877754

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.85  E-value=7.3e-06  Score=56.25  Aligned_cols=80  Identities=21%  Similarity=0.286  Sum_probs=55.3

Q ss_pred             CcHHHHHHHHhCCCc-EEEEcCCchhHHHHHHcC------CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLLKNGHD-VIVYDKNTDASQTLAKEG------ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~~g~~-V~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||++++..|.+.|.+ |++++|+.++++.+.+.-      ....+++.+.+.++|+||.|+|.+..   .+  .++..+.
T Consensus        23 ~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~~---~i--~~~~~~~   97 (135)
T PF01488_consen   23 AARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGMP---II--TEEMLKK   97 (135)
T ss_dssp             HHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTST---SS--THHHHTT
T ss_pred             HHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCCc---cc--CHHHHHH
Confidence            578999999999996 999999999988887651      22355667778899999999998754   11  0222222


Q ss_pred             CCCC-cEEEeccC
Q psy755           74 AKPG-VIVIDSST   85 (183)
Q Consensus        74 l~~~-~iiid~s~   85 (183)
                      ..+. ++++|.+.
T Consensus        98 ~~~~~~~v~Dla~  110 (135)
T PF01488_consen   98 ASKKLRLVIDLAV  110 (135)
T ss_dssp             TCHHCSEEEES-S
T ss_pred             HHhhhhceecccc
Confidence            2121 48999973

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.81  E-value=7.9e-05  Score=60.92  Aligned_cols=80  Identities=20%  Similarity=0.244  Sum_probs=62.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|+++++++.+...+...|... .+++++++.+|+|++++..    +.++  ..+..+.+++|.++
T Consensus       265 IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~-~~leell~~ADIVI~atGt----~~iI--~~e~~~~MKpGAiL  337 (476)
T PTZ00075        265 VGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQV-VTLEDVVETADIFVTATGN----KDII--TLEHMRRMKNNAIV  337 (476)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCcee-ccHHHHHhcCCEEEECCCc----cccc--CHHHHhccCCCcEE
Confidence            589999999999999999999988765555556543 3788899999999999753    2333  13456778999999


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      +|.+...
T Consensus       338 INvGr~d  344 (476)
T PTZ00075        338 GNIGHFD  344 (476)
T ss_pred             EEcCCCc
Confidence            9998874

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.81  E-value=4.6e-05  Score=59.62  Aligned_cols=81  Identities=23%  Similarity=0.352  Sum_probs=56.7

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHHc-CCcc--cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC-C
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKE-GANM--ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA-K   75 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~-g~~~--~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l-~   75 (183)
                      ||..+++.|...| .+|++++|++++.+.+.+. |...  .++..+.+..+|+||.++|.+.. ..++   ....+.. .
T Consensus       189 iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVi~at~~~~~-~~~~---~~~~~~~~~  264 (311)
T cd05213         189 MGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADVVISATGAPHY-AKIV---ERAMKKRSG  264 (311)
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCEEEECCCCCch-HHHH---HHHHhhCCC
Confidence            6888889888866 5899999999987666554 4422  23456778899999999998765 3322   2222222 3


Q ss_pred             CCcEEEeccC
Q psy755           76 PGVIVIDSST   85 (183)
Q Consensus        76 ~~~iiid~s~   85 (183)
                      ++.+++|.+.
T Consensus       265 ~~~~viDlav  274 (311)
T cd05213         265 KPRLIVDLAV  274 (311)
T ss_pred             CCeEEEEeCC
Confidence            6789999994

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07340 ornithine cyclodeaminase; Validated

Probab=97.81  E-value=0.00012  Score=57.14  Aligned_cols=97  Identities=11%  Similarity=0.248  Sum_probs=67.0

Q ss_pred             CcHHHHHHHHh-CCC-cEEEEcCCchhHHHHHHc----CCcc-cCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLLK-NGH-DVIVYDKNTDASQTLAKE----GANM-ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~-~g~-~V~~~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||...+..+.. .+. +|.+|+|++++.+++.+.    +... .++.++++.++|+|+.|+|.+.+   ++   +   ..
T Consensus       136 qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~P---l~---~---~~  206 (304)
T PRK07340        136 QARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRTP---VY---P---EA  206 (304)
T ss_pred             HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCCc---ee---C---cc
Confidence            35666777654 454 799999999988877654    2222 46788899999999999998653   33   2   24


Q ss_pred             CCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           74 AKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        74 l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +++|++|+..++..|..-+--.+.+... .-|+|
T Consensus       207 ~~~g~hi~~iGs~~p~~~El~~~~~~~a-~v~vD  239 (304)
T PRK07340        207 ARAGRLVVAVGAFTPDMAELAPRTVRGS-RLYVD  239 (304)
T ss_pred             CCCCCEEEecCCCCCCcccCCHHHHhhC-eEEEc
Confidence            7899999999988876544333444433 34556

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.80  E-value=0.0001  Score=60.92  Aligned_cols=92  Identities=21%  Similarity=0.358  Sum_probs=65.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcc--cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANM--ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~--~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||++++..|.+.|++|++++|++++.+.+.+. +...  ..+..+ +.++|+||.|+|.+..+...          +.  
T Consensus       343 iG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~~~~~~~~~-l~~~DiVInatP~g~~~~~~----------l~--  409 (477)
T PRK09310        343 AAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKAFPLESLPE-LHRIDIIINCLPPSVTIPKA----------FP--  409 (477)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccceechhHhcc-cCCCCEEEEcCCCCCcchhH----------Hh--
Confidence            58999999999999999999999888776554 2111  122222 46899999999987643221          11  


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+++|+....+.+.  +.+.++++|++.++
T Consensus       410 ~~v~D~~Y~P~~T~--ll~~A~~~G~~~~~  437 (477)
T PRK09310        410 PCVVDINTLPKHSP--YTQYARSQGSSIIY  437 (477)
T ss_pred             hhEEeccCCCCCCH--HHHHHHHCcCEEEC
Confidence            38899998776665  56777778888777

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=97.79  E-value=5.5e-05  Score=50.83  Aligned_cols=83  Identities=22%  Similarity=0.286  Sum_probs=50.4

Q ss_pred             cHHHHHHHHhC-CCcEEEE-cCCchhHHHHHHcC--C--c-c-cCCHHHH-hccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLKN-GHDVIVY-DKNTDASQTLAKEG--A--N-M-ALSLSTL-ASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~~-g~~V~~~-~~~~~~~~~~~~~g--~--~-~-~~~~~~~-~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |..++..|.+. ++++... +++.++.+.+...+  +  . . ..+..++ ..++|+||+|+|+....+.+    ..+.+
T Consensus        12 g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~----~~~~~   87 (122)
T smart00859       12 GQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSKEIA----PLLPK   87 (122)
T ss_pred             HHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHHHHHH----HHHHh
Confidence            55677777774 7777765 65544433433322  1  1 0 1111121 25899999999997655544    34455


Q ss_pred             cCCCCcEEEeccCCCc
Q psy755           73 HAKPGVIVIDSSTVDP   88 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~   88 (183)
                      .+.+|+++||+|+...
T Consensus        88 ~~~~g~~viD~s~~~~  103 (122)
T smart00859       88 AAEAGVKVIDLSSAFR  103 (122)
T ss_pred             hhcCCCEEEECCcccc
Confidence            6789999999998654

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.78  E-value=0.00018  Score=58.36  Aligned_cols=81  Identities=17%  Similarity=0.242  Sum_probs=63.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|..+...|.+|+++|+++.+...+...|... .++.++++.+|+||.++.....+.      ......+++|.++
T Consensus       223 IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v-~~l~eal~~aDVVI~aTG~~~vI~------~~~~~~mK~Gail  295 (425)
T PRK05476        223 VGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRV-MTMEEAAELGDIFVTATGNKDVIT------AEHMEAMKDGAIL  295 (425)
T ss_pred             HHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEe-cCHHHHHhCCCEEEECCCCHHHHH------HHHHhcCCCCCEE
Confidence            588999999999999999999998876666666553 367888999999999986543332      2345678899999


Q ss_pred             EeccCCCc
Q psy755           81 IDSSTVDP   88 (183)
Q Consensus        81 id~s~~~~   88 (183)
                      ++.+....
T Consensus       296 iNvG~~d~  303 (425)
T PRK05476        296 ANIGHFDN  303 (425)
T ss_pred             EEcCCCCC
Confidence            99887654

>PRK06823 ornithine cyclodeaminase; Validated

Probab=97.71  E-value=0.00012  Score=57.33  Aligned_cols=86  Identities=16%  Similarity=0.300  Sum_probs=60.3

Q ss_pred             CcEEEEcCCchhHHHHHHc----CC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           14 HDVIVYDKNTDASQTLAKE----GA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        14 ~~V~~~~~~~~~~~~~~~~----g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      -+|++|+|++++.+.+.+.    +.  ..+++.++++++||+|+.+++...+   ++   +  .+++++|.+|+..++..
T Consensus       154 ~~v~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIV~taT~s~~P---~~---~--~~~l~~G~hi~~iGs~~  225 (315)
T PRK06823        154 RQLWVWGRSETALEEYRQYAQALGFAVNTTLDAAEVAHAANLIVTTTPSREP---LL---Q--AEDIQPGTHITAVGADS  225 (315)
T ss_pred             CEEEEECCCHHHHHHHHHHHHhcCCcEEEECCHHHHhcCCCEEEEecCCCCc---ee---C--HHHcCCCcEEEecCCCC
Confidence            3899999999998776542    33  3467899999999999999987653   22   1  24678999999888887


Q ss_pred             chhHHHHHHHHHhcCCcEEe
Q psy755           88 PQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        88 ~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |...+--.+.+.+...-++|
T Consensus       226 p~~~Eld~~~l~~a~~vvvD  245 (315)
T PRK06823        226 PGKQELDAELVARADKILVD  245 (315)
T ss_pred             cccccCCHHHHhhCCEEEEC
Confidence            76543333444433334555

>PLN02494 adenosylhomocysteinase

Probab=97.70  E-value=0.00027  Score=57.77  Aligned_cols=90  Identities=17%  Similarity=0.198  Sum_probs=67.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|+++++++.+...+...|.... ++.++++.+|+||.+......+.      .+..+.+++|.++
T Consensus       265 IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv-~leEal~~ADVVI~tTGt~~vI~------~e~L~~MK~GAiL  337 (477)
T PLN02494        265 VGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL-TLEDVVSEADIFVTTTGNKDIIM------VDHMRKMKNNAIV  337 (477)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec-cHHHHHhhCCEEEECCCCccchH------HHHHhcCCCCCEE
Confidence            5899999999999999999999987666666665543 67888999999999776533221      3335678999999


Q ss_pred             EeccCC-CchhHHHHHHH
Q psy755           81 IDSSTV-DPQVPQTLSNL   97 (183)
Q Consensus        81 id~s~~-~~~~~~~~~~~   97 (183)
                      ++.+.. ...+..++.+.
T Consensus       338 iNvGr~~~eID~~aL~~~  355 (477)
T PLN02494        338 CNIGHFDNEIDMLGLETY  355 (477)
T ss_pred             EEcCCCCCccCHHHHhhc
Confidence            999984 45555555554

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=97.70  E-value=0.00012  Score=57.08  Aligned_cols=85  Identities=15%  Similarity=0.178  Sum_probs=60.3

Q ss_pred             cEEEEcCCchhHHHHHHc-----C--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           15 DVIVYDKNTDASQTLAKE-----G--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~~-----g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      +|.+|+|++++.+++.+.     |  +..++++++++.+||+|+.+++..++   ++.     ..++++|.+|.-.++..
T Consensus       144 ~v~v~~r~~~~a~~f~~~~~~~~~~~v~~~~~~~eav~~aDIV~taT~s~~P---~~~-----~~~l~pg~hV~aiGs~~  215 (301)
T PRK06407        144 RIRVYSRNFDHARAFAERFSKEFGVDIRPVDNAEAALRDADTITSITNSDTP---IFN-----RKYLGDEYHVNLAGSNY  215 (301)
T ss_pred             EEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCc---Eec-----HHHcCCCceEEecCCCC
Confidence            799999999998876543     3  34567899999999999999988653   221     24678899998888877


Q ss_pred             chhHHHHHHHHHhcCCcEEe
Q psy755           88 PQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        88 ~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |...+--.+.+.....-++|
T Consensus       216 p~~~El~~~~l~~a~~v~vD  235 (301)
T PRK06407        216 PNRREAEHSVLNDADIVVTE  235 (301)
T ss_pred             CCcccCCHHHHHhCCEEEEC
Confidence            76543333444443334555

>KOG0068|consensus

Probab=97.70  E-value=0.00022  Score=55.48  Aligned_cols=96  Identities=23%  Similarity=0.259  Sum_probs=79.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|.++...|..|+.||.-.. .+++.+.|++.. +++|+...||.|-+.+|-..++++++.  ++....+++|..|
T Consensus       157 IGseVA~r~k~~gm~vI~~dpi~~-~~~~~a~gvq~v-sl~Eil~~ADFitlH~PLtP~T~~lin--~~tfA~mKkGVri  232 (406)
T KOG0068|consen  157 IGSEVAVRAKAMGMHVIGYDPITP-MALAEAFGVQLV-SLEEILPKADFITLHVPLTPSTEKLLN--DETFAKMKKGVRI  232 (406)
T ss_pred             chHHHHHHHHhcCceEEeecCCCc-hHHHHhccceee-eHHHHHhhcCEEEEccCCCcchhhccC--HHHHHHhhCCcEE
Confidence            689999999999999999874332 245566687776 999999999999999999999999884  5667789999999


Q ss_pred             EeccCCCchhHHHHHHHHHh
Q psy755           81 IDSSTVDPQVPQTLSNLARE  100 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~  100 (183)
                      |+++.....+..++.+.+..
T Consensus       233 IN~aRGGvVDe~ALv~Al~s  252 (406)
T KOG0068|consen  233 INVARGGVVDEPALVRALDS  252 (406)
T ss_pred             EEecCCceechHHHHHHHhc
Confidence            99999988888888877664

>COG5495 Uncharacterized conserved protein [Function unknown]

Probab=97.69  E-value=0.0013  Score=48.59  Aligned_cols=140  Identities=16%  Similarity=0.151  Sum_probs=86.0

Q ss_pred             HHHH-HHhCCCcEEE----EcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            5 MARN-LLKNGHDVIV----YDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         5 iA~~-l~~~g~~V~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +++. |.+.-+.++-    ..||+++.+.+.+--+-...+.+...+-.++||..+|+. .+..+.     ......+|++
T Consensus        21 l~ra~~~ra~h~~~~cs~i~srS~~~a~~LaE~~~a~p~d~~~~ael~~~vfv~vpd~-~~s~va-----a~~~~rpg~i   94 (289)
T COG5495          21 LGRAALLRADHVVVACSAISSRSRDRAQNLAETYVAPPLDVAKSAELLLLVFVDVPDA-LYSGVA-----ATSLNRPGTI   94 (289)
T ss_pred             HHHHHHHHhcchheeehhhhhcCHHHHhhchhccCCCccchhhChhhhceEEecchHH-HHHHHH-----HhcccCCCeE
Confidence            3344 4555554433    257777777655442222334555556688999999885 333332     2345679999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEe-ec--cc-CCHHHHh--cCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCc
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLD-AP--VS-GGTKAAQ--EATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDS  153 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~-~~--~~-~~~~~~~--~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~  153 (183)
                      +++||........   ..+.+.|..... ||  ++ |.+....  .++.+.++.+++.-...++.+...+|.+++.+-+.
T Consensus        95 v~HcSga~~~~il---~~~gr~g~~~asiHP~f~Fsgl~edl~rl~d~~~~i~eaD~~g~ai~q~la~emgg~~f~V~~~  171 (289)
T COG5495          95 VAHCSGANGSGIL---APLGRQGCIPASIHPAFSFSGLDEDLSRLKDTIFGITEADDVGYAIVQSLALEMGGEPFCVREE  171 (289)
T ss_pred             EEEccCCCchhhh---hhhhhcCCcceeecccccccCCHHHHHhCcccEEEeecccccccHHHHHHHHHhCCCceeechh
Confidence            9999988776643   333444433222 33  33 3344333  35555566888888889999999999988776653

>COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism]

Probab=97.68  E-value=0.00019  Score=54.96  Aligned_cols=76  Identities=22%  Similarity=0.341  Sum_probs=61.5

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchh-HHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDA-SQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      |.+=|.+|...|.+|++--|...+ .+++.+.|.... +..|+++.+|+|++.+|+.+ -+.++.  +++.|.|++|+.+
T Consensus        30 G~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~-~v~ea~k~ADvim~L~PDe~-q~~vy~--~~I~p~Lk~G~aL  105 (338)
T COG0059          30 GHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVY-TVEEAAKRADVVMILLPDEQ-QKEVYE--KEIAPNLKEGAAL  105 (338)
T ss_pred             HHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEee-cHHHHhhcCCEEEEeCchhh-HHHHHH--HHhhhhhcCCceE
Confidence            567788999999999887666554 778888887755 99999999999999999955 456662  5899999999865


Q ss_pred             E
Q psy755           81 I   81 (183)
Q Consensus        81 i   81 (183)
                      .
T Consensus       106 ~  106 (338)
T COG0059         106 G  106 (338)
T ss_pred             E
Confidence            3

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=97.66  E-value=0.00029  Score=56.96  Aligned_cols=79  Identities=18%  Similarity=0.256  Sum_probs=62.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|..+++.+...|.+|+++|+++.+.+.+...|.... +.++.+..+|+||.++..+..+..      ...+.+++|.++
T Consensus       213 IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~~~e~v~~aDVVI~atG~~~~i~~------~~l~~mk~Ggil  285 (413)
T cd00401         213 VGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-TMEEAVKEGDIFVTTTGNKDIITG------EHFEQMKDGAIV  285 (413)
T ss_pred             HHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-cHHHHHcCCCEEEECCCCHHHHHH------HHHhcCCCCcEE
Confidence            5888999999999999999999999888888887443 567788899999999866443332      235678899999


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      ++.+..
T Consensus       286 vnvG~~  291 (413)
T cd00401         286 CNIGHF  291 (413)
T ss_pred             EEeCCC
Confidence            988854

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.66  E-value=0.00014  Score=55.97  Aligned_cols=103  Identities=20%  Similarity=0.233  Sum_probs=68.5

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHHc-C----CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKE-G----ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~-g----~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      +|++++..|...| .+|++++|+.++.+.+.+. +    +....+..+.+..+|+||.++|.+..-..-.  ..-....+
T Consensus       134 ~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivInaTp~g~~~~~~~--~~~~~~~l  211 (278)
T PRK00258        134 AARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDLELQEELADFDLIINATSAGMSGELPL--PPLPLSLL  211 (278)
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecccchhccccCCEEEECCcCCCCCCCCC--CCCCHHHc
Confidence            4788999999999 5899999999988777654 1    1111133456688999999998764210000  01112356


Q ss_pred             CCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           75 KPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        75 ~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +++.+++|..-....+  .+.+..+++|.+.++
T Consensus       212 ~~~~~v~DivY~P~~T--~ll~~A~~~G~~~~~  242 (278)
T PRK00258        212 RPGTIVYDMIYGPLPT--PFLAWAKAQGARTID  242 (278)
T ss_pred             CCCCEEEEeecCCCCC--HHHHHHHHCcCeecC
Confidence            7889999998744333  455666777877766

>COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism]

Probab=97.61  E-value=0.00015  Score=56.95  Aligned_cols=86  Identities=17%  Similarity=0.330  Sum_probs=64.8

Q ss_pred             CcEEEEcCCchhHHHHHHc----C---CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           14 HDVIVYDKNTDASQTLAKE----G---ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        14 ~~V~~~~~~~~~~~~~~~~----g---~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      -+|.+|+|++++.+++...    +   +...++.++++++||+|+.|+|..++   ++.     .+++++|.+|...++.
T Consensus       156 ~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~P---il~-----~~~l~~G~hI~aiGad  227 (330)
T COG2423         156 REIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTEP---VLK-----AEWLKPGTHINAIGAD  227 (330)
T ss_pred             cEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCCC---eec-----HhhcCCCcEEEecCCC
Confidence            3899999999998887643    3   45678899999999999999998763   331     4578899999988887


Q ss_pred             CchhHHHHHHHHHhcCCcEEe
Q psy755           87 DPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        87 ~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|...+--.+.+.+.+.-++|
T Consensus       228 ~p~k~Eld~e~l~ra~~vvvD  248 (330)
T COG2423         228 APGKRELDPEVLARADRVVVD  248 (330)
T ss_pred             CcccccCCHHHHHhcCeEEEc
Confidence            776655445555555566666

>PRK08618 ornithine cyclodeaminase; Validated

Probab=97.60  E-value=0.00026  Score=55.77  Aligned_cols=97  Identities=15%  Similarity=0.226  Sum_probs=65.1

Q ss_pred             cHHHHHHHHh-CCC-cEEEEcCCchhHHHHHHc-----CC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLK-NGH-DVIVYDKNTDASQTLAKE-----GA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~-~g~-~V~~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |+..+..+.. .+. +|.+|+|++++.+++.+.     ++  ...++.++++.++|+|+.|+|....   ++   .   .
T Consensus       139 a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p---~i---~---~  209 (325)
T PRK08618        139 AKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTP---VF---S---E  209 (325)
T ss_pred             HHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCc---ch---H---H
Confidence            4455555543 344 799999999998877652     33  3467888899999999999998642   32   2   5


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+++|++|+..++..|...+.-.+.+.+...-++|
T Consensus       210 ~l~~G~hV~~iGs~~p~~~E~~~~~~~~a~~vvvD  244 (325)
T PRK08618        210 KLKKGVHINAVGSFMPDMQELPSEAIARANKVVVE  244 (325)
T ss_pred             hcCCCcEEEecCCCCcccccCCHHHHhhCCEEEEC
Confidence            67899999988887775543333334333333555

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.58  E-value=0.00016  Score=52.66  Aligned_cols=84  Identities=20%  Similarity=0.325  Sum_probs=57.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-----CC--cc--c---CCHHHHhccCCEEEEecCChHHHHHHhcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-----GA--NM--A---LSLSTLASGAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-----g~--~~--~---~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      +|+.++..|++.|++|++++|+.++.+.+.+.     +.  ..  .   ++..+.++++|+||.++|.+.....      
T Consensus        40 iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~~g~~~~~------  113 (194)
T cd01078          40 VGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGAAGVELLE------  113 (194)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCCCCceech------
Confidence            47789999999999999999999887766542     11  11  1   2234677899999999988763111      


Q ss_pred             cccccCCCCcEEEeccCCCchh
Q psy755           69 GILKHAKPGVIVIDSSTVDPQV   90 (183)
Q Consensus        69 ~l~~~l~~~~iiid~s~~~~~~   90 (183)
                      .......++.+++|.....+..
T Consensus       114 ~~~~~~~~~~vv~D~~~~~~~~  135 (194)
T cd01078         114 KLAWAPKPLAVAADVNAVPPVG  135 (194)
T ss_pred             hhhcccCceeEEEEccCCCCCC
Confidence            1122344578999997665544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.57  E-value=0.00023  Score=54.94  Aligned_cols=101  Identities=22%  Similarity=0.265  Sum_probs=68.3

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-----C-C--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc-
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-----G-A--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI-   70 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-----g-~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l-   70 (183)
                      +|++++..|++.|. +|+++||+.++++.+.+.     . .  ...++..+.+.++|+||.|+|.+..-..-    .-+ 
T Consensus       138 aaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~----~~~~  213 (284)
T PRK12549        138 AGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTGMAKHPG----LPLP  213 (284)
T ss_pred             HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCCCCCCCC----CCCC
Confidence            37889999999998 799999999998877653     1 1  11234455678899999999875321000    011 


Q ss_pred             cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           71 LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ...++++.++.|..-....+  .+.+..+++|...++
T Consensus       214 ~~~l~~~~~v~DivY~P~~T--~ll~~A~~~G~~~~~  248 (284)
T PRK12549        214 AELLRPGLWVADIVYFPLET--ELLRAARALGCRTLD  248 (284)
T ss_pred             HHHcCCCcEEEEeeeCCCCC--HHHHHHHHCCCeEec
Confidence            13467788899998765544  455566777877766

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=97.55  E-value=0.00021  Score=56.30  Aligned_cols=80  Identities=16%  Similarity=0.246  Sum_probs=57.8

Q ss_pred             cHHHHHHHH-hCCC-cEEEEcCCchhHHHHHHc-----CC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLL-KNGH-DVIVYDKNTDASQTLAKE-----GA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~-~~g~-~V~~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |+..+..|. ..+. +|++|+|++++.+.+.+.     ++  ...+++++++.++|+|+.|+|...+   ++   .  .+
T Consensus       141 A~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p---~i---~--~~  212 (326)
T TIGR02992       141 ARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETP---IL---H--AE  212 (326)
T ss_pred             HHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCc---Ee---c--HH
Confidence            556667775 3554 699999999998877653     43  3357888899999999999988553   22   1  23


Q ss_pred             cCCCCcEEEeccCCCch
Q psy755           73 HAKPGVIVIDSSTVDPQ   89 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~   89 (183)
                      .+++|.+|...++..|.
T Consensus       213 ~l~~g~~i~~vg~~~p~  229 (326)
T TIGR02992       213 WLEPGQHVTAMGSDAEH  229 (326)
T ss_pred             HcCCCcEEEeeCCCCCC
Confidence            57889998887766554

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=97.54  E-value=0.00089  Score=44.54  Aligned_cols=97  Identities=23%  Similarity=0.361  Sum_probs=66.8

Q ss_pred             cHHHHHHHHhC--CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            2 GSHMARNLLKN--GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         2 G~~iA~~l~~~--g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      |+.....+.+.  +.+++ ++|+++++.+.+.+. +...+++.+++++  +.|+|++++|...+.+.+       ...+.
T Consensus        12 g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~I~tp~~~h~~~~-------~~~l~   84 (120)
T PF01408_consen   12 GRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIPVYTDLEELLADEDVDAVIIATPPSSHAEIA-------KKALE   84 (120)
T ss_dssp             HHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSEEESSHHHHHHHTTESEEEEESSGGGHHHHH-------HHHHH
T ss_pred             HHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhcccchhHHHHHHHhhcCCEEEEecCCcchHHHH-------HHHHH
Confidence            44455556655  44655 689999998886544 7778889999987  799999999997765555       34455


Q ss_pred             CCcEEE-ecc-CCCchhHHHHHHHHHhcCCcE
Q psy755           76 PGVIVI-DSS-TVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        76 ~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      .|+.|+ +-= .....+...+.+..++.|..+
T Consensus        85 ~g~~v~~EKP~~~~~~~~~~l~~~a~~~~~~~  116 (120)
T PF01408_consen   85 AGKHVLVEKPLALTLEEAEELVEAAKEKGVKV  116 (120)
T ss_dssp             TTSEEEEESSSSSSHHHHHHHHHHHHHHTSCE
T ss_pred             cCCEEEEEcCCcCCHHHHHHHHHHHHHhCCEE
Confidence            666554 321 235666777777777777553

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.47  E-value=0.00016  Score=57.91  Aligned_cols=87  Identities=20%  Similarity=0.314  Sum_probs=59.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCc---cc---CCHHHHhccCCEEEEecCChH-HHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GAN---MA---LSLSTLASGAEFIISMLPASQ-DVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~---~~---~~~~~~~~~adiVi~~vp~~~-~~~~v~~~~~~l~~   72 (183)
                      +|...++.+.+.|.+|+++||++++.+.+... +..   ..   .++.+.++++|+||.+++.+. ....++  .++...
T Consensus       178 vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~p~li--t~~~l~  255 (370)
T TIGR00518       178 VGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKAPKLV--SNSLVA  255 (370)
T ss_pred             HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCCCcCc--CHHHHh
Confidence            47788899999999999999999988777554 321   11   235567789999999984321 112222  144445


Q ss_pred             cCCCCcEEEeccCCCch
Q psy755           73 HAKPGVIVIDSSTVDPQ   89 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~   89 (183)
                      .++++.+|+|.+.....
T Consensus       256 ~mk~g~vIvDva~d~GG  272 (370)
T TIGR00518       256 QMKPGAVIVDVAIDQGG  272 (370)
T ss_pred             cCCCCCEEEEEecCCCC
Confidence            67899999998854433

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.47  E-value=0.00011  Score=59.89  Aligned_cols=81  Identities=20%  Similarity=0.341  Sum_probs=56.4

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CCc--ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC--
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GAN--MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA--   74 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~~--~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l--   74 (183)
                      ||..++..|...|. +|++++|++++.+.+.+. |..  ..++..+.+..+|+||.|++.+..+-.-    +.+.+.+  
T Consensus       193 iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVI~aT~s~~~~i~~----~~l~~~~~~  268 (423)
T PRK00045        193 MGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIVISSTGAPHPIIGK----GMVERALKA  268 (423)
T ss_pred             HHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEEEECCCCCCcEEcH----HHHHHHHhh
Confidence            68889999998997 799999999987766554 422  2245566788999999999876653211    2233322  


Q ss_pred             --CCCcEEEeccC
Q psy755           75 --KPGVIVIDSST   85 (183)
Q Consensus        75 --~~~~iiid~s~   85 (183)
                        ..+.+++|.+.
T Consensus       269 ~~~~~~vviDla~  281 (423)
T PRK00045        269 RRHRPLLLVDLAV  281 (423)
T ss_pred             ccCCCeEEEEeCC
Confidence              24568889874

>PLN00203 glutamyl-tRNA reductase

Probab=97.45  E-value=0.00018  Score=59.95  Aligned_cols=59  Identities=15%  Similarity=0.318  Sum_probs=47.3

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc--CC----cccCCHHHHhccCCEEEEecCChHH
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE--GA----NMALSLSTLASGAEFIISMLPASQD   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~--g~----~~~~~~~~~~~~adiVi~~vp~~~~   59 (183)
                      ||..+++.|...|+ +|++++|+.++.+.+.+.  +.    ...++..+.+.++|+||.|++.+..
T Consensus       277 mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~p  342 (519)
T PLN00203        277 MGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETP  342 (519)
T ss_pred             HHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCC
Confidence            78899999999997 799999999998887764  22    1234667788999999999977654

>PRK08291 ectoine utilization protein EutC; Validated

Probab=97.42  E-value=0.0004  Score=54.79  Aligned_cols=81  Identities=16%  Similarity=0.285  Sum_probs=55.8

Q ss_pred             cHHHHHHHHh-CC-CcEEEEcCCchhHHHHHHc-----CCc--ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLK-NG-HDVIVYDKNTDASQTLAKE-----GAN--MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~-~g-~~V~~~~~~~~~~~~~~~~-----g~~--~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |+..+..+.. .+ .+|.+|+|++++.+.+.+.     ++.  ..+++++++.++|+|+.++|...+   ++   +  ..
T Consensus       144 a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p---~i---~--~~  215 (330)
T PRK08291        144 ARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEP---IL---K--AE  215 (330)
T ss_pred             HHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCc---Ee---c--HH
Confidence            4555566664 34 4799999999998887653     332  357888999999999999988543   22   1  12


Q ss_pred             cCCCCcEEEeccCCCchh
Q psy755           73 HAKPGVIVIDSSTVDPQV   90 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~   90 (183)
                      .+++|..|....+..|..
T Consensus       216 ~l~~g~~v~~vg~d~~~~  233 (330)
T PRK08291        216 WLHPGLHVTAMGSDAEHK  233 (330)
T ss_pred             HcCCCceEEeeCCCCCCc
Confidence            467888887766554433

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=97.37  E-value=0.0002  Score=56.12  Aligned_cols=70  Identities=21%  Similarity=0.416  Sum_probs=45.2

Q ss_pred             cEEEEcCCchhHHHHHHc----C--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCc
Q psy755           15 DVIVYDKNTDASQTLAKE----G--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDP   88 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~   88 (183)
                      +|.+|+|++++.+++.+.    +  +..+++.++++++||+|+.|+|..... .++   +  ..++++|.+|+..++..|
T Consensus       155 ~v~v~~r~~~~~~~~~~~~~~~~~~v~~~~~~~~av~~aDii~taT~s~~~~-P~~---~--~~~l~~g~hi~~iGs~~~  228 (313)
T PF02423_consen  155 EVRVYSRSPERAEAFAARLRDLGVPVVAVDSAEEAVRGADIIVTATPSTTPA-PVF---D--AEWLKPGTHINAIGSYTP  228 (313)
T ss_dssp             EEEEE-SSHHHHHHHHHHHHCCCTCEEEESSHHHHHTTSSEEEE----SSEE-ESB------GGGS-TT-EEEE-S-SST
T ss_pred             EEEEEccChhHHHHHHHhhccccccceeccchhhhcccCCEEEEccCCCCCC-ccc---c--HHHcCCCcEEEEecCCCC
Confidence            799999999988777653    3  345789999999999999999886510 222   1  347889999998888777


Q ss_pred             hh
Q psy755           89 QV   90 (183)
Q Consensus        89 ~~   90 (183)
                      ..
T Consensus       229 ~~  230 (313)
T PF02423_consen  229 GM  230 (313)
T ss_dssp             TB
T ss_pred             ch
Confidence            54

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.37  E-value=0.00016  Score=58.83  Aligned_cols=81  Identities=22%  Similarity=0.421  Sum_probs=55.6

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHHc-CC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC-
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKE-GA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK-   75 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~-g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~-   75 (183)
                      ||..+++.|...| .+|++++|++++.+.+.+. +.  ...++..+.+.++|+||.|++.+..+-.-    +.+.+.+. 
T Consensus       191 iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~~ii~~----e~l~~~~~~  266 (417)
T TIGR01035       191 MGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPHPIVSK----EDVERALRE  266 (417)
T ss_pred             HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCCceEcH----HHHHHHHhc
Confidence            6888999999999 6899999999987766543 32  22345667788999999999876653111    22333222 


Q ss_pred             --CCcEEEeccC
Q psy755           76 --PGVIVIDSST   85 (183)
Q Consensus        76 --~~~iiid~s~   85 (183)
                        .+.+++|.+.
T Consensus       267 ~~~~~~viDla~  278 (417)
T TIGR01035       267 RTRPLFIIDIAV  278 (417)
T ss_pred             CCCCeEEEEeCC
Confidence              2347889874

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR01921 DAP-DH diaminopimelate dehydrogenase

Probab=97.35  E-value=0.0052  Score=48.18  Aligned_cols=76  Identities=7%  Similarity=0.138  Sum_probs=53.3

Q ss_pred             CcHHHHHHHHhC-CCcEEE-EcCCc-hhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKN-GHDVIV-YDKNT-DASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~-~~~~~-~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+..+..+.+. ++++++ +|+++ ++..  ...++....+..+...+.|+|++|+|...+.+.+       .+.|..|
T Consensus        14 IGr~~a~al~~~pd~ELVgV~dr~~~~~~~--~~~~v~~~~d~~e~l~~iDVViIctPs~th~~~~-------~~~L~aG   84 (324)
T TIGR01921        14 LGRSVEKAIQQQPDMELVGVFSRRGAETLD--TETPVYAVADDEKHLDDVDVLILCMGSATDIPEQ-------APYFAQF   84 (324)
T ss_pred             HHHHHHHHHHhCCCcEEEEEEcCCcHHHHh--hcCCccccCCHHHhccCCCEEEEcCCCccCHHHH-------HHHHHcC
Confidence            578888888765 678775 79986 4332  1124444456667778899999999986664444       4668899


Q ss_pred             cEEEeccC
Q psy755           78 VIVIDSST   85 (183)
Q Consensus        78 ~iiid~s~   85 (183)
                      ..+|++.-
T Consensus        85 ~NVV~s~~   92 (324)
T TIGR01921        85 ANTVDSFD   92 (324)
T ss_pred             CCEEECCC
Confidence            99998854

This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.

>PRK06046 alanine dehydrogenase; Validated

Probab=97.35  E-value=0.00052  Score=54.05  Aligned_cols=96  Identities=13%  Similarity=0.223  Sum_probs=63.5

Q ss_pred             cHHHHHHHHhC-CC-cEEEEcCCchhHHHHHHc-----C--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLKN-GH-DVIVYDKNTDASQTLAKE-----G--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~~-g~-~V~~~~~~~~~~~~~~~~-----g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |+..+..+... +. +|.+|||++++.+++.+.     +  +...++.+++++ +|+|++|+|...+   ++.     .+
T Consensus       141 a~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~P---~~~-----~~  211 (326)
T PRK06046        141 ARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRKP---VVK-----AE  211 (326)
T ss_pred             HHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCCc---Eec-----HH
Confidence            45556666533 33 688999999988876653     3  234668888887 9999999998543   221     24


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++++|++|...++..|...+--.+.+.. .-.|+|
T Consensus       212 ~l~~g~hV~~iGs~~p~~~El~~~~~~~-a~vvvD  245 (326)
T PRK06046        212 WIKEGTHINAIGADAPGKQELDPEILLR-AKVVVD  245 (326)
T ss_pred             HcCCCCEEEecCCCCCccccCCHHHHhC-CcEEEC
Confidence            6789999998888877543333333332 234566

>PRK04148 hypothetical protein; Provisional

Probab=97.33  E-value=0.0026  Score=43.40  Aligned_cols=83  Identities=25%  Similarity=0.227  Sum_probs=65.1

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-----ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-----MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |..+|..|.+.|++|++.|.+++.++.+.+.+..     ..+...++-+++|+|-..=|+++-.+.+    .++...+..
T Consensus        28 G~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp~el~~~~----~~la~~~~~  103 (134)
T PRK04148         28 YFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPPRDLQPFI----LELAKKINV  103 (134)
T ss_pred             CHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCCHHHHHHH----HHHHHHcCC
Confidence            4568999999999999999999999988777542     2233446678999999999987766666    577778888


Q ss_pred             CcEEEeccCCCc
Q psy755           77 GVIVIDSSTVDP   88 (183)
Q Consensus        77 ~~iiid~s~~~~   88 (183)
                      +.+|...|+-.|
T Consensus       104 ~~~i~~l~~e~~  115 (134)
T PRK04148        104 PLIIKPLSGEEP  115 (134)
T ss_pred             CEEEEcCCCCCC
Confidence            888887777554

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.33  E-value=0.0027  Score=41.98  Aligned_cols=97  Identities=16%  Similarity=0.184  Sum_probs=61.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-cC---CHH---H-HhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-AL---SLS---T-LASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~---~~~---~-~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      +|..+++.|.+.+.+|++.|++++.++.+.+.+... ..   +..   + -+++++.|++++++...--.+.   ..+..
T Consensus         9 ~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~~---~~~r~   85 (116)
T PF02254_consen    9 IGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLIA---LLARE   85 (116)
T ss_dssp             HHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHHH---HHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHHH---HHHHH
Confidence            478899999997779999999999999999887422 11   121   1 1468999999998865444443   33333


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEE
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFL  106 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~  106 (183)
                      ..+..++++-..+      ....+.+...|+..+
T Consensus        86 ~~~~~~ii~~~~~------~~~~~~l~~~g~d~v  113 (116)
T PF02254_consen   86 LNPDIRIIARVND------PENAELLRQAGADHV  113 (116)
T ss_dssp             HTTTSEEEEEESS------HHHHHHHHHTT-SEE
T ss_pred             HCCCCeEEEEECC------HHHHHHHHHCCcCEE
Confidence            3434455553333      233455555666544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.30  E-value=0.00065  Score=54.66  Aligned_cols=107  Identities=26%  Similarity=0.289  Sum_probs=71.2

Q ss_pred             CcHHHHHHHHhCC-C-cEEEEcCCchhHHHHHHc----C-------CcccCCHHHHhccCCEEEEecCChHHHHHHhcCC
Q psy755            1 MGSHMARNLLKNG-H-DVIVYDKNTDASQTLAKE----G-------ANMALSLSTLASGAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         1 mG~~iA~~l~~~g-~-~V~~~~~~~~~~~~~~~~----g-------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      ||+.+++.|++.+ + +|++.||+.++++++.+.    +       +...+++.++++++|+||.|+|+. .-..++   
T Consensus         9 vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~-~~~~v~---   84 (386)
T PF03435_consen    9 VGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF-FGEPVA---   84 (386)
T ss_dssp             HHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG-GHHHHH---
T ss_pred             HHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc-hhHHHH---
Confidence            5889999999886 4 899999999999888752    1       111123566788999999999875 333343   


Q ss_pred             ccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHH
Q psy755           68 DGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTK  115 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~  115 (183)
                         ...+..|..++|.+. .......+.+.++++|..++. +.+..|..
T Consensus        85 ---~~~i~~g~~yvD~~~-~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~  129 (386)
T PF03435_consen   85 ---RACIEAGVHYVDTSY-VTEEMLALDEEAKEAGVTALPGCGFDPGLS  129 (386)
T ss_dssp             ---HHHHHHT-EEEESS--HHHHHHHCHHHHHHTTSEEE-S-BTTTBHH
T ss_pred             ---HHHHHhCCCeeccch-hHHHHHHHHHHHHhhCCEEEeCcccccchH
Confidence               345678889999332 244556667777778877666 56666543

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK05225 ketol-acid reductoisomerase; Validated

Probab=97.28  E-value=0.00042  Score=56.31  Aligned_cols=75  Identities=17%  Similarity=0.240  Sum_probs=57.9

Q ss_pred             cHHHHHHHHhCCCcEEEEcCC------chhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKN------TDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      |.+-|.+|...|++|++.-|.      ....+++.+.|... .++.|+++.||+|++.+|+.+ -..+.   +++.+.++
T Consensus        48 G~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v-~~~~Ea~~~ADvVviLlPDt~-q~~v~---~~i~p~LK  122 (487)
T PRK05225         48 GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKV-GTYEELIPQADLVINLTPDKQ-HSDVV---RAVQPLMK  122 (487)
T ss_pred             HHHHhCCCccccceeEEeccccccccccchHHHHHhcCCcc-CCHHHHHHhCCEEEEcCChHH-HHHHH---HHHHhhCC
Confidence            677788888889998854333      44566666677755 589999999999999999974 34444   88999999


Q ss_pred             CCcEEE
Q psy755           76 PGVIVI   81 (183)
Q Consensus        76 ~~~iii   81 (183)
                      +|..+.
T Consensus       123 ~Ga~L~  128 (487)
T PRK05225        123 QGAALG  128 (487)
T ss_pred             CCCEEE
Confidence            998875

>PRK07589 ornithine cyclodeaminase; Validated

Probab=97.27  E-value=0.00052  Score=54.40  Aligned_cols=72  Identities=18%  Similarity=0.291  Sum_probs=52.2

Q ss_pred             CcEEEEcCCchhHHHHHHc----C--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           14 HDVIVYDKNTDASQTLAKE----G--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        14 ~~V~~~~~~~~~~~~~~~~----g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .+|++|+|++++.+.+.+.    +  +..+++.++++++||+|+.++|.... ..++   +  .+++++|.+|.-.++..
T Consensus       155 ~~V~v~~r~~~~a~~~~~~~~~~~~~v~~~~~~~~av~~ADIIvtaT~S~~~-~Pvl---~--~~~lkpG~hV~aIGs~~  228 (346)
T PRK07589        155 EEIRLYDIDPAATAKLARNLAGPGLRIVACRSVAEAVEGADIITTVTADKTN-ATIL---T--DDMVEPGMHINAVGGDC  228 (346)
T ss_pred             eEEEEEeCCHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEecCCCCC-Ccee---c--HHHcCCCcEEEecCCCC
Confidence            3899999999988776542    3  34468899999999999999976431 1222   1  24678999988887776


Q ss_pred             chhH
Q psy755           88 PQVP   91 (183)
Q Consensus        88 ~~~~   91 (183)
                      |..-
T Consensus       229 p~~~  232 (346)
T PRK07589        229 PGKT  232 (346)
T ss_pred             CCcc
Confidence            6553

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.24  E-value=0.0026  Score=53.81  Aligned_cols=64  Identities=16%  Similarity=0.303  Sum_probs=47.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cC-CHHHH-----hccCCEEEEecCChHHHHHHh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--AL-SLSTL-----ASGAEFIISMLPASQDVLDAY   64 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~-~~~~~-----~~~adiVi~~vp~~~~~~~v~   64 (183)
                      +|+.+++.|.+.|++|++.|.|+++++++.+.|...  .| +.++.     ++++|.++++++++.....+.
T Consensus       428 ~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~~~~~iv  499 (558)
T PRK10669        428 VGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGYEAGEIV  499 (558)
T ss_pred             HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChHHHHHHH
Confidence            478999999999999999999999999998875321  11 12222     458999999998866544443

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.24  E-value=0.00077  Score=47.96  Aligned_cols=63  Identities=25%  Similarity=0.336  Sum_probs=47.7

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |..+++.|.+.|.+|++.+|+.              +++.+.+.++|+||.+++.+.    ++.  .   +.++++.+++
T Consensus        57 G~~~a~~L~~~g~~V~v~~r~~--------------~~l~~~l~~aDiVIsat~~~~----ii~--~---~~~~~~~viI  113 (168)
T cd01080          57 GKPLAALLLNRNATVTVCHSKT--------------KNLKEHTKQADIVIVAVGKPG----LVK--G---DMVKPGAVVI  113 (168)
T ss_pred             HHHHHHHHhhCCCEEEEEECCc--------------hhHHHHHhhCCEEEEcCCCCc----eec--H---HHccCCeEEE
Confidence            6668888999988888888874              356678899999999998864    221  1   2456789999


Q ss_pred             eccCCC
Q psy755           82 DSSTVD   87 (183)
Q Consensus        82 d~s~~~   87 (183)
                      |.+...
T Consensus       114 Dla~pr  119 (168)
T cd01080         114 DVGINR  119 (168)
T ss_pred             EccCCC
Confidence            998644

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR03855 NAD_NadX aspartate dehydrogenase

Probab=97.22  E-value=0.0032  Score=47.11  Aligned_cols=85  Identities=20%  Similarity=0.241  Sum_probs=59.8

Q ss_pred             EEEEcCCchhHHHHHHc-CCcccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCC---Cchh
Q psy755           16 VIVYDKNTDASQTLAKE-GANMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV---DPQV   90 (183)
Q Consensus        16 V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~---~~~~   90 (183)
                      +.+||+++++.+.+.+. |...+++.++++ .+.|+|++|+|...+.+..       ...+..|+.++-.+..   ....
T Consensus         5 vaV~D~~~e~a~~~a~~~g~~~~~d~~eLl~~~vDaVviatp~~~H~e~a-------~~aL~aGkhVl~~s~gAlad~e~   77 (229)
T TIGR03855         5 AAVYDRNPKDAKELAERCGAKIVSDFDEFLPEDVDIVVEAASQEAVKEYA-------EKILKNGKDLLIMSVGALADREL   77 (229)
T ss_pred             EEEECCCHHHHHHHHHHhCCceECCHHHHhcCCCCEEEECCChHHHHHHH-------HHHHHCCCCEEEECCcccCCHHH
Confidence            45689999998887665 667788899886 5799999999986654444       3456777766555543   2345


Q ss_pred             HHHHHHHHHhcCCcEEe
Q psy755           91 PQTLSNLAREKQITFLD  107 (183)
Q Consensus        91 ~~~~~~~~~~~g~~~~~  107 (183)
                      .+.+.+..++.|..+.-
T Consensus        78 ~~~l~~aA~~~g~~l~i   94 (229)
T TIGR03855        78 RERLREVARSSGRKVYI   94 (229)
T ss_pred             HHHHHHHHHhcCCEEEE
Confidence            66777777777765433

Members of this protein family are L-aspartate dehydrogenase, as shown for the NADP-dependent enzyme TM_1643 of Thermotoga maritima. Members lack homology to NadB, the aspartate oxidase (EC 1.4.3.16) of most mesophilic bacteria (described by TIGR00551), which this enzyme replaces in the generation of oxaloacetate from aspartate for the NAD biosynthetic pathway. All members of the seed alignment are found adjacent to other genes of NAD biosynthesis, although other uses of L-aspartate dehydrogenase may occur.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.18  E-value=0.0024  Score=44.04  Aligned_cols=66  Identities=23%  Similarity=0.335  Sum_probs=48.4

Q ss_pred             CCcEEEEcCCchhHHHHHH----cCC--cccC----CHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEe
Q psy755           13 GHDVIVYDKNTDASQTLAK----EGA--NMAL----SLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVID   82 (183)
Q Consensus        13 g~~V~~~~~~~~~~~~~~~----~g~--~~~~----~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid   82 (183)
                      |.+|++|+|+....+.+..    .|.  ..++    ++++.+++||+|+.+++.+..    +   +  .+++++|.+|+|
T Consensus        28 gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~v~~ADIVvsAtg~~~~----i---~--~~~ikpGa~Vid   98 (140)
T cd05212          28 GKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSKVHDADVVVVGSPKPEK----V---P--TEWIKPGATVIN   98 (140)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEecCCCCc----c---C--HHHcCCCCEEEE
Confidence            4589999999987655443    343  2333    688899999999999987632    2   1  357889999999


Q ss_pred             ccCCC
Q psy755           83 SSTVD   87 (183)
Q Consensus        83 ~s~~~   87 (183)
                      .+...
T Consensus        99 vg~~~  103 (140)
T cd05212          99 CSPTK  103 (140)
T ss_pred             cCCCc
Confidence            88655

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.17  E-value=0.00055  Score=55.58  Aligned_cols=78  Identities=15%  Similarity=0.235  Sum_probs=56.1

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-C-C--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-G-A--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g-~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||+.++..|...|. ++++++|+.++.+.+.+. + .  ...+++.+.+.++|+||.|++.+..+-..    +.+.   .
T Consensus       192 ~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~~vi~~----~~~~---~  264 (414)
T PRK13940        192 TGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLEYIVTC----KYVG---D  264 (414)
T ss_pred             HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCCeeECH----HHhC---C
Confidence            68899999999996 799999999998887764 3 2  22355677789999999999887653111    1111   2


Q ss_pred             CCcEEEeccC
Q psy755           76 PGVIVIDSST   85 (183)
Q Consensus        76 ~~~iiid~s~   85 (183)
                      +..+++|.+-
T Consensus       265 ~~~~~iDLav  274 (414)
T PRK13940        265 KPRVFIDISI  274 (414)
T ss_pred             CCeEEEEeCC
Confidence            3457788764

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.14  E-value=0.0031  Score=53.75  Aligned_cols=98  Identities=17%  Similarity=0.186  Sum_probs=65.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cC-CHHHH-----hccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--AL-SLSTL-----ASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~-~~~~~-----~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      +|+.+++.|.+.|+++++.|.|+++++.+.+.|...  .| +..+.     +++||.+++++++++....++   .....
T Consensus       411 ~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n~~i~---~~~r~  487 (601)
T PRK03659        411 FGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDTMKIV---ELCQQ  487 (601)
T ss_pred             HHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHHHHHH---HHHHH
Confidence            478899999999999999999999999998876421  11 22222     468999999999977665554   33444


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+.-++++-..+      +.-.+.+.+.|...+-
T Consensus       488 ~~p~~~IiaRa~~------~~~~~~L~~~Ga~~vv  516 (601)
T PRK03659        488 HFPHLHILARARG------RVEAHELLQAGVTQFS  516 (601)
T ss_pred             HCCCCeEEEEeCC------HHHHHHHHhCCCCEEE
Confidence            3333355542222      2334556667877664

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.12  E-value=0.0015  Score=50.28  Aligned_cols=64  Identities=17%  Similarity=0.309  Sum_probs=47.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|..|.+.|..|+++++..              .++.+.+++||+||.+++.+..    +   .  .+.+++|.+|
T Consensus       170 VG~pla~lL~~~gatVtv~~s~t--------------~~l~~~~~~ADIVIsAvg~p~~----i---~--~~~vk~gavV  226 (286)
T PRK14175        170 VGQPVSKLLLQKNASVTILHSRS--------------KDMASYLKDADVIVSAVGKPGL----V---T--KDVVKEGAVI  226 (286)
T ss_pred             hHHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHHhhCCEEEECCCCCcc----c---C--HHHcCCCcEE
Confidence            47778888887777777776432              3577889999999999988652    2   1  1357889999


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      ||.+...
T Consensus       227 IDvGi~~  233 (286)
T PRK14175        227 IDVGNTP  233 (286)
T ss_pred             EEcCCCc
Confidence            9999643

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.12  E-value=0.00067  Score=54.68  Aligned_cols=81  Identities=21%  Similarity=0.370  Sum_probs=57.6

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC-
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK-   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~-   75 (183)
                      ||.-.|++|.++|. +|++.+|+.++++.+++. |.  ...+++.+.+.++|+||.++..+..+-.-    ..+...+. 
T Consensus       189 m~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii~~----~~ve~a~~~  264 (414)
T COG0373         189 MGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPIITR----EMVERALKI  264 (414)
T ss_pred             HHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCccccCH----HHHHHHHhc
Confidence            78889999999995 899999999999888765 53  34456777889999999998776543211    22222222 


Q ss_pred             -CCcEEEeccC
Q psy755           76 -PGVIVIDSST   85 (183)
Q Consensus        76 -~~~iiid~s~   85 (183)
                       ++.+++|.+.
T Consensus       265 r~~~livDiav  275 (414)
T COG0373         265 RKRLLIVDIAV  275 (414)
T ss_pred             ccCeEEEEecC
Confidence             2246788775

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.10  E-value=0.0027  Score=49.01  Aligned_cols=103  Identities=17%  Similarity=0.102  Sum_probs=65.0

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-C----Cccc---CCHHHHhccCCEEEEecCChHHHHHHhcCCccc-
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-G----ANMA---LSLSTLASGAEFIISMLPASQDVLDAYDGSDGI-   70 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g----~~~~---~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l-   70 (183)
                      +|++++..|.+.|. +|++++|++++.+.+.+. +    +...   ++..+.+.++|+||-|+|.+........  ... 
T Consensus       136 aarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~~~~~~~l--~~~~  213 (282)
T TIGR01809       136 TSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADVPADYVDL--FATV  213 (282)
T ss_pred             HHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCCCCCHHHh--hhhh
Confidence            57899999999997 799999999998887653 1    1111   1233455789999999997653321100  000 


Q ss_pred             ----cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           71 ----LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        71 ----~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                          ...++++.+++|.--....+  .+.+..+++|...++
T Consensus       214 ~~~~~~~~~~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~  252 (282)
T TIGR01809       214 PFLLLKRKSSEGIFLDAAYDPWPT--PLVAIVSAAGWRVIS  252 (282)
T ss_pred             hhhccccCCCCcEEEEEeeCCCCC--HHHHHHHHCCCEEEC
Confidence                01234677888888544333  345555667766665

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=97.07  E-value=0.0023  Score=45.09  Aligned_cols=42  Identities=21%  Similarity=0.313  Sum_probs=28.6

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCc
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDP   88 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~   88 (183)
                      .++++.+++||+||.++..+..++         .+++++|.+|||++....
T Consensus        71 ~~l~~~~~~ADIVVsa~G~~~~i~---------~~~ik~gavVIDvG~~~~  112 (160)
T PF02882_consen   71 KNLQEITRRADIVVSAVGKPNLIK---------ADWIKPGAVVIDVGINYV  112 (160)
T ss_dssp             SSHHHHHTTSSEEEE-SSSTT-B----------GGGS-TTEEEEE--CEEE
T ss_pred             CcccceeeeccEEeeeeccccccc---------cccccCCcEEEecCCccc
Confidence            467888999999999998765322         246889999999987544

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>TIGR01761 thiaz-red thiazolinyl imide reductase

Probab=97.06  E-value=0.009  Score=47.39  Aligned_cols=100  Identities=16%  Similarity=0.246  Sum_probs=67.4

Q ss_pred             CcHHHHHHHHhC--CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCC----hHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKN--GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPA----SQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~----~~~~~~v~~~~~~l~~   72 (183)
                      ||...+..+.+.  +++++ ++|+++++.+++.+. |+..+++.++++++.|++++++|.    ..+.+-+       ..
T Consensus        13 ~G~~h~~al~~~~~~~eLvaV~d~~~erA~~~A~~~gi~~y~~~eell~d~Di~~V~ipt~~P~~~H~e~a-------~~   85 (343)
T TIGR01761        13 FGQFYLAAFAAAPERFELAGILAQGSERSRALAHRLGVPLYCEVEELPDDIDIACVVVRSAIVGGQGSALA-------RA   85 (343)
T ss_pred             HHHHHHHHHHhCCCCcEEEEEEcCCHHHHHHHHHHhCCCccCCHHHHhcCCCEEEEEeCCCCCCccHHHHH-------HH
Confidence            355566667664  46766 479999998887765 777788999999989999999864    2332222       34


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+..|+.|+--=-........+.+..+++|..+.-
T Consensus        86 aL~aGkHVL~EKPla~~Ea~el~~~A~~~g~~l~v  120 (343)
T TIGR01761        86 LLARGIHVLQEHPLHPRDIQDLLRLAERQGRRYLV  120 (343)
T ss_pred             HHhCCCeEEEcCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            56788776632222245666777777777776554

This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).

>KOG1683|consensus

Probab=97.01  E-value=0.00099  Score=52.35  Aligned_cols=145  Identities=15%  Similarity=0.093  Sum_probs=80.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------cC---------C--cccCCH-HHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------EG---------A--NMALSL-STLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g---------~--~~~~~~-~~~~~~adiVi~~vp~~   57 (183)
                      ||+.||..+..+|++++..|.+..-.++...           .+         .  ....++ ..-++++|+|+.++-.+
T Consensus         1 MG~gia~~~~~~~i~~vl~~~n~~~~~~~~~~v~a~l~~~~~~~~~~~~~~~~~~~~L~~~~Dy~~~~~~dmvieav~ed   80 (380)
T KOG1683|consen    1 MGAGIAIVFILAGIRTVLVDANVALLARGILQLAAHLNSEVKRGRLSGLEREKTKSNLVETLDYTGFANADMVIEAVFED   80 (380)
T ss_pred             CcchHHHHHHHcCCcEEEEeccHHHHHHhHHHHHHhhhHHHhhccccccchhhhhhhcccccccccccccceeccchhhh
Confidence            9999999999999999999999765442211           11         1  011111 12356899999999887


Q ss_pred             HHHHHHhcCCccccccCCCCcEEEeccCCCchhH-HHHHHHHHh-cCCcEEeecccCCHHHHhcCceEEEecCCHHHHHH
Q psy755           58 QDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVP-QTLSNLARE-KQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEK  135 (183)
Q Consensus        58 ~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  135 (183)
                      ..+++-++  .++...-++..++-..+|+.+... .+....... .|.||......     ...-+......++......
T Consensus        81 l~Lk~~l~--~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg~h~fspa~~-----m~LlEii~~~~tS~~~iA~  153 (380)
T KOG1683|consen   81 LELKHELF--KSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVGMHFFSPAHW-----MQLLEIILALYTSKLTIAT  153 (380)
T ss_pred             HHHHHHHH--HHHHhhcCCcceeeeccccCChHHHhhccCchhhhccccccCHHHH-----HHHHHHHHhcCCCchHHHH
Confidence            77776554  666665555565544444444433 222222211 15565552111     1111111222345555555


Q ss_pred             HHHHHHHhcCCeEEeCC
Q psy755          136 AKPILKCMGRNIVHCGD  152 (183)
Q Consensus       136 ~~~l~~~~g~~~~~~g~  152 (183)
                      +-+.-..+|+-++.+++
T Consensus       154 Ain~~~~~gk~~vvVg~  170 (380)
T KOG1683|consen  154 AINGGSPAGKLPVVVGN  170 (380)
T ss_pred             HHhcccccCCccEEecc
Confidence            55666666666666665

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=96.98  E-value=0.0038  Score=48.34  Aligned_cols=102  Identities=10%  Similarity=0.129  Sum_probs=63.2

Q ss_pred             CcHHHHHHHHhCCCc-EEEEcCCc---hhHHHHHHc----C----Cccc--C---CHHHHhccCCEEEEecCChHHHHHH
Q psy755            1 MGSHMARNLLKNGHD-VIVYDKNT---DASQTLAKE----G----ANMA--L---SLSTLASGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         1 mG~~iA~~l~~~g~~-V~~~~~~~---~~~~~~~~~----g----~~~~--~---~~~~~~~~adiVi~~vp~~~~~~~v   63 (183)
                      +|++++..|++.|++ |++++|++   ++.+.+.+.    +    ....  +   +..+.++.+|+||-++|.+..-..-
T Consensus       137 agrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilINaTp~Gm~~~~~  216 (289)
T PRK12548        137 AATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILVNATLVGMKPNDG  216 (289)
T ss_pred             HHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEEEeCCCCCCCCCC
Confidence            378899999999996 99999997   555554321    1    1111  1   1233456789999999876421000


Q ss_pred             hcCCccc--cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           64 YDGSDGI--LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        64 ~~~~~~l--~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      -   .-+  ...++++.+++|..-....+  .+.+..++.|.+.++
T Consensus       217 ~---~~~~~~~~l~~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~  257 (289)
T PRK12548        217 E---TNIKDTSVFRKDLVVADTVYNPKKT--KLLEDAEAAGCKTVG  257 (289)
T ss_pred             C---CCCCcHHhcCCCCEEEEecCCCCCC--HHHHHHHHCCCeeeC
Confidence            0   001  23467788999998655444  355566677877666

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.96  E-value=0.0028  Score=45.91  Aligned_cols=78  Identities=21%  Similarity=0.187  Sum_probs=52.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHH-HHHcCCccc--CC----HHHHhccCCEEEEecCChHH-HHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQT-LAKEGANMA--LS----LSTLASGAEFIISMLPASQD-VLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~-~~~~g~~~~--~~----~~~~~~~adiVi~~vp~~~~-~~~v~~~~~~l~~   72 (183)
                      .|+.+|..|.+.|..|++.|.+....-. ....+-..+  .+    +.+.+++||+||.+++.+.. ++         .+
T Consensus        74 VGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~---------~d  144 (197)
T cd01079          74 VGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVP---------TE  144 (197)
T ss_pred             chHHHHHHHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCCCCCccC---------HH
Confidence            4899999999999999999755432200 000000011  12    67889999999999998653 22         34


Q ss_pred             cCCCCcEEEeccCCC
Q psy755           73 HAKPGVIVIDSSTVD   87 (183)
Q Consensus        73 ~l~~~~iiid~s~~~   87 (183)
                      .+++|.+|||.+...
T Consensus       145 ~ik~GavVIDVGi~~  159 (197)
T cd01079         145 LLKDGAICINFASIK  159 (197)
T ss_pred             HcCCCcEEEEcCCCc
Confidence            678999999999653

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.94  E-value=0.0059  Score=47.70  Aligned_cols=81  Identities=15%  Similarity=0.213  Sum_probs=52.2

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHH-H---Hc--------CCcccCCHHHHhccCCEEEEecCChH---------
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTL-A---KE--------GANMALSLSTLASGAEFIISMLPASQ---------   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~-~---~~--------g~~~~~~~~~~~~~adiVi~~vp~~~---------   58 (183)
                      ||..+|..++..|+ +|+++|++++..+.. .   +.        .+..+.+.++ +++||+||++++.+.         
T Consensus        12 vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~p~~~~~sR~~l   90 (305)
T TIGR01763        12 VGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGLPRKPGMSREDL   90 (305)
T ss_pred             HHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCCCCCcCCCHHHH
Confidence            79999999999887 899999977643311 1   10        1223456666 789999999998432         


Q ss_pred             ------HHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           59 ------DVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        59 ------~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                            .++.+.   +.+.+.. ++.+|+..|+-
T Consensus        91 ~~~N~~iv~~i~---~~I~~~~-p~~~iIv~tNP  120 (305)
T TIGR01763        91 LSMNAGIVREVT---GRIMEHS-PNPIIVVVSNP  120 (305)
T ss_pred             HHHHHHHHHHHH---HHHHHHC-CCeEEEEecCc
Confidence                  122232   4455554 55666666663

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.91  E-value=0.021  Score=42.27  Aligned_cols=95  Identities=16%  Similarity=0.243  Sum_probs=57.9

Q ss_pred             cHHHHHHHHhCC---C-cEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNG---H-DVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g---~-~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |..+...+. .|   + -+.+|||+.+++..+.+. +.....+++|.+...|+++.|-.. ++++...      .+.|..
T Consensus        12 G~~l~e~v~-~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~ide~~~~~DlvVEaAS~-~Av~e~~------~~~L~~   83 (255)
T COG1712          12 GKFLLELVR-DGRVDFELVAVYDRDEEKAKELEASVGRRCVSDIDELIAEVDLVVEAASP-EAVREYV------PKILKA   83 (255)
T ss_pred             HHHHHHHHh-cCCcceeEEEEecCCHHHHHHHHhhcCCCccccHHHHhhccceeeeeCCH-HHHHHHh------HHHHhc
Confidence            444544333 33   4 477899999999988776 455567899999999999999954 6666654      234455


Q ss_pred             Cc--EEEeccCCCchhHHHHHHHHHhcCCc
Q psy755           77 GV--IVIDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        77 ~~--iiid~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      |.  +|+..+...-.......+.+.+.+-+
T Consensus        84 g~d~iV~SVGALad~~l~erl~~lak~~~~  113 (255)
T COG1712          84 GIDVIVMSVGALADEGLRERLRELAKCGGA  113 (255)
T ss_pred             CCCEEEEechhccChHHHHHHHHHHhcCCc
Confidence            54  44444443333333333334444433

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=96.90  E-value=0.0069  Score=46.14  Aligned_cols=100  Identities=16%  Similarity=0.212  Sum_probs=63.2

Q ss_pred             CcHHHHHHHHhC-CCcEEE-EcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKN-GHDVIV-YDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+.+++.+.+. +++++. +|+++++.......++...+++.++++++|+|+.++|+... ...+      ...+..|+
T Consensus        13 mG~~i~~~l~~~~~~elvav~d~~~~~~~~~~~~~i~~~~dl~~ll~~~DvVid~t~p~~~-~~~~------~~al~~G~   85 (257)
T PRK00048         13 MGRELIEAVEAAEDLELVAAVDRPGSPLVGQGALGVAITDDLEAVLADADVLIDFTTPEAT-LENL------EFALEHGK   85 (257)
T ss_pred             HHHHHHHHHHhCCCCEEEEEEecCCccccccCCCCccccCCHHHhccCCCEEEECCCHHHH-HHHH------HHHHHcCC
Confidence            788888888764 677665 78888765544223555667888888889999988876443 3332      34566777


Q ss_pred             EEEeccCC-CchhHHHHHHHHHhcCCcEEeec
Q psy755           79 IVIDSSTV-DPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        79 iiid~s~~-~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      .++-.++. .+.....+.+ .. ++...+-.|
T Consensus        86 ~vvigttG~s~~~~~~l~~-aa-~~~~v~~s~  115 (257)
T PRK00048         86 PLVIGTTGFTEEQLAELEE-AA-KKIPVVIAP  115 (257)
T ss_pred             CEEEECCCCCHHHHHHHHH-Hh-cCCCEEEEC
Confidence            76655544 4455555555 33 444444443

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.84  E-value=0.01  Score=50.84  Aligned_cols=102  Identities=22%  Similarity=0.221  Sum_probs=65.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cC-CHHHH-----hccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--AL-SLSTL-----ASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~-~~~~~-----~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      +|+.+++.|.+.|+++++.|.|+++++.+.+.|...  .| +..+.     ++++|.|++++++++.-..+.   .....
T Consensus       411 ~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~n~~i~---~~ar~  487 (621)
T PRK03562        411 FGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTSLQLV---ELVKE  487 (621)
T ss_pred             HHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHHHHHHH---HHHHH
Confidence            478899999999999999999999999998876422  11 22222     458999999998876555553   33333


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeeccc
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVS  111 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~  111 (183)
                      ..+.-.+++-..+      ..-...+.+.|..++.....
T Consensus       488 ~~p~~~iiaRa~d------~~~~~~L~~~Gad~v~~e~~  520 (621)
T PRK03562        488 HFPHLQIIARARD------VDHYIRLRQAGVEKPERETF  520 (621)
T ss_pred             hCCCCeEEEEECC------HHHHHHHHHCCCCEEehhhH
Confidence            3333344442221      12244556678777654333

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.83  E-value=0.0048  Score=41.13  Aligned_cols=92  Identities=18%  Similarity=0.242  Sum_probs=58.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |.-+.+.|.++|++|+..+...+.+.     |...+.++.|.-...|++++++|. .....++   +++... ..+.+++
T Consensus        16 g~~v~~~l~~~G~~v~~Vnp~~~~i~-----G~~~y~sl~e~p~~iDlavv~~~~-~~~~~~v---~~~~~~-g~~~v~~   85 (116)
T PF13380_consen   16 GYRVLRNLKAAGYEVYPVNPKGGEIL-----GIKCYPSLAEIPEPIDLAVVCVPP-DKVPEIV---DEAAAL-GVKAVWL   85 (116)
T ss_dssp             HHHHHHHHHHTT-EEEEESTTCSEET-----TEE-BSSGGGCSST-SEEEE-S-H-HHHHHHH---HHHHHH-T-SEEEE
T ss_pred             HHHHHHHHHhCCCEEEEECCCceEEC-----cEEeeccccCCCCCCCEEEEEcCH-HHHHHHH---HHHHHc-CCCEEEE
Confidence            56678889999999998886664433     556677888733789999999987 4555665   666543 4555555


Q ss_pred             eccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           82 DSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        82 d~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+    ....++.+.+++.|++++.
T Consensus        86 ~~g----~~~~~~~~~a~~~gi~vig  107 (116)
T PF13380_consen   86 QPG----AESEELIEAAREAGIRVIG  107 (116)
T ss_dssp             -TT----S--HHHHHHHHHTT-EEEE
T ss_pred             Ecc----hHHHHHHHHHHHcCCEEEe
Confidence            444    5556677777788888875

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.81  E-value=0.0045  Score=47.66  Aligned_cols=63  Identities=24%  Similarity=0.333  Sum_probs=42.4

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.++..|.+.|..|+++..              .+.++.+.+++||+||.+++.+..    +   .  .+.+++|.+||
T Consensus       171 GkPla~lL~~~~atVt~~hs--------------~t~~l~~~~~~ADIVV~avG~~~~----i---~--~~~ik~gavVI  227 (285)
T PRK14189        171 GKPMAMLLLQAGATVTICHS--------------KTRDLAAHTRQADIVVAAVGKRNV----L---T--ADMVKPGATVI  227 (285)
T ss_pred             HHHHHHHHHHCCCEEEEecC--------------CCCCHHHHhhhCCEEEEcCCCcCc----c---C--HHHcCCCCEEE
Confidence            45555555555555554321              234677889999999999997542    2   2  25788999999


Q ss_pred             eccCCC
Q psy755           82 DSSTVD   87 (183)
Q Consensus        82 d~s~~~   87 (183)
                      |.+...
T Consensus       228 DVGin~  233 (285)
T PRK14189        228 DVGMNR  233 (285)
T ss_pred             Eccccc
Confidence            998643

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.74  E-value=0.0089  Score=53.73  Aligned_cols=106  Identities=21%  Similarity=0.180  Sum_probs=72.7

Q ss_pred             CcHHHHHHHHhCC-Cc-------------EEEEcCCchhHHHHHHc--C---Ccc-cCCHHHH---hccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNG-HD-------------VIVYDKNTDASQTLAKE--G---ANM-ALSLSTL---ASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~-------------V~~~~~~~~~~~~~~~~--g---~~~-~~~~~~~---~~~adiVi~~vp~~   57 (183)
                      ||+..+..|++.. ++             |.+.|+++++++++.+.  +   +.. ..+.+++   ++.+|+|+.++|..
T Consensus       580 VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~~~DaVIsalP~~  659 (1042)
T PLN02819        580 VCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVSQVDVVISLLPAS  659 (1042)
T ss_pred             HHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhcCCCEEEECCCch
Confidence            5788888998753 33             88899999988877653  3   222 3454444   46899999999986


Q ss_pred             HHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCH
Q psy755           58 QDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGT  114 (183)
Q Consensus        58 ~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~  114 (183)
                      .+..-+       ...+..|+.+++.+ ........+.+.+++.|+.++. +....+.
T Consensus       660 ~H~~VA-------kaAieaGkHvv~ek-y~~~e~~~L~e~Ak~AGV~~m~e~GlDPGi  709 (1042)
T PLN02819        660 CHAVVA-------KACIELKKHLVTAS-YVSEEMSALDSKAKEAGITILCEMGLDPGI  709 (1042)
T ss_pred             hhHHHH-------HHHHHcCCCEEECc-CCHHHHHHHHHHHHHcCCEEEECCccCHHH
Confidence            543332       45677888998887 4445566777888888877666 4444333

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.71  E-value=0.0063  Score=46.83  Aligned_cols=62  Identities=26%  Similarity=0.321  Sum_probs=42.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.++..|.+.|..|+++.+.              +.++.+.++++|+||.+++.+..+.         .+++++|.+||
T Consensus       172 G~Pla~lL~~~~atVtv~hs~--------------T~~l~~~~~~ADIvi~avG~p~~v~---------~~~vk~gavVI  228 (285)
T PRK10792        172 GRPMSLELLLAGCTVTVCHRF--------------TKNLRHHVRNADLLVVAVGKPGFIP---------GEWIKPGAIVI  228 (285)
T ss_pred             HHHHHHHHHHCCCeEEEEECC--------------CCCHHHHHhhCCEEEEcCCCccccc---------HHHcCCCcEEE
Confidence            455555555555555554322              3467888999999999997755322         25688999999


Q ss_pred             eccCC
Q psy755           82 DSSTV   86 (183)
Q Consensus        82 d~s~~   86 (183)
                      |.+..
T Consensus       229 DvGin  233 (285)
T PRK10792        229 DVGIN  233 (285)
T ss_pred             Ecccc
Confidence            99853

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.70  E-value=0.0083  Score=40.42  Aligned_cols=84  Identities=23%  Similarity=0.313  Sum_probs=52.8

Q ss_pred             CcHHHHHHHHh-CCCcEEE-EcCCch-h----HHHHH---HcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLK-NGHDVIV-YDKNTD-A----SQTLA---KEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~-~g~~V~~-~~~~~~-~----~~~~~---~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      ||+.+++.+.+ .+++++. ++++++ .    +..+.   ..++...++++++++.+|+||-.+ .+......+   +  
T Consensus        12 MG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT-~p~~~~~~~---~--   85 (124)
T PF01113_consen   12 MGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT-NPDAVYDNL---E--   85 (124)
T ss_dssp             HHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES--HHHHHHHH---H--
T ss_pred             HHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcC-ChHHhHHHH---H--
Confidence            89999999998 6788665 688772 1    11111   235677889999999999999998 445555544   3  


Q ss_pred             cccCCCCcEEEeccCCCchhH
Q psy755           71 LKHAKPGVIVIDSSTVDPQVP   91 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~~~   91 (183)
                       ..+..|..+|-.|+......
T Consensus        86 -~~~~~g~~~ViGTTG~~~~~  105 (124)
T PF01113_consen   86 -YALKHGVPLVIGTTGFSDEQ  105 (124)
T ss_dssp             -HHHHHT-EEEEE-SSSHHHH
T ss_pred             -HHHhCCCCEEEECCCCCHHH
Confidence             23445777777777665443

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=96.69  E-value=0.025  Score=44.53  Aligned_cols=95  Identities=20%  Similarity=0.274  Sum_probs=63.8

Q ss_pred             HHHHHHhCCC--c-EEEEcCCchhHHHHHHc-CCc-ccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            5 MARNLLKNGH--D-VIVYDKNTDASQTLAKE-GAN-MALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         5 iA~~l~~~g~--~-V~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      .+..+.+.+.  + |.++|+++++++.+.+. ++. .+++.++++++  .|+|++++|+..+.+-+       ...|..|
T Consensus        19 ~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~V~Iatp~~~H~e~~-------~~AL~aG   91 (342)
T COG0673          19 HLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAYTDLEELLADPDIDAVYIATPNALHAELA-------LAALEAG   91 (342)
T ss_pred             hHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEcCCChhhHHHH-------HHHHhcC
Confidence            4445666552  4 55679999998887765 664 67789999875  59999999997776555       3567788


Q ss_pred             cEEEecc--CCCchhHHHHHHHHHhcCCcEE
Q psy755           78 VIVIDSS--TVDPQVPQTLSNLAREKQITFL  106 (183)
Q Consensus        78 ~iiid~s--~~~~~~~~~~~~~~~~~g~~~~  106 (183)
                      +.|+--=  +....+...+.+..++.|..+.
T Consensus        92 khVl~EKPla~t~~ea~~l~~~a~~~~~~l~  122 (342)
T COG0673          92 KHVLCEKPLALTLEEAEELVELARKAGVKLM  122 (342)
T ss_pred             CEEEEcCCCCCCHHHHHHHHHHHHHcCCcee
Confidence            8765211  2234455666677666665433

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.64  E-value=0.0098  Score=46.40  Aligned_cols=54  Identities=19%  Similarity=0.247  Sum_probs=38.2

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHH----c----C--Cc--ccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAK----E----G--AN--MALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~----~----g--~~--~~~~~~~~~~~adiVi~~vp   55 (183)
                      ||..+|..++..|+ +|+++|+++++.+....    .    +  ..  ...+. +.+++||+||+++.
T Consensus        13 vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~   79 (307)
T PRK06223         13 VGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG   79 (307)
T ss_pred             HHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence            68899999998876 99999998876543221    1    1  11  22344 55799999999973

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.63  E-value=0.0085  Score=46.29  Aligned_cols=101  Identities=20%  Similarity=0.184  Sum_probs=64.3

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-----CC--cccCC---HHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-----GA--NMALS---LSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-----g~--~~~~~---~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      |++++..|++.|. +|+++||+.++.+.+.+.     +.  ....+   ..+....+|+||-++|.+..-..-.   .--
T Consensus       139 arAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~Gm~~~~~~---~~~  215 (283)
T PRK14027        139 GNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGT---AFD  215 (283)
T ss_pred             HHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCCCCCCCCCC---CCC
Confidence            6788889999997 799999999998877643     11  11112   2334567999999998654210000   000


Q ss_pred             cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           71 LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ...+.++.++.|..-....+  .+.+..+++|...++
T Consensus       216 ~~~l~~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~  250 (283)
T PRK14027        216 VSCLTKDHWVGDVVYMPIET--ELLKAARALGCETLD  250 (283)
T ss_pred             HHHcCCCcEEEEcccCCCCC--HHHHHHHHCCCEEEc
Confidence            13466778888988655444  345556677877666

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.62  E-value=0.021  Score=42.66  Aligned_cols=62  Identities=18%  Similarity=0.294  Sum_probs=45.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH--cC---Cccc----CCHHHH-hccCCEEEEecCChHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK--EG---ANMA----LSLSTL-ASGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~--~g---~~~~----~~~~~~-~~~adiVi~~vp~~~~~~~v   63 (183)
                      +|..+|+.|.+.||+|++.|++++++++..+  ..   +...    +.+.++ +.++|+++.++.... ...+
T Consensus        11 vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-~N~i   82 (225)
T COG0569          11 VGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-VNSV   82 (225)
T ss_pred             HHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-HHHH
Confidence            4899999999999999999999999988555  22   1111    223344 568999999997743 3443

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.62  E-value=0.0071  Score=46.16  Aligned_cols=54  Identities=15%  Similarity=0.253  Sum_probs=40.9

Q ss_pred             CcHHHHHHHHhCC----CcEEEEcCCchhHHHHHHc-----------CCcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNG----HDVIVYDKNTDASQTLAKE-----------GANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g----~~V~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~adiVi~~v   54 (183)
                      ||..++..|+..|    .+|++||+++++++.....           .+..++++.+.+++||+||++.
T Consensus        10 vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~   78 (263)
T cd00650          10 VGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITA   78 (263)
T ss_pred             HHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECC
Confidence            5889999999888    6999999998776543321           2233556678899999999966

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK06199 ornithine cyclodeaminase; Validated

Probab=96.62  E-value=0.003  Score=50.82  Aligned_cols=66  Identities=9%  Similarity=0.194  Sum_probs=46.1

Q ss_pred             cEEEEcCCchhHHHHHHc------C---CcccCCHHHHhccCCEEEEecCChHH---HHHHhcCCccccccCCCCcEEEe
Q psy755           15 DVIVYDKNTDASQTLAKE------G---ANMALSLSTLASGAEFIISMLPASQD---VLDAYDGSDGILKHAKPGVIVID   82 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~~------g---~~~~~~~~~~~~~adiVi~~vp~~~~---~~~v~~~~~~l~~~l~~~~iiid   82 (183)
                      +|++|+|++++.+.+.+.      +   +..+++.++++++||+|+.|++....   ...++.     ..++++|.+|+.
T Consensus       183 ~V~v~~r~~~~a~~f~~~~~~~~~~~~~v~~~~s~~eav~~ADIVvtaT~s~~~~~s~~Pv~~-----~~~lkpG~hv~~  257 (379)
T PRK06199        183 TIKIKGRGQKSLDSFATWVAETYPQITNVEVVDSIEEVVRGSDIVTYCNSGETGDPSTYPYVK-----REWVKPGAFLLM  257 (379)
T ss_pred             EEEEECCCHHHHHHHHHHHHHhcCCCceEEEeCCHHHHHcCCCEEEEccCCCCCCCCcCcEec-----HHHcCCCcEEec
Confidence            899999999988776542      2   34578899999999999999975331   112221     246788988875


Q ss_pred             ccC
Q psy755           83 SST   85 (183)
Q Consensus        83 ~s~   85 (183)
                      .++
T Consensus       258 ig~  260 (379)
T PRK06199        258 PAA  260 (379)
T ss_pred             CCc
Confidence            443

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.57  E-value=0.02  Score=47.41  Aligned_cols=96  Identities=15%  Similarity=0.135  Sum_probs=61.8

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHH--HHH--------------------cCCcccCCHHHHhccCCEEEEecCChHHH
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQT--LAK--------------------EGANMALSLSTLASGAEFIISMLPASQDV   60 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~--~~~--------------------~g~~~~~~~~~~~~~adiVi~~vp~~~~~   60 (183)
                      ..++..|.+.|.+|.+||.--+..+.  ...                    .++..+++..++++++|+|++++..++ .
T Consensus       347 ~~li~~L~~~G~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~vvi~t~~~e-f  425 (473)
T PLN02353        347 IDVCKGLLGDKAKLSIYDPQVTEEQIQRDLSMNKFDWDHPRHLQPMSPTAVKQVSVVWDAYEATKGAHGICILTEWDE-F  425 (473)
T ss_pred             HHHHHHHHhCCCEEEEECCCCChHHHHHHhhcccccccccccccccccccccceeeeCCHHHHhcCCCEEEECCCChH-h
Confidence            46788899999999999976433221  110                    023445677789999999999998754 4


Q ss_pred             HHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        61 ~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +..-+  +.+.+.+....+|+|..+....      +..++.|+.|..
T Consensus       426 ~~l~~--~~~~~~m~~~~~viD~rn~l~~------~~~~~~G~~y~~  464 (473)
T PLN02353        426 KTLDY--QKIYDNMQKPAFVFDGRNVLDH------EKLREIGFIVYS  464 (473)
T ss_pred             cccCH--HHHHHhccCCCEEEECCCCCCH------HHHHhCCcEEEE
Confidence            33211  3444455555689998887642      223345777766

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.56  E-value=0.009  Score=45.97  Aligned_cols=41  Identities=12%  Similarity=0.256  Sum_probs=32.4

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+..+.         .+++++|.+|||.+...
T Consensus       194 ~~l~~~~~~ADIvIsAvGk~~~i~---------~~~ik~gavVIDvGin~  234 (284)
T PRK14177        194 QNLPSIVRQADIIVGAVGKPEFIK---------ADWISEGAVLLDAGYNP  234 (284)
T ss_pred             CCHHHHHhhCCEEEEeCCCcCccC---------HHHcCCCCEEEEecCcc
Confidence            467788999999999998865322         35688999999999754

>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway

Probab=96.56  E-value=0.0068  Score=40.27  Aligned_cols=98  Identities=15%  Similarity=0.248  Sum_probs=59.5

Q ss_pred             CcHHHHHHHHhC----CCcEE-EEcCC--chhHHHHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKN----GHDVI-VYDKN--TDASQTLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~----g~~V~-~~~~~--~~~~~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||+.++..|.+.    +++|. +++|+  ..........+.....+++++++  ..|+||-|.+. +.....+      .
T Consensus         5 VG~~l~~~l~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvVE~t~~-~~~~~~~------~   77 (117)
T PF03447_consen    5 VGRGLLEQLKEQQERIDLEVVGVADRSMLISKDWAASFPDEAFTTDLEELIDDPDIDVVVECTSS-EAVAEYY------E   77 (117)
T ss_dssp             HHHHHHHHHHHTHHHCEEEEEEEEESSEEEETTHHHHHTHSCEESSHHHHHTHTT-SEEEE-SSC-HHHHHHH------H
T ss_pred             HHHHHHHHHHhCcccCCEEEEEEEECCchhhhhhhhhcccccccCCHHHHhcCcCCCEEEECCCc-hHHHHHH------H
Confidence            588999999877    45655 46888  11112222234566778999888  89999999765 4454443      4


Q ss_pred             ccCCCCcEEEeccCCCch---hHHHHHHHHHhcCCcE
Q psy755           72 KHAKPGVIVIDSSTVDPQ---VPQTLSNLAREKQITF  105 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~---~~~~~~~~~~~~g~~~  105 (183)
                      +.|..|..||-.+...-.   ....+.+..++.|.++
T Consensus        78 ~~L~~G~~VVt~nk~ala~~~~~~~L~~~A~~~g~~~  114 (117)
T PF03447_consen   78 KALERGKHVVTANKGALADEALYEELREAARKNGVRI  114 (117)
T ss_dssp             HHHHTTCEEEES-HHHHHSHHHHHHHHHHHHHHT-EE
T ss_pred             HHHHCCCeEEEECHHHhhhHHHHHHHHHHHHHcCCEE
Confidence            667899998876644333   3445555555556554

Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.55  E-value=0.008  Score=46.20  Aligned_cols=41  Identities=22%  Similarity=0.342  Sum_probs=32.1

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.+++.+..++         .+++++|.+|||.+...
T Consensus       191 ~~l~~~~~~ADIvI~AvG~p~~i~---------~~~vk~GavVIDvGin~  231 (282)
T PRK14169        191 RNLKQLTKEADILVVAVGVPHFIG---------ADAVKPGAVVIDVGISR  231 (282)
T ss_pred             CCHHHHHhhCCEEEEccCCcCccC---------HHHcCCCcEEEEeeccc
Confidence            467888999999999998866322         34688999999998643

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.55  E-value=0.0096  Score=45.81  Aligned_cols=41  Identities=27%  Similarity=0.298  Sum_probs=32.2

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+..++         .+++++|.+|||.+...
T Consensus       192 ~~l~~~~~~ADIvI~AvG~~~~i~---------~~~vk~GavVIDvGin~  232 (284)
T PRK14170        192 KDLPQVAKEADILVVATGLAKFVK---------KDYIKPGAIVIDVGMDR  232 (284)
T ss_pred             CCHHHHHhhCCEEEEecCCcCccC---------HHHcCCCCEEEEccCcc
Confidence            367888999999999998865322         34678999999998654

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.54  E-value=0.0082  Score=46.29  Aligned_cols=100  Identities=23%  Similarity=0.269  Sum_probs=67.3

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc----CC-cccCCHHHH--hccCCEEEEecCChHHHHHHhcCCccc--c
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKE----GA-NMALSLSTL--ASGAEFIISMLPASQDVLDAYDGSDGI--L   71 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~----g~-~~~~~~~~~--~~~adiVi~~vp~~~~~~~v~~~~~~l--~   71 (183)
                      +++++..|++.|. +|++++|+.++.+++.+.    +. .......+.  ..++|+||-++|.+..-...    ...  .
T Consensus       138 arAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~----~~~~~~  213 (283)
T COG0169         138 ARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEG----DSPVPA  213 (283)
T ss_pred             HHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCCCCCCCCCC----CCCCcH
Confidence            5788999999996 799999999998888764    21 111122221  22699999999986543210    101  3


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..++++.++.|+--....+  .+.++.+++|...++
T Consensus       214 ~~l~~~~~v~D~vY~P~~T--plL~~A~~~G~~~id  247 (283)
T COG0169         214 ELLPKGAIVYDVVYNPLET--PLLREARAQGAKTID  247 (283)
T ss_pred             HhcCcCCEEEEeccCCCCC--HHHHHHHHcCCeEEC
Confidence            4678899999988665555  355666777777666

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.54  E-value=0.0089  Score=46.30  Aligned_cols=41  Identities=17%  Similarity=0.325  Sum_probs=32.2

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.+++.+..++         .+++++|.+|||.+...
T Consensus       193 ~~l~~~~~~ADIvIsAvGkp~~i~---------~~~ik~gavVIDvGin~  233 (297)
T PRK14186        193 QDLASITREADILVAAAGRPNLIG---------AEMVKPGAVVVDVGIHR  233 (297)
T ss_pred             CCHHHHHhhCCEEEEccCCcCccC---------HHHcCCCCEEEEecccc
Confidence            467788999999999998865322         34688999999998654

>PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.51  E-value=0.039  Score=45.02  Aligned_cols=125  Identities=17%  Similarity=0.155  Sum_probs=68.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|.+.|++|+++|+++......................++|+||.+.+.+.. ...+      ......|..+
T Consensus        14 ~G~slA~~l~~~G~~V~g~D~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvV~s~gi~~~-~~~l------~~A~~~g~~v   86 (418)
T PRK00683         14 TGKSIARFLAQKGVYVIGVDKSLEALQSCPYIHERYLENAEEFPEQVDLVVRSPGIKKE-HPWV------QAAIASHIPV   86 (418)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCccccchhHHHhhhhcCCcHHHhcCCCEEEECCCCCCC-cHHH------HHHHHCCCcE
Confidence            58899999999999999999887644321100001122333444678988888755432 2221      2233344433


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEec--CCHHHHHHHHHHHHHhcCCeEEeCCcchH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVG--GDKSSLEKAKPILKCMGRNIVHCGDSGNG  156 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~g~~~~~~g~~g~a  156 (183)
                      +.-+       ........     +-+            .+..-++|  |...+.+.+..+|+..|......|+.|-.
T Consensus        87 v~~~-------~~~~~~~~-----~~~------------~~~I~ITGT~GKTTTt~ml~~iL~~~g~~~~~~GniG~p  140 (418)
T PRK00683         87 VTDI-------QLAFQTPE-----FTR------------YPSLGITGSTGKTTTILFLEHLLKRLGIPAFAMGNIGIP  140 (418)
T ss_pred             EEHH-------HHHHhhhh-----cCC------------CCEEEEECCCChHHHHHHHHHHHHHcCCCeEEECCcCHH
Confidence            3111       11111110     000            11122333  45566778899999988877778886644

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.50  E-value=0.0097  Score=45.89  Aligned_cols=41  Identities=15%  Similarity=0.317  Sum_probs=32.1

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+..+.         .+++++|.+|||.+...
T Consensus       190 ~~l~~~~~~ADIvIsAvGkp~~i~---------~~~vk~GavVIDVGin~  230 (287)
T PRK14173        190 QDLPAVTRRADVLVVAVGRPHLIT---------PEMVRPGAVVVDVGINR  230 (287)
T ss_pred             CCHHHHHhhCCEEEEecCCcCccC---------HHHcCCCCEEEEccCcc
Confidence            367888999999999998865322         34678999999998654

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=96.50  E-value=0.014  Score=45.53  Aligned_cols=54  Identities=17%  Similarity=0.222  Sum_probs=37.8

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHH----HHc----C----CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTL----AKE----G----ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~----~~~----g----~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      ||..+|..++..|+ +|+++|+++++.+..    ...    +    +....+. +.+++||+||+++.
T Consensus         9 vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~dADiVIit~g   75 (300)
T cd01339           9 VGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIAGSDVVVITAG   75 (300)
T ss_pred             HHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhCCCCEEEEecC
Confidence            68999999998877 999999998754311    111    1    1223344 45899999999884

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.48  E-value=0.0067  Score=47.18  Aligned_cols=96  Identities=20%  Similarity=0.311  Sum_probs=61.1

Q ss_pred             HHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHH---HHHhcC-----CccccccCC
Q psy755            4 HMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV---LDAYDG-----SDGILKHAK   75 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~---~~v~~~-----~~~l~~~l~   75 (183)
                      .+++.|.+.|++|+++.-+.+..+   ..|+...++.+++++++|+|+..+|....-   +..+..     .++....++
T Consensus        16 ~~~~~l~~~G~~v~~~g~~~~~~~---~~g~~~~~~~~~~~~~ad~ii~~~p~~~~~~~i~~~~~~~~~~~~~~~l~~l~   92 (296)
T PRK08306         16 ELIRKLVELGAKVSLVGFDQLDHG---FTGATKSSSLEEALSDVDVIILPVPGTNDEGNVDTVFSNEKLVLTEELLELTP   92 (296)
T ss_pred             HHHHHHHHCCCEEEEEeccccccc---cCCceeeccHHHHhccCCEEEECCccccCCceeeccccccCCcchHHHHHhcC
Confidence            478899999999999775543221   226677777888899999999998863211   111000     123456788


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++++++ .+...|..    .+.+.++|+..++
T Consensus        93 ~~~~v~-~G~~~~~~----~~~~~~~gi~~~~  119 (296)
T PRK08306         93 EHCTIF-SGIANPYL----KELAKETNRKLVE  119 (296)
T ss_pred             CCCEEE-EecCCHHH----HHHHHHCCCeEEE
Confidence            998655 34444442    2455678887766

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=96.48  E-value=0.01  Score=45.97  Aligned_cols=41  Identities=22%  Similarity=0.253  Sum_probs=31.7

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++++.+++||+||.++..+..++         .+++++|.+|||.+...
T Consensus       202 ~nl~~~~~~ADIvv~AvGk~~~i~---------~~~vk~gavVIDvGin~  242 (299)
T PLN02516        202 PDPESIVREADIVIAAAGQAMMIK---------GDWIKPGAAVIDVGTNA  242 (299)
T ss_pred             CCHHHHHhhCCEEEEcCCCcCccC---------HHHcCCCCEEEEeeccc
Confidence            467888999999999998753221         35688999999998644

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.47  E-value=0.0071  Score=46.43  Aligned_cols=66  Identities=20%  Similarity=0.270  Sum_probs=41.2

Q ss_pred             CCcEEEEcCCchhHHHH---H-HcCCc------ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEe
Q psy755           13 GHDVIVYDKNTDASQTL---A-KEGAN------MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVID   82 (183)
Q Consensus        13 g~~V~~~~~~~~~~~~~---~-~~g~~------~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid   82 (183)
                      |.+|++.+||......+   . ..+..      .+.++.+.+++||+||.+++.+.-    +   .  ...+++|.+|||
T Consensus       152 Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~Avgk~~l----v---~--~~~vk~GavVID  222 (279)
T PRK14178        152 GKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSAAGKAGF----I---T--PDMVKPGATVID  222 (279)
T ss_pred             CCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEECCCcccc----c---C--HHHcCCCcEEEE
Confidence            34666667665543331   1 22221      123577889999999999976532    2   1  234689999999


Q ss_pred             ccCCC
Q psy755           83 SSTVD   87 (183)
Q Consensus        83 ~s~~~   87 (183)
                      .+...
T Consensus       223 Vgi~~  227 (279)
T PRK14178        223 VGINQ  227 (279)
T ss_pred             eeccc
Confidence            99643

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.46  E-value=0.0091  Score=49.69  Aligned_cols=80  Identities=19%  Similarity=0.301  Sum_probs=57.0

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cC---------------C----------HHHHhccCCEEEEec
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--AL---------------S----------LSTLASGAEFIISML   54 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~---------------~----------~~~~~~~adiVi~~v   54 (183)
                      |...+..+...|..|+++|+++++.+.+...|...  .+               +          +.+.++++|+||.++
T Consensus       176 Gl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~e~~~~~DIVI~Ta  255 (511)
T TIGR00561       176 GLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFAAQAKEVDIIITTA  255 (511)
T ss_pred             HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHHHHHhCCCCEEEECc
Confidence            56667777888999999999999888877766432  00               0          334467899999998


Q ss_pred             -----CChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           55 -----PASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        55 -----p~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                           |.|    .++.  ++....+++|.+|+|.+...
T Consensus       256 lipG~~aP----~Lit--~emv~~MKpGsvIVDlA~d~  287 (511)
T TIGR00561       256 LIPGKPAP----KLIT--EEMVDSMKAGSVIVDLAAEQ  287 (511)
T ss_pred             ccCCCCCC----eeeh--HHHHhhCCCCCEEEEeeeCC
Confidence                 332    2221  55567889999999988643

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.44  E-value=0.01  Score=45.53  Aligned_cols=40  Identities=23%  Similarity=0.287  Sum_probs=31.4

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      .++.+.+++||+||.++..+..+.         .+++++|.+|||.+..
T Consensus       193 ~~l~~~~~~ADIvIsAvGkp~~i~---------~~~ik~gavVIDvGin  232 (278)
T PRK14172        193 KNLKEVCKKADILVVAIGRPKFID---------EEYVKEGAIVIDVGTS  232 (278)
T ss_pred             CCHHHHHhhCCEEEEcCCCcCccC---------HHHcCCCcEEEEeecc
Confidence            467888999999999998865322         3468899999999753

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.43  E-value=0.01  Score=45.78  Aligned_cols=40  Identities=23%  Similarity=0.341  Sum_probs=31.3

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      .++.+.+++||+||.++..+..+.         .+++++|.+|||++..
T Consensus       194 ~~L~~~~~~ADIvV~AvGkp~~i~---------~~~vk~GavVIDvGin  233 (288)
T PRK14171        194 HNLSSITSKADIVVAAIGSPLKLT---------AEYFNPESIVIDVGIN  233 (288)
T ss_pred             CCHHHHHhhCCEEEEccCCCCccC---------HHHcCCCCEEEEeecc
Confidence            467888999999999998765322         3467899999999853

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.43  E-value=0.0094  Score=45.89  Aligned_cols=41  Identities=22%  Similarity=0.309  Sum_probs=31.4

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+..+.         .+++++|.+|||.+...
T Consensus       193 ~~l~~~~~~ADIvI~AvG~p~~i~---------~~~ik~gavVIDvGi~~  233 (284)
T PRK14190        193 KNLAELTKQADILIVAVGKPKLIT---------ADMVKEGAVVIDVGVNR  233 (284)
T ss_pred             hhHHHHHHhCCEEEEecCCCCcCC---------HHHcCCCCEEEEeeccc
Confidence            367788999999999998765221         34678999999998543

>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases

Probab=96.41  E-value=0.014  Score=47.73  Aligned_cols=47  Identities=15%  Similarity=0.247  Sum_probs=36.2

Q ss_pred             HhCCCcEEEEcCCchhHHHHHHc------------CCcccCCHHHHhccCCEEEEecCC
Q psy755           10 LKNGHDVIVYDKNTDASQTLAKE------------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus        10 ~~~g~~V~~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ...|++|++||+++++.+.....            .+..++++.+++++||+||+++|.
T Consensus        26 ~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~~ttD~~eal~~AD~Vi~ai~~   84 (423)
T cd05297          26 ELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIEATTDRREALDGADFVINTIQV   84 (423)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHHhcCCCEEEEeeEe
Confidence            45578999999999887654331            133466788999999999999984

linked to 3D####ucture

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.41  E-value=0.011  Score=45.52  Aligned_cols=41  Identities=20%  Similarity=0.270  Sum_probs=31.8

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.+++.+..+.         .+.+++|.+|||.+...
T Consensus       193 ~dl~~~~k~ADIvIsAvGkp~~i~---------~~~vk~gavVIDvGin~  233 (282)
T PRK14180        193 TDLKSHTTKADILIVAVGKPNFIT---------ADMVKEGAVVIDVGINH  233 (282)
T ss_pred             CCHHHHhhhcCEEEEccCCcCcCC---------HHHcCCCcEEEEecccc
Confidence            467778999999999998865322         24678999999998543

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.41  E-value=0.011  Score=45.54  Aligned_cols=40  Identities=13%  Similarity=0.196  Sum_probs=31.0

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      .++.+.+++||+||.++..+..+.         .+.+++|.+|||.+..
T Consensus       199 ~~l~~~~~~ADIvv~AvG~p~~i~---------~~~vk~gavVIDvGin  238 (287)
T PRK14176        199 DDLKKYTLDADILVVATGVKHLIK---------ADMVKEGAVIFDVGIT  238 (287)
T ss_pred             CCHHHHHhhCCEEEEccCCccccC---------HHHcCCCcEEEEeccc
Confidence            467888999999999997765321         2367899999999864

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.40  E-value=0.011  Score=45.38  Aligned_cols=41  Identities=27%  Similarity=0.250  Sum_probs=32.0

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+..+.         .+.+++|.+|||.+...
T Consensus       192 ~nl~~~~~~ADIvIsAvGkp~~i~---------~~~vk~GavVIDvGin~  232 (282)
T PRK14166        192 KDLSLYTRQADLIIVAAGCVNLLR---------SDMVKEGVIVVDVGINR  232 (282)
T ss_pred             CCHHHHHhhCCEEEEcCCCcCccC---------HHHcCCCCEEEEecccc
Confidence            467888999999999998865332         34678999999998543

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=96.40  E-value=0.0035  Score=42.00  Aligned_cols=80  Identities=20%  Similarity=0.221  Sum_probs=48.2

Q ss_pred             CcHHHHHHHHhCCC-c-EEEEcCCchhHHHHHHc--------CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLKNGH-D-VIVYDKNTDASQTLAKE--------GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~-V~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      +|+.+.+.|.++-+ + +.++++++..-+.+...        .....+...+.+.++|+||+|+|.... ++..   .  
T Consensus        11 vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~~-~~~~---~--   84 (121)
T PF01118_consen   11 VGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGAS-KELA---P--   84 (121)
T ss_dssp             HHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHHH-HHHH---H--
T ss_pred             HHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhHH-HHHH---H--
Confidence            47888888888644 4 44566666322222221        112222233445899999999987544 3332   2  


Q ss_pred             cccCCCCcEEEeccCCC
Q psy755           71 LKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~   87 (183)
                       ..+.+|..|||.|+..
T Consensus        85 -~~~~~g~~ViD~s~~~  100 (121)
T PF01118_consen   85 -KLLKAGIKVIDLSGDF  100 (121)
T ss_dssp             -HHHHTTSEEEESSSTT
T ss_pred             -HHhhCCcEEEeCCHHH
Confidence             3367899999999865

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.36  E-value=0.012  Score=45.43  Aligned_cols=41  Identities=24%  Similarity=0.292  Sum_probs=31.9

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+..++         .+++++|.+|||.+...
T Consensus       195 ~~l~~~~~~ADIvVsAvGkp~~i~---------~~~ik~gaiVIDVGin~  235 (294)
T PRK14187        195 RDLADYCSKADILVAAVGIPNFVK---------YSWIKKGAIVIDVGINS  235 (294)
T ss_pred             CCHHHHHhhCCEEEEccCCcCccC---------HHHcCCCCEEEEecccc
Confidence            467888999999999998865322         34678999999998543

>KOG3007|consensus

Probab=96.35  E-value=0.008  Score=45.55  Aligned_cols=84  Identities=19%  Similarity=0.248  Sum_probs=62.4

Q ss_pred             cEEEEcCCchhHHHHHHc------C----CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEecc
Q psy755           15 DVIVYDKNTDASQTLAKE------G----ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSS   84 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~~------g----~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s   84 (183)
                      +|.+|+|+.+.++.+++.      .    ...+.+.++++..+|||+.|++...   .++|     ..++++|+.|=-.+
T Consensus       166 eVrIwnht~e~A~~la~~lsk~~~~iqie~~~~qsl~~aV~~sDIIs~atlste---Pilf-----gewlkpgthIdlVG  237 (333)
T KOG3007|consen  166 EVRIWNHTNEMALDLAKSLSKLFSNIQIELNQYQSLNGAVSNSDIISGATLSTE---PILF-----GEWLKPGTHIDLVG  237 (333)
T ss_pred             EEEeecCChHHHHHHHHHhhhcccceEEEEEehhhhhcccccCceEEeccccCC---ceee-----eeeecCCceEeeec
Confidence            799999999988777662      1    3456678889999999999998744   4454     35788998887777


Q ss_pred             CCCchhHHHHHHHHHhcCCcEEe
Q psy755           85 TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        85 ~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +..|...+.-.+..+ .+.-|+|
T Consensus       238 sf~p~mhEcDdelIq-~a~vfVD  259 (333)
T KOG3007|consen  238 SFKPVMHECDDELIQ-SACVFVD  259 (333)
T ss_pred             cCCchHHHHhHHHhh-hheEEEe
Confidence            778877665555554 5667777

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.32  E-value=0.02  Score=47.02  Aligned_cols=58  Identities=22%  Similarity=0.328  Sum_probs=43.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-cCCcc-------cCCHHHH-hccCCEEEEecCChH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-EGANM-------ALSLSTL-ASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~-------~~~~~~~-~~~adiVi~~vp~~~   58 (183)
                      +|..++..|.+.|++|+++|+++++.+.+.+ .+...       ...+.++ +.++|.|++++++..
T Consensus        11 ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~~   77 (453)
T PRK09496         11 VGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSDE   77 (453)
T ss_pred             HHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCChH
Confidence            5889999999999999999999999888865 33211       1123333 678999999998744

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.32  E-value=0.014  Score=44.92  Aligned_cols=41  Identities=22%  Similarity=0.299  Sum_probs=32.3

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+..++         .+++++|.+|||.+...
T Consensus       195 ~~l~~~~k~ADIvV~AvGkp~~i~---------~~~ik~GavVIDvGin~  235 (284)
T PRK14193        195 RDLAAHTRRADIIVAAAGVAHLVT---------ADMVKPGAAVLDVGVSR  235 (284)
T ss_pred             CCHHHHHHhCCEEEEecCCcCccC---------HHHcCCCCEEEEccccc
Confidence            467888999999999998865322         34688999999998644

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=96.29  E-value=0.033  Score=42.64  Aligned_cols=105  Identities=19%  Similarity=0.310  Sum_probs=64.2

Q ss_pred             CcHHHHHHHHh-CCCcEEE-EcCC-chhH----HHHHH---cCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLK-NGHDVIV-YDKN-TDAS----QTLAK---EGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~-~g~~V~~-~~~~-~~~~----~~~~~---~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      ||+.+++.+.+ .+++++. +||+ ++..    ..+..   .++..+++++++...+|+|+.++|+... ...+      
T Consensus        13 MG~~i~~~i~~~~~~elvav~d~~~~~~~~~~~~~~~~~~~~gv~~~~d~~~l~~~~DvVIdfT~p~~~-~~~~------   85 (266)
T TIGR00036        13 MGRELIKAALAAEGLQLVAAFERHGSSLQGTDAGELAGIGKVGVPVTDDLEAVETDPDVLIDFTTPEGV-LNHL------   85 (266)
T ss_pred             HHHHHHHHHHhCCCCEEEEEEecCCccccCCCHHHhcCcCcCCceeeCCHHHhcCCCCEEEECCChHHH-HHHH------
Confidence            78999999885 4677665 6854 3221    11111   2455667888875679999999976443 3332      


Q ss_pred             cccCCCCcEEEeccC-CCchhHHHHHHHHHhcCCcEEeecccC
Q psy755           71 LKHAKPGVIVIDSST-VDPQVPQTLSNLAREKQITFLDAPVSG  112 (183)
Q Consensus        71 ~~~l~~~~iiid~s~-~~~~~~~~~~~~~~~~g~~~~~~~~~~  112 (183)
                      ...+..|+.++-.++ ..+.....+.+..++.|..++-.|-+.
T Consensus        86 ~~al~~g~~vVigttg~~~e~~~~l~~aA~~~g~~v~~a~NfS  128 (266)
T TIGR00036        86 KFALEHGVRLVVGTTGFSEEDKQELADLAEKAGIAAVIAPNFS  128 (266)
T ss_pred             HHHHHCCCCEEEECCCCCHHHHHHHHHHHhcCCccEEEECccc
Confidence            355667776665444 444456666666666566666554443

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.27  E-value=0.011  Score=45.68  Aligned_cols=62  Identities=24%  Similarity=0.328  Sum_probs=45.6

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |++++..|.+.|.+|+++++..              .++.+.++++|+||.+++.+..    +   +  .+.+++|.+++
T Consensus       172 Gkpia~~L~~~gatVtv~~~~t--------------~~L~~~~~~aDIvI~AtG~~~~----v---~--~~~lk~gavVi  228 (283)
T PRK14192        172 GKPMAMMLLNANATVTICHSRT--------------QNLPELVKQADIIVGAVGKPEL----I---K--KDWIKQGAVVV  228 (283)
T ss_pred             HHHHHHHHHhCCCEEEEEeCCc--------------hhHHHHhccCCEEEEccCCCCc----C---C--HHHcCCCCEEE
Confidence            6788888888888888887622              2456667899999999975442    2   1  24578999999


Q ss_pred             eccCC
Q psy755           82 DSSTV   86 (183)
Q Consensus        82 d~s~~   86 (183)
                      |....
T Consensus       229 Dvg~n  233 (283)
T PRK14192        229 DAGFH  233 (283)
T ss_pred             EEEEe
Confidence            98854

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.26  E-value=0.016  Score=44.62  Aligned_cols=41  Identities=20%  Similarity=0.235  Sum_probs=31.5

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.+++.+..+.         .+++++|.+|||.+...
T Consensus       192 ~nl~~~~~~ADIvI~AvGk~~~i~---------~~~ik~gaiVIDvGin~  232 (282)
T PRK14182        192 ADLAGEVGRADILVAAIGKAELVK---------GAWVKEGAVVIDVGMNR  232 (282)
T ss_pred             CCHHHHHhhCCEEEEecCCcCccC---------HHHcCCCCEEEEeecee
Confidence            467788899999999998754322         34688999999998543

>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=96.24  E-value=0.015  Score=46.17  Aligned_cols=40  Identities=28%  Similarity=0.312  Sum_probs=31.7

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      .++.+.+++||+||.++..+..++         .+++++|.+|||.+..
T Consensus       266 ~nl~~~~r~ADIVIsAvGkp~~i~---------~d~vK~GAvVIDVGIn  305 (364)
T PLN02616        266 KNPEEITREADIIISAVGQPNMVR---------GSWIKPGAVVIDVGIN  305 (364)
T ss_pred             CCHHHHHhhCCEEEEcCCCcCcCC---------HHHcCCCCEEEecccc
Confidence            467888999999999998865322         3468899999998854

>COG4074 Mth H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [Energy production and conversion]

Probab=96.23  E-value=0.094  Score=38.85  Aligned_cols=104  Identities=13%  Similarity=0.198  Sum_probs=65.5

Q ss_pred             CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-eccc
Q psy755           33 GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVS  111 (183)
Q Consensus        33 g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~  111 (183)
                      |+..+++..+++.++|+|+.=.|.+..-..++   +.+.+.+++|.++.+.++........+-+...+...+..+ +|  
T Consensus       126 g~~vttddreavedad~iitwlpkg~~qpdii---kkfiddipegaivthactipttkf~kifed~gredlnvtsyhp--  200 (343)
T COG4074         126 GIVVTTDDREAVEDADMIITWLPKGGVQPDII---KKFIDDIPEGAIVTHACTIPTTKFKKIFEDMGREDLNVTSYHP--  200 (343)
T ss_pred             eeEEecCcHhhhcCCCeEEEeccCCCCCccHH---HHHHhcCCCCceEeeecccchHHHHHHHHHhCccccceeccCC--
Confidence            46667788888999999999999876556666   7778889999999999887655544444333322222222 11  


Q ss_pred             CCHHHHhcCceEEEec--CCHHHHHHHHHHHHHh
Q psy755          112 GGTKAAQEATLTFMVG--GDKSSLEKAKPILKCM  143 (183)
Q Consensus       112 ~~~~~~~~~~~~~~~~--g~~~~~~~~~~l~~~~  143 (183)
                       +..+--.|. +++..  .++++++.+.++=+..
T Consensus       201 -g~vpemkgq-vyiaegyaseeavn~lyelg~ka  232 (343)
T COG4074         201 -GTVPEMKGQ-VYIAEGYASEEAVNALYELGEKA  232 (343)
T ss_pred             -CCCccccCc-EEEecccccHHHHHHHHHHHHHh
Confidence             111122344 33433  3777777766665554

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.22  E-value=0.016  Score=44.47  Aligned_cols=41  Identities=22%  Similarity=0.211  Sum_probs=31.8

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+.-++         .+++++|.+|||.+...
T Consensus       192 ~~l~~~~~~ADIvV~AvGkp~~i~---------~~~vk~gavvIDvGin~  232 (281)
T PRK14183        192 KDLKAHTKKADIVIVGVGKPNLIT---------EDMVKEGAIVIDIGINR  232 (281)
T ss_pred             cCHHHHHhhCCEEEEecCcccccC---------HHHcCCCcEEEEeeccc
Confidence            467788999999999998765322         34678999999998543

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.19  E-value=0.029  Score=43.12  Aligned_cols=100  Identities=18%  Similarity=0.224  Sum_probs=63.4

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHH-HHHhcCCccc-cccCCCC
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDV-LDAYDGSDGI-LKHAKPG   77 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~-~~v~~~~~~l-~~~l~~~   77 (183)
                      +++++..|++.|. +|++++|++++.+.+.+. +......+  ....+|+||-|+|.+..- ...-  ..-+ ...++++
T Consensus       134 arAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~~~~~--~~~~~dlvINaTp~Gm~~~~~~~--~~pi~~~~l~~~  209 (272)
T PRK12550        134 AKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEWRPDL--GGIEADILVNVTPIGMAGGPEAD--KLAFPEAEIDAA  209 (272)
T ss_pred             HHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcchhhc--ccccCCEEEECCccccCCCCccc--cCCCCHHHcCCC
Confidence            5788888999997 699999999998887654 21111111  124689999999865320 0000  0001 2346778


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .++.|..-....+  .+.+..+++|...++
T Consensus       210 ~~v~D~vY~P~~T--~ll~~A~~~G~~~i~  237 (272)
T PRK12550        210 SVVFDVVALPAET--PLIRYARARGKTVIT  237 (272)
T ss_pred             CEEEEeecCCccC--HHHHHHHHCcCeEeC
Confidence            8999988655544  355566677877766

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.19  E-value=0.032  Score=41.68  Aligned_cols=97  Identities=22%  Similarity=0.271  Sum_probs=60.3

Q ss_pred             CcHHHHHHHHhCCCc---EEEEcCC----chhH-------HHHHHc-CC-cccCCHHHHhccCCEEEEecCChHHHHHHh
Q psy755            1 MGSHMARNLLKNGHD---VIVYDKN----TDAS-------QTLAKE-GA-NMALSLSTLASGAEFIISMLPASQDVLDAY   64 (183)
Q Consensus         1 mG~~iA~~l~~~g~~---V~~~~~~----~~~~-------~~~~~~-g~-~~~~~~~~~~~~adiVi~~vp~~~~~~~v~   64 (183)
                      +|++++..|.+.|.+   |+++||+    .++.       +.+.+. +. ....++.+.++++|+||-++|.+...+.. 
T Consensus        36 Ag~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~~~l~~~l~~~dvlIgaT~~G~~~~~~-  114 (226)
T cd05311          36 AGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTGGTLKEALKGADVFIGVSRPGVVKKEM-  114 (226)
T ss_pred             HHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcccCCHHHHHhcCCEEEeCCCCCCCCHHH-
Confidence            478899999999974   9999999    4442       222222 11 11136767888999999999854322223 


Q ss_pred             cCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCc-EEe
Q psy755           65 DGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQIT-FLD  107 (183)
Q Consensus        65 ~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~-~~~  107 (183)
                            ...+.++.+|.+.++-.+.   ...+...+.|.. +.+
T Consensus       115 ------l~~m~~~~ivf~lsnP~~e---~~~~~A~~~ga~i~a~  149 (226)
T cd05311         115 ------IKKMAKDPIVFALANPVPE---IWPEEAKEAGADIVAT  149 (226)
T ss_pred             ------HHhhCCCCEEEEeCCCCCc---CCHHHHHHcCCcEEEe
Confidence                  2344577888888844432   344445555665 444

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.17  E-value=0.0099  Score=46.43  Aligned_cols=57  Identities=18%  Similarity=0.292  Sum_probs=41.3

Q ss_pred             CcHHHHHHHHhCC--CcEEEEcCCchhHHHHHHc--------C--CcccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNG--HDVIVYDKNTDASQTLAKE--------G--ANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g--~~V~~~~~~~~~~~~~~~~--------g--~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|.++|..|+..|  ++|+++|+++++++.....        +  ........+.+++||+||+++..+
T Consensus        11 vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~~   79 (306)
T cd05291          11 VGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGAP   79 (306)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCCC
Confidence            4889999999999  5899999999887654432        1  112223334578999999999764

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.17  E-value=0.012  Score=45.27  Aligned_cols=40  Identities=18%  Similarity=0.203  Sum_probs=30.5

Q ss_pred             CHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           39 SLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        39 ~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      ++.+.+++||+||.+++.+.-+.         .+++++|.+|+|.+...
T Consensus       193 ~l~~~~~~ADIvV~AvG~p~~i~---------~~~vk~GavVIDvGi~~  232 (285)
T PRK14191        193 DLSFYTQNADIVCVGVGKPDLIK---------ASMVKKGAVVVDIGINR  232 (285)
T ss_pred             HHHHHHHhCCEEEEecCCCCcCC---------HHHcCCCcEEEEeeccc
Confidence            46678899999999998765322         24678999999998543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.16  E-value=0.013  Score=41.78  Aligned_cols=54  Identities=22%  Similarity=0.376  Sum_probs=42.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCC-------cccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA-------NMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|..+++.|.+.|++|++..|++++.+.  ..++       ...++..++++++|.||.+++.
T Consensus        10 vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen   10 VGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             HHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             HHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            4889999999999999999999998877  3332       1112345667899999999974

...

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=96.16  E-value=0.019  Score=45.34  Aligned_cols=40  Identities=25%  Similarity=0.293  Sum_probs=31.7

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      .++.+.+++||+||.++..+..+.         .+++++|.+|||.+..
T Consensus       249 ~nl~~~~~~ADIvIsAvGkp~~v~---------~d~vk~GavVIDVGin  288 (345)
T PLN02897        249 KDPEQITRKADIVIAAAGIPNLVR---------GSWLKPGAVVIDVGTT  288 (345)
T ss_pred             CCHHHHHhhCCEEEEccCCcCccC---------HHHcCCCCEEEEcccc
Confidence            467888999999999998865322         3468899999999864

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=96.16  E-value=0.041  Score=42.12  Aligned_cols=106  Identities=16%  Similarity=0.129  Sum_probs=62.2

Q ss_pred             CcHHHHHHHHhC-CCcEEE-EcCCc--hhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKN-GHDVIV-YDKNT--DASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~-~~~~~--~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||+.+++.+.+. +.++.. ++++.  ++.......+...+++.+++..+.|+|+.|+|.....+..       ...+..
T Consensus        12 iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~DvVve~t~~~~~~e~~-------~~aL~a   84 (265)
T PRK13303         12 IGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEAVRVVSSVDALPQRPDLVVECAGHAALKEHV-------VPILKA   84 (265)
T ss_pred             HHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccCCeeeCCHHHhccCCCEEEECCCHHHHHHHH-------HHHHHc
Confidence            688888888765 455543 44432  2222222225566777877745699999999875443322       345678


Q ss_pred             CcEEEeccCC---CchhHHHHHHHHHhcCCc-EEeecccCC
Q psy755           77 GVIVIDSSTV---DPQVPQTLSNLAREKQIT-FLDAPVSGG  113 (183)
Q Consensus        77 ~~iiid~s~~---~~~~~~~~~~~~~~~g~~-~~~~~~~~~  113 (183)
                      |+.++..+..   .+.....+.+..++.|.. ++.....++
T Consensus        85 Gk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~v~sga~gg  125 (265)
T PRK13303         85 GIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAIGG  125 (265)
T ss_pred             CCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEEEeChHhhC
Confidence            8877765543   233345666667676754 343333343

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.07  E-value=0.022  Score=43.96  Aligned_cols=41  Identities=15%  Similarity=0.199  Sum_probs=32.0

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.+++.+..++         .+++++|.+|||.+...
T Consensus       192 ~~l~~~~~~ADIvV~AvG~p~~i~---------~~~ik~GavVIDvGin~  232 (287)
T PRK14181        192 ENLTEILKTADIIIAAIGVPLFIK---------EEMIAEKAVIVDVGTSR  232 (287)
T ss_pred             CCHHHHHhhCCEEEEccCCcCccC---------HHHcCCCCEEEEecccc
Confidence            467888999999999998765322         35688999999998543

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.04  E-value=0.011  Score=41.98  Aligned_cols=83  Identities=20%  Similarity=0.272  Sum_probs=53.5

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc---c-----------------------cCCHHHHhccCCEEEEecC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN---M-----------------------ALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~---~-----------------------~~~~~~~~~~adiVi~~vp   55 (183)
                      |..-+..+.+.|++|+.+|.++++.+.....+..   .                       ...+.+.++.+|+||.+.-
T Consensus        32 g~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~~d~vI~~~~  111 (168)
T PF01262_consen   32 GQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAEFIAPADIVIGNGL  111 (168)
T ss_dssp             HHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHHHHHH-SEEEEHHH
T ss_pred             HHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHHHHhhCcEEeeecc
Confidence            4566777888999999999999887776654321   1                       1123456778999997542


Q ss_pred             -ChHHHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           56 -ASQDVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        56 -~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                       +......++.  ++....++++.+|+|.|..
T Consensus       112 ~~~~~~P~lvt--~~~~~~m~~gsvIvDis~D  141 (168)
T PF01262_consen  112 YWGKRAPRLVT--EEMVKSMKPGSVIVDISCD  141 (168)
T ss_dssp             BTTSS---SBE--HHHHHTSSTTEEEEETTGG
T ss_pred             cCCCCCCEEEE--hHHhhccCCCceEEEEEec
Confidence             2233444442  6666778899999999853

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.01  E-value=0.029  Score=44.16  Aligned_cols=82  Identities=16%  Similarity=0.197  Sum_probs=48.9

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-----CC---cc-cCCHHHH-hccCCEEEEecCChHHHHHHhcCCccc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-----GA---NM-ALSLSTL-ASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-----g~---~~-~~~~~~~-~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      |..|.+.|..+.+ ++..++.+..+-+.+.+.     |.   .. ..+.++. .++||+||+|+|.+...+-+    .  
T Consensus        15 G~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~~~~~~DvvFlalPhg~s~~~v----~--   88 (349)
T COG0002          15 GLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKIELDECDVVFLALPHGVSAELV----P--   88 (349)
T ss_pred             HHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhhhcccCCEEEEecCchhHHHHH----H--
Confidence            6678888887754 766665443222222221     11   11 1123332 45699999999998765554    2  


Q ss_pred             cccCCCCcEEEeccCCCchh
Q psy755           71 LKHAKPGVIVIDSSTVDPQV   90 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~~   90 (183)
                       ..+.+|..|||+|+...-.
T Consensus        89 -~l~~~g~~VIDLSadfR~~  107 (349)
T COG0002          89 -ELLEAGCKVIDLSADFRLK  107 (349)
T ss_pred             -HHHhCCCeEEECCcccccC
Confidence             3445677799999876554

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.99  E-value=0.02  Score=35.91  Aligned_cols=52  Identities=27%  Similarity=0.537  Sum_probs=36.9

Q ss_pred             CcHHHHHHHHhC-CCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKN-GHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +|..++..|.+. +.+|++|||                          |++|.+++.+..+..      +....+.++.+
T Consensus        34 ~g~~~a~~l~~~~~~~v~v~~r--------------------------di~i~~~~~~~~~~~------~~~~~~~~~~~   81 (86)
T cd05191          34 VGKGIAKLLADEGGKKVVLCDR--------------------------DILVTATPAGVPVLE------EATAKINEGAV   81 (86)
T ss_pred             HHHHHHHHHHHcCCCEEEEEcC--------------------------CEEEEcCCCCCCchH------HHHHhcCCCCE
Confidence            467778888877 457888887                          999999987665433      11235677888


Q ss_pred             EEecc
Q psy755           80 VIDSS   84 (183)
Q Consensus        80 iid~s   84 (183)
                      |+|++
T Consensus        82 v~~~a   86 (86)
T cd05191          82 VIDLA   86 (86)
T ss_pred             EEecC
Confidence            88863

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.87  E-value=0.05  Score=42.83  Aligned_cols=53  Identities=21%  Similarity=0.237  Sum_probs=37.7

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHH--------cC----CcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAK--------EG----ANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~--------~g----~~~~~~~~~~~~~adiVi~~v   54 (183)
                      ||.+++..++..| .++++||+++++.+...-        .+    +...++.+ .+++||+||++.
T Consensus        16 vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVita   81 (319)
T PTZ00117         16 IGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITA   81 (319)
T ss_pred             HHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECC
Confidence            6889999999888 589999999876432111        01    12234555 679999999999

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.79  E-value=0.053  Score=42.07  Aligned_cols=101  Identities=10%  Similarity=0.171  Sum_probs=61.6

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCch---hHHHHHHc-C----C-cccCCH------HHHhccCCEEEEecCChHHH--HHH
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTD---ASQTLAKE-G----A-NMALSL------STLASGAEFIISMLPASQDV--LDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~---~~~~~~~~-g----~-~~~~~~------~~~~~~adiVi~~vp~~~~~--~~v   63 (183)
                      +++++..|+..|. +|++++|+++   +.+.+.+. +    . ....+.      .+.+.++|+||-++|.+..-  ...
T Consensus       136 arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivINaTp~Gm~~~~~~~  215 (288)
T PRK12749        136 STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENES  215 (288)
T ss_pred             HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEECCCCCCCCCCCCC
Confidence            5677788888887 8999999964   66655442 1    1 111122      23456799999999875421  000


Q ss_pred             hcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           64 YDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        64 ~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .   ..-...++++.++.|+--....+  .+.+..+++|.+.++
T Consensus       216 ~---~~~~~~l~~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~  254 (288)
T PRK12749        216 L---VNDISLLHPGLLVTECVYNPHMT--KLLQQAQQAGCKTID  254 (288)
T ss_pred             C---CCcHHHCCCCCEEEEecCCCccC--HHHHHHHHCCCeEEC
Confidence            0   00012466788899988544443  455666777887777

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.79  E-value=0.028  Score=44.77  Aligned_cols=82  Identities=22%  Similarity=0.286  Sum_probs=49.3

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHH-c----CC---ccc-CCHHHHhccCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAK-E----GA---NMA-LSLSTLASGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~-~----g~---~~~-~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      +|..+.+.|.++ +++++ ++++.+..-+.+.. .    +.   ... .+..++.+++|+||+|+|.....+-+    ..
T Consensus        12 vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~~s~~~~----~~   87 (346)
T TIGR01850        12 TGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHGVSAELA----PE   87 (346)
T ss_pred             HHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCchHHHHHH----HH
Confidence            477888888876 55777 54544322222221 1    11   111 14456656899999999986543333    32


Q ss_pred             ccccCCCCcEEEeccCCCch
Q psy755           70 ILKHAKPGVIVIDSSTVDPQ   89 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~   89 (183)
                         ....|+.|||.|+...-
T Consensus        88 ---~~~~G~~VIDlS~~fR~  104 (346)
T TIGR01850        88 ---LLAAGVKVIDLSADFRL  104 (346)
T ss_pred             ---HHhCCCEEEeCChhhhc
Confidence               23578999999987543

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=95.76  E-value=0.029  Score=44.63  Aligned_cols=81  Identities=23%  Similarity=0.299  Sum_probs=48.0

Q ss_pred             CcHHHHHHHHhC-CCcEEE-EcCCchhHHHHHHc-----CC--cccCCHH-HHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLKN-GHDVIV-YDKNTDASQTLAKE-----GA--NMALSLS-TLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~-~~~~~~~~~~~~~~-----g~--~~~~~~~-~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      +|..+++.|.++ +++++. .++.+ ..+.+.+.     +.  ...++.. ...+++|+||+|+|...+.+-+    .. 
T Consensus        14 vG~~l~~~L~~~p~~elv~v~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~vD~Vf~alP~~~~~~~v----~~-   87 (343)
T PRK00436         14 TGGELLRLLLNHPEVEIVAVTSRSS-AGKPLSDVHPHLRGLVDLVLEPLDPEILAGADVVFLALPHGVSMDLA----PQ-   87 (343)
T ss_pred             HHHHHHHHHHcCCCceEEEEECccc-cCcchHHhCcccccccCceeecCCHHHhcCCCEEEECCCcHHHHHHH----HH-
Confidence            467788888876 567655 45432 22222211     11  0122222 2456899999999997654444    22 


Q ss_pred             cccCCCCcEEEeccCCCch
Q psy755           71 LKHAKPGVIVIDSSTVDPQ   89 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~   89 (183)
                        .+..|+.|||.|+...-
T Consensus        88 --a~~aG~~VID~S~~fR~  104 (343)
T PRK00436         88 --LLEAGVKVIDLSADFRL  104 (343)
T ss_pred             --HHhCCCEEEECCcccCC
Confidence              34579999999987654

>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]

Probab=95.76  E-value=0.036  Score=42.45  Aligned_cols=41  Identities=20%  Similarity=0.363  Sum_probs=31.9

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.++++|+|+.++-.+..++         .+++++|.++||.+...
T Consensus       191 ~~l~~~~k~ADIvv~AvG~p~~i~---------~d~vk~gavVIDVGinr  231 (283)
T COG0190         191 KDLASITKNADIVVVAVGKPHFIK---------ADMVKPGAVVIDVGINR  231 (283)
T ss_pred             CCHHHHhhhCCEEEEecCCccccc---------cccccCCCEEEecCCcc
Confidence            467788899999999997755332         35788999999988643

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=95.76  E-value=0.034  Score=44.60  Aligned_cols=75  Identities=17%  Similarity=0.251  Sum_probs=53.6

Q ss_pred             HHHHHHHhCCCcEEEEcCCchhHHHHHHc--CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            4 HMARNLLKNGHDVIVYDKNTDASQTLAKE--GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      .++..|.+.|.+|.+||....  +.....  ++...++..+++++||++++++.+ ++++.+=+  +.+   +.++..|+
T Consensus       334 ~vi~~L~~~Ga~V~aYDP~a~--~~~~~~~~~~~~~~~~~~~~~~aDaivi~tew-~ef~~~d~--~~~---~m~~~~v~  405 (414)
T COG1004         334 DIIKRLQEKGAEVIAYDPVAM--ENAFRNFPDVELESDAEEALKGADAIVINTEW-DEFRDLDF--EKL---LMKTPVVI  405 (414)
T ss_pred             HHHHHHHHCCCEEEEECchhh--HHHHhcCCCceEeCCHHHHHhhCCEEEEeccH-HHHhccCh--hhh---hccCCEEE
Confidence            577889999999999995443  333322  467888999999999999999977 44555421  122   55778888


Q ss_pred             eccCC
Q psy755           82 DSSTV   86 (183)
Q Consensus        82 d~s~~   86 (183)
                      |.-+.
T Consensus       406 DgRni  410 (414)
T COG1004         406 DGRNI  410 (414)
T ss_pred             ecccc
Confidence            86554

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.75  E-value=0.037  Score=42.87  Aligned_cols=41  Identities=29%  Similarity=0.308  Sum_probs=32.2

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+..+.         .+++++|.+|||.+...
T Consensus       196 ~nl~~~~~~ADIvIsAvGkp~~i~---------~~~vk~gavVIDvGin~  236 (293)
T PRK14185        196 KNLKKECLEADIIIAALGQPEFVK---------ADMVKEGAVVIDVGTTR  236 (293)
T ss_pred             CCHHHHHhhCCEEEEccCCcCccC---------HHHcCCCCEEEEecCcc
Confidence            467888999999999998865322         35688999999998643

>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.74  E-value=0.04  Score=42.74  Aligned_cols=40  Identities=25%  Similarity=0.268  Sum_probs=31.2

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      .++.+.+++||+||.++..+..++         .+++++|.+|||.+..
T Consensus       200 ~~l~~~~~~ADIvVsAvGkp~~i~---------~~~ik~gavVIDvGin  239 (297)
T PRK14168        200 KNLARHCQRADILIVAAGVPNLVK---------PEWIKPGATVIDVGVN  239 (297)
T ss_pred             cCHHHHHhhCCEEEEecCCcCccC---------HHHcCCCCEEEecCCC
Confidence            367788999999999997765322         3468899999999854

>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]

Probab=95.69  E-value=0.029  Score=44.38  Aligned_cols=79  Identities=19%  Similarity=0.276  Sum_probs=59.8

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.+|.++...|.+|.+++.+|-++-.+.=.|.... ...+++..+|++|.++-..    .++.  .+-...++.|.++.
T Consensus       221 GrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~-~m~~Aa~~gDifiT~TGnk----dVi~--~eh~~~MkDgaIl~  293 (420)
T COG0499         221 GRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVM-TMEEAAKTGDIFVTATGNK----DVIR--KEHFEKMKDGAILA  293 (420)
T ss_pred             chHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEE-EhHHhhhcCCEEEEccCCc----CccC--HHHHHhccCCeEEe
Confidence            889999999999999999999977655554565544 7888999999999999652    3331  33345678888888


Q ss_pred             eccCCC
Q psy755           82 DSSTVD   87 (183)
Q Consensus        82 d~s~~~   87 (183)
                      +.+--.
T Consensus       294 N~GHFd  299 (420)
T COG0499         294 NAGHFD  299 (420)
T ss_pred             cccccc
Confidence            777543

>KOG1200|consensus

Probab=95.65  E-value=0.081  Score=38.55  Aligned_cols=75  Identities=20%  Similarity=0.318  Sum_probs=51.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||++++..|+++|++|.+.|++...++..... +..    -....-.||     |.+..+++..+   ++..+.+....+
T Consensus        26 IGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~----~~h~aF~~D-----VS~a~~v~~~l---~e~~k~~g~psv   93 (256)
T KOG1200|consen   26 IGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY----GDHSAFSCD-----VSKAHDVQNTL---EEMEKSLGTPSV   93 (256)
T ss_pred             HHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC----Cccceeeec-----cCcHHHHHHHH---HHHHHhcCCCcE
Confidence            68999999999999999999888866655443 211    011122344     34556677766   677777777778


Q ss_pred             EEeccCCC
Q psy755           80 VIDSSTVD   87 (183)
Q Consensus        80 iid~s~~~   87 (183)
                      +++|....
T Consensus        94 lVncAGIt  101 (256)
T KOG1200|consen   94 LVNCAGIT  101 (256)
T ss_pred             EEEcCccc
Confidence            88877653

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=95.64  E-value=0.021  Score=38.35  Aligned_cols=79  Identities=18%  Similarity=0.262  Sum_probs=52.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-----cCCHHH----Hhc--cCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-----ALSLST----LAS--GAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~----~~~--~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      +|...++.++..|.+|++.++++++.+.+.+.|...     ..+..+    ...  ..|+||.|+..+..++..+     
T Consensus         2 vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~-----   76 (130)
T PF00107_consen    2 VGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI-----   76 (130)
T ss_dssp             HHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH-----
T ss_pred             hHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHH-----
Confidence            366667777788999999999999999998887421     112222    222  4889999987655555543     


Q ss_pred             ccccCCCCcEEEeccCC
Q psy755           70 ILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~   86 (183)
                        ..++++..++..+..
T Consensus        77 --~~l~~~G~~v~vg~~   91 (130)
T PF00107_consen   77 --KLLRPGGRIVVVGVY   91 (130)
T ss_dssp             --HHEEEEEEEEEESST
T ss_pred             --HHhccCCEEEEEEcc
Confidence              455666665555543

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.56  E-value=0.029  Score=43.90  Aligned_cols=56  Identities=21%  Similarity=0.275  Sum_probs=39.8

Q ss_pred             CcHHHHHHHHhCC--CcEEEEcCCchhHHH-HHHc-C-------Cc-ccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNG--HDVIVYDKNTDASQT-LAKE-G-------AN-MALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g--~~V~~~~~~~~~~~~-~~~~-g-------~~-~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|.++|..|+..|  .+|+++|+++++.+. +... .       .. ...+. +.+++||+||++.+.+
T Consensus        11 VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~-~~l~~aDiViita~~~   78 (308)
T cd05292          11 VGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDY-ADCKGADVVVITAGAN   78 (308)
T ss_pred             HHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCH-HHhCCCCEEEEccCCC
Confidence            4889999999999  589999999987653 2111 1       11 12333 5689999999999864

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.56  E-value=0.027  Score=47.04  Aligned_cols=82  Identities=16%  Similarity=0.199  Sum_probs=54.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc--C-----------------CH--------HHHhccCCEEEEec
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA--L-----------------SL--------STLASGAEFIISML   54 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~-----------------~~--------~~~~~~adiVi~~v   54 (183)
                      |...+..+...|.+|+++|+++++.+.+.+.|....  +                 +.        .+.++.+|+||.|+
T Consensus       177 GL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIeta  256 (509)
T PRK09424        177 GLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTA  256 (509)
T ss_pred             HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECC
Confidence            455556667789999999999999999888876521  1                 10        11124699999999


Q ss_pred             CChHH--HHHHhcCCccccccCCCCcEEEeccCC
Q psy755           55 PASQD--VLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        55 p~~~~--~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      ..+..  -.-+.   ++....+++|..|+|.+..
T Consensus       257 g~pg~~aP~lit---~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        257 LIPGKPAPKLIT---AEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             CCCcccCcchHH---HHHHHhcCCCCEEEEEccC
Confidence            64321  11111   3445678899999998763

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.55  E-value=0.033  Score=42.94  Aligned_cols=40  Identities=23%  Similarity=0.357  Sum_probs=30.6

Q ss_pred             CHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           39 SLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        39 ~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      ++.+.+++||+||.+++.+.-+.         .+++++|.+|||.+...
T Consensus       197 ~l~~~~~~ADIVI~AvG~p~li~---------~~~vk~GavVIDVGi~~  236 (286)
T PRK14184        197 DLAEECREADFLFVAIGRPRFVT---------ADMVKPGAVVVDVGINR  236 (286)
T ss_pred             hHHHHHHhCCEEEEecCCCCcCC---------HHHcCCCCEEEEeeeec
Confidence            57788999999999997755322         24568999999998543

>PRK13301 putative L-aspartate dehydrogenase; Provisional

Probab=95.53  E-value=0.17  Score=38.64  Aligned_cols=94  Identities=17%  Similarity=0.162  Sum_probs=59.7

Q ss_pred             CcHHHHHHHHhCC---CcE-EEEcCCchhHHHHHHcCCcccCCHHHH-hccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNG---HDV-IVYDKNTDASQTLAKEGANMALSLSTL-ASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g---~~V-~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||..++..|.+.+   +++ .+|+|++++.+++.+. ...+++++++ ...+|+|+.|-.. +.+++..      .+.|.
T Consensus        13 IG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~-~~~~~~l~~ll~~~~DlVVE~A~~-~av~e~~------~~iL~   84 (267)
T PRK13301         13 IASDVAAGLLADAAQPCQLAALTRNAADLPPALAGR-VALLDGLPGLLAWRPDLVVEAAGQ-QAIAEHA------EGCLT   84 (267)
T ss_pred             HHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhcc-CcccCCHHHHhhcCCCEEEECCCH-HHHHHHH------HHHHh
Confidence            5777888776532   454 4578998887777654 6677889996 6889999999965 5555543      34566


Q ss_pred             CCcEEEeccCCCc---hhHHHHHHHHHhcC
Q psy755           76 PGVIVIDSSTVDP---QVPQTLSNLAREKQ  102 (183)
Q Consensus        76 ~~~iiid~s~~~~---~~~~~~~~~~~~~g  102 (183)
                      .|.-++-.|...-   ...+.+.+..++.|
T Consensus        85 ~g~dlvv~SvGALaD~~~~~~l~~~A~~~g  114 (267)
T PRK13301         85 AGLDMIICSAGALADDALRARLIAAAEAGG  114 (267)
T ss_pred             cCCCEEEEChhHhcCHHHHHHHHHHHHhCC
Confidence            6665555553322   23344444444444

>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.49  E-value=0.041  Score=42.68  Aligned_cols=40  Identities=20%  Similarity=0.380  Sum_probs=30.2

Q ss_pred             CHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           39 SLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        39 ~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      ++.+.+++||+||.+++.+.    ++   .  .+++++|.+|||.+...
T Consensus       199 ~l~~~~~~ADIvI~Avg~~~----li---~--~~~vk~GavVIDVgi~~  238 (295)
T PRK14174        199 DIPSYTRQADILIAAIGKAR----FI---T--ADMVKPGAVVIDVGINR  238 (295)
T ss_pred             hHHHHHHhCCEEEEecCccC----cc---C--HHHcCCCCEEEEeeccc
Confidence            56788999999999997653    22   1  34568999999998543

>PF05222 AlaDh_PNT_N: Alanine dehydrogenase/PNT, N-terminal domain; InterPro: IPR007886 Alanine dehydrogenases (1

Probab=95.40  E-value=0.33  Score=33.26  Aligned_cols=95  Identities=23%  Similarity=0.303  Sum_probs=61.5

Q ss_pred             HHHHHHhCCCcEEEEcCCchh----HHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            5 MARNLLKNGHDVIVYDKNTDA----SQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         5 iA~~l~~~g~~V~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ....|.+.||+|++=.-.=..    =+...+.|....++..++..+||+|+-.-|+..          .-...+++|+++
T Consensus        19 ~v~~L~~~G~~V~VE~gaG~~a~fsD~~Y~~aGA~I~~~~~ev~~~adiIl~v~~p~~----------~e~~~l~~g~~l   88 (136)
T PF05222_consen   19 DVKKLVKLGHEVLVESGAGEGAGFSDEEYEEAGAEIVSRAEEVYSDADIILKVKPPSE----------EELALLKPGQTL   88 (136)
T ss_dssp             HHHHHHHTTSEEEEETTTTGGGTB-HHHHHHTTEEEESSHHHHHTTSSEEEESS---G----------GGGGGS-TTCEE
T ss_pred             HHHHHHhCCCEEEEECCCCCcCcccHHHHhhCCcEEecCchhhcccCCEEEEECCCCH----------HHHhhcCCCcEE
Confidence            456788899999975322111    133445688888888899999999988876521          223568899998


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeeccc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVS  111 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~  111 (183)
                      +......  ....+.+.+.++++..++.-..
T Consensus        89 i~~~~~~--~~~~~~~~l~~~~it~~a~E~i  117 (136)
T PF05222_consen   89 IGFLHPA--QNKELLEALAKKGITAFALELI  117 (136)
T ss_dssp             EEE--GG--GHHHHHHHHHHCTEEEEEGGGS
T ss_pred             EEeeccc--cCHHHHHHHHHCCCEEEEhhhC
Confidence            8555444  4556677777888888885433

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins, represented in this entry, and to a central glycine-rich region which is part of the NAD(H)-binding site.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1X15_A 2BRU_A 1X14_B 1X13_A 2EEZ_F 2VOE_F 2VHV_B 2VHY_A 2VHX_A 2VHW_A ....

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.37  E-value=0.076  Score=44.76  Aligned_cols=102  Identities=15%  Similarity=0.154  Sum_probs=63.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CC--cccCCHHHH-hccCCEEEEecCChHHHHHHhcCCccc-cccCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GA--NMALSLSTL-ASGAEFIISMLPASQDVLDAYDGSDGI-LKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~--~~~~~~~~~-~~~adiVi~~vp~~~~~~~v~~~~~~l-~~~l~   75 (183)
                      +|++++..|++.|++|++++|+.++.+.+.+. +.  ....+..+. ...+|+|+-++|.+.....-   ...+ ...++
T Consensus       390 agrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~~~~~~~~~~~~~~~diiINtT~vGm~~~~~---~~pl~~~~l~  466 (529)
T PLN02520        390 AGKALAYGAKEKGARVVIANRTYERAKELADAVGGQALTLADLENFHPEEGMILANTTSVGMQPNVD---ETPISKHALK  466 (529)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceeeHhHhhhhccccCeEEEecccCCCCCCCC---CCcccHhhCC
Confidence            47899999999999999999999988877653 21  112222222 23578888888765321100   0001 12466


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +..+++|..-....+  .+.+..+++|+..++
T Consensus       467 ~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~  496 (529)
T PLN02520        467 HYSLVFDAVYTPKIT--RLLREAEESGAIIVS  496 (529)
T ss_pred             CCCEEEEeccCCCcC--HHHHHHHHCCCeEeC
Confidence            778899988655544  345555667776666

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=95.29  E-value=0.097  Score=39.31  Aligned_cols=77  Identities=17%  Similarity=0.195  Sum_probs=55.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++..|..++++.+...-       .+  ..+..+.+=|.+.+.++..+   +.+.+.+.+=+++
T Consensus        18 iG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~-------~~--~~~~~~~~DVtD~~~~~~~i---~~~~~~~g~iDiL   85 (246)
T COG4221          18 IGEATARALAEAGAKVVLAARREERLEALADEI-------GA--GAALALALDVTDRAAVEAAI---EALPEEFGRIDIL   85 (246)
T ss_pred             HHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhh-------cc--CceEEEeeccCCHHHHHHHH---HHHHHhhCcccEE
Confidence            589999999999999999999999998876531       11  34555666666777777766   5566666665677


Q ss_pred             EeccCCCch
Q psy755           81 IDSSTVDPQ   89 (183)
Q Consensus        81 id~s~~~~~   89 (183)
                      ++..+..+.
T Consensus        86 vNNAGl~~g   94 (246)
T COG4221          86 VNNAGLALG   94 (246)
T ss_pred             EecCCCCcC
Confidence            766655433

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.27  E-value=0.064  Score=41.63  Aligned_cols=41  Identities=15%  Similarity=0.116  Sum_probs=31.6

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.+++||+||.++..+..+.         .+++++|.+|||.+...
T Consensus       196 ~~l~~~~~~ADIvIsAvGkp~~i~---------~~~ik~gaiVIDvGin~  236 (297)
T PRK14167        196 DDLAAKTRRADIVVAAAGVPELID---------GSMLSEGATVIDVGINR  236 (297)
T ss_pred             CCHHHHHhhCCEEEEccCCcCccC---------HHHcCCCCEEEEccccc
Confidence            467788999999999997765321         35688999999998543

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=95.22  E-value=0.075  Score=40.60  Aligned_cols=32  Identities=31%  Similarity=0.609  Sum_probs=29.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE   32 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~   32 (183)
                      +|..+|+.|+++|++|++..|+.++++++.++
T Consensus        18 IG~~~A~~lA~~g~~liLvaR~~~kL~~la~~   49 (265)
T COG0300          18 IGAELAKQLARRGYNLILVARREDKLEALAKE   49 (265)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHH
Confidence            58999999999999999999999999887653

>PRK14982 acyl-ACP reductase; Provisional

Probab=95.19  E-value=0.037  Score=43.86  Aligned_cols=97  Identities=21%  Similarity=0.290  Sum_probs=62.0

Q ss_pred             CcHHHHHHHHhC-C-CcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKN-G-HDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~-g-~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+.+++.|.+. | .++++++|+++++..+... +.....++.+.+.++|+|+.++..+..+  ++   +  ...+.++
T Consensus       167 IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~~~--~I---~--~~~l~~~  239 (340)
T PRK14982        167 IGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPKGV--EI---D--PETLKKP  239 (340)
T ss_pred             HHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCcCC--cC---C--HHHhCCC
Confidence            688999999754 5 4899999998888776554 2122235778889999999998654321  11   1  1345788


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      .+++|.+--.-.+. .+    .+.++++++..
T Consensus       240 ~~viDiAvPRDVd~-~v----~~~~V~v~~gG  266 (340)
T PRK14982        240 CLMIDGGYPKNLDT-KV----QGPGIHVLKGG  266 (340)
T ss_pred             eEEEEecCCCCCCc-cc----CCCCEEEEeCC
Confidence            99999885332221 11    12566776633

>PRK05678 succinyl-CoA synthetase subunit alpha; Validated

Probab=95.19  E-value=0.12  Score=40.21  Aligned_cols=98  Identities=14%  Similarity=0.151  Sum_probs=60.4

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchh-HHHHHHcCCcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDA-SQTLAKEGANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      |..+.++|.+.|++ .+|-.+|.. .+..  .|...+.++.|+-..  .|++++++|... +..++   ++.... .-+.
T Consensus        21 g~~~l~~l~~~g~~-~v~pVnp~~~~~~v--~G~~~y~sv~dlp~~~~~DlAvi~vp~~~-v~~~l---~e~~~~-gvk~   92 (291)
T PRK05678         21 GTFHTEQMLAYGTN-IVGGVTPGKGGTTV--LGLPVFNTVAEAVEATGANASVIYVPPPF-AADAI---LEAIDA-GIDL   92 (291)
T ss_pred             HHHHHHHHHHCCCC-EEEEECCCCCCCeE--eCeeccCCHHHHhhccCCCEEEEEcCHHH-HHHHH---HHHHHC-CCCE
Confidence            56677788888887 555444431 1111  266777888888776  899999999754 45554   554442 2223


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+|-++.....+.+.+.+...+.|++++.
T Consensus        93 avI~s~Gf~~~~~~~l~~~a~~~girvlG  121 (291)
T PRK05678         93 IVCITEGIPVLDMLEVKAYLERKKTRLIG  121 (291)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHcCCEEEC
Confidence            34444444433334677777777777665

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=95.02  E-value=0.18  Score=41.62  Aligned_cols=96  Identities=16%  Similarity=0.212  Sum_probs=60.2

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|..+.++|.+.||  +|+..+...+.+     .|...+.++.++-...|++++++|.. .+..++   +++... .-+.
T Consensus        22 ~g~~~~~~l~~~gf~g~v~~Vnp~~~~i-----~G~~~~~sl~~lp~~~Dlavi~vp~~-~~~~~l---~e~~~~-gv~~   91 (447)
T TIGR02717        22 VGYAIMKNLIEGGYKGKIYPVNPKAGEI-----LGVKAYPSVLEIPDPVDLAVIVVPAK-YVPQVV---EECGEK-GVKG   91 (447)
T ss_pred             hHHHHHHHHHhCCCCCcEEEECCCCCcc-----CCccccCCHHHCCCCCCEEEEecCHH-HHHHHH---HHHHhc-CCCE
Confidence            36778888999998  565555443321     36777888888877889999999874 455555   555442 2333


Q ss_pred             EEEeccCCCch-------hHHHHHHHHHhcCCcEEe
Q psy755           79 IVIDSSTVDPQ-------VPQTLSNLAREKQITFLD  107 (183)
Q Consensus        79 iiid~s~~~~~-------~~~~~~~~~~~~g~~~~~  107 (183)
                      +++- |+..+.       ..+.+.+..++.|++++.
T Consensus        92 ~vi~-s~gf~e~g~~g~~~~~~l~~~a~~~girvlG  126 (447)
T TIGR02717        92 AVVI-TAGFKEVGEEGAELEQELVEIARKYGMRLLG  126 (447)
T ss_pred             EEEE-CCCccccCcchHHHHHHHHHHHHHcCCEEEe
Confidence            4443 332221       234566666666777665

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=95.02  E-value=0.028  Score=43.72  Aligned_cols=87  Identities=21%  Similarity=0.327  Sum_probs=58.7

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-C--Ccc-c---CCHHHHhccCCEEEEec--CChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKE-G--ANM-A---LSLSTLASGAEFIISML--PASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g--~~~-~---~~~~~~~~~adiVi~~v--p~~~~~~~v~~~~~~l~~   72 (183)
                      |..-|+-....|-+|++.|+|.++++.+-.. +  +.. .   ..+++.+..+|+||-+|  |...+-+-+.   +++..
T Consensus       180 gtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaPkLvt---~e~vk  256 (371)
T COG0686         180 GTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPKLVT---REMVK  256 (371)
T ss_pred             cchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCceehh---HHHHH
Confidence            4444555566678999999999988776554 2  222 2   24567788999999887  4433323332   77778


Q ss_pred             cCCCCcEEEeccCCCchhH
Q psy755           73 HAKPGVIVIDSSTVDPQVP   91 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~   91 (183)
                      .+++|.+|||..-......
T Consensus       257 ~MkpGsVivDVAiDqGGc~  275 (371)
T COG0686         257 QMKPGSVIVDVAIDQGGCF  275 (371)
T ss_pred             hcCCCcEEEEEEEcCCCce
Confidence            8999999999876544443

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=94.99  E-value=0.1  Score=41.21  Aligned_cols=72  Identities=19%  Similarity=0.202  Sum_probs=47.3

Q ss_pred             HHHHHHh-CCCcEEEEcCCchhHHHHHHcCCcc-cC----CH-HHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            5 MARNLLK-NGHDVIVYDKNTDASQTLAKEGANM-AL----SL-STLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         5 iA~~l~~-~g~~V~~~~~~~~~~~~~~~~g~~~-~~----~~-~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|..+++ .|.+|+++||++++.+.+.+.|... .+    +. +++-+.+|+|+.+++ +..+...+       +.++++
T Consensus       181 ~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~~~~l-------~~l~~~  252 (339)
T COG1064         181 MAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG-PATLEPSL-------KALRRG  252 (339)
T ss_pred             HHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhHHHHH-------HHHhcC
Confidence            4555555 7899999999999999999887532 11    11 222223999999998 66665553       445555


Q ss_pred             cEEEecc
Q psy755           78 VIVIDSS   84 (183)
Q Consensus        78 ~iiid~s   84 (183)
                      -.++-.+
T Consensus       253 G~~v~vG  259 (339)
T COG1064         253 GTLVLVG  259 (339)
T ss_pred             CEEEEEC
Confidence            5554444

>KOG2741|consensus

Probab=94.97  E-value=0.24  Score=39.04  Aligned_cols=90  Identities=14%  Similarity=0.240  Sum_probs=63.8

Q ss_pred             CCcEE-EEcCCchhHHHHHHc-CC---cccCCHHHHhccC--CEEEEecCChHHHHHHhcCCccccccCCCCcEEE-ecc
Q psy755           13 GHDVI-VYDKNTDASQTLAKE-GA---NMALSLSTLASGA--EFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI-DSS   84 (183)
Q Consensus        13 g~~V~-~~~~~~~~~~~~~~~-g~---~~~~~~~~~~~~a--diVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii-d~s   84 (183)
                      +|+|+ ++||+.+++..+++. ++   +...+.++++++.  |+|.+..|.+++.+-+.       ..+..|+.|+ .--
T Consensus        32 ~~~Ivava~~s~~~A~~fAq~~~~~~~k~y~syEeLakd~~vDvVyi~~~~~qH~evv~-------l~l~~~K~VL~EKP  104 (351)
T KOG2741|consen   32 NHQIVAVADPSLERAKEFAQRHNIPNPKAYGSYEELAKDPEVDVVYISTPNPQHYEVVM-------LALNKGKHVLCEKP  104 (351)
T ss_pred             CcEEEEEecccHHHHHHHHHhcCCCCCccccCHHHHhcCCCcCEEEeCCCCccHHHHHH-------HHHHcCCcEEeccc
Confidence            56666 469999988887765 33   4577999999865  99999999988766553       3455666543 211


Q ss_pred             -CCCchhHHHHHHHHHhcCCcEEeec
Q psy755           85 -TVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        85 -~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                       .........+.+..+.+|+.|+++-
T Consensus       105 la~n~~e~~~iveaA~~rgv~~meg~  130 (351)
T KOG2741|consen  105 LAMNVAEAEEIVEAAEARGVFFMEGL  130 (351)
T ss_pred             ccCCHHHHHHHHHHHHHcCcEEEeee
Confidence             2244556778888888898888843

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=94.93  E-value=0.038  Score=44.55  Aligned_cols=79  Identities=15%  Similarity=0.180  Sum_probs=47.9

Q ss_pred             cHHHHHHHHhC-CCcEEEEcCCchhHHHHHHcC-------CcccCCHH-HHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLKN-GHDVIVYDKNTDASQTLAKEG-------ANMALSLS-TLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~~-g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~-~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |..+.+.|.++ .++|..+.+++..-+.+....       .....+.+ +.++++|+||+++|... ...+.       +
T Consensus        51 G~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~-s~~i~-------~  122 (381)
T PLN02968         51 GAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT-TQEII-------K  122 (381)
T ss_pred             HHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH-HHHHH-------H
Confidence            67788888887 568888766544332222111       11111222 22478999999998854 33332       3


Q ss_pred             cCCCCcEEEeccCCCc
Q psy755           73 HAKPGVIVIDSSTVDP   88 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~   88 (183)
                      .+..|..|||.|+...
T Consensus       123 ~~~~g~~VIDlSs~fR  138 (381)
T PLN02968        123 ALPKDLKIVDLSADFR  138 (381)
T ss_pred             HHhCCCEEEEcCchhc
Confidence            3457889999998643

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=94.90  E-value=0.16  Score=39.37  Aligned_cols=80  Identities=18%  Similarity=0.276  Sum_probs=53.5

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhH--HHHHHcCCcc-cCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDAS--QTLAKEGANM-ALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~--~~~~~~g~~~-~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||+.++..+.+. +.++. ++|+++++.  +.+.+.|+.. .++.++++.  +-|+|++++|...+.+..       ...
T Consensus        12 IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~~~e~ll~~~dIDaV~iaTp~~~H~e~a-------~~a   84 (285)
T TIGR03215        12 IGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAEGVDGLLANPDIDIVFDATSAKAHARHA-------RLL   84 (285)
T ss_pred             HHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEECCHHHHhcCCCCCEEEECCCcHHHHHHH-------HHH
Confidence            355565555543 45766 468888763  4444557654 457777775  578899999987665544       245


Q ss_pred             CCCCcEEEeccCCC
Q psy755           74 AKPGVIVIDSSTVD   87 (183)
Q Consensus        74 l~~~~iiid~s~~~   87 (183)
                      +..|+.++|.+...
T Consensus        85 l~aGk~VIdekPa~   98 (285)
T TIGR03215        85 AELGKIVIDLTPAA   98 (285)
T ss_pred             HHcCCEEEECCccc
Confidence            67899999888654

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK05569 flavodoxin; Provisional

Probab=94.90  E-value=0.76  Score=31.31  Aligned_cols=86  Identities=12%  Similarity=0.054  Sum_probs=48.9

Q ss_pred             HhccCCEEEEecCCh-------HHHHHHhcCCccccccCCCCcEEEeccCC--C-chhHHHHHHHHHhcCCcEEeecccC
Q psy755           43 LASGAEFIISMLPAS-------QDVLDAYDGSDGILKHAKPGVIVIDSSTV--D-PQVPQTLSNLAREKQITFLDAPVSG  112 (183)
Q Consensus        43 ~~~~adiVi~~vp~~-------~~~~~v~~~~~~l~~~l~~~~iiid~s~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~  112 (183)
                      .+.++|.|++..|.-       ..++.++   +.+.....+|+.+.-.++.  . ......+.+.+...|+.++..-   
T Consensus        45 ~~~~~d~iilgsPty~~~~~~~~~~~~~~---~~l~~~~~~~K~v~~f~t~g~~~~~~~~~~~~~l~~~g~~~~~~~---  118 (141)
T PRK05569         45 DVLEADAVAFGSPSMDNNNIEQEEMAPFL---DQFKLTPNENKKCILFGSYGWDNGEFMKLWKDRMKDYGFNVIGDL---  118 (141)
T ss_pred             HHhhCCEEEEECCCcCCCcCChHHHHHHH---HHhhccCcCCCEEEEEeCCCCCCCcHHHHHHHHHHHCCCeEeeeE---
Confidence            466899999999851       2355555   4454333356554333332  2 2344556677777787766521   


Q ss_pred             CHHHHhcCceEEEecCCHHHHHHHHHHHHHhc
Q psy755          113 GTKAAQEATLTFMVGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus       113 ~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g  144 (183)
                                .+--..+++..++++++-+.+.
T Consensus       119 ----------~~~~~p~~~~~~~~~~~g~~l~  140 (141)
T PRK05569        119 ----------AVNESPNKEELNSAKELGKKLA  140 (141)
T ss_pred             ----------EEccCCCHHHHHHHHHHHHHHh
Confidence                      1111236677777777766653

>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit

Probab=94.88  E-value=0.19  Score=38.95  Aligned_cols=98  Identities=17%  Similarity=0.147  Sum_probs=60.8

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchh-HHHHHHcCCcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDA-SQTLAKEGANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      |..+-..+...|++ .+|..+|.+ .+.  -.|...+.++.|+-+.  .|++++++|... +..++   ++.... .-+.
T Consensus        19 ~~~~~~~~~~~g~~-~v~~V~p~~~~~~--v~G~~~y~sv~dlp~~~~~Dlavi~vpa~~-v~~~l---~e~~~~-Gvk~   90 (286)
T TIGR01019        19 GSFHTEQMLAYGTN-IVGGVTPGKGGTT--VLGLPVFDSVKEAVEETGANASVIFVPAPF-AADAI---FEAIDA-GIEL   90 (286)
T ss_pred             HHHHHHHHHhCCCC-EEEEECCCCCcce--ecCeeccCCHHHHhhccCCCEEEEecCHHH-HHHHH---HHHHHC-CCCE
Confidence            45566777888888 666767762 111  1367778888887765  799999998744 55554   444432 2223


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .||-.+.......+.+.+..++.|++++.
T Consensus        91 avIis~Gf~e~~~~~l~~~a~~~girilG  119 (286)
T TIGR01019        91 IVCITEGIPVHDMLKVKRYMEESGTRLIG  119 (286)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHcCCEEEC
Confidence            44433333333346777777777777665

ATP citrate lyases appear to form an outgroup.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=94.87  E-value=0.12  Score=39.57  Aligned_cols=56  Identities=16%  Similarity=0.307  Sum_probs=42.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhc-cCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS-GAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~adiVi~~vp~   56 (183)
                      ||++|...|.+.||+|++..|++.+.+.-....+...+.+.+... .+|+||--.-.
T Consensus        10 IG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~   66 (297)
T COG1090          10 IGRALTARLRKGGHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGE   66 (297)
T ss_pred             hhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCC
Confidence            689999999999999999999998766544434444445555555 69999977643

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.86  E-value=0.54  Score=38.60  Aligned_cols=104  Identities=18%  Similarity=0.176  Sum_probs=59.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh----HHHHHHcCCccc--CCHHHHhcc-CCEEEEec--CChHH-HHHHhc-----
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA----SQTLAKEGANMA--LSLSTLASG-AEFIISML--PASQD-VLDAYD-----   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~----~~~~~~~g~~~~--~~~~~~~~~-adiVi~~v--p~~~~-~~~v~~-----   65 (183)
                      +|.++|+.|++.|++|+++|++...    .+.+.+.|+...  ....+.... .|+||..-  |.... +.....     
T Consensus        16 ~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~~~~~~~~~a~~~~i~v   95 (447)
T PRK02472         16 SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKNPGIPYTNPMVEKALEKGIPI   95 (447)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCCCCCCHHHHHHHHCCCcE
Confidence            4889999999999999999976532    244555565442  233444444 89888865  33222 222110     


Q ss_pred             -CCccccccC-CCCcEEEeccCCCchhHHHHHHHHHhcCCc
Q psy755           66 -GSDGILKHA-KPGVIVIDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        66 -~~~~l~~~l-~~~~iiid~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                       +..++...+ ....+-|-.|+.+..+..-+...+...|..
T Consensus        96 ~~~~el~~~~~~~~~I~VTGT~GKTTTt~ll~~iL~~~g~~  136 (447)
T PRK02472         96 ITEVELAYLISEAPIIGITGSNGKTTTTTLIGEMLKAGGQH  136 (447)
T ss_pred             EeHHHHHHHhcCCCEEEEeCCCchHHHHHHHHHHHHHCCCC
Confidence             001111122 223344566667777887777888776644

>KOG1014|consensus

Probab=94.85  E-value=0.038  Score=42.83  Aligned_cols=32  Identities=31%  Similarity=0.584  Sum_probs=29.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE   32 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~   32 (183)
                      +|+++|+-|++.|++|++..|+++++++..++
T Consensus        61 IGKayA~eLAkrG~nvvLIsRt~~KL~~v~kE   92 (312)
T KOG1014|consen   61 IGKAYARELAKRGFNVVLISRTQEKLEAVAKE   92 (312)
T ss_pred             chHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Confidence            69999999999999999999999999887663

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.84  E-value=0.15  Score=41.85  Aligned_cols=57  Identities=19%  Similarity=0.260  Sum_probs=42.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--CCc--cc--CCHHH----HhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--GAN--MA--LSLST----LASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--g~~--~~--~~~~~----~~~~adiVi~~vp~~   57 (183)
                      +|..+++.|.+.|++|++.|+++++.+.+.+.  +..  ..  .+...    .++++|.|++++++.
T Consensus       242 ~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~~  308 (453)
T PRK09496        242 IGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTNDD  308 (453)
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCCc
Confidence            37889999999999999999999998888764  321  11  12221    246899999998864

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=94.80  E-value=0.12  Score=40.42  Aligned_cols=68  Identities=19%  Similarity=0.257  Sum_probs=43.2

Q ss_pred             CcHHHHHHHHhCCC-cEEEE-cCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGH-DVIVY-DKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      .|.-+.+.|.++.+ ++... +++.          .. ..+.++.++++|+||+|+|.....+-+    +.   ....|.
T Consensus        13 ~G~el~rlL~~HP~~el~~l~s~~~----------~~-~~~~~~~~~~~D~vFlalp~~~s~~~~----~~---~~~~g~   74 (310)
T TIGR01851        13 TGLQIRERLSGRDDIELLSIAPDRR----------KD-AAERAKLLNAADVAILCLPDDAAREAV----SL---VDNPNT   74 (310)
T ss_pred             hHHHHHHHHhCCCCeEEEEEecccc----------cC-cCCHhHhhcCCCEEEECCCHHHHHHHH----HH---HHhCCC
Confidence            37788888888754 44433 2221          01 124556668899999999986544333    22   234788


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      .|||.|+.
T Consensus        75 ~VIDlSad   82 (310)
T TIGR01851        75 CIIDASTA   82 (310)
T ss_pred             EEEECChH
Confidence            99999964

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.74  E-value=0.19  Score=39.19  Aligned_cols=79  Identities=15%  Similarity=0.230  Sum_probs=53.3

Q ss_pred             cHHHHHHHHhC-CCcEE-EEcCCchh--HHHHHHcCCcc-cCCHHHHhc-----cCCEEEEecCChHHHHHHhcCCcccc
Q psy755            2 GSHMARNLLKN-GHDVI-VYDKNTDA--SQTLAKEGANM-ALSLSTLAS-----GAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         2 G~~iA~~l~~~-g~~V~-~~~~~~~~--~~~~~~~g~~~-~~~~~~~~~-----~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      |+.+...+.+. +.++. ++|+++++  .+.+.+.|+.. .++.+++++     +.|+||.++|...+.+..       .
T Consensus        16 Gt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~~~ie~LL~~~~~~dIDiVf~AT~a~~H~e~a-------~   88 (302)
T PRK08300         16 GTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSAEGIDGLLAMPEFDDIDIVFDATSAGAHVRHA-------A   88 (302)
T ss_pred             HHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCcccCCHHHHHhCcCCCCCCEEEECCCHHHHHHHH-------H
Confidence            55555556654 45665 56888864  34455567765 467888874     589999999886554443       2


Q ss_pred             ccCCCCcEEEeccCCC
Q psy755           72 KHAKPGVIVIDSSTVD   87 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~   87 (183)
                      .....|+.++|.+...
T Consensus        89 ~a~eaGk~VID~sPA~  104 (302)
T PRK08300         89 KLREAGIRAIDLTPAA  104 (302)
T ss_pred             HHHHcCCeEEECCccc
Confidence            3456899999999764

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=94.69  E-value=0.12  Score=40.78  Aligned_cols=53  Identities=19%  Similarity=0.255  Sum_probs=37.5

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHH-----HHH---cC----CcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQT-----LAK---EG----ANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~-----~~~---~g----~~~~~~~~~~~~~adiVi~~v   54 (183)
                      ||..+|..++..|+ +|+++|+++++.+.     ...   .+    +....+. +.+++||+||++.
T Consensus        17 vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~ta   82 (321)
T PTZ00082         17 IGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIVTA   82 (321)
T ss_pred             HHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEECC
Confidence            68899999998896 89999999985421     111   11    2223455 5679999999977

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.69  E-value=0.19  Score=37.68  Aligned_cols=78  Identities=22%  Similarity=0.296  Sum_probs=55.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----CCc--c-cCCHHHHhc---cCCEEEE-----ecCChHHHHHHhcC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKE----GAN--M-ALSLSTLAS---GAEFIIS-----MLPASQDVLDAYDG   66 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~--~-~~~~~~~~~---~adiVi~-----~vp~~~~~~~v~~~   66 (183)
                      |+.++..+++.|.+|++.|.+++.++-+...    |+.  + ..+.+|++.   .-|+|++     .||+++.   ++  
T Consensus        70 gG~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~~edl~~~~~~FDvV~cmEVlEHv~dp~~---~~--  144 (243)
T COG2227          70 GGILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQATVEDLASAGGQFDVVTCMEVLEHVPDPES---FL--  144 (243)
T ss_pred             ccHhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhhhHHHHHhcCCCccEEEEhhHHHccCCHHH---HH--
Confidence            5678899999999999999999988766532    433  2 445666654   5788765     4677654   33  


Q ss_pred             CccccccCCCCcEEEeccC
Q psy755           67 SDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~   85 (183)
                       +.....+++|.+++..+-
T Consensus       145 -~~c~~lvkP~G~lf~STi  162 (243)
T COG2227         145 -RACAKLVKPGGILFLSTI  162 (243)
T ss_pred             -HHHHHHcCCCcEEEEecc
Confidence             556778888887766553

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=94.69  E-value=0.036  Score=38.23  Aligned_cols=55  Identities=18%  Similarity=0.244  Sum_probs=39.6

Q ss_pred             cHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc----------CCcccCCHHHHhccCCEEEEecCC
Q psy755            2 GSHMARNLLKNGH--DVIVYDKNTDASQTLAKE----------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         2 G~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      |.++|..|...+.  +++++|+++++++.....          .........+.+++||+|+++.-.
T Consensus        13 G~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~   79 (141)
T PF00056_consen   13 GSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGV   79 (141)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTST
T ss_pred             HHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEeccc
Confidence            7788988888876  899999998765543221          123333566778899999999844

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=94.64  E-value=0.16  Score=41.42  Aligned_cols=75  Identities=19%  Similarity=0.247  Sum_probs=49.0

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEe
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVID   82 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid   82 (183)
                      ..+++.|.+.|.+|.+||..-..... .  .....+++.++++++|.|++++..++ .+.+=+  +.+.+.+ +..+|+|
T Consensus       336 ~~~~~~L~~~g~~v~~~DP~~~~~~~-~--~~~~~~~~~~~~~~ad~~v~~t~~~~-~~~~~~--~~~~~~~-~~~~v~D  408 (411)
T TIGR03026       336 LDIIELLKEKGAKVKAYDPLVPEEEV-K--GLPLIDDLEEALKGADALVILTDHDE-FKDLDL--EKIKDLM-KGKVVVD  408 (411)
T ss_pred             HHHHHHHHhCCCEEEEECCCCChhhh-h--hcccCCCHHHHHhCCCEEEEecCCHH-HhccCH--HHHHHhc-CCCEEEe
Confidence            45788999999999999976433211 1  11235688899999999999998854 333210  3344433 3557888


Q ss_pred             cc
Q psy755           83 SS   84 (183)
Q Consensus        83 ~s   84 (183)
                      ..
T Consensus       409 ~~  410 (411)
T TIGR03026       409 TR  410 (411)
T ss_pred             CC
Confidence            54

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=94.63  E-value=0.12  Score=40.24  Aligned_cols=56  Identities=21%  Similarity=0.285  Sum_probs=39.7

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc----------CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE----------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|.++|..|+..+.  +++++|++.++++.....          ......+..+.+++||+|+++.-.
T Consensus         7 VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVitag~   74 (299)
T TIGR01771         7 VGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITAGA   74 (299)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECCCC
Confidence            47889999988876  799999988765433221          223333455778999999998754

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.58  E-value=0.057  Score=42.75  Aligned_cols=78  Identities=22%  Similarity=0.203  Sum_probs=46.2

Q ss_pred             cHHHHHHHHhCCCc---EEEEcCCchhHHHHHHcC--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHD---VIVYDKNTDASQTLAKEG--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~---V~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |..+.+.|.+.+|+   +....+.++.-+.+.-.+  ....+...+...++|+||+|+|.....+.+    +   .++..
T Consensus        14 G~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~g~s~~~~----~---~~~~~   86 (334)
T PRK14874         14 GREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGGSVSKKYA----P---KAAAA   86 (334)
T ss_pred             HHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCChHHHHHHH----H---HHHhC
Confidence            77889999998875   355544433322222112  222221222347899999999886543322    2   23457


Q ss_pred             CcEEEeccCC
Q psy755           77 GVIVIDSSTV   86 (183)
Q Consensus        77 ~~iiid~s~~   86 (183)
                      |..|||.|+.
T Consensus        87 G~~VIDlS~~   96 (334)
T PRK14874         87 GAVVIDNSSA   96 (334)
T ss_pred             CCEEEECCch
Confidence            8899999975

>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=94.56  E-value=0.18  Score=40.04  Aligned_cols=79  Identities=16%  Similarity=0.224  Sum_probs=50.6

Q ss_pred             CcHHHHHHHHhC-CCcEEE-EcCCchhHHHHHH-c------------------CCcccCCHHHHhccCCEEEEecCChHH
Q psy755            1 MGSHMARNLLKN-GHDVIV-YDKNTDASQTLAK-E------------------GANMALSLSTLASGAEFIISMLPASQD   59 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~-~~~~~~~~~~~~~-~------------------g~~~~~~~~~~~~~adiVi~~vp~~~~   59 (183)
                      ||+.+++.+.+. ++++++ +|++++....+.+ .                  ++....+.+++..++|+||.++|....
T Consensus        12 IGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~vDVVIdaT~~~~~   91 (341)
T PRK04207         12 IGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKADIVVDATPGGVG   91 (341)
T ss_pred             HHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccCCEEEECCCchhh
Confidence            678888877754 567765 5767654443332 1                  233345677777889999999987554


Q ss_pred             HHHHhcCCccccccCCCCcEEEeccCC
Q psy755           60 VLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        60 ~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      .+..       ..++..|+.+|+.++.
T Consensus        92 ~e~a-------~~~~~aGk~VI~~~~~  111 (341)
T PRK04207         92 AKNK-------ELYEKAGVKAIFQGGE  111 (341)
T ss_pred             HHHH-------HHHHHCCCEEEEcCCC
Confidence            3332       3455677888877764

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.48  E-value=0.45  Score=39.74  Aligned_cols=103  Identities=14%  Similarity=0.129  Sum_probs=60.8

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc--CCHHHHhccCCEEEEecCChH--H-HHHHh------cCCccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA--LSLSTLASGAEFIISMLPASQ--D-VLDAY------DGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~adiVi~~vp~~~--~-~~~v~------~~~~~l   70 (183)
                      |.+.++.|.+.|++|+++|+++...+.+.+.|+...  ....+.++++|+||.+-.-+.  + ++..-      .+.-++
T Consensus        24 G~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~~~p~~~~a~~~gi~v~~~iel  103 (488)
T PRK03369         24 GRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRPTAPVLAAAAAAGVPIWGDVEL  103 (488)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCCCCCHHHHHHHHCCCcEeeHHHH
Confidence            677788889999999999988776666666676442  233455678999998763322  2 11110      000011


Q ss_pred             c-cc-----CC-CCc-EEEeccCCCchhHHHHHHHHHhcCCc
Q psy755           71 L-KH-----AK-PGV-IVIDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        71 ~-~~-----l~-~~~-iiid~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      . ..     +. +.+ +-|-.|+++..+..-+...+...|..
T Consensus       104 ~~~~~~~~~~~~~~~vIgITGTnGKTTTt~li~~iL~~~g~~  145 (488)
T PRK03369        104 AWRLDAAGCYGPPRRWLVVTGTNGKTTTTSMLHAMLIAAGRR  145 (488)
T ss_pred             hhhhhhhhccCCCCCEEEEECCCcHHHHHHHHHHHHHHcCCc
Confidence            1 11     11 222 33566667777777777888776643

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=94.47  E-value=0.098  Score=38.86  Aligned_cols=56  Identities=27%  Similarity=0.414  Sum_probs=43.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh--HHHHHHcCCcc-------cCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA--SQTLAKEGANM-------ALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~--~~~~~~~g~~~-------~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.++..|.+.+++|.+..|++.+  .+.+.+.|+..       .+++.++++++|.||++++.
T Consensus        10 ~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~   74 (233)
T PF05368_consen   10 QGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP   74 (233)
T ss_dssp             HHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred             HHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence            3889999999999999999998753  55666666431       12445678899999999983

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK10206 putative oxidoreductase; Provisional

Probab=94.46  E-value=0.39  Score=38.20  Aligned_cols=87  Identities=14%  Similarity=0.198  Sum_probs=55.7

Q ss_pred             CCcEE-EEcCCchhHHHHHHcC-CcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE-ecc-CC
Q psy755           13 GHDVI-VYDKNTDASQTLAKEG-ANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI-DSS-TV   86 (183)
Q Consensus        13 g~~V~-~~~~~~~~~~~~~~~g-~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii-d~s-~~   86 (183)
                      +++|+ ++|+++++.+...+.+ ....++.+++++  +.|+|++++|...+.+.+.       ..+..|+.|+ +-= ..
T Consensus        27 ~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~ell~~~~iD~V~I~tp~~~H~~~~~-------~al~aGkhVl~EKPla~   99 (344)
T PRK10206         27 SWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAK-------RALEAGKNVLVEKPFTP   99 (344)
T ss_pred             CEEEEEEEcCChhHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEeCCchHHHHHHH-------HHHHcCCcEEEecCCcC
Confidence            46766 5899886653333344 556778999986  5799999999977655553       4566777654 211 12


Q ss_pred             CchhHHHHHHHHHhcCCcEE
Q psy755           87 DPQVPQTLSNLAREKQITFL  106 (183)
Q Consensus        87 ~~~~~~~~~~~~~~~g~~~~  106 (183)
                      .....+.+.+..++.|..+.
T Consensus       100 ~~~ea~~l~~~a~~~~~~l~  119 (344)
T PRK10206        100 TLAEAKELFALAKSKGLTVT  119 (344)
T ss_pred             CHHHHHHHHHHHHHhCCEEE
Confidence            34455666666766665543

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.43  E-value=0.47  Score=34.79  Aligned_cols=58  Identities=19%  Similarity=0.203  Sum_probs=37.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch-hHHHHHHcC-Cccc-CC-HHHHhccCCEEEEecCChH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD-ASQTLAKEG-ANMA-LS-LSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g-~~~~-~~-~~~~~~~adiVi~~vp~~~   58 (183)
                      ||...++.|.+.|++|++++++.. .+..+...+ +... .. ..+.+.++|+||.++.++.
T Consensus        21 va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~d~e   82 (202)
T PRK06718         21 VAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATNDPR   82 (202)
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCCCHH
Confidence            355677888899999999987653 334444443 2211 11 1344678999999997754

>CHL00194 ycf39 Ycf39; Provisional

Probab=94.41  E-value=0.081  Score=41.34  Aligned_cols=55  Identities=24%  Similarity=0.317  Sum_probs=40.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-------ccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-------MALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-------~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|.+.||+|++.+|++++...+...++.       ..+++.++++++|+||-++.
T Consensus        12 iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~   73 (317)
T CHL00194         12 LGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDAST   73 (317)
T ss_pred             HHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCC
Confidence            48899999999999999999998765544433432       12234567889999998764

>PRK05568 flavodoxin; Provisional

Probab=94.37  E-value=1.1  Score=30.61  Aligned_cols=110  Identities=13%  Similarity=0.128  Sum_probs=61.5

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCCh-------HHHHHHhcCCccccccCC
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPAS-------QDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~-------~~~~~v~~~~~~l~~~l~   75 (183)
                      ..|+..+.+.|++|.+++.+...              . ..+.++|.|++..|.-       ..++..+   +.+...+ 
T Consensus        20 ~~i~~~~~~~g~~v~~~~~~~~~--------------~-~~~~~~d~iilgsp~y~~~~~~~~~~~~f~---~~~~~~~-   80 (142)
T PRK05568         20 NLIAEGAKENGAEVKLLNVSEAS--------------V-DDVKGADVVALGSPAMGDEVLEEGEMEPFV---ESISSLV-   80 (142)
T ss_pred             HHHHHHHHHCCCeEEEEECCCCC--------------H-HHHHhCCEEEEECCccCcccccchhHHHHH---HHhhhhh-
Confidence            34555555556666666543321              1 2356899999999863       2355554   4444333 


Q ss_pred             CCcEEEeccC-C--CchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHh
Q psy755           76 PGVIVIDSST-V--DPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCM  143 (183)
Q Consensus        76 ~~~iiid~s~-~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~  143 (183)
                      +++.+.-.++ .  .......+.+.+...|..++..++.            +--..+++..++++++-+.+
T Consensus        81 ~~k~~~~f~t~G~~~~~~~~~~~~~l~~~g~~~~~~~~~------------~~~~p~~~~l~~~~~~g~~l  139 (142)
T PRK05568         81 KGKKLVLFGSYGWGDGEWMRDWVERMEGYGANLVNEGLI------------VNNTPEGEGIEKCKALGEAL  139 (142)
T ss_pred             CCCEEEEEEccCCCCChHHHHHHHHHHHCCCEEeCCcEE------------EecCCCHHHHHHHHHHHHHH
Confidence            4554333232 2  2445667777777778877774321            11123567777777776655

>PRK07890 short chain dehydrogenase; Provisional

Probab=94.37  E-value=0.2  Score=37.51  Aligned_cols=30  Identities=20%  Similarity=0.418  Sum_probs=25.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|+++..+.+.
T Consensus        17 IG~~la~~l~~~G~~V~~~~r~~~~~~~~~   46 (258)
T PRK07890         17 LGRTLAVRAARAGADVVLAARTAERLDEVA   46 (258)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999987765543

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=94.31  E-value=0.074  Score=42.31  Aligned_cols=78  Identities=12%  Similarity=0.105  Sum_probs=44.0

Q ss_pred             cHHHHHHHHhCCCc---EEEE--cCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHD---VIVY--DKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~---V~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |..+.+.|.+.+|+   +...  .|+..+.-..........+...+.++++|+||+|+|.....+-+    ..   ....
T Consensus        20 G~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~~s~~~~----~~---~~~~   92 (344)
T PLN02383         20 GQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGSISKKFG----PI---AVDK   92 (344)
T ss_pred             HHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcHHHHHHH----HH---HHhC
Confidence            67788888887773   3322  34433321111111122211223457899999999986543322    22   2347


Q ss_pred             CcEEEeccCC
Q psy755           77 GVIVIDSSTV   86 (183)
Q Consensus        77 ~~iiid~s~~   86 (183)
                      |..|||.|+.
T Consensus        93 g~~VIDlS~~  102 (344)
T PLN02383         93 GAVVVDNSSA  102 (344)
T ss_pred             CCEEEECCch
Confidence            8999999975

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=94.30  E-value=0.29  Score=36.57  Aligned_cols=98  Identities=22%  Similarity=0.314  Sum_probs=60.0

Q ss_pred             CcHHHHHHHHhCCCcEE-EEcC----------CchhHHHHHHc-C-------CcccCCHHHH-hccCCEEEEecCChHHH
Q psy755            1 MGSHMARNLLKNGHDVI-VYDK----------NTDASQTLAKE-G-------ANMALSLSTL-ASGAEFIISMLPASQDV   60 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~-~~~~----------~~~~~~~~~~~-g-------~~~~~~~~~~-~~~adiVi~~vp~~~~~   60 (183)
                      +|+.+++.|.+.|.+|+ +.|.          +.+.+.+..+. |       .... +..+. -.+||+++-|.+.+.-.
T Consensus        42 VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~-~~~~i~~~~~Dvlip~a~~~~i~  120 (227)
T cd01076          42 VGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERI-TNEELLELDCDILIPAALENQIT  120 (227)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceec-CCccceeecccEEEecCccCccC
Confidence            47889999999999988 5576          55555554443 2       1111 12222 23799999999765433


Q ss_pred             HHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        61 ~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      ...       .+.+ +=++|+...+. |.+ ....+.+.++|+.|+...
T Consensus       121 ~~~-------~~~l-~a~~I~egAN~-~~t-~~a~~~L~~rGi~~~PD~  159 (227)
T cd01076         121 ADN-------ADRI-KAKIIVEAANG-PTT-PEADEILHERGVLVVPDI  159 (227)
T ss_pred             HHH-------Hhhc-eeeEEEeCCCC-CCC-HHHHHHHHHCCCEEEChH
Confidence            333       2333 23455555544 444 567788899999888743

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=94.28  E-value=0.76  Score=35.65  Aligned_cols=140  Identities=11%  Similarity=0.158  Sum_probs=76.2

Q ss_pred             HHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHH---HHHhcC-----CccccccCC
Q psy755            4 HMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV---LDAYDG-----SDGILKHAK   75 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~---~~v~~~-----~~~l~~~l~   75 (183)
                      -+++.|.+.|++|.+|...+.. ..+  .|+......++.++++|+||+++|....-   +.++..     .+++...++
T Consensus        15 ~~~~~l~~~g~~v~~~g~~~~~-~~~--~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~i~~~~~~~~~~l~~~~l~~~~   91 (287)
T TIGR02853        15 ELIRKLEELDAKISLIGFDQLE-DGF--TGAVKCELLELDLTTLDVVILPVPGTSHDGKVATVFSNEKVVLTPELLESTK   91 (287)
T ss_pred             HHHHHHHHCCCEEEEEeccccc-ccc--ccceeecchhhhhccCCEEEECCccccCCceEecccccCCccccHHHHHhcC
Confidence            4788999999999998754310 001  15556667777789999999999953321   111100     123344555


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEE------eecccCCHHHHh--------------cCceEEEecCCHHHHHH
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFL------DAPVSGGTKAAQ--------------EATLTFMVGGDKSSLEK  135 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~------~~~~~~~~~~~~--------------~~~~~~~~~g~~~~~~~  135 (183)
                      .+.++.  ++....+.   .+...++|+.+.      +.+..+..+-++              .+..+.++|. ...-..
T Consensus        92 ~~~~~~--~G~~~~~l---~~~a~~~gi~v~~~~~~~~va~~n~~~~Ae~ai~~al~~~~~~l~gk~v~IiG~-G~iG~a  165 (287)
T TIGR02853        92 GHCTIY--VGISNPYL---EQLAADAGVKLIELFERDDVAIYNSIPTAEGAIMMAIEHTDFTIHGSNVMVLGF-GRTGMT  165 (287)
T ss_pred             CCCEEE--EecCCHHH---HHHHHHCCCeEEEEEeccceEEEccHhHHHHHHHHHHHhcCCCCCCCEEEEEcC-hHHHHH
Confidence            544432  33333333   335667787777      333333221111              1343344443 333356


Q ss_pred             HHHHHHHhcCCeEEeCC
Q psy755          136 AKPILKCMGRNIVHCGD  152 (183)
Q Consensus       136 ~~~l~~~~g~~~~~~g~  152 (183)
                      +...+..+|.++++.+.
T Consensus       166 vA~~L~~~G~~V~v~~R  182 (287)
T TIGR02853       166 IARTFSALGARVFVGAR  182 (287)
T ss_pred             HHHHHHHCCCEEEEEeC
Confidence            66777788887665554

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.21  E-value=0.47  Score=39.24  Aligned_cols=104  Identities=16%  Similarity=0.248  Sum_probs=59.7

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch-----hHHHHHHcCCccc--CCHHHHhccCCEEEEecCCh---HHHHHHhc-CC---
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD-----ASQTLAKEGANMA--LSLSTLASGAEFIISMLPAS---QDVLDAYD-GS---   67 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~-----~~~~~~~~g~~~~--~~~~~~~~~adiVi~~vp~~---~~~~~v~~-~~---   67 (183)
                      |.++|+.|.+.|++|.++|+++.     ..+.+.+.|+...  ....+.+.++|+||.+-.-+   ..+..... +.   
T Consensus        26 G~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi~~~~p~~~~a~~~~i~i~  105 (458)
T PRK01710         26 NIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSMRIDSPELVKAKEEGAYIT  105 (458)
T ss_pred             HHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCCCCCchHHHHHHHcCCcEE
Confidence            67899999999999999997753     1234555676442  22345567899998874111   11222110 00   


Q ss_pred             cc--c-cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcE
Q psy755           68 DG--I-LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        68 ~~--l-~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      .+  + ....+...+-|-.|+++..+..-+...+...|...
T Consensus       106 s~~e~~~~~~~~~vIaITGTnGKTTT~~ll~~iL~~~g~~~  146 (458)
T PRK01710        106 SEMEEFIKYCPAKVFGVTGSDGKTTTTTLIYEMLKEEGYKT  146 (458)
T ss_pred             echHHhhhhcCCCEEEEECCCCHHHHHHHHHHHHHhCCCCE
Confidence            01  1 11111123335566667777777778887766543

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=94.16  E-value=0.25  Score=37.26  Aligned_cols=31  Identities=19%  Similarity=0.463  Sum_probs=26.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      ||..+++.|++.|++|++.+|++++.+.+.+
T Consensus        18 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   48 (263)
T PRK06200         18 IGRALVERFLAEGARVAVLERSAEKLASLRQ   48 (263)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5899999999999999999999887766544

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=94.14  E-value=0.078  Score=39.57  Aligned_cols=74  Identities=26%  Similarity=0.366  Sum_probs=45.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC-CCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA-KPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l-~~~~i   79 (183)
                      ||.++|+.|++.|++|++.+|++++.+...+.       +.+-. ..+++.+-+.+...++.++   +.+.... ..=++
T Consensus         8 iG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~-------l~~~~-~~~~~~~D~~~~~~v~~~~---~~~~~~~~g~iD~   76 (241)
T PF13561_consen    8 IGRAIARALAEEGANVILTDRNEEKLADALEE-------LAKEY-GAEVIQCDLSDEESVEALF---DEAVERFGGRIDI   76 (241)
T ss_dssp             HHHHHHHHHHHTTEEEEEEESSHHHHHHHHHH-------HHHHT-TSEEEESCTTSHHHHHHHH---HHHHHHHCSSESE
T ss_pred             hHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-------HHHHc-CCceEeecCcchHHHHHHH---HHHHhhcCCCeEE
Confidence            58999999999999999999999974332211       11101 1334444455666666665   5555554 44455


Q ss_pred             EEeccC
Q psy755           80 VIDSST   85 (183)
Q Consensus        80 iid~s~   85 (183)
                      +|++..
T Consensus        77 lV~~a~   82 (241)
T PF13561_consen   77 LVNNAG   82 (241)
T ss_dssp             EEEEEE
T ss_pred             EEeccc
Confidence            665443

...

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.08  E-value=0.13  Score=40.17  Aligned_cols=56  Identities=18%  Similarity=0.294  Sum_probs=40.5

Q ss_pred             CcHHHHHHHHhCC--CcEEEEcCCchhHHHHHHc--------C-Ccc--cCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNG--HDVIVYDKNTDASQTLAKE--------G-ANM--ALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g--~~V~~~~~~~~~~~~~~~~--------g-~~~--~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|.++|..|+..|  .+++++|+++++++.....        . ...  .++ .+.+++||+||++...+
T Consensus         9 VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~~aDiVIitag~p   77 (300)
T cd00300           9 VGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAADADIVVITAGAP   77 (300)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhCCCCEEEEcCCCC
Confidence            4889999999888  4899999999876554332        1 111  233 46789999999999653

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.08  E-value=0.21  Score=41.27  Aligned_cols=104  Identities=19%  Similarity=0.226  Sum_probs=58.6

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEec--CChH-----HHHHHhcCC----c--
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISML--PASQ-----DVLDAYDGS----D--   68 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~v--p~~~-----~~~~v~~~~----~--   68 (183)
                      |.+.|+.|.+.|++|.++|+.+.....+.+.|+.......+.+.++|+||.+-  |+..     .+.......    .  
T Consensus        21 G~~~a~~l~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~~~d~vv~sp~i~~~~~~~~~~v~~a~~~gi~i~~~~  100 (460)
T PRK01390         21 GLATARALVAGGAEVIAWDDNPASRAKAAAAGITTADLRTADWSGFAALVLSPGVPLTHPKPHWVVDLARAAGVEVIGDI  100 (460)
T ss_pred             HHHHHHHHHHCCCEEEEECCChhhHHHHHhcCccccCCChhHHcCCCEEEECCCCCccCCcccHHHHHHHHcCCcEEeHH
Confidence            67889999999999999997765444455557654332223456899888633  2211     122221000    1  


Q ss_pred             ccc-ccCC----CCcE-EEeccCCCchhHHHHHHHHHhcCCcE
Q psy755           69 GIL-KHAK----PGVI-VIDSSTVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        69 ~l~-~~l~----~~~i-iid~s~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      ++. ..++    +.++ -|-.|+++..+..-+...+...|..+
T Consensus       101 ~~~~~~~~~~~~~~~vI~VTGT~GKTTTt~ll~~iL~~~g~~~  143 (460)
T PRK01390        101 ELFCRERRAHAPDAPFIAITGTNGKSTTTALIAHILREAGRDV  143 (460)
T ss_pred             HHHHHHhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhcCCCe
Confidence            111 1111    2233 34555667777777777777766543

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.07  E-value=0.42  Score=32.72  Aligned_cols=104  Identities=21%  Similarity=0.242  Sum_probs=60.6

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc--------CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE--------GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      +|..+++.|++.|+ +++++|.+.-....+...        |-...+...+.++  +.++-+...+.......       
T Consensus        10 lGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~~~-------   82 (143)
T cd01483          10 LGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISEDN-------   82 (143)
T ss_pred             HHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecChhh-------
Confidence            48899999999998 799998775433333221        2111222222221  23444444433211111       


Q ss_pred             ccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccC
Q psy755           70 ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG  112 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~  112 (183)
                      ....+.+-++|++++.. +.....+.+...+.+..|+++...+
T Consensus        83 ~~~~~~~~diVi~~~d~-~~~~~~l~~~~~~~~i~~i~~~~~g  124 (143)
T cd01483          83 LDDFLDGVDLVIDAIDN-IAVRRALNRACKELGIPVIDAGGLG  124 (143)
T ss_pred             HHHHhcCCCEEEECCCC-HHHHHHHHHHHHHcCCCEEEEcCCC
Confidence            12345567888988876 4455677778888899999976655

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06139 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.23  Score=39.25  Aligned_cols=30  Identities=20%  Similarity=0.437  Sum_probs=26.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.
T Consensus        19 IG~aia~~la~~G~~Vvl~~R~~~~l~~~~   48 (330)
T PRK06139         19 IGQATAEAFARRGARLVLAARDEEALQAVA   48 (330)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            589999999999999999999998876554

>PRK08862 short chain dehydrogenase; Provisional

Probab=94.05  E-value=0.24  Score=36.79  Aligned_cols=30  Identities=17%  Similarity=0.358  Sum_probs=26.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.
T Consensus        17 IG~aia~~la~~G~~V~~~~r~~~~l~~~~   46 (227)
T PRK08862         17 LGRTISCHFARLGATLILCDQDQSALKDTY   46 (227)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            589999999999999999999998876654

>PRK05867 short chain dehydrogenase; Provisional

Probab=93.97  E-value=0.2  Score=37.57  Aligned_cols=30  Identities=27%  Similarity=0.442  Sum_probs=26.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.
T Consensus        21 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   50 (253)
T PRK05867         21 IGKRVALAYVEAGAQVAIAARHLDALEKLA   50 (253)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            589999999999999999999988766554

>PRK06182 short chain dehydrogenase; Validated

Probab=93.96  E-value=0.36  Score=36.67  Aligned_cols=30  Identities=30%  Similarity=0.375  Sum_probs=26.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        15 iG~~la~~l~~~G~~V~~~~r~~~~l~~~~   44 (273)
T PRK06182         15 IGKATARRLAAQGYTVYGAARRVDKMEDLA   44 (273)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988776554

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=93.94  E-value=0.17  Score=37.09  Aligned_cols=22  Identities=36%  Similarity=0.582  Sum_probs=20.4

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKN   22 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~   22 (183)
                      ||..+|..|++.|+ +++++|.+
T Consensus        32 lGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        32 LGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHHHHHHHHcCCCEEEEECCC
Confidence            68999999999999 69999998

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=93.93  E-value=0.2  Score=39.37  Aligned_cols=56  Identities=18%  Similarity=0.265  Sum_probs=39.4

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc---------CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE---------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      .|.++|..|+..|.  +++++|+++++++.....         ......+..+.+++||+||++.-.
T Consensus        17 vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~   83 (315)
T PRK00066         17 VGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGA   83 (315)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCC
Confidence            37889999998888  899999998875433221         222222344568999999998754

>PRK07478 short chain dehydrogenase; Provisional

Probab=93.82  E-value=0.27  Score=36.85  Aligned_cols=30  Identities=20%  Similarity=0.350  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        18 iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~   47 (254)
T PRK07478         18 IGRAAAKLFAREGAKVVVGARRQAELDQLV   47 (254)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766554

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.72  E-value=0.36  Score=39.67  Aligned_cols=103  Identities=17%  Similarity=0.254  Sum_probs=58.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc-hhH----HHHHHcCCcc--cCCHHHHhccCCEEEEecCChHHHHHHhcC-Ccc---
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT-DAS----QTLAKEGANM--ALSLSTLASGAEFIISMLPASQDVLDAYDG-SDG---   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~-~~~----~~~~~~g~~~--~~~~~~~~~~adiVi~~vp~~~~~~~v~~~-~~~---   69 (183)
                      +|.++|+.|++.|++|+++|++. +..    +++.+.|+..  .+...+....+|+||.+.-....-+.+... ..+   
T Consensus        16 ~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~~~~~~~~~~a~~~~i~~   95 (450)
T PRK14106         16 SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGVPLDSPPVVQAHKKGIEV   95 (450)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCCCCCCHHHHHHHHCCCcE
Confidence            47899999999999999999875 333    3333335432  223334557899999987432211111000 000   


Q ss_pred             ------ccccCCCCcEEEeccCCCchhHHHHHHHHHhcCC
Q psy755           70 ------ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        70 ------l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~  103 (183)
                            +....+...+-|-.|+++..+..-+...+...|.
T Consensus        96 ~~~~~~~~~~~~~~vI~ITGS~GKTTt~~~l~~iL~~~g~  135 (450)
T PRK14106         96 IGEVELAYRFSKAPIVAITGTNGKTTTTTLLGEIFKNAGR  135 (450)
T ss_pred             EeHHHHHHhhcCCCEEEEeCCCchHHHHHHHHHHHHHcCC
Confidence                  1111222223355556677777777777776553

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=93.72  E-value=0.13  Score=39.30  Aligned_cols=55  Identities=25%  Similarity=0.424  Sum_probs=38.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--ALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|++.|++|++.+|++...+.....+...  .....+.+.++|+||-+..
T Consensus        10 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~   66 (292)
T TIGR01777        10 IGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAG   66 (292)
T ss_pred             hhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCC
Confidence            589999999999999999999887654322121111  1234456678999998874

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=93.72  E-value=0.27  Score=36.78  Aligned_cols=30  Identities=33%  Similarity=0.496  Sum_probs=25.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        16 iG~~la~~l~~~g~~v~~~~r~~~~~~~~~   45 (258)
T PRK12429         16 IGLEIALALAKEGAKVVIADLNDEAAAAAA   45 (258)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            488999999999999999999988766543

>PRK08265 short chain dehydrogenase; Provisional

Probab=93.71  E-value=0.31  Score=36.82  Aligned_cols=31  Identities=29%  Similarity=0.511  Sum_probs=26.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+
T Consensus        18 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   48 (261)
T PRK08265         18 IGAAVARALVAAGARVAIVDIDADNGAAVAA   48 (261)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5899999999999999999999877665543

>KOG1502|consensus

Probab=93.71  E-value=0.15  Score=40.06  Aligned_cols=54  Identities=19%  Similarity=0.187  Sum_probs=40.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHH---HHHc------------CCcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQT---LAKE------------GANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~---~~~~------------g~~~~~~~~~~~~~adiVi~~v   54 (183)
                      +|+-|...|++.||+|.+.-|+++.-+.   +.+.            .+...++..+++++||.||=+-
T Consensus        18 Igswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH~A   86 (327)
T KOG1502|consen   18 IGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFHTA   86 (327)
T ss_pred             HHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEEeC
Confidence            4788999999999999999999987333   3332            1233457788999999999665

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=93.69  E-value=0.2  Score=38.32  Aligned_cols=56  Identities=13%  Similarity=0.045  Sum_probs=37.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC----CcccCCHHHHh------cc-CCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG----ANMALSLSTLA------SG-AEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g----~~~~~~~~~~~------~~-adiVi~~vp~   56 (183)
                      +|+.+++.|.+.|++|.+..|++++........    ....+++.+++      +. +|.|+++.|.
T Consensus        11 iG~~vv~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~   77 (285)
T TIGR03649        11 TASRIARLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP   77 (285)
T ss_pred             HHHHHHHHHHhCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence            488999999999999999999987543210001    11122344455      45 8999988764

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.67  E-value=1  Score=37.72  Aligned_cols=52  Identities=23%  Similarity=0.249  Sum_probs=34.9

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch--hHHHHHHc--CCccc--CCHHHHhccCCEEEEe
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD--ASQTLAKE--GANMA--LSLSTLASGAEFIISM   53 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~--~~~~~~~~--g~~~~--~~~~~~~~~adiVi~~   53 (183)
                      |.++|+.|.+.|++|+++|....  ..+.+.+.  |+...  ....+.+.++|+||..
T Consensus        19 G~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~d~vv~s   76 (498)
T PRK02006         19 GLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFVGGPFDPALLDGVDLVALS   76 (498)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEEeCCCchhHhcCCCEEEEC
Confidence            77899999999999999996543  22344444  33321  1234556678988886

>PRK06180 short chain dehydrogenase; Provisional

Probab=93.62  E-value=0.33  Score=37.01  Aligned_cols=31  Identities=23%  Similarity=0.358  Sum_probs=26.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+
T Consensus        16 iG~~la~~l~~~G~~V~~~~r~~~~~~~l~~   46 (277)
T PRK06180         16 FGRALAQAALAAGHRVVGTVRSEAARADFEA   46 (277)
T ss_pred             HHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh
Confidence            5899999999999999999999887766543

>PRK11579 putative oxidoreductase; Provisional

Probab=93.57  E-value=1.1  Score=35.51  Aligned_cols=84  Identities=18%  Similarity=0.196  Sum_probs=53.8

Q ss_pred             CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE-ecc-CC
Q psy755           13 GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI-DSS-TV   86 (183)
Q Consensus        13 g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii-d~s-~~   86 (183)
                      +.+++ ++|+++++..  .+. +...+++.+++++  +.|+|++++|...+.+.++       ..+..|+.|+ +-- ..
T Consensus        29 ~~~l~av~d~~~~~~~--~~~~~~~~~~~~~ell~~~~vD~V~I~tp~~~H~~~~~-------~al~aGkhVl~EKPla~   99 (346)
T PRK11579         29 GLELAAVSSSDATKVK--ADWPTVTVVSEPQHLFNDPNIDLIVIPTPNDTHFPLAK-------AALEAGKHVVVDKPFTV   99 (346)
T ss_pred             CCEEEEEECCCHHHHH--hhCCCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHH-------HHHHCCCeEEEeCCCCC
Confidence            56766 5799887643  222 3456778999986  5799999999877655553       4567788766 211 12


Q ss_pred             CchhHHHHHHHHHhcCCcE
Q psy755           87 DPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        87 ~~~~~~~~~~~~~~~g~~~  105 (183)
                      .......+.+..++.|..+
T Consensus       100 t~~ea~~l~~~a~~~g~~l  118 (346)
T PRK11579        100 TLSQARELDALAKSAGRVL  118 (346)
T ss_pred             CHHHHHHHHHHHHHhCCEE
Confidence            3344556666666666553

>PRK08643 acetoin reductase; Validated

Probab=93.54  E-value=0.32  Score=36.47  Aligned_cols=30  Identities=30%  Similarity=0.550  Sum_probs=25.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+++.
T Consensus        14 iG~~la~~l~~~G~~v~~~~r~~~~~~~~~   43 (256)
T PRK08643         14 IGFAIAKRLVEDGFKVAIVDYNEETAQAAA   43 (256)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999987765543

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=93.53  E-value=0.2  Score=39.30  Aligned_cols=68  Identities=21%  Similarity=0.259  Sum_probs=42.1

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      |..+.+.|.++.+ ++.....+..+       .  . .+.++..+++|+||+|+|.....+-+    ..+   ...|..|
T Consensus        15 G~eLlrlL~~hp~~~l~~~~s~~~~-------~--~-~~~~~~~~~~DvvFlalp~~~s~~~~----~~~---~~~g~~V   77 (313)
T PRK11863         15 GLQIRERLAGRSDIELLSIPEAKRK-------D--A-AARRELLNAADVAILCLPDDAAREAV----ALI---DNPATRV   77 (313)
T ss_pred             HHHHHHHHhcCCCeEEEEEecCCCC-------c--c-cCchhhhcCCCEEEECCCHHHHHHHH----HHH---HhCCCEE
Confidence            6677888887764 44433322221       0  1 23345557899999999986554333    332   3578999


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      ||.|+.
T Consensus        78 IDlSad   83 (313)
T PRK11863         78 IDASTA   83 (313)
T ss_pred             EECChh
Confidence            999975

>PLN02780 ketoreductase/ oxidoreductase

Probab=93.50  E-value=0.18  Score=39.59  Aligned_cols=30  Identities=20%  Similarity=0.457  Sum_probs=26.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++|+.|++.|++|++.+|++++.+...
T Consensus        65 IG~alA~~La~~G~~Vil~~R~~~~l~~~~   94 (320)
T PLN02780         65 IGKGFAFQLARKGLNLVLVARNPDKLKDVS   94 (320)
T ss_pred             HHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence            589999999999999999999998877654

>PRK07825 short chain dehydrogenase; Provisional

Probab=93.48  E-value=0.36  Score=36.61  Aligned_cols=30  Identities=27%  Similarity=0.288  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        17 iG~~la~~l~~~G~~v~~~~r~~~~~~~~~   46 (273)
T PRK07825         17 IGLATARALAALGARVAIGDLDEALAKETA   46 (273)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            588999999999999999999998876654

>PRK07109 short chain dehydrogenase; Provisional

Probab=93.47  E-value=0.29  Score=38.65  Aligned_cols=74  Identities=20%  Similarity=0.329  Sum_probs=44.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEE--EecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFII--SMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi--~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+.       +.+  ..+++.+  .=+.+..+++.++   +.+...+.+=+
T Consensus        20 IG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~-------l~~--~g~~~~~v~~Dv~d~~~v~~~~---~~~~~~~g~iD   87 (334)
T PRK07109         20 VGRATARAFARRGAKVVLLARGEEGLEALAAE-------IRA--AGGEALAVVADVADAEAVQAAA---DRAEEELGPID   87 (334)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHH--cCCcEEEEEecCCCHHHHHHHH---HHHHHHCCCCC
Confidence            58999999999999999999998876654321       111  1123322  2334455555554   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        88 ~lInnAg~   95 (334)
T PRK07109         88 TWVNNAMV   95 (334)
T ss_pred             EEEECCCc
Confidence            66666543

>PRK05866 short chain dehydrogenase; Provisional

Probab=93.43  E-value=0.3  Score=37.81  Aligned_cols=30  Identities=20%  Similarity=0.402  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        52 IG~~la~~La~~G~~Vi~~~R~~~~l~~~~   81 (293)
T PRK05866         52 IGEAAAEQFARRGATVVAVARREDLLDAVA   81 (293)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            589999999999999999999988766554

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.38  E-value=1.6  Score=36.36  Aligned_cols=104  Identities=18%  Similarity=0.231  Sum_probs=60.4

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHH-HHcCCcccC--CHHHHhccCCEEEEec--CChHH-HHHHhc-C-----Ccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTL-AKEGANMAL--SLSTLASGAEFIISML--PASQD-VLDAYD-G-----SDG   69 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~-~~~g~~~~~--~~~~~~~~adiVi~~v--p~~~~-~~~v~~-~-----~~~   69 (183)
                      |.++|+.|.+.|++|+++|++....... .+.|+....  ...+.+.++|+||.+-  |+..+ +...-. +     .-+
T Consensus        27 G~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~~~e  106 (473)
T PRK00141         27 GRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQLDSFSLVVTSPGWRPDSPLLVDAQSQGLEVIGDVE  106 (473)
T ss_pred             HHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCCCCCCHHHHHHHHCCCceeeHHH
Confidence            7789999999999999999877654443 334665432  2345567899998773  33322 222110 0     001


Q ss_pred             cc------ccCC-CCc-EEEeccCCCchhHHHHHHHHHhcCCcE
Q psy755           70 IL------KHAK-PGV-IVIDSSTVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        70 l~------~~l~-~~~-iiid~s~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      +.      ..+. +.+ +-|-.|+++..+..-+...+...|...
T Consensus       107 l~~~~~~~~~~~~~~~vIaVTGTnGKTTTt~ml~~iL~~~g~~~  150 (473)
T PRK00141        107 LAWRLDQAGVFGEPRTWLAVTGTNGKTTTTAMLAAMMQEGGFAA  150 (473)
T ss_pred             HHHHhhhhhccCCCCCEEEEeCCCcHHHHHHHHHHHHHhcCCcE
Confidence            10      0011 223 335566667777777788887766543

>TIGR01082 murC UDP-N-acetylmuramate--alanine ligase

Probab=93.35  E-value=0.79  Score=37.78  Aligned_cols=102  Identities=14%  Similarity=0.219  Sum_probs=59.8

Q ss_pred             cHH-HHHHHHhCCCcEEEEcCCch-hHHHHHHcCCcccC-CHHHHhccCCEEEEec--CCh-HHHHHHhc------CCcc
Q psy755            2 GSH-MARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMAL-SLSTLASGAEFIISML--PAS-QDVLDAYD------GSDG   69 (183)
Q Consensus         2 G~~-iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~-~~~~~~~~adiVi~~v--p~~-~~~~~v~~------~~~~   69 (183)
                      |.+ +|+.|.+.|++|+++|.++. ..+.+.+.|+.... ...+.++++|+||..-  |.. ..++....      +.-+
T Consensus        11 Gm~~la~~L~~~G~~v~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~spgi~~~~p~~~~a~~~~i~v~~~~e   90 (448)
T TIGR01082        11 GMSGIAEILLNRGYQVSGSDIAENATTKRLEALGIPIYIGHSAENLDDADVVVVSAAIKDDNPEIVEAKERGIPVIRRAE   90 (448)
T ss_pred             HHHHHHHHHHHCCCeEEEECCCcchHHHHHHHCcCEEeCCCCHHHCCCCCEEEECCCCCCCCHHHHHHHHcCCceEeHHH
Confidence            565 89999999999999997654 33445555765432 2234466799988764  322 22222210      0011


Q ss_pred             cc-ccCCCC-cEEEeccCCCchhHHHHHHHHHhcCC
Q psy755           70 IL-KHAKPG-VIVIDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        70 l~-~~l~~~-~iiid~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      +. ..+++. .+-|-.|+.+..+..-+...+...|.
T Consensus        91 l~~~~~~~~~~IaITGTnGKTTTt~ll~~iL~~~g~  126 (448)
T TIGR01082        91 MLAELMRFRHSIAVAGTHGKTTTTAMIAVILKEAGL  126 (448)
T ss_pred             HHHHHHhcCcEEEEECCCChHHHHHHHHHHHHHcCC
Confidence            11 222222 34466667778888777888887774

UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by TIGR01081.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=93.34  E-value=0.37  Score=36.14  Aligned_cols=30  Identities=27%  Similarity=0.431  Sum_probs=25.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        23 IG~~la~~l~~~G~~v~~~~r~~~~~~~~~   52 (256)
T PRK06124         23 LGFEIARALAGAGAHVLVNGRNAATLEAAV   52 (256)
T ss_pred             HHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence            588999999999999999999987665543

>PRK05693 short chain dehydrogenase; Provisional

Probab=93.34  E-value=0.53  Score=35.75  Aligned_cols=30  Identities=20%  Similarity=0.365  Sum_probs=25.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        13 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~   42 (274)
T PRK05693         13 IGRALADAFKAAGYEVWATARKAEDVEALA   42 (274)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            588999999999999999999987766554

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=93.32  E-value=0.37  Score=36.29  Aligned_cols=30  Identities=30%  Similarity=0.544  Sum_probs=25.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+...
T Consensus        12 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~   41 (259)
T PRK08340         12 IGFNVARELLKKGARVVISSRNEENLEKAL   41 (259)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>PRK06349 homoserine dehydrogenase; Provisional

Probab=93.31  E-value=0.27  Score=40.31  Aligned_cols=107  Identities=21%  Similarity=0.316  Sum_probs=61.2

Q ss_pred             CcHHHHHHHHhC--------C--CcEE-EEcCCchhHHHHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCC
Q psy755            1 MGSHMARNLLKN--------G--HDVI-VYDKNTDASQTLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         1 mG~~iA~~l~~~--------g--~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      ||+.+++.|.++        |  .+|. ++++++++.+.....+...+++.+++++  +.|+|+.+++........    
T Consensus        14 VG~~~~~~L~~~~~~l~~~~g~~i~l~~V~~~~~~~~~~~~~~~~~~~~d~~~ll~d~~iDvVve~tg~~~~~~~~----   89 (426)
T PRK06349         14 VGSGVVRILEENAEEIAARAGRPIEIKKVAVRDLEKDRGVDLPGILLTTDPEELVNDPDIDIVVELMGGIEPAREL----   89 (426)
T ss_pred             HHHHHHHHHHHhHHHHHHhcCCCEEEEEEEeCChhhccCCCCcccceeCCHHHHhhCCCCCEEEECCCCchHHHHH----
Confidence            466666666443        3  3444 5688877644322123345678888885  479999998764332232    


Q ss_pred             ccccccCCCCcEEEeccCC-CchhHHHHHHHHHhcCCcEE-eecccCC
Q psy755           68 DGILKHAKPGVIVIDSSTV-DPQVPQTLSNLAREKQITFL-DAPVSGG  113 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s~~-~~~~~~~~~~~~~~~g~~~~-~~~~~~~  113 (183)
                        ....+..|+.|+-.... .......+.+..++.|..+. .+.+.++
T Consensus        90 --~~~aL~~GkhVVtaNK~~~a~~~~eL~~lA~~~gv~l~fEasV~gg  135 (426)
T PRK06349         90 --ILKALEAGKHVVTANKALLAVHGAELFAAAEEKGVDLYFEAAVAGG  135 (426)
T ss_pred             --HHHHHHCCCeEEEcCHHHHHHHHHHHHHHHHHcCCcEEEEEEeecc
Confidence              34667899988833221 12233555666666777644 3444443

>PRK07814 short chain dehydrogenase; Provisional

Probab=93.26  E-value=0.35  Score=36.52  Aligned_cols=75  Identities=13%  Similarity=0.207  Sum_probs=43.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+.       +.+.-....++-+-+.+...+..++   +.+...+.+=++|
T Consensus        22 IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~D~~~~~~~~~~~---~~~~~~~~~id~v   91 (263)
T PRK07814         22 LGAAIALAFAEAGADVLIAARTESQLDEVAEQ-------IRAAGRRAHVVAADLAHPEATAGLA---GQAVEAFGRLDIV   91 (263)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhcCCcEEEEEccCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            58899999999999999999998776554332       0000001122223344555555554   4443434344566


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      +++..
T Consensus        92 i~~Ag   96 (263)
T PRK07814         92 VNNVG   96 (263)
T ss_pred             EECCC
Confidence            66654

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=93.20  E-value=0.4  Score=36.01  Aligned_cols=31  Identities=23%  Similarity=0.363  Sum_probs=26.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..+++.|++.|++|++.+|+++..+...+
T Consensus        18 iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~   48 (257)
T PRK07067         18 IGEAVAERYLAEGARVVIADIKPARARLAAL   48 (257)
T ss_pred             HHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence            5899999999999999999999987766543

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=93.19  E-value=0.094  Score=41.66  Aligned_cols=78  Identities=21%  Similarity=0.238  Sum_probs=45.4

Q ss_pred             cHHHHHHHHhCCCc---EEEEcCCchhHHHHHHcCC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHD---VIVYDKNTDASQTLAKEGA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~---V~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |..+.+.|.+++|+   +..+.+.+..-+.+...+.  ...+...+.++++|+||+|+|.....+..    +   .++..
T Consensus        12 G~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~~~~~~~~D~v~~a~g~~~s~~~a----~---~~~~~   84 (339)
T TIGR01296        12 GQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAKIESFEGIDIALFSAGGSVSKEFA----P---KAAKC   84 (339)
T ss_pred             HHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCChHHhcCCCEEEECCCHHHHHHHH----H---HHHHC
Confidence            77899999998885   3344343332222222221  12111123457899999999886543322    2   23457


Q ss_pred             CcEEEeccCC
Q psy755           77 GVIVIDSSTV   86 (183)
Q Consensus        77 ~~iiid~s~~   86 (183)
                      |..|||.|+.
T Consensus        85 G~~VID~ss~   94 (339)
T TIGR01296        85 GAIVIDNTSA   94 (339)
T ss_pred             CCEEEECCHH
Confidence            8889999963

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=93.17  E-value=0.16  Score=43.09  Aligned_cols=55  Identities=22%  Similarity=0.290  Sum_probs=38.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc---------C------C--c--ccC---CHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE---------G------A--N--MAL---SLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~---------g------~--~--~~~---~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|++.|++|++++|+.++.+.+.+.         |      +  .  ...   ++.+.+.++|+||.+..
T Consensus        92 IG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLggiDiVVn~AG  168 (576)
T PLN03209         92 VGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGNASVVICCIG  168 (576)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcCCCEEEEccc
Confidence            58899999999999999999999887654321         1      1  0  111   23345678999998874

>TIGR02415 23BDH acetoin reductases

Probab=93.12  E-value=0.39  Score=35.85  Aligned_cols=76  Identities=22%  Similarity=0.266  Sum_probs=43.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|..+++.|++.|++|++.+|+++..+.+.+.       +.+.-.+...+..=+.++..++.++   .++.+.+.+-.++
T Consensus        12 iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~Dl~~~~~i~~~~---~~~~~~~~~id~v   81 (254)
T TIGR02415        12 IGKGIAERLAKDGFAVAVADLNEETAKETAKE-------INQAGGKAVAYKLDVSDKDQVFSAI---DQAAEKFGGFDVM   81 (254)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhcCCeEEEEEcCCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            58899999999999999999987665544321       0000011222233334555555554   4444444444566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      +++...
T Consensus        82 i~~ag~   87 (254)
T TIGR02415        82 VNNAGV   87 (254)
T ss_pred             EECCCc
Confidence            666544

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07454 short chain dehydrogenase; Provisional

Probab=93.05  E-value=0.41  Score=35.53  Aligned_cols=30  Identities=30%  Similarity=0.452  Sum_probs=25.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        18 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~   47 (241)
T PRK07454         18 IGKATALAFAKAGWDLALVARSQDALEALA   47 (241)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            588999999999999999999987665543

>PRK05876 short chain dehydrogenase; Provisional

Probab=92.98  E-value=0.38  Score=36.79  Aligned_cols=29  Identities=14%  Similarity=0.274  Sum_probs=25.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|.++|+.|++.|++|++.+|+++..+.+
T Consensus        18 IG~ala~~La~~G~~Vv~~~r~~~~l~~~   46 (275)
T PRK05876         18 IGLATGTEFARRGARVVLGDVDKPGLRQA   46 (275)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58999999999999999999998776554

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=92.96  E-value=0.46  Score=35.86  Aligned_cols=31  Identities=26%  Similarity=0.437  Sum_probs=26.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|.++++.|++.|++|++.+|+.++.+.+.+
T Consensus        17 IG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~   47 (262)
T TIGR03325        17 LGRAIVDRFVAEGARVAVLDKSAAGLQELEA   47 (262)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence            6899999999999999999999887766543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=92.96  E-value=0.36  Score=36.28  Aligned_cols=75  Identities=17%  Similarity=0.254  Sum_probs=43.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|..+++.|++.|++|++.+|++++.+...+.       ....-.....+-.-+.++..++..+   .++.+.+.+=+.+
T Consensus        24 IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-------i~~~~~~~~~~~~Dl~d~~~i~~~~---~~~~~~~~~id~v   93 (259)
T PRK08213         24 LGLQIAEALGEAGARVVLSARKAEELEEAAAH-------LEALGIDALWIAADVADEADIERLA---EETLERFGHVDIL   93 (259)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-------HHhcCCeEEEEEccCCCHHHHHHHH---HHHHHHhCCCCEE
Confidence            58899999999999999999998776554321       0000011223333344445555544   4444433344566


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      +++..
T Consensus        94 i~~ag   98 (259)
T PRK08213         94 VNNAG   98 (259)
T ss_pred             EECCC
Confidence            76654

>PRK07063 short chain dehydrogenase; Provisional

Probab=92.90  E-value=0.39  Score=36.12  Aligned_cols=30  Identities=23%  Similarity=0.429  Sum_probs=26.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+...
T Consensus        19 IG~~~a~~l~~~G~~vv~~~r~~~~~~~~~   48 (260)
T PRK07063         19 IGAAIARAFAREGAAVALADLDAALAERAA   48 (260)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766554

>PRK06756 flavodoxin; Provisional

Probab=92.87  E-value=2.2  Score=29.38  Aligned_cols=113  Identities=15%  Similarity=0.082  Sum_probs=60.2

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChH------HHHHHhcCCccccccCCC
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQ------DVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~------~~~~v~~~~~~l~~~l~~   76 (183)
                      ..|+..|.+.|++|.+++....             ... +.+.++|.|++.+|.-.      .+...+   +.+...-.+
T Consensus        20 ~~ia~~l~~~g~~v~~~~~~~~-------------~~~-~~~~~~d~vi~gspt~~~g~~p~~~~~fl---~~l~~~~l~   82 (148)
T PRK06756         20 DHIAGVIRETENEIEVIDIMDS-------------PEA-SILEQYDGIILGAYTWGDGDLPDDFLDFY---DAMDSIDLT   82 (148)
T ss_pred             HHHHHHHhhcCCeEEEeehhcc-------------CCH-HHHhcCCeEEEEeCCCCCCCCcHHHHHHH---HHHhcCCCC
Confidence            4455555555666655543221             012 33568999999987631      234443   333322225


Q ss_pred             CcEEEeccCCC------chhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhc
Q psy755           77 GVIVIDSSTVD------PQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus        77 ~~iiid~s~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g  144 (183)
                      ++.+.-.++..      ......+.+.+.+.|...+..|+.            +-...+++..+.++++.+.+.
T Consensus        83 ~k~~~~fgt~~~~y~~~~~a~~~l~~~l~~~g~~~v~~~~~------------~~~~p~~~d~~~~~~~~~~~~  144 (148)
T PRK06756         83 GKKAAVFGSCDSAYPKYGVAVDILIEKLQERGAAVVLEGLK------------VELTPEDEDVEKCLQFGAEFV  144 (148)
T ss_pred             CCEEEEEeCCCCchHHHHHHHHHHHHHHHHCCCEEcCCCeE------------EecCCCHHHHHHHHHHHHHHH
Confidence            55544333321      244566777777788887764322            111235566677777766653

>PRK07024 short chain dehydrogenase; Provisional

Probab=92.81  E-value=0.52  Score=35.45  Aligned_cols=31  Identities=29%  Similarity=0.461  Sum_probs=26.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+
T Consensus        14 IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~   44 (257)
T PRK07024         14 IGQALAREYARQGATLGLVARRTDALQAFAA   44 (257)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5899999999999999999999887665543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=92.80  E-value=0.39  Score=36.01  Aligned_cols=30  Identities=30%  Similarity=0.508  Sum_probs=25.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|+++|++|++.+|++++.+.+.
T Consensus        19 iG~~la~~l~~~G~~v~~~~r~~~~~~~~~   48 (262)
T PRK13394         19 IGKEIALELARAGAAVAIADLNQDGANAVA   48 (262)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence            588999999999999999999997765554

>PRK12939 short chain dehydrogenase; Provisional

Probab=92.79  E-value=0.44  Score=35.40  Aligned_cols=30  Identities=27%  Similarity=0.384  Sum_probs=25.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|.+.|++|++.+|++++.+...
T Consensus        19 iG~~la~~l~~~G~~v~~~~r~~~~~~~~~   48 (250)
T PRK12939         19 LGAAFAEALAEAGATVAFNDGLAAEARELA   48 (250)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            588999999999999999999988766543

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=92.72  E-value=0.34  Score=37.94  Aligned_cols=53  Identities=17%  Similarity=0.243  Sum_probs=35.3

Q ss_pred             cHHHHHHHHhCCC--cEEEEcCCc--hhHHHHH--------HcCC--c--ccCCHHHHhccCCEEEEecC
Q psy755            2 GSHMARNLLKNGH--DVIVYDKNT--DASQTLA--------KEGA--N--MALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         2 G~~iA~~l~~~g~--~V~~~~~~~--~~~~~~~--------~~g~--~--~~~~~~~~~~~adiVi~~vp   55 (183)
                      |..++..|+..|+  +|+++|+++  ++++...        ..+.  .  ...+ .+.+++||+||++..
T Consensus        13 G~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiViitag   81 (309)
T cd05294          13 GSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVIITAG   81 (309)
T ss_pred             HHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEEecC
Confidence            7788999999887  599999955  4332111        1121  1  2234 455899999999996

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK12828 short chain dehydrogenase; Provisional

Probab=92.72  E-value=0.73  Score=33.88  Aligned_cols=73  Identities=14%  Similarity=0.059  Sum_probs=42.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|..+++.|++.|++|++.+|++++.....+.       +.  ....+++..-+.+...++.++   +++.....+-..|
T Consensus        19 iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-------~~--~~~~~~~~~D~~~~~~~~~~~---~~~~~~~~~~d~v   86 (239)
T PRK12828         19 LGRATAAWLAARGARVALIGRGAAPLSQTLPG-------VP--ADALRIGGIDLVDPQAARRAV---DEVNRQFGRLDAL   86 (239)
T ss_pred             HhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH-------Hh--hcCceEEEeecCCHHHHHHHH---HHHHHHhCCcCEE
Confidence            58899999999999999999988765443221       00  012344444445555555554   4443333333455


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      ++...
T Consensus        87 i~~ag   91 (239)
T PRK12828         87 VNIAG   91 (239)
T ss_pred             EECCc
Confidence            55543

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.69  E-value=2.2  Score=35.08  Aligned_cols=24  Identities=38%  Similarity=0.524  Sum_probs=20.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD   24 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~   24 (183)
                      +|.++|+.|++.|++|+++|.++.
T Consensus        16 ~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308         16 TGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCCC
Confidence            378889999999999999987654

>PRK06720 hypothetical protein; Provisional

Probab=92.65  E-value=0.62  Score=33.10  Aligned_cols=29  Identities=34%  Similarity=0.456  Sum_probs=24.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|.+++..|.+.|++|++++|+.+..+..
T Consensus        28 IG~aia~~l~~~G~~V~l~~r~~~~~~~~   56 (169)
T PRK06720         28 IGRNTALLLAKQGAKVIVTDIDQESGQAT   56 (169)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            58899999999999999999987765443

>PRK08589 short chain dehydrogenase; Validated

Probab=92.63  E-value=0.6  Score=35.53  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=42.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|+ +..+...+.       +.+.-.+...+.+=+.+...+..++   +.+...+.+=.++
T Consensus        18 IG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~-------~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~~~~~g~id~l   86 (272)
T PRK08589         18 IGQASAIALAQEGAYVLAVDIA-EAVSETVDK-------IKSNGGKAKAYHVDISDEQQVKDFA---SEIKEQFGRVDVL   86 (272)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHH-------HHhcCCeEEEEEeecCCHHHHHHHH---HHHHHHcCCcCEE
Confidence            5899999999999999999998 554443221       0000011223333344555555554   4444433333456


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus        87 i~~Ag~   92 (272)
T PRK08589         87 FNNAGV   92 (272)
T ss_pred             EECCCC
Confidence            665543

>PRK07774 short chain dehydrogenase; Provisional

Probab=92.60  E-value=0.44  Score=35.52  Aligned_cols=29  Identities=28%  Similarity=0.527  Sum_probs=24.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|+++..+.+
T Consensus        18 iG~~la~~l~~~g~~vi~~~r~~~~~~~~   46 (250)
T PRK07774         18 IGQAYAEALAREGASVVVADINAEGAERV   46 (250)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58999999999999999999998765544

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=92.56  E-value=0.53  Score=35.28  Aligned_cols=29  Identities=21%  Similarity=0.394  Sum_probs=25.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|++++.+.+
T Consensus        22 iG~~ia~~l~~~G~~V~~~~r~~~~~~~~   50 (255)
T PRK07523         22 IGYALAEGLAQAGAEVILNGRDPAKLAAA   50 (255)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            58899999999999999999998766544

>PRK03803 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=92.55  E-value=1.1  Score=36.82  Aligned_cols=111  Identities=20%  Similarity=0.172  Sum_probs=63.0

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch--hHHHHHHc--CCcccC--CHHHHhccCCEEEEec--CChHH-HHHHhc-C-----
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD--ASQTLAKE--GANMAL--SLSTLASGAEFIISML--PASQD-VLDAYD-G-----   66 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~--~~~~~~~~--g~~~~~--~~~~~~~~adiVi~~v--p~~~~-~~~v~~-~-----   66 (183)
                      |.++|+.|.+.|++|+++|..+.  ..+.+.+.  |+....  ...+.+.++|+||..-  |+..+ +..... +     
T Consensus        18 G~s~a~~L~~~G~~v~~~D~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~d~vV~sp~i~~~~p~~~~a~~~~i~i~~   97 (448)
T PRK03803         18 GLSVVRFLARQGIPFAVMDSREQPPGLDTLAREFPDVELRCGGFDCELLVQASEIIISPGLALDTPALRAAAAMGIEVIG   97 (448)
T ss_pred             HHHHHHHHHhCCCeEEEEeCCCCchhHHHHHhhcCCcEEEeCCCChHHhcCCCEEEECCCCCCCCHHHHHHHHCCCcEEE
Confidence            77899999999999999997643  22345442  654421  2344567899887764  22222 222110 0     


Q ss_pred             CccccccCCCCc-EEEeccCCCchhHHHHHHHHHhcCCcEEeecccC
Q psy755           67 SDGILKHAKPGV-IVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG  112 (183)
Q Consensus        67 ~~~l~~~l~~~~-iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~  112 (183)
                      .-++...+.+.. +-|-.|+.+..+..-+...+...|..+..+...+
T Consensus        98 ~~el~~~~~~~~~I~VTGT~GKTTTt~li~~iL~~~g~~~~~ggnig  144 (448)
T PRK03803         98 DIELFAREAKAPVIAITGSNGKSTVTTLVGEMAKAAGKRVAVGGNIG  144 (448)
T ss_pred             HHHHHHHhcCCCEEEEECCCcHHHHHHHHHHHHHhcCCCeEEecCcC
Confidence            001222222333 3456667777788888888887776554443333

>PRK05854 short chain dehydrogenase; Provisional

Probab=92.46  E-value=0.73  Score=35.98  Aligned_cols=30  Identities=27%  Similarity=0.413  Sum_probs=26.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      ||..+|+.|++.|++|++.+|+.++.+.+.
T Consensus        26 IG~~~a~~La~~G~~Vil~~R~~~~~~~~~   55 (313)
T PRK05854         26 LGLGLARRLAAAGAEVILPVRNRAKGEAAV   55 (313)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766554

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=92.46  E-value=0.54  Score=35.22  Aligned_cols=29  Identities=21%  Similarity=0.413  Sum_probs=25.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|.++++.|++.|++|++.+|++++.+.+
T Consensus        21 iG~~ia~~L~~~G~~vvl~~r~~~~~~~~   49 (254)
T PRK08085         21 IGFLLATGLAEYGAEIIINDITAERAELA   49 (254)
T ss_pred             HHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            58999999999999999999998776554

>PRK10569 NAD(P)H-dependent FMN reductase; Provisional

Probab=92.45  E-value=2.4  Score=30.76  Aligned_cols=134  Identities=10%  Similarity=-0.030  Sum_probs=63.8

Q ss_pred             HHHHHHHhCCCcEEEEcCCchhHHHHHHcC--CcccCCHHHHhccCCEEEEecCCh-----HHHHHHhcCCccccccCCC
Q psy755            4 HMARNLLKNGHDVIVYDKNTDASQTLAKEG--ANMALSLSTLASGAEFIISMLPAS-----QDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~adiVi~~vp~~-----~~~~~v~~~~~~l~~~l~~   76 (183)
                      .++..+.+.|++|..+|...-..+.+....  ........+.+.+||.||+++|.-     ..+|..+   +.+....-.
T Consensus        22 ~~~~~l~~~g~ev~~idL~~l~~~~~~~~~~~~~~~~~~~~~i~~AD~iIi~tP~Y~~s~pg~LKn~i---D~l~~~~l~   98 (191)
T PRK10569         22 YAREWLNGLGVEVYHWNLQNFAPEDLLYARFDSPALKTFTEQLAQADGLIVATPVYKASFSGALKTLL---DLLPERALE   98 (191)
T ss_pred             HHHHHHHhCCCEEEEEEccCCChHHHHhccCCCHHHHHHHHHHHHCCEEEEECCccCCCCCHHHHHHH---HhCChhhhC
Confidence            345556678999887765433333332211  112223445678999999999843     3355554   333222224


Q ss_pred             CcEEE-eccCCCchhHHHHH----HHHHhcCCcEEeecccCCHHHHh-cCceEEEecCCHHHHHHHHHHHHHh
Q psy755           77 GVIVI-DSSTVDPQVPQTLS----NLAREKQITFLDAPVSGGTKAAQ-EATLTFMVGGDKSSLEKAKPILKCM  143 (183)
Q Consensus        77 ~~iii-d~s~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~l~~~~  143 (183)
                      ++.+. -.+++.+.....+.    ..+...+...+..+++....... ....-.   -+++..++++.+++.+
T Consensus        99 ~K~v~iiat~G~~~~~~~~~~~lr~~l~~l~a~~~~~~~~~~~~~~~~~d~~~~---~d~~~~~rl~~~~~~~  168 (191)
T PRK10569         99 HKVVLPLATGGSVAHMLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHQPQ---FTPNLQTRLDEALETF  168 (191)
T ss_pred             CCEEEEEEecCCchhHHHHHHHHHHHHHHcCCeecCceEEEechhhhccccccc---cCHHHHHHHHHHHHHH
Confidence            55433 33334555444443    34444455544433333222111 010001   1556666666655555

>KOG4230|consensus

Probab=92.43  E-value=0.32  Score=41.10  Aligned_cols=42  Identities=26%  Similarity=0.322  Sum_probs=33.0

Q ss_pred             cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           37 ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        37 ~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      +.++.+.+.++|+||.++--++.++.         +++++|.++||++..+
T Consensus       196 T~~lae~v~~ADIvIvAiG~PefVKg---------dWiKpGavVIDvGINy  237 (935)
T KOG4230|consen  196 TRNLAEKVSRADIVIVAIGQPEFVKG---------DWIKPGAVVIDVGINY  237 (935)
T ss_pred             CccHHHHhccCCEEEEEcCCcceeec---------ccccCCcEEEEccccc
Confidence            34678889999999999977665443         4688999999998643

>PRK06196 oxidoreductase; Provisional

Probab=92.39  E-value=0.56  Score=36.57  Aligned_cols=30  Identities=27%  Similarity=0.420  Sum_probs=25.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+...
T Consensus        38 IG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~   67 (315)
T PRK06196         38 LGLETTRALAQAGAHVIVPARRPDVAREAL   67 (315)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional

Probab=92.33  E-value=0.81  Score=37.85  Aligned_cols=102  Identities=18%  Similarity=0.178  Sum_probs=60.6

Q ss_pred             cHH-HHHHHHhCCCcEEEEcCCch-hHHHHHHcCCccc-CCHHHHhccCCEEEEec--CChH-HHHHHh------cCCcc
Q psy755            2 GSH-MARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMA-LSLSTLASGAEFIISML--PASQ-DVLDAY------DGSDG   69 (183)
Q Consensus         2 G~~-iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~-~~~~~~~~~adiVi~~v--p~~~-~~~~v~------~~~~~   69 (183)
                      |.+ +|+.|.+.|++|+++|.++. ..+.+.+.|+... ....+.++++|+||.+-  |... .++...      .+..+
T Consensus        19 G~s~~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~d~vv~spgi~~~~~~~~~a~~~~i~i~~~~e   98 (461)
T PRK00421         19 GMSGLAEVLLNLGYKVSGSDLKESAVTQRLLELGAIIFIGHDAENIKDADVVVYSSAIPDDNPELVAARELGIPVVRRAE   98 (461)
T ss_pred             hHHHHHHHHHhCCCeEEEECCCCChHHHHHHHCCCEEeCCCCHHHCCCCCEEEECCCCCCCCHHHHHHHHCCCcEEeHHH
Confidence            677 79999999999999997654 3344555566542 22344567899988765  2221 222211      00111


Q ss_pred             ccccC-CC-CcEEEeccCCCchhHHHHHHHHHhcCC
Q psy755           70 ILKHA-KP-GVIVIDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        70 l~~~l-~~-~~iiid~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      +...+ .+ ..+-|-.|+++..+..-+...++..|.
T Consensus        99 ~~~~~~~~~~~I~ITGTnGKTTTt~ll~~iL~~~g~  134 (461)
T PRK00421         99 MLAELMRFRTSIAVAGTHGKTTTTSLLAHVLAEAGL  134 (461)
T ss_pred             HHHHHHccCcEEEEECCCCHHHHHHHHHHHHHhcCC
Confidence            22222 22 234466667788888888888877764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=92.30  E-value=0.62  Score=34.73  Aligned_cols=31  Identities=29%  Similarity=0.411  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..+++.|++.|++|++.+|+++..+.+.+
T Consensus        13 lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~   43 (255)
T TIGR01963        13 IGLAIALALAAAGANVVVNDLGEAGAEAAAK   43 (255)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            4889999999999999999999877665543

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06179 short chain dehydrogenase; Provisional

Probab=92.29  E-value=0.46  Score=35.94  Aligned_cols=68  Identities=19%  Similarity=0.296  Sum_probs=42.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|..+++.|++.|++|++.+|++++.+..               .+..++-.=+.++..++.++   +.+.....+-+++
T Consensus        16 iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---------------~~~~~~~~D~~d~~~~~~~~---~~~~~~~g~~d~l   77 (270)
T PRK06179         16 IGRATAEKLARAGYRVFGTSRNPARAAPI---------------PGVELLELDVTDDASVQAAV---DEVIARAGRIDVL   77 (270)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChhhcccc---------------CCCeeEEeecCCHHHHHHHH---HHHHHhCCCCCEE
Confidence            58999999999999999999987654321               12233333444555555555   4444444444566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      +++.+.
T Consensus        78 i~~ag~   83 (270)
T PRK06179         78 VNNAGV   83 (270)
T ss_pred             EECCCC
Confidence            666554

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=92.26  E-value=0.49  Score=38.34  Aligned_cols=56  Identities=21%  Similarity=0.327  Sum_probs=44.2

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHH
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLD   62 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~   62 (183)
                      ..|+..|.+.|.+|.+||.--....   ..++...+++.+++++||+|++.+-+ +..+.
T Consensus       319 ~~i~~~L~~~G~~v~~~DP~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  374 (388)
T PRK15057        319 QGIMKRIKAKGVEVIIYEPVMKEDS---FFNSRLERDLATFKQQADVIISNRMA-EELKD  374 (388)
T ss_pred             HHHHHHHHhCCCEEEEECCCCCchh---hcCCeeeCCHHHHHHhCCEEEEcCCc-HHHHh
Confidence            4678899999999999997643322   33778889999999999999999977 44444

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=92.24  E-value=0.63  Score=34.33  Aligned_cols=29  Identities=34%  Similarity=0.694  Sum_probs=24.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|.+.+|++++.+..
T Consensus        17 iG~~l~~~l~~~g~~v~~~~r~~~~~~~~   45 (246)
T PRK05653         17 IGRAIALRLAADGAKVVIYDSNEEAAEAL   45 (246)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChhHHHHH
Confidence            48899999999999999999998776543

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=92.23  E-value=0.65  Score=38.13  Aligned_cols=81  Identities=20%  Similarity=0.139  Sum_probs=48.1

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEe
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVID   82 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid   82 (183)
                      ..|+..|.+.|.+|.+||..-...+.....+....+  ....+++|.|++.+..++ .+..=+  +.+...++...+|+|
T Consensus       337 ~~ii~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~--~~~~~~ad~vvi~t~h~~-f~~~~~--~~~~~~~~~~~~iiD  411 (425)
T PRK15182        337 IDVVKELGKYSCKVDIFDPWVDAEEVRREYGIIPVS--EVKSSHYDAIIVAVGHQQ-FKQMGS--EDIRGFGKDKHVLYD  411 (425)
T ss_pred             HHHHHHHHhCCCEEEEECCCCChhHHHHhcCcccch--hhhhcCCCEEEEccCCHH-hhcCCH--HHHHHhcCCCCEEEE
Confidence            468889999999999999752211111112321111  224678999999998754 333200  234443433458899


Q ss_pred             ccCCCc
Q psy755           83 SSTVDP   88 (183)
Q Consensus        83 ~s~~~~   88 (183)
                      +-+...
T Consensus       412 ~r~~~~  417 (425)
T PRK15182        412 LKYVLP  417 (425)
T ss_pred             CCCCCC
Confidence            887765

>PRK07062 short chain dehydrogenase; Provisional

Probab=92.23  E-value=0.51  Score=35.59  Aligned_cols=30  Identities=17%  Similarity=0.318  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+...
T Consensus        20 iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   49 (265)
T PRK07062         20 IGLATVELLLEAGASVAICGRDEERLASAE   49 (265)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.21  E-value=0.69  Score=35.31  Aligned_cols=25  Identities=12%  Similarity=0.200  Sum_probs=22.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA   25 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~   25 (183)
                      ||.++|+.|++.|++|++.+|+...
T Consensus        21 IG~aiA~~la~~Ga~V~~~~r~~~~   45 (271)
T PRK06505         21 IAWGIAKQLAAQGAELAFTYQGEAL   45 (271)
T ss_pred             HHHHHHHHHHhCCCEEEEecCchHH
Confidence            6899999999999999999887643

>PRK06057 short chain dehydrogenase; Provisional

Probab=92.20  E-value=0.89  Score=34.10  Aligned_cols=30  Identities=33%  Similarity=0.464  Sum_probs=25.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++.+.+...
T Consensus        19 IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~   48 (255)
T PRK06057         19 IGLATARRLAAEGATVVVGDIDPEAGKAAA   48 (255)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999987765543

>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function

Probab=92.10  E-value=0.14  Score=35.55  Aligned_cols=76  Identities=22%  Similarity=0.182  Sum_probs=45.0

Q ss_pred             HHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEec
Q psy755            4 HMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDS   83 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~   83 (183)
                      ++...|.+.+++++++|++++.....  .+.......++++.+||+|+++-..  -+...+   +.+.+..+++..++-.
T Consensus        22 P~~~~l~~~~~~v~v~d~~~~~~~~~--~~~~~~~~~~~~l~~aD~viiTGsT--lvN~Ti---~~iL~~~~~~~~vil~   94 (147)
T PF04016_consen   22 PLVEKLKERGAEVRVFDLNPDNIGEE--PGDVPDEDAEEILPWADVVIITGST--LVNGTI---DDILELARNAREVILY   94 (147)
T ss_dssp             CCHHHHCCCCSEEEEEESSGGG--SS--CT-EEGGGHHHHGGG-SEEEEECHH--CCTTTH---HHHHHHTTTSSEEEEE
T ss_pred             HHHHHHhcCCCCEEEEECCCCCCCCC--CCcCCHHHHHHHHccCCEEEEEeee--eecCCH---HHHHHhCccCCeEEEE
Confidence            45677887889999999999764321  1222444677889999999998521  112222   4444555555555544


Q ss_pred             cCC
Q psy755           84 STV   86 (183)
Q Consensus        84 s~~   86 (183)
                      +.+
T Consensus        95 GpS   97 (147)
T PF04016_consen   95 GPS   97 (147)
T ss_dssp             SCC
T ss_pred             ecC
Confidence            443

; PDB: 3L5O_B 3NPG_A.

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=92.10  E-value=0.83  Score=34.48  Aligned_cols=25  Identities=24%  Similarity=0.180  Sum_probs=22.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA   25 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~   25 (183)
                      ||.++|+.|++.|++|++.+|+++.
T Consensus        24 IG~a~a~~la~~G~~v~l~~r~~~~   48 (258)
T PRK07533         24 IAWGCARAFRALGAELAVTYLNDKA   48 (258)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCChhh
Confidence            6899999999999999999888653

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=92.10  E-value=0.58  Score=37.80  Aligned_cols=79  Identities=16%  Similarity=0.196  Sum_probs=52.1

Q ss_pred             HHHHHHHhCCCcEEEEcCCchhHH-HHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEe
Q psy755            4 HMARNLLKNGHDVIVYDKNTDASQ-TLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVID   82 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid   82 (183)
                      -+...|.+.|-+|.+||..-...+ +....+.. ....++.++++|+|++++-. .+.+.+     .....-+..++|+|
T Consensus       346 ~ii~~l~~~g~~v~~~DP~v~~~~~~~~~~~~~-~~~~e~al~~~D~vVi~tDH-~~fk~i-----d~~~i~~~~~vivD  418 (436)
T COG0677         346 DIIELLEEWGGEVLVYDPYVKELPTREDGEGVT-LAILEEALKDADAVVIATDH-SEFKEI-----DYEAIGKEAKVIVD  418 (436)
T ss_pred             HHHHHHHHhCCeEEEECCCCCcchhhhhccccc-hhhHHHHhccCCEEEEEecc-HHhhcC-----CHHHhccCCcEEEE
Confidence            366778888999999998877655 22222222 36788999999999999944 444332     11122233788999


Q ss_pred             ccCCCch
Q psy755           83 SSTVDPQ   89 (183)
Q Consensus        83 ~s~~~~~   89 (183)
                      +-+....
T Consensus       419 trnV~~~  425 (436)
T COG0677         419 TRNVWKR  425 (436)
T ss_pred             Cccccch
Confidence            8876543

>PRK07326 short chain dehydrogenase; Provisional

Probab=92.02  E-value=0.67  Score=34.18  Aligned_cols=30  Identities=23%  Similarity=0.374  Sum_probs=25.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        18 iG~~la~~l~~~g~~V~~~~r~~~~~~~~~   47 (237)
T PRK07326         18 IGFAIAEALLAEGYKVAITARDQKELEEAA   47 (237)
T ss_pred             HHHHHHHHHHHCCCEEEEeeCCHHHHHHHH
Confidence            488999999999999999999987765543

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=92.01  E-value=0.49  Score=36.00  Aligned_cols=30  Identities=27%  Similarity=0.615  Sum_probs=25.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|+++..+.+.
T Consensus        22 iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   51 (278)
T PRK08277         22 LGGAMAKELARAGAKVAILDRNQEKAEAVV   51 (278)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999987665543

>PRK06703 flavodoxin; Provisional

Probab=91.87  E-value=3  Score=28.75  Aligned_cols=88  Identities=13%  Similarity=0.037  Sum_probs=46.0

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCCh------HHHHHHhcCCccccccCCC
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPAS------QDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~------~~~~~v~~~~~~l~~~l~~   76 (183)
                      ..|+..|...|++|.+.+.+..              +. +.+.++|.|++++|.-      ..+...+   +.+.+.-.+
T Consensus        20 ~~ia~~l~~~g~~v~~~~~~~~--------------~~-~~l~~~d~viigspt~~~g~~p~~~~~f~---~~l~~~~l~   81 (151)
T PRK06703         20 DLIKVSLDAFDHEVVLQEMDGM--------------DA-EELLAYDGIILGSYTWGDGDLPYEAEDFH---EDLENIDLS   81 (151)
T ss_pred             HHHHHHHHhcCCceEEEehhhC--------------CH-HHHhcCCcEEEEECCCCCCcCcHHHHHHH---HHHhcCCCC
Confidence            4455555555666665543321              11 2356789999988742      2344443   334332224


Q ss_pred             CcEEEeccCCC---c---hhHHHHHHHHHhcCCcEEee
Q psy755           77 GVIVIDSSTVD---P---QVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        77 ~~iiid~s~~~---~---~~~~~~~~~~~~~g~~~~~~  108 (183)
                      ++.+.-.++..   +   .....+.+.+.+.|..++..
T Consensus        82 ~k~~~vfg~g~~~y~~~~~a~~~l~~~l~~~G~~~~~~  119 (151)
T PRK06703         82 GKKVAVFGSGDTAYPLFCEAVTIFEERLVERGAELVQE  119 (151)
T ss_pred             CCEEEEEccCCCChHHHHHHHHHHHHHHHHCCCEEccc
Confidence            54443333321   1   23344777788888877664

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=91.86  E-value=0.76  Score=34.32  Aligned_cols=30  Identities=27%  Similarity=0.558  Sum_probs=25.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|.+.|++|++.+|++++.+.+.
T Consensus        12 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~   41 (248)
T PRK10538         12 FGECITRRFIQQGHKVIATGRRQERLQELK   41 (248)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            478999999999999999999988766543

>PRK07074 short chain dehydrogenase; Provisional

Probab=91.85  E-value=0.96  Score=33.88  Aligned_cols=31  Identities=29%  Similarity=0.514  Sum_probs=26.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..++..|++.|++|++.+|++++.+.+.+
T Consensus        14 iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~   44 (257)
T PRK07074         14 IGQALARRFLAAGDRVLALDIDAAALAAFAD   44 (257)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5889999999999999999999887665543

>TIGR01087 murD UDP-N-acetylmuramoylalanine--D-glutamate ligase

Probab=91.84  E-value=2.2  Score=34.88  Aligned_cols=112  Identities=21%  Similarity=0.231  Sum_probs=62.9

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchh-HH---H-HH-HcCCcccC-CHHHHhccCCEEEEec--CChHH-HHHHh------c
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDA-SQ---T-LA-KEGANMAL-SLSTLASGAEFIISML--PASQD-VLDAY------D   65 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~-~~---~-~~-~~g~~~~~-~~~~~~~~adiVi~~v--p~~~~-~~~v~------~   65 (183)
                      |.++|+.|.+.|++|+++|..+.. .+   . +. ..|+.... ...+.+.++|+||..-  |...+ +....      .
T Consensus        11 G~a~a~~l~~~G~~V~~sD~~~~~~~~~~~~~~~~~~gi~~~~g~~~~~~~~~d~vv~sp~i~~~~p~~~~a~~~~i~i~   90 (433)
T TIGR01087        11 GRAVARFLHKKGAEVTVTDLKPNEELEPSMGQLRLNEGSVLHTGLHLEDLNNADLVVKSPGIPPDHPLVQAAAKRGIPVV   90 (433)
T ss_pred             HHHHHHHHHHCCCEEEEEeCCCCccchhHHHHHhhccCcEEEecCchHHhccCCEEEECCCCCCCCHHHHHHHHCCCcEE
Confidence            678999999999999999976542 22   1 22 23654321 2245567899888865  22221 22211      0


Q ss_pred             CCccc-cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCC
Q psy755           66 GSDGI-LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGG  113 (183)
Q Consensus        66 ~~~~l-~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  113 (183)
                      ...++ ...+....+-|-.|+++..+..-+...+...|..+.-+.-.+.
T Consensus        91 ~~~e~~~~~~~~~~I~VTGT~GKTTTt~li~~iL~~~g~~~~~~gnig~  139 (433)
T TIGR01087        91 GDIELFLRLVPLPVVAITGTNGKTTTTSLLYHLLKAAGLKAFLGGNIGT  139 (433)
T ss_pred             EHHHHHHhhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCCeEEECccCH
Confidence            00111 1222222344566677788888888888887765544333333

>PRK07035 short chain dehydrogenase; Provisional

Probab=91.83  E-value=0.71  Score=34.49  Aligned_cols=30  Identities=33%  Similarity=0.542  Sum_probs=25.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.
T Consensus        20 IG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~   49 (252)
T PRK07035         20 IGEAIAKLLAQQGAHVIVSSRKLDGCQAVA   49 (252)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999987766543

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=91.79  E-value=1.4  Score=33.63  Aligned_cols=77  Identities=18%  Similarity=0.195  Sum_probs=46.7

Q ss_pred             cHHHHHHHHhCCCc-EEEEcCCchhHHHHHHcCCcccC---CHHHHh------ccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            2 GSHMARNLLKNGHD-VIVYDKNTDASQTLAKEGANMAL---SLSTLA------SGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         2 G~~iA~~l~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~---~~~~~~------~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      |...++.+...|.+ |++.++++++.+.+.+.|....-   +..+.+      ...|+||-++..+..++..       .
T Consensus       133 G~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~-------~  205 (280)
T TIGR03366       133 GLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRAC-------L  205 (280)
T ss_pred             HHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHH-------H
Confidence            55666666677886 88889999988888777753221   111111      2478888888654444443       2


Q ss_pred             ccCCCCcEEEeccC
Q psy755           72 KHAKPGVIVIDSST   85 (183)
Q Consensus        72 ~~l~~~~iiid~s~   85 (183)
                      +.++++..++..+.
T Consensus       206 ~~l~~~G~iv~~G~  219 (280)
T TIGR03366       206 ESLDVGGTAVLAGS  219 (280)
T ss_pred             HHhcCCCEEEEecc
Confidence            44556555555543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK06194 hypothetical protein; Provisional

Probab=91.77  E-value=0.65  Score=35.46  Aligned_cols=30  Identities=23%  Similarity=0.233  Sum_probs=25.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|+++..++..
T Consensus        18 IG~~la~~l~~~G~~V~~~~r~~~~~~~~~   47 (287)
T PRK06194         18 FGLAFARIGAALGMKLVLADVQQDALDRAV   47 (287)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHHHHHHH
Confidence            589999999999999999999887665543

>KOG1370|consensus

Probab=91.76  E-value=1.1  Score=35.09  Aligned_cols=81  Identities=19%  Similarity=0.227  Sum_probs=59.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |..-|..|...|..|++...+|-.+-.+.=+|.+.. +++|+++..|+++.++....    ++.  .+-...++.+.||.
T Consensus       226 GKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~-tm~ea~~e~difVTtTGc~d----ii~--~~H~~~mk~d~IvC  298 (434)
T KOG1370|consen  226 GKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVT-TLEEAIREVDIFVTTTGCKD----IIT--GEHFDQMKNDAIVC  298 (434)
T ss_pred             chhHHHHHhhcCcEEEEeccCchHHHHHHhhccEee-eHHHhhhcCCEEEEccCCcc----hhh--HHHHHhCcCCcEEe
Confidence            677788999999999999999975444443465544 89999999999999986532    221  34456788899998


Q ss_pred             eccCCCch
Q psy755           82 DSSTVDPQ   89 (183)
Q Consensus        82 d~s~~~~~   89 (183)
                      +.+-....
T Consensus       299 N~Ghfd~E  306 (434)
T KOG1370|consen  299 NIGHFDTE  306 (434)
T ss_pred             ccccccce
Confidence            87765433

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=91.75  E-value=2.1  Score=31.77  Aligned_cols=98  Identities=14%  Similarity=0.147  Sum_probs=58.0

Q ss_pred             CcHHHHHHHHhCCCcE-EEEcCCc----------hhHHHHHHcC-CcccC-----CHHHH-hccCCEEEEecCChHHHHH
Q psy755            1 MGSHMARNLLKNGHDV-IVYDKNT----------DASQTLAKEG-ANMAL-----SLSTL-ASGAEFIISMLPASQDVLD   62 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V-~~~~~~~----------~~~~~~~~~g-~~~~~-----~~~~~-~~~adiVi~~vp~~~~~~~   62 (183)
                      .|+.+|+.|.+.|..| .+.|.+.          +.++...+.+ ....+     +..++ -.+||+++.|.+.+.-.. 
T Consensus        34 VG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~DVlipaA~~~~i~~-  112 (217)
T cd05211          34 VGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAILGLDVDIFAPCALGNVIDL-  112 (217)
T ss_pred             HHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCcccccCcccceeccccEEeeccccCccCh-
Confidence            3788999999998854 4568877          5555554442 11111     11222 237999999998753222 


Q ss_pred             HhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEee
Q psy755           63 AYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        63 v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                            +..+.+ +-++|+...+. |.+. ...+.+.++|+.+++.
T Consensus       113 ------~~a~~l-~a~~V~e~AN~-p~t~-~a~~~L~~~Gi~v~Pd  149 (217)
T cd05211         113 ------ENAKKL-KAKVVAEGANN-PTTD-EALRILHERGIVVAPD  149 (217)
T ss_pred             ------hhHhhc-CccEEEeCCCC-CCCH-HHHHHHHHCCcEEECh
Confidence                  222333 24455555443 3333 5677888899887763

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK06172 short chain dehydrogenase; Provisional

Probab=91.67  E-value=0.78  Score=34.27  Aligned_cols=30  Identities=20%  Similarity=0.412  Sum_probs=25.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|+++..+++.
T Consensus        19 iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~   48 (253)
T PRK06172         19 IGRATALAFAREGAKVVVADRDAAGGEETV   48 (253)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            588999999999999999999988765543

>PRK07677 short chain dehydrogenase; Provisional

Probab=91.64  E-value=0.86  Score=34.09  Aligned_cols=30  Identities=20%  Similarity=0.469  Sum_probs=25.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        13 iG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~   42 (252)
T PRK07677         13 MGKAMAKRFAEEGANVVITGRTKEKLEEAK   42 (252)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999987665543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=91.63  E-value=0.79  Score=34.06  Aligned_cols=30  Identities=30%  Similarity=0.582  Sum_probs=25.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        15 iG~~la~~l~~~g~~v~~~~r~~~~~~~~~   44 (250)
T TIGR03206        15 IGGATCRRFAEEGAKVAVFDLNREAAEKVA   44 (250)
T ss_pred             HHHHHHHHHHHCCCEEEEecCCHHHHHHHH
Confidence            488999999999999999999987765543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK00676 hemA glutamyl-tRNA reductase; Validated

Probab=91.60  E-value=0.3  Score=38.73  Aligned_cols=48  Identities=8%  Similarity=0.070  Sum_probs=32.1

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM   53 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~   53 (183)
                      ||...+++|.++|. +|++.+|+....+ +...   .. ...+....+|+||.|
T Consensus       185 m~~l~a~~L~~~g~~~i~v~nRt~~~~~-~~~~---~~-~~~~~~~~~DvVIs~  233 (338)
T PRK00676        185 INRKVAYYLQRQGYSRITFCSRQQLTLP-YRTV---VR-EELSFQDPYDVIFFG  233 (338)
T ss_pred             HHHHHHHHHHHcCCCEEEEEcCCccccc-hhhh---hh-hhhhcccCCCEEEEc
Confidence            78899999999996 6999999985311 1100   00 111334689999986

>PRK05993 short chain dehydrogenase; Provisional

Probab=91.55  E-value=0.91  Score=34.61  Aligned_cols=31  Identities=23%  Similarity=0.349  Sum_probs=26.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..+++.|++.|++|++.+|+++..+.+..
T Consensus        16 iG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~   46 (277)
T PRK05993         16 IGAYCARALQSDGWRVFATCRKEEDVAALEA   46 (277)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            5889999999999999999999988776654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=91.51  E-value=0.43  Score=35.18  Aligned_cols=32  Identities=25%  Similarity=0.461  Sum_probs=29.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE   32 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~   32 (183)
                      +|.++|++|.+.|.+|.+..|++++++.+.+.
T Consensus        17 IGl~lak~f~elgN~VIi~gR~e~~L~e~~~~   48 (245)
T COG3967          17 IGLALAKRFLELGNTVIICGRNEERLAEAKAE   48 (245)
T ss_pred             hhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc
Confidence            68999999999999999999999999887765

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=91.49  E-value=0.9  Score=34.51  Aligned_cols=23  Identities=13%  Similarity=0.299  Sum_probs=20.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      ||.++|+.|++.|++|++.+|+.
T Consensus        20 IG~aia~~la~~G~~vil~~r~~   42 (262)
T PRK07984         20 IAYGIAQAMHREGAELAFTYQND   42 (262)
T ss_pred             HHHHHHHHHHHCCCEEEEEecch
Confidence            58899999999999999888873

>KOG1201|consensus

Probab=91.47  E-value=0.87  Score=35.33  Aligned_cols=75  Identities=15%  Similarity=0.305  Sum_probs=50.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.||..+++.|..+++||.+.+..+.-.+.       ..+. ..+..-.+=+.+..++....   +++.+...+=.++
T Consensus        50 lGr~ialefa~rg~~~vl~Din~~~~~etv~~-------~~~~-g~~~~y~cdis~~eei~~~a---~~Vk~e~G~V~IL  118 (300)
T KOG1201|consen   50 LGRLIALEFAKRGAKLVLWDINKQGNEETVKE-------IRKI-GEAKAYTCDISDREEIYRLA---KKVKKEVGDVDIL  118 (300)
T ss_pred             HHHHHHHHHHHhCCeEEEEeccccchHHHHHH-------HHhc-CceeEEEecCCCHHHHHHHH---HHHHHhcCCceEE
Confidence            58999999999999999999999865543322       0000 13445555566667777765   6666666666677


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |+..+.
T Consensus       119 VNNAGI  124 (300)
T KOG1201|consen  119 VNNAGI  124 (300)
T ss_pred             Eecccc
Confidence            766554

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=91.43  E-value=0.25  Score=39.21  Aligned_cols=78  Identities=14%  Similarity=0.087  Sum_probs=42.8

Q ss_pred             cHHHHHHHHhCCCcEEE--EcCCchhHH-HHHHcC--Cccc-CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            2 GSHMARNLLKNGHDVIV--YDKNTDASQ-TLAKEG--ANMA-LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~--~~~~~~~~~-~~~~~g--~~~~-~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      |..+.+.|.+.+|++.-  +-.+.++.. .+...+  .... .+..+ ++++|+||+++|.... ....   +.   ...
T Consensus        17 G~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~~~l~~~~~~~~~-~~~vD~vFla~p~~~s-~~~v---~~---~~~   88 (336)
T PRK05671         17 GEALVQILEERDFPVGTLHLLASSESAGHSVPFAGKNLRVREVDSFD-FSQVQLAFFAAGAAVS-RSFA---EK---ARA   88 (336)
T ss_pred             HHHHHHHHhhCCCCceEEEEEECcccCCCeeccCCcceEEeeCChHH-hcCCCEEEEcCCHHHH-HHHH---HH---HHH
Confidence            67788888877774332  223332221 111111  1111 12233 4789999999996543 2332   22   235


Q ss_pred             CCcEEEeccCCC
Q psy755           76 PGVIVIDSSTVD   87 (183)
Q Consensus        76 ~~~iiid~s~~~   87 (183)
                      .|..+||.|+..
T Consensus        89 ~G~~VIDlS~~f  100 (336)
T PRK05671         89 AGCSVIDLSGAL  100 (336)
T ss_pred             CCCeEEECchhh
Confidence            688999999764

>PRK08267 short chain dehydrogenase; Provisional

Probab=91.42  E-value=1  Score=33.79  Aligned_cols=31  Identities=29%  Similarity=0.314  Sum_probs=26.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..+++.|++.|++|++.+|+++..+.+..
T Consensus        13 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~   43 (260)
T PRK08267         13 IGRATALLFAAEGWRVGAYDINEAGLAALAA   43 (260)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            5899999999999999999999987776644

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=91.39  E-value=0.7  Score=34.33  Aligned_cols=30  Identities=33%  Similarity=0.618  Sum_probs=25.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        17 iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~   46 (251)
T PRK07231         17 IGEGIARRFAAEGARVVVTDRNEEAAERVA   46 (251)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            588999999999999999999998765543

>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB

Probab=91.38  E-value=0.18  Score=36.74  Aligned_cols=72  Identities=24%  Similarity=0.310  Sum_probs=41.8

Q ss_pred             HHHHHhCCCcEEEEcCCchhHHHHHH----cCCcc---cCCHHH--HhccCCEEEEec----CChHHHHHHhcCCccccc
Q psy755            6 ARNLLKNGHDVIVYDKNTDASQTLAK----EGANM---ALSLST--LASGAEFIISML----PASQDVLDAYDGSDGILK   72 (183)
Q Consensus         6 A~~l~~~g~~V~~~~~~~~~~~~~~~----~g~~~---~~~~~~--~~~~adiVi~~v----p~~~~~~~v~~~~~~l~~   72 (183)
                      +.-|++.|++|..+|.|+..++.+.+    .++..   ..++.+  .-..-|+|+.++    -.+...+.++   +.+..
T Consensus        45 alyLA~~G~~VtAvD~s~~al~~l~~~a~~~~l~i~~~~~Dl~~~~~~~~yD~I~st~v~~fL~~~~~~~i~---~~m~~  121 (192)
T PF03848_consen   45 ALYLASQGFDVTAVDISPVALEKLQRLAEEEGLDIRTRVADLNDFDFPEEYDFIVSTVVFMFLQRELRPQII---ENMKA  121 (192)
T ss_dssp             HHHHHHTT-EEEEEESSHHHHHHHHHHHHHTT-TEEEEE-BGCCBS-TTTEEEEEEESSGGGS-GGGHHHHH---HHHHH
T ss_pred             HHHHHHCCCeEEEEECCHHHHHHHHHHHhhcCceeEEEEecchhccccCCcCEEEEEEEeccCCHHHHHHHH---HHHHh
Confidence            45689999999999999988766543    23321   112211  113467777543    2234455666   67777


Q ss_pred             cCCCCcEE
Q psy755           73 HAKPGVIV   80 (183)
Q Consensus        73 ~l~~~~ii   80 (183)
                      .+++|...
T Consensus       122 ~~~pGG~~  129 (192)
T PF03848_consen  122 ATKPGGYN  129 (192)
T ss_dssp             TEEEEEEE
T ss_pred             hcCCcEEE
Confidence            77777653

When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=91.29  E-value=1  Score=34.00  Aligned_cols=30  Identities=20%  Similarity=0.307  Sum_probs=25.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+...
T Consensus        22 iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~   51 (265)
T PRK07097         22 IGFAIAKAYAKAGATIVFNDINQELVDKGL   51 (265)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            588999999999999999999988766543

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=91.29  E-value=3.2  Score=34.51  Aligned_cols=53  Identities=28%  Similarity=0.372  Sum_probs=31.7

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch-h----HHHHHHcCCcccC-CHHHHhccCCEEEEec
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD-A----SQTLAKEGANMAL-SLSTLASGAEFIISML   54 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~-~----~~~~~~~g~~~~~-~~~~~~~~adiVi~~v   54 (183)
                      |.++|..|.+.|++|+++|+++. .    .+.+.+.|+.... ...+....+|+||++.
T Consensus        28 G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~D~Vv~s~   86 (480)
T PRK01438         28 GFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPTLPEDTDLVVTSP   86 (480)
T ss_pred             HHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCccccCCCCEEEECC
Confidence            67789999999999999996653 1    2334444554321 1111233466666655

>PRK09186 flagellin modification protein A; Provisional

Probab=91.28  E-value=0.91  Score=33.91  Aligned_cols=30  Identities=30%  Similarity=0.462  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+|+.|++.|++|++.+|++++.+.+.
T Consensus        16 iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   45 (256)
T PRK09186         16 IGSALVKAILEAGGIVIAADIDKEALNELL   45 (256)
T ss_pred             HHHHHHHHHHHCCCEEEEEecChHHHHHHH
Confidence            589999999999999999999988766543

>PRK12829 short chain dehydrogenase; Provisional

Probab=91.26  E-value=0.94  Score=33.96  Aligned_cols=30  Identities=27%  Similarity=0.331  Sum_probs=25.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|+++|++|++.+|+++..+.+.
T Consensus        23 iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~   52 (264)
T PRK12829         23 IGRAIAEAFAEAGARVHVCDVSEAALAATA   52 (264)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            588999999999999999999987665544

>PRK10537 voltage-gated potassium channel; Provisional

Probab=91.21  E-value=1.8  Score=35.18  Aligned_cols=97  Identities=13%  Similarity=0.004  Sum_probs=54.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCC--cccC-CHHHH-----hccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA--NMAL-SLSTL-----ASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~--~~~~-~~~~~-----~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      +|..+++.|.+.|+++++.+.+.  .+...+.+.  ...+ +.++.     +++|+.|+++++++..--.+.   .... 
T Consensus       251 lg~~v~~~L~~~g~~vvVId~d~--~~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t~dD~~Nl~iv---L~ar-  324 (393)
T PRK10537        251 LAINTYLGLRQRGQAVTVIVPLG--LEHRLPDDADLIPGDSSDSAVLKKAGAARARAILALRDNDADNAFVV---LAAK-  324 (393)
T ss_pred             HHHHHHHHHHHCCCCEEEEECch--hhhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEcCCChHHHHHHH---HHHH-
Confidence            36788999999999999888653  333333332  1111 22222     468999999998765443333   2222 


Q ss_pred             cCCC-CcEEEeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           73 HAKP-GVIVIDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        73 ~l~~-~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      .+.+ .++++-..+      ....+.+++.|...+=.|
T Consensus       325 ~l~p~~kIIa~v~~------~~~~~~L~~~GaD~VIsp  356 (393)
T PRK10537        325 EMSSDVKTVAAVND------SKNLEKIKRVHPDMIFSP  356 (393)
T ss_pred             HhCCCCcEEEEECC------HHHHHHHHhcCCCEEECH
Confidence            3334 456554443      233455566676655433

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=91.19  E-value=2  Score=32.49  Aligned_cols=98  Identities=19%  Similarity=0.228  Sum_probs=58.0

Q ss_pred             HHHHHHhCCCc-EEEEcCCchhHHHHHHc----CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            5 MARNLLKNGHD-VIVYDKNTDASQTLAKE----GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         5 iA~~l~~~g~~-V~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ++..+++.|.. |++.|.|+..++.+.+.    ++...-...+.-...|+|+..... ..+..++   +.+...+++|..
T Consensus       133 l~i~~~~~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~~~~fD~Vvani~~-~~~~~l~---~~~~~~LkpgG~  208 (250)
T PRK00517        133 LAIAAAKLGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQGDLKADVIVANILA-NPLLELA---PDLARLLKPGGR  208 (250)
T ss_pred             HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccCCCCcCEEEEcCcH-HHHHHHH---HHHHHhcCCCcE
Confidence            34445666764 99999999987766543    321000000000047998876643 4455555   777888988877


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++-. .........+.+.+.+.|+..+.
T Consensus       209 lils-gi~~~~~~~v~~~l~~~Gf~~~~  235 (250)
T PRK00517        209 LILS-GILEEQADEVLEAYEEAGFTLDE  235 (250)
T ss_pred             EEEE-ECcHhhHHHHHHHHHHCCCEEEE
Confidence            6643 33334455667777777776655

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=91.18  E-value=0.49  Score=37.17  Aligned_cols=54  Identities=17%  Similarity=0.225  Sum_probs=37.1

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc--------C---CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE--------G---ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~--------g---~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|.++|..|+..|.  +++++|+++++++.....        +   +....+.++ +++||+||++.-
T Consensus        14 VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~-~~~adivvitaG   80 (312)
T cd05293          14 VGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSV-TANSKVVIVTAG   80 (312)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHH-hCCCCEEEECCC
Confidence            47888998888876  799999988765432211        1   122345554 899999999763

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05872 short chain dehydrogenase; Provisional

Probab=91.14  E-value=1  Score=34.74  Aligned_cols=73  Identities=15%  Similarity=0.200  Sum_probs=44.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEE--EecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFII--SMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi--~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+.-       .   ...++..  .-+.+..+++.++   +++...+.+=+
T Consensus        21 IG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l-------~---~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~id   87 (296)
T PRK05872         21 IGAELARRLHARGAKLALVDLEEAELAALAAEL-------G---GDDRVLTVVADVTDLAAMQAAA---EEAVERFGGID   87 (296)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------c---CCCcEEEEEecCCCHHHHHHHH---HHHHHHcCCCC
Confidence            589999999999999999999998776654321       0   0123332  3334445555554   44444333335


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            56665543

>PRK05086 malate dehydrogenase; Provisional

Probab=90.92  E-value=1.1  Score=35.31  Aligned_cols=56  Identities=16%  Similarity=0.239  Sum_probs=35.0

Q ss_pred             CcHHHHHHHHh---CCCcEEEEcCCchhH---HHHHHcC--Ccc----cCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLK---NGHDVIVYDKNTDAS---QTLAKEG--ANM----ALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~---~g~~V~~~~~~~~~~---~~~~~~g--~~~----~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|.+++..|..   .+++++++|+++..-   -.+...+  ...    .+++.+.++++|+||+|.-.
T Consensus        12 VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~   79 (312)
T PRK05086         12 IGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGV   79 (312)
T ss_pred             HHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCC
Confidence            47788877744   245899999886531   1222211  111    34556778999999999854

>PLN02253 xanthoxin dehydrogenase

Probab=90.91  E-value=0.92  Score=34.52  Aligned_cols=74  Identities=19%  Similarity=0.230  Sum_probs=42.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|+++..+...+.-       .. -.+...+-.=+.+...++..+   +.+...+.+=.++
T Consensus        30 IG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~Dl~d~~~~~~~~---~~~~~~~g~id~l   98 (280)
T PLN02253         30 IGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL-------GG-EPNVCFFHCDVTVEDDVSRAV---DFTVDKFGTLDIM   98 (280)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-------cC-CCceEEEEeecCCHHHHHHHH---HHHHHHhCCCCEE
Confidence            589999999999999999999877655443210       00 011223333344555555554   4444433333556


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |++..
T Consensus        99 i~~Ag  103 (280)
T PLN02253         99 VNNAG  103 (280)
T ss_pred             EECCC
Confidence            66554

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=90.84  E-value=0.51  Score=37.22  Aligned_cols=102  Identities=14%  Similarity=0.177  Sum_probs=68.9

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CC-------cccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GA-------NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~-------~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      |.-+|..|++.|.+-.+-.||+.++.++... |-       -.-...++.+...++|+-|+-+-.     ..+..-+...
T Consensus        19 G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt-----~~g~plv~aC   93 (382)
T COG3268          19 GGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYT-----RYGEPLVAAC   93 (382)
T ss_pred             hHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccc-----ccccHHHHHH
Confidence            6678999999999888889999999988765 21       111245677889999999995532     1222334567


Q ss_pred             CCCCcEEEeccCCCchhHHHH---HHHHHhcCCcEEee
Q psy755           74 AKPGVIVIDSSTVDPQVPQTL---SNLAREKQITFLDA  108 (183)
Q Consensus        74 l~~~~iiid~s~~~~~~~~~~---~~~~~~~g~~~~~~  108 (183)
                      +..|+...|.|.-..---+.+   +....+.|+..+.+
T Consensus        94 ~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~  131 (382)
T COG3268          94 AAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPG  131 (382)
T ss_pred             HHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEecc
Confidence            778888889887654432222   33444557766663

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.79  E-value=1.5  Score=33.59  Aligned_cols=23  Identities=13%  Similarity=0.232  Sum_probs=21.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      ||.++|+.|++.|++|++.+|+.
T Consensus        19 IG~aiA~~la~~G~~Vil~~r~~   41 (274)
T PRK08415         19 IAYGIAKACFEQGAELAFTYLNE   41 (274)
T ss_pred             HHHHHHHHHHHCCCEEEEEecCH
Confidence            68999999999999999999885

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=90.76  E-value=1.3  Score=33.32  Aligned_cols=23  Identities=22%  Similarity=0.228  Sum_probs=21.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      ||.++|+.|++.|++|++.+|+.
T Consensus        21 IG~a~a~~la~~G~~Vi~~~r~~   43 (252)
T PRK06079         21 IAWGCAQAIKDQGATVIYTYQND   43 (252)
T ss_pred             hHHHHHHHHHHCCCEEEEecCch
Confidence            68999999999999999998884

>PRK06482 short chain dehydrogenase; Provisional

Probab=90.74  E-value=1.2  Score=33.89  Aligned_cols=31  Identities=29%  Similarity=0.398  Sum_probs=26.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|+.+++.|++.|++|++.+|+++..+.+.+
T Consensus        14 IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~   44 (276)
T PRK06482         14 FGRGMTERLLARGDRVAATVRRPDALDDLKA   44 (276)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5889999999999999999999887666543

>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional

Probab=90.74  E-value=7.2  Score=31.67  Aligned_cols=86  Identities=5%  Similarity=0.027  Sum_probs=49.0

Q ss_pred             hccCCEEEEecCCh--H---HHHHHhcCCccccccCCCCcEEEeccCC--CchhHHHHHHHHHhcCCcEEeecccCCHHH
Q psy755           44 ASGAEFIISMLPAS--Q---DVLDAYDGSDGILKHAKPGVIVIDSSTV--DPQVPQTLSNLAREKQITFLDAPVSGGTKA  116 (183)
Q Consensus        44 ~~~adiVi~~vp~~--~---~~~~v~~~~~~l~~~l~~~~iiid~s~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  116 (183)
                      +.++|.|++..|.-  .   .+..++   +.+...-.+|+.+.-.++.  .......+.+.+...|+..+..|+.     
T Consensus       298 ~~~~d~ii~GspT~~~~~~~~~~~~l---~~l~~~~~~~K~~a~FGsygw~g~a~~~~~~~l~~~g~~~v~~~~~-----  369 (394)
T PRK11921        298 VFKSKAILVGSSTINRGILSSTAAIL---EEIKGLGFKNKKAAAFGSYGWSGESVKIITERLKKAGFEIVNDGIR-----  369 (394)
T ss_pred             HHhCCEEEEECCCcCccccHHHHHHH---HHhhccCcCCCEEEEEecCCCccHHHHHHHHHHHHCCCEEccCcEE-----
Confidence            34799999999872  1   133343   3444433467776544443  2445566777777778877763321     


Q ss_pred             HhcCceEEEecCCHHHHHHHHHHHHHhc
Q psy755          117 AQEATLTFMVGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus       117 ~~~~~~~~~~~g~~~~~~~~~~l~~~~g  144 (183)
                             +-...+++..++++++-+.++
T Consensus       370 -------~~~~p~~~~~~~~~~~g~~la  390 (394)
T PRK11921        370 -------ELWNPDDEALDRCRSFGENFA  390 (394)
T ss_pred             -------EEeCCCHHHHHHHHHHHHHHH
Confidence                   222235566667777666654

>PRK08339 short chain dehydrogenase; Provisional

Probab=90.67  E-value=0.32  Score=36.85  Aligned_cols=30  Identities=30%  Similarity=0.482  Sum_probs=26.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.
T Consensus        20 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~   49 (263)
T PRK08339         20 IGFGVARVLARAGADVILLSRNEENLKKAR   49 (263)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            689999999999999999999988766544

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=90.67  E-value=0.29  Score=37.97  Aligned_cols=55  Identities=24%  Similarity=0.324  Sum_probs=38.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-------ccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-------MALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-------~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.++..|.+.|++|++.+|+++........++.       ..+++.+.++.+|+||-+..
T Consensus        12 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~   73 (328)
T TIGR03466        12 VGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAA   73 (328)
T ss_pred             hhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEece
Confidence            58899999999999999999987764433222221       11234556778999988763

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK09242 tropinone reductase; Provisional

Probab=90.67  E-value=1.6  Score=32.75  Aligned_cols=30  Identities=30%  Similarity=0.506  Sum_probs=25.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|+++..+...
T Consensus        21 IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~   50 (257)
T PRK09242         21 IGLAIAREFLGLGADVLIVARDADALAQAR   50 (257)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999987766543

>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3

Probab=90.59  E-value=0.28  Score=35.43  Aligned_cols=44  Identities=14%  Similarity=0.379  Sum_probs=30.9

Q ss_pred             cEEEEcCCchhHHHHHH--------cC----CcccCCHHHHhccCCEEEEecCChH
Q psy755           15 DVIVYDKNTDASQTLAK--------EG----ANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~--------~g----~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      +++++|+++++++...+        .+    +..+++.+++++++|.||.++-.+-
T Consensus        30 ei~L~Did~~RL~~~~~~~~~~~~~~~~~~~v~~ttd~~eAl~gADfVi~~irvGg   85 (183)
T PF02056_consen   30 EIVLMDIDEERLEIVERLARRMVEEAGADLKVEATTDRREALEGADFVINQIRVGG   85 (183)
T ss_dssp             EEEEE-SCHHHHHHHHHHHHHHHHHCTTSSEEEEESSHHHHHTTESEEEE---TTH
T ss_pred             EEEEEcCCHHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHHhCCCCEEEEEeeecc
Confidence            79999999998764332        12    3557899999999999999996653

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.

>PRK06270 homoserine dehydrogenase; Provisional

Probab=90.57  E-value=1.5  Score=34.94  Aligned_cols=72  Identities=21%  Similarity=0.241  Sum_probs=41.3

Q ss_pred             CCHHHHhc--cCCEEEEecCChHHH-HHHhcCCccccccCCCCcEEEeccC-CCchhHHHHHHHHHhcCCcEEe-ecccC
Q psy755           38 LSLSTLAS--GAEFIISMLPASQDV-LDAYDGSDGILKHAKPGVIVIDSST-VDPQVPQTLSNLAREKQITFLD-APVSG  112 (183)
Q Consensus        38 ~~~~~~~~--~adiVi~~vp~~~~~-~~v~~~~~~l~~~l~~~~iiid~s~-~~~~~~~~~~~~~~~~g~~~~~-~~~~~  112 (183)
                      .+..+++.  +.|+|+.++|...+. ....   +-+...+..|+.|+-.+. ........+.+..++.|..|.- +.+.+
T Consensus        79 ~d~~ell~~~~~DvVvd~T~s~~~~~~~a~---~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~~g~~~~~ea~v~~  155 (341)
T PRK06270         79 ISGLEVIRSVDADVVVEATPTNIETGEPAL---SHCRKALERGKHVVTSNKGPLALAYKELKELAKKNGVRFRYEATVGG  155 (341)
T ss_pred             CCHHHHhhccCCCEEEECCcCcccccchHH---HHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHHcCCEEEEeeeeee
Confidence            36777763  689999999864321 1111   222456778888874432 1122345666777777776653 44443

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=90.57  E-value=1.6  Score=30.58  Aligned_cols=60  Identities=13%  Similarity=0.060  Sum_probs=36.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC-Ccc-cCCH-HHHhccCCEEEEecCChHHHHHHh
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEG-ANM-ALSL-STLASGAEFIISMLPASQDVLDAY   64 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g-~~~-~~~~-~~~~~~adiVi~~vp~~~~~~~v~   64 (183)
                      |...++.|.+.|++|++++  ++..+.+.+.+ +.. ...+ ++.++++|+||.++.+++ +...+
T Consensus        25 a~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT~d~e-~N~~i   87 (157)
T PRK06719         25 AYRKASGLKDTGAFVTVVS--PEICKEMKELPYITWKQKTFSNDDIKDAHLIYAATNQHA-VNMMV   87 (157)
T ss_pred             HHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcEEEecccChhcCCCceEEEECCCCHH-HHHHH
Confidence            4456777889999999995  44344444432 111 1112 234678999999997644 44433

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=90.56  E-value=4  Score=29.99  Aligned_cols=56  Identities=23%  Similarity=0.253  Sum_probs=36.9

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch-hHHHHHHcC-Ccc--cCCHHHHhccCCEEEEecCCh
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD-ASQTLAKEG-ANM--ALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g-~~~--~~~~~~~~~~adiVi~~vp~~   57 (183)
                      |..-++.|.+.|.+|++++.+.. .++.+.+.+ +..  .+-..+.+.++++||.++.++
T Consensus        21 a~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~lVi~at~d~   80 (205)
T TIGR01470        21 ALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDADILEGAFLVIAATDDE   80 (205)
T ss_pred             HHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCHHHhCCcEEEEECCCCH
Confidence            34456778899999999987654 345555543 221  111134578999999998775

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=90.56  E-value=3.9  Score=33.88  Aligned_cols=111  Identities=22%  Similarity=0.240  Sum_probs=64.0

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchh----HHHHHHcCCcccC--CHHHHhccCCEEEEec--CChHH-HHHHh-cCC----
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDA----SQTLAKEGANMAL--SLSTLASGAEFIISML--PASQD-VLDAY-DGS----   67 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~----~~~~~~~g~~~~~--~~~~~~~~adiVi~~v--p~~~~-~~~v~-~~~----   67 (183)
                      |.+.++.|.+.|++|+++|.++..    ...+...++....  ...+...++|+|+..=  |.... ++... +|.    
T Consensus        19 G~a~a~~L~~~G~~v~v~D~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~~~~d~vV~SPGi~~~~p~v~~A~~~gi~i~~   98 (448)
T COG0771          19 GLAAARFLLKLGAEVTVSDDRPAPEGLAAQPLLLEGIEVELGSHDDEDLAEFDLVVKSPGIPPTHPLVEAAKAAGIEIIG   98 (448)
T ss_pred             cHHHHHHHHHCCCeEEEEcCCCCccchhhhhhhccCceeecCccchhccccCCEEEECCCCCCCCHHHHHHHHcCCcEEe
Confidence            789999999999999999976665    1222234543321  1225677899999863  33222 22211 000    


Q ss_pred             -ccccccCC-CCcE-EEeccCCCchhHHHHHHHHHhcCCcEEeecccC
Q psy755           68 -DGILKHAK-PGVI-VIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG  112 (183)
Q Consensus        68 -~~l~~~l~-~~~i-iid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~  112 (183)
                       -++..... +..+ -|-.|+++..+..-+...+.+.|....-+.-.|
T Consensus        99 dieL~~r~~~~~p~vaITGTNGKTTTTsli~~~l~~~G~~~~lgGNIG  146 (448)
T COG0771          99 DIELFYRLSGEAPIVAITGTNGKTTTTSLIAHLLKAAGLDALLGGNIG  146 (448)
T ss_pred             HHHHHHHhcCCCCEEEEECCCchHHHHHHHHHHHHhcCCCceeccccC
Confidence             01122221 2333 466667788888888888888877544444333

>PRK06138 short chain dehydrogenase; Provisional

Probab=90.55  E-value=1.1  Score=33.30  Aligned_cols=75  Identities=16%  Similarity=0.168  Sum_probs=43.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|..+++.|++.|++|++.+|+.+..+...+.- . .      -....++..-+.++..++..+   +.+.+.+.+=..|
T Consensus        17 iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-~-~------~~~~~~~~~D~~~~~~~~~~~---~~i~~~~~~id~v   85 (252)
T PRK06138         17 IGRATAKLFAREGARVVVADRDAEAAERVAAAI-A-A------GGRAFARQGDVGSAEAVEALV---DFVAARWGRLDVL   85 (252)
T ss_pred             HHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHH-h-c------CCeEEEEEcCCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            588999999999999999999987655443221 0 0      001122223334445555554   4444444444566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      +++...
T Consensus        86 i~~ag~   91 (252)
T PRK06138         86 VNNAGF   91 (252)
T ss_pred             EECCCC
Confidence            666653

>PRK06949 short chain dehydrogenase; Provisional

Probab=90.48  E-value=1.3  Score=33.12  Aligned_cols=30  Identities=20%  Similarity=0.436  Sum_probs=25.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        21 IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~   50 (258)
T PRK06949         21 LGARFAQVLAQAGAKVVLASRRVERLKELR   50 (258)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            588999999999999999999988766554

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=90.48  E-value=1.1  Score=33.51  Aligned_cols=29  Identities=24%  Similarity=0.471  Sum_probs=24.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|.++++.|++.|++|++.+|++.+.+..
T Consensus        14 IG~~la~~l~~~g~~vi~~~r~~~~~~~~   42 (259)
T PRK12384         14 LGAFLCHGLAEEGYRVAVADINSEKAANV   42 (259)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            58899999999999999999998765544

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=90.48  E-value=0.4  Score=34.67  Aligned_cols=56  Identities=25%  Similarity=0.310  Sum_probs=40.5

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----cCCcccCCHHHHhccCCEEEEecCCh
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAK-----EGANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      |.-|+.-..+.||+|+..-||+.+......     ..+--.+++.+.+.+-|+||.+....
T Consensus        13 Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~   73 (211)
T COG2910          13 GSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAG   73 (211)
T ss_pred             HHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence            677888888999999999999998755311     11222234456788999999998543

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=90.44  E-value=0.71  Score=37.75  Aligned_cols=55  Identities=16%  Similarity=0.192  Sum_probs=39.0

Q ss_pred             HHHHHHHHhCC-CcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChH
Q psy755            3 SHMARNLLKNG-HDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         3 ~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      ..+++.|.+.| .+|.+||.--...+.... +.....++.++++++|.|++.++.++
T Consensus       343 ~~l~~~L~~~gg~~v~~~DP~~~~~~~~~~-~~~~~~~~~~~~~~ad~vvi~t~~~~  398 (415)
T PRK11064        343 MEIAELIAQWHSGETLVVEPNIHQLPKKLD-GLVTLVSLDEALATADVLVMLVDHSQ  398 (415)
T ss_pred             HHHHHHHHhcCCcEEEEECCCCCchhhhcc-CceeeCCHHHHHhCCCEEEECCCCHH
Confidence            45788999996 999999976433222111 12234688889999999999998854

>PRK05855 short chain dehydrogenase; Validated

Probab=90.42  E-value=0.77  Score=38.66  Aligned_cols=30  Identities=23%  Similarity=0.409  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|+.++.+.+.
T Consensus       327 iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~  356 (582)
T PRK05855        327 IGRETALAFAREGAEVVASDIDEAAAERTA  356 (582)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999987766543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=90.36  E-value=1.6  Score=34.52  Aligned_cols=76  Identities=22%  Similarity=0.240  Sum_probs=46.1

Q ss_pred             cHHHHHHHHhCCCcEEEEcC---CchhHHHHHHcCCcccCC----HHH--HhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLKNGHDVIVYDK---NTDASQTLAKEGANMALS----LST--LASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~---~~~~~~~~~~~g~~~~~~----~~~--~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |...++.+...|.+|++.++   ++++.+.+.+.|......    ..+  .....|+||-++..+..+...       ..
T Consensus       185 G~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~-------~~  257 (355)
T cd08230         185 GLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEA-------LP  257 (355)
T ss_pred             HHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCHHHHHHH-------HH
Confidence            55555666677889999988   577777777777543211    111  123579999999764433333       34


Q ss_pred             cCCCCcEEEecc
Q psy755           73 HAKPGVIVIDSS   84 (183)
Q Consensus        73 ~l~~~~iiid~s   84 (183)
                      .++++..++..+
T Consensus       258 ~l~~~G~~v~~G  269 (355)
T cd08230         258 ALAPNGVVILFG  269 (355)
T ss_pred             HccCCcEEEEEe
Confidence            556655555444

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=90.25  E-value=2.1  Score=33.79  Aligned_cols=77  Identities=9%  Similarity=0.129  Sum_probs=47.9

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCccc-----CCHHHHhc---cCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMA-----LSLSTLAS---GAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~---~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |....+.+...|. +|++.++++++.+.+.+.|....     ++..+..+   ..|+||-++..+..+...       ..
T Consensus       182 G~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~-------~~  254 (343)
T PRK09880        182 GCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTC-------LE  254 (343)
T ss_pred             HHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHH-------HH
Confidence            4455555556687 58889999999998888875321     12233222   278999998764444333       34


Q ss_pred             cCCCCcEEEeccC
Q psy755           73 HAKPGVIVIDSST   85 (183)
Q Consensus        73 ~l~~~~iiid~s~   85 (183)
                      .++++..++..+.
T Consensus       255 ~l~~~G~iv~~G~  267 (343)
T PRK09880        255 VTRAKGVMVQVGM  267 (343)
T ss_pred             HhhcCCEEEEEcc
Confidence            5666666666553

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=90.25  E-value=0.49  Score=37.73  Aligned_cols=80  Identities=13%  Similarity=0.177  Sum_probs=46.3

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHH----c-----------CCcccCCHHHHhccCCEEEEecCChHHHHHHh
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAK----E-----------GANMALSLSTLASGAEFIISMLPASQDVLDAY   64 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~----~-----------g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~   64 (183)
                      +|..+.+.|.++.. +++...+++.+..+-..    .           .........+.+.++|+||.++|.... ....
T Consensus        15 iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~DvVf~a~p~~~s-~~~~   93 (349)
T PRK08664         15 VGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEAVDDVDIVFSALPSDVA-GEVE   93 (349)
T ss_pred             HHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHHhcCCCEEEEeCChhHH-HHHH
Confidence            47888888887655 78877555543221111    0           011111122334789999999998644 3332


Q ss_pred             cCCccccccCCCCcEEEeccCCC
Q psy755           65 DGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        65 ~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                         +.   ....|..+||.|+..
T Consensus        94 ---~~---~~~~G~~vIDls~~f  110 (349)
T PRK08664         94 ---EE---FAKAGKPVFSNASAH  110 (349)
T ss_pred             ---HH---HHHCCCEEEECCchh
Confidence               22   234678899999753

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=90.22  E-value=0.98  Score=35.29  Aligned_cols=31  Identities=29%  Similarity=0.383  Sum_probs=26.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      ||..+++.|++.|++|++.+|+.++.+.+.+
T Consensus        18 IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~   48 (322)
T PRK07453         18 VGLYAAKALAKRGWHVIMACRNLKKAEAAAQ   48 (322)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            5889999999999999999999887665543

>PRK08263 short chain dehydrogenase; Provisional

Probab=90.17  E-value=1.4  Score=33.54  Aligned_cols=31  Identities=23%  Similarity=0.381  Sum_probs=26.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+
T Consensus        15 iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~   45 (275)
T PRK08263         15 FGRAWTEAALERGDRVVATARDTATLADLAE   45 (275)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            5889999999999999999999887665543

>KOG0725|consensus

Probab=90.16  E-value=1.1  Score=34.53  Aligned_cols=31  Identities=23%  Similarity=0.384  Sum_probs=27.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      ||+++|..|++.|.+|++.+|++++.+....
T Consensus        20 IG~aia~~la~~Ga~v~i~~r~~~~~~~~~~   50 (270)
T KOG0725|consen   20 IGKAIALLLAKAGAKVVITGRSEERLEETAQ   50 (270)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            6899999999999999999999998766554

>PRK06114 short chain dehydrogenase; Provisional

Probab=90.14  E-value=1.5  Score=32.91  Aligned_cols=24  Identities=38%  Similarity=0.652  Sum_probs=21.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD   24 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~   24 (183)
                      +|.++++.|++.|++|++.+|+++
T Consensus        20 IG~~ia~~l~~~G~~v~~~~r~~~   43 (254)
T PRK06114         20 IGQRIAIGLAQAGADVALFDLRTD   43 (254)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCcc
Confidence            589999999999999999998764

>PRK05650 short chain dehydrogenase; Provisional

Probab=90.12  E-value=1.4  Score=33.35  Aligned_cols=30  Identities=17%  Similarity=0.319  Sum_probs=25.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|+.++.+.+.
T Consensus        12 IG~~la~~l~~~g~~V~~~~r~~~~~~~~~   41 (270)
T PRK05650         12 LGRAIALRWAREGWRLALADVNEEGGEETL   41 (270)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            588999999999999999999987766543

>PRK06398 aldose dehydrogenase; Validated

Probab=90.08  E-value=0.88  Score=34.30  Aligned_cols=25  Identities=24%  Similarity=0.498  Sum_probs=22.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA   25 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~   25 (183)
                      +|.++++.|++.|++|++.+|++..
T Consensus        18 IG~~ia~~l~~~G~~Vi~~~r~~~~   42 (258)
T PRK06398         18 IGKAVVNRLKEEGSNVINFDIKEPS   42 (258)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCccc
Confidence            5899999999999999999988653

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=90.02  E-value=0.59  Score=36.63  Aligned_cols=56  Identities=16%  Similarity=0.209  Sum_probs=38.4

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc-----------CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE-----------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|.++|..|+..+.  +++++|+++++++.....           ......+..+.+++||+||++.-.
T Consensus        10 VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~   78 (307)
T cd05290          10 VGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGP   78 (307)
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCC
Confidence            47889999988876  799999988765332211           112222345678999999998854

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07856 short chain dehydrogenase; Provisional

Probab=90.00  E-value=1.1  Score=33.58  Aligned_cols=25  Identities=28%  Similarity=0.555  Sum_probs=22.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA   25 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~   25 (183)
                      +|..+++.|++.|++|++.+|++++
T Consensus        18 IG~~la~~l~~~g~~v~~~~r~~~~   42 (252)
T PRK07856         18 IGAGIARAFLAAGATVVVCGRRAPE   42 (252)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChhh
Confidence            5899999999999999999998764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=90.00  E-value=1.2  Score=33.01  Aligned_cols=29  Identities=24%  Similarity=0.399  Sum_probs=24.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|++++.+..
T Consensus        17 iG~~~a~~l~~~G~~vi~~~r~~~~~~~~   45 (253)
T PRK08217         17 LGRAMAEYLAQKGAKLALIDLNQEKLEEA   45 (253)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58899999999999999999998765544

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=89.93  E-value=1.5  Score=36.25  Aligned_cols=56  Identities=11%  Similarity=0.157  Sum_probs=39.3

Q ss_pred             CcHHHHHHHHhC-------CC--cEEEEcCCchhHHHHHH--------c--CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKN-------GH--DVIVYDKNTDASQTLAK--------E--GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~-------g~--~V~~~~~~~~~~~~~~~--------~--g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|.++|-.|+..       |.  +++++|++.++++...-        .  .+....+..+.+++||+||++.-.
T Consensus       112 VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kdaDiVVitAG~  186 (444)
T PLN00112        112 ISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQDAEWALLIGAK  186 (444)
T ss_pred             HHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhCcCCEEEECCCC
Confidence            377888888877       55  79999999987643221        1  233234556778999999999854

>PRK06500 short chain dehydrogenase; Provisional

Probab=89.82  E-value=1.7  Score=32.25  Aligned_cols=30  Identities=20%  Similarity=0.387  Sum_probs=25.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|+++..+...
T Consensus        18 iG~~la~~l~~~g~~v~~~~r~~~~~~~~~   47 (249)
T PRK06500         18 IGLETARQFLAEGARVAITGRDPASLEAAR   47 (249)
T ss_pred             HHHHHHHHHHHCCCEEEEecCCHHHHHHHH
Confidence            588999999999999999999887665543

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=89.79  E-value=2  Score=34.25  Aligned_cols=78  Identities=22%  Similarity=0.283  Sum_probs=47.9

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHH-cCCcccCCH-H--------HHh--ccCCEEEEecCChHHHHHHhcCCc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAK-EGANMALSL-S--------TLA--SGAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~-~g~~~~~~~-~--------~~~--~~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      |...+..+...|. +|++.|+++++++.+.+ .+.....+. .        +..  ..+|++|.|+..+..+...     
T Consensus       181 GLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~a-----  255 (350)
T COG1063         181 GLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQA-----  255 (350)
T ss_pred             HHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHH-----
Confidence            4444555556675 78888999999999988 443322221 1        122  2499999999865444333     


Q ss_pred             cccccCCCCcEEEeccCC
Q psy755           69 GILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        69 ~l~~~l~~~~iiid~s~~   86 (183)
                        ...++++-.++..+..
T Consensus       256 --i~~~r~gG~v~~vGv~  271 (350)
T COG1063         256 --LEALRPGGTVVVVGVY  271 (350)
T ss_pred             --HHHhcCCCEEEEEecc
Confidence              3556666665555544

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=89.78  E-value=1.4  Score=33.13  Aligned_cols=27  Identities=26%  Similarity=0.381  Sum_probs=22.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQT   28 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~   28 (183)
                      +|..+++.|++.|++|++.+|+ ++.+.
T Consensus        27 IG~~ia~~l~~~G~~v~~~~~~-~~~~~   53 (258)
T PRK06935         27 LGQGYAVALAKAGADIIITTHG-TNWDE   53 (258)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCC-cHHHH
Confidence            5899999999999999999888 43333

>PRK06484 short chain dehydrogenase; Validated

Probab=89.74  E-value=1.2  Score=37.27  Aligned_cols=73  Identities=12%  Similarity=0.238  Sum_probs=44.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.++|+.|++.|++|++.+|++++.+.+.+...          .....+-.=+.+...++.++   +.+...+.+=.++
T Consensus       281 IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~---~~~~~~~g~id~l  347 (520)
T PRK06484        281 IGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG----------DEHLSVQADITDEAAVESAF---AQIQARWGRLDVL  347 (520)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------CceeEEEccCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            5899999999999999999999887776654210          01111222233445555555   4444433344566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus       348 i~nAg~  353 (520)
T PRK06484        348 VNNAGI  353 (520)
T ss_pred             EECCCC
Confidence            766543

>TIGR00477 tehB tellurite resistance protein TehB

Probab=89.73  E-value=1.3  Score=32.09  Aligned_cols=72  Identities=21%  Similarity=0.320  Sum_probs=42.9

Q ss_pred             HHHHHHhCCCcEEEEcCCchhHHHHHH----cCCccc---CCHH--HHhccCCEEEEecC----ChHHHHHHhcCCcccc
Q psy755            5 MARNLLKNGHDVIVYDKNTDASQTLAK----EGANMA---LSLS--TLASGAEFIISMLP----ASQDVLDAYDGSDGIL   71 (183)
Q Consensus         5 iA~~l~~~g~~V~~~~~~~~~~~~~~~----~g~~~~---~~~~--~~~~~adiVi~~vp----~~~~~~~v~~~~~~l~   71 (183)
                      ++..|++.|++|+++|.|+..++.+.+    .++...   .+..  ..-...|+|+....    +......++   +.+.
T Consensus        44 ~a~~la~~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~I~~~~~~~~~~~~~~~~~l---~~~~  120 (195)
T TIGR00477        44 NSLYLSLAGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAAALNEDYDFIFSTVVFMFLQAGRVPEII---ANMQ  120 (195)
T ss_pred             HHHHHHHCCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhccccCCCCEEEEecccccCCHHHHHHHH---HHHH
Confidence            456677889999999999987765432    232211   1111  11135788876532    123345555   6777


Q ss_pred             ccCCCCcE
Q psy755           72 KHAKPGVI   79 (183)
Q Consensus        72 ~~l~~~~i   79 (183)
                      ..|++|..
T Consensus       121 ~~LkpgG~  128 (195)
T TIGR00477       121 AHTRPGGY  128 (195)
T ss_pred             HHhCCCcE
Confidence            78888765

Part of a tellurite-reducing operon tehA and tehB

>PRK06197 short chain dehydrogenase; Provisional

Probab=89.70  E-value=0.99  Score=34.97  Aligned_cols=29  Identities=24%  Similarity=0.371  Sum_probs=24.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|++++.+.+
T Consensus        28 IG~~~a~~l~~~G~~vi~~~r~~~~~~~~   56 (306)
T PRK06197         28 LGYETAAALAAKGAHVVLAVRNLDKGKAA   56 (306)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58999999999999999999998765543

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=89.62  E-value=2.3  Score=33.67  Aligned_cols=55  Identities=9%  Similarity=0.001  Sum_probs=36.2

Q ss_pred             cHHHHHHHHhCCC-------cEEEEcCCc--hhHHHHH----Hc------CCcccCCHHHHhccCCEEEEecCC
Q psy755            2 GSHMARNLLKNGH-------DVIVYDKNT--DASQTLA----KE------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         2 G~~iA~~l~~~g~-------~V~~~~~~~--~~~~~~~----~~------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      |.++|..|...|.       +++++|+++  ++++...    ..      +.....+..+.+++||+||++--.
T Consensus        16 G~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDvVVitAG~   89 (323)
T TIGR01759        16 GYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVDAALLVGAF   89 (323)
T ss_pred             HHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCCEEEEeCCC
Confidence            7788888887775       799999965  3232211    11      122334566778999999998744

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.62  E-value=1.7  Score=33.15  Aligned_cols=23  Identities=9%  Similarity=0.118  Sum_probs=20.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      +|.++|+.|++.|++|++..|+.
T Consensus        24 IG~aia~~la~~G~~V~l~~r~~   46 (272)
T PRK08159         24 IAWGIAKACRAAGAELAFTYQGD   46 (272)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCch
Confidence            58999999999999998887764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=89.62  E-value=1.4  Score=32.65  Aligned_cols=29  Identities=31%  Similarity=0.442  Sum_probs=24.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|.+.|++|++.+|++++.+..
T Consensus        18 iG~~l~~~l~~~g~~V~~~~r~~~~~~~~   46 (251)
T PRK12826         18 IGRAIAVRLAADGAEVIVVDICGDDAAAT   46 (251)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            48899999999999999999997665443

>PRK07832 short chain dehydrogenase; Provisional

Probab=89.61  E-value=2.2  Score=32.39  Aligned_cols=29  Identities=21%  Similarity=0.393  Sum_probs=24.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++++|+++..+.+
T Consensus        12 iG~~la~~la~~G~~vv~~~r~~~~~~~~   40 (272)
T PRK07832         12 IGRATALRLAAQGAELFLTDRDADGLAQT   40 (272)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58899999999999999999998766554

>PRK08251 short chain dehydrogenase; Provisional

Probab=89.52  E-value=1.3  Score=32.89  Aligned_cols=30  Identities=30%  Similarity=0.547  Sum_probs=25.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        14 iG~~la~~l~~~g~~v~~~~r~~~~~~~~~   43 (248)
T PRK08251         14 LGAGMAREFAAKGRDLALCARRTDRLEELK   43 (248)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766553

>PRK12743 oxidoreductase; Provisional

Probab=89.50  E-value=1.8  Score=32.52  Aligned_cols=75  Identities=16%  Similarity=0.187  Sum_probs=41.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEc-CCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYD-KNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +|..+++.|++.|++|++.. ++.+..+.+.+.       +...-...+++-.-+.++..++.++   +++...+.+=..
T Consensus        14 iG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~~~~~~~~~~---~~~~~~~~~id~   83 (256)
T PRK12743         14 IGKACALLLAQQGFDIGITWHSDEEGAKETAEE-------VRSHGVRAEIRQLDLSDLPEGAQAL---DKLIQRLGRIDV   83 (256)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH-------HHhcCCceEEEEccCCCHHHHHHHH---HHHHHHcCCCCE
Confidence            58999999999999998764 555555444321       0000011223333344555555555   444444444455


Q ss_pred             EEeccC
Q psy755           80 VIDSST   85 (183)
Q Consensus        80 iid~s~   85 (183)
                      ++++..
T Consensus        84 li~~ag   89 (256)
T PRK12743         84 LVNNAG   89 (256)
T ss_pred             EEECCC
Confidence            665554

>PRK05717 oxidoreductase; Validated

Probab=89.48  E-value=1.7  Score=32.53  Aligned_cols=29  Identities=21%  Similarity=0.410  Sum_probs=24.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|++++.+..
T Consensus        22 IG~~~a~~l~~~g~~v~~~~~~~~~~~~~   50 (255)
T PRK05717         22 IGLGIAAWLIAEGWQVVLADLDRERGSKV   50 (255)
T ss_pred             HHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            58999999999999999999988765544

>PRK08628 short chain dehydrogenase; Provisional

Probab=89.47  E-value=1.7  Score=32.55  Aligned_cols=26  Identities=12%  Similarity=0.402  Sum_probs=23.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS   26 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~   26 (183)
                      +|..+++.|++.|++|++.+|++++.
T Consensus        19 iG~~la~~l~~~G~~v~~~~r~~~~~   44 (258)
T PRK08628         19 IGAAISLRLAEEGAIPVIFGRSAPDD   44 (258)
T ss_pred             HHHHHHHHHHHcCCcEEEEcCChhhH
Confidence            58999999999999999999988765

>PRK06483 dihydromonapterin reductase; Provisional

Probab=89.38  E-value=1.9  Score=31.80  Aligned_cols=25  Identities=32%  Similarity=0.440  Sum_probs=22.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA   25 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~   25 (183)
                      +|..+|+.|++.|++|++.+|+++.
T Consensus        14 IG~~ia~~l~~~G~~V~~~~r~~~~   38 (236)
T PRK06483         14 IGLALAWHLLAQGQPVIVSYRTHYP   38 (236)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCchh
Confidence            5899999999999999999998764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=89.38  E-value=2.1  Score=31.83  Aligned_cols=23  Identities=22%  Similarity=0.436  Sum_probs=21.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      +|.++++.|++.|++|++.+|++
T Consensus        17 IG~~ia~~l~~~G~~vi~~~r~~   39 (248)
T TIGR01832        17 LGQGIAVGLAEAGADIVGAGRSE   39 (248)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCch
Confidence            58999999999999999999876

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06484 short chain dehydrogenase; Validated

Probab=89.33  E-value=1.5  Score=36.73  Aligned_cols=31  Identities=23%  Similarity=0.485  Sum_probs=26.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+
T Consensus        17 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~   47 (520)
T PRK06484         17 IGRAACQRFARAGDQVVVADRNVERARERAD   47 (520)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5899999999999999999999887766543

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.33  E-value=2.2  Score=32.15  Aligned_cols=23  Identities=22%  Similarity=0.345  Sum_probs=20.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      ||.++|+.|++.|++|++.+|+.
T Consensus        21 IG~a~a~~la~~G~~v~l~~r~~   43 (256)
T PRK07889         21 IAFHVARVAQEQGAEVVLTGFGR   43 (256)
T ss_pred             HHHHHHHHHHHCCCEEEEecCcc
Confidence            58899999999999999988764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=89.27  E-value=2.4  Score=31.95  Aligned_cols=23  Identities=17%  Similarity=0.261  Sum_probs=20.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      ||.++|+.|++.|++|++.+|+.
T Consensus        21 IG~aia~~la~~G~~v~~~~r~~   43 (257)
T PRK08594         21 IAWGIARSLHNAGAKLVFTYAGE   43 (257)
T ss_pred             HHHHHHHHHHHCCCEEEEecCcc
Confidence            68999999999999999887653

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=89.23  E-value=0.58  Score=37.21  Aligned_cols=79  Identities=14%  Similarity=0.188  Sum_probs=45.3

Q ss_pred             CcHHHHHHHHhCC-CcEEEE-cCCchhHHHHHHc-------CC-------cccCCHHHHhccCCEEEEecCChHHHHHHh
Q psy755            1 MGSHMARNLLKNG-HDVIVY-DKNTDASQTLAKE-------GA-------NMALSLSTLASGAEFIISMLPASQDVLDAY   64 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~-~~~~~~~~~~~~~-------g~-------~~~~~~~~~~~~adiVi~~vp~~~~~~~v~   64 (183)
                      ||..+++.|.+++ +++... ++++..-+.+...       +.       ...+...+...++|+||+++|.....+-. 
T Consensus        12 ~G~~L~~~l~~~~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVf~a~p~~~s~~~~-   90 (341)
T TIGR00978        12 VGQKFVKLLAKHPYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPVASKDVDIVFSALPSEVAEEVE-   90 (341)
T ss_pred             HHHHHHHHHHhCCCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHHHhccCCEEEEeCCHHHHHHHH-
Confidence            5888889888876 476655 5443322222110       00       01111223457899999999986543332 


Q ss_pred             cCCccccccCCCCcEEEeccCC
Q psy755           65 DGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        65 ~~~~~l~~~l~~~~iiid~s~~   86 (183)
                         +   .....|..+||.|+.
T Consensus        91 ---~---~~~~~G~~VIDlsg~  106 (341)
T TIGR00978        91 ---P---KLAEAGKPVFSNASN  106 (341)
T ss_pred             ---H---HHHHCCCEEEECChh
Confidence               2   223468889998876

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PLN02650 dihydroflavonol-4-reductase

Probab=89.15  E-value=0.85  Score=36.07  Aligned_cols=54  Identities=17%  Similarity=0.232  Sum_probs=36.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----C-----------CcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE----G-----------ANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g-----------~~~~~~~~~~~~~adiVi~~v   54 (183)
                      +|+.+++.|++.|++|++.+|++++.+.....    +           +.......++++++|.||-+.
T Consensus        17 IGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~A   85 (351)
T PLN02650         17 IGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHVA   85 (351)
T ss_pred             HHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEeC
Confidence            58999999999999999998887654432211    1           111123456677889888765

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=88.98  E-value=0.95  Score=33.61  Aligned_cols=26  Identities=19%  Similarity=0.196  Sum_probs=22.2

Q ss_pred             HHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            6 ARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         6 A~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +..|++.|++|+++|.|+..++++..
T Consensus        52 a~~LA~~G~~V~avD~s~~Ai~~~~~   77 (218)
T PRK13255         52 MLWLAEQGHEVLGVELSELAVEQFFA   77 (218)
T ss_pred             HHHHHhCCCeEEEEccCHHHHHHHHH
Confidence            45688999999999999999988643

>PRK05875 short chain dehydrogenase; Provisional

Probab=88.97  E-value=2.2  Score=32.32  Aligned_cols=29  Identities=24%  Similarity=0.440  Sum_probs=24.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|++++.+..
T Consensus        19 IG~~la~~l~~~G~~V~~~~r~~~~~~~~   47 (276)
T PRK05875         19 IGKGVAAGLVAAGAAVMIVGRNPDKLAAA   47 (276)
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            58899999999999999999998765544

>PRK06841 short chain dehydrogenase; Provisional

Probab=88.97  E-value=2.3  Score=31.69  Aligned_cols=25  Identities=24%  Similarity=0.461  Sum_probs=22.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA   25 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~   25 (183)
                      +|..+++.|++.|++|++.+|+++.
T Consensus        27 IG~~la~~l~~~G~~Vi~~~r~~~~   51 (255)
T PRK06841         27 IGHAIAELFAAKGARVALLDRSEDV   51 (255)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            5889999999999999999998764

>PRK07831 short chain dehydrogenase; Provisional

Probab=88.93  E-value=2  Score=32.26  Aligned_cols=30  Identities=30%  Similarity=0.402  Sum_probs=25.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+...
T Consensus        30 IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~   59 (262)
T PRK07831         30 IGSATARRALEEGARVVISDIHERRLGETA   59 (262)
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999887765543

>TIGR03567 FMN_reduc_SsuE FMN reductase, SsuE family

Probab=88.85  E-value=6.5  Score=27.80  Aligned_cols=61  Identities=11%  Similarity=0.076  Sum_probs=33.6

Q ss_pred             HHHHHHHhCCCcEEEEcCCchhHHHHHHcC--CcccCCHHHHhccCCEEEEecCCh-----HHHHHHh
Q psy755            4 HMARNLLKNGHDVIVYDKNTDASQTLAKEG--ANMALSLSTLASGAEFIISMLPAS-----QDVLDAY   64 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~adiVi~~vp~~-----~~~~~v~   64 (183)
                      .+...+.+.|+++..+|...-....+....  -.......+-+.+||.||+++|.-     ..+|..+
T Consensus        21 ~~~~~l~~~~~~~~~idl~~l~~~~~~~~~~~~~~~~~l~~~i~~AD~iI~~sP~Y~~sip~~LK~~i   88 (171)
T TIGR03567        21 HVREALQEQGVEVDHLSVRDLPAEDLLFARFDSPAIKAATAQVAQADGVVVATPVYKASYSGVLKALL   88 (171)
T ss_pred             HHHHHHHHCCCeEEEEEecCCChHHhhhcCCCCHHHHHHHHHHHHCCEEEEECCcccCCCCHHHHHHH
Confidence            445556667888777764332222222111  111223445567899999999842     3456555

Members of this protein family use NAD(P)H to reduce FMN and regenerate FMNH2. Members include the homodimeric, NAD(P)H-dependent enzyme SsuE from Escherichia coli, which serves as a partner to an FMNH2-dependent alkanesulfonate monooxygenase. It is induced by sulfate starvation. The NADH-dependent enzyme MsuE from Pseudomonas aeruginosa is outside the scope of this model (see model TIGR03566).

>PLN00015 protochlorophyllide reductase

Probab=88.80  E-value=1.6  Score=34.00  Aligned_cols=30  Identities=20%  Similarity=0.293  Sum_probs=25.8

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~   30 (183)
                      ||.++++.|++.| ++|++.+|+.++.+.+.
T Consensus         9 IG~aia~~l~~~G~~~V~~~~r~~~~~~~~~   39 (308)
T PLN00015          9 LGLATAKALAETGKWHVVMACRDFLKAERAA   39 (308)
T ss_pred             HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            6899999999999 99999999988766544

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=88.76  E-value=3.1  Score=31.10  Aligned_cols=23  Identities=26%  Similarity=0.501  Sum_probs=19.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      +|.++++.|++.|++|++..++.
T Consensus        19 IG~~~a~~l~~~G~~v~~~~~~~   41 (255)
T PRK06463         19 IGRAIAEAFLREGAKVAVLYNSA   41 (255)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCc
Confidence            58999999999999998865443

>PRK07576 short chain dehydrogenase; Provisional

Probab=88.76  E-value=1.8  Score=32.68  Aligned_cols=29  Identities=14%  Similarity=0.303  Sum_probs=24.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|+++..+..
T Consensus        21 IG~~la~~l~~~G~~V~~~~r~~~~~~~~   49 (264)
T PRK07576         21 INLGIAQAFARAGANVAVASRSQEKVDAA   49 (264)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58899999999999999999998765544

>PRK06914 short chain dehydrogenase; Provisional

Probab=88.74  E-value=1.6  Score=33.13  Aligned_cols=30  Identities=27%  Similarity=0.299  Sum_probs=25.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|+++..+...
T Consensus        15 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~   44 (280)
T PRK06914         15 FGLLTTLELAKKGYLVIATMRNPEKQENLL   44 (280)
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=88.73  E-value=0.94  Score=34.04  Aligned_cols=56  Identities=16%  Similarity=0.212  Sum_probs=37.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--CCc-----ccC---CHHHHh-ccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--GAN-----MAL---SLSTLA-SGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--g~~-----~~~---~~~~~~-~~adiVi~~vp~   56 (183)
                      +|+.++..|.+.|++|++..|++++.......  ++.     ..+   +..+.+ ...|+||.+.+.
T Consensus        29 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~   95 (251)
T PLN00141         29 TGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF   95 (251)
T ss_pred             HHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence            48899999999999999999998876544322  121     111   122344 579999988653

>PRK08226 short chain dehydrogenase; Provisional

Probab=88.66  E-value=2  Score=32.20  Aligned_cols=24  Identities=25%  Similarity=0.582  Sum_probs=21.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD   24 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~   24 (183)
                      +|..+++.|++.|++|++.+|+++
T Consensus        18 iG~~la~~l~~~G~~Vv~~~r~~~   41 (263)
T PRK08226         18 IGEGIARVFARHGANLILLDISPE   41 (263)
T ss_pred             HHHHHHHHHHHCCCEEEEecCCHH
Confidence            588999999999999999999875

>PRK05884 short chain dehydrogenase; Provisional

Probab=88.62  E-value=0.55  Score=34.67  Aligned_cols=31  Identities=26%  Similarity=0.455  Sum_probs=26.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.+
T Consensus        12 iG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~   42 (223)
T PRK05884         12 LGRTIAEGFRNDGHKVTLVGARRDDLEVAAK   42 (223)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5899999999999999999999888766544

>PRK06101 short chain dehydrogenase; Provisional

Probab=88.60  E-value=0.54  Score=34.99  Aligned_cols=32  Identities=25%  Similarity=0.448  Sum_probs=27.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE   32 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~   32 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+.
T Consensus        13 iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~   44 (240)
T PRK06101         13 IGKQLALDYAKQGWQVIACGRNQSVLDELHTQ   44 (240)
T ss_pred             HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh
Confidence            58899999999999999999999887766543

>PRK07775 short chain dehydrogenase; Provisional

Probab=88.45  E-value=1.6  Score=33.21  Aligned_cols=29  Identities=21%  Similarity=0.331  Sum_probs=24.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|+++|++|++.+|++++.+.+
T Consensus        22 iG~~la~~L~~~G~~V~~~~r~~~~~~~~   50 (274)
T PRK07775         22 IGAATAIELAAAGFPVALGARRVEKCEEL   50 (274)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58899999999999999999887765543

>PRK05472 redox-sensing transcriptional repressor Rex; Provisional

Probab=88.43  E-value=0.43  Score=35.23  Aligned_cols=57  Identities=19%  Similarity=0.256  Sum_probs=34.4

Q ss_pred             cHHHHHHH--HhCCCcEEE-EcCCchhHHHHHHcC--CcccCCHHHHhc--cCCEEEEecCChHH
Q psy755            2 GSHMARNL--LKNGHDVIV-YDKNTDASQTLAKEG--ANMALSLSTLAS--GAEFIISMLPASQD   59 (183)
Q Consensus         2 G~~iA~~l--~~~g~~V~~-~~~~~~~~~~~~~~g--~~~~~~~~~~~~--~adiVi~~vp~~~~   59 (183)
                      |..++..+  ...|+++++ +|+++++..... .+  +...+++.+.++  +.|.|++|+|....
T Consensus        96 G~~l~~~~~~~~~g~~ivgv~D~d~~~~~~~i-~g~~v~~~~~l~~li~~~~iD~ViIa~P~~~~  159 (213)
T PRK05472         96 GRALLNYNGFEKRGFKIVAAFDVDPEKIGTKI-GGIPVYHIDELEEVVKENDIEIGILTVPAEAA  159 (213)
T ss_pred             HHHHHHhhhcccCCcEEEEEEECChhhcCCEe-CCeEEcCHHHHHHHHHHCCCCEEEEeCCchhH
Confidence            55565542  345788775 688876543222 12  222345666665  49999999998543

>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional

Probab=88.38  E-value=13  Score=31.09  Aligned_cols=84  Identities=10%  Similarity=-0.009  Sum_probs=49.9

Q ss_pred             cCCEEEEecCC-----hHHHHHHhcCCccccccCCCCcEEEeccCC--CchhHHHHHHHHHhcCCcEEeecccCCHHHHh
Q psy755           46 GAEFIISMLPA-----SQDVLDAYDGSDGILKHAKPGVIVIDSSTV--DPQVPQTLSNLAREKQITFLDAPVSGGTKAAQ  118 (183)
Q Consensus        46 ~adiVi~~vp~-----~~~~~~v~~~~~~l~~~l~~~~iiid~s~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  118 (183)
                      ++|.|++..|.     ...+...+   +.+...-.+|+.+.-.+|.  .......+.+.+...|+..+.           
T Consensus       304 ~ad~vilGspT~~~~~~p~~~~fl---~~l~~~~l~gK~~~vFGSygw~g~a~~~~~~~l~~~g~~~~~-----------  369 (479)
T PRK05452        304 RSKGVLVGSSTMNNVMMPKIAGLL---EEITGLRFRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSL-----------  369 (479)
T ss_pred             hCCEEEEECCccCCcchHHHHHHH---HHhhccCcCCCEEEEEECCCcCcHHHHHHHHHHHHCCCEEec-----------
Confidence            69999999986     23345555   4554443467766544443  234556677777777877642           


Q ss_pred             cCceEEEecCCHHHHHHHHHHHHHhcC
Q psy755          119 EATLTFMVGGDKSSLEKAKPILKCMGR  145 (183)
Q Consensus       119 ~~~~~~~~~g~~~~~~~~~~l~~~~g~  145 (183)
                        ...+-...+++..++++++-+.+..
T Consensus       370 --~l~~~~~P~ee~~~~~~~~g~~la~  394 (479)
T PRK05452        370 --SLKAKWRPDQDALELCREHGREIAR  394 (479)
T ss_pred             --cEEEEecCCHHHHHHHHHHHHHHHH
Confidence              1222223455666777776666653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=88.37  E-value=1.8  Score=32.16  Aligned_cols=29  Identities=28%  Similarity=0.533  Sum_probs=23.2

Q ss_pred             CcHHHHHHHHhCCCcEEE-EcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIV-YDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~-~~~~~~~~~~~   29 (183)
                      +|..+++.|.++|++|++ .+|++++.+.+
T Consensus        16 iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~   45 (250)
T PRK08063         16 IGKAIALRLAEEGYDIAVNYARSRKAAEET   45 (250)
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Confidence            588999999999999876 57887765543

>PRK15076 alpha-galactosidase; Provisional

Probab=88.34  E-value=0.66  Score=38.15  Aligned_cols=45  Identities=11%  Similarity=0.248  Sum_probs=33.3

Q ss_pred             CCcEEEEcCCchhHHHHHH--------cC----CcccCCHHHHhccCCEEEEecCCh
Q psy755           13 GHDVIVYDKNTDASQTLAK--------EG----ANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus        13 g~~V~~~~~~~~~~~~~~~--------~g----~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +.+|+++|+++++.+...+        .+    +..+++..+++++||+||+++-.+
T Consensus        30 ~~evvLvDid~er~~~~~~l~~~~~~~~~~~~~i~~ttD~~eal~dADfVv~ti~vg   86 (431)
T PRK15076         30 DAEIALMDIDPERLEESEIVARKLAESLGASAKITATTDRREALQGADYVINAIQVG   86 (431)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEEEECCHHHHhCCCCEEeEeeeeC
Confidence            4589999999988764322        12    334567788899999999998664

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=88.33  E-value=2  Score=32.22  Aligned_cols=24  Identities=21%  Similarity=0.343  Sum_probs=21.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD   24 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~   24 (183)
                      +|.++++.|++.|++|++.+|++.
T Consensus        20 IG~~la~~l~~~G~~v~~~~r~~~   43 (260)
T PRK12823         20 IGRGVALRAAAEGARVVLVDRSEL   43 (260)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCchH
Confidence            589999999999999999999853

>PRK07069 short chain dehydrogenase; Validated

Probab=88.32  E-value=2.5  Score=31.34  Aligned_cols=29  Identities=24%  Similarity=0.472  Sum_probs=23.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCC-chhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKN-TDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~-~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|+ ++..+.+
T Consensus        11 iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~   40 (251)
T PRK07069         11 LGRAIARRMAEQGAKVFLTDINDAAGLDAF   40 (251)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCcchHHHHH
Confidence            5899999999999999999998 5554443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=88.24  E-value=2  Score=32.26  Aligned_cols=23  Identities=30%  Similarity=0.420  Sum_probs=20.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      +|.++|+.|++.|++|++.+|+.
T Consensus        20 IG~aia~~l~~~G~~vv~~~~~~   42 (251)
T PRK12481         20 LGQGMAIGLAKAGADIVGVGVAE   42 (251)
T ss_pred             HHHHHHHHHHHCCCEEEEecCch
Confidence            58999999999999999988864

>PRK06181 short chain dehydrogenase; Provisional

Probab=88.23  E-value=2  Score=32.23  Aligned_cols=29  Identities=21%  Similarity=0.423  Sum_probs=24.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|++++.+.+
T Consensus        13 iG~~la~~l~~~g~~Vi~~~r~~~~~~~~   41 (263)
T PRK06181         13 IGRALAVRLARAGAQLVLAARNETRLASL   41 (263)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            47889999999999999999998776554

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=88.17  E-value=5.3  Score=29.66  Aligned_cols=79  Identities=22%  Similarity=0.302  Sum_probs=46.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-c----CCHHHH-----hccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-A----LSLSTL-----ASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-~----~~~~~~-----~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      +|..+++.+...|.+|++.++++++.+.+.+.|... .    .+..+.     -...|+++.+++........       
T Consensus       146 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~-------  218 (271)
T cd05188         146 VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQA-------  218 (271)
T ss_pred             HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHH-------
Confidence            356677777778999999999988877776554311 1    111111     14578888888653333333       


Q ss_pred             cccCCCCcEEEeccCC
Q psy755           71 LKHAKPGVIVIDSSTV   86 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~   86 (183)
                      ...+.++..+++.+..
T Consensus       219 ~~~l~~~G~~v~~~~~  234 (271)
T cd05188         219 LRLLRPGGRIVVVGGT  234 (271)
T ss_pred             HHhcccCCEEEEEccC
Confidence            3345555555555543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=88.16  E-value=1.2  Score=34.72  Aligned_cols=55  Identities=15%  Similarity=0.163  Sum_probs=36.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH---H-cC-----------CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA---K-EG-----------ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~---~-~g-----------~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|.+.|++|++.+|++++.+...   . .+           +...++..++++..|+||-+..
T Consensus        17 IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~   86 (325)
T PLN02989         17 IASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHTAS   86 (325)
T ss_pred             HHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEeCC
Confidence            589999999999999998888876433221   1 01           1112234556778899888763

>PLN02686 cinnamoyl-CoA reductase

Probab=88.09  E-value=0.84  Score=36.58  Aligned_cols=29  Identities=21%  Similarity=0.394  Sum_probs=23.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|+.+++.|++.|++|++..|+.++.+.+
T Consensus        65 IG~~lv~~L~~~G~~V~~~~r~~~~~~~l   93 (367)
T PLN02686         65 LGLAIVDRLLRHGYSVRIAVDTQEDKEKL   93 (367)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58999999999999999888876655443

>PRK08309 short chain dehydrogenase; Provisional

Probab=88.05  E-value=3.9  Score=29.27  Aligned_cols=30  Identities=17%  Similarity=0.158  Sum_probs=24.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      ||..+++.|.+.|++|.+.+|++++.+.+.
T Consensus        11 ~gg~la~~L~~~G~~V~v~~R~~~~~~~l~   40 (177)
T PRK08309         11 MLKRVSLWLCEKGFHVSVIARREVKLENVK   40 (177)
T ss_pred             HHHHHHHHHHHCcCEEEEEECCHHHHHHHH
Confidence            466799999999999999999987766543

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=88.04  E-value=2.2  Score=31.52  Aligned_cols=29  Identities=34%  Similarity=0.476  Sum_probs=23.2

Q ss_pred             CcHHHHHHHHhCCCcEEE-EcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIV-YDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~-~~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++ +.|++++.+..
T Consensus        13 iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~   42 (247)
T PRK09730         13 IGRATALLLAQEGYTVAVNYQQNLHAAQEV   42 (247)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCChHHHHHH
Confidence            588999999999999876 67887665543

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=87.99  E-value=1.6  Score=33.81  Aligned_cols=55  Identities=15%  Similarity=0.160  Sum_probs=36.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH---HHc-----C-------CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL---AKE-----G-------ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~---~~~-----g-------~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|.+.|++|++.+|++......   ...     .       +.......++++++|+||-+..
T Consensus        16 IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~   85 (322)
T PLN02662         16 IASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHTAS   85 (322)
T ss_pred             HHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEeCC
Confidence            58899999999999999988876543221   111     1       1111234566778998888763

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=87.91  E-value=6.3  Score=30.81  Aligned_cols=99  Identities=16%  Similarity=0.201  Sum_probs=64.9

Q ss_pred             HHHHHHhCCC-cEEEEcCCchhHHHHHHc----CCc------ccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            5 MARNLLKNGH-DVIVYDKNTDASQTLAKE----GAN------MALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         5 iA~~l~~~g~-~V~~~~~~~~~~~~~~~~----g~~------~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ++...++.|. +|+++|.+|-.++.+.+.    ++.      ......... ...|+|+--+ -...+..+.   +.+..
T Consensus       176 LaIAa~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANI-LA~vl~~La---~~~~~  251 (300)
T COG2264         176 LAIAAAKLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANI-LAEVLVELA---PDIKR  251 (300)
T ss_pred             HHHHHHHcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehh-hHHHHHHHH---HHHHH
Confidence            3444567777 599999999887766542    333      111222223 3799999988 335566665   88888


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEee
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      .+++|..+|-++ ........+.+.+...|+..+.+
T Consensus       252 ~lkpgg~lIlSG-Il~~q~~~V~~a~~~~gf~v~~~  286 (300)
T COG2264         252 LLKPGGRLILSG-ILEDQAESVAEAYEQAGFEVVEV  286 (300)
T ss_pred             HcCCCceEEEEe-ehHhHHHHHHHHHHhCCCeEeEE
Confidence            999988877544 44444667777777777766653

>PF10728 DUF2520: Domain of unknown function (DUF2520); InterPro: IPR018931 This presumed domain is found C-terminal to a Rossmann-like domain suggesting that these proteins are oxidoreductases

Probab=87.84  E-value=5.2  Score=27.21  Aligned_cols=56  Identities=20%  Similarity=0.232  Sum_probs=35.8

Q ss_pred             EEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHH--HHHHHHHHHHHHHHHHHHHH
Q psy755          123 TFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQV--AKLCNNMLLGVTMMGVAEAM  178 (183)
Q Consensus       123 ~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~--~k~~~~~~~~~~~~~~~E~~  178 (183)
                      .+.+.|+++..+.++++++.+|.+++.+.+.....+  .-.+-+.+....+....|.+
T Consensus         3 ~~~iEgd~~~~~~l~~l~~~lg~~~~~i~~~~r~~yHaAav~asNf~~~L~~~a~~ll   60 (132)
T PF10728_consen    3 PFAIEGDEEALEVLQELAKELGGRPFEIDSEQRALYHAAAVFASNFLVALYALAAELL   60 (132)
T ss_dssp             -EEEEESHHHHHHHHHHHHHTTSEEEE--GGGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCHHHHHHHHHHHHHhCCceEEeCHHhHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            455667999999999999999999999887555544  44433344444444444443

; PDB: 3D1L_A 2I76_A 3DFU_A.

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=87.81  E-value=2.8  Score=31.10  Aligned_cols=29  Identities=17%  Similarity=0.209  Sum_probs=22.1

Q ss_pred             CcHHHHHHHHhCCCcEEEE-cCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVY-DKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~-~~~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++. .|++++.+..
T Consensus        14 iG~~la~~l~~~g~~v~~~~~~~~~~~~~~   43 (248)
T PRK06947         14 IGRATAVLAAARGWSVGINYARDAAAAEET   43 (248)
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence            5889999999999998764 5666654443

>TIGR01081 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase

Probab=87.77  E-value=1.6  Score=35.94  Aligned_cols=101  Identities=13%  Similarity=0.136  Sum_probs=57.6

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchh--HHHHHHcCCccc--CCHHHHhccCCEEEEec--CCh-HHHHHHhc------CCcc
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDA--SQTLAKEGANMA--LSLSTLASGAEFIISML--PAS-QDVLDAYD------GSDG   69 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~--~~~~~~~g~~~~--~~~~~~~~~adiVi~~v--p~~-~~~~~v~~------~~~~   69 (183)
                      .++|+.|.+.|++|+++|.++..  .+.+.+.|+...  .+......++|+||..-  |+. ..+.....      +.-+
T Consensus        13 ~~la~~l~~~G~~V~~~D~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~d~vV~SpgI~~~~~~~~~a~~~~i~v~~~~e   92 (448)
T TIGR01081        13 GGLAMIAKQLGHEVTGSDANVYPPMSTQLEAQGIEIIEGFDAAQLEPKPDLVVIGNAMKRGNPCVEAVLNLNLPYTSGPQ   92 (448)
T ss_pred             HHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEeCCCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEeHHH
Confidence            47899999999999999976532  234555576543  23444445799888754  222 22222210      0011


Q ss_pred             cc-ccCCCCc--EEEeccCCCchhHHHHHHHHHhcCC
Q psy755           70 IL-KHAKPGV--IVIDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        70 l~-~~l~~~~--iiid~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      +. ..+.+.+  +-|-.|+++..+..-+...+...|.
T Consensus        93 ~~~~~~~~~~~~I~ITGT~GKTTTt~li~~iL~~~g~  129 (448)
T TIGR01081        93 WLHDFVLHDRWVLAVAGTHGKTTTASMLAWVLEQCGL  129 (448)
T ss_pred             HHHHHHhcCCCEEEEECCCcHHHHHHHHHHHHHhcCC
Confidence            22 2222333  3456666777777777777776553

Alternate name: murein tripeptide ligase

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	183
2i9p_A	319	Crystal Structure Of Human Hydroxyisobutyrate Dehyd		3e-46
2gf2_A	296	Crystal Structure Of Human Hydroxyisobutyrate Dehyd		3e-46
3obb_A	300	Crystal Structure Of A Possible 3-Hydroxyisobutyrat		2e-34
3q3c_A	299	Crystal Structure Of A Serine Dehydrogenase From Ps		2e-34
3cky_A	301	Structural And Kinetic Properties Of A Beta-Hydroxy		1e-30
1vpd_A	299	X-Ray Crystal Structure Of Tartronate Semialdehyde		3e-28
1wp4_A	289	Structure Of Tt368 Protein From Thermus Thermophilu		2e-23
3pef_A	287	Crystal Structure Of Gamma-Hydroxybutyrate Dehydrog		3e-23
2cvz_A	289	Structure Of Hydroxyisobutyrate Dehydrogenase From		3e-22
3pdu_A	287	Crystal Structure Of Gamma-Hydroxybutyrate Dehydrog		5e-22
4dll_A	320	Crystal Structure Of A 2-Hydroxy-3-Oxopropionate Re		3e-19
1yb4_A	295	Crystal Structure Of The Tartronic Semialdehyde Red		3e-19
3doj_A	310	Structure Of Glyoxylate Reductase 1 From Arabidopsi		1e-18
2uyy_A	316	Structure Of The Cytokine-Like Nuclear Factor N-Pac		4e-18
3qha_A	296	Crystal Structure Of A Putative Oxidoreductase From		5e-15
3g0o_A	303	Crystal Structure Of 3-Hydroxyisobutyrate Dehydroge		6e-11
4e21_A	358	The Crystal Structure Of 6-Phosphogluconate Dehydro		4e-10
4gbj_A	297	Crystal Structure Of Nad-Binding 6-Phosphogluconate		4e-07
2w90_A	471	Geobacillus Stearothermophilus 6-Phosphogluconate D		2e-06
2w8z_A	470	Geobacillus Stearothermophilus 6-Phosphogluconate D		2e-06
2iz0_A	474	Pex Inhibitor-Home Data Length = 474		2e-05
2iyp_A	473	Product Rup Length = 473		2e-05
2iyo_A	472	Structural Characterization Of A Bacterial 6pdh Rev		2e-05
2zyg_A	480	Apo-Form Of Dimeric 6-Phosphogluconate Dehydrogenas		3e-05

>pdb|2I9P|A Chain A, Crystal Structure Of Human Hydroxyisobutyrate Dehydrogenase Complexed With Nad+ Length = 319

Iteration: 1
 Score =  181 bits (458), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 87/183 (47%), Positives = 124/183 (67%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct: 33  MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINA 92
Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct: 93  IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 152
Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct: 153 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 212
Query: 181 GVK 183
           G++
Sbjct: 213 GIR 215

>pdb|2GF2|A Chain A, Crystal Structure Of Human Hydroxyisobutyrate Dehydrogenase Length = 296

Iteration: 1
 Score =  181 bits (458), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 87/183 (47%), Positives = 124/183 (67%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct: 11  MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINA 70
Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct: 71  IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 130
Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct: 131 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 190
Query: 181 GVK 183
           G++
Sbjct: 191 GIR 193

>pdb|3OBB|A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 Length = 300

Iteration: 1
 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/181 (48%), Positives = 109/181 (60%)
Query: 2   GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVL 61
           G+  A NLLK G+ + V+D    A   L   GA+ A S      GA+ +IS LPASQ V 
Sbjct: 15  GAPXATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISXLPASQHVE 74
Query: 62  DAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEAT 121
             Y   DG+L H  PG +V++ ST+ P   + +   ARE+ +  LDAPVSGGT  A   T
Sbjct: 75  GLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAXLDAPVSGGTAGAAAGT 134
Query: 122 LTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG 181
           LTF VGGD  +LEKA+P+ +  GRNI H G  G GQVAK+CNN LL V  +G AEA  LG
Sbjct: 135 LTFXVGGDAEALEKARPLFEAXGRNIFHAGPDGAGQVAKVCNNQLLAVLXIGTAEAXALG 194
Query: 182 V 182
           V
Sbjct: 195 V 195

>pdb|3Q3C|A Chain A, Crystal Structure Of A Serine Dehydrogenase From Pseudomonas Aeruginosa Pao1 In Complex With Nad Length = 299

Iteration: 1
 Score =  142 bits (357), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/181 (48%), Positives = 109/181 (60%)
Query: 2   GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVL 61
           G+  A NLLK G+ + V+D    A   L   GA+ A S      GA+ +IS LPASQ V 
Sbjct: 14  GAPXATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISXLPASQHVE 73
Query: 62  DAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEAT 121
             Y   DG+L H  PG +V++ ST+ P   + +   ARE+ +  LDAPVSGGT  A   T
Sbjct: 74  GLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAXLDAPVSGGTAGAAAGT 133
Query: 122 LTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG 181
           LTF VGGD  +LEKA+P+ +  GRNI H G  G GQVAK+CNN LL V  +G AEA  LG
Sbjct: 134 LTFXVGGDAEALEKARPLFEAXGRNIFHAGPDGAGQVAKVCNNQLLAVLXIGTAEAXALG 193
Query: 182 V 182
           V
Sbjct: 194 V 194

>pdb|3CKY|A Chain A, Structural And Kinetic Properties Of A Beta-Hydroxyacid Dehydrogenase Involved In Nicotinate Fermentation Length = 301

Iteration: 1
 Score =  129 bits (324), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/183 (39%), Positives = 106/183 (57%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MA NLLK G  V  +D        +  +GA    +   +A+ ++ I + LP +  V
Sbjct: 15  MGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIV 74
Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
               +G  G+L   K G +++D S+V P     ++ +A EK I ++DAPVSGGTK A+  
Sbjct: 75  ETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAG 134
Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLT MVG  ++  EK +P+L  +G++I H GD+G G   K+ NN+LLG  M  +AEA+ L
Sbjct: 135 TLTIMVGASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVL 194
Query: 181 GVK 183
           GVK
Sbjct: 195 GVK 197

>pdb|1VPD|A Chain A, X-Ray Crystal Structure Of Tartronate Semialdehyde Reductase [salmonella Typhimurium Lt2] Length = 299

Iteration: 1
 Score =  120 bits (302), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 104/182 (57%)
Query: 2   GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVL 61
           G   ++NLLK G+ ++V D+N +A   +   GA  A +   +A   + II+ LP S  V 
Sbjct: 17  GKPXSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITXLPNSPHVK 76
Query: 62  DAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEAT 121
           +   G +GI++ AKPG ++ID S++ P   + +S+  + K +  LDAPVSGG   A + T
Sbjct: 77  EVALGENGIIEGAKPGTVLIDXSSIAPLASREISDALKAKGVEXLDAPVSGGEPKAIDGT 136
Query: 122 LTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG 181
           L+  VGGDK+  +K   + K    ++VH GD G G V KL N +++ + +   +EA+ L 
Sbjct: 137 LSVXVGGDKAIFDKYYDLXKAXAGSVVHTGDIGAGNVTKLANQVIVALNIAAXSEALTLA 196
Query: 182 VK 183
            K
Sbjct: 197 TK 198

>pdb|1WP4|A Chain A, Structure Of Tt368 Protein From Thermus Thermophilus Hb8 Length = 289

Iteration: 1
 Score =  105 bits (261), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 96/178 (53%), Gaps = 10/178 (5%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           M  H+AR         +V+++  + +    +E  + A+ L  +A  A  I + LP +++V
Sbjct: 16  MAGHLARRF-----PTLVWNRTFEKALRHQEEFGSEAVPLERVAE-ARVIFTCLPTTREV 69
Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
              Y+ ++ +  + + G   +D+++ +P+  + L+   REK +T+LDAPVSGGT  A+  
Sbjct: 70  ---YEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAG 126
Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAM 178
           TLT M+GG + ++E+ +P L    + +VH G  G G   K  NN LL V +    E +
Sbjct: 127 TLTVMLGGPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGL 183

>pdb|3PEF|A Chain A, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase From Geobacter Metallireducens In Complex With Nadp+ Length = 287

Iteration: 1
 Score =  104 bits (259), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 94/183 (51%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGS MA+NL+K G  V +++++ + ++ LA  GA  A +   +        +ML      
Sbjct: 12  MGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPXEVVESCPVTFAMLADPAAA 71
Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G  G+L+    G   +D STVDP   Q +      K   FL+APVSG  K A++ 
Sbjct: 72  EEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDG 131
Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL  +  GD++  ++A P  + MG+ I+H GD G G   KL  NM++G  M    E + L
Sbjct: 132 TLIILAAGDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLAL 191
Query: 181 GVK 183
           G K
Sbjct: 192 GEK 194

>pdb|2CVZ|A Chain A, Structure Of Hydroxyisobutyrate Dehydrogenase From Thermus Thermophilus Hb8 Length = 289

Iteration: 1
 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 94/175 (53%), Gaps = 10/175 (5%)
Query: 4   HMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDA 63
           H+AR         +V+++  + +    +E  + A+ L  +A  A  I + LP +++V   
Sbjct: 19  HLARRF-----PTLVWNRTFEKALRHQEEFGSEAVPLERVAE-ARVIFTCLPTTREV--- 69
Query: 64  YDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLT 123
           Y+ ++ +  + + G   +D+++ +P+  + L+   REK +T+LDAPVSGGT  A+  TLT
Sbjct: 70  YEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLT 129
Query: 124 FMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAM 178
             +GG + ++E+ +P L    + +VH G  G G   K  NN LL V +    E +
Sbjct: 130 VXLGGPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGL 183

>pdb|3PDU|A Chain A, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase From Geobacter Sulfurreducens In Complex With Nadp+ Length = 287

Iteration: 1
 Score =  100 bits (249), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 90/181 (49%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MA NL++ G DV V+++N      L   GA  A S + + +  +  I+ML      
Sbjct: 12  MGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAA 71
Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G++G+L+    G   ID STVD +    +      +   FL+APVSG  K A++ 
Sbjct: 72  REVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDG 131
Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL  +  GD+S    A P    +G+  +H G+ G G   KL  NM++G  M  + E M L
Sbjct: 132 TLIILAAGDQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMAL 191
Query: 181 G 181
           G
Sbjct: 192 G 192

>pdb|4DLL|A Chain A, Crystal Structure Of A 2-Hydroxy-3-Oxopropionate Reductase From Polaromonas Sp. Js666 Length = 320

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 8/181 (4%)
Query: 6   ARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLP---ASQDVLD 62
           AR L + G+ + V+++    + +LA  GA +       A  A+ ++S L      QDVL 
Sbjct: 47  ARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSXLENGAVVQDVLF 106
Query: 63  AYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATL 122
           A     G+    KPG + +D +++ P+  +  +       I  LD PVSGGT  A++ TL
Sbjct: 107 A----QGVAAAXKPGSLFLDXASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTL 162
Query: 123 TFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV 182
               GG  +  E++ P+LK  GR   H G  G+GQ+ KL N  ++G+T+  VAEA+    
Sbjct: 163 VIXAGGKPADFERSLPLLKVFGRA-THVGPHGSGQLTKLANQXIVGITIGAVAEALLFAT 221
Query: 183 K 183
           K
Sbjct: 222 K 222

>pdb|1YB4|A Chain A, Crystal Structure Of The Tartronic Semialdehyde Reductase From Salmonella Typhimurium Lt2 Length = 295

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 1/182 (0%)
Query: 2   GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVL 61
           GS  A NL + GH + V      A + L+    N+  +   +   A+ I   +P +  V 
Sbjct: 15  GSPXAINLARAGHQLHVTTIGPVADELLSLGAVNVETA-RQVTEFADIIFIXVPDTPQVE 73
Query: 62  DAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEAT 121
           D   G  G  K +  G  ++D S++ P   +  +    E    +LDAPVSGG   A+E T
Sbjct: 74  DVLFGEHGCAKTSLQGKTIVDXSSISPIETKRFAQRVNEXGADYLDAPVSGGEIGAREGT 133
Query: 122 LTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG 181
           L+  VGG++   ++ KP+   +G+NI   G +G+GQ  K+ N +++ + +  V+EA+   
Sbjct: 134 LSIXVGGEQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFA 193
Query: 182 VK 183
            K
Sbjct: 194 SK 195

>pdb|3DOJ|A Chain A, Structure Of Glyoxylate Reductase 1 From Arabidopsis (Atglyr1) Length = 310

Iteration: 1
 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 88/183 (48%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  M+ NLLKNG  V V+++       L + GA++  S + +    ++ I+ML      
Sbjct: 32  MGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAA 91
Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           L       G+L+    G   ID STVD +    ++     K   F++ PVSG  K A++ 
Sbjct: 92  LSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDG 151
Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            L  +  GDK+  E++ P    +G+   + G  GNG   KL  NM++G  M   +E + L
Sbjct: 152 QLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVL 211
Query: 181 GVK 183
             K
Sbjct: 212 ADK 214

>pdb|2UYY|A Chain A, Structure Of The Cytokine-Like Nuclear Factor N-Pac Length = 316

Iteration: 1
 Score = 87.4 bits (215), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 84/180 (46%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGS +  NLLK GH V V+++  +      +EGA +  + + + S  +   + +   +  
Sbjct: 41  MGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAA 100
Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            D   G  G+L+  +PG   +D STVD      L+ +   +   FL+APVSG  + + + 
Sbjct: 101 KDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDG 160
Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            L  +  GD+   E      + MG+     G+ GN     L  NM+ G  M  +AE + L
Sbjct: 161 MLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTL 220

>pdb|3QHA|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Mycobacterium Avium 104 Length = 296

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQ-- 58
           MG+ MA  + +    V VYD   +A   LA+ GA +A S++ +A+     I++L  +Q  
Sbjct: 26  MGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDAQVR 85
Query: 59  DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQ 118
           +V+    G      HAKPG ++   ST+       L+   + + I  +DAPVSGG  AA 
Sbjct: 86  EVVGELAG------HAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAA 139
Query: 119 EATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAM 178
              L  MVG D+   E+ KP  K     ++H G+ G G   KL  NML   +     EAM
Sbjct: 140 RGELATMVGADREVYERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAM 199
Query: 179 NL 180
            L
Sbjct: 200 KL 201

>pdb|3G0O|A Chain A, Crystal Structure Of 3-Hydroxyisobutyrate Dehydrogenase (Ygbj) From Salmonella Typhimurium Length = 303

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Query: 6   ARNLLKNGHDVIVYDKNTDASQTLAKEGA-NMALSLSTLASGAEFIISMLPASQDVLDAY 64
           AR+ L+ G      D N  A   L  EGA   A S    A   + ++ ++  +  V    
Sbjct: 23  ARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVL 82
Query: 65  DGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTF 124
            G DG+    KPG  V  SST+     Q ++       +  LDAPVSGG   A +   T 
Sbjct: 83  FGEDGVAHLXKPGSAVXVSSTISSADAQEIAAALTALNLNXLDAPVSGGAVKAAQGEXTV 142
Query: 125 MVGGDKSSLEKAKPILKCMGRNIVHCGDS-GNGQVAKLCNNMLLGV 169
              G +++  + KP+L  +  N+    D+ G G   K+ + +L GV
Sbjct: 143 XASGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGV 188

>pdb|4E21|A Chain A, The Crystal Structure Of 6-Phosphogluconate Dehydrogenase From Geobacter Metallireducens Length = 358

Iteration: 1
 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 7   RNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS---GAEFIISMLPASQDVLDA 63
           R L K GH+ +VYD N +A Q L +EG   A S+    +       +   +PA+  V+D+
Sbjct: 39  RRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLXVPAA--VVDS 96
Query: 64  YDGSDGILKHAKPGV----IVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQE 119
                  L+   P +    IVID      Q     ++  R + IT++D   SGG     E
Sbjct: 97  ------XLQRXTPLLAANDIVIDGGNSHYQDDIRRADQXRAQGITYVDVGTSGGIFGL-E 149
Query: 120 ATLTFMVGGDKSSLEKAKPILKCM-----------GRN---------IVHCGDSGNGQVA 159
                 +GG+K ++E+  P+ + +           GR           +HCG SG G   
Sbjct: 150 RGYCLXIGGEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFV 209
Query: 160 KLCNNMLLGVTMMGVAEAMNL 180
           K  +N +        AE +N+
Sbjct: 210 KXVHNGIEYGLXAAYAEGLNI 230

>pdb|4GBJ|A Chain A, Crystal Structure Of Nad-Binding 6-Phosphogluconate Dehydrogenase From Dyadobacter Fermentans Length = 297

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           +G+ +A  LL+ G++++V+++    ++ L K GA +  +     +    + S+L     V
Sbjct: 16  LGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAV 75
Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            + +   + + K  K GV V   ST+ P+  + L+ +       ++ AP+    +A +  
Sbjct: 76  EELFS-XELVEKLGKDGVHV-SXSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAK 133
Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCG-DSGNGQVAKLCNNMLLGVTMMGVAEAMN 179
                + G+  + E+ KPI++   + +   G D G   V KL  N  +  ++    EA  
Sbjct: 134 VGNICLSGNAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFXIACSLEXXGEAFT 193
Query: 180 LGVK 183
              K
Sbjct: 194 XAEK 197

>pdb|2W90|A Chain A, Geobacillus Stearothermophilus 6-Phosphogluconate Dehydrogenase With Bound 6-Phosphogluconate Length = 471

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--GANMALSLSTLASGAEFIISMLPASQ 58
           MG ++A N+   G+ V VY++  + +    +E  G N+  + S      EF+ ++    +
Sbjct: 16  MGKNLALNIESKGYSVAVYNRLREKTDEFLQEAKGKNIVGTYSI----EEFVNALEKPRK 71
Query: 59  DVLDAYDG--SDGILKHAKP----GVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG 112
            +L    G  +D  ++  KP    G IVID      +  Q  +    E  I F+   VSG
Sbjct: 72  ILLMVKAGAPTDATIEQLKPHLEKGDIVIDGGNTYFKDTQRRNKELAELGIHFIGTGVSG 131
Query: 113 GTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNI------VHCGDSGNGQVAKLCNNML 166
           G + A +   + M GG K + E  +PI + +   +       + G  G G   K+ +N +
Sbjct: 132 GEEGALKGP-SIMPGGQKEAHELVRPIFEAIAAKVDGEPCTTYIGPDGAGHYVKMVHNGI 190
Query: 167 LGVTMMGVAEAMNL 180
               M  +AEA  L
Sbjct: 191 EYGDMQLIAEAYFL 204

>pdb|2W8Z|A Chain A, Geobacillus Stearothermophilus 6-Phosphogluconate Dehydrogenase With Bound 6-Phosphogluconate Length = 470

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--GANMALSLSTLASGAEFIISMLPASQ 58
           MG ++A N+   G+ V VY++  + +    +E  G N+  + S      EF+ ++    +
Sbjct: 15  MGKNLALNIESKGYSVAVYNRLREKTDEFLQEAKGKNIVGTYSI----EEFVNALEKPRK 70
Query: 59  DVLDAYDG--SDGILKHAKP----GVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG 112
            +L    G  +D  ++  KP    G IVID      +  Q  +    E  I F+   VSG
Sbjct: 71  ILLMVKAGAPTDATIEQLKPHLEKGDIVIDGGNTYFKDTQRRNKELAELGIHFIGTGVSG 130
Query: 113 GTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNI------VHCGDSGNGQVAKLCNNML 166
           G + A +   + M GG K + E  +PI + +   +       + G  G G   K+ +N +
Sbjct: 131 GEEGALKGP-SIMPGGQKEAHELVRPIFEAIAAKVDGEPCTTYIGPDGAGHYVKMVHNGI 189
Query: 167 LGVTMMGVAEAMNL 180
               M  +AEA  L
Sbjct: 190 EYGDMQLIAEAYFL 203

>pdb|2IZ0|A Chain A, Pex Inhibitor-Home Data Length = 474

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 21/196 (10%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG ++A N+   G+ V +Y++ T  ++ + KE  +  L  +      EF+ S+    + +
Sbjct: 16  MGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLE--EFVGSLEKPRRIM 73
Query: 61  LDAYDG--SDGILKHAKP----GVIVIDSSTVDPQVPQTLSNLAR--EKQITFLDAPVSG 112
           L    G  +D  +K   P    G I+ID        P T+   A   +  I F+   VSG
Sbjct: 74  LMVQAGAATDATIKSLLPLLDIGDILIDGGNT--HFPDTMRRNAELADSGINFIGTGVSG 131
Query: 113 GTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN--------IVHCGDSGNGQVAKLCNN 164
           G K A     + M GG K + +   PI + +           + + G +G G   K+ +N
Sbjct: 132 GEKGALLGP-SMMPGGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHN 190
Query: 165 MLLGVTMMGVAEAMNL 180
            +    M  +AE+ +L
Sbjct: 191 GIEYGDMQLIAESYDL 206

>pdb|2IYP|A Chain A, Product Rup Length = 473

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 21/196 (10%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG ++A N+   G+ V +Y++ T  ++ + KE  +  L  +      EF+ S+    + +
Sbjct: 15  MGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLE--EFVGSLEKPRRIM 72
Query: 61  LDAYDG--SDGILKHAKP----GVIVIDSSTVDPQVPQTLSNLAR--EKQITFLDAPVSG 112
           L    G  +D  +K   P    G I+ID        P T+   A   +  I F+   VSG
Sbjct: 73  LMVQAGAATDATIKSLLPLLDIGDILIDGGNT--HFPDTMRRNAELADSGINFIGTGVSG 130
Query: 113 GTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN--------IVHCGDSGNGQVAKLCNN 164
           G K A     + M GG K + +   PI + +           + + G +G G   K+ +N
Sbjct: 131 GEKGALLGP-SMMPGGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHN 189
Query: 165 MLLGVTMMGVAEAMNL 180
            +    M  +AE+ +L
Sbjct: 190 GIEYGDMQLIAESYDL 205

>pdb|2IYO|A Chain A, Structural Characterization Of A Bacterial 6pdh Reveals Aspects Of Specificity, Mechanism And Mode Of Inhibition Length = 472

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 21/196 (10%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG ++A N+   G+ V +Y++ T  ++ + KE  +  L  +      EF+ S+    + +
Sbjct: 14  MGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLE--EFVGSLEKPRRIM 71
Query: 61  LDAYDG--SDGILKHAKP----GVIVIDSSTVDPQVPQTLSNLAR--EKQITFLDAPVSG 112
           L    G  +D  +K   P    G I+ID        P T+   A   +  I F+   VSG
Sbjct: 72  LMVQAGAATDATIKSLLPLLDIGDILIDGGNT--HFPDTMRRNAELADSGINFIGTGVSG 129
Query: 113 GTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN--------IVHCGDSGNGQVAKLCNN 164
           G K A     + M GG K + +   PI + +           + + G +G G   K+ +N
Sbjct: 130 GEKGALLGP-SMMPGGQKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHN 188
Query: 165 MLLGVTMMGVAEAMNL 180
            +    M  +AE+ +L
Sbjct: 189 GIEYGDMQLIAESYDL 204

>pdb|2ZYG|A Chain A, Apo-Form Of Dimeric 6-Phosphogluconate Dehydrogenase Length = 480

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG ++A N+   G+ V V++++ + ++ +  E  N    L    +  EF+ S+    + +
Sbjct: 26  MGRNLALNIESRGYTVSVFNRSREKTEEVIAE--NPGKKLVPYYTVQEFVESLETPRRIL 83
Query: 61  L--DAYDGSDGILKHAKP----GVIVIDSSTVDPQVPQTLSNLAREKQIT-----FLDAP 109
           L   A  G+D  +   KP    G I+ID      Q       + R ++++     F+   
Sbjct: 84  LMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQ-----DTIRRNRELSAEGFNFIGTG 138
Query: 110 VSGGTKAAQEATL---TFMVGGDKSSLEKAKPILKCMGRN-------IVHCGDSGNGQVA 159
           VSGG    +E TL   + M GG K + E   PILK +          + + G  G G   
Sbjct: 139 VSGG----EEGTLKGPSIMPGGQKEAYELVAPILKQIAAVAEDGEPCVTYIGADGAGHYV 194
Query: 160 KLCNNMLLGVTMMGVAEAMNL 180
           K+ +N +    M  +AEA  L
Sbjct: 195 KMVHNGIEYGDMQLIAEAYAL 215

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	183
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	2e-92
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	2e-91
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	2e-88
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	4e-84
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	1e-82
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	2e-81
3qha_A	296	Putative oxidoreductase; seattle structural genomi	3e-81
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	1e-79
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	8e-79
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	2e-78
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	1e-77
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	2e-75
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	3e-72
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	3e-58
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	4e-46
4ezb_A	317	Uncharacterized conserved protein; structural geno	1e-42
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	1e-36
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	1e-19
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	1e-17
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	5e-15
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	9e-14
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	3e-12
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	9e-12
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	6e-11
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	1e-10
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	2e-09
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	4e-09
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	2e-08
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	6e-08
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	3e-06
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	7e-06
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	8e-05
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	1e-04
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	2e-04
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	2e-04
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	3e-04
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	5e-04
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	6e-04
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	6e-04
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	8e-04

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* Length = 296

 Score =  269 bits (691), Expect = 2e-92
 Identities = 87/183 (47%), Positives = 124/183 (67%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA+NL+K+G+ +I+YD   DA +     G  +  S + +A  A+ II+MLP S + 
Sbjct: 11  MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINA 70

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           ++AY G++GILK  K G ++IDSST+DP V + L+    +    F+DAPVSGG  AA+  
Sbjct: 71  IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 130

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            LTFMVGG +     A+ +L CMG N+V+CG  G GQ AK+CNNMLL ++M+G AEAMNL
Sbjct: 131 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 190

Query: 181 GVK 183
           G++
Sbjct: 191 GIR 193

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} Length = 301

 Score =  260 bits (666), Expect = 2e-88
 Identities = 72/183 (39%), Positives = 106/183 (57%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MA NLLK G  V  +D        +  +GA    +   +A+ ++ I + LP +  V
Sbjct: 15  MGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIV 74

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
               +G  G+L   K G +++D S+V P     ++ +A EK I ++DAPVSGGTK A+  
Sbjct: 75  ETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAG 134

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLT MVG  ++  EK +P+L  +G++I H GD+G G   K+ NN+LLG  M  +AEA+ L
Sbjct: 135 TLTIMVGASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVL 194

Query: 181 GVK 183
           GVK
Sbjct: 195 GVK 197

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 Length = 299

 Score =  249 bits (638), Expect = 4e-84
 Identities = 70/183 (38%), Positives = 111/183 (60%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  M++NLLK G+ ++V D+N +A   +   GA  A +   +A   + II+MLP S  V
Sbjct: 16  MGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHV 75

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G +GI++ AKPG ++ID S++ P   + +S+  + K +  LDAPVSGG   A + 
Sbjct: 76  KEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDG 135

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL+ MVGGDK+  +K   ++K M  ++VH GD G G V KL N +++ + +  ++EA+ L
Sbjct: 136 TLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTL 195

Query: 181 GVK 183
             K
Sbjct: 196 ATK 198

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Length = 287

 Score =  245 bits (627), Expect = 1e-82
 Identities = 62/183 (33%), Positives = 94/183 (51%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGS MA+NL+K G  V +++++ + ++ LA  GA  A +   +        +ML      
Sbjct: 12  MGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAA 71

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G  G+L+    G   +D STVDP   Q +      K   FL+APVSG  K A++ 
Sbjct: 72  EEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDG 131

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL  +  GD++  ++A P  + MG+ I+H GD G G   KL  NM++G  M    E + L
Sbjct: 132 TLIILAAGDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLAL 191

Query: 181 GVK 183
           G K
Sbjct: 192 GEK 194

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Length = 287

 Score =  241 bits (618), Expect = 2e-81
 Identities = 60/183 (32%), Positives = 90/183 (49%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MA NL++ G DV V+++N      L   GA  A S + + +  +  I+ML      
Sbjct: 12  MGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAA 71

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G++G+L+    G   ID STVD +    +      +   FL+APVSG  K A++ 
Sbjct: 72  REVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDG 131

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL  +  GD+S    A P    +G+  +H G+ G G   KL  NM++G  M  + E M L
Sbjct: 132 TLIILAAGDQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMAL 191

Query: 181 GVK 183
           G  
Sbjct: 192 GRN 194

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} Length = 296

 Score =  242 bits (619), Expect = 3e-81
 Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 4/183 (2%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA  + +    V VYD   +A   LA+ GA +A S++ +A+     I++L  +  V
Sbjct: 26  MGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDA-QV 84

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +       +  HAKPG ++   ST+       L+   + + I  +DAPVSGG  AA   
Sbjct: 85  REVVGE---LAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARG 141

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            L  MVG D+   E+ KP  K     ++H G+ G G   KL  NML   +     EAM L
Sbjct: 142 ELATMVGADREVYERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKL 201

Query: 181 GVK 183
              
Sbjct: 202 AEA 204

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} Length = 316

 Score =  238 bits (609), Expect = 1e-79
 Identities = 51/183 (27%), Positives = 84/183 (45%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGS +  NLLK GH V V+++  +      +EGA +  + + + S  +   + +   +  
Sbjct: 41  MGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAA 100

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            D   G  G+L+  +PG   +D STVD      L+ +   +   FL+APVSG  + + + 
Sbjct: 101 KDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDG 160

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            L  +  GD+   E      + MG+     G+ GN     L  NM+ G  M  +AE + L
Sbjct: 161 MLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTL 220

Query: 181 GVK 183
              
Sbjct: 221 AQV 223

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} Length = 303

 Score =  235 bits (603), Expect = 8e-79
 Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 2/185 (1%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA-NMALSLSTLASGAEFIISMLPASQD 59
           MG   AR+ L+ G      D N  A   L  EGA   A S    A   + ++ ++  +  
Sbjct: 18  MGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQ 77

Query: 60  VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQE 119
           V     G DG+    KPG  V+ SST+     Q ++       +  LDAPVSGG   A +
Sbjct: 78  VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQ 137

Query: 120 ATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDS-GNGQVAKLCNNMLLGVTMMGVAEAM 178
             +T M  G +++  + KP+L  +  N+    D+ G G   K+ + +L GV +   AEAM
Sbjct: 138 GEMTVMASGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAM 197

Query: 179 NLGVK 183
            L  +
Sbjct: 198 ALAAR 202

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Length = 310

 Score =  235 bits (601), Expect = 2e-78
 Identities = 56/183 (30%), Positives = 88/183 (48%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  M+ NLLKNG  V V+++       L + GA++  S + +    ++ I+ML      
Sbjct: 32  MGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAA 91

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           L       G+L+    G   ID STVD +    ++     K   F++ PVSG  K A++ 
Sbjct: 92  LSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDG 151

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
            L  +  GDK+  E++ P    +G+   + G  GNG   KL  NM++G  M   +E + L
Sbjct: 152 QLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVL 211

Query: 181 GVK 183
             K
Sbjct: 212 ADK 214

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} Length = 295

 Score =  232 bits (595), Expect = 1e-77
 Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 1/183 (0%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MGS MA NL + GH + V       +  L   GA    +   +   A+ I  M+P +  V
Sbjct: 14  MGSPMAINLARAGHQLHVTTI-GPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQV 72

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            D   G  G  K +  G  ++D S++ P   +  +    E    +LDAPVSGG   A+E 
Sbjct: 73  EDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDAPVSGGEIGAREG 132

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL+ MVGG++   ++ KP+   +G+NI   G +G+GQ  K+ N +++ + +  V+EA+  
Sbjct: 133 TLSIMVGGEQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVF 192

Query: 181 GVK 183
             K
Sbjct: 193 ASK 195

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* Length = 289

 Score =  226 bits (579), Expect = 2e-75
 Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 6/183 (3%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MA +L +    ++       A +   + G+          + A  I + LP +++V
Sbjct: 12  MGYPMAGHLARRFPTLVWNRTFEKALRHQEEFGS--EAVPLERVAEARVIFTCLPTTREV 69

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +  +    +  + + G   +D+++ +P+  + L+   REK +T+LDAPVSGGT  A+  
Sbjct: 70  YEVAEA---LYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAG 126

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TLT M+GG + ++E+ +P L    + +VH G  G G   K  NN LL V +    E +  
Sbjct: 127 TLTVMLGGPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLA 185

Query: 181 GVK 183
            VK
Sbjct: 186 LVK 188

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Length = 320

 Score =  219 bits (561), Expect = 3e-72
 Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 2/183 (1%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MAR L + G+ + V+++    + +LA  GA +       A  A+ ++SML     V
Sbjct: 42  MGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVV 101

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            D      G+    KPG + +D +++ P+  +  +       I  LD PVSGGT  A++ 
Sbjct: 102 QDVLFA-QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQG 160

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
           TL  M GG  +  E++ P+LK  GR   H G  G+GQ+ KL N M++G+T+  VAEA+  
Sbjct: 161 TLVIMAGGKPADFERSLPLLKVFGR-ATHVGPHGSGQLTKLANQMIVGITIGAVAEALLF 219

Query: 181 GVK 183
             K
Sbjct: 220 ATK 222

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} Length = 306

 Score =  183 bits (467), Expect = 3e-58
 Identities = 32/183 (17%), Positives = 69/183 (37%), Gaps = 3/183 (1%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA+ LLK G  V +++++   +  L   GA++  S+    S +   I +L  +   
Sbjct: 20  MGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHAT 79

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G  G+   A     ++D +T        L  L  +    ++   +    +     
Sbjct: 80  HEVL-GMPGVA-RALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHR 137

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL 180
               +  GD+ + E+ + +L+ +  + V               +      M+   EA+  
Sbjct: 138 ESHSIHTGDREAFEQHRALLEGLAGHTVFLPW-DEALAFATVLHAHAFAAMVTFFEAVGA 196

Query: 181 GVK 183
           G +
Sbjct: 197 GDR 199

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} Length = 312

 Score =  152 bits (386), Expect = 4e-46
 Identities = 34/189 (17%), Positives = 65/189 (34%), Gaps = 13/189 (6%)

Query: 1   MGSHMARNLLKNGH-DVIVYDKNTDAS--QTLAKEGANMALSLSTLASGAEFIISMLPAS 57
             S +A  L + G  D+  YD  +  S      + G +   S++ +A   + I S++ A 
Sbjct: 35  AASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQ 94

Query: 58  QDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQI--TFLDAPVSGGTK 115
             +  A         H   G +  D ++  P V + + ++    +    +    V    K
Sbjct: 95  AALEVA----QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVK 150

Query: 116 AAQEATLTFMVGGDKSSLEKAKPILKCMGRNI-VHCGDSGNGQVAKLCNNMLLGVTMMGV 174
                    + G       + +      G  I V  G+ G   + K+C + +L       
Sbjct: 151 PHGHRVPLVVDGDGA---RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALF 207

Query: 175 AEAMNLGVK 183
            EA+    K
Sbjct: 208 LEALAAAEK 216

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Length = 317

 Score =  143 bits (363), Expect = 1e-42
 Identities = 27/191 (14%), Positives = 61/191 (31%), Gaps = 15/191 (7%)

Query: 1   MGSHMARNLLKNG-HDVIVYDKNT------DASQTLAKEGANMALSLSTLASGAEFIISM 53
               +A  L       +  YD          A +  A E     L      + A+ ++S+
Sbjct: 35  AAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGVEPLDDVAGIACADVVLSL 94

Query: 54  LPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGG 113
           +  +         +     H     + ID ++V P      +      + +F++  V   
Sbjct: 95  VVGAATK----AVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMAR 150

Query: 114 TKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDS-GNGQVAKLCNNMLLGVTMM 172
                E     + G       +    L  +G N+   G++ G     K+  ++++     
Sbjct: 151 VPPYAEKVPILVAGRRA---VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEA 207

Query: 173 GVAEAMNLGVK 183
            + EA++   +
Sbjct: 208 LLIEALSSAER 218

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 Length = 264

 Score =  127 bits (319), Expect = 1e-36
 Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 13/184 (7%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           +   +A  L   G +V+   +    S         +  +          +IS +     +
Sbjct: 11  VAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVAL 70

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             A               I +D + + P+  +  S+L  +    F+DA + G  +     
Sbjct: 71  GAARRAGRH------VRGIYVDINNISPETVRMASSLIEKGG--FVDAAIMGSVRRKGAD 122

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDS-GNGQVAKLCNNMLLGVTMMGVAEAMN 179
                 G D     K    L   G NI   G   G+    K+  +         + E + 
Sbjct: 123 IRIIASGRDAEEFMK----LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLT 178

Query: 180 LGVK 183
              +
Sbjct: 179 AAHR 182

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Length = 358

 Score = 83.9 bits (208), Expect = 1e-19
 Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 48/213 (22%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAE---FIISMLPAS 57
           MG+ M R L K GH+ +VYD N +A Q L +EG   A S+    +       +  M+PA+
Sbjct: 33  MGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA 92

Query: 58  --QDVLDAYDGSDGILKHAKPGVIVID---SSTVDPQVPQTL--SNLAREKQITFLDAPV 110
               +L        +        IVID   S   D      +  ++  R + IT++D   
Sbjct: 93  VVDSMLQR------MTPLLAANDIVIDGGNSHYQD-----DIRRADQMRAQGITYVDVGT 141

Query: 111 SGGTKAAQEATLTFMVGGDKSSLEKAKPILK-----------CMGRNI---------VHC 150
           SGG    +      M+GG+K ++E+  P+ +             GR           +HC
Sbjct: 142 SGGIFGLERGY-CLMIGGEKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHC 200

Query: 151 GDSGNGQVAKLCNNMLLGV---TMMGVAEAMNL 180
           G SG G   K+ +N   G+    M   AE +N+
Sbjct: 201 GPSGAGHFVKMVHN---GIEYGLMAAYAEGLNI 230

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} Length = 286

 Score = 77.0 bits (189), Expect = 1e-17
 Identities = 29/202 (14%), Positives = 55/202 (27%), Gaps = 28/202 (13%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ + R +  + H +   +   +    L   G             A+ ++  LP     
Sbjct: 23  MGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-LTDGDGWIDEADVVVLALP----D 77

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPV---------- 110
                 ++ I+   +PG IV+      P          R     F+  P           
Sbjct: 78  NIIEKVAEDIVPRVRPGTIVLILDAAAPYAGVM---PERADITYFIGHPCHPPLFNDETD 134

Query: 111 ------SGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNN 164
                   G  A Q      M  G +        I + M   +         Q+A L   
Sbjct: 135 PAARTDYHGGIAKQAIVCALM-QGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPG 193

Query: 165 M---LLGVTMMGVAEAMNLGVK 183
           +   +    +  +  A++    
Sbjct: 194 LSEMVAMPFVETMVHAVDECAD 215

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} Length = 266

 Score = 69.8 bits (170), Expect = 5e-15
 Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 13/187 (6%)

Query: 1   MGSHMARNLLKNGHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLP--A 56
           + +++A+ L + G  ++ VY +  ++++ LA++  A     L+ +   A+  I  L   A
Sbjct: 21  LATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA 80

Query: 57  SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKA 116
             ++L       GI++  +   +++ ++   P              + +     S   + 
Sbjct: 81  FAELL------QGIVEGKREEALMVHTAGSIPM--NVWEGHVPHYGVFYPMQTFSKQREV 132

Query: 117 AQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAE 176
             +    F+           K I   +  N V+  DS   +   L        T    A 
Sbjct: 133 DFKEIPFFIEASSTEDAAFLKAIASTLS-NRVYDADSEQRKSLHLAAVFTCNFTNHMYAL 191

Query: 177 AMNLGVK 183
           A  L  K
Sbjct: 192 AAELLKK 198

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 Length = 478

 Score = 67.3 bits (165), Expect = 9e-14
 Identities = 31/152 (20%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA--SGAEF--------- 49
           MG+++A N+ + G  V V+++    S+   K  A+   + +  A  +   F         
Sbjct: 12  MGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRK 71

Query: 50  IISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAP 109
            + ++ A     D+    + + K  + G I++D+     +     +       + FL   
Sbjct: 72  ALILVQAGAAT-DST--IEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMG 128

Query: 110 VSGGTKAAQEATLTFMVGGDKSSLEKAKPILK 141
           +SGG + A++    F  GG  S  E+ +PI++
Sbjct: 129 ISGGEEGARKGP-AFFPGGTLSVWEEIRPIVE 159

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Length = 215

 Score = 61.9 bits (150), Expect = 3e-12
 Identities = 25/166 (15%), Positives = 44/166 (26%), Gaps = 16/166 (9%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
               +A  L+ +G  V+V  +N   +  L    A          S  E I   +      
Sbjct: 39  FARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQ-VTFQEEAVSSPEVIFVAVF----- 92

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            + Y     +       ++V  S+  + +  Q   + A      F    V          
Sbjct: 93  REHYSSLCSLSDQLAGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNVISAW 152

Query: 121 TL----------TFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNG 156
           TL            + G    +      +   MG   V  G   + 
Sbjct: 153 TLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFMPVDMGSLASA 198

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6 Length = 276

 Score = 61.0 bits (147), Expect = 9e-12
 Identities = 21/185 (11%), Positives = 51/185 (27%), Gaps = 13/185 (7%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           +       L        +  ++ D ++ LA+     A +L         +  ++P     
Sbjct: 13  LTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRYIK 72

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             A               +++  S     +   +   +    I    +  S       + 
Sbjct: 73  TVAN-------HLNLGDAVLVHCSGF---LSSEIFKKSGRASIHPNFSFSSLEKALEMKD 122

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSG---NGQVAKLCNNMLLGVTMMGVAEA 177
            + F + GD+  L   K I + +                  A + +N  + +  +     
Sbjct: 123 QIVFGLEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASNFPVALAYLSKRIY 182

Query: 178 MNLGV 182
             LG+
Sbjct: 183 TLLGL 187

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* Length = 480

 Score = 59.1 bits (144), Expect = 6e-11
 Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 17/151 (11%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMAL----SLSTLASGAE---FIISM 53
           MG ++A N+   G+ V +++++ + ++ +  E     L    ++       E    I+ M
Sbjct: 26  MGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLM 85

Query: 54  LPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGG 113
           + A     DA    D +  +   G I+ID      Q     +     +   F+   VSGG
Sbjct: 86  VKAGAGT-DAA--IDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGG 142

Query: 114 TKAAQEATLT---FMVGGDKSSLEKAKPILK 141
            + A    L     M GG K + E   PIL 
Sbjct: 143 EEGA----LKGPSIMPGGQKEAYELVAPILT 169

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* Length = 474

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 11/148 (7%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMAL----SLSTLASGAE---FIISM 53
           MG ++A N+   G+ V +Y++ T  ++ + KE  +  L    +L       E    I+ M
Sbjct: 16  MGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLM 75

Query: 54  LPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGG 113
           + A     DA      +L     G I+ID            +    +  I F+   VSGG
Sbjct: 76  VQAGAAT-DAT--IKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGG 132

Query: 114 TKAAQEATLTFMVGGDKSSLEKAKPILK 141
            K A     + M GG K + +   PI +
Sbjct: 133 EKGALLGP-SMMPGGQKEAYDLVAPIFE 159

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* Length = 482

 Score = 54.9 bits (133), Expect = 2e-09
 Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 12/149 (8%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMAL----SLSTLASGAE---FIIS 52
           MG ++  N+  +G  V  +++        LA E     +    SL  + S  +    II 
Sbjct: 13  MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIIL 72

Query: 53  MLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG 112
           ++ A Q V D +   + ++     G I+ID    + +         ++K I F+ + VSG
Sbjct: 73  LVKAGQAV-DNF--IEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSG 129

Query: 113 GTKAAQEATLTFMVGGDKSSLEKAKPILK 141
           G   A+    + M GG+K +    K I +
Sbjct: 130 GEDGARYGP-SLMPGGNKEAWPHIKAIFQ 157

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} Length = 497

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 12/149 (8%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMAL----SLSTLASGAE---FIIS 52
           MG ++  N   +G  V  Y++        LA E    ++    S+    S  +    ++ 
Sbjct: 21  MGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVML 80

Query: 53  MLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG 112
           ++ A   V DA    + I+   + G I+ID                ++K I F+ + VSG
Sbjct: 81  LVKAGAPV-DAL--INQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSG 137

Query: 113 GTKAAQEATLTFMVGGDKSSLEKAKPILK 141
           G + A+    + M GG + +    K I +
Sbjct: 138 GEEGARYGP-SLMPGGSEEAWPHIKNIFQ 165

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Length = 201

 Score = 50.8 bits (121), Expect = 2e-08
 Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 19/166 (11%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
            G  +   +L+ G+ V+   +N   S  L   GA +       +     ++++     D 
Sbjct: 30  FGKSLGLKMLQCGYSVVFGSRNPQVSSLLP-RGAEVLCYSEAASRSDVIVLAVHREHYDF 88

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
           L         L  +  G ++ID S          SN     Q+    A V          
Sbjct: 89  LAE-------LADSLKGRVLIDVSNNQKMNQYPESNAEYLAQL-VPGAHVVKAFNTISAW 140

Query: 121 TL----------TFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNG 156
            L           F+ G D  + ++   I + +G   +  G     
Sbjct: 141 ALQSGTLDASRQVFVCGNDSKAKDRVMDIARTLGLTPLDQGSLVAA 186

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} Length = 209

 Score = 49.8 bits (118), Expect = 6e-08
 Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 7/153 (4%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  +  N    GH+V  Y     A+           + ++        +          
Sbjct: 30  MGQAIGHNFEIAGHEVTYYGSKDQATT------LGEIVIMAVPYPALAALAKQYATQLKG 83

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
               D ++ +       ++V   S+   ++ Q L +    K      A      +   + 
Sbjct: 84  KIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPDSQVLKAFNTTFAATLQSGQVNGKE 143

Query: 121 TLTFMV-GGDKSSLEKAKPILKCMGRNIVHCGD 152
             T +V G D S+ ++    L      +   G 
Sbjct: 144 PTTVLVAGNDDSAKQRFTRALADSPLEVKDAGK 176

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 45.7 bits (107), Expect = 3e-06
 Identities = 22/174 (12%), Positives = 50/174 (28%), Gaps = 28/174 (16%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM---------ALSLSTLASGAEFII 51
           +       L  +G  V V  +  ++++ L+    +            +L    +  + +I
Sbjct: 14  VTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVI 73

Query: 52  SMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFL----D 107
           S++P +            ++K A      + +++        L   A++  IT +     
Sbjct: 74  SLIPYTFHA--------TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGITVMNEIGL 125

Query: 108 APVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKL 161
            P      A +        GG   +              +     S N    K 
Sbjct: 126 DPGIDHLYAIKTIEEVHAAGGKIKTFL-------SYCGGLPAPESSDNPLGYKF 172

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 41.3 bits (97), Expect = 8e-05
 Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 27/114 (23%)

Query: 2   GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQ--- 58
           G   A +L K  ++V + D        L +   +  L L +L   A     +        
Sbjct: 24  GWATALHLSKKNYEVCIVDN-------LVRRLFDHQLGLESLTPIASIHDRISRWKALTG 76

Query: 59  --------DVLDAYDGSDGILKHAKPGVIV-------IDSSTVDPQVP-QTLSN 96
                   D+ D ++      K  +P  +V          S +D      T  N
Sbjct: 77  KSIELYVGDICD-FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHN 129

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} Length = 467

 Score = 40.6 bits (94), Expect = 1e-04
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 23/148 (15%)

Query: 1   MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKEGANMALS--------LSTLASGAEFII 51
           +   +   L  N   +V V  +    +Q LAK   + A+S        L  + +  + +I
Sbjct: 34  VAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVI 93

Query: 52  SMLPASQDVLDAYDGSDGILKHA-KPGVIVIDSSTVDPQVPQTLSNLAREKQITFL---- 106
           S++P +            ++K A +    V+ SS + P   + L     +  IT +    
Sbjct: 94  SLIPYTFHP--------NVVKSAIRTKTDVVTSSYISPA-LRELEPEIVKAGITVMNEIG 144

Query: 107 DAPVSGGTKAAQEATLTFMVGGDKSSLE 134
             P      A +        GG   S  
Sbjct: 145 LDPGIDHLYAVKTIDEVHRAGGKLKSFL 172

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 10/91 (10%), Positives = 30/91 (32%), Gaps = 23/91 (25%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVL 61
          G ++  ++  +G+  I+  +                   +   +  E+ +S     +D++
Sbjct: 15 GQYVVESIKNDGNTPIILTR----------------SIGNKAINDYEYRVSDY-TLEDLI 57

Query: 62 DAYDGSDGILKH--AKPGVIVIDSSTVDPQV 90
          +  +  D ++ H  A  G         +   
Sbjct: 58 NQLNDVDAVV-HLAATRGS---QGKISEFHD 84

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 30/84 (35%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLST-----LASGAEFIISMLPA 56
          GSH+  +LL  G +V V D                  +L+T     +  G  F       
Sbjct: 13 GSHIVEDLLARGLEVAVLD------------------NLATGKRENVPKGVPFFR----- 49

Query: 57 SQDVLDAYDGSDGILKHAKPGVIV 80
            D+ D  +G +   +  +P  + 
Sbjct: 50 -VDLRDK-EGVERAFREFRPTHVS 71

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A Length = 259

 Score = 39.0 bits (92), Expect = 3e-04
 Identities = 11/52 (21%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 1  MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFII 51
          M S + + L +  H++I+   + + S+ +A++     A+S   L    + +I
Sbjct: 14 MASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVI 65

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 Length = 298

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 21/155 (13%), Positives = 51/155 (32%), Gaps = 28/155 (18%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLP--ASQ 58
           +G   AR L  +G+ + + D+       +A+           + + A+ +I  +P   + 
Sbjct: 33  LGGLFARYLRASGYPISILDRED---WAVAES----------ILANADVVIVSVPINLTL 79

Query: 59  DVLDAYDGSDGILKHAKPGVIVID-SSTVDPQVPQTLSNLAREKQITFLDA-PVSGGTKA 116
           + ++       +  +    +++ D +S     + + L           L   P+ G   A
Sbjct: 80  ETIER------LKPYLTENMLLADLTSVKREPLAKMLEVHTGA----VLGLHPMFGADIA 129

Query: 117 AQEA-TLTFMVGGDKSSLEKAKPILKCMGRNIVHC 150
           +     +    G      E     ++  G  I   
Sbjct: 130 SMAKQVVVRCDGRFPERYEWLLEQIQIWGAKIYQT 164

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 38.3 bits (90), Expect = 6e-04
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query: 2  GSHMARNLLKNGHDVIVYD 20
          GS++  + L  GH+++V D
Sbjct: 33 GSNLIEHWLPQGHEILVID 51

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 Length = 279

 Score = 38.3 bits (90), Expect = 6e-04
 Identities = 17/85 (20%), Positives = 32/85 (37%), Gaps = 9/85 (10%)

Query: 1  MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA-NMALSLSTLASGAEFIISMLP--AS 57
          +G+ +A +L + GH +I   +     +   +    + A    +L   A+ I    P    
Sbjct: 11 IGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQLI 70

Query: 58 QDVLDAYDGSDGILKHAKPGVIVID 82
             L+       ++ H  P  IV D
Sbjct: 71 LPTLEK------LIPHLSPTAIVTD 89

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 37.9 bits (89), Expect = 8e-04
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query: 2  GSHMARNLLKNGHDVIVYD 20
          GSH+   L++ G++V+V D
Sbjct: 13 GSHLVDKLVELGYEVVVVD 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	183
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	100.0
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	100.0
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	100.0
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	100.0
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	100.0
3qha_A	296	Putative oxidoreductase; seattle structural genomi	100.0
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	100.0
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	100.0
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	100.0
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	100.0
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	99.98
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	99.97
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	99.97
4ezb_A	317	Uncharacterized conserved protein; structural geno	99.97
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	99.96
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	99.96
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	99.95
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	99.95
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	99.95
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	99.95
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	99.95
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	99.94
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	99.94
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	99.94
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	99.93
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	99.93
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	99.93
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	99.92
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	99.91
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	99.91
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	99.91
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	99.9
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	99.9
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	99.88
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	99.87
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	99.86
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	99.85
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	99.85
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	99.83
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	99.82
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	99.82
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	99.81
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	99.81
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	99.8
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	99.78
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	99.77
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	99.75
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	99.75
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	99.74
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	99.74
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	99.74
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	99.72
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	99.72
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	99.72
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	99.72
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	99.71
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	99.71
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	99.7
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	99.69
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	99.69
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	99.69
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	99.69
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	99.69
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	99.69
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	99.68
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	99.68
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	99.67
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	99.67
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	99.49
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	99.65
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	99.65
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	99.63
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	99.62
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	99.6
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	99.59
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	99.59
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	99.57
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	99.52
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	99.46
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	99.36
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	99.34
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	99.33
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	99.27
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	99.26
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	99.26
4fgw_A	391	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi	99.26
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	99.25
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	99.24
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	99.23
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	99.21
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	99.21
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	99.19
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	99.19
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	99.17
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	99.16
1ygy_A	529	PGDH, D-3-phosphoglycerate dehydrogenase; oxidored	99.16
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	99.15
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	99.15
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	99.14
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	99.14
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	99.12
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	99.12
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	99.12
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	99.11
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	99.11
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	99.1
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	99.1
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	99.08
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	99.07
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	99.05
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	99.05
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	99.04
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	99.03
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	99.02
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	98.99
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	98.99
3oet_A	381	Erythronate-4-phosphate dehydrogenase; structural	98.96
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	98.95
1sc6_A	404	PGDH, D-3-phosphoglycerate dehydrogenase; alloster	98.94
3fr7_A	525	Putative ketol-acid reductoisomerase (OS05G057370	98.9
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	98.89
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	98.85
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	98.84
2o4c_A	380	Erythronate-4-phosphate dehydrogenase; erythronate	98.82
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	98.81
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	98.8
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	98.77
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	98.76
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	98.74
3c7a_A	404	Octopine dehydrogenase; L) stereospecific opine de	98.66
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.65
2duw_A	145	Putative COA-binding protein; ligand binding prote	98.58
3kb6_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	98.57
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	98.51
2b0j_A	358	5,10-methenyltetrahydromethanopterin hydrogenase;	98.51
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.51
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.48
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.47
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.42
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.41
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	98.34
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	98.34
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	98.29
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.29
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	98.26
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.24
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.24
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	98.24
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	98.23
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	98.23
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.22
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	98.22
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	98.19
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.14
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	98.13
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	98.1
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	98.09
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	98.06
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	98.06
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.05
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	98.04
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.04
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	98.03
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	98.03
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	98.01
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	97.98
1tlt_A	319	Putative oxidoreductase (virulence factor MVIM HO;	97.96
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.96
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.95
3c1a_A	315	Putative oxidoreductase; ZP_00056571.1, oxidoreduc	97.94
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	97.94
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	97.94
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	97.94
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	97.92
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.91
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.89
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.88
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	97.87
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.87
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.86
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.85
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	97.85
2p2s_A	336	Putative oxidoreductase; YP_050235.1, structural g	97.84
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.84
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	97.83
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.83
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.82
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.81
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	97.79
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.78
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.78
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.77
3ulk_A	491	Ketol-acid reductoisomerase; branched-chain amino	97.76
3mz0_A	344	Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd;	97.73
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.73
1ydw_A	362	AX110P-like protein; structural genomics, protein	97.72
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	97.65
3bio_A	304	Oxidoreductase, GFO/IDH/MOCA family; structural ge	97.64
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.64
4gmf_A	372	Yersiniabactin biosynthetic protein YBTU; rossmann	97.62
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.61
3ec7_A	357	Putative dehydrogenase; alpha-beta, structural gen	97.6
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.6
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	97.6
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	97.56
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.55
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.54
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.52
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.5
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.5
1h6d_A	433	Precursor form of glucose-fructose oxidoreductase;	97.47
3dty_A	398	Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram	97.44
2nvw_A	479	Galactose/lactose metabolism regulatory protein GA	97.44
3m2t_A	359	Probable dehydrogenase; PSI, SGXNY, structural gen	97.44
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.43
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.42
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.42
3btv_A	438	Galactose/lactose metabolism regulatory protein GA	97.39
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	97.39
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.35
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.34
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.34
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.34
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.32
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	97.31
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.3
3moi_A	387	Probable dehydrogenase; structural genomics, PSI2,	97.29
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.28
3f4l_A	345	Putative oxidoreductase YHHX; structural genomics,	97.25
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	97.22
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.21
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.18
2ixa_A	444	Alpha-N-acetylgalactosaminidase; NAD, A-ECO conver	97.12
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.1
3kux_A	352	Putative oxidoreductase; oxidoreductase family, cs	97.1
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	97.07
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	97.06
3upl_A	446	Oxidoreductase; rossmann fold, NADPH binding; 1.50	97.04
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.02
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.97
3u3x_A	361	Oxidoreductase; structural genomics, PSI-biology,	96.96
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.94
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.91
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.9
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.9
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.89
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.88
1f06_A	320	MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH	96.88
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.85
2nu8_A	288	Succinyl-COA ligase [ADP-forming] subunit alpha; c	96.84
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.83
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	96.83
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.81
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	96.8
4had_A	350	Probable oxidoreductase protein; structural genomi	96.79
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.79
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.78
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.78
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.76
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	96.76
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.72
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.71
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	96.67
2yv1_A	294	Succinyl-COA ligase [ADP-forming] subunit alpha; C	96.67
3oqb_A	383	Oxidoreductase; structural genomics, protein struc	96.67
3gdo_A	358	Uncharacterized oxidoreductase YVAA; structural ge	96.66
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.57
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	96.57
1oi7_A	288	Succinyl-COA synthetase alpha chain; SCS, ligase,	96.5
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	96.49
3i23_A	349	Oxidoreductase, GFO/IDH/MOCA family; structural ge	96.47
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.45
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	96.43
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.43
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.38
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	96.37
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	96.36
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.36
3fhl_A	362	Putative oxidoreductase; NAD-binding domain, PSI-2	96.35
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.34
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.33
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.3
2yv2_A	297	Succinyl-COA synthetase alpha chain; COA-binding d	96.27
3ff4_A	122	Uncharacterized protein; structural genomics, PSI-	96.27
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.18
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.17
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.17
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.16
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.14
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.07
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	96.06
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.04
4b4u_A	303	Bifunctional protein fold; oxidoreductase; HET: NA	96.04
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.03
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	95.95
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.92
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	95.87
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	95.8
2fp4_A	305	Succinyl-COA ligase [GDP-forming] alpha-chain, mit	95.77
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	95.68
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	95.68
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	95.67
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	95.66
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	95.64
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	95.61
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	95.58
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	95.55
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	95.52
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	95.51
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	95.43
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.39
1lnq_A	336	MTHK channels, potassium channel related protein;	95.38
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	95.35
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.34
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	95.32
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	95.31
3imf_A	257	Short chain dehydrogenase; structural genomics, in	95.27
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	95.26
3ip3_A	337	Oxidoreductase, putative; structural genomics, PSI	95.25
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	95.25
3fni_A	159	Putative diflavin flavoprotein A 3; alpha-beta pro	95.23
4ew6_A	330	D-galactose-1-dehydrogenase protein; nysgrc, PSI-b	95.21
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	95.2
2czc_A	334	Glyceraldehyde-3-phosphate dehydrogenase; glycolys	95.2
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	95.19
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.11
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	95.09
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	95.06
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	95.03
1cf2_P	337	Protein (glyceraldehyde-3-phosphate dehydrogenase)	95.03
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	95.02
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.02
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	95.0
4h3v_A	390	Oxidoreductase domain protein; structural genomics	94.99
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	94.98
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	94.96
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	94.92
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	94.91
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	94.89
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	94.86
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	94.84
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	94.82
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	94.81
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	94.79
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	94.79
3mtj_A	444	Homoserine dehydrogenase; rossmann-fold, PSI, MCSG	94.78
4dqx_A	277	Probable oxidoreductase protein; structural genomi	94.77
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	94.75
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	94.72
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	94.72
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	94.7
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	94.69
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	94.69
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	94.69
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	94.68
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	94.68
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	94.68
5nul_A	138	Flavodoxin; electron transport, flavoprotein, FMN;	94.67
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	94.67
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	94.66
3cxt_A	291	Dehydrogenase with different specificities; rossma	94.64
1vkn_A	351	N-acetyl-gamma-glutamyl-phosphate reductase; TM178	94.64
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	94.63
1lc0_A	294	Biliverdin reductase A; oxidoreductase, tetrapyrro	94.63
4hv4_A	494	UDP-N-acetylmuramate--L-alanine ligase; MURC, yers	94.6
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	94.58
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	94.57
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	94.54
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	94.53
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	94.53
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	94.51
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	94.5
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	94.49
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	94.49
2qrj_A	394	Saccharopine dehydrogenase, NAD+, L-lysine- formin	94.47
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	94.47
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	94.44
3rih_A	293	Short chain dehydrogenase or reductase; structural	94.39
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	94.38
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	94.38
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	94.36
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	94.36
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	94.34
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	94.28
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	94.28
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	94.28
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	94.26
2vt3_A	215	REX, redox-sensing transcriptional repressor REX;	94.21
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	94.17
1xkq_A	280	Short-chain reductase family member (5D234); parra	94.17
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	94.16
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	94.14
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	94.11
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	94.1
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	94.09
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	94.09
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	94.09
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	94.08
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	94.08
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	94.07
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	94.07
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	94.04
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	94.04
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	94.03
2fz5_A	137	Flavodoxin; alpha/beta doubly-wound topology, non-	94.01
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	94.01
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	93.99
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	93.99
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	93.98
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	93.96
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	93.95
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	93.95
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	93.93
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	93.93
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	93.93
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	93.92
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	93.88
1xhl_A	297	Short-chain dehydrogenase/reductase family member	93.88
1b7g_O	340	Protein (glyceraldehyde 3-phosphate dehydrogenase;	93.87
3hly_A	161	Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein	93.86
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	93.81
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	93.79
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	93.78
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	93.75
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	93.73
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	93.72
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	93.71
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	93.7
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	93.67
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	93.64
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	93.62
2g0t_A	350	Conserved hypothetical protein; structural genomic	93.61
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	93.61
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	93.6
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	93.56
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	93.55
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	93.54
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	93.53
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	93.52
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	93.52
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	93.52
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	93.52
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	93.48
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	93.46
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	93.46
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	93.41
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	93.36
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	93.33
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	93.33
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	93.28
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	93.22
1xq1_A	266	Putative tropinone reducatse; structural genomics,	93.22
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	93.22
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	93.21
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	93.19
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	93.18
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	93.17
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	93.15
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	93.14
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	93.13
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	93.11
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	93.1
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	93.1
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	93.08
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	93.06
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	93.04
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	93.02
2a9f_A	398	Putative malic enzyme ((S)-malate:NAD+ oxidoreduct	93.02
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	93.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	93.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	92.98
1xq6_A	253	Unknown protein; structural genomics, protein stru	92.96
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	92.95
1spx_A	278	Short-chain reductase family member (5L265); paral	92.94
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	92.94
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	92.9
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	92.87
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	92.84
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	92.83
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	92.81
2dvm_A	439	Malic enzyme, 439AA long hypothetical malate oxido	92.8
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	92.79
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	92.77
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	92.77
3kr9_A	225	SAM-dependent methyltransferase; class I rossmann-	92.75
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	92.73
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	92.67
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	92.66
3do5_A	327	HOM, homoserine dehydrogenase; NP_069768.1, putati	92.63
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	92.61
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	92.6
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	92.6
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	92.59
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	92.57
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	92.53
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	92.47
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	92.42
1j5p_A	253	Aspartate dehydrogenase; TM1643, structural genomi	92.39
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	92.34
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	92.32

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=100.00  E-value=6.1e-40  Score=252.32  Aligned_cols=183  Identities=51%  Similarity=0.788  Sum_probs=177.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||++|.++||+|++|||++++.+.+.+.|...++++.|++++||+||+|+|++.+++.++++..++.+.+++|++|
T Consensus        14 MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~ii   93 (300)
T 3obb_A           14 MGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLV   93 (300)
T ss_dssp             THHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEE
T ss_pred             HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEE
Confidence            89999999999999999999999999999999999999999999999999999999999999998877899999999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      ||+||..|.+.+.+.+.+.++|++|+|+|++|++..+..|+++++++|+++++++++++|+.+|.+++++|+.|+|+.+|
T Consensus        94 Id~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~K  173 (300)
T 3obb_A           94 LECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNIFHAGPDGAGQVAK  173 (300)
T ss_dssp             EECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHHHHHHhCCCEEEeCCccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|.+.+.++++++|++.+++|
T Consensus       174 l~~N~l~~~~~~a~aEa~~la~~  196 (300)
T 3obb_A          174 VCNNQLLAVLMIGTAEAMALGVA  196 (300)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999874

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=100.00  E-value=2e-36  Score=232.64  Aligned_cols=181  Identities=19%  Similarity=0.380  Sum_probs=165.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||++|+++||+|++|||++++.+.+.+.|...++++.|+++.+|+||+++|++..++.++.  ..+.+.+.+++++
T Consensus        16 MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~--~~~~~~~~~~~ii   93 (297)
T 4gbj_A           16 LGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFS--MELVEKLGKDGVH   93 (297)
T ss_dssp             THHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSC--HHHHHHHCTTCEE
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHH--HHHHhhcCCCeEE
Confidence            89999999999999999999999999999888999999999999999999999999998888774  4577889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeC-CcchHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCG-DSGNGQVA  159 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g-~~g~a~~~  159 (183)
                      ||+||..|.+.+.+.+.+.++|++|+++|+++++..+..++.+++++|+++.+++++++|+.+|.+++++| +.|+|+++
T Consensus        94 id~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~  173 (297)
T 4gbj_A           94 VSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVENFVKGVFDFGDDPGAANVI  173 (297)
T ss_dssp             EECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCSEEEECCSCTTHHHHH
T ss_pred             EECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeecccchhHHHHHHHHHHHhhCCeEEecCCccHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998 48999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccC
Q psy755          160 KLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       160 k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      |+++|.+.++++++++|++.+++|
T Consensus       174 Kl~~N~~~~~~~~~~aEa~~la~~  197 (297)
T 4gbj_A          174 KLAGNFMIACSLEMMGEAFTMAEK  197 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999864

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=100.00  E-value=7.6e-33  Score=214.17  Aligned_cols=183  Identities=31%  Similarity=0.479  Sum_probs=174.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.++|.+|++.||+|++|||++++.+.+.+.|+...+++.+++++||+||+++|.+..++.++++.+++.+.++++++|
T Consensus        32 mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~v  111 (310)
T 3doj_A           32 MGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGY  111 (310)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEE
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEE
Confidence            79999999999999999999999999999988988888999999999999999999888999988777888899999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+|+..|.+.+.+.+.+.+.|.+|+++|+++++..+..++.+++++++++.++.++++|+.+|.+++++++.|.++++|
T Consensus       112 v~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~K  191 (310)
T 3doj_A          112 IDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMK  191 (310)
T ss_dssp             EECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhCCCEEEeCCcCHHHHHH
Confidence            99999999999999999999999999999999999999999899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|.+.+.++++++|++.++++
T Consensus       192 l~~N~~~~~~~~~~~Ea~~l~~~  214 (310)
T 3doj_A          192 LIVNMIMGSMMNAFSEGLVLADK  214 (310)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998863

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=100.00  E-value=1.5e-32  Score=210.38  Aligned_cols=183  Identities=33%  Similarity=0.530  Sum_probs=173.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.++|.+|++.||+|++|||++++.+.+.+.|+...+++.+++++||+||+++|++..++.++++.+++.+.++++++|
T Consensus        12 mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~v   91 (287)
T 3pdu_A           12 MGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGY   91 (287)
T ss_dssp             THHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEE
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEE
Confidence            89999999999999999999999999999988988888999999999999999999888999987777888889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+|+..|.+.+.+.+.+.++|.+|+++|+++++..+..++.+++++++++.++.++++|+.+|.+++++++.|+++++|
T Consensus        92 v~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~K  171 (287)
T 3pdu_A           92 IDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAFAALGKKCLHLGEVGQGARMK  171 (287)
T ss_dssp             EECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEEEEECSSTTHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCEEEcCCCChHHHHH
Confidence            99999999999999999988999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|.+.+.++++++|++.++++
T Consensus       172 l~~N~~~~~~~~~~~Ea~~l~~~  194 (287)
T 3pdu_A          172 LVVNMIMGQMMTALGEGMALGRN  194 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998763

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=100.00  E-value=1.8e-32  Score=210.01  Aligned_cols=183  Identities=34%  Similarity=0.528  Sum_probs=173.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.++|.+|+++|++|++|||++++.+.+.+.|+...+++.++++++|+||+++|++..++.++++.+++.+.++++++|
T Consensus        12 mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~v   91 (287)
T 3pef_A           12 MGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGY   91 (287)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEE
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEE
Confidence            79999999999999999999999999999999998889999999999999999998888999987777888899999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+|+..|.+.+.+.+.+.++|.+|+++|+++++..+..++.+++++++++.++.++++|+.+|.+++++++.|.++++|
T Consensus        92 i~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~~~~~K  171 (287)
T 3pef_A           92 VDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMK  171 (287)
T ss_dssp             EECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEEEEECSSTTHHHHHH
T ss_pred             EeCCCCCHHHHHHHHHHHHHhCCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCeEEeCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|.+.+.++++++|++.++++
T Consensus       172 l~~N~~~~~~~~~~~E~~~l~~~  194 (287)
T 3pef_A          172 LVVNMVMGGMMACFCEGLALGEK  194 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998863

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=100.00  E-value=1.6e-32  Score=211.13  Aligned_cols=179  Identities=33%  Similarity=0.483  Sum_probs=170.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..+|.+|+++||+|++|||++++.+.+.+.|+...++++++++ +|+||+++|++..++.++   +++.+.++++++|
T Consensus        26 mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~---~~l~~~l~~g~iv  101 (296)
T 3qha_A           26 MGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV---GELAGHAKPGTVI  101 (296)
T ss_dssp             THHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH---HHHHTTCCTTCEE
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH---HHHHHhcCCCCEE
Confidence            899999999999999999999999999999999988889999999 999999999988888888   8888999999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+|+..|.+.+.+.+.+.++|.+|+++|+++++..+..++..++++++++.+++++++|+.+|.+++++|+.|.|+++|
T Consensus       102 v~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~g~~g~a~~~K  181 (296)
T 3qha_A          102 AIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKHWAAVVIHAGEPGAGTRMK  181 (296)
T ss_dssp             EECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHH
T ss_pred             EEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHHHcCCeEEcCChhHHHHHH
Confidence            99999999999999999998999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|.+.+.++++++|++.++++
T Consensus       182 l~~N~~~~~~~~~~~E~~~l~~~  204 (296)
T 3qha_A          182 LARNMLTFTSYAAACEAMKLAEA  204 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998863

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=3.3e-32  Score=209.96  Aligned_cols=183  Identities=31%  Similarity=0.462  Sum_probs=171.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||.++|.+|++.|++|++|||++++.+.+.+.|... .+++.+++++||+||+++|+++.++.++++.+++.+.++++++
T Consensus        18 mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~i   97 (303)
T 3g0o_A           18 MGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSA   97 (303)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCE
T ss_pred             HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCE
Confidence            799999999999999999999999999999888877 7899999999999999999988899998776788899999999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCC-cchHHH
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGD-SGNGQV  158 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~-~g~a~~  158 (183)
                      |+|+|+..|.+.+.+.+.+.+.|.+|+++|+++++..+..++.+++++++++.++.++++|+.+|.+++++++ .|.+++
T Consensus        98 vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~  177 (303)
T 3g0o_A           98 VMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKPVLDAVASNVYRISDTPGAGST  177 (303)
T ss_dssp             EEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHEEEEEEEESSTTHHHH
T ss_pred             EEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHHHHHHHHHHCCCEEECCCCCcHHHH
Confidence            9999999999999999999889999999999999999999999999999999999999999999999999998 999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          159 AKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       159 ~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +|+++|.+.+.++++++|++.++++
T Consensus       178 ~Kl~~N~~~~~~~~~~~Ea~~l~~~  202 (303)
T 3g0o_A          178 VKIIHQLLAGVHIAAAAEAMALAAR  202 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998763

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=100.00  E-value=4.6e-32  Score=212.95  Aligned_cols=178  Identities=30%  Similarity=0.461  Sum_probs=168.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccC---CEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGA---EFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a---diVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||..||.+|+++|++|++|||++++++.+.+.|+...+++.++++++   |+||+++|.+ .++.++   +++.+.++++
T Consensus        33 mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl---~~l~~~l~~g  108 (358)
T 4e21_A           33 MGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML---QRMTPLLAAN  108 (358)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH---HHHGGGCCTT
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH---HHHHhhCCCC
Confidence            79999999999999999999999999999988988888999999888   9999999997 788888   8889999999


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhc-------------
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMG-------------  144 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-------------  144 (183)
                      ++|||+|++.|.+...+.+.+.++|++|+++|+++++..+..|. .++++|++++++.++++|+.+|             
T Consensus       109 ~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~-~im~GG~~~a~~~~~~ll~~lg~~~~~~~~~~~~~  187 (358)
T 4e21_A          109 DIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY-CLMIGGEKQAVERLDPVFRTLAPGIGAAPRTPGRE  187 (358)
T ss_dssp             CEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC-EEEEESCHHHHHHTHHHHHHHSCCGGGSCCCTTGG
T ss_pred             CEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC-eeeecCCHHHHHHHHHHHHHhccccccCccccccc
Confidence            99999999999999999999999999999999999999999998 8999999999999999999999             


Q ss_pred             -------CCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          145 -------RNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       145 -------~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                             .+++++|+.|+|+++|+++|.+.+.++++++|++.++++
T Consensus       188 ~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~  233 (358)
T 4e21_A          188 KREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHH  233 (358)
T ss_dssp             GCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                   568899999999999999999999999999999999874

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=100.00  E-value=9.2e-32  Score=208.94  Aligned_cols=181  Identities=33%  Similarity=0.542  Sum_probs=170.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..+|..|++.|++|++|||++++.+.+.+.|+...+++.++++++|+||+++|.+..++.++++. ++.+.++++++|
T Consensus        42 mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~-~~~~~l~~~~~v  120 (320)
T 4dll_A           42 MGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ-GVAAAMKPGSLF  120 (320)
T ss_dssp             THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT-CHHHHCCTTCEE
T ss_pred             HHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch-hHHhhCCCCCEE
Confidence            8999999999999999999999999999998898888899999999999999999988899998433 788889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+|++.|.+.+.+.+.+.+.|.+|+++|+++++..+..++..++++++++.++.++++|+.+ .+++++|+.|.|+++|
T Consensus       121 i~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~~K  199 (320)
T 4dll_A          121 LDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLLKVF-GRATHVGPHGSGQLTK  199 (320)
T ss_dssp             EECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH-EEEEEEESTTHHHHHH
T ss_pred             EecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHHHhc-CCEEEeCCccHHHHHH
Confidence            999999999999999999999999999999999998899999999999999999999999999 8899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccC
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +++|.+.+.++++++|++.++++
T Consensus       200 l~~N~~~~~~~~~~~Ea~~l~~~  222 (320)
T 4dll_A          200 LANQMIVGITIGAVAEALLFATK  222 (320)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998863

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=100.00  E-value=3.6e-32  Score=220.10  Aligned_cols=179  Identities=24%  Similarity=0.330  Sum_probs=165.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC-----CcccCCHHHHhc---cCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG-----ANMALSLSTLAS---GAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~---~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||.+||.+|+++||+|++|||++++.+.+.+.+     +..+.+++++++   .+|+||++||.++.++.++   +++.+
T Consensus        15 MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl---~~l~~   91 (484)
T 4gwg_A           15 MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDDFI---EKLVP   91 (484)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHHHH---HHHGG
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHHHHH---HHHHH
Confidence            899999999999999999999999999988763     223578888887   5999999999988899888   88999


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCe-----
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNI-----  147 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~-----  147 (183)
                      .+++|++|||+|++.+.+...+.+.+.++|++|+++|+++++..+..|+ .++++|++++++.++++|+.+|.++     
T Consensus        92 ~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-~im~GG~~ea~~~v~pll~~ig~~v~~~~~  170 (484)
T 4gwg_A           92 LLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-SLMPGGNKEAWPHIKTIFQGIAAKVGTGEP  170 (484)
T ss_dssp             GCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHHHHHSCBCTTSCB
T ss_pred             hcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC-eeecCCCHHHHHHHHHHHHHhcCcccCCCc
Confidence            9999999999999999999899999999999999999999999999998 8899999999999999999999877     


Q ss_pred             --EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          148 --VHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       148 --~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                        +++|+.|+|+++||++|.++++.+++++|++.++++
T Consensus       171 ~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~  208 (484)
T 4gwg_A          171 CCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKD  208 (484)
T ss_dssp             SBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              889999999999999999999999999999998863

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=99.97  E-value=6.5e-30  Score=208.30  Aligned_cols=178  Identities=21%  Similarity=0.288  Sum_probs=165.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----cCCcccCCHHHHhcc---CCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----EGANMALSLSTLASG---AEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~---adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||.+||.+|+++|++|++|||++++++.+.+     .|+..+.++.+++++   +|+||++||+++.++.++   +++.+
T Consensus        21 MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl---~~l~~   97 (497)
T 2p4q_A           21 MGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDALI---NQIVP   97 (497)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHHHH---HHHGG
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHHHH---HHHHH
Confidence            8999999999999999999999999999987     467777899998877   999999999988899998   88999


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCC------
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN------  146 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~------  146 (183)
                      .+++|++|||+|++.+.+...+.+.+.++|++|+++|+++++..+..|+ .++++++++.++.++++|+.+|.+      
T Consensus        98 ~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~-~im~gg~~e~~~~v~~ll~~~g~~~dGe~~  176 (497)
T 2p4q_A           98 LLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP-SLMPGGSEEAWPHIKNIFQSISAKSDGEPC  176 (497)
T ss_dssp             GCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHHHHHSCEETTEES
T ss_pred             hCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC-eEEecCCHHHHHHHHHHHHHhcCccCCCCc
Confidence            9999999999999999998888888888899999999999999999998 788899999999999999999988      


Q ss_pred             eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          147 IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       147 ~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +.++|+.|+++++||++|.+.+..+++++|++.+++
T Consensus       177 v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~  212 (497)
T 2p4q_A          177 CEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMK  212 (497)
T ss_dssp             CCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            788899999999999999999999999999998875

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=99.97  E-value=3e-29  Score=194.12  Aligned_cols=176  Identities=18%  Similarity=0.273  Sum_probs=159.9

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCC--chhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKN--TDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||.+||++|++.|+ +|++|||+  +++.+.+.+.|+...+++.+++++||+||+++|++...+ ++   +++.+.++++
T Consensus        35 mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~---~~l~~~l~~~  110 (312)
T 3qsg_A           35 AASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALE-VA---QQAGPHLCEG  110 (312)
T ss_dssp             HHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHH-HH---HHHGGGCCTT
T ss_pred             HHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHH-HH---HhhHhhcCCC
Confidence            79999999999999 99999997  578888888898888899999999999999999977665 44   7888999999


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCC-cc
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGD-SG  154 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~-~g  154 (183)
                      ++|+|+|+..|.+...+.+.+.++  |.+|+++|+++++.. ..+..+++++|+++  +.++++|+.+|.+++++++ .|
T Consensus       111 ~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~-~~g~l~i~vgg~~~--~~~~~ll~~~g~~~~~~g~~~g  187 (312)
T 3qsg_A          111 ALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKP-HGHRVPLVVDGDGA--RRFQAAFTLYGCRIEVLDGEVG  187 (312)
T ss_dssp             CEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTT-TGGGSEEEEESTTH--HHHHHHHHTTTCEEEECCSSTT
T ss_pred             CEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchh-hcCCEEEEecCChH--HHHHHHHHHhCCCeEEcCCCCC
Confidence            999999999999999999999888  999999999996554 46778899999887  8999999999999999998 89


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          155 NGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       155 ~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +|+++|+++|.+.++++++++|++.+|++
T Consensus       188 ~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~  216 (312)
T 3qsg_A          188 GAALLKMCRSAVLKGLEALFLEALAAAEK  216 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999875

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.5e-29  Score=196.16  Aligned_cols=174  Identities=15%  Similarity=0.207  Sum_probs=156.0

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCc-------hhHHHHHHcCCcccC-CHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNT-------DASQTLAKEGANMAL-SLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~-------~~~~~~~~~g~~~~~-~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||.++|.+|+++| ++|++|||++       +..+++.+.|+  .+ ++.+++++||+||++||++...+.+    +++.
T Consensus        35 mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~~~~----~~i~  108 (317)
T 4ezb_A           35 AAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAATKAVA----ASAA  108 (317)
T ss_dssp             HHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHHHHH----HHHG
T ss_pred             HHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHHHHH----HHHH
Confidence            7999999999999 9999999998       45566666676  66 8889999999999999997766654    7888


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeC
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      +.++++++|||+|++.|.+.+.+.+.+.+.|.+|+++|++++ ..+..+..+++++|+++  +.++++|+.+|.+++++|
T Consensus       109 ~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~-~~a~~g~l~i~vgg~~~--~~~~~ll~~~g~~v~~~g  185 (317)
T 4ezb_A          109 PHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMAR-VPPYAEKVPILVAGRRA--VEVAERLNALGMNLEAVG  185 (317)
T ss_dssp             GGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSC-STTTGGGSEEEEESTTH--HHHHHHHHTTTCEEEEEE
T ss_pred             hhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCC-chhhcCCEEEEEeCChH--HHHHHHHHHhCCCeEEeC
Confidence            999999999999999999999999999999999999999985 45566778899999877  899999999999999999


Q ss_pred             C-cchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          152 D-SGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       152 ~-~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      + .|+|+++|+++|.+.++++++++|++.+|++
T Consensus       186 ~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~  218 (317)
T 4ezb_A          186 ETPGQASSLKMIRSVMIKGVEALLIEALSSAER  218 (317)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8 9999999999999999999999999999864

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=99.96  E-value=4.9e-29  Score=202.57  Aligned_cols=178  Identities=23%  Similarity=0.302  Sum_probs=164.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----CCcccCCHHHHhcc---CCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE----GANMALSLSTLASG---AEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~---adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||.+||.+|+++|++|++|||++++.+.+.+.    |+..+.++.+++++   +|+||++||.++.++.++   +++.+.
T Consensus        26 MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~vl---~~l~~~  102 (480)
T 2zyd_A           26 MGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAI---DSLKPY  102 (480)
T ss_dssp             HHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHHHH---HHHGGG
T ss_pred             HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHHHH---HHHHhh
Confidence            89999999999999999999999999988875    67777899998887   999999999987889988   889999


Q ss_pred             CCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCC-------
Q psy755           74 AKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN-------  146 (183)
Q Consensus        74 l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~-------  146 (183)
                      +++|++|||++++.+.+...+.+.+.+.|++|+++|+++++..+..++ .++++++++.++.++++|+.+|.+       
T Consensus       103 l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~dGe~~  181 (480)
T 2zyd_A          103 LDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPILTKIAAVAEDGEPC  181 (480)
T ss_dssp             CCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEESCHHHHHHHHHHHHHHSCBCTTSCBS
T ss_pred             cCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC-eEEecCCHHHHHHHHHHHHHHhccccCCCce
Confidence            999999999999999988888888888899999999999999888888 788999999999999999999987       


Q ss_pred             eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          147 IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       147 ~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +.++|+.|.++++||++|.+.+..+++++|++.+++
T Consensus       182 v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~  217 (480)
T 2zyd_A          182 VTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLK  217 (480)
T ss_dssp             BCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            688899999999999999999999999999998875

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=99.96  E-value=4.4e-29  Score=192.73  Aligned_cols=177  Identities=18%  Similarity=0.259  Sum_probs=159.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||++|++.|++|++|||++++.+++.+.|....+++.++++++|+||+++|++..++.++. .+.+.+ +.+|++|
T Consensus        20 mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~-~~~l~~-~~~g~iv   97 (306)
T 3l6d_A           20 MGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG-MPGVAR-ALAHRTI   97 (306)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT-STTHHH-HTTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc-ccchhh-ccCCCEE
Confidence            79999999999999999999999999999888988888999999999999999999888888873 125544 5799999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEe--CC-cchHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHC--GD-SGNGQ  157 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~--g~-~g~a~  157 (183)
                      +|+|+..|.+.+.+.+.+.+.|.+|+++|++++++....+..+++++|+++.+++++++|+.+|.+++++  |+ .|+|+
T Consensus        98 id~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~  177 (306)
T 3l6d_A           98 VDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQHRALLEGLAGHTVFLPWDEALAFAT  177 (306)
T ss_dssp             EECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHHHHHHHTTCSEEEECCHHHHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcCCHHHHHHHHHHHHHhcCCEEEecCCCCccHHH
Confidence            9999999999999999999999999999999998777777778999999999999999999998899999  87 89999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          158 VAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       158 ~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      .+|    .+.+.++++++|++.++++
T Consensus       178 ~~k----~~~~~~~~~~~Ea~~la~~  199 (306)
T 3l6d_A          178 VLH----AHAFAAMVTFFEAVGAGDR  199 (306)
T ss_dssp             HHH----HHHHHHHHHHHHHHHHHHH
T ss_pred             HHH----HHHHHHHHHHHHHHHHHHH
Confidence            999    4566789999999998864

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=99.95  E-value=5.5e-27  Score=180.26  Aligned_cols=182  Identities=38%  Similarity=0.656  Sum_probs=165.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..++..|.+.|++|++|||++++.+.+.+.|+....++.++++++|+||+++|.+.+++.++++.+++.+.++++++|
T Consensus        16 ~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~v   95 (299)
T 1vpd_A           16 MGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVL   95 (299)
T ss_dssp             THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEE
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEE
Confidence            79999999999999999999999999998888888788899989999999999998888888876545677888999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +++++..+.+.+.+.+.+.+.|.+|+++|+++++..+..+...++++++++.++.++++|+.+|.+++++++.+++.++|
T Consensus        96 v~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~K  175 (299)
T 1vpd_A           96 IDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTK  175 (299)
T ss_dssp             EECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEEEEEEESTTHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHH
Confidence            99999999888888888888899999999998887777787788889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccc
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +++|.+....+.+++|++.+++
T Consensus       176 l~~n~~~~~~~~~~~Ea~~l~~  197 (299)
T 1vpd_A          176 LANQVIVALNIAAMSEALTLAT  197 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988765

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=99.95  E-value=3.4e-27  Score=191.79  Aligned_cols=178  Identities=24%  Similarity=0.336  Sum_probs=161.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----CCcccCCHHHHhcc---CCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE----GANMALSLSTLASG---AEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~---adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||.++|.+|+++|++|.+|||++++.+.+.+.    |+..+.++++++++   +|+||++||.++.++.++   +++.+.
T Consensus        16 mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl---~~l~~~   92 (474)
T 2iz1_A           16 MGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATI---KSLLPL   92 (474)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHH---HHHGGG
T ss_pred             HHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHH---HHHHhh
Confidence            79999999999999999999999999988775    66677889998876   999999999988888888   788899


Q ss_pred             CCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCC-------
Q psy755           74 AKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN-------  146 (183)
Q Consensus        74 l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~-------  146 (183)
                      +++|++|||++++.+.+...+.+.+.+.|++|+++|+++++..+..|+ .++.+++++.++.++++|+.+|.+       
T Consensus        93 l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~~dge~  171 (474)
T 2iz1_A           93 LDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP-SMMPGGQKEAYDLVAPIFEQIAAKAPQDGKP  171 (474)
T ss_dssp             CCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC-CEEEEECHHHHHHHHHHHHHHSCBCTTTCCB
T ss_pred             CCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC-eEEecCCHHHHHHHHHHHHHHhcccccCCCc
Confidence            999999999999998888888888877899999999999998888888 677888999999999999999987       


Q ss_pred             -eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          147 -IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       147 -~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                       +.++|+.|+++++|+++|.+.+..++.++|++.+++
T Consensus       172 ~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~  208 (474)
T 2iz1_A          172 CVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLK  208 (474)
T ss_dssp             SBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence             578899999999999999999999999999998875

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=99.95  E-value=1.5e-26  Score=177.62  Aligned_cols=182  Identities=48%  Similarity=0.822  Sum_probs=161.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..++..|.+.|++|++|||++++.+.+.+.|+...+++.++++++|+||+++|++..++.++...+.+.+.++++++|
T Consensus        11 mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~v   90 (296)
T 2gf2_A           11 MGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGILKKVKKGSLL   90 (296)
T ss_dssp             THHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGGGTCCTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHHhcCCCCCEE
Confidence            89999999999999999999999999998888887778899989999999999999888888873222355677899999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +++++..+.....+.+.+.+.+.+|+++|+.+++..+..+...++.+++++.++.++++|+.+|.+++++++.|+++.+|
T Consensus        91 v~~s~~~~~~~~~~~~~~~~~g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~k  170 (296)
T 2gf2_A           91 IDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAK  170 (296)
T ss_dssp             EECSCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHH
Confidence            99888888888888887777788999999998887777888888889999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccc
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +++|.+....+..++|++.+++
T Consensus       171 l~~n~~~~~~~~~~~Ea~~~~~  192 (296)
T 2gf2_A          171 ICNNMLLAISMIGTAEAMNLGI  192 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998775

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=99.95  E-value=4.6e-27  Score=191.38  Aligned_cols=178  Identities=24%  Similarity=0.320  Sum_probs=161.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----cCCcccCCHHHHhc---cCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----EGANMALSLSTLAS---GAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~---~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||.++|.+|+++|++|.+|||++++.+.+.+     .++..+.+++++++   ++|+||++||.++.++.++   +++.+
T Consensus        13 mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl---~~l~~   89 (482)
T 2pgd_A           13 MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFI---EKLVP   89 (482)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHH---HHHHH
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHHHH---HHHHh
Confidence            7999999999999999999999999999887     56777788988874   8999999999987888888   78889


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCe-----
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNI-----  147 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~-----  147 (183)
                      .+++|++|||++++.+.+...+.+.+.+.|++|+++|+++++..+..|+ .++.+++++..+.++++|+.+|.++     
T Consensus        90 ~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~-~i~~gg~~e~~~~v~~ll~~~g~~v~d~~~  168 (482)
T 2pgd_A           90 LLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP-SLMPGGNKEAWPHIKAIFQGIAAKVGTGEP  168 (482)
T ss_dssp             HCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECTTTHHHHHHHHHHHSCBCTTSCB
T ss_pred             hcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCC-eEEeCCCHHHHHHHHHHHHHhhhhccCCCc
Confidence            9999999999999999888788888888899999999999998888888 6788889999999999999999876     


Q ss_pred             --EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          148 --VHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       148 --~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                        .++|+.|.++++|+++|.+.+..+++++|++.+++
T Consensus       169 ~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~  205 (482)
T 2pgd_A          169 CCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMK  205 (482)
T ss_dssp             SCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              67888999999999999999999999999998875

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=99.95  E-value=1.8e-26  Score=177.56  Aligned_cols=182  Identities=39%  Similarity=0.664  Sum_probs=164.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..++..|.+.|++|++|||++++.+.+.+.|+...+++.++++++|+||+++|.+.+++.++.+.+++.+.++++++|
T Consensus        15 ~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~v   94 (301)
T 3cky_A           15 MGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVI   94 (301)
T ss_dssp             THHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEE
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEE
Confidence            79999999999999999999999999988877887778899999999999999999888888874323777888999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +++++..+.....+.+.+.+.+.+|+++|+.+++..+..+..+++++++++.++.++++|+.+|.+++++++.|++.++|
T Consensus        95 v~~~~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~K  174 (301)
T 3cky_A           95 VDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVK  174 (301)
T ss_dssp             EECCCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHH
Confidence            99999998888888888888899999999998887777787778888899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccc
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +++|.+....+..+.|++.+++
T Consensus       175 l~~N~~~~~~~~~~~Ea~~l~~  196 (301)
T 3cky_A          175 IVNNLLLGCNMASLAEALVLGV  196 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988765

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=99.94  E-value=4.4e-26  Score=174.84  Aligned_cols=181  Identities=31%  Similarity=0.529  Sum_probs=162.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..+|..|.+.|++|++|| ++++.+.+.+.|+...+++.++++++|+||+++|.+.+++.++.+.+++.+.++++++|
T Consensus        14 ~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~v   92 (295)
T 1yb4_A           14 MGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTI   92 (295)
T ss_dssp             THHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEE
T ss_pred             HHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEE
Confidence            89999999999999999999 99999988887887788899999999999999999888888874222778888999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +++++..+.....+.+.+.+++.+|++.|+.+++..+..+..+++++++++.++.++++|+.+|.+++++++.+++.++|
T Consensus        93 v~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~K  172 (295)
T 1yb4_A           93 VDMSSISPIETKRFAQRVNEMGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKNITLVGGNGDGQTCK  172 (295)
T ss_dssp             EECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEESTTHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHH
Confidence            99999988888888888888899999999999887777788778888999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccc
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +++|.+....+..+.|++.+++
T Consensus       173 l~~n~~~~~~~~~~~E~~~l~~  194 (295)
T 1yb4_A          173 VANQIIVALNIEAVSEALVFAS  194 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988775

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=99.94  E-value=3.8e-26  Score=185.71  Aligned_cols=178  Identities=19%  Similarity=0.313  Sum_probs=160.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-C-------CcccCCHHHHhcc---CCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-G-------ANMALSLSTLASG---AEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g-------~~~~~~~~~~~~~---adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      ||..+|.+|+++|++|++|||++++.+.+.+. |       +..+.++++++++   +|+||++||.++.++.++   ++
T Consensus        12 mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~vl---~~   88 (478)
T 1pgj_A           12 MGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTI---EQ   88 (478)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHH---HH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHHHHHHH---HH
Confidence            79999999999999999999999999888765 5       5567788888774   999999999987888887   78


Q ss_pred             ccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCC---
Q psy755           70 ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRN---  146 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~---  146 (183)
                      +.+.+.+|++|||++++.+.+...+.+.+.+.|.+|+++|+.+++..+..++ .++++++++..+.++++|+.+|.+   
T Consensus        89 l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~d  167 (478)
T 1pgj_A           89 LKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP-AFFPGGTLSVWEEIRPIVEAAAAKADD  167 (478)
T ss_dssp             HHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC-EEEEEECHHHHHHHHHHHHHHSCBCTT
T ss_pred             HHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC-eEeccCCHHHHHHHHHHHHHhcccccC
Confidence            8899999999999999998888888888887899999999999998888888 677888999999999999999987   


Q ss_pred             ----eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          147 ----IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       147 ----~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                          +.++|+.|.++++|+++|.+.+..++.++|++.+++
T Consensus       168 g~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~  207 (478)
T 1pgj_A          168 GRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILR  207 (478)
T ss_dssp             SCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence                678899999999999999999999999999998875

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=99.94  E-value=2.2e-25  Score=172.66  Aligned_cols=182  Identities=28%  Similarity=0.482  Sum_probs=163.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..+|..|.+.|++|++|||++++.+.+.+.|.....++.++++++|+||+++|.+..++.++....++.+.+.++++|
T Consensus        41 mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~v  120 (316)
T 2uyy_A           41 MGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCY  120 (316)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEE
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEE
Confidence            78999999999999999999999999988888887778898989999999999998888888874322345778899999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +|+++..+.....+.+.+...+..|+++|+++++.....+...++++++++.++.++++|+.+|.+++++++.+.+.+.|
T Consensus       121 v~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K  200 (316)
T 2uyy_A          121 VDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMM  200 (316)
T ss_dssp             EECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEEEEECSSTTHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHH
Confidence            99999998888888888877889999999999988888888788888899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccc
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      ++.|.+.+..+..+.|++.+++
T Consensus       201 ~~~n~~~~~~~~~~~Ea~~la~  222 (316)
T 2uyy_A          201 LIVNMVQGSFMATIAEGLTLAQ  222 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998875

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=99.93  E-value=3.9e-26  Score=183.57  Aligned_cols=179  Identities=17%  Similarity=0.203  Sum_probs=147.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--------------------CCcccCCHHHHhccCCEEEEecCChH--
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--------------------GANMALSLSTLASGAEFIISMLPASQ--   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--------------------g~~~~~~~~~~~~~adiVi~~vp~~~--   58 (183)
                      ||.++|..|+++||+|++|||++++++.+.+.                    ++..++++.+++++||+||+|||.+.  
T Consensus        19 vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDvvii~Vptp~~~   98 (446)
T 4a7p_A           19 VGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADAVFIAVGTPSRR   98 (446)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSEEEECCCCCBCT
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCEEEEEcCCCCcc
Confidence            79999999999999999999999999887652                    13456788899999999999998875  


Q ss_pred             --------HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCce--------
Q psy755           59 --------DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATL--------  122 (183)
Q Consensus        59 --------~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--------  122 (183)
                              .++.++   +++.+.++++++||+.|+..|.+.+.+.+.+.+.+.. .+.++..+|+.+.+|..        
T Consensus        99 ~~~~~Dl~~v~~v~---~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~-~d~~v~~~Pe~a~eG~a~~d~~~p~  174 (446)
T 4a7p_A           99 GDGHADLSYVFAAA---REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPN-SGAKVVSNPEFLREGAAIEDFKRPD  174 (446)
T ss_dssp             TTCCBCTHHHHHHH---HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTT-SCCEEEECCCCCCTTSHHHHHHSCS
T ss_pred             ccCCccHHHHHHHH---HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCC-CCceEEeCcccccccchhhhccCCC
Confidence                    478887   8889999999999999999999999999888876432 33334444444444432        


Q ss_pred             EEEecC-CHHHHHHHHHHHHHhcCC---eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          123 TFMVGG-DKSSLEKAKPILKCMGRN---IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       123 ~~~~~g-~~~~~~~~~~l~~~~g~~---~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      .+++++ +++..+.++++++.++.+   ++++++.++|+++|++.|.+.++++++++|+..+|++
T Consensus       175 ~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~  239 (446)
T 4a7p_A          175 RVVVGTEDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLCEQ  239 (446)
T ss_dssp             CEEEECSCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            466666 478899999999998875   5888899999999999999999999999999999874

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=99.93  E-value=1.9e-25  Score=170.82  Aligned_cols=176  Identities=30%  Similarity=0.516  Sum_probs=157.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..++..|.+ |++|++|||++++.+.+.+.|....+ +.+++.++|+||+++|.++.++.++   +++.+.++++++|
T Consensus        12 ~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~---~~l~~~l~~~~~v   86 (289)
T 2cvz_A           12 MGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA---EALYPYLREGTYW   86 (289)
T ss_dssp             THHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH---HHHTTTCCTTEEE
T ss_pred             HHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH---HHHHhhCCCCCEE
Confidence            79999999999 99999999999999888777766655 7777889999999999987788877   7788888899999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      +++|+..+.....+.+.+.+.+.+|+++|+++++..+..+..+++++++++.++.++++| .+|.+++++++.+.+.++|
T Consensus        87 v~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k  165 (289)
T 2cvz_A           87 VDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVK  165 (289)
T ss_dssp             EECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHH
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHH
Confidence            999999988888888888888889999999888877777887788889999999999999 9999888999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccc
Q psy755          161 LCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       161 ~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      ++.|.+....+..++|++.+++
T Consensus       166 ~~~n~~~~~~~~~~~Ea~~l~~  187 (289)
T 2cvz_A          166 AINNALLAVNLWAAGEGLLALV  187 (289)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988775

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=99.93  E-value=1e-24  Score=174.29  Aligned_cols=180  Identities=19%  Similarity=0.248  Sum_probs=146.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccC-CHHHH---------------hccCCEEEEecCChHH-----
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMAL-SLSTL---------------ASGAEFIISMLPASQD-----   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~---------------~~~adiVi~~vp~~~~-----   59 (183)
                      ||.++|..|+++||+|++||+++++++.+.+.+....+ .++++               +++||+||+|||.+..     
T Consensus        22 vGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii~VpTp~~~~~~~  101 (431)
T 3ojo_A           22 IGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFIIAVPTPNNDDQYR  101 (431)
T ss_dssp             THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEEECCCCCBCSSSSC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEEEEeCCCccccccC
Confidence            89999999999999999999999999998764322211 12211               3579999999999862     


Q ss_pred             ------HHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh-cCC------cEEeecccCCHHHHhcC---ceE
Q psy755           60 ------VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE-KQI------TFLDAPVSGGTKAAQEA---TLT  123 (183)
Q Consensus        60 ------~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~-~g~------~~~~~~~~~~~~~~~~~---~~~  123 (183)
                            +....   +++.+.+++|++||+.||+.|.+.+.+.+.+.+ .|.      .++++|.+..+..+..+   +..
T Consensus       102 ~~Dl~~V~~~~---~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p~~  178 (431)
T 3ojo_A          102 SCDISLVMRAL---DSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNR  178 (431)
T ss_dssp             BBCCHHHHHHH---HHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCCCCCTTSHHHHHHHSCE
T ss_pred             CccHHHHHHHH---HHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCCcCCCcchhhcccCCCE
Confidence                  44444   788999999999999999999999998876544 453      67889977655433322   225


Q ss_pred             EEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          124 FMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       124 ~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      ++.+++++..+.++++++.++..++++++.++|+++|+++|.+.++++++++|+..+|++
T Consensus       179 Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~  238 (431)
T 3ojo_A          179 IIGGVTKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNN  238 (431)
T ss_dssp             EEEESSHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            678889999999999999999888888999999999999999999999999999999874

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=99.92  E-value=1.8e-24  Score=172.76  Aligned_cols=176  Identities=15%  Similarity=0.175  Sum_probs=149.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc------------------CCcccCCHHHHhccCCEEEEecCChH----
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE------------------GANMALSLSTLASGAEFIISMLPASQ----   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~adiVi~~vp~~~----   58 (183)
                      ||.++|..|++ |++|++||+++++++.+.+.                  ++..++++.+++++||+||+|+|.+.    
T Consensus        47 mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvViiaVPt~~~~~~  125 (432)
T 3pid_A           47 VGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVIIATPTDYDPKT  125 (432)
T ss_dssp             HHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEEEECCCCEEETTT
T ss_pred             HHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEEEEeCCCcccccc
Confidence            79999999998 99999999999998887652                  34556788899999999999999972    


Q ss_pred             ------HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCce---EEEecCC
Q psy755           59 ------DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATL---TFMVGGD  129 (183)
Q Consensus        59 ------~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~g~  129 (183)
                            .++.++   +++.+ +++|++||+.|++.|.+.+.+.+.+.+.+  +..+|.++.+..+..+.+   .+++|++
T Consensus       126 ~~~Dl~~V~~v~---~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~--v~~sPe~~~~G~A~~~~l~p~rIvvG~~  199 (432)
T 3pid_A          126 NYFNTSTVEAVI---RDVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDN--VIFSPEFLREGRALYDNLHPSRIVIGER  199 (432)
T ss_dssp             TEEECHHHHHHH---HHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCC--EEECCCCCCTTSHHHHHHSCSCEEESSC
T ss_pred             ccccHHHHHHHH---HHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhcc--EeecCccCCcchhhhcccCCceEEecCC
Confidence                  566666   78888 99999999999999999999998887654  455999988876665444   6888998


Q ss_pred             HHHHHHHHHHHHH--hcCC-eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          130 KSSLEKAKPILKC--MGRN-IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       130 ~~~~~~~~~l~~~--~g~~-~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      ++..+++.++|..  ++.. +++.++.++|+++|++.|.+.++++++++|+..+|++
T Consensus       200 ~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae~  256 (432)
T 3pid_A          200 SARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAES  256 (432)
T ss_dssp             SHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888999999987  4533 4667889999999999999999999999999999874

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=99.91  E-value=1.1e-24  Score=176.22  Aligned_cols=179  Identities=16%  Similarity=0.171  Sum_probs=146.4

Q ss_pred             CcHHHHHHHHhC-CC-cEEEEcCCch----hHHHHHHc---------------------C-CcccCCHHHHhccCCEEEE
Q psy755            1 MGSHMARNLLKN-GH-DVIVYDKNTD----ASQTLAKE---------------------G-ANMALSLSTLASGAEFIIS   52 (183)
Q Consensus         1 mG~~iA~~l~~~-g~-~V~~~~~~~~----~~~~~~~~---------------------g-~~~~~~~~~~~~~adiVi~   52 (183)
                      ||.++|..|+++ || +|++||++++    +++.+.+.                     + +..+++ .+++++||+||+
T Consensus        29 mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd-~ea~~~aDvVii  107 (478)
T 3g79_A           29 VGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD-FSRISELDAVTL  107 (478)
T ss_dssp             THHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-GGGGGGCSEEEE
T ss_pred             HHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-HHHHhcCCEEEE
Confidence            899999999999 99 9999999999    88777542                     2 223344 677889999999


Q ss_pred             ecCChH--------H---HHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHH--hcC------CcEEeecccCC
Q psy755           53 MLPASQ--------D---VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAR--EKQ------ITFLDAPVSGG  113 (183)
Q Consensus        53 ~vp~~~--------~---~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~--~~g------~~~~~~~~~~~  113 (183)
                      |||.+.        +   +..+.   +++.+.+++|++||+.|++.|.+.+.+.+.+.  ..|      +.++++|.+..
T Consensus       108 aVptp~~~~~~~~~dl~~v~~~~---~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~d~~v~~~Pe~~~  184 (478)
T 3g79_A          108 AIQTPFANPKDLEPDFSALIDGI---RNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFALAHAPERVM  184 (478)
T ss_dssp             CCCCCCCSSCCSSCCCHHHHHHH---HHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTTTBEEEECCCCCC
T ss_pred             ecCCchhccCCccccHHHHHHHH---HHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCCceeEEeCCccCC
Confidence            999873        2   34443   78889999999999999999999988876433  234      46888998776


Q ss_pred             HHHHhcC---ceEEEecCCHHHHHHHHHHHHHh-cCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          114 TKAAQEA---TLTFMVGGDKSSLEKAKPILKCM-GRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       114 ~~~~~~~---~~~~~~~g~~~~~~~~~~l~~~~-g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +..+..+   ...++.|++++..+.++++++.+ +..++++++.++|+++|+++|.+.++++++++|+..+|++
T Consensus       185 ~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a~~Ia~~nE~~~l~e~  258 (478)
T 3g79_A          185 VGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQIAAINQLALYCEA  258 (478)
T ss_dssp             TTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5444322   12577888999999999999999 8889999999999999999999999999999999999874

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=99.91  E-value=9.2e-24  Score=159.59  Aligned_cols=168  Identities=17%  Similarity=0.217  Sum_probs=144.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcC--CchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDK--NTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.++|..|++.|++|++|||  ++++.+.+.+.|+.  +++.++++++|+||+++|++...+.+    .++.+.+++  
T Consensus        11 mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~----~~~~~~~~~--   82 (264)
T 1i36_A           11 VAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAA----RRAGRHVRG--   82 (264)
T ss_dssp             HHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHH----HHHHTTCCS--
T ss_pred             HHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHH----HHHHHhcCc--
Confidence            799999999999999999999  77778887777766  67888889999999999987766665    566676655  


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCC-cchHH
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGD-SGNGQ  157 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~-~g~a~  157 (183)
                      +|+|+++..+.+...+.+.+.+.|  |+++|+.+++..+..+.. +++++++.  +.+++ |+.+|.+++++++ .|.+.
T Consensus        83 ~vi~~s~~~~~~~~~l~~~~~~~g--~~~~~v~~~~~~~~~g~~-~~~~g~~~--~~~~~-l~~~g~~~~~~~~~~g~~~  156 (264)
T 1i36_A           83 IYVDINNISPETVRMASSLIEKGG--FVDAAIMGSVRRKGADIR-IIASGRDA--EEFMK-LNRYGLNIEVRGREPGDAS  156 (264)
T ss_dssp             EEEECSCCCHHHHHHHHHHCSSSE--EEEEEECSCHHHHGGGCE-EEEESTTH--HHHHG-GGGGTCEEEECSSSTTHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHhhCC--eeeeeeeCCccccccCCe-EEecCCcH--HHhhh-HHHcCCeeEECCCCcCHHH
Confidence            999999998888888888877766  889999999888878876 77777665  78888 9999998889997 89999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          158 VAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       158 ~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      ++|++.|.+....+..++|++.+++
T Consensus       157 ~~kl~~n~~~~~~~~~~~Ea~~la~  181 (264)
T 1i36_A          157 AIKMLRSSYTKGVSALLWETLTAAH  181 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998875

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=99.91  E-value=2.2e-24  Score=174.02  Aligned_cols=180  Identities=17%  Similarity=0.181  Sum_probs=145.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--------------------CCcccCCHHHHhccCCEEEEecCChH--
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--------------------GANMALSLSTLASGAEFIISMLPASQ--   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--------------------g~~~~~~~~~~~~~adiVi~~vp~~~--   58 (183)
                      ||.++|..|+++|++|++||+++++++.+.+.                    ++..++++.+++++||+||+|+|.+.  
T Consensus        13 vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvViiaVptp~~~   92 (450)
T 3gg2_A           13 VGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADIIFIAVGTPAGE   92 (450)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEEEECCCCCBCT
T ss_pred             HHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEEEEEcCCCccc
Confidence            79999999999999999999999998887662                    13446788888999999999999874  


Q ss_pred             -------HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCc---EEeecccCCHHHHhcCce------
Q psy755           59 -------DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQIT---FLDAPVSGGTKAAQEATL------  122 (183)
Q Consensus        59 -------~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~------  122 (183)
                             .++.++   +++.+.++++++|++.|+..|.+.+.+.+.+.+.+..   ..+.++..+|+.+..|..      
T Consensus        93 ~~~~dl~~v~~v~---~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~eG~~~~~~~~  169 (450)
T 3gg2_A           93 DGSADMSYVLDAA---RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLKEGNAIDDFMK  169 (450)
T ss_dssp             TSSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTSHHHHHHS
T ss_pred             CCCcChHHHHHHH---HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhhhcccchhhhccC
Confidence                   677877   8889999999999999999999998888877664211   122333333433333332      


Q ss_pred             --EEEecC-CHHHHHHHHHHHHHhcC--CeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          123 --TFMVGG-DKSSLEKAKPILKCMGR--NIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       123 --~~~~~g-~~~~~~~~~~l~~~~g~--~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                        .+++++ +++..+.++++++.++.  .++++++.++|+++|++.|.+.++++++++|+..+|++
T Consensus       170 p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~  235 (450)
T 3gg2_A          170 PDRVVVGVDSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVANLCER  235 (450)
T ss_dssp             CSCEEEEESSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              355564 68999999999999986  36788899999999999999999999999999999874

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=99.90  E-value=3.1e-24  Score=160.72  Aligned_cols=167  Identities=19%  Similarity=0.307  Sum_probs=132.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh--------------HHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA--------------SQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~--------------~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||.+||.+|+++|++|++|||++++              .+.+.+. +.....++.+++++||+||+++|+.... .++ 
T Consensus        30 mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvVilavp~~~~~-~~~-  107 (245)
T 3dtt_A           30 VGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELVVNATEGASSI-AAL-  107 (245)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEEEECSCGGGHH-HHH-
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEEEEccCcHHHH-HHH-
Confidence            7999999999999999999999987              4554433 5555678899999999999999986544 554 


Q ss_pred             CCccc-cccCCCCcEEEeccCC-----------CchhHHHHHHHHHh--------cCCcEEeecccCCHHHHhcCceEEE
Q psy755           66 GSDGI-LKHAKPGVIVIDSSTV-----------DPQVPQTLSNLARE--------KQITFLDAPVSGGTKAAQEATLTFM  125 (183)
Q Consensus        66 ~~~~l-~~~l~~~~iiid~s~~-----------~~~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~  125 (183)
                        .++ .+.+ ++++|||+++.           .|.+.....+.+.+        ++++++++|+.+++..+..++..++
T Consensus       108 --~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~a~v~~~~~~a~~g~~~~~  184 (245)
T 3dtt_A          108 --TAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMNASLMVDPGRAAGGDHSVF  184 (245)
T ss_dssp             --HHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSCHHHHHCGGGTGGGCCCEE
T ss_pred             --HHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccCHHHhcCccccCCCCeeEE
Confidence              566 5666 89999999943           33333333333333        3788889999998887777777677


Q ss_pred             ecC-CHHHHHHHHHHHHHhcCC-eEEeCCcchHHHHHHHHHHHHHHHHH
Q psy755          126 VGG-DKSSLEKAKPILKCMGRN-IVHCGDSGNGQVAKLCNNMLLGVTMM  172 (183)
Q Consensus       126 ~~g-~~~~~~~~~~l~~~~g~~-~~~~g~~g~a~~~k~~~~~~~~~~~~  172 (183)
                      ++| +++.++.++++|+.+|.+ ++++|+.|+|+.+|+++|++...+..
T Consensus       185 v~g~d~~~~~~v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~~l~~~  233 (245)
T 3dtt_A          185 VSGNDAAAKAEVATLLKSLGHQDVIDLGDITTARGAEMLLPVWIRLWGA  233 (245)
T ss_dssp             EECSCHHHHHHHHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHHHHHHH
T ss_pred             EECCCHHHHHHHHHHHHHcCCCceeccCcHHHHHHhhhhHHHHHHHHHH
Confidence            655 689999999999999975 58999999999999999999988754

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=99.90  E-value=1.6e-23  Score=170.02  Aligned_cols=180  Identities=13%  Similarity=0.184  Sum_probs=148.0

Q ss_pred             CcHHHHHHHHhC--CCcEEEEcCCchhHHHHHH-------------------cCCcccCCHHHHhccCCEEEEecCChHH
Q psy755            1 MGSHMARNLLKN--GHDVIVYDKNTDASQTLAK-------------------EGANMALSLSTLASGAEFIISMLPASQD   59 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~~~~~~~~~~~~~~~-------------------~g~~~~~~~~~~~~~adiVi~~vp~~~~   59 (183)
                      ||.++|..|+++  |++|++|||++++++.+.+                   .++..++++.+++++||+||+|||.+..
T Consensus        16 mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~aDvViiaVptp~~   95 (467)
T 2q3e_A           16 VGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTK   95 (467)
T ss_dssp             THHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSEEEECCCCCBC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcCCEEEEEcCCchh
Confidence            899999999998  8999999999998887532                   2344556788888999999999988764


Q ss_pred             --------------HHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceE--
Q psy755           60 --------------VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLT--  123 (183)
Q Consensus        60 --------------~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--  123 (183)
                                    +..++   +++.+.++++++|+++|+..+.+.+.+.+.+++.+..+++.++..+|+....|...  
T Consensus        96 ~~~v~~~~~~dl~~v~~~~---~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~~~G~~~~d  172 (467)
T 2q3e_A           96 TYGMGKGRAADLKYIEACA---RRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKD  172 (467)
T ss_dssp             CSSTTTTTSBCCHHHHHHH---HHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCCCTTSHHHH
T ss_pred             hccccccCCCcHHHHHHHH---HHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHhhcccchhh
Confidence                          33444   66778889999999999999999888888888766545566666666666656543  


Q ss_pred             ------EEecC-----CHHHHHHHHHHHHHh-cCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          124 ------FMVGG-----DKSSLEKAKPILKCM-GRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       124 ------~~~~g-----~~~~~~~~~~l~~~~-g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                            +++++     +++..+.++++++.+ |..++++++.+.+++.|++.|.+.++++++++|+..+|++
T Consensus       173 ~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~  244 (467)
T 2q3e_A          173 LKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEA  244 (467)
T ss_dssp             HHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  66666     678889999999999 7778889999999999999999999999999999999864

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=99.88  E-value=2.4e-22  Score=163.26  Aligned_cols=179  Identities=18%  Similarity=0.193  Sum_probs=143.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC--------------------CcccCCHHHHhccCCEEEEecCCh---
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG--------------------ANMALSLSTLASGAEFIISMLPAS---   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--------------------~~~~~~~~~~~~~adiVi~~vp~~---   57 (183)
                      ||.++|..|+++||+|++||+++++++.+.+.+                    +..++++.+.+++||+||+|||.|   
T Consensus        19 vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDvviiaVptp~~~   98 (478)
T 2y0c_A           19 VGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDE   98 (478)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSEEEECCCCCBCT
T ss_pred             HHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCEEEEEeCCCccc
Confidence            799999999999999999999999998887642                    234556777888999999999986   


Q ss_pred             ------HHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc---CCcE-EeecccCCHHHHhcCce-----
Q psy755           58 ------QDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK---QITF-LDAPVSGGTKAAQEATL-----  122 (183)
Q Consensus        58 ------~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~---g~~~-~~~~~~~~~~~~~~~~~-----  122 (183)
                            ..++.++   +++.+.++++++|++.|+..|.+.+.+.+.+.+.   | .| ++.++..+|+....|..     
T Consensus        99 ~~~~dl~~v~~v~---~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g-~~~~~~~v~~~Pe~~~eG~~~~~~~  174 (478)
T 2y0c_A           99 DGSADLQYVLAAA---RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKR-GGDQMFSVVSNPEFLKEGAAVDDFT  174 (478)
T ss_dssp             TSSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHT-TCCCCEEEEECCCCCCTTCHHHHHH
T ss_pred             CCCccHHHHHHHH---HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCC-CCCccEEEEEChhhhcccceeeccC
Confidence                  6788887   8889999999999999999899888887777653   3 22 33334444444444432     


Q ss_pred             ---EEEecCC-H----HHHHHHHHHHHHhcC--CeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          123 ---TFMVGGD-K----SSLEKAKPILKCMGR--NIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       123 ---~~~~~g~-~----~~~~~~~~l~~~~g~--~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                         .++.+++ +    +..+.++++++.++.  .++++++.+.+++.|++.|.+..+++++++|+..+|++
T Consensus       175 ~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~la~~  245 (478)
T 2y0c_A          175 RPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADR  245 (478)
T ss_dssp             SCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               3555544 5    678899999998775  57888899999999999999999999999999999864

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=99.87  E-value=2.7e-22  Score=161.57  Aligned_cols=179  Identities=16%  Similarity=0.148  Sum_probs=140.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-------------------C-CcccCCHHHHhccCCEEEEecCChHH-
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-------------------G-ANMALSLSTLASGAEFIISMLPASQD-   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-------------------g-~~~~~~~~~~~~~adiVi~~vp~~~~-   59 (183)
                      ||..+|..|++.|++|++||+++++++.+.+.                   | +..++++.+++++||+||+|||.+.. 
T Consensus        11 vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvviiaVptp~~~   90 (436)
T 1mv8_A           11 VGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSFICVGTPSKK   90 (436)
T ss_dssp             THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEEEECCCCCBCT
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEEEEEcCCCccc
Confidence            79999999999999999999999998887762                   2 34456788888999999999998775 


Q ss_pred             --------HHHHhcCCccccccCCC---CcEEEeccCCCchh-HHHHHHHHHhc-CCcE-EeecccCCHHHHhcCce---
Q psy755           60 --------VLDAYDGSDGILKHAKP---GVIVIDSSTVDPQV-PQTLSNLAREK-QITF-LDAPVSGGTKAAQEATL---  122 (183)
Q Consensus        60 --------~~~v~~~~~~l~~~l~~---~~iiid~s~~~~~~-~~~~~~~~~~~-g~~~-~~~~~~~~~~~~~~~~~---  122 (183)
                              ++.++   +++.+.+++   +++|++.|+..+.+ .+.+.+.+++. +.++ ++.++..+|+....|..   
T Consensus        91 ~~~~dl~~v~~v~---~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~~~~G~~~~~  167 (436)
T 1mv8_A           91 NGDLDLGYIETVC---REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKD  167 (436)
T ss_dssp             TSSBCCHHHHHHH---HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHH
T ss_pred             CCCcchHHHHHHH---HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECcccccccccchh
Confidence                    77777   788888888   99999999999888 66777777664 5433 22233333333333322   


Q ss_pred             -----EEEecC-CHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          123 -----TFMVGG-DKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       123 -----~~~~~g-~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                           .++.++ +++..+.++++++.++.++++ ++.+.+++.|++.|.+...++++++|+..+|++
T Consensus       168 ~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~  233 (436)
T 1mv8_A          168 YDFPPMTVIGELDKQTGDLLEEIYRELDAPIIR-KTVEVAEMIKYTCNVWHAAKVTFANEIGNIAKA  233 (436)
T ss_dssp             HHSCSCEEEEESSHHHHHHHHHHHTTSSSCEEE-EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCHHHHHHHHHHHhccCCCEEc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                 345555 488889999999999985544 778999999999999999999999999998863

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=99.86  E-value=1.9e-21  Score=158.22  Aligned_cols=180  Identities=16%  Similarity=0.182  Sum_probs=141.8

Q ss_pred             CcHHHHHHHHhC--CCcEEEEcCCchhHHHHHHcC-------------------CcccCCHHHHhccCCEEEEecCChH-
Q psy755            1 MGSHMARNLLKN--GHDVIVYDKNTDASQTLAKEG-------------------ANMALSLSTLASGAEFIISMLPASQ-   58 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~~~~~~~~~~~~~~~~g-------------------~~~~~~~~~~~~~adiVi~~vp~~~-   58 (183)
                      ||.++|..|+++  |++|++||+++++++.+.+.+                   ...++++.+.+++||+||+|||.+. 
T Consensus        20 vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~aDvvii~Vptp~~   99 (481)
T 2o3j_A           20 VGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTPTK   99 (481)
T ss_dssp             THHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHCSEEEECCCCCBC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcCCEEEEecCCccc
Confidence            799999999998  799999999999988876521                   2334566788889999999998764 


Q ss_pred             -------------HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh-cCC------cEEeecccCCHHHHh
Q psy755           59 -------------DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE-KQI------TFLDAPVSGGTKAAQ  118 (183)
Q Consensus        59 -------------~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~-~g~------~~~~~~~~~~~~~~~  118 (183)
                                   .+..++   +++.+.++++++|++.|+..|.+.+.+.+.+.+ .+.      .+..+|.+..+..+.
T Consensus       100 ~~g~~~~~~~dl~~v~~~~---~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~Pe~~~~G~a~  176 (481)
T 2o3j_A          100 MYGRGKGMAPDLKYVESVS---RTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAM  176 (481)
T ss_dssp             CSSTTTTTSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEEECCCCCCTTCHH
T ss_pred             cccccccCCCcHHHHHHHH---HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEEeCcccccccchh
Confidence                         366666   788899999999999999999999888888877 542      234466554433222


Q ss_pred             c---CceEEEecCCH-----HHHHHHHHHHHHhcC-CeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          119 E---ATLTFMVGGDK-----SSLEKAKPILKCMGR-NIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       119 ~---~~~~~~~~g~~-----~~~~~~~~l~~~~g~-~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      .   ....++++++.     +..+.++++++.++. .++++++.+++++.|++.|.+..+++++++|+..+|++
T Consensus       177 ~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~~nE~~~la~~  250 (481)
T 2o3j_A          177 KDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEA  250 (481)
T ss_dssp             HHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1   11135555543     577899999999996 78888899999999999999999999999999999874

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=99.85  E-value=3.1e-20  Score=143.60  Aligned_cols=169  Identities=17%  Similarity=0.243  Sum_probs=140.3

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHcCC--cccCCHHH-HhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKEGA--NMALSLST-LASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~g~--~~~~~~~~-~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||+++|+.|.+.|+  +|++|||++++.+.+.+.|.  ...+++.+ ++++||+||+|+|.. .+..++   +++.+.++
T Consensus        44 mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~vl---~~l~~~l~  119 (314)
T 3ggo_A           44 MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA---KKLSYILS  119 (314)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG-GHHHHH---HHHHHHSC
T ss_pred             HHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH-HHHHHH---HHHhhccC
Confidence            79999999999999  99999999999999888886  34667888 899999999999985 467776   88889999


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCC----HHHHh----cCceEEEec---CCHHHHHHHHHHHHHh
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGG----TKAAQ----EATLTFMVG---GDKSSLEKAKPILKCM  143 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~----~~~~~----~~~~~~~~~---g~~~~~~~~~~l~~~~  143 (183)
                      ++++|+|++++++.....+.+.++.   +|+. +|+++.    +..+.    .+..++++.   ++++.++.++++|+.+
T Consensus       120 ~~~iv~d~~Svk~~~~~~~~~~l~~---~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~  196 (314)
T 3ggo_A          120 EDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDV  196 (314)
T ss_dssp             TTCEEEECCSCCTHHHHHHHHHHGG---GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHHHHHHHHHT
T ss_pred             CCcEEEECCCCcHHHHHHHHHhcCC---CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHc
Confidence            9999999999998887777777654   7787 798874    43333    466677764   5789999999999999


Q ss_pred             cCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHH
Q psy755          144 GRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAE  176 (183)
Q Consensus       144 g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E  176 (183)
                      |.+++++++.....+++.++..-.....+...-
T Consensus       197 G~~v~~~~~~~hD~~~a~~s~lph~~a~~l~~~  229 (314)
T 3ggo_A          197 GGVVEYMSPELHDYVFGVVSHLPHAVAFALVDT  229 (314)
T ss_dssp             TCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999888999999988777766555443

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=99.85  E-value=8.3e-21  Score=151.40  Aligned_cols=176  Identities=15%  Similarity=0.126  Sum_probs=138.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCC------------------cccCCHHHHhccCCEEEEecCChH----
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA------------------NMALSLSTLASGAEFIISMLPASQ----   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~------------------~~~~~~~~~~~~adiVi~~vp~~~----   58 (183)
                      ||..+|..|++ |++|++|||++++++.+.+.+.                  ..++++.+.++++|+||+|+|.+.    
T Consensus        11 vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvviiavpt~~~~~~   89 (402)
T 1dlj_A           11 VGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVIIATPTNYNSRI   89 (402)
T ss_dssp             HHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEECCCCCEETTT
T ss_pred             HHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEEecCCCcccCC
Confidence            79999999999 9999999999999998876653                  234567788889999999999974    


Q ss_pred             ------HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhc---CceEEEecCC
Q psy755           59 ------DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQE---ATLTFMVGGD  129 (183)
Q Consensus        59 ------~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~g~  129 (183)
                            .++.++   +++.+ ++++++|++.|+..+.+.+.+.+.+.+.  .++.+|.+..+..+..   ..-.++.|++
T Consensus        90 ~~~dl~~v~~v~---~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~G~a~~~~~~~~riviG~~  163 (402)
T 1dlj_A           90 NYFDTQHVETVI---KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRESKALYDNLYPSRIIVSCE  163 (402)
T ss_dssp             TEECCHHHHHHH---HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCTTSTTHHHHSCSCEEEECC
T ss_pred             CCccHHHHHHHH---HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccCcchhhcccCCCEEEEeCC
Confidence                  577777   78888 8899999999999999988888776543  5667777665433221   1112556665


Q ss_pred             H-------HHHHHHHHHHHHhcCC---eEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          130 K-------SSLEKAKPILKCMGRN---IVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       130 ~-------~~~~~~~~l~~~~g~~---~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      +       +..+.+.+++..-+.+   ++++++.+++++.|++.|.+.++++++++|+..+|++
T Consensus       164 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~  227 (402)
T 1dlj_A          164 ENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAES  227 (402)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5       5556777888754332   5778889999999999999999999999999999864

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=99.83  E-value=5.9e-21  Score=145.82  Aligned_cols=158  Identities=13%  Similarity=0.190  Sum_probs=119.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-------CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-------GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||.+||..|+ +|++|++||+++++++++.+.       ++..++++.+ +++||+||.++|.+.+++..+|  .++.+.
T Consensus        23 MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~~l~--~~l~~~   98 (293)
T 1zej_A           23 MGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKVEVL--REVERL   98 (293)
T ss_dssp             HHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHHHHHH--HHHHTT
T ss_pred             HHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHHHHH--HHHhcC
Confidence            8999999999 999999999999999988876       6666777776 8899999999999999988886  445544


Q ss_pred             CCCCcEEE-eccCCCchhHHHHHHHHH-hcCCcEEeecccCCHHHHhcCceEEEecC---CHHHHHHHHHHHHHhcCCeE
Q psy755           74 AKPGVIVI-DSSTVDPQVPQTLSNLAR-EKQITFLDAPVSGGTKAAQEATLTFMVGG---DKSSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        74 l~~~~iii-d~s~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~l~~~~g~~~~  148 (183)
                        ++++++ |+|+..+........... ..|.||++ |+..       ++++.++.+   +++.++.++++++.+|++++
T Consensus        99 --~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~-Pv~~-------~~lveiv~g~~t~~~~~~~~~~l~~~lGk~~v  168 (293)
T 1zej_A           99 --TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMN-PPHV-------MPLVEIVISRFTDSKTVAFVEGFLRELGKEVV  168 (293)
T ss_dssp             --CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECS-STTT-------CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred             --CCCEEEEECCCcCHHHHHHHhhcccceEeEEecC-cccc-------CCEEEEECCCCCCHHHHHHHHHHHHHcCCeEE
Confidence              888885 566666654433222111 23777777 4332       334555544   89999999999999999999


Q ss_pred             EeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          149 HCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       149 ~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      ++++.      +++++++.    ..++|++.+++
T Consensus       169 ~v~d~------fi~Nrll~----~~~~EA~~l~~  192 (293)
T 1zej_A          169 VCKGQ------SLVNRFNA----AVLSEASRMIE  192 (293)
T ss_dssp             EEESS------CHHHHHHH----HHHHHHHHHHH
T ss_pred             Eeccc------ccHHHHHH----HHHHHHHHHHH
Confidence            99864      77777765    45788877764

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=99.82  E-value=7.1e-19  Score=133.92  Aligned_cols=170  Identities=18%  Similarity=0.270  Sum_probs=135.9

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHcCCc--ccCCHHHHhc-cCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKEGAN--MALSLSTLAS-GAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~-~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||.++|..|.+.|+  +|++|||++++.+.+.+.|..  ..+++.+.++ ++|+||+++|.. ....++   +++.+.++
T Consensus        12 mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~-~~~~v~---~~l~~~l~   87 (281)
T 2g5c_A           12 MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR-TFREIA---KKLSYILS   87 (281)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH-HHHHHH---HHHHHHSC
T ss_pred             HHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH-HHHHHH---HHHHhhCC
Confidence            79999999999999  999999999998888777764  3557888888 999999999875 566776   77888889


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccC----CHHHHh----cCceEEEe---cCCHHHHHHHHHHHHHh
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSG----GTKAAQ----EATLTFMV---GGDKSSLEKAKPILKCM  143 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~----~~~~~~----~~~~~~~~---~g~~~~~~~~~~l~~~~  143 (183)
                      ++++|+++++.++.....+.+.+...   +++ +|+++    +|..+.    .+..++++   +++++..+.++++|+.+
T Consensus        88 ~~~iv~~~~~~~~~~~~~l~~~l~~~---~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~  164 (281)
T 2g5c_A           88 EDATVTDQGSVKGKLVYDLENILGKR---FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDV  164 (281)
T ss_dssp             TTCEEEECCSCCTHHHHHHHHHHGGG---EECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHT
T ss_pred             CCcEEEECCCCcHHHHHHHHHhcccc---ceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHHHHHHHc
Confidence            99999999998887777777776542   665 67775    334332    45556666   57888999999999999


Q ss_pred             cCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          144 GRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       144 g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      |.+++++++...+.++|++.|........++...
T Consensus       165 g~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~  198 (281)
T 2g5c_A          165 GGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTL  198 (281)
T ss_dssp             TCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             CCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988889999999988877655554433

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=99.81  E-value=2.3e-19  Score=139.85  Aligned_cols=167  Identities=14%  Similarity=0.227  Sum_probs=134.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhc----cCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS----GAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||++||+.|.+.|++|++|||++++.+.+.+.|+...+++.++++    ++|+||+++|. ..+..++   +++.+. ++
T Consensus        19 mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl---~~l~~~-~~   93 (341)
T 3ktd_A           19 IGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL---DAVHTH-AP   93 (341)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH---HHHHHH-CT
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH---HHHHcc-CC
Confidence            799999999999999999999999999988889877778888765    47999999996 5677887   778775 78


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCH-HHHh-------cCceEEEecC---CHH--------HHHHH
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGT-KAAQ-------EATLTFMVGG---DKS--------SLEKA  136 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~-~~~~-------~~~~~~~~~g---~~~--------~~~~~  136 (183)
                      +++|+|++++++.....+.+.+.  +.+|++ |||+|+. +...       .+..++++.+   +++        .++.+
T Consensus        94 ~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v  171 (341)
T 3ktd_A           94 NNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDV  171 (341)
T ss_dssp             TCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHH
T ss_pred             CCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHHHH
Confidence            99999999999887777766542  468888 8999864 2221       2445667654   445        78999


Q ss_pred             HHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHH
Q psy755          137 KPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGV  174 (183)
Q Consensus       137 ~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~  174 (183)
                      +++|+.+|.+++++++.....++..++..-..+..+..
T Consensus       172 ~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~aL~  209 (341)
T 3ktd_A          172 VQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLA  209 (341)
T ss_dssp             HHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            99999999999999998888888888877776655443

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=99.81  E-value=1.6e-19  Score=141.74  Aligned_cols=178  Identities=13%  Similarity=0.112  Sum_probs=135.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC--------------CcccCCHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG--------------ANMALSLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||.++|..|+++|++|++|+|++++++.+.+.+              +..++++.++++++|+||++||. +.++.++  
T Consensus        40 mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaVp~-~~~~~vl--  116 (356)
T 3k96_A           40 WGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPS-FAFHEVI--  116 (356)
T ss_dssp             HHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECCCH-HHHHHHH--
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECCCH-HHHHHHH--
Confidence            799999999999999999999999998887754              23356888889999999999987 5788888  


Q ss_pred             CccccccCCCCcEEEeccCCCchhH----HHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHH
Q psy755           67 SDGILKHAKPGVIVIDSSTVDPQVP----QTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKC  142 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~  142 (183)
                       +++.+.++++++|+++++......    +.+.+.+......++..|.+........+...++.+.+++..+.++++|+.
T Consensus       117 -~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via~~~~~~~~~v~~lf~~  195 (356)
T 3k96_A          117 -TRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHG  195 (356)
T ss_dssp             -HHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEEESCHHHHHHHHHHHCC
T ss_pred             -HHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEecCCHHHHHHHHHHhCC
Confidence             889999999999999987544321    233333332344566677766555444555556667788999999999999


Q ss_pred             hcCCeEEeCCcchHHHHH-----------------HHHHHHHHHHHHHHHHHHhccc
Q psy755          143 MGRNIVHCGDSGNGQVAK-----------------LCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       143 ~g~~~~~~g~~g~a~~~k-----------------~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      .+.++++..+.-..++.|                 +..|........+++|+..+|+
T Consensus       196 ~~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~  252 (356)
T 3k96_A          196 QRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVS  252 (356)
T ss_dssp             SSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHH
Confidence            999998888865555554                 4455566667788888888775

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=99.80  E-value=1.1e-19  Score=138.87  Aligned_cols=171  Identities=15%  Similarity=0.209  Sum_probs=135.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.++|..|.+.|++|++|||++++.+.+.+.|+... ++.+.++++|+||+++|+.. ++.++   +++.+.++++++|
T Consensus        23 mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~~-~~~v~---~~l~~~l~~~~iv   97 (286)
T 3c24_A           23 MGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDNI-IEKVA---EDIVPRVRPGTIV   97 (286)
T ss_dssp             HHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHHH-HHHHH---HHHGGGSCTTCEE
T ss_pred             HHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCchH-HHHHH---HHHHHhCCCCCEE
Confidence            7999999999999999999999999888877775544 67788899999999998754 78887   7888889899999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEE-eecccCCH------HHHhcCc-------eEEE--ecCCHHHHHHHHHHHHHhc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFL-DAPVSGGT------KAAQEAT-------LTFM--VGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~------~~~~~~~-------~~~~--~~g~~~~~~~~~~l~~~~g  144 (183)
                      +|+|+..+...  +.+ . ..+.+|+ .+|++++.      .....+.       ..+.  .+++++..+.++++|+.+|
T Consensus        98 v~~s~~~~~~~--l~~-~-~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G  173 (286)
T 3c24_A           98 LILDAAAPYAG--VMP-E-RADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGADICETMW  173 (286)
T ss_dssp             EESCSHHHHHT--CSC-C-CTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHHHHHHHHT
T ss_pred             EECCCCchhHH--HHh-h-hCCCeEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHHHHHHHHHhc
Confidence            99887654322  222 1 2367888 79999876      4445552       2232  4578899999999999999


Q ss_pred             C---CeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy755          145 R---NIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNL  180 (183)
Q Consensus       145 ~---~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~  180 (183)
                      .   +++++++.+.+.+.|.+.|.....++..++|++..
T Consensus       174 ~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~  212 (286)
T 3c24_A          174 SPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDE  212 (286)
T ss_dssp             CSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHH
T ss_pred             CCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9   88999987777777999988888888888887654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=99.78  E-value=4e-19  Score=134.26  Aligned_cols=169  Identities=15%  Similarity=0.231  Sum_probs=125.4

Q ss_pred             CcHHHHHHHHhCCCc-EEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHD-VIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~-V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||..++..|.+.|++ |.+|||++++.+++.+. |+...+++.++++++|+||+++|+. .++.++   +++.+.+++++
T Consensus        21 mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~-~~~~v~---~~l~~~~~~~~   96 (266)
T 3d1l_A           21 LATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS-AFAELL---QGIVEGKREEA   96 (266)
T ss_dssp             HHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH-HHHHHH---HHHHTTCCTTC
T ss_pred             HHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH-HHHHHH---HHHHhhcCCCc
Confidence            789999999999998 89999999999888776 7777778888889999999999986 567777   77888888999


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEE-ecCCHHHHHHHHHHHHHhcCCeEEeCCcc---
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFM-VGGDKSSLEKAKPILKCMGRNIVHCGDSG---  154 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~l~~~~g~~~~~~g~~g---  154 (183)
                      +|+++++..+...  +.+.+...+..+..+|+.+.+.. ..+...++ .+++++.++.++++++.+|.+++++++.+   
T Consensus        97 ivv~~s~~~~~~~--l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~  173 (266)
T 3d1l_A           97 LMVHTAGSIPMNV--WEGHVPHYGVFYPMQTFSKQREV-DFKEIPFFIEASSTEDAAFLKAIASTLSNRVYDADSEQRKS  173 (266)
T ss_dssp             EEEECCTTSCGGG--STTTCSSEEEEEECCCC---CCC-CCTTCCEEEEESSHHHHHHHHHHHHTTCSCEEECCHHHHHH
T ss_pred             EEEECCCCCchHH--HHHHHHhccCcCCceecCCCchh-hcCCCeEEEecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHH
Confidence            9999999888653  33333322333444565553321 12233344 47888999999999999999999999765   


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHH
Q psy755          155 NGQVAKLCNNMLLGVTMMGVAEAM  178 (183)
Q Consensus       155 ~a~~~k~~~~~~~~~~~~~~~E~~  178 (183)
                      ...+.|+++|..  .++..++|++
T Consensus       174 ~~~~~~l~~~~~--~~~~~~~eal  195 (266)
T 3d1l_A          174 LHLAAVFTCNFT--NHMYALAAEL  195 (266)
T ss_dssp             HHHHHHHHHHHH--HHHHHHHHHH
T ss_pred             HHHHHHHHHHHH--HHHHHHHHHH
Confidence            457789998884  3345555543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=99.77  E-value=4.9e-18  Score=124.13  Aligned_cols=163  Identities=14%  Similarity=0.239  Sum_probs=126.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-C-------CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-G-------ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g-------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||..++..|.+.|++|++|+|++++.+.+.+. +       +. .+++.++++++|+||+++|. ...+.++   +++.+
T Consensus        12 ~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~-~~~~~~~---~~l~~   86 (212)
T 1jay_A           12 LGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPW-EHAIDTA---RDLKN   86 (212)
T ss_dssp             HHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCH-HHHHHHH---HHTHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCCh-hhHHHHH---HHHHH
Confidence            68999999999999999999999988776543 2       22 35677888999999999986 5567776   67777


Q ss_pred             cCCCCcEEEeccCCCc------------hhHHHHHHHHHhcCCcEEee--cccCCHHHH--hcCceEEEecCC-HHHHHH
Q psy755           73 HAKPGVIVIDSSTVDP------------QVPQTLSNLAREKQITFLDA--PVSGGTKAA--QEATLTFMVGGD-KSSLEK  135 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~------------~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~--~~~~~~~~~~g~-~~~~~~  135 (183)
                      .+ ++++++|+++...            ...+.+.+.++  +.+++.+  |+.+.....  ..+..+++++++ ++..+.
T Consensus        87 ~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  163 (212)
T 1jay_A           87 IL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE--SEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKV  163 (212)
T ss_dssp             HH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT--CSCEEECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHH
T ss_pred             Hc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC--CCeEEEEccchHHHHhhCcCCCCCccEEEECCcHHHHHH
Confidence            67 5899999998543            22556666654  4677775  444433322  445567777775 888999


Q ss_pred             HHHHHHHh-cCCeEEeCCcchHHHHHHHHHHHHHHHH
Q psy755          136 AKPILKCM-GRNIVHCGDSGNGQVAKLCNNMLLGVTM  171 (183)
Q Consensus       136 ~~~l~~~~-g~~~~~~g~~g~a~~~k~~~~~~~~~~~  171 (183)
                      ++++|+.+ |.+++++++.+.+.++|++.|.+.....
T Consensus       164 v~~l~~~~~G~~~~~~~~~~~a~~~k~~~~~~~~~~~  200 (212)
T 1jay_A          164 VMSLISEIDGLRPLDAGPLSNSRLVESLTPLILNIMR  200 (212)
T ss_dssp             HHHHHHHSTTEEEEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCceeccchhHHHHhcchHHHHHHHHH
Confidence            99999999 9999999999999999999999988765

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=99.75  E-value=3e-17  Score=124.70  Aligned_cols=162  Identities=22%  Similarity=0.356  Sum_probs=126.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc--ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN--MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.+++..|.+.|++|++|||++++.+.+.+.|..  ..+++.++ .++|+||+++|+ ..+..++   +++.+.+++++
T Consensus        11 ~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~-~~~~~~~---~~l~~~~~~~~   85 (279)
T 2f1k_A           11 IGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPI-QLILPTL---EKLIPHLSPTA   85 (279)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCH-HHHHHHH---HHHGGGSCTTC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCH-HHHHHHH---HHHHhhCCCCC
Confidence            79999999999999999999999999888777763  45678887 899999999986 5677777   78888898999


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccC----CHHHHh----cCceEEEec---CCHHHHHHHHHHHHHhcCC
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSG----GTKAAQ----EATLTFMVG---GDKSSLEKAKPILKCMGRN  146 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~----~~~~~~----~~~~~~~~~---g~~~~~~~~~~l~~~~g~~  146 (183)
                      +|+|+++.++.....+.+.+.    +++. +|+.+    ++..+.    .+..++++.   ++++..+.++++|+.+|.+
T Consensus        86 ~vv~~~~~~~~~~~~~~~~~~----~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~  161 (279)
T 2f1k_A           86 IVTDVASVKTAIAEPASQLWS----GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVK  161 (279)
T ss_dssp             EEEECCSCCHHHHHHHHHHST----TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCE
T ss_pred             EEEECCCCcHHHHHHHHHHhC----CEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHHcCCE
Confidence            999998877766555544322    5565 57764    333322    344455543   4788889999999999999


Q ss_pred             eEEeCCcchHHHHHHHHHHHHHHHH
Q psy755          147 IVHCGDSGNGQVAKLCNNMLLGVTM  171 (183)
Q Consensus       147 ~~~~g~~g~a~~~k~~~~~~~~~~~  171 (183)
                      ++++++.....+.|++.|.......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~p~~i~~  186 (279)
T 2f1k_A          162 IYLCTPADHDQAVAWISHLPVMVSA  186 (279)
T ss_dssp             EEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             EEEcCHHHHHHHHHHHhhHHHHHHH
Confidence            9999988889999999997555544

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=99.75  E-value=2.9e-18  Score=137.12  Aligned_cols=179  Identities=17%  Similarity=0.156  Sum_probs=133.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--------------------CCcccCCHHHHhccCCEEEEecCChH--
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--------------------GANMALSLSTLASGAEFIISMLPASQ--   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--------------------g~~~~~~~~~~~~~adiVi~~vp~~~--   58 (183)
                      +|..+|..|++.||+|+++|.|+++++.+.+.                    ....+++..+++++||++|+|||.|.  
T Consensus        32 VGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~~~I~VpTP~~~  111 (444)
T 3vtf_A           32 VGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDATFIAVGTPPAP  111 (444)
T ss_dssp             HHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSEEEECCCCCBCT
T ss_pred             HHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCceEEEecCCCCC
Confidence            58899999999999999999999998876542                    13456678888999999999998752  


Q ss_pred             -------HHHHHhcCCccccccCC---CCcEEEeccCCCchhHHHHHHHH-Hhc--C--CcEEeecccCCHHHH----hc
Q psy755           59 -------DVLDAYDGSDGILKHAK---PGVIVIDSSTVDPQVPQTLSNLA-REK--Q--ITFLDAPVSGGTKAA----QE  119 (183)
Q Consensus        59 -------~~~~v~~~~~~l~~~l~---~~~iiid~s~~~~~~~~~~~~~~-~~~--g--~~~~~~~~~~~~~~~----~~  119 (183)
                             .+..+.   +.+.+.++   ++++||..||+.|.+.+.+...+ .+.  |  +....+|-+-.+-.+    ..
T Consensus       112 d~~~Dl~~v~~a~---~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~PErl~eG~a~~d~~~  188 (444)
T 3vtf_A          112 DGSADLRYVEAAA---RAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASNPEFLREGSALEDFFK  188 (444)
T ss_dssp             TSSBCCHHHHHHH---HHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEECCCCCCTTSHHHHHHS
T ss_pred             CCCCCcHHHHHHH---HHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecCcccccCCcccccccc
Confidence                   344554   66777664   68899999999999987765443 332  2  334445644322111    12


Q ss_pred             CceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcccC
Q psy755          120 ATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK  183 (183)
Q Consensus       120 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~~  183 (183)
                      ..-+++.+.++++.+.+.++++.+....+++ +...|++.|++.|.+++++++++||+..+|++
T Consensus       189 ~~riViG~~~~~a~~~~~~ly~~~~~~~~~~-~~~~AE~~Kl~eN~~ravnIa~~NEla~ice~  251 (444)
T 3vtf_A          189 PDRIVIGAGDERAASFLLDVYKAVDAPKLVM-KPREAELVKYASNVFLALKISFANEVGLLAKR  251 (444)
T ss_dssp             CSCEEEEESSHHHHHHHHHHTTTSCSCEEEE-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEcCCCHHHHHHHHHHHhccCCCEEEe-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3323444567788888999999887766554 56789999999999999999999999999874

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=99.74  E-value=2.1e-17  Score=126.33  Aligned_cols=149  Identities=16%  Similarity=0.306  Sum_probs=116.2

Q ss_pred             CcHHHHHHHHhC--CCcEEEEcCCchhHHHHHHcCCc--ccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc-CC
Q psy755            1 MGSHMARNLLKN--GHDVIVYDKNTDASQTLAKEGAN--MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH-AK   75 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~-l~   75 (183)
                      ||.++|..|.+.  |++|++|||++++.+.+.+.|..  ...++.++++++|+||+++|+.. .+.++   +++.+. ++
T Consensus        17 mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~---~~l~~~~l~   92 (290)
T 3b1f_A           17 IGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFI---KILADLDLK   92 (290)
T ss_dssp             HHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHH---HHHHTSCCC
T ss_pred             HHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHH---HHHHhcCCC
Confidence            799999999987  67999999999999888777763  45677788899999999998754 57777   778888 88


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccC----CHHHHh----cCceEEEe---cCCHHHHHHHHHHHHHh
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSG----GTKAAQ----EATLTFMV---GGDKSSLEKAKPILKCM  143 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~----~~~~~~----~~~~~~~~---~g~~~~~~~~~~l~~~~  143 (183)
                      ++++|+|+++.++.....+.+.+...+.+++. +|+++    ++..+.    .+..++++   +++++..+.++++|+.+
T Consensus        93 ~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~  172 (290)
T 3b1f_A           93 EDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPALQDLLSGL  172 (290)
T ss_dssp             TTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGG
T ss_pred             CCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHc
Confidence            99999999988887777777766655778887 78876    333222    45444444   36778899999999999


Q ss_pred             cCCeEEeCCc
Q psy755          144 GRNIVHCGDS  153 (183)
Q Consensus       144 g~~~~~~g~~  153 (183)
                      |.+++++++.
T Consensus       173 G~~~~~~~~~  182 (290)
T 3b1f_A          173 HARYVEIDAA  182 (290)
T ss_dssp             CCEEEECCHH
T ss_pred             CCEEEEcCHH
Confidence            9988888753

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=99.74  E-value=7e-17  Score=123.99  Aligned_cols=154  Identities=14%  Similarity=0.184  Sum_probs=121.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.++|..|.+.|++|++|||+++.             ++.+.+.+||+||+|||.. .+..++   +++.+.++++++|
T Consensus        33 mG~~la~~l~~~G~~V~~~~~~~~~-------------~~~~~~~~aDvVilavp~~-~~~~vl---~~l~~~l~~~~iv   95 (298)
T 2pv7_A           33 LGGLFARYLRASGYPISILDREDWA-------------VAESILANADVVIVSVPIN-LTLETI---ERLKPYLTENMLL   95 (298)
T ss_dssp             HHHHHHHHHHTTTCCEEEECTTCGG-------------GHHHHHTTCSEEEECSCGG-GHHHHH---HHHGGGCCTTSEE
T ss_pred             HHHHHHHHHHhCCCeEEEEECCccc-------------CHHHHhcCCCEEEEeCCHH-HHHHHH---HHHHhhcCCCcEE
Confidence            7899999999999999999998862             5667889999999999885 478887   7888889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEecC-CHHHHHHHHHHHHHhcCCeEEeCCcchHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMVGG-DKSSLEKAKPILKCMGRNIVHCGDSGNGQV  158 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~  158 (183)
                      +|+++.+......+.+.   .+.+++. +|+++.......+..++++.+ +++..+.++++|+.+|.+++++++.....+
T Consensus        96 ~~~~svk~~~~~~~~~~---~~~~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~~~~~~~~~~d~~  172 (298)
T 2pv7_A           96 ADLTSVKREPLAKMLEV---HTGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQIQIWGAKIYQTNATEHDHN  172 (298)
T ss_dssp             EECCSCCHHHHHHHHHH---CSSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred             EECCCCCcHHHHHHHHh---cCCCEEeeCCCCCCCchhhcCCeEEEecCCCHHHHHHHHHHHHHcCCEEEECCHHHHHHH
Confidence            99998887666555443   2456776 688875543334555555543 678889999999999999999998777889


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy755          159 AKLCNNMLLGVTMMGV  174 (183)
Q Consensus       159 ~k~~~~~~~~~~~~~~  174 (183)
                      ++.+.+......+.++
T Consensus       173 ~a~~~~~p~~~a~~l~  188 (298)
T 2pv7_A          173 MTYIQALRHFSTFANG  188 (298)
T ss_dssp             HHHHTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999888776554444

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=99.74  E-value=3.7e-18  Score=131.51  Aligned_cols=177  Identities=18%  Similarity=0.172  Sum_probs=126.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc------------CCHHHHhc---cCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA------------LSLSTLAS---GAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~------------~~~~~~~~---~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||..+|..|++.|++|++|||++++.+.+.+.|....            .+..+..+   ++|+||+++|. ..++.++ 
T Consensus        14 ~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~-~~~~~v~-   91 (316)
T 2ew2_A           14 MGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTKA-QQLDAMF-   91 (316)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSCH-HHHHHHH-
T ss_pred             HHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEecc-ccHHHHH-
Confidence            7999999999999999999999999988887663321            13344444   89999999986 5678887 


Q ss_pred             CCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccC--CHHHHhcCceEEEe--cCCHHHHHHHH
Q psy755           66 GSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSG--GTKAAQEATLTFMV--GGDKSSLEKAK  137 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~--~~~~~~~~~~~~~~--~g~~~~~~~~~  137 (183)
                        +++.+.++++++|+++++..+ ....+.+.+.+.    |..+..++..+  .+.....+...+..  +++++..+.++
T Consensus        92 --~~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~  168 (316)
T 2ew2_A           92 --KAIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPSGKKFALEVV  168 (316)
T ss_dssp             --HHHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESSGGGHHHHHHHH
T ss_pred             --HHHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCCCccHHHHHHH
Confidence              788899999999999987654 233444444332    11112222222  11122345545542  45678889999


Q ss_pred             HHHHHhcCCeEEeCCcchHHHHHHHHHHHH---------------------HHHHHHHHHHHhccc
Q psy755          138 PILKCMGRNIVHCGDSGNGQVAKLCNNMLL---------------------GVTMMGVAEAMNLGV  182 (183)
Q Consensus       138 ~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~---------------------~~~~~~~~E~~~~~~  182 (183)
                      ++|+.+|.++++.++.+.+.+.|++.|...                     ......+.|++.+++
T Consensus       169 ~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~  234 (316)
T 2ew2_A          169 DVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAE  234 (316)
T ss_dssp             HHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence            999999999988899999999999999642                     455678888887765

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=99.72  E-value=2.7e-17  Score=121.12  Aligned_cols=152  Identities=16%  Similarity=0.236  Sum_probs=112.1

Q ss_pred             CcHHHHHHHHhCCCcEEE-EcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIV-YDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~-~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.++|..|.+.|++|++ |||++++.+++.+. |.....+..+.++++|+||+++|. +.+..++   +++.+ + +++
T Consensus        34 mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~---~~l~~-~-~~~  107 (220)
T 4huj_A           34 IGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIV---TQVSD-W-GGQ  107 (220)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHH---TTCSC-C-TTC
T ss_pred             HHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHH---HHhhc-c-CCC
Confidence            799999999999999999 99999999887654 666555666778999999999986 6677877   67776 5 689


Q ss_pred             EEEeccCCCc------------hhHHHHHHHHHhcCCcEEe------ecccC-CHHHHhcCceEEEecCCHHHHHHHHHH
Q psy755           79 IVIDSSTVDP------------QVPQTLSNLAREKQITFLD------APVSG-GTKAAQEATLTFMVGGDKSSLEKAKPI  139 (183)
Q Consensus        79 iiid~s~~~~------------~~~~~~~~~~~~~g~~~~~------~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~l  139 (183)
                      +|+|+++..+            ...+.+.+.++.  .+++.      .++.. ++.....+..+++.+.++++.+.++++
T Consensus       108 ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~--~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~~~~~~~~v~~l  185 (220)
T 4huj_A          108 IVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPG--AKVVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQVAEL  185 (220)
T ss_dssp             EEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTT--CEEEEESCSSCHHHHTSCSBCSSCEEEEEEEESCHHHHHHHHHH
T ss_pred             EEEEcCCCCCcccccccccCCCcHHHHHHHHCCC--CCEEECCCCCCHHHhhhCcccCCCCeeEEEeCCCHHHHHHHHHH
Confidence            9999998763            145555555542  23332      22222 222111233345566788999999999


Q ss_pred             HHHhcCCeEEeCCcchHHHHH
Q psy755          140 LKCMGRNIVHCGDSGNGQVAK  160 (183)
Q Consensus       140 ~~~~g~~~~~~g~~g~a~~~k  160 (183)
                      ++.+|.+++++|+++.|..++
T Consensus       186 ~~~~G~~~~~~G~l~~a~~~~  206 (220)
T 4huj_A          186 ISSLGFAPVDLGTLAASGPIQ  206 (220)
T ss_dssp             HHHTTCEEEECCSHHHHHHHH
T ss_pred             HHHhCCCeEeeCChhhcchhh
Confidence            999999999999999887664

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=99.72  E-value=8.7e-17  Score=122.62  Aligned_cols=166  Identities=20%  Similarity=0.203  Sum_probs=116.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-----------C--------------CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-----------G--------------ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-----------g--------------~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      ||.+||..|+++|++|++||+++++++++.+.           +              +...+++.+++++||+||+++|
T Consensus        15 mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlVi~av~   94 (283)
T 4e12_A           15 LGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVKDADLVIEAVP   94 (283)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTTTCSEEEECCC
T ss_pred             HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhccCCEEEEecc
Confidence            79999999999999999999999988776543           1              3556788888999999999999


Q ss_pred             ChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEecC---CHH
Q psy755           56 ASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMVGG---DKS  131 (183)
Q Consensus        56 ~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g---~~~  131 (183)
                      ...+.+..++  +++.+.+++++++++.+++.+..  .+.+.+. +..+++. ++..    +....+.+.++.+   +++
T Consensus        95 ~~~~~~~~v~--~~l~~~~~~~~il~s~tS~~~~~--~la~~~~-~~~~~ig~h~~~----p~~~~~lvevv~~~~t~~~  165 (283)
T 4e12_A           95 ESLDLKRDIY--TKLGELAPAKTIFATNSSTLLPS--DLVGYTG-RGDKFLALHFAN----HVWVNNTAEVMGTTKTDPE  165 (283)
T ss_dssp             SCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHH--HHHHHHS-CGGGEEEEEECS----STTTSCEEEEEECTTSCHH
T ss_pred             CcHHHHHHHH--HHHHhhCCCCcEEEECCCCCCHH--HHHhhcC-CCcceEEEccCC----CcccCceEEEEeCCCCCHH
Confidence            8755555443  77888899999999877776543  3344332 2223444 2222    1223444555554   789


Q ss_pred             HHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          132 SLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      .++.++++++.+|+.++++++.+.+..+   ++.+.    ..++|++.+.+
T Consensus       166 ~~~~~~~l~~~~g~~~v~v~~~~~g~i~---nr~~~----~~~~ea~~l~~  209 (283)
T 4e12_A          166 VYQQVVEFASAIGMVPIELKKEKAGYVL---NSLLV----PLLDAAAELLV  209 (283)
T ss_dssp             HHHHHHHHHHHTTCEEEECSSCCTTTTH---HHHHH----HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEecCCCCEEe---hHHHH----HHHHHHHHHHH
Confidence            9999999999999999999655556544   43333    24566665543

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=99.72  E-value=2.4e-16  Score=122.30  Aligned_cols=141  Identities=11%  Similarity=0.124  Sum_probs=108.8

Q ss_pred             CcHHHHHHHHhCC----CcEEEEcCCch--hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKNG----HDVIVYDKNTD--ASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g----~~V~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||.+||.+|.+.|    ++|++|||+++  +.+.+.+.|+...+++.++++++|+||+||| ++.++.++   +++.+.+
T Consensus        33 mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~vl---~~l~~~l  108 (322)
T 2izz_A           33 LAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPFIL---DEIGADI  108 (322)
T ss_dssp             HHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHHHH---HHHGGGC
T ss_pred             HHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHHHH---HHHHhhc
Confidence            7999999999999    89999999986  7888877788888889999999999999998 47788887   7888888


Q ss_pred             CCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEecCC---HHHHHHHHHHHHHhcCCeEE
Q psy755           75 KPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMVGGD---KSSLEKAKPILKCMGRNIVH  149 (183)
Q Consensus        75 ~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~l~~~~g~~~~~  149 (183)
                      +++++|+++++..+..  .+.+.+.+.  +.+++. .+...+.....+. .++++++   ++.++.++++|+.+|..+++
T Consensus       109 ~~~~ivvs~s~gi~~~--~l~~~l~~~~~~~~vv~-~~p~~p~~~~~g~-~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~  184 (322)
T 2izz_A          109 EDRHIVVSCAAGVTIS--SIEKKLSAFRPAPRVIR-CMTNTPVVVREGA-TVYATGTHAQVEDGRLMEQLLSSVGFCTEV  184 (322)
T ss_dssp             CTTCEEEECCTTCCHH--HHHHHHHTTSSCCEEEE-EECCGGGGGTCEE-EEEEECTTCCHHHHHHHHHHHHTTEEEEEC
T ss_pred             CCCCEEEEeCCCCCHH--HHHHHHhhcCCCCeEEE-EeCCcHHHHcCCe-EEEEeCCCCCHHHHHHHHHHHHhCCCEEEe
Confidence            8999999998776543  455555543  334444 2333344444454 5666665   78889999999999986543

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=99.72  E-value=6.5e-16  Score=116.18  Aligned_cols=164  Identities=12%  Similarity=0.174  Sum_probs=119.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||..++..|.+.|++|.+|||++++.+.+.+. |+...+++.++++++|+||+++| +...+.++   +++    .++++
T Consensus        14 mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~v~---~~l----~~~~~   85 (259)
T 2ahr_A           14 MASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVL---KPL----HFKQP   85 (259)
T ss_dssp             HHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHH---TTS----CCCSC
T ss_pred             HHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHHHH---HHh----ccCCE
Confidence            78999999999999999999999998888765 87777889999999999999999 56677776   433    37889


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecC--CHHHHHHHHHHHHHhcCCeEEeCCcchHH
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGG--DKSSLEKAKPILKCMGRNIVHCGDSGNGQ  157 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~g~~~~~~g~~g~a~  157 (183)
                      +++.++..+..  .+.+.++ .+.+++. ++.+.+.....|...++.++  +++.++.++++|+.+| .++++++.....
T Consensus        86 vv~~~~~~~~~--~l~~~~~-~~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G-~~~~~~~~~~d~  160 (259)
T 2ahr_A           86 IISMAAGISLQ--RLATFVG-QDLPLLR-IMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFG-STFDISEKDFDT  160 (259)
T ss_dssp             EEECCTTCCHH--HHHHHHC-TTSCEEE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTE-EEEECCGGGHHH
T ss_pred             EEEeCCCCCHH--HHHHhcC-CCCCEEE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCC-CEEEecHHHccH
Confidence            99987554432  3444443 4556776 56666666666755555555  7888999999999999 588888766666


Q ss_pred             HHHHH--HHHHHHHHHHHHHHH
Q psy755          158 VAKLC--NNMLLGVTMMGVAEA  177 (183)
Q Consensus       158 ~~k~~--~~~~~~~~~~~~~E~  177 (183)
                      ++++.  .+.+....+..++|+
T Consensus       161 ~~al~g~~~~~~~~~~~~la~~  182 (259)
T 2ahr_A          161 FTALAGSSPAYIYLFIEALAKA  182 (259)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHH
T ss_pred             HHHHhccHHHHHHHHHHHHHHH
Confidence            66653  223333344444443

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=99.71  E-value=1.5e-17  Score=135.08  Aligned_cols=160  Identities=19%  Similarity=0.278  Sum_probs=114.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------cC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------EG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||.+||..|+++|++|++||+++++++++.+           .|             +...++++ .+++||+||+++|+
T Consensus        16 MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~aDlVIeAVpe   94 (483)
T 3mog_A           16 MGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-ALAAADLVIEAASE   94 (483)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GGGGCSEEEECCCC
T ss_pred             HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-HhcCCCEEEEcCCC
Confidence            8999999999999999999999998887654           22             22345554 57899999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh----cCCcEEe-ecccCCHHHHhcCceEEEecC---
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE----KQITFLD-APVSGGTKAAQEATLTFMVGG---  128 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~----~g~~~~~-~~~~~~~~~~~~~~~~~~~~g---  128 (183)
                      ...++..++  .++.+.+++++++++.+++.+.+  .+.+.+..    .|.||++ .|++         +++.++.+   
T Consensus        95 ~~~vk~~v~--~~l~~~~~~~~IlasntSti~i~--~ia~~~~~p~~~ig~hf~~Pa~v~---------~Lvevv~g~~T  161 (483)
T 3mog_A           95 RLEVKKALF--AQLAEVCPPQTLLTTNTSSISIT--AIAAEIKNPERVAGLHFFNPAPVM---------KLVEVVSGLAT  161 (483)
T ss_dssp             CHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHH--HHTTTSSSGGGEEEEEECSSTTTC---------CEEEEEECSSC
T ss_pred             cHHHHHHHH--HHHHHhhccCcEEEecCCCCCHH--HHHHHccCccceEEeeecChhhhC---------CeEEEecCCCC
Confidence            877765443  77888899999986544444333  22222211    1455555 2222         45666666   


Q ss_pred             CHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          129 DKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       129 ~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +++.++.+.++++.+|+.++++++.. +   +++++++..    .++|++.+++
T Consensus       162 s~e~~~~~~~l~~~lGk~~v~v~d~~-G---fi~Nr~l~~----~~~Ea~~l~~  207 (483)
T 3mog_A          162 AAEVVEQLCELTLSWGKQPVRCHSTP-G---FIVNRVARP----YYSEAWRALE  207 (483)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEESCT-T---TTHHHHTHH----HHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCEEEEEeccC-c---chHHHHHHH----HHHHHHHHHH
Confidence            88999999999999999999998732 3   666776665    5777777664

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=99.71  E-value=1.6e-16  Score=119.64  Aligned_cols=138  Identities=18%  Similarity=0.263  Sum_probs=109.4

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||..+|..|.+.| ++|++|||++++.+.+.+. |+....++.+++ ++|+||+++| +..++.++   +++.+  + ++
T Consensus        11 mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---~~l~~--~-~~   82 (263)
T 1yqg_A           11 MAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---KNIRT--N-GA   82 (263)
T ss_dssp             HHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH---TTCCC--T-TC
T ss_pred             HHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH---HHhcc--C-CC
Confidence            7999999999999 9999999999999988775 877777777878 9999999999 68888887   66665  5 89


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecC--CHHHHHHHHHHHHHhcCCeEEeC
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGG--DKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      +|+|+++..+.  ..+.+.++. +.+++.. +.+.+.....|...++.++  +++..+.++++|+.+|.++ +++
T Consensus        83 ivv~~~~g~~~--~~l~~~~~~-~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~~-~~~  152 (263)
T 1yqg_A           83 LVLSVAAGLSV--GTLSRYLGG-TRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTV-WLD  152 (263)
T ss_dssp             EEEECCTTCCH--HHHHHHTTS-CCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEEE-ECS
T ss_pred             EEEEecCCCCH--HHHHHHcCC-CCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEE-EeC
Confidence            99999655543  344554433 5678877 6666666666665666666  7888999999999999876 777

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=99.70  E-value=1e-16  Score=126.73  Aligned_cols=178  Identities=14%  Similarity=0.109  Sum_probs=125.5

Q ss_pred             CcHHHHHHHHhCC-------CcEEEEcCCch-----hHHHHHHcC--------------CcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNG-------HDVIVYDKNTD-----ASQTLAKEG--------------ANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g-------~~V~~~~~~~~-----~~~~~~~~g--------------~~~~~~~~~~~~~adiVi~~v   54 (183)
                      ||.+||..|+++|       ++|++|||+++     +.+.+.+.+              +..++++.++++++|+||++|
T Consensus        32 mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~~~aDvVilav  111 (375)
T 1yj8_A           32 WASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVINDADLLIFIV  111 (375)
T ss_dssp             HHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHHTTCSEEEECC
T ss_pred             HHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHHcCCCEEEEcC
Confidence            7999999999999       99999999998     887776532              234567778889999999999


Q ss_pred             CChHHHHHHhcCCccccc----cCCCCcEEEeccCCCch---hHHHHHHHHHhc-CC--cEEeecccCCHHHHhcCceEE
Q psy755           55 PASQDVLDAYDGSDGILK----HAKPGVIVIDSSTVDPQ---VPQTLSNLAREK-QI--TFLDAPVSGGTKAAQEATLTF  124 (183)
Q Consensus        55 p~~~~~~~v~~~~~~l~~----~l~~~~iiid~s~~~~~---~~~~~~~~~~~~-g~--~~~~~~~~~~~~~~~~~~~~~  124 (183)
                      |+ +.++.++   +++.+    .++++++|++++++...   ....+.+.+.+. +.  .+...|-.............+
T Consensus       112 ~~-~~~~~vl---~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~a~~v~~g~~~~~~  187 (375)
T 1yj8_A          112 PC-QYLESVL---ASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIPCSALSGANIAMDVAMENFSEAT  187 (375)
T ss_dssp             CH-HHHHHHH---HHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSCEEEEECSCCHHHHHTTCCEEEE
T ss_pred             CH-HHHHHHH---HHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCCEEEEeCCchHHHHHhCCCeEEE
Confidence            86 7788887   78888    88899999999865432   122233333332 21  122222221111111233344


Q ss_pred             EecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHH-----------------HHHHHHHHHHHHHHHHhccc
Q psy755          125 MVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLC-----------------NNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       125 ~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~-----------------~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +.+++++..+.++++|+..|.++++.++.-...+.|.+                 .|.+......++.|+..+++
T Consensus       188 ~~~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~~~la~  262 (375)
T 1yj8_A          188 IGGNDKDSLVIWQRVFDLPYFKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRNGINEMILFGK  262 (375)
T ss_dssp             EECSCHHHHHHHHHHHCBTTEEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHH
Confidence            55678888899999999999988888887666666554                 45577777889999988875

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=99.69  E-value=3.8e-16  Score=121.39  Aligned_cols=177  Identities=16%  Similarity=0.134  Sum_probs=126.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcC--CchhHHHHHHcCC-----------cccC--CHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDK--NTDASQTLAKEGA-----------NMAL--SLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~--~~~~~~~~~~~g~-----------~~~~--~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||..+|..|++.|++|++|||  ++++.+.+.+.+.           ...+  ++.+.++++|+||+++|.. .++.++ 
T Consensus        11 mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~-~~~~v~-   88 (335)
T 1txg_A           11 MGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVSTD-GVLPVM-   88 (335)
T ss_dssp             HHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCGG-GHHHHH-
T ss_pred             HHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCChH-HHHHHH-
Confidence            799999999999999999999  9999888887653           2344  6677788999999999885 677777 


Q ss_pred             CCccccccCCCCcEEEeccCCC----chhHHHHHHHHHhc-CC-c-EEeecccCCHHHHhcCc--eEEEecCCHHHHHHH
Q psy755           66 GSDGILKHAKPGVIVIDSSTVD----PQVPQTLSNLAREK-QI-T-FLDAPVSGGTKAAQEAT--LTFMVGGDKSSLEKA  136 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~~~----~~~~~~~~~~~~~~-g~-~-~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~  136 (183)
                        +++.+ ++++++|++++++.    |...+.+.+.+.+. |. + .......+.......+.  ..++.+.+++..+.+
T Consensus        89 --~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~  165 (335)
T 1txg_A           89 --SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREVAKRMPTTVVFSSPSESSANKM  165 (335)
T ss_dssp             --HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHHHTTCCEEEEEECSCHHHHHHH
T ss_pred             --HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHHHccCCcEEEEEeCCHHHHHHH
Confidence              78888 88899999998554    34445566666553 43 1 11111111222222232  334445578888999


Q ss_pred             HHHHHHhcCCeEEeCCcchHHHH-----------------HHH-----HHHHHHHHHHHHHHHHhccc
Q psy755          137 KPILKCMGRNIVHCGDSGNGQVA-----------------KLC-----NNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       137 ~~l~~~~g~~~~~~g~~g~a~~~-----------------k~~-----~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +++|+..|.++++.++...+.+.                 |+.     .|.+......++.|+..+++
T Consensus       166 ~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la~  233 (335)
T 1txg_A          166 KEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIE  233 (335)
T ss_dssp             HHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999988888887656554                 555     66677777888888888775

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=99.69  E-value=7.2e-17  Score=117.90  Aligned_cols=144  Identities=19%  Similarity=0.232  Sum_probs=107.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.++|..|++.|++|++|||+++                  .++++|+||+++| +..++.++   +++.+.++ +++|
T Consensus        30 mG~~la~~l~~~g~~V~~~~~~~~------------------~~~~aD~vi~av~-~~~~~~v~---~~l~~~~~-~~~v   86 (209)
T 2raf_A           30 MGQAIGHNFEIAGHEVTYYGSKDQ------------------ATTLGEIVIMAVP-YPALAALA---KQYATQLK-GKIV   86 (209)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTCC------------------CSSCCSEEEECSC-HHHHHHHH---HHTHHHHT-TSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHH------------------HhccCCEEEEcCC-cHHHHHHH---HHHHHhcC-CCEE
Confidence            799999999999999999999876                  4578999999999 57788887   77878887 9999


Q ss_pred             EeccCCCc-h--------h----HHHHHHHHHhcCCcEEee-cccCCHHHHh---c--CceEEEecC-CHHHHHHHHHHH
Q psy755           81 IDSSTVDP-Q--------V----PQTLSNLAREKQITFLDA-PVSGGTKAAQ---E--ATLTFMVGG-DKSSLEKAKPIL  140 (183)
Q Consensus        81 id~s~~~~-~--------~----~~~~~~~~~~~g~~~~~~-~~~~~~~~~~---~--~~~~~~~~g-~~~~~~~~~~l~  140 (183)
                      +++++..+ .        .    .+.+.+.++  +.+++.. ....+|....   .  +...+++++ +++..+.++++|
T Consensus        87 i~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~~~~~~~~v~~ll  164 (209)
T 2raf_A           87 VDITNPLNFDTWDDLVVPADSSAAQELQQQLP--DSQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGNDDSAKQRFTRAL  164 (209)
T ss_dssp             EECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT--TSEEEECSTTSCHHHHHHSEETTTEECEEEEEESCHHHHHHHHHHT
T ss_pred             EEECCCCCccccccccCCCCCcHHHHHHHHCC--CCcEEEeeecccHhhccccccCCCCCceeEEcCCCHHHHHHHHHHH
Confidence            99998554 1        1    344555443  4566662 1112232221   1  233444444 568889999999


Q ss_pred             HHhcCCeEEeCCcchHHHHHHHHHHHHHH
Q psy755          141 KCMGRNIVHCGDSGNGQVAKLCNNMLLGV  169 (183)
Q Consensus       141 ~~~g~~~~~~g~~g~a~~~k~~~~~~~~~  169 (183)
                      +.+|.+++++++.+.+.++|++.|++...
T Consensus       165 ~~~G~~~~~~~~i~~a~~~K~i~~l~~~~  193 (209)
T 2raf_A          165 ADSPLEVKDAGKLKRARELEAMGFMQMTL  193 (209)
T ss_dssp             TTSSCEEEEEESGGGHHHHHHHHHHHHHH
T ss_pred             HHcCCceEeCCCHhHHHHhcchHHHHHHH
Confidence            99999999999999999999999888654

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=99.69  E-value=1.9e-16  Score=127.35  Aligned_cols=160  Identities=14%  Similarity=0.148  Sum_probs=112.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH--------HHHHHcCC-------------cccCCHHHHhccCCEEEEecCChHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS--------QTLAKEGA-------------NMALSLSTLASGAEFIISMLPASQD   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~--------~~~~~~g~-------------~~~~~~~~~~~~adiVi~~vp~~~~   59 (183)
                      ||.+||..|+++|++|++||+++++.        +++.+.|.             ..+++++ .+++||+||+|||....
T Consensus        65 MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~aDlVIeAVpe~~~  143 (460)
T 3k6j_A           65 MGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNCDLIVESVIEDMK  143 (460)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTCSEEEECCCSCHH
T ss_pred             HHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccCCEEEEcCCCCHH
Confidence            89999999999999999999999843        23333332             3455664 68899999999998877


Q ss_pred             HHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh----cCCcEEeecccCCHHHHhcCceEEEecC---CHHH
Q psy755           60 VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE----KQITFLDAPVSGGTKAAQEATLTFMVGG---DKSS  132 (183)
Q Consensus        60 ~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~  132 (183)
                      ++..++  +++.+.++++++|++.|++.+.+  .+.+.+..    .|.||++ |+.       ..+++.++.+   ++++
T Consensus       144 vk~~v~--~~l~~~~~~~aIlasnTSsl~i~--~ia~~~~~p~r~iG~Hffn-Pv~-------~m~LvEIv~g~~Ts~e~  211 (460)
T 3k6j_A          144 LKKELF--ANLENICKSTCIFGTNTSSLDLN--EISSVLRDPSNLVGIHFFN-PAN-------VIRLVEIIYGSHTSSQA  211 (460)
T ss_dssp             HHHHHH--HHHHTTSCTTCEEEECCSSSCHH--HHHTTSSSGGGEEEEECCS-STT-------TCCEEEEECCSSCCHHH
T ss_pred             HHHHHH--HHHHhhCCCCCEEEecCCChhHH--HHHHhccCCcceEEEEecc-hhh-------hCCEEEEEeCCCCCHHH
Confidence            776555  77888999999998777665543  33332221    1445554 221       2334444443   7899


Q ss_pred             HHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy755          133 LEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG  181 (183)
Q Consensus       133 ~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~  181 (183)
                      ++.+.++++.+|+.++++++ +.+.   ++++++..    .++|++.++
T Consensus       212 ~~~~~~l~~~lGk~~v~v~d-~pGf---i~Nril~~----~~~EA~~l~  252 (460)
T 3k6j_A          212 IATAFQACESIKKLPVLVGN-CKSF---VFNRLLHV----YFDQSQKLM  252 (460)
T ss_dssp             HHHHHHHHHHTTCEEEEESS-CCHH---HHHHHHHH----HHHHHHHHH
T ss_pred             HHHHHHHHHHhCCEEEEEec-ccHH---HHHHHHHH----HHHHHHHHH
Confidence            99999999999999999987 4554   34544443    467777766

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=99.69  E-value=4e-17  Score=128.63  Aligned_cols=178  Identities=18%  Similarity=0.179  Sum_probs=125.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC--------------CcccCCHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG--------------ANMALSLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||.++|..|++.|++|++|||++++++.+.+.+              +...+++.+++.++|+||+++|+ ..++.++  
T Consensus        26 mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~-~~~~~v~--  102 (366)
T 1evy_A           26 FGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT-QFLRGFF--  102 (366)
T ss_dssp             HHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH-HHHHHHH--
T ss_pred             HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh-HHHHHHH--
Confidence            799999999999999999999999988887653              23346788888999999999986 6788887  


Q ss_pred             Ccc----ccccCCC-CcEEEeccCC-CchhHHHHHHHHHhc-CCc---EEeecccCCHHHHhcCceEEEecCCHHHHHHH
Q psy755           67 SDG----ILKHAKP-GVIVIDSSTV-DPQVPQTLSNLAREK-QIT---FLDAPVSGGTKAAQEATLTFMVGGDKSSLEKA  136 (183)
Q Consensus        67 ~~~----l~~~l~~-~~iiid~s~~-~~~~~~~~~~~~~~~-g~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  136 (183)
                       ++    +.+.+++ +++|+++++. .+.....+.+.+.+. +.+   +...|..............++.+++++..+.+
T Consensus       103 -~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~~~g~~~~~~~~~~~~~~~~~v  181 (366)
T 1evy_A          103 -EKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIASADINVARRL  181 (366)
T ss_dssp             -HHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHTTCCEEEEEECSSHHHHHHH
T ss_pred             -HHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHHHhCCceEEEEecCCHHHHHHH
Confidence             66    8888888 9999999854 444333344444433 322   22233222111111222334456678888999


Q ss_pred             HHHHHHh--cCCeEEeCCcchHHHHHHH-----------------HHHHHHHHHHHHHHHHhccc
Q psy755          137 KPILKCM--GRNIVHCGDSGNGQVAKLC-----------------NNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       137 ~~l~~~~--g~~~~~~g~~g~a~~~k~~-----------------~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +++|+..  +.++++.++.-...+.|.+                 .|.+......++.|++.+++
T Consensus       182 ~~ll~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~la~  246 (366)
T 1evy_A          182 QRIMSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTA  246 (366)
T ss_dssp             HHHHSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHH
Confidence            9999999  8888777775445554443                 56667778899999998875

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=99.69  E-value=2.9e-15  Score=111.97  Aligned_cols=143  Identities=15%  Similarity=0.181  Sum_probs=103.9

Q ss_pred             CcHHHHHHHHhCCC----cEEEEcCCchhHHHHHH-cCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH----DVIVYDKNTDASQTLAK-EGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~----~V~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||.++++.|.+.|+    +|++|||++++.+.+.+ .|+...+++.++++++|+||+++|+ +.++.++   +++.+.++
T Consensus        13 mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~---~~l~~~l~   88 (247)
T 3gt0_A           13 MGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII---NEIKEIIK   88 (247)
T ss_dssp             HHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC------CCSSC
T ss_pred             HHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH---HHHHhhcC
Confidence            79999999999998    99999999999998875 4888888999999999999999965 6788887   78888899


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEe--cCCHHHHHHHHHHHHHhcCCeEEeCC
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMV--GGDKSSLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~l~~~~g~~~~~~g~  152 (183)
                      ++++|++.+++.+..  .+.+.+. .+.+++.. +...|.....|...+..  +++++.++.++++|+.+|. ++++++
T Consensus        89 ~~~~vvs~~~gi~~~--~l~~~~~-~~~~~v~~-~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~-~~~~~e  162 (247)
T 3gt0_A           89 NDAIIVTIAAGKSIE--STENAFN-KKVKVVRV-MPNTPALVGEGMSALCPNEMVTEKDLEDVLNIFNSFGQ-TEIVSE  162 (247)
T ss_dssp             TTCEEEECSCCSCHH--HHHHHHC-SCCEEEEE-ECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHGGGEE-EEECCG
T ss_pred             CCCEEEEecCCCCHH--HHHHHhC-CCCcEEEE-eCChHHHHcCceEEEEeCCCCCHHHHHHHHHHHHhCCC-EEEeCH
Confidence            999988666555432  3444443 23344431 12233333344433333  3688999999999999998 666664

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=99.69  E-value=2.4e-16  Score=121.17  Aligned_cols=165  Identities=18%  Similarity=0.254  Sum_probs=111.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------cC------------------CcccCCHHHHhccCCEEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------EG------------------ANMALSLSTLASGAEFII   51 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g------------------~~~~~~~~~~~~~adiVi   51 (183)
                      ||.+||..|+++|++|++||+++++++++.+           .|                  +...+++.+.+++||+||
T Consensus        26 mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aD~Vi  105 (302)
T 1f0y_A           26 MGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVV  105 (302)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHHHHTTSCSEEE
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHHHhhcCCCEEE
Confidence            7999999999999999999999988776422           22                  234567887889999999


Q ss_pred             EecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEecC--
Q psy755           52 SMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMVGG--  128 (183)
Q Consensus        52 ~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g--  128 (183)
                      +++|.+.+++..++  +++.+.++++++|++.++..+..  .+.+.+. ...+++. +|+.  |.  ..++.+.++.+  
T Consensus       106 ~avp~~~~~~~~v~--~~l~~~~~~~~iv~s~ts~i~~~--~l~~~~~-~~~~~~g~h~~~--P~--~~~~~~~i~~g~~  176 (302)
T 1f0y_A          106 EAIVENLKVKNELF--KRLDKFAAEHTIFASNTSSLQIT--SIANATT-RQDRFAGLHFFN--PV--PVMKLVEVIKTPM  176 (302)
T ss_dssp             ECCCSCHHHHHHHH--HHHTTTSCTTCEEEECCSSSCHH--HHHTTSS-CGGGEEEEEECS--ST--TTCCEEEEECCTT
T ss_pred             EcCcCcHHHHHHHH--HHHHhhCCCCeEEEECCCCCCHH--HHHHhcC-CcccEEEEecCC--Cc--ccCceEEEeCCCC
Confidence            99998766554333  67888888899888766655433  2332221 1112333 2222  11  12334445544  


Q ss_pred             -CHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          129 -DKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       129 -~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                       +++.++.+.++++.+|..++++++. .+   +++++++.    ..++|++.+++
T Consensus       177 ~~~e~~~~~~~l~~~~G~~~v~~~~~-~g---~i~nr~l~----~~~~Ea~~l~~  223 (302)
T 1f0y_A          177 TSQKTFESLVDFSKALGKHPVSCKDT-PG---FIVNRLLV----PYLMEAIRLYE  223 (302)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECSC-TT---TTHHHHHH----HHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHcCCceEEecCc-cc---ccHHHHHH----HHHHHHHHHHH
Confidence             8899999999999999988888762 23   34455443    45778877765

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=99.68  E-value=3.9e-18  Score=130.07  Aligned_cols=176  Identities=14%  Similarity=0.071  Sum_probs=124.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC---C-----cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG---A-----NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g---~-----~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||..+|..|.+.|++|++|||++++.+.+...+   .     ...++ .+.++++|+||+++|.. .++.++   +++.+
T Consensus        11 ~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~~~-~~~~v~---~~l~~   85 (291)
T 1ks9_A           11 LGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLKAW-QVSDAV---KSLAS   85 (291)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSCGG-GHHHHH---HHHHT
T ss_pred             HHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEecHH-hHHHHH---HHHHh
Confidence            799999999999999999999988765443222   1     01233 46678999999999985 477887   78888


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHh--cCCcEEeecccCC-HHHHhcCceEEEe-cCCHHHHHHHHHHHHHhcCCeE
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLARE--KQITFLDAPVSGG-TKAAQEATLTFMV-GGDKSSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~-~~~~~~~~~~~~~-~g~~~~~~~~~~l~~~~g~~~~  148 (183)
                      .++++++|+++++.... .+.+.+.+++  .|..+......+. +.....+...+.. +++++..+.++++|+.+|.+++
T Consensus        86 ~l~~~~~vv~~~~g~~~-~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g~~~~  164 (291)
T 1ks9_A           86 TLPVTTPILLIHNGMGT-IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVLPDVA  164 (291)
T ss_dssp             TSCTTSCEEEECSSSCT-TGGGTTCCSCEEEEEECCEEEEETTEEEEEECCCEEEEESSGGGTTCTHHHHHHHTTSSCEE
T ss_pred             hCCCCCEEEEecCCCCc-HHHHHHhcCCeEEEEEeEccEEcCCEEEEecccceEEccCCCCcchHHHHHHHHHhcCCCCe
Confidence            89899999998775422 2233333322  1222111112221 2223346545543 3456677899999999999999


Q ss_pred             EeCCcchHHHHHHHHHHHH------------------HHHHHHHHHHHhccc
Q psy755          149 HCGDSGNGQVAKLCNNMLL------------------GVTMMGVAEAMNLGV  182 (183)
Q Consensus       149 ~~g~~g~a~~~k~~~~~~~------------------~~~~~~~~E~~~~~~  182 (183)
                      +.++.+.+.+.|++.|...                  ......+.|++.+++
T Consensus       165 ~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~  216 (291)
T 1ks9_A          165 WHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIE  216 (291)
T ss_dssp             ECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHH
T ss_pred             ecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988                  677899999988875

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=99.68  E-value=1.4e-16  Score=124.10  Aligned_cols=170  Identities=15%  Similarity=0.215  Sum_probs=117.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC-----------CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG-----------ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      ||.++|.+|+++|++|++|+|++++++.+.+.|           +..++++.+ +.++|+||++||+ +.++.++   ++
T Consensus        25 mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~-~~~~~v~---~~   99 (335)
T 1z82_A           25 WGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV-QYIREHL---LR   99 (335)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-GGHHHHH---TT
T ss_pred             HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-HHHHHHH---HH
Confidence            799999999999999999999999999888776           345667888 8899999999986 7788887   56


Q ss_pred             ccccCCCCcEEEeccCC-CchhHHHHHHHHHhcCCcEEeecccCCH---HHHhcCceE-EEecCCHHHHHHHHHHHHHhc
Q psy755           70 ILKHAKPGVIVIDSSTV-DPQVPQTLSNLAREKQITFLDAPVSGGT---KAAQEATLT-FMVGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~g  144 (183)
                      +.+   ++++||++++. .+.+.+.+.+.+.+..-  .+.++..+|   .....+... +..++.+  .+.++++|+..|
T Consensus       100 l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~--~~~~~~~~P~~~~~~~~g~~~~~~~g~~~--~~~~~~ll~~~g  172 (335)
T 1z82_A          100 LPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG--CPYAVLSGPSHAEEVAKKLPTAVTLAGEN--SKELQKRISTEY  172 (335)
T ss_dssp             CSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC--CCEEEEESSCCHHHHHTTCCEEEEEEETT--HHHHHHHHCCSS
T ss_pred             hCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC--CceEEEECCccHHHHhCCCceEEEEEehh--HHHHHHHhCCCC
Confidence            655   78999999965 44343444555443311  122222222   222344422 2333333  788999999999


Q ss_pred             CCeEEeCCcchHHHHHHH-----------------HHHHHHHHHHHHHHHHhccc
Q psy755          145 RNIVHCGDSGNGQVAKLC-----------------NNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       145 ~~~~~~g~~g~a~~~k~~-----------------~~~~~~~~~~~~~E~~~~~~  182 (183)
                      .++++.++.-...+.|++                 .|.+......++.|+..+++
T Consensus       173 ~~~~~~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~  227 (335)
T 1z82_A          173 FRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGM  227 (335)
T ss_dssp             EEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            988877775434444333                 45555677788889888775

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=99.67  E-value=7.6e-16  Score=120.71  Aligned_cols=176  Identities=15%  Similarity=0.134  Sum_probs=125.1

Q ss_pred             CcHHHHHHHHhCC-------CcEEEEcCCch-----hHHHHHHcC--------------CcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNG-------HDVIVYDKNTD-----ASQTLAKEG--------------ANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g-------~~V~~~~~~~~-----~~~~~~~~g--------------~~~~~~~~~~~~~adiVi~~v   54 (183)
                      ||.++|..|+++|       ++|++|||+++     +.+.+.+.+              +...+++.++++++|+||+++
T Consensus        19 mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aD~Vilav   98 (354)
T 1x0v_A           19 WGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAAEDADILIFVV   98 (354)
T ss_dssp             HHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHHHTTCSEEEECC
T ss_pred             HHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHHHcCCCEEEEeC
Confidence            7999999999999       99999999998     777776532              233467788889999999999


Q ss_pred             CChHHHHHHhcCCccccccCCCCcEEEeccCCCc---hhHHHHHHHHHhc-CCc--EEeecccCCHHHHhcC--ceEEEe
Q psy755           55 PASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDP---QVPQTLSNLAREK-QIT--FLDAPVSGGTKAAQEA--TLTFMV  126 (183)
Q Consensus        55 p~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~---~~~~~~~~~~~~~-g~~--~~~~~~~~~~~~~~~~--~~~~~~  126 (183)
                      |+ +.++.++   +++.+.++++++|+++++...   .....+.+.+.+. +..  ....|-.  ......+  ....+.
T Consensus        99 ~~-~~~~~v~---~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~v~~gp~~--a~~v~~g~~~~~~~~  172 (354)
T 1x0v_A           99 PH-QFIGKIC---DQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIPMSVLMGANI--ASEVADEKFCETTIG  172 (354)
T ss_dssp             CG-GGHHHHH---HHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCCEEEEECSCC--HHHHHTTCCEEEEEE
T ss_pred             CH-HHHHHHH---HHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCCEEEEECCCc--HHHHHhcCCceEEEE
Confidence            87 6678887   788888989999999987543   2222222222221 311  2222222  2222233  233445


Q ss_pred             cCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHH-----------------HHHHHHHHHHHHHHHHhccc
Q psy755          127 GGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLC-----------------NNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       127 ~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~-----------------~~~~~~~~~~~~~E~~~~~~  182 (183)
                      +.+++..+.++++|+..|.++++.++.-...+.|.+                 .|.+......++.|+..+++
T Consensus       173 ~~~~~~~~~v~~ll~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~~~~~E~~~la~  245 (354)
T 1x0v_A          173 CKDPAQGQLLKELMQTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAK  245 (354)
T ss_dssp             CSSHHHHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCHHHHHHHHHHhCCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHHHH
Confidence            667888899999999999988888887667777666                 56666778889999988875

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=99.67  E-value=3.5e-16  Score=114.75  Aligned_cols=156  Identities=17%  Similarity=0.178  Sum_probs=112.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..++..|.+.|++|++|||++++.+.+.+.|+... ++.++++++|+||+++|. ...+.++   + +.+.+ ++++|
T Consensus        39 ~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~-~~~~~v~---~-l~~~~-~~~~v  111 (215)
T 2vns_A           39 FARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFR-EHYSSLC---S-LSDQL-AGKIL  111 (215)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCG-GGSGGGG---G-GHHHH-TTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCCh-HHHHHHH---H-HHHhc-CCCEE
Confidence            6899999999999999999999998888766666555 788888999999999996 4555654   3 55555 89999


Q ss_pred             EeccCCCchhHH--------HHHHHHHhcCCcEEee--cccCCHHHH---hcCc-eEEEecCCHHHHHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQ--------TLSNLAREKQITFLDA--PVSGGTKAA---QEAT-LTFMVGGDKSSLEKAKPILKCMGRN  146 (183)
Q Consensus        81 id~s~~~~~~~~--------~~~~~~~~~g~~~~~~--~~~~~~~~~---~~~~-~~~~~~g~~~~~~~~~~l~~~~g~~  146 (183)
                      +|+++..+....        .+.+.+.  +.+++.+  ++.+ ....   ..++ .+++.+++++..+.++++|+.+|.+
T Consensus       112 v~~s~g~~~~~l~~~~~~~~~l~~~l~--~~~vv~~~n~~~~-~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G~~  188 (215)
T 2vns_A          112 VDVSNPTEQEHLQHRESNAEYLASLFP--TCTVVKAFNVISA-WTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMGFM  188 (215)
T ss_dssp             EECCCCCHHHHHHCSSCHHHHHHHHCT--TSEEEEECTTBCH-HHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTTCE
T ss_pred             EEeCCCcccccccccccHHHHHHHHCC--CCeEEeccccccH-hHhcccccCCceeEEEecCCHHHHHHHHHHHHHcCCc
Confidence            999998875431        1122222  2233331  1111 1111   1122 3567778999999999999999999


Q ss_pred             eEEeCCcchHHHHHHHHHHH
Q psy755          147 IVHCGDSGNGQVAKLCNNML  166 (183)
Q Consensus       147 ~~~~g~~g~a~~~k~~~~~~  166 (183)
                      ++++|+.++|+.++.+.++|
T Consensus       189 ~~~~g~~~~~~~~e~~~~~~  208 (215)
T 2vns_A          189 PVDMGSLASAWEVEAMPLRL  208 (215)
T ss_dssp             EEECCSGGGHHHHHHSCCBC
T ss_pred             eEeecchhhhhHhhhhhhhh
Confidence            99999999999998754443

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=99.49  E-value=4.4e-18  Score=123.64  Aligned_cols=151  Identities=19%  Similarity=0.232  Sum_probs=105.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..+|..|.+.|++|++|+|+++ .+.+...++... ++.++++++|+||+++|.. .++.++    ++.+ +.++++|
T Consensus        30 mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~-~~~~v~----~l~~-~~~~~iv  101 (201)
T 2yjz_A           30 FGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHRE-HYDFLA----ELAD-SLKGRVL  101 (201)
Confidence            899999999999999999999987 555555565555 7778888999999999974 566664    3433 3578999


Q ss_pred             EeccCCCchh------HHHHHHHHHhcCCcEEee-cccCCHHHHhcCc-----eEEEecCCHHHHHHHHHHHHHhcCCeE
Q psy755           81 IDSSTVDPQV------PQTLSNLAREKQITFLDA-PVSGGTKAAQEAT-----LTFMVGGDKSSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        81 id~s~~~~~~------~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~-----~~~~~~g~~~~~~~~~~l~~~~g~~~~  148 (183)
                      ||+++..+..      ...+.+.+...  +.+.+ |..+. .....|.     ..++++++++.++.++++|+.+|.+++
T Consensus       102 I~~~~G~~~~~~~~~~~~~l~~~~~~~--~vvra~~n~~a-~~~~~g~l~g~~~~~~~g~~~~~~~~v~~ll~~~G~~~~  178 (201)
T 2yjz_A          102 IDVSNNQKMNQYPESNAEYLAQLVPGA--HVVKAFNTISA-WALQSGTLDASRQVFVCGNDSKAKDRVMDIARTLGLTPL  178 (201)
Confidence            9999988732      22233332211  11110 00000 0111122     156677788889999999999999999


Q ss_pred             EeCCcchHHHHHHH
Q psy755          149 HCGDSGNGQVAKLC  162 (183)
Q Consensus       149 ~~g~~g~a~~~k~~  162 (183)
                      ++|++++|.++|.+
T Consensus       179 ~~G~l~~a~~~e~~  192 (201)
T 2yjz_A          179 DQGSLVAAKEIENY  192 (201)
Confidence            99999999999865

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=99.65  E-value=1e-16  Score=123.64  Aligned_cols=175  Identities=10%  Similarity=0.080  Sum_probs=125.7

Q ss_pred             CcHHHHHHHHhC-----C-CcEEEEcCCchhHHHHHH-cCCcccC-------------CHHHHhccCCEEEEecCChHHH
Q psy755            1 MGSHMARNLLKN-----G-HDVIVYDKNTDASQTLAK-EGANMAL-------------SLSTLASGAEFIISMLPASQDV   60 (183)
Q Consensus         1 mG~~iA~~l~~~-----g-~~V~~~~~~~~~~~~~~~-~g~~~~~-------------~~~~~~~~adiVi~~vp~~~~~   60 (183)
                      ||..+|..|.+.     | ++|++|+| +++.+.+.+ .|....+             +..+.+..+|+||+++|..+ +
T Consensus        19 mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vil~vk~~~-~   96 (317)
T 2qyt_A           19 VGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDYILFCTKDYD-M   96 (317)
T ss_dssp             HHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEEEEECCSSSC-H
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCEEEEecCccc-H
Confidence            799999999999     9 99999999 788888887 6654332             33456789999999999855 6


Q ss_pred             HHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh----cCCcEEeecccC-CH-HHHhcCceEEEe----cCCH
Q psy755           61 LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE----KQITFLDAPVSG-GT-KAAQEATLTFMV----GGDK  130 (183)
Q Consensus        61 ~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~----~g~~~~~~~~~~-~~-~~~~~~~~~~~~----~g~~  130 (183)
                      +.++   +++.+.+.++++|+++++... ..+.+.+.+++    .|..++++++.+ +. .....+...++.    +++.
T Consensus        97 ~~v~---~~i~~~l~~~~~iv~~~nG~~-~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~~~ig~~~~~~~~  172 (317)
T 2qyt_A           97 ERGV---AEIRPMIGQNTKILPLLNGAD-IAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADRELFYFGSGLPEQTD  172 (317)
T ss_dssp             HHHH---HHHGGGEEEEEEEEECSCSSS-HHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEEEEEECCSSSCCH
T ss_pred             HHHH---HHHHhhcCCCCEEEEccCCCC-cHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCceEEEcCCCCCCcC
Confidence            7777   788888888999999887643 22344444433    233455555543 11 122234333232    1245


Q ss_pred             HHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHH-------------------HHHHHHHHHHhccc
Q psy755          131 SSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLG-------------------VTMMGVAEAMNLGV  182 (183)
Q Consensus       131 ~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~-------------------~~~~~~~E~~~~~~  182 (183)
                      +.. .++++|+..|.++++.++.+.+.+.|++.|....                   .....+.|++.+++
T Consensus       173 ~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E~~~v~~  242 (317)
T 2qyt_A          173 DEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEEVAELFR  242 (317)
T ss_dssp             HHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            666 8999999999998889999999999999998754                   44478888888765

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=99.65  E-value=2.9e-15  Score=114.04  Aligned_cols=140  Identities=13%  Similarity=0.221  Sum_probs=106.8

Q ss_pred             CcHHHHHHHHhCCC---cEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc-CC
Q psy755            1 MGSHMARNLLKNGH---DVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH-AK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~---~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~-l~   75 (183)
                      ||.+|+..|.++|+   +|++|||++++.+++.+. |+....++.++++++|+||+++|+ +.++.++   +++.+. ++
T Consensus        14 mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl---~~l~~~~l~   89 (280)
T 3tri_A           14 MARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC---EELKDILSE   89 (280)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH---HHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH---HHHHhhccC
Confidence            79999999999999   999999999999998886 888888999999999999999975 7788888   888888 88


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEec---CCHHHHHHHHHHHHHhcCCeEEeC
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMVG---GDKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      ++++|++++++.+.  ..+.+.+.. +.+++. +|  ..|.....+- +.++.   .+++.++.++++|+++|. .+++.
T Consensus        90 ~~~iiiS~~agi~~--~~l~~~l~~-~~~vvr~mP--n~p~~v~~g~-~~l~~~~~~~~~~~~~v~~l~~~iG~-~~~v~  162 (280)
T 3tri_A           90 TKILVISLAVGVTT--PLIEKWLGK-ASRIVRAMP--NTPSSVRAGA-TGLFANETVDKDQKNLAESIMRAVGL-VIWVS  162 (280)
T ss_dssp             TTCEEEECCTTCCH--HHHHHHHTC-CSSEEEEEC--CGGGGGTCEE-EEEECCTTSCHHHHHHHHHHHGGGEE-EEECS
T ss_pred             CCeEEEEecCCCCH--HHHHHHcCC-CCeEEEEec--CChHHhcCcc-EEEEeCCCCCHHHHHHHHHHHHHCCC-eEEEC
Confidence            88888877766654  345555532 344554 33  3344444443 33443   367889999999999998 44453

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=99.63  E-value=7e-16  Score=118.86  Aligned_cols=167  Identities=14%  Similarity=0.149  Sum_probs=124.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------cC--------------CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------EG--------------ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g--------------~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      ||..||..++.+|++|++||++++.+++..+           .|              +..++++.+++++||+|+.++|
T Consensus        17 MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a~~~ad~ViEav~   96 (319)
T 3ado_A           17 VGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVVHIQECVP   96 (319)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHHTTTEEEEEECCC
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhHhccCcEEeeccc
Confidence            8999999999999999999999987654322           11              2345678888999999999999


Q ss_pred             ChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeec-ccCCHHHHhcCceEEEe---cCC
Q psy755           56 ASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAP-VSGGTKAAQEATLTFMV---GGD  129 (183)
Q Consensus        56 ~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~-~~~~~~~~~~~~~~~~~---~g~  129 (183)
                      ....+|.-+|  .++.+..+++.++...||+.+.+..+-....+++  |.||++.| ++.         ++-++   ..+
T Consensus        97 E~l~iK~~lf--~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~---------LVEiv~g~~Ts  165 (319)
T 3ado_A           97 ENLDLKRKIF--AQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIP---------LVELVPHPETS  165 (319)
T ss_dssp             SCHHHHHHHH--HHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCC---------EEEEEECTTCC
T ss_pred             cHHHHHHHHH--HHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccc---------hHHhcCCCCCc
Confidence            9999998777  8888899999998877776666543222111222  66777633 332         23233   258


Q ss_pred             HHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy755          130 KSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAM  178 (183)
Q Consensus       130 ~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~  178 (183)
                      ++.++.+.++++.+|++++++-....|+.+..+...+..-.+..+.|+.
T Consensus       166 ~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGv  214 (319)
T 3ado_A          166 PATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGI  214 (319)
T ss_dssp             HHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCC
Confidence            8999999999999999998776667788888888777777777776654

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=99.62  E-value=1.2e-15  Score=129.21  Aligned_cols=161  Identities=18%  Similarity=0.244  Sum_probs=111.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH-----------HcC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA-----------KEG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||.+||..|+++|++|++||++++++++..           +.|             +..++++ +.+++||+||++||.
T Consensus       325 MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~aDlVIeaV~e  403 (715)
T 1wdk_A          325 MGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGNVDLVVEAVVE  403 (715)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGGCSEEEECCCS
T ss_pred             hhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHHCCCCEEEEcCCC
Confidence            899999999999999999999999877632           223             2234555 668899999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh----cCCcEEeecccCCHHHHhcCceEEEecC---C
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE----KQITFLDAPVSGGTKAAQEATLTFMVGG---D  129 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~g---~  129 (183)
                      +..++..++  .++.+.++++++|++.|++.+.+  .+.+.+..    .|.||++ |+.       ..+.+.++.+   +
T Consensus       404 ~~~vk~~v~--~~l~~~~~~~~IlasntStl~i~--~la~~~~~~~~~ig~hf~~-P~~-------~~~lvevv~g~~t~  471 (715)
T 1wdk_A          404 NPKVKQAVL--AEVENHVREDAILASNTSTISIS--LLAKALKRPENFVGMHFFN-PVH-------MMPLVEVIRGEKSS  471 (715)
T ss_dssp             CHHHHHHHH--HHHHTTSCTTCEEEECCSSSCHH--HHGGGCSCGGGEEEEECCS-STT-------TCCEEEEEECSSCC
T ss_pred             CHHHHHHHH--HHHHhhCCCCeEEEeCCCCCCHH--HHHHHhcCccceEEEEccC-Ccc-------cCceEEEEECCCCC
Confidence            887766554  67888898999998776665543  23332211    1444444 221       2233444443   8


Q ss_pred             HHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          130 KSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       130 ~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      ++.++.+.++++.+|+.++++++. .+.   ++++++.    ..++|++.+++
T Consensus       472 ~e~~~~~~~l~~~lGk~~v~v~d~-~Gf---i~Nril~----~~~~Ea~~l~~  516 (715)
T 1wdk_A          472 DLAVATTVAYAKKMGKNPIVVNDC-PGF---LVNRVLF----PYFGGFAKLVS  516 (715)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEESC-TTT---THHHHHH----HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCEeEEEcCC-CCh---hhhHHHH----HHHHHHHHHHH
Confidence            899999999999999999999873 344   3344443    35777777664

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=99.60  E-value=1.9e-14  Score=108.27  Aligned_cols=155  Identities=11%  Similarity=0.162  Sum_probs=107.1

Q ss_pred             CcHHHHHHHHhCC----CcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNG----HDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g----~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||.++|..|.+.|    ++|++|||++++      .|+...+++.++++++|+||+++|+ ..++.++   +++.+.+ +
T Consensus        15 mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v~---~~l~~~l-~   83 (262)
T 2rcy_A           15 MGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKP-DIAGSVL---NNIKPYL-S   83 (262)
T ss_dssp             HHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCT-TTHHHHH---HHSGGGC-T
T ss_pred             HHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCH-HHHHHHH---HHHHHhc-C
Confidence            7999999999999    799999999987      4777777888989999999999996 6688887   7788888 4


Q ss_pred             CcE-EEeccCCCchhHHHHHHHHHhc--CCcEE-eecccCCHHHHhcCceEEEecC---CHHHHHHHHHHHHHhcCCeEE
Q psy755           77 GVI-VIDSSTVDPQVPQTLSNLAREK--QITFL-DAPVSGGTKAAQEATLTFMVGG---DKSSLEKAKPILKCMGRNIVH  149 (183)
Q Consensus        77 ~~i-iid~s~~~~~~~~~~~~~~~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~l~~~~g~~~~~  149 (183)
                      +++ |.++++..+.   .+.+.++..  .++++ ++|+.     ...+ .++++.+   +++.++.++++|+.+|. +++
T Consensus        84 ~~~vv~~~~gi~~~---~l~~~~~~~~~~v~~~p~~p~~-----~~~g-~~~~~~~~~~~~~~~~~~~~ll~~~G~-~~~  153 (262)
T 2rcy_A           84 SKLLISICGGLNIG---KLEEMVGSENKIVWVMPNTPCL-----VGEG-SFIYCSNKNVNSTDKKYVNDIFNSCGI-IHE  153 (262)
T ss_dssp             TCEEEECCSSCCHH---HHHHHHCTTSEEEEEECCGGGG-----GTCE-EEEEEECTTCCHHHHHHHHHHHHTSEE-EEE
T ss_pred             CCEEEEECCCCCHH---HHHHHhCCCCcEEEECCChHHH-----HcCC-eEEEEeCCCCCHHHHHHHHHHHHhCCC-EEE
Confidence            554 4455555553   334444331  12333 23333     3345 4556554   67888999999999998 888


Q ss_pred             eCCcchHHHHHHH--HHHHHHHHHHHHHH
Q psy755          150 CGDSGNGQVAKLC--NNMLLGVTMMGVAE  176 (183)
Q Consensus       150 ~g~~g~a~~~k~~--~~~~~~~~~~~~~E  176 (183)
                      +++.......++.  .|.+....+..+.|
T Consensus       154 ~~~~~~~~~~a~~~~~~~~~~~~~~al~~  182 (262)
T 2rcy_A          154 IKEKDMDIATAISGCGPAYVYLFIESLID  182 (262)
T ss_dssp             CCGGGHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred             eCHHHccHHHHHHccHHHHHHHHHHHHHH
Confidence            8875555555543  24444555555554

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=99.59  E-value=2.6e-15  Score=127.37  Aligned_cols=161  Identities=16%  Similarity=0.151  Sum_probs=111.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------cC-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------EG-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||.+||..|+++||+|++||++++++++..+           .|             +..++++ +.+++||+||+++|.
T Consensus       323 MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~~aDlVIeaVpe  401 (725)
T 2wtb_A          323 MGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFRDVDMVIEAVIE  401 (725)
T ss_dssp             HHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGTTCSEEEECCCS
T ss_pred             hhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHCCCCEEEEcCcC
Confidence            8999999999999999999999998776432           12             2234455 568899999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh----cCCcEEeecccCCHHHHhcCceEEEecC---C
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE----KQITFLDAPVSGGTKAAQEATLTFMVGG---D  129 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~g---~  129 (183)
                      +..++..++  .++.+.++++++|++.|++.+.+  .+.+.+..    .|.||++ |+.       ..+++.++.|   +
T Consensus       402 ~~~vk~~v~--~~l~~~~~~~~IlasntStl~i~--~la~~~~~p~~~iG~hf~~-P~~-------~~~lvevv~g~~t~  469 (725)
T 2wtb_A          402 NISLKQQIF--ADLEKYCPQHCILASNTSTIDLN--KIGERTKSQDRIVGAHFFS-PAH-------IMPLLEIVRTNHTS  469 (725)
T ss_dssp             CHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHH--HHTTTCSCTTTEEEEEECS-STT-------TCCEEEEEECSSCC
T ss_pred             CHHHHHHHH--HHHHhhCCCCcEEEeCCCCCCHH--HHHHHhcCCCCEEEecCCC-Ccc-------cCceEEEEECCCCC
Confidence            887766554  67888899999987766665543  23322211    2455554 221       1233444444   8


Q ss_pred             HHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhccc
Q psy755          130 KSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLGV  182 (183)
Q Consensus       130 ~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~~  182 (183)
                      ++.++.+.++++.+|+.++++++. .+..   +++.+.    ..++|++.+++
T Consensus       470 ~e~~~~~~~l~~~lGk~~v~v~d~-~Gfi---~Nril~----~~~~Ea~~l~~  514 (725)
T 2wtb_A          470 AQVIVDLLDVGKKIKKTPVVVGNC-TGFA---VNRMFF----PYTQAAMFLVE  514 (725)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEESS-TTTT---HHHHHH----HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCEEEEECCC-ccHH---HHHHHH----HHHHHHHHHHH
Confidence            899999999999999999999873 3443   344433    35777777665

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=99.59  E-value=2.6e-14  Score=105.24  Aligned_cols=142  Identities=16%  Similarity=0.134  Sum_probs=105.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||++||..|.++|++|++|++.                  ++ +++||  |+++|+. .+..++   +++.+.++++++|
T Consensus        17 ~G~sLA~~L~~~G~~V~~~~~~------------------~~-~~~aD--ilavP~~-ai~~vl---~~l~~~l~~g~iv   71 (232)
T 3dfu_A           17 STVNMAEKLDSVGHYVTVLHAP------------------ED-IRDFE--LVVIDAH-GVEGYV---EKLSAFARRGQMF   71 (232)
T ss_dssp             CCSCHHHHHHHTTCEEEECSSG------------------GG-GGGCS--EEEECSS-CHHHHH---HHHHTTCCTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEecCH------------------HH-hccCC--EEEEcHH-HHHHHH---HHHHHhcCCCCEE
Confidence            8999999999999999999982                  22 56799  9999985 678887   7888889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchHHH-
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQV-  158 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~-  158 (183)
                      +|+|++.+...   .+.....|.+|+. ||+.+.        ...+..++++.++.++++++.+|.+++++++.....+ 
T Consensus        72 vd~sgs~~~~v---l~~~~~~g~~fvg~HPm~g~--------~~~i~a~d~~a~~~l~~L~~~lG~~vv~~~~~~hd~~~  140 (232)
T 3dfu_A           72 LHTSLTHGITV---MDPLETSGGIVMSAHPIGQD--------RWVASALDELGETIVGLLVGELGGSIVEIADDKRAQLA  140 (232)
T ss_dssp             EECCSSCCGGG---GHHHHHTTCEEEEEEEEETT--------EEEEEESSHHHHHHHHHHHHHTTCEECCCCGGGHHHHH
T ss_pred             EEECCcCHHHH---HHHHHhCCCcEEEeeeCCCC--------ceeeeCCCHHHHHHHHHHHHHhCCEEEEeCHHHHhHHH
Confidence            99887655443   2223356888996 899764        2455666888999999999999999999998555555 


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q psy755          159 AKLCNNMLLGVTMMGVAEAM  178 (183)
Q Consensus       159 ~k~~~~~~~~~~~~~~~E~~  178 (183)
                      ....++......+....+++
T Consensus       141 AAvsh~nhLv~L~~~A~~ll  160 (232)
T 3dfu_A          141 AALTYAGFLSTLQRDASYFL  160 (232)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            22233333333334444444

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=99.57  E-value=2.3e-15  Score=114.32  Aligned_cols=155  Identities=13%  Similarity=0.155  Sum_probs=101.0

Q ss_pred             CcHHHHHHHHhCCCcE-EEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDV-IVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V-~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.+|++.|.+. ++| .+|||++++.+++.+. +. ...++.++++++|+||+++|+.. .+.++   +++.   .+++
T Consensus        13 mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~~~v~---~~l~---~~~~   83 (276)
T 2i76_A           13 LTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-IKTVA---NHLN---LGDA   83 (276)
T ss_dssp             HHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-HHHHH---TTTC---CSSC
T ss_pred             HHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-HHHHH---HHhc---cCCC
Confidence            789999999988 999 5999999998887654 66 66677777889999999999855 67776   5554   6789


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHh-cCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcchH-
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQ-EATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNG-  156 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a-  156 (183)
                      +|+|+|+..+.....  +.  ..+..+...++.+++.... .....+...++++.++.++++++.+|.+++++++.+.. 
T Consensus        84 ivi~~s~~~~~~~l~--~~--~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~  159 (276)
T 2i76_A           84 VLVHCSGFLSSEIFK--KS--GRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGKYFVIPSEKKKA  159 (276)
T ss_dssp             CEEECCSSSCGGGGC--SS--SEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCSCEEECCGGGHHH
T ss_pred             EEEECCCCCcHHHHH--Hh--hccccchhhhcCCCchhHHHhCCCeEEEEeChHHHHHHHHHHHHhCCCEEEECHHHHHH
Confidence            999999776664311  11  1111122234555444433 34455677778888999999999999999999865433 


Q ss_pred             --HHHHHHHHHHHH
Q psy755          157 --QVAKLCNNMLLG  168 (183)
Q Consensus       157 --~~~k~~~~~~~~  168 (183)
                        ...++..|++..
T Consensus       160 ~~~~~~l~~n~~~~  173 (276)
T 2i76_A          160 YHLAAVIASNFPVA  173 (276)
T ss_dssp             HHHHHHHHHTTHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence              234566665443

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=99.52  E-value=5.8e-14  Score=113.74  Aligned_cols=145  Identities=14%  Similarity=0.203  Sum_probs=100.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------cC-----------CcccCCHHHHhccCCEEEEecCChH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------EG-----------ANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-----------~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      ||.+||..|+++|++|++||+++++++++.+           .|           ...++++ +.+++||+||+++|...
T Consensus        48 MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~aDlVIeaVpe~~  126 (463)
T 1zcj_A           48 MGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTVDLVVEAVFEDM  126 (463)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTCSEEEECCCSCH
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCCCEEEEcCCCCH
Confidence            7999999999999999999999988766543           11           1224455 56789999999999876


Q ss_pred             HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHh----cCCcEEeecccCCHHHHhcCceEEEec---CCHH
Q psy755           59 DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLARE----KQITFLDAPVSGGTKAAQEATLTFMVG---GDKS  131 (183)
Q Consensus        59 ~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~  131 (183)
                      .++..++  +++.+.++++++|++.|++.+.+  .+.+.+..    .|.||+ .|..       ..+++.++.   ++++
T Consensus       127 ~~k~~v~--~~l~~~~~~~~ii~snTs~~~~~--~la~~~~~~~~~ig~hf~-~P~~-------~~~lvevv~g~~t~~e  194 (463)
T 1zcj_A          127 NLKKKVF--AELSALCKPGAFLCTNTSALNVD--DIASSTDRPQLVIGTHFF-SPAH-------VMRLLEVIPSRYSSPT  194 (463)
T ss_dssp             HHHHHHH--HHHHHHSCTTCEEEECCSSSCHH--HHHTTSSCGGGEEEEEEC-SSTT-------TCCEEEEEECSSCCHH
T ss_pred             HHHHHHH--HHHHhhCCCCeEEEeCCCCcCHH--HHHHHhcCCcceEEeecC-CCcc-------cceeEEEeCCCCCCHH
Confidence            6655443  67888888999998744443332  44443321    144554 2222       223344443   5889


Q ss_pred             HHHHHHHHHHHhcCCeEEeCCcchHHHH
Q psy755          132 SLEKAKPILKCMGRNIVHCGDSGNGQVA  159 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~~g~a~~~  159 (183)
                      .++.+.++++.+|+.++++++ ..+...
T Consensus       195 ~~~~~~~l~~~lGk~~v~v~~-~~gfi~  221 (463)
T 1zcj_A          195 TIATVMSLSKKIGKIGVVVGN-CYGFVG  221 (463)
T ss_dssp             HHHHHHHHHHHTTCEEEEBCC-STTTTH
T ss_pred             HHHHHHHHHHHhCCEEEEECC-CccHHH
Confidence            999999999999999999986 334443

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=99.46  E-value=3.5e-13  Score=105.08  Aligned_cols=143  Identities=17%  Similarity=0.184  Sum_probs=100.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh-HHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCc-cccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA-SQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSD-GILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~-~l~~~l~~~~   78 (183)
                      ||+++|..|.+.|++|++|+|++++ .+.+.+.|+... ++.+++++||+||+++|+.. ...++   + ++.+.+++++
T Consensus        27 mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~-~~~v~---~~~i~~~l~~~~  101 (338)
T 1np3_A           27 QGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEF-QGRLY---KEEIEPNLKKGA  101 (338)
T ss_dssp             HHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHH-HHHHH---HHHTGGGCCTTC
T ss_pred             HHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHH-HHHHH---HHHHHhhCCCCC
Confidence            7999999999999999999999876 566666787655 88888999999999999754 57776   6 8888999999


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHH-----HhcCceEEEe---cCCHHHHHHHHHHHHHhcC-C--
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKA-----AQEATLTFMV---GGDKSSLEKAKPILKCMGR-N--  146 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~-----~~~~~~~~~~---~g~~~~~~~~~~l~~~~g~-~--  146 (183)
                      +|+|+++.+.    .........+..++. +|.......     ...|..++++   ..+++..+.+.++++.+|. +  
T Consensus       102 ivi~~~gv~~----~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~l~~~lG~~~ag  177 (338)
T 1np3_A          102 TLAFAHGFSI----HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALSYACGVGGGRTG  177 (338)
T ss_dssp             EEEESCCHHH----HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHHHHHHTTHHHHC
T ss_pred             EEEEcCCchh----HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHHHHHHcCCCccc
Confidence            9998864321    111111123455655 662222111     1125444443   3467788899999999998 5  


Q ss_pred             eEEeCC
Q psy755          147 IVHCGD  152 (183)
Q Consensus       147 ~~~~g~  152 (183)
                      ++.+..
T Consensus       178 v~~~~~  183 (338)
T 1np3_A          178 IIETTF  183 (338)
T ss_dssp             EEECCH
T ss_pred             eEeech
Confidence            666654

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=99.36  E-value=4.6e-12  Score=98.62  Aligned_cols=157  Identities=17%  Similarity=0.190  Sum_probs=106.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-------------ccCCHHHHhccCCEEEEecCChHHHHHHhcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-------------MALSLSTLASGAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      ||..+|..|+++|++|++|+|+ ++.+.+.+.|..             ..+++++ +..+|+||++||. .+++.++   
T Consensus        14 ~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~-~~~~~~~---   87 (335)
T 3ghy_A           14 VGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA-PALESVA---   87 (335)
T ss_dssp             HHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH-HHHHHHH---
T ss_pred             HHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc-hhHHHHH---
Confidence            7999999999999999999996 677777766542             2346665 5889999999987 5688887   


Q ss_pred             ccccccCCCCcEEEeccCCCc------------------hhHHHHHHHHHhcCCcEEeecc-----cCCHHHHh---cCc
Q psy755           68 DGILKHAKPGVIVIDSSTVDP------------------QVPQTLSNLAREKQITFLDAPV-----SGGTKAAQ---EAT  121 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s~~~~------------------~~~~~~~~~~~~~g~~~~~~~~-----~~~~~~~~---~~~  121 (183)
                      +.+.+.++++++|+.+.+..+                  .....+.+.++..  +++.+..     ..+|..+.   .+.
T Consensus        88 ~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~--~v~~gv~~~~a~~~~pg~v~~~~~g~  165 (335)
T 3ghy_A           88 AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPTR--HVLGCVVHLTCATVSPGHIRHGNGRR  165 (335)
T ss_dssp             GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCGG--GEEEEEECCCEEESSTTEEEECSCCE
T ss_pred             HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCcc--cEEEEEEEEEEEEcCCcEEEECCCCe
Confidence            889999999999999888842                  1122344444322  2222111     11222111   132


Q ss_pred             eEEEe--cCCHHHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHH
Q psy755          122 LTFMV--GGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNM  165 (183)
Q Consensus       122 ~~~~~--~g~~~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~  165 (183)
                      ..+-.  +.+.+..+.+.++|+..|.++++..+.-...+.|++.|.
T Consensus       166 ~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na  211 (335)
T 3ghy_A          166 LILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNM  211 (335)
T ss_dssp             EEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTT
T ss_pred             EEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHh
Confidence            22211  123466688999999999988888888888888876544

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=99.34  E-value=2e-12  Score=109.59  Aligned_cols=164  Identities=13%  Similarity=0.129  Sum_probs=118.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----------------------CCcccCCHHHHhccCCEEEEecCChH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE----------------------GANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----------------------g~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      ||..||..++.+|++|+++|++++.+++..+.                      .+...++.. .+++||+||.+||...
T Consensus       327 MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aDlVIEAV~E~l  405 (742)
T 3zwc_A          327 MGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELSTVDLVVEAVFEDM  405 (742)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGG-GGGSCSEEEECCCSCH
T ss_pred             HHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHH-HHhhCCEEEEeccccH
Confidence            89999999999999999999999876554320                      122333444 4789999999999999


Q ss_pred             HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeec-ccCCHHHHhcCceEEEe---cCCHHH
Q psy755           59 DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAP-VSGGTKAAQEATLTFMV---GGDKSS  132 (183)
Q Consensus        59 ~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~-~~~~~~~~~~~~~~~~~---~g~~~~  132 (183)
                      .+|.-+|  .++.+..+++.++...||+.+.+..+-....+++  |.||++.| .+.         ++-++   ..++++
T Consensus       406 ~iK~~vf--~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~---------LVEvi~g~~Ts~e~  474 (742)
T 3zwc_A          406 NLKKKVF--AELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMR---------LLEVIPSRYSSPTT  474 (742)
T ss_dssp             HHHHHHH--HHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCC---------EEEEEECSSCCHHH
T ss_pred             HHHHHHH--HHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCc---------eEEEecCCCCCHHH
Confidence            9998776  8888999999999877777776643322111222  56666632 222         22222   358899


Q ss_pred             HHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy755          133 LEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEA  177 (183)
Q Consensus       133 ~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~  177 (183)
                      ++.+.++.+.+|+.++.+.+ ..+.++..+...+....+..+.|+
T Consensus       475 ~~~~~~~~~~lgK~pV~vkd-~pGFi~NRi~~~~~~ea~~l~~eG  518 (742)
T 3zwc_A          475 IATVMSLSKKIGKIGVVVGN-CYGFVGNRMLAPYYNQGFFLLEEG  518 (742)
T ss_dssp             HHHHHHHHHHTTCEEEECCC-STTTTHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCCCCcccCC-CCCccHHHHhhHHHHHHHHHHHcC
Confidence            99999999999999998865 557888777766666666555553

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=99.33  E-value=1.3e-11  Score=95.48  Aligned_cols=155  Identities=17%  Similarity=0.209  Sum_probs=110.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-------------ccCCHHHHhccCCEEEEecCChHHHHHHhcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-------------MALSLSTLASGAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      ||+.+|..|+++|++|++| +++++++.+.+.|..             ..++.++ +.++|+||++||.. +++.++   
T Consensus        30 ~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilavk~~-~~~~~l---  103 (318)
T 3hwr_A           30 VGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCVKST-DTQSAA---  103 (318)
T ss_dssp             HHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECCCGG-GHHHHH---
T ss_pred             HHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEcccc-cHHHHH---
Confidence            7999999999999999999 999888888876532             2344544 57899999999885 678887   


Q ss_pred             ccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEee-----cccCCHHHHh---cCceEEEecCCHHHHHHHHHH
Q psy755           68 DGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDA-----PVSGGTKAAQ---EATLTFMVGGDKSSLEKAKPI  139 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~l  139 (183)
                      +.+.+.++++++|+.+++..... ..+.+.++ .  ..+.+     ....+|..+.   .+.  +.++. .+..+.++++
T Consensus       104 ~~l~~~l~~~~~iv~~~nGi~~~-~~l~~~~~-~--~vl~g~~~~~a~~~gP~~~~~~~~g~--~~ig~-~~~~~~l~~~  176 (318)
T 3hwr_A          104 LAMKPALAKSALVLSLQNGVENA-DTLRSLLE-Q--EVAAAVVYVATEMAGPGHVRHHGRGE--LVIEP-TSHGANLAAI  176 (318)
T ss_dssp             HHHTTTSCTTCEEEEECSSSSHH-HHHHHHCC-S--EEEEEEEEEEEEEEETTEEEEEEEEE--EEECC-CTTTHHHHHH
T ss_pred             HHHHHhcCCCCEEEEeCCCCCcH-HHHHHHcC-C--cEEEEEEEEeEEEcCCeEEEEcCCce--EEEcC-CHHHHHHHHH
Confidence            88999999999999988876554 24444443 1  12221     1111222222   232  23343 3445789999


Q ss_pred             HHHhcCCeEEeCCcchHHHHHHHHHHHHH
Q psy755          140 LKCMGRNIVHCGDSGNGQVAKLCNNMLLG  168 (183)
Q Consensus       140 ~~~~g~~~~~~g~~g~a~~~k~~~~~~~~  168 (183)
                      |+..|.++++..+.-...+.|++.|....
T Consensus       177 l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n  205 (318)
T 3hwr_A          177 FAAAGVPVETSDNVRGALWAKLILNCAYN  205 (318)
T ss_dssp             HHHTTCCEEECSCHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCcEechHHHHHHHHHHHHHhhhh
Confidence            99999999888898889999999887543

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=99.27  E-value=9.2e-11  Score=90.38  Aligned_cols=159  Identities=13%  Similarity=0.127  Sum_probs=108.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc--------------ccCCHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN--------------MALSLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~--------------~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||+.+|..|+++|++|++|+|++  .+.+.+.|..              ..++.++ +..+|+||++||. .+++.++  
T Consensus        13 iG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~-~~~~~~l--   86 (312)
T 3hn2_A           13 LGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKT-FANSRYE--   86 (312)
T ss_dssp             THHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCG-GGGGGHH--
T ss_pred             HHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCC-CCcHHHH--
Confidence            79999999999999999999987  3666665532              1234444 6789999999987 5567777  


Q ss_pred             CccccccCCCCcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccCCHHHHh---cCceEEEe--cCCHHHHHHHH
Q psy755           67 SDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSGGTKAAQ---EATLTFMV--GGDKSSLEKAK  137 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~---~~~~~~~~--~g~~~~~~~~~  137 (183)
                       +.+.+.+.++++|+.+.+..... ..+.+.++..    +..++.+... +|..+.   .+...+-.  +.+.+..+.+.
T Consensus        87 -~~l~~~l~~~~~iv~l~nGi~~~-~~l~~~~~~~~v~~~~~~~~a~~~-~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~  163 (312)
T 3hn2_A           87 -ELIRPLVEEGTQILTLQNGLGNE-EALATLFGAERIIGGVAFLCSNRG-EPGEVHHLGAGRIILGEFLPRDTGRIEELA  163 (312)
T ss_dssp             -HHHGGGCCTTCEEEECCSSSSHH-HHHHHHTCGGGEEEEEEEEECCBC-SSSEEEECEEEEEEEEESSCCCSHHHHHHH
T ss_pred             -HHHHhhcCCCCEEEEecCCCCcH-HHHHHHCCCCcEEEEEEEeeeEEc-CCcEEEECCCCeEEEecCCCCccHHHHHHH
Confidence             88999999999999888876432 2444544432    1111111111 221111   23222221  12346668899


Q ss_pred             HHHHHhcCCeEEeCCcchHHHHHHHHHHHHH
Q psy755          138 PILKCMGRNIVHCGDSGNGQVAKLCNNMLLG  168 (183)
Q Consensus       138 ~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~  168 (183)
                      ++|+..|.++++..+.-...+-|++.|....
T Consensus       164 ~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n  194 (312)
T 3hn2_A          164 AMFRQAGVDCRTTDDLKRARWEKLVWNIPFN  194 (312)
T ss_dssp             HHHHHTTCCEEECSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCcEEChHHHHHHHHHHHHHHhHH
Confidence            9999999998888888889999999888643

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=99.26  E-value=3.3e-11  Score=93.20  Aligned_cols=158  Identities=15%  Similarity=0.129  Sum_probs=108.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCC---------------cccCCHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA---------------NMALSLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~---------------~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||+.+|..|++.|++|++|+|++  .+.+.+.|+               ..+++++++.+.+|+||++||.. +++.++ 
T Consensus        13 iG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK~~-~~~~~l-   88 (320)
T 3i83_A           13 IGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIKVV-EGADRV-   88 (320)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCCCC-TTCCHH-
T ss_pred             HHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecCCC-ChHHHH-
Confidence            69999999999999999999987  366655442               12345666556899999999885 466666 


Q ss_pred             CCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCC-----HHHHh-cCceEEEec----CCHHHHHH
Q psy755           66 GSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGG-----TKAAQ-EATLTFMVG----GDKSSLEK  135 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~~~~-~~~~~~~~~----g~~~~~~~  135 (183)
                        +.+.+.+.++++|+.+.+..... +.+.+.++..  +++.++.+.+     +.... .+.-.+.++    .+.+..+.
T Consensus        89 --~~l~~~l~~~t~Iv~~~nGi~~~-~~l~~~~~~~--~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~~~~~~~~~~  163 (320)
T 3i83_A           89 --GLLRDAVAPDTGIVLISNGIDIE-PEVAAAFPDN--EVISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVSERVKT  163 (320)
T ss_dssp             --HHHTTSCCTTCEEEEECSSSSCS-HHHHHHSTTS--CEEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSCCCHHHHH
T ss_pred             --HHHHhhcCCCCEEEEeCCCCChH-HHHHHHCCCC--cEEEEEEEeceEEcCCCEEEECCCCEEEEecCCCCccHHHHH
Confidence              78889999999999888776432 2344444432  3444432221     10000 111122232    34466788


Q ss_pred             HHHHHHHhcCCeEEeCCcchHHHHHHHHHHHH
Q psy755          136 AKPILKCMGRNIVHCGDSGNGQVAKLCNNMLL  167 (183)
Q Consensus       136 ~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~  167 (183)
                      +.++|+..|.++++..+.-...+.|++.|...
T Consensus       164 l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~  195 (320)
T 3i83_A          164 LAAAFEEAGIDGIATENITTARWQKCVWNAAF  195 (320)
T ss_dssp             HHHHHHHTTSCEEECSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCceECHHHHHHHHHHHHHHHhh
Confidence            99999999999988889999999999998643

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=99.26  E-value=3.6e-11  Score=93.99  Aligned_cols=100  Identities=18%  Similarity=0.249  Sum_probs=85.0

Q ss_pred             CcHHHHHHHH-hCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLL-KNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~-~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+.+|+.|. ..|++|++|||++++.+...+.|+...+++.+++++||+|++++|....++.++.  +++.+.++++.+
T Consensus       174 IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~--~~~l~~mk~gai  251 (348)
T 2w2k_A          174 IQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLID--EAFFAAMKPGSR  251 (348)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBC--HHHHHHSCTTEE
T ss_pred             HHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhh--HHHHhcCCCCCE
Confidence            7999999999 9999999999998876666666777666889999999999999999877777662  456678899999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcC
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g  102 (183)
                      ++|+++..+.+..++.+.+.+..
T Consensus       252 lin~srg~~vd~~aL~~aL~~~~  274 (348)
T 2w2k_A          252 IVNTARGPVISQDALIAALKSGK  274 (348)
T ss_dssp             EEECSCGGGBCHHHHHHHHHTTS
T ss_pred             EEECCCCchhCHHHHHHHHHhCC
Confidence            99999999999889998887643

>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}

Probab=99.26  E-value=3.2e-11  Score=95.14  Aligned_cols=175  Identities=14%  Similarity=0.075  Sum_probs=114.8

Q ss_pred             CcHHHHHHHHhCCC--------cEEEEcCCchh-----HHHHHHc--------------CCcccCCHHHHhccCCEEEEe
Q psy755            1 MGSHMARNLLKNGH--------DVIVYDKNTDA-----SQTLAKE--------------GANMALSLSTLASGAEFIISM   53 (183)
Q Consensus         1 mG~~iA~~l~~~g~--------~V~~~~~~~~~-----~~~~~~~--------------g~~~~~~~~~~~~~adiVi~~   53 (183)
                      ||++||..|+++|+        +|.+|.|+++.     .+.+...              ++..++++.++++++|+||++
T Consensus        45 WGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al~~ad~ii~a  124 (391)
T 4fgw_A           45 WGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSVKDVDIIVFN  124 (391)
T ss_dssp             HHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHHTTCSEEEEC
T ss_pred             HHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHHhcCCEEEEE
Confidence            79999999999875        49999998763     2333322              234567889999999999999


Q ss_pred             cCChHHHHHHhcCCccccccCCCCcEEEeccCCCch-h--HHHHHHHHHhc-CC--cEEeecccCCHHHHhcCceEEEec
Q psy755           54 LPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQ-V--PQTLSNLAREK-QI--TFLDAPVSGGTKAAQEATLTFMVG  127 (183)
Q Consensus        54 vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~-~--~~~~~~~~~~~-g~--~~~~~~~~~~~~~~~~~~~~~~~~  127 (183)
                      +|. +.++.++   +++.++++++..+|.++...-. +  ...+.+.+.+. +.  ..+..|-+.........+.+.+.+
T Consensus       125 vPs-~~~r~~l---~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~~~~vLsGPs~A~EVa~~~pta~~iA~  200 (391)
T 4fgw_A          125 IPH-QFLPRIC---SQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGIQCGALSGANIATEVAQEHWSETTVAY  200 (391)
T ss_dssp             SCG-GGHHHHH---HHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCCEEEEEECSCCHHHHHTTCCEEEEEEC
T ss_pred             CCh-hhhHHHH---HHhccccCCCceeEEeccccccccccchhHHHHHHHHhCccceeccCCchHHHhhcCCCceEEEEe
Confidence            987 7789988   8999999999999998876421 1  11222323222 32  234455544444434444444433


Q ss_pred             CCH---------HHHHHHHHHHHHhcCCeEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q psy755          128 GDK---------SSLEKAKPILKCMGRNIVHCGDSGNGQVAKLCNNMLLGVTMMGVAEAMNLG  181 (183)
Q Consensus       128 g~~---------~~~~~~~~l~~~~g~~~~~~g~~g~a~~~k~~~~~~~~~~~~~~~E~~~~~  181 (183)
                      .+.         ...+.++++|..=-.+++...|.-..++.-.+.|.+.-.  +++++++.++
T Consensus       201 ~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~DviGvElgGAlKNViAIA--aGi~dGlg~G  261 (391)
T 4fgw_A          201 HIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDVAGISICGALKNVVALG--CGFVEGLGWG  261 (391)
T ss_dssp             CCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCHHHHHHHHHHHHHHHHH--HHHHHHTTCH
T ss_pred             cChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCccceehHHHHHHHHHHH--HHHHhcCCCC
Confidence            222         223567777777667788888866688877777776654  5555555443

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=99.25  E-value=1.9e-11  Score=95.57  Aligned_cols=102  Identities=16%  Similarity=0.243  Sum_probs=77.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CC--------------cccCCHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GA--------------NMALSLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~--------------~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||..+|..|++.|++|++|||++++.+.+.+. +.              ...+++.+++.++|+||+++|... .+.++ 
T Consensus        15 ~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~~-~~~~~-   92 (359)
T 1bg6_A           15 GGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVPAIH-HASIA-   92 (359)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSCGGG-HHHHH-
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCCchH-HHHHH-
Confidence            68999999999999999999999998888765 21              245678888889999999999865 56776 


Q ss_pred             CCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcC---CcEEe
Q psy755           66 GSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQ---ITFLD  107 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g---~~~~~  107 (183)
                        +.+.+.++++++|+++.+..+.. ..+.+.+.+.+   +.|++
T Consensus        93 --~~l~~~l~~~~~vv~~~~~~~~~-~~~~~~l~~~~~~~v~~~~  134 (359)
T 1bg6_A           93 --ANIASYISEGQLIILNPGATGGA-LEFRKILRENGAPEVTIGE  134 (359)
T ss_dssp             --HHHGGGCCTTCEEEESSCCSSHH-HHHHHHHHHTTCCCCEEEE
T ss_pred             --HHHHHhCCCCCEEEEcCCCchHH-HHHHHHHHhcCCCCeEEEE
Confidence              78888999999999885533333 23455555544   34554

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=99.24  E-value=1e-11  Score=97.00  Aligned_cols=102  Identities=15%  Similarity=0.286  Sum_probs=89.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|++|...|++|++|||++...+.+.+.|+...+++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       175 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~--~~~l~~mk~gail  252 (351)
T 3jtm_A          175 IGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFN--KELIGKLKKGVLI  252 (351)
T ss_dssp             HHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBS--HHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhc--HHHHhcCCCCCEE
Confidence            69999999999999999999998777777777887778999999999999999998777777663  5667889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.+....+.
T Consensus       253 IN~aRG~~vde~aL~~aL~~g~i~  276 (351)
T 3jtm_A          253 VNNARGAIMERQAVVDAVESGHIG  276 (351)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSEE
T ss_pred             EECcCchhhCHHHHHHHHHhCCcc
Confidence            999999999999999999876544

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=99.23  E-value=6.8e-12  Score=95.55  Aligned_cols=106  Identities=14%  Similarity=0.244  Sum_probs=87.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|...|++|++|||+++..+.     ....+++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       133 IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~--~~~l~~mk~gail  205 (290)
T 3gvx_A          133 IGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DVISESPADLFRQSDFVLIAIPLTDKTRGMVN--SRLLANARKNLTI  205 (290)
T ss_dssp             HHHHHHHHHHHHTCEEEEECSSCCCTTC-----SEECSSHHHHHHHCSEEEECCCCCTTTTTCBS--HHHHTTCCTTCEE
T ss_pred             hhHHHHHHHHhhCcEEEEEecccccccc-----ccccCChHHHhhccCeEEEEeeccccchhhhh--HHHHhhhhcCceE
Confidence            6999999999999999999999875432     34566899999999999999998777777662  5667889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGG  113 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  113 (183)
                      ||+++..+.+..++.+.+++.++....-.++..
T Consensus       206 IN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~  238 (290)
T 3gvx_A          206 VNVARADVVSKPDMIGFLKERSDVWYLSDVWWN  238 (290)
T ss_dssp             EECSCGGGBCHHHHHHHHHHCTTCEEEESCCTT
T ss_pred             EEeehhcccCCcchhhhhhhccceEEeeccccC
Confidence            999999999999999999887666555445443

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=99.21  E-value=4.8e-11  Score=92.67  Aligned_cols=100  Identities=19%  Similarity=0.238  Sum_probs=83.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||++++.+.+.+.|+... ++.+++++||+|++++|.+..++.++.  +++.+.++++.++
T Consensus       166 iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~--~~~~~~mk~gail  242 (330)
T 2gcg_A          166 IGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPATEGLCN--KDFFQKMKETAVF  242 (330)
T ss_dssp             HHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBS--HHHHHHSCTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhC--HHHHhcCCCCcEE
Confidence            7899999999999999999999877666665566655 888999999999999998776666652  4566788999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      ||+++..+.+..++.+.+.+.++
T Consensus       243 In~srg~~v~~~aL~~aL~~~~i  265 (330)
T 2gcg_A          243 INISRGDVVNQDDLYQALASGKI  265 (330)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSS
T ss_pred             EECCCCcccCHHHHHHHHHcCCc
Confidence            99999999888889888877544

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=99.21  E-value=8.1e-14  Score=107.54  Aligned_cols=98  Identities=15%  Similarity=0.287  Sum_probs=79.5

Q ss_pred             CcHHHHHHHHhC-CC-cEEEEcCCchhHHHHHHc-C--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKN-GH-DVIVYDKNTDASQTLAKE-G--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~-g~-~V~~~~~~~~~~~~~~~~-g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||..++..|.+. |+ +|.+|||++++.+++.+. +  +..+++++++++++|+|++++|..   +.++   ..  +.++
T Consensus       146 ~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~v~---~~--~~l~  217 (312)
T 2i99_A          146 QAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EPIL---FG--EWVK  217 (312)
T ss_dssp             HHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SCCB---CG--GGSC
T ss_pred             HHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Cccc---CH--HHcC
Confidence            688999999876 76 899999999999888765 5  666788999999999999999863   2333   22  5788


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +|++|+|+++..|.. ..+.+.+.+++..|++
T Consensus       218 ~g~~vi~~g~~~p~~-~el~~~~~~~g~~~vD  248 (312)
T 2i99_A          218 PGAHINAVGASRPDW-RELDDELMKEAVLYVD  248 (312)
T ss_dssp             TTCEEEECCCCSTTC-CSBCHHHHHHSEEEES
T ss_pred             CCcEEEeCCCCCCCc-eeccHHHHhcCEEEEC
Confidence            999999999888865 5666677778889999

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=99.19  E-value=2e-11  Score=95.36  Aligned_cols=101  Identities=14%  Similarity=0.176  Sum_probs=86.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|++|++|||++. .+.+.+.|+...+++++++++||+|++++|....++.++.  .+..+.+++|.++
T Consensus       171 IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~--~~~l~~mk~gail  247 (352)
T 3gg9_A          171 IGQLVAGYGRAFGMNVLVWGRENS-KERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIIT--VADLTRMKPTALF  247 (352)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSHHH-HHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBC--HHHHTTSCTTCEE
T ss_pred             HHHHHHHHHHhCCCEEEEECCCCC-HHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhC--HHHHhhCCCCcEE
Confidence            699999999999999999999863 3555667887777999999999999999998877777662  5667889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.+++..+.
T Consensus       248 IN~aRg~~vd~~aL~~aL~~g~i~  271 (352)
T 3gg9_A          248 VNTSRAELVEENGMVTALNRGRPG  271 (352)
T ss_dssp             EECSCGGGBCTTHHHHHHHHTSSS
T ss_pred             EECCCchhhcHHHHHHHHHhCCcc
Confidence            999999999999999999887654

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=99.19  E-value=6.4e-11  Score=91.88  Aligned_cols=101  Identities=20%  Similarity=0.277  Sum_probs=85.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||++.+.+.....|.... ++.++++.||+|++++|....++.++.  ++..+.+++|.++
T Consensus       156 IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~gail  232 (330)
T 4e5n_A          156 IGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQV-ACSELFASSDFILLALPLNADTLHLVN--AELLALVRPGALL  232 (330)
T ss_dssp             HHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEEC-CHHHHHHHCSEEEECCCCSTTTTTCBC--HHHHTTSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeC-CHHHHHhhCCEEEEcCCCCHHHHHHhC--HHHHhhCCCCcEE
Confidence            6999999999999999999999865555555676544 899999999999999998777777662  5677889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||++++...+..++.+.+....+.
T Consensus       233 IN~arg~~vd~~aL~~aL~~g~i~  256 (330)
T 4e5n_A          233 VNPCRGSVVDEAAVLAALERGQLG  256 (330)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSEE
T ss_pred             EECCCCchhCHHHHHHHHHhCCcc
Confidence            999999999999999999877554

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=99.17  E-value=1.2e-10  Score=90.51  Aligned_cols=100  Identities=16%  Similarity=0.259  Sum_probs=83.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||++++ +.....|+.. .++.+++++||+|++++|.+..++.++.  +++.+.++++.++
T Consensus       161 iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~--~~~~~~mk~~ail  236 (334)
T 2dbq_A          161 IGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-KPLEDLLRESDFVVLAVPLTRETYHLIN--EERLKLMKKTAIL  236 (334)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBC--HHHHHHSCTTCEE
T ss_pred             HHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-CCHHHHHhhCCEEEECCCCChHHHHhhC--HHHHhcCCCCcEE
Confidence            7999999999999999999999987 5555556654 4888999999999999999876766652  4566789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++..+.+..++.+.+....+.
T Consensus       237 In~srg~~v~~~aL~~aL~~~~i~  260 (334)
T 2dbq_A          237 INIARGKVVDTNALVKALKEGWIA  260 (334)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSSS
T ss_pred             EECCCCcccCHHHHHHHHHhCCee
Confidence            999999988888888888775443

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=99.16  E-value=4.9e-11  Score=92.92  Aligned_cols=100  Identities=17%  Similarity=0.203  Sum_probs=84.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+++...|++|++|||++...+...  +....+++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       184 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~--~~~l~~mk~gail  259 (345)
T 4g2n_A          184 IGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLD--HDRIAKIPEGAVV  259 (345)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBC--HHHHHHSCTTEEE
T ss_pred             hHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhC--HHHHhhCCCCcEE
Confidence            699999999999999999999976544322  666667999999999999999998777777662  5667889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.+....+.
T Consensus       260 IN~aRG~~vde~aL~~aL~~g~i~  283 (345)
T 4g2n_A          260 INISRGDLINDDALIEALRSKHLF  283 (345)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSEE
T ss_pred             EECCCCchhCHHHHHHHHHhCCce
Confidence            999999999999999988775443

>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*

Probab=99.16  E-value=1.9e-10  Score=94.62  Aligned_cols=140  Identities=20%  Similarity=0.342  Sum_probs=101.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|++|.+.|++|++||+++.. +.+.+.|+... ++.+++++||+|++++|....++.++.  +++.+.+++|.++
T Consensus       153 IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~--~~~~~~~k~g~il  228 (529)
T 1ygy_A          153 IGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLGIELL-SLDDLLARADFISVHLPKTPETAGLID--KEALAKTKPGVII  228 (529)
T ss_dssp             HHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBC--HHHHTTSCTTEEE
T ss_pred             HHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCcEEc-CHHHHHhcCCEEEECCCCchHHHHHhC--HHHHhCCCCCCEE
Confidence            6899999999999999999998853 44556677665 899999999999999999767777762  3367789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC-----CcEEe-ecccCCHHHHhcCceEEEe---c-CCHHHHHH-----HHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ-----ITFLD-APVSGGTKAAQEATLTFMV---G-GDKSSLEK-----AKPILKCMGR  145 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g-----~~~~~-~~~~~~~~~~~~~~~~~~~---~-g~~~~~~~-----~~~l~~~~g~  145 (183)
                      +|+++..+.+..++.+.+.+..     ..++. +|+...+- ..... ++++   + .+.++.+.     ++++++.++.
T Consensus       229 in~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L-~~~~~-vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~  306 (529)
T 1ygy_A          229 VNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPL-FELAQ-VVVTPHLGASTAEAQDRAGTDVAESVRLALAG  306 (529)
T ss_dssp             EECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGG-GGCTT-EEECSSCSSCBHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchH-HhCCC-EEEccccCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999999888888887642     22333 55543322 12233 5554   3 35555543     6677777765


Q ss_pred             C
Q psy755          146 N  146 (183)
Q Consensus       146 ~  146 (183)
                      .
T Consensus       307 ~  307 (529)
T 1ygy_A          307 E  307 (529)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=99.15  E-value=6.7e-11  Score=91.98  Aligned_cols=97  Identities=18%  Similarity=0.173  Sum_probs=62.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+++...|++|++|||++.+     ..+.....++.+++++||+|++++|....++.++.  ++..+.++++.++
T Consensus       182 IG~~vA~~l~~~G~~V~~~dr~~~~-----~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~--~~~l~~mk~gail  254 (340)
T 4dgs_A          182 IGRALASRAEAFGMSVRYWNRSTLS-----GVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVD--ASLLQALGPEGIV  254 (340)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSSCCT-----TSCCEECSSHHHHHHTCSEEEECC----------C--HHHHHHTTTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCccc-----ccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhh--HHHHhcCCCCCEE
Confidence            7999999999999999999999875     22445567899999999999999998888888763  6677889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.++...+.
T Consensus       255 IN~aRG~vvde~aL~~aL~~g~i~  278 (340)
T 4dgs_A          255 VNVARGNVVDEDALIEALKSGTIA  278 (340)
T ss_dssp             EECSCC--------------CCSS
T ss_pred             EECCCCcccCHHHHHHHHHcCCce
Confidence            999999999999999988776444

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=99.15  E-value=1.1e-10  Score=89.73  Aligned_cols=99  Identities=18%  Similarity=0.265  Sum_probs=82.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||++++ +.+.+.|+... ++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       153 IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~ell~~aDvV~l~~p~~~~t~~li~--~~~l~~mk~ga~l  228 (307)
T 1wwk_A          153 IGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV-DLETLLKESDVVTIHVPLVESTYHLIN--EERLKLMKKTAIL  228 (307)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBC--HHHHHHSCTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc-CHHHHHhhCCEEEEecCCChHHhhhcC--HHHHhcCCCCeEE
Confidence            6999999999999999999999887 45555676544 889999999999999998776666652  4566789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      ||+++....+..++.+.+++..+
T Consensus       229 in~arg~~vd~~aL~~aL~~g~i  251 (307)
T 1wwk_A          229 INTSRGPVVDTNALVKALKEGWI  251 (307)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSS
T ss_pred             EECCCCcccCHHHHHHHHHhCCC
Confidence            99999988888888888877543

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=99.14  E-value=5.7e-11  Score=92.70  Aligned_cols=101  Identities=15%  Similarity=0.183  Sum_probs=83.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++||+++++. .....|+....++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       179 IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~gail  255 (347)
T 1mx3_A          179 VGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN--DFTVKQMRQGAFL  255 (347)
T ss_dssp             HHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBS--HHHHTTSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcchh-hHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhH--HHHHhcCCCCCEE
Confidence            79999999999999999999987652 23344766666899999999999999998777777662  4566788999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++..+.+..++.+.+.+.++.
T Consensus       256 IN~arg~~vd~~aL~~aL~~g~i~  279 (347)
T 1mx3_A          256 VNTARGGLVDEKALAQALKEGRIR  279 (347)
T ss_dssp             EECSCTTSBCHHHHHHHHHHTSEE
T ss_pred             EECCCChHHhHHHHHHHHHhCCCc
Confidence            999999999999999998876543

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=99.14  E-value=5.2e-11  Score=92.46  Aligned_cols=97  Identities=11%  Similarity=0.153  Sum_probs=81.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||+++..+     +.....++.+++++||+|++++|....++.++.  ++..+.++++.++
T Consensus       175 iG~~vA~~l~~~G~~V~~~dr~~~~~~-----g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~--~~~l~~mk~gail  247 (333)
T 3ba1_A          175 IGLAVAERAEAFDCPISYFSRSKKPNT-----NYTYYGSVVELASNSDILVVACPLTPETTHIIN--REVIDALGPKGVL  247 (333)
T ss_dssp             HHHHHHHHHHTTTCCEEEECSSCCTTC-----CSEEESCHHHHHHTCSEEEECSCCCGGGTTCBC--HHHHHHHCTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCchhcc-----CceecCCHHHHHhcCCEEEEecCCChHHHHHhh--HHHHhcCCCCCEE
Confidence            799999999999999999999987532     555567899999999999999999777777652  4566778999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++..+.+..++.+.+.+..+.
T Consensus       248 In~srG~~vd~~aL~~aL~~g~i~  271 (333)
T 3ba1_A          248 INIGRGPHVDEPELVSALVEGRLG  271 (333)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSSC
T ss_pred             EECCCCchhCHHHHHHHHHcCCCe
Confidence            999999999999999988875443

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=99.12  E-value=1e-10  Score=90.42  Aligned_cols=99  Identities=17%  Similarity=0.220  Sum_probs=82.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcC-CchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDK-NTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+++|+.|...|++|++||+ ++++ +.+.+.|+...+++++++++||+|++++|....++.++.  ++..+.+++|.+
T Consensus       157 IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~--~~~l~~mk~gai  233 (320)
T 1gdh_A          157 IGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN--KATIKSLPQGAI  233 (320)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS--HHHHTTSCTTEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcC--HHHHhhCCCCcE
Confidence            799999999999999999999 8876 344555776666899999999999999998766666652  446678999999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcC
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g  102 (183)
                      +||+++....+..++.+.+++..
T Consensus       234 lIn~arg~~vd~~aL~~aL~~g~  256 (320)
T 1gdh_A          234 VVNTARGDLVDNELVVAALEAGR  256 (320)
T ss_dssp             EEECSCGGGBCHHHHHHHHHHTS
T ss_pred             EEECCCCcccCHHHHHHHHHhCC
Confidence            99999988888888888887653

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=99.12  E-value=9e-11  Score=92.84  Aligned_cols=100  Identities=10%  Similarity=0.084  Sum_probs=84.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||++.+.+...+.|+....++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       202 IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~--~~~l~~mk~gail  279 (393)
T 2nac_A          202 IGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIN--DETLKLFKRGAYI  279 (393)
T ss_dssp             HHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBS--HHHHTTSCTTEEE
T ss_pred             HHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhh--HHHHhhCCCCCEE
Confidence            79999999999999999999998766666666777667899999999999999998766766652  4566789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      ||+++....+..++.+.+.+..
T Consensus       280 IN~aRG~~vde~aL~~aL~~g~  301 (393)
T 2nac_A          280 VNTARGKLCDRDAVARALESGR  301 (393)
T ss_dssp             EECSCGGGBCHHHHHHHHHTTS
T ss_pred             EECCCchHhhHHHHHHHHHcCC
Confidence            9999999989889999887653

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=99.11  E-value=1.8e-10  Score=89.51  Aligned_cols=98  Identities=20%  Similarity=0.239  Sum_probs=82.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|++|++||++++. +.+...|+.. .++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       176 IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~gail  251 (335)
T 2g76_A          176 IGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLN--DNTFAQCKKGVRV  251 (335)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE-CCHHHHGGGCSEEEECCCCCTTTTTSBC--HHHHTTSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-CCHHHHHhcCCEEEEecCCCHHHHHhhC--HHHHhhCCCCcEE
Confidence            6899999999999999999998876 3455557654 4899999999999999999877777662  4567889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      ||+++....+..++.+.+++..
T Consensus       252 IN~arg~vvd~~aL~~aL~~g~  273 (335)
T 2g76_A          252 VNCARGGIVDEGALLRALQSGQ  273 (335)
T ss_dssp             EECSCTTSBCHHHHHHHHHHTS
T ss_pred             EECCCccccCHHHHHHHHHhCC
Confidence            9999999999889998888754

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=99.11  E-value=9.2e-11  Score=92.16  Aligned_cols=101  Identities=15%  Similarity=0.226  Sum_probs=86.1

Q ss_pred             CcHHHHHHHHhCCCc-EEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHD-VIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~-V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+.+|+.|...|++ |++|||++.+.+.+.+.|+...+++++++++||+|++++|....++.++.  ++..+.+++|.+
T Consensus       175 IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~ga~  252 (364)
T 2j6i_A          175 IGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLIN--KELLSKFKKGAW  252 (364)
T ss_dssp             HHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBC--HHHHTTSCTTEE
T ss_pred             HHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhC--HHHHhhCCCCCE
Confidence            689999999999997 99999998776666666766667899999999999999999877777652  456678999999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCC
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      +||+++....+..++.+.+....+
T Consensus       253 lIn~arG~~vd~~aL~~aL~~g~i  276 (364)
T 2j6i_A          253 LVNTARGAICVAEDVAAALESGQL  276 (364)
T ss_dssp             EEECSCGGGBCHHHHHHHHHHTSE
T ss_pred             EEECCCCchhCHHHHHHHHHcCCC
Confidence            999999999999999999887643

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=99.10  E-value=4.5e-11  Score=92.34  Aligned_cols=100  Identities=19%  Similarity=0.329  Sum_probs=82.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||++...+.+  .+.....++++++++||+|++++|....++.++.  .+..+.+++|.++
T Consensus       151 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~--~~~l~~mk~gail  226 (324)
T 3hg7_A          151 IGQHIAHTGKHFGMKVLGVSRSGRERAGF--DQVYQLPALNKMLAQADVIVSVLPATRETHHLFT--ASRFEHCKPGAIL  226 (324)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCCCTTC--SEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBC--TTTTTCSCTTCEE
T ss_pred             HHHHHHHHHHhCCCEEEEEcCChHHhhhh--hcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhH--HHHHhcCCCCcEE
Confidence            69999999999999999999998543221  1122346889999999999999998777777763  5667789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.+.+..+.
T Consensus       227 IN~aRG~~vde~aL~~aL~~g~i~  250 (324)
T 3hg7_A          227 FNVGRGNAINEGDLLTALRTGKLG  250 (324)
T ss_dssp             EECSCGGGBCHHHHHHHHHTTSSS
T ss_pred             EECCCchhhCHHHHHHHHHcCCce
Confidence            999999999999999999876554

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=99.10  E-value=2.7e-11  Score=93.64  Aligned_cols=108  Identities=14%  Similarity=0.210  Sum_probs=85.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||+++..+.+..  .....++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       148 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~--~~~l~~mk~gail  223 (324)
T 3evt_A          148 IGQSLAAKASALGMHVIGVNTTGHPADHFHE--TVAFTATADALATANFIVNALPLTPTTHHLFS--TELFQQTKQQPML  223 (324)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCCCCTTCSE--EEEGGGCHHHHHHCSEEEECCCCCGGGTTCBS--HHHHHTCCSCCEE
T ss_pred             HHHHHHHHHHhCCCEEEEECCCcchhHhHhh--ccccCCHHHHHhhCCEEEEcCCCchHHHHhcC--HHHHhcCCCCCEE
Confidence            6999999999999999999999865432211  12245788999999999999998877777763  5667789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSG  112 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~  112 (183)
                      ||++++...+..++.+.+.+..+......++.
T Consensus       224 IN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~  255 (324)
T 3evt_A          224 INIGRGPAVDTTALMTALDHHQLSMAALDVTE  255 (324)
T ss_dssp             EECSCGGGBCHHHHHHHHHTTSCSEEEESSCS
T ss_pred             EEcCCChhhhHHHHHHHHHhCCceEEEeCCCC
Confidence            99999999999999999987665543333433

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=99.08  E-value=1.3e-10  Score=89.50  Aligned_cols=98  Identities=19%  Similarity=0.214  Sum_probs=81.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||++++. .+.+.|... .++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       153 IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~--~~~l~~mk~ga~l  228 (313)
T 2ekl_A          153 IGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA-VSLEELLKNSDVISLHVTVSKDAKPIID--YPQFELMKDNVII  228 (313)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTSCCSBC--HHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee-cCHHHHHhhCCEEEEeccCChHHHHhhC--HHHHhcCCCCCEE
Confidence            79999999999999999999998864 345567664 4889999999999999998776666552  4456778999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      ||+++..+.+..++.+.+++.+
T Consensus       229 In~arg~~vd~~aL~~aL~~g~  250 (313)
T 2ekl_A          229 VNTSRAVAVNGKALLDYIKKGK  250 (313)
T ss_dssp             EESSCGGGBCHHHHHHHHHTTC
T ss_pred             EECCCCcccCHHHHHHHHHcCC
Confidence            9999999999889999887754

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=99.07  E-value=1.8e-10  Score=89.58  Aligned_cols=98  Identities=12%  Similarity=0.254  Sum_probs=80.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||++++ +...+.|+... ++.+++++||+|++++|....++.++.  +++.+.++++ ++
T Consensus       157 iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~--~~~~~~mk~g-il  231 (333)
T 2d0i_A          157 IGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYM-DIDELLEKSDIVILALPLTRDTYHIIN--EERVKKLEGK-YL  231 (333)
T ss_dssp             HHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEEC-CHHHHHHHCSEEEECCCCCTTTTTSBC--HHHHHHTBTC-EE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceec-CHHHHHhhCCEEEEcCCCChHHHHHhC--HHHHhhCCCC-EE
Confidence            7999999999999999999999986 44445565544 888989999999999999867777762  3456788899 99


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      +|+++....+..++.+.+....+
T Consensus       232 in~srg~~vd~~aL~~aL~~~~i  254 (333)
T 2d0i_A          232 VNIGRGALVDEKAVTEAIKQGKL  254 (333)
T ss_dssp             EECSCGGGBCHHHHHHHHHTTCB
T ss_pred             EECCCCcccCHHHHHHHHHcCCc
Confidence            99999998888888888876433

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=99.05  E-value=3.5e-10  Score=88.62  Aligned_cols=100  Identities=17%  Similarity=0.187  Sum_probs=82.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|++|++||+++. .+.+...|+.. .+++++++.||+|++++|....++.++.  .+..+.+++|.++
T Consensus       187 IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~--~~~l~~mk~gail  262 (365)
T 4hy3_A          187 LGKALRRVLSGFRARIRVFDPWLP-RSMLEENGVEP-ASLEDVLTKSDFIFVVAAVTSENKRFLG--AEAFSSMRRGAAF  262 (365)
T ss_dssp             HHHHHHHHHTTSCCEEEEECSSSC-HHHHHHTTCEE-CCHHHHHHSCSEEEECSCSSCC---CCC--HHHHHTSCTTCEE
T ss_pred             ccHHHHHhhhhCCCEEEEECCCCC-HHHHhhcCeee-CCHHHHHhcCCEEEEcCcCCHHHHhhcC--HHHHhcCCCCcEE
Confidence            699999999999999999999863 34445557654 4899999999999999999888888763  6677889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||++.+...+..++.+.++...+.
T Consensus       263 IN~aRG~~vde~aL~~aL~~g~i~  286 (365)
T 4hy3_A          263 ILLSRADVVDFDALMAAVSSGHIV  286 (365)
T ss_dssp             EECSCGGGSCHHHHHHHHHTTSSE
T ss_pred             EECcCCchhCHHHHHHHHHcCCce
Confidence            999999999999999998876544

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=99.05  E-value=1.7e-10  Score=88.56  Aligned_cols=96  Identities=11%  Similarity=0.139  Sum_probs=80.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|++|...|++|++|||+++  +.    +.....+++++++.||+|++++|....++.++.  ++..+.+++|.++
T Consensus       135 IG~~~A~~l~~~G~~V~~~dr~~~--~~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~--~~~l~~mk~gail  206 (303)
T 1qp8_A          135 IGTRVGKILAALGAQVRGFSRTPK--EG----PWRFTNSLEEALREARAAVCALPLNKHTRGLVK--YQHLALMAEDAVF  206 (303)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCC--CS----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBC--HHHHTTSCTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcc--cc----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhC--HHHHhhCCCCCEE
Confidence            799999999999999999999886  11    444456889999999999999999877777762  4677889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.+++..+.
T Consensus       207 in~srg~~vd~~aL~~aL~~g~i~  230 (303)
T 1qp8_A          207 VNVGRAEVLDRDGVLRILKERPQF  230 (303)
T ss_dssp             EECSCGGGBCHHHHHHHHHHCTTC
T ss_pred             EECCCCcccCHHHHHHHHHhCCce
Confidence            999999998988999888876543

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=99.04  E-value=2.3e-11  Score=90.14  Aligned_cols=153  Identities=16%  Similarity=0.148  Sum_probs=102.6

Q ss_pred             CcHHHHHHHHhCCCcE-EEEcCCchhHHHHHHcCCcccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDV-IVYDKNTDASQTLAKEGANMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V-~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+.+++.|.+.|+++ .+||+++ +.++       .++++++++ .++|+|++++|+....+.+       ...+..|+
T Consensus        11 mG~~~~~~l~~~g~~lv~v~d~~~-~~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~~~~~-------~~~l~~G~   75 (236)
T 2dc1_A           11 IGKFLAEWLERNGFEIAAILDVRG-EHEK-------MVRGIDEFLQREMDVAVEAASQQAVKDYA-------EKILKAGI   75 (236)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSSC-CCTT-------EESSHHHHTTSCCSEEEECSCHHHHHHHH-------HHHHHTTC
T ss_pred             HHHHHHHHHhcCCCEEEEEEecCc-chhh-------hcCCHHHHhcCCCCEEEECCCHHHHHHHH-------HHHHHCCC
Confidence            7899999999889997 6899986 3221       567888988 6999999999976444333       34567899


Q ss_pred             EEEeccCCCchhH---HHHHHHHHhcCCc-EEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCCcc
Q psy755           79 IVIDSSTVDPQVP---QTLSNLAREKQIT-FLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSG  154 (183)
Q Consensus        79 iiid~s~~~~~~~---~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~~g  154 (183)
                      .+++.++..+...   +.+.+..++.|.. +++.+..++......+..    +++...+...++.++..+.+.++.|+.+
T Consensus        76 ~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~G~~~  151 (236)
T 2dc1_A           76 DLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSASE----LIEEIVLTTRKNWRQFGRKGVIFEGSAS  151 (236)
T ss_dssp             EEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHHTGG----GEEEEEEEEEEEGGGTTSCEEEEEEEHH
T ss_pred             cEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHHhhc----cccEEEEEEEcChHHcCcceEEEeccHH
Confidence            9999887664433   6777777777877 678888888776665542    1111111111122344566778888754


Q ss_pred             hH-HHHHHHHHHHHHHHHH
Q psy755          155 NG-QVAKLCNNMLLGVTMM  172 (183)
Q Consensus       155 ~a-~~~k~~~~~~~~~~~~  172 (183)
                      .+ ..+|...|.+....++
T Consensus       152 ~~~~~~~~~~n~~~~~~~a  170 (236)
T 2dc1_A          152 EAAQKFPKNLNVAATLSIA  170 (236)
T ss_dssp             HHHHHSTTCCHHHHHHHHH
T ss_pred             HHHHHCCchHHHHHHHHHh
Confidence            44 4667667777655544

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=99.03  E-value=3.8e-10  Score=87.85  Aligned_cols=98  Identities=17%  Similarity=0.192  Sum_probs=81.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|++|++|||+++..   .+.+... .++++++++||+|++++|....++.++.  .+..+.+++|.++
T Consensus       159 IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~--~~~l~~mk~gail  232 (343)
T 2yq5_A          159 IGSAVAEIFSAMGAKVIAYDVAYNPE---FEPFLTY-TDFDTVLKEADIVSLHTPLFPSTENMIG--EKQLKEMKKSAYL  232 (343)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCGG---GTTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBC--HHHHHHSCTTCEE
T ss_pred             HHHHHHHHHhhCCCEEEEECCChhhh---hhccccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhh--HHHHhhCCCCcEE
Confidence            69999999999999999999998651   1223333 3899999999999999998777777663  5667789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||++++...+..++.+.+....+.
T Consensus       233 IN~aRg~~vd~~aL~~aL~~g~i~  256 (343)
T 2yq5_A          233 INCARGELVDTGALIKALQDGEIA  256 (343)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSSS
T ss_pred             EECCCChhhhHHHHHHHHHcCCCc
Confidence            999999999999999999876543

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=99.02  E-value=6e-11  Score=91.43  Aligned_cols=100  Identities=12%  Similarity=0.197  Sum_probs=80.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||+++..+.+...  ....++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       150 IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~--~~~~~l~ell~~aDiV~l~~Plt~~t~~li~--~~~l~~mk~gail  225 (315)
T 3pp8_A          150 LGAKVAESLQAWGFPLRCWSRSRKSWPGVESY--VGREELRAFLNQTRVLINLLPNTAQTVGIIN--SELLDQLPDGAYV  225 (315)
T ss_dssp             HHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE--ESHHHHHHHHHTCSEEEECCCCCGGGTTCBS--HHHHTTSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh--cccCCHHHHHhhCCEEEEecCCchhhhhhcc--HHHHhhCCCCCEE
Confidence            69999999999999999999998754321110  1124788999999999999998877777762  5667889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||++++...+..++.+.+....+.
T Consensus       226 IN~aRG~~vd~~aL~~aL~~g~i~  249 (315)
T 3pp8_A          226 LNLARGVHVQEADLLAALDSGKLK  249 (315)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSEE
T ss_pred             EECCCChhhhHHHHHHHHHhCCcc
Confidence            999999999999999998776443

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=98.99  E-value=9.1e-10  Score=85.57  Aligned_cols=99  Identities=18%  Similarity=0.192  Sum_probs=81.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|++|++||+++++.  +. ......+++++++++||+|++++|....++.++.  +...+.+++|.++
T Consensus       157 IG~~~A~~l~~~G~~V~~~d~~~~~~--~~-~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~--~~~l~~mk~ga~l  231 (333)
T 1j4a_A          157 IGQVFMQIMEGFGAKVITYDIFRNPE--LE-KKGYYVDSLDDLYKQADVISLHVPDVPANVHMIN--DESIAKMKQDVVI  231 (333)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCHH--HH-HTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBS--HHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcchh--HH-hhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHh--HHHHhhCCCCcEE
Confidence            69999999999999999999998764  22 2344455899999999999999998777777652  4556789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.+++..+.
T Consensus       232 In~arg~~vd~~aL~~aL~~g~i~  255 (333)
T 1j4a_A          232 VNVSRGPLVDTDAVIRGLDSGKIF  255 (333)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSEE
T ss_pred             EECCCCcccCHHHHHHHHHhCCce
Confidence            999999999999999998876443

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=98.99  E-value=3.9e-10  Score=89.60  Aligned_cols=98  Identities=18%  Similarity=0.264  Sum_probs=77.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|++|++||+++....    .+.....++++++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       167 IG~~vA~~l~~~G~~V~~yd~~~~~~~----~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~--~~~l~~mk~gail  240 (416)
T 3k5p_A          167 IGSQVGNLAESLGMTVRYYDTSDKLQY----GNVKPAASLDELLKTSDVVSLHVPSSKSTSKLIT--EAKLRKMKKGAFL  240 (416)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTCCCCB----TTBEECSSHHHHHHHCSEEEECCCC-----CCBC--HHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCcchhcc----cCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcC--HHHHhhCCCCcEE
Confidence            699999999999999999999865321    1334567899999999999999999888877762  5667789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.+....+.
T Consensus       241 IN~aRG~vvd~~aL~~aL~~g~i~  264 (416)
T 3k5p_A          241 INNARGSDVDLEALAKVLQEGHLA  264 (416)
T ss_dssp             EECSCTTSBCHHHHHHHHHTTSEE
T ss_pred             EECCCChhhhHHHHHHHHHcCCcc
Confidence            999999999999999998765443

>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}

Probab=98.96  E-value=4.4e-10  Score=88.38  Aligned_cols=100  Identities=20%  Similarity=0.221  Sum_probs=81.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHH----HHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQD----VLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~----~~~v~~~~~~l~~~l~~   76 (183)
                      ||+.+|++|...|++|.+||++.+...     ......++++++++||+|++++|....    ++.++.  .+..+.+++
T Consensus       130 IG~~vA~~l~a~G~~V~~~d~~~~~~~-----~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~--~~~l~~mk~  202 (381)
T 3oet_A          130 VGSRLQTRLEALGIRTLLCDPPRAARG-----DEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLAD--ETLIRRLKP  202 (381)
T ss_dssp             HHHHHHHHHHHTTCEEEEECHHHHHTT-----CCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBC--HHHHHHSCT
T ss_pred             HHHHHHHHHHHCCCEEEEECCChHHhc-----cCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcC--HHHHhcCCC
Confidence            699999999999999999998543321     233456899999999999999998776    666652  566778999


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |.++||++.+...+..++.+.+....+....
T Consensus       203 gailIN~aRG~vvde~aL~~aL~~g~i~gA~  233 (381)
T 3oet_A          203 GAILINACRGPVVDNAALLARLNAGQPLSVV  233 (381)
T ss_dssp             TEEEEECSCGGGBCHHHHHHHHHTTCCEEEE
T ss_pred             CcEEEECCCCcccCHHHHHHHHHhCCCeEEE
Confidence            9999999999999999999999876554333

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=98.95  E-value=1.6e-09  Score=83.45  Aligned_cols=90  Identities=19%  Similarity=0.214  Sum_probs=76.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|++|++|||++++.+      + ...++.+++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       155 IG~~~A~~l~~~G~~V~~~d~~~~~~~------~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~--~~~l~~mk~ga~l  225 (311)
T 2cuk_A          155 IGQAVAKRALAFGMRVVYHARTPKPLP------Y-PFLSLEELLKEADVVSLHTPLTPETHRLLN--RERLFAMKRGAIL  225 (311)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCSSS------S-CBCCHHHHHHHCSEEEECCCCCTTTTTCBC--HHHHTTSCTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCcccc------c-ccCCHHHHHhhCCEEEEeCCCChHHHhhcC--HHHHhhCCCCcEE
Confidence            799999999999999999999987643      2 345889999999999999999876777651  3566788999999


Q ss_pred             EeccCCCchhHHHHHHHHH
Q psy755           81 IDSSTVDPQVPQTLSNLAR   99 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~   99 (183)
                      ||+++....+..++.+.++
T Consensus       226 in~srg~~vd~~aL~~aL~  244 (311)
T 2cuk_A          226 LNTARGALVDTEALVEALR  244 (311)
T ss_dssp             EECSCGGGBCHHHHHHHHT
T ss_pred             EECCCCCccCHHHHHHHHh
Confidence            9999998888888888887

>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*

Probab=98.94  E-value=8e-10  Score=87.88  Aligned_cols=96  Identities=18%  Similarity=0.207  Sum_probs=80.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+++...|++|++||+++...    ..+.....+++++++.||+|++++|....++.++.  ++..+.+++|.++
T Consensus       156 IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~--~~~l~~mk~ga~l  229 (404)
T 1sc6_A          156 IGTQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMG--AKEISLMKPGSLL  229 (404)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBC--HHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhh--HHHHhhcCCCeEE
Confidence            68999999999999999999987542    11345566899999999999999999887777762  5567789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      ||+++....+..++.+.++...
T Consensus       230 IN~aRg~~vd~~aL~~aL~~g~  251 (404)
T 1sc6_A          230 INASRGTVVDIPALADALASKH  251 (404)
T ss_dssp             EECSCSSSBCHHHHHHHHHTTS
T ss_pred             EECCCChHHhHHHHHHHHHcCC
Confidence            9999999999999999887653

>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*

Probab=98.90  E-value=1.8e-09  Score=86.78  Aligned_cols=140  Identities=18%  Similarity=0.205  Sum_probs=94.3

Q ss_pred             CcHHHHHHHHhC------CCcEEEEcCC-chhHHHHHHcCCcc----cCCHHHHhccCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKN------GHDVIVYDKN-TDASQTLAKEGANM----ALSLSTLASGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      ||.++|++|.+.      |++|++++++ +...+.+.+.|+..    ..++.+++++||+||+++|+... ..++   ++
T Consensus        65 MG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~-~eVl---~e  140 (525)
T 3fr7_A           65 QGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQ-ADNY---EK  140 (525)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHH-HHHH---HH
T ss_pred             HHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHHH-HHHH---HH
Confidence            799999999999      9998877655 44566677778765    26889999999999999998554 5666   68


Q ss_pred             ccccCCCCcEEEeccCCCchhHHHHHH--HHHhcCCcEEe-ecccCCHH----HH-h-----cCceEEEe-c--CCHHHH
Q psy755           70 ILKHAKPGVIVIDSSTVDPQVPQTLSN--LAREKQITFLD-APVSGGTK----AA-Q-----EATLTFMV-G--GDKSSL  133 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~~~~~~~--~~~~~g~~~~~-~~~~~~~~----~~-~-----~~~~~~~~-~--g~~~~~  133 (183)
                      +.+.+++|++|+.+.+.   ....+.+  .....++.++- +|-..+..    .. .     .|-..+++ .  .+.+..
T Consensus       141 I~p~LK~GaILs~AaGf---~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~  217 (525)
T 3fr7_A          141 IFSHMKPNSILGLSHGF---LLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRAT  217 (525)
T ss_dssp             HHHHSCTTCEEEESSSH---HHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHH
T ss_pred             HHHhcCCCCeEEEeCCC---CHHHHhhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHH
Confidence            99999999997665552   1112221  01112444444 56555443    11 1     34432333 2  344788


Q ss_pred             HHHHHHHHHhcCCe
Q psy755          134 EKAKPILKCMGRNI  147 (183)
Q Consensus       134 ~~~~~l~~~~g~~~  147 (183)
                      +.+..++.++|...
T Consensus       218 e~alala~aiG~~~  231 (525)
T 3fr7_A          218 DVALGWSVALGSPF  231 (525)
T ss_dssp             HHHHHHHHHTTCSE
T ss_pred             HHHHHHHHHCCCCe
Confidence            89999999999864

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=98.89  E-value=2.8e-09  Score=82.80  Aligned_cols=98  Identities=18%  Similarity=0.245  Sum_probs=80.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|++|++|||++++.  + +.... ..+++++++.||+|++++|....++.++.  ++..+.+++|.++
T Consensus       156 IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~-~~~l~ell~~aDvV~~~~P~~~~t~~li~--~~~l~~mk~ga~l  229 (333)
T 1dxy_A          156 IGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPDFD-YVSLEDLFKQSDVIDLHVPGIEQNTHIIN--EAAFNLMKPGAIV  229 (333)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCSS--C-CTTCE-ECCHHHHHHHCSEEEECCCCCGGGTTSBC--HHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCcchh--h-Hhccc-cCCHHHHHhcCCEEEEcCCCchhHHHHhC--HHHHhhCCCCcEE
Confidence            68999999999999999999988653  1 12222 34889999999999999999887777652  4567789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.++...+.
T Consensus       230 In~srg~~vd~~aL~~aL~~g~i~  253 (333)
T 1dxy_A          230 INTARPNLIDTQAMLSNLKSGKLA  253 (333)
T ss_dssp             EECSCTTSBCHHHHHHHHHTTSEE
T ss_pred             EECCCCcccCHHHHHHHHHhCCcc
Confidence            999999999999999998876544

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=98.85  E-value=2.8e-09  Score=82.71  Aligned_cols=98  Identities=15%  Similarity=0.161  Sum_probs=79.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|++|++|||++++.  + +... ...++.+++++||+|++++|....++.++.  ++..+.+++|.++
T Consensus       157 IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~-~~~~l~ell~~aDvV~~~~p~t~~t~~li~--~~~l~~mk~ga~l  230 (331)
T 1xdw_A          157 IGRVAAQIFHGMGATVIGEDVFEIKG--I-EDYC-TQVSLDEVLEKSDIITIHAPYIKENGAVVT--RDFLKKMKDGAIL  230 (331)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCCS--C-TTTC-EECCHHHHHHHCSEEEECCCCCTTTCCSBC--HHHHHTSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCccHH--H-Hhcc-ccCCHHHHHhhCCEEEEecCCchHHHHHhC--HHHHhhCCCCcEE
Confidence            68999999999999999999988653  1 2222 244889999999999999998776666652  4566789999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ||+++....+..++.+.+.+..+.
T Consensus       231 in~srg~~vd~~aL~~aL~~g~i~  254 (331)
T 1xdw_A          231 VNCARGQLVDTEAVIEAVESGKLG  254 (331)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSEE
T ss_pred             EECCCcccccHHHHHHHHHhCCce
Confidence            999999999999999998876543

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=98.84  E-value=3.8e-10  Score=86.21  Aligned_cols=157  Identities=11%  Similarity=0.096  Sum_probs=103.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCC---cccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA---NMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||+.+|..|.+.|++|++|+|+++.++.....|.   ....+..+.+ ..+|+||++||. .+++.++   +.+.+.+.+
T Consensus        13 ~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~-~~~~~~l---~~l~~~l~~   88 (294)
T 3g17_A           13 VGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKT-HQLDAVI---PHLTYLAHE   88 (294)
T ss_dssp             HHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCG-GGHHHHG---GGHHHHEEE
T ss_pred             HHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCc-cCHHHHH---HHHHHhhCC
Confidence            6899999999999999999999775432211232   1122334444 789999999987 5688887   889999988


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhc----CCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCC
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREK----QITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~  152 (183)
                      +++|+.+.+.......     +...    +..++.+... +|..+..+...+.. ++.+..+.+.++|+.-|.++++..+
T Consensus        89 ~~~iv~~~nGi~~~~~-----~~~~~v~~g~~~~~a~~~-~pg~v~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~d  161 (294)
T 3g17_A           89 DTLIILAQNGYGQLEH-----IPFKNVCQAVVYISGQKK-GDVVTHFRDYQLRI-QDNALTRQFRDLVQDSQIDIVLEAN  161 (294)
T ss_dssp             EEEEEECCSSCCCGGG-----CCCSCEEECEEEEEEEEE-TTEEEEEEEEEEEE-ECSHHHHHHHHHTTTSSCEEEEESS
T ss_pred             CCEEEEeccCcccHhh-----CCCCcEEEEEEEEEEEEc-CCCEEEECCCEEec-CccHHHHHHHHHHHhCCCceEEChH
Confidence            9999988887655432     2211    1111111111 12111111112222 3455567888999988988888889


Q ss_pred             cchHHHHHHHHHHHHH
Q psy755          153 SGNGQVAKLCNNMLLG  168 (183)
Q Consensus       153 ~g~a~~~k~~~~~~~~  168 (183)
                      .-...+-|++.|....
T Consensus       162 i~~~~w~Kl~~N~~in  177 (294)
T 3g17_A          162 IQQAIWYKLLVNLGIN  177 (294)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8899999999998544

>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}

Probab=98.82  E-value=3.6e-09  Score=83.27  Aligned_cols=97  Identities=23%  Similarity=0.255  Sum_probs=79.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHH----HHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQD----VLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~----~~~v~~~~~~l~~~l~~   76 (183)
                      ||+.+|+.|...|++|++||++++..    ..+. ...++++++++||+|++++|....    ++.++.  ++..+.+++
T Consensus       127 IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g~-~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~--~~~l~~mk~  199 (380)
T 2o4c_A          127 VGGRLVEVLRGLGWKVLVCDPPRQAR----EPDG-EFVSLERLLAEADVISLHTPLNRDGEHPTRHLLD--EPRLAALRP  199 (380)
T ss_dssp             HHHHHHHHHHHTTCEEEEECHHHHHH----STTS-CCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBC--HHHHHTSCT
T ss_pred             HHHHHHHHHHHCCCEEEEEcCChhhh----ccCc-ccCCHHHHHHhCCEEEEeccCccccccchhhhcC--HHHHhhCCC
Confidence            68999999999999999999876532    2233 345899999999999999998776    666652  556788999


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCc
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      |.++||+++....+..++.+.+.+..+.
T Consensus       200 gailIN~sRG~vvd~~aL~~aL~~g~i~  227 (380)
T 2o4c_A          200 GTWLVNASRGAVVDNQALRRLLEGGADL  227 (380)
T ss_dssp             TEEEEECSCGGGBCHHHHHHHHHTTCCE
T ss_pred             CcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence            9999999999999999999988876543

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=98.81  E-value=1.1e-08  Score=69.64  Aligned_cols=93  Identities=16%  Similarity=0.267  Sum_probs=72.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..++++|.+.||+|+.+|++.+.+     .|...+.++.|+.+..|++++++|+ .....++   +++.+ ...+.++
T Consensus        29 ~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~~~~s~~el~~~vDlvii~vp~-~~v~~v~---~~~~~-~g~~~i~   98 (138)
T 1y81_A           29 YGNIILKDLLSKGFEVLPVNPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPP-KVGLQVA---KEAVE-AGFKKLW   98 (138)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCH-HHHHHHH---HHHHH-TTCCEEE
T ss_pred             HHHHHHHHHHHCCCEEEEeCCCCCeE-----CCeeecCCHHHhCCCCCEEEEEeCH-HHHHHHH---HHHHH-cCCCEEE
Confidence            68899999999999977777665433     4777788999988899999999995 6677776   55554 4456677


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++.++.    .+++.+.+++.|+++++
T Consensus        99 ~~~~~~----~~~l~~~a~~~Gi~~ig  121 (138)
T 1y81_A           99 FQPGAE----SEEIRRFLEKAGVEYSF  121 (138)
T ss_dssp             ECTTSC----CHHHHHHHHHHTCEEEC
T ss_pred             EcCccH----HHHHHHHHHHCCCEEEc
Confidence            777653    46777778888999987

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=98.80  E-value=1.1e-08  Score=76.90  Aligned_cols=98  Identities=16%  Similarity=0.176  Sum_probs=73.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHH--HHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDV--LDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~--~~v~~~~~~l~~~l~~~   77 (183)
                      ||++++..|.+.|++|++|||++++.+.+.+. +.. .+++.+. +++|+||+++|.+...  ...+   .  .+.+++|
T Consensus       127 ~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l---~--~~~l~~g  199 (263)
T 2d5c_A          127 AGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSASPL---P--AELFPEE  199 (263)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCSS---C--GGGSCSS
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCCC---C--HHHcCCC
Confidence            68999999999999999999999988777654 544 4577777 8999999999986421  1111   1  3567889


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++|+|++.....+  .+.+.++++|..+++
T Consensus       200 ~~viD~~~~p~~t--~l~~~a~~~g~~~v~  227 (263)
T 2d5c_A          200 GAAVDLVYRPLWT--RFLREAKAKGLKVQT  227 (263)
T ss_dssp             SEEEESCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred             CEEEEeecCCccc--HHHHHHHHCcCEEEC
Confidence            9999998764333  366667777887776

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=98.77  E-value=5.1e-09  Score=79.27  Aligned_cols=99  Identities=17%  Similarity=0.232  Sum_probs=72.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc-cccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI-LKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l-~~~l~~~~   78 (183)
                      ||++++..|.+.|++|++|||++++.+.+.+. ++...+++.+.++++|+||.++|.+.. ..+.   ..+ .+.+++++
T Consensus       140 ~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~-~~~~---~~i~~~~l~~g~  215 (275)
T 2hk9_A          140 ASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLK-DEDP---EIFNYDLIKKDH  215 (275)
T ss_dssp             HHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSS-TTCC---CSSCGGGCCTTS
T ss_pred             HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCC-CCCC---CCCCHHHcCCCC
Confidence            68999999999999999999999988877654 544555778888999999999998642 1110   112 24678899


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +++|++. ...   .+.+...++|..+++
T Consensus       216 ~viDv~~-~~t---~ll~~a~~~g~~~v~  240 (275)
T 2hk9_A          216 VVVDIIY-KET---KLLKKAKEKGAKLLD  240 (275)
T ss_dssp             EEEESSS-SCC---HHHHHHHHTTCEEEC
T ss_pred             EEEEcCC-ChH---HHHHHHHHCcCEEEC
Confidence            9999998 322   234455567877776

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=98.76  E-value=2.4e-09  Score=82.27  Aligned_cols=158  Identities=11%  Similarity=0.058  Sum_probs=97.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCC----------HHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALS----------LSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      ||..+|..|. .|++|++|+|++++.+.+.+.|......          ..+....+|+||++||. .+++.++   +.+
T Consensus        13 ~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~-~~~~~~l---~~l   87 (307)
T 3ego_A           13 VGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQ-HQLQSVF---SSL   87 (307)
T ss_dssp             HHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCG-GGHHHHH---HHT
T ss_pred             HHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCH-HHHHHHH---HHh
Confidence            6899999999 9999999999999888888776533211          12345689999999986 5677777   777


Q ss_pred             cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccC-----CHH---HHhcCceEEEe-cCCHHHHHHHHHHHH
Q psy755           71 LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG-----GTK---AAQEATLTFMV-GGDKSSLEKAKPILK  141 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~---~~~~~~~~~~~-~g~~~~~~~~~~l~~  141 (183)
                      .+. .+++ |+.+.+..... +.+.+.++.  -+++.+...-     +|.   ....+...+-. .++.+..+.+.+.|+
T Consensus        88 ~~~-~~~~-ivs~~nGi~~~-e~l~~~~~~--~~vl~g~~~~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~l~~~l~  162 (307)
T 3ego_A           88 ERI-GKTN-ILFLQNGMGHI-HDLKDWHVG--HSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDDAEPDRLNILFQHN  162 (307)
T ss_dssp             TSS-CCCE-EEECCSSSHHH-HHHHTCCCS--CEEEEEEECCEEEECSSSEEEEEECCCEEEEECTTCCGGGGTTTTSSC
T ss_pred             hcC-CCCe-EEEecCCccHH-HHHHHhCCC--CcEEEEEEeeceEECCCCEEEEeeeeeEEEEeCCCCcHHHHHHHHHhh
Confidence            664 5556 78777766543 122222211  1222221110     111   11123323221 122333345555666


Q ss_pred             HhcCCeEEeCCcchHHHHHHHHHHHHH
Q psy755          142 CMGRNIVHCGDSGNGQVAKLCNNMLLG  168 (183)
Q Consensus       142 ~~g~~~~~~g~~g~a~~~k~~~~~~~~  168 (183)
                      .-|.++.+..+.-...+-|++.|....
T Consensus       163 ~ag~~~~~~~di~~~~W~Kl~~N~~~N  189 (307)
T 3ego_A          163 HSDFPIYYETDWYRLLTGKLIVNACIN  189 (307)
T ss_dssp             CTTSCEEECSCHHHHHHHHHHHHHHHH
T ss_pred             hCCCCcEechhHHHHHHHHHHHhhhhh
Confidence            667777778888889999999997543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=98.74  E-value=2.2e-08  Score=76.68  Aligned_cols=99  Identities=18%  Similarity=0.268  Sum_probs=74.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+.+++.|...|++|++|||++++.+.+.+.|...  ..++.++++++|+|++++|...     +  .+...+.++++.
T Consensus       168 iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~-----i--~~~~~~~mk~g~  240 (300)
T 2rir_A          168 TGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMI-----L--NQTVLSSMTPKT  240 (300)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCC-----B--CHHHHTTSCTTC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhh-----h--CHHHHHhCCCCC
Confidence            689999999999999999999998877666666543  3578888999999999999732     1  123446788999


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      +++|++.......  + +.....|..+++.|
T Consensus       241 ~lin~a~g~~~~~--~-~~a~~~G~~~i~~p  268 (300)
T 2rir_A          241 LILDLASRPGGTD--F-KYAEKQGIKALLAP  268 (300)
T ss_dssp             EEEECSSTTCSBC--H-HHHHHHTCEEEECC
T ss_pred             EEEEEeCCCCCcC--H-HHHHHCCCEEEECC
Confidence            9999997644432  2 44556688888766

>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*

Probab=98.66  E-value=3.7e-08  Score=78.33  Aligned_cols=84  Identities=11%  Similarity=0.129  Sum_probs=65.9

Q ss_pred             CcHHHHHHHHh-CCCcEEEEc---CCchhHHHHHHc-C---------C----------cccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLK-NGHDVIVYD---KNTDASQTLAKE-G---------A----------NMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~-~g~~V~~~~---~~~~~~~~~~~~-g---------~----------~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||..+|..|++ +|++|++|+   |++++++.+.+. +         .          ..++++.+++.++|+||++||.
T Consensus        13 ~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~Vilav~~   92 (404)
T 3c7a_A           13 GAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISGADVVILTVPA   92 (404)
T ss_dssp             HHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTTCSEEEECSCG
T ss_pred             HHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCCCCEEEEeCch
Confidence            79999999988 599999999   888877774332 2         1          1345777888899999999988


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCc
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDP   88 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~   88 (183)
                      .. .+.++   +++.+.++++++|++..+...
T Consensus        93 ~~-~~~v~---~~l~~~l~~~~ivv~~~~~~G  120 (404)
T 3c7a_A           93 FA-HEGYF---QAMAPYVQDSALIVGLPSQAG  120 (404)
T ss_dssp             GG-HHHHH---HHHTTTCCTTCEEEETTCCTT
T ss_pred             HH-HHHHH---HHHHhhCCCCcEEEEcCCCcc
Confidence            54 67777   889999999999998655443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.65  E-value=6.2e-08  Score=73.93  Aligned_cols=99  Identities=20%  Similarity=0.251  Sum_probs=72.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+.+|+.|...|++|++|||++++.+.+.+.|...  ..++.+.++++|+|++++|...     +  .++..+.++++.
T Consensus       166 iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~-----i--~~~~l~~mk~~~  238 (293)
T 3d4o_A          166 VGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALV-----V--TANVLAEMPSHT  238 (293)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCC-----B--CHHHHHHSCTTC
T ss_pred             HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHH-----h--CHHHHHhcCCCC
Confidence            689999999999999999999998877666666543  2467888999999999998632     1  123345678999


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      +++|++.......  + +.....|+.++..|
T Consensus       239 ~lin~ar~~~~~~--~-~~a~~~Gv~~~~~~  266 (293)
T 3d4o_A          239 FVIDLASKPGGTD--F-RYAEKRGIKALLVP  266 (293)
T ss_dssp             EEEECSSTTCSBC--H-HHHHHHTCEEEECC
T ss_pred             EEEEecCCCCCCC--H-HHHHHCCCEEEECC
Confidence            9999997544332  2 44455677766543

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=98.58  E-value=3e-08  Score=67.92  Aligned_cols=93  Identities=12%  Similarity=0.155  Sum_probs=70.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc--hhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT--DASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||..++++|.+.||+|+.+|++.  +.+     .|...+.++.|+....|++++++|+ .....++   +++.+ ...+.
T Consensus        28 ~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~G~~~~~sl~el~~~~Dlvii~vp~-~~v~~v~---~~~~~-~g~~~   97 (145)
T 2duw_A           28 PSYRVMKYLLDQGYHVIPVSPKVAGKTL-----LGQQGYATLADVPEKVDMVDVFRNS-EAAWGVA---QEAIA-IGAKT   97 (145)
T ss_dssp             HHHHHHHHHHHHTCCEEEECSSSTTSEE-----TTEECCSSTTTCSSCCSEEECCSCS-THHHHHH---HHHHH-HTCCE
T ss_pred             hHHHHHHHHHHCCCEEEEeCCccccccc-----CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH---HHHHH-cCCCE
Confidence            68899999999999977777665  333     3667777888888889999999996 6677776   55555 34566


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++++.++.    .+++.+.+++.|++++.
T Consensus        98 i~i~~~~~----~~~l~~~a~~~Gi~~ig  122 (145)
T 2duw_A           98 LWLQLGVI----NEQAAVLAREAGLSVVM  122 (145)
T ss_dssp             EECCTTCC----CHHHHHHHHTTTCEEEC
T ss_pred             EEEcCChH----HHHHHHHHHHcCCEEEc
Confidence            77765543    46777788888999985

>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}

Probab=98.57  E-value=1.4e-07  Score=73.18  Aligned_cols=98  Identities=20%  Similarity=0.264  Sum_probs=81.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|.+||+.+..  .....+.. ..++++++++||+|++++|....++.++.  ++....+++|.++
T Consensus       152 IG~~va~~~~~fg~~v~~~d~~~~~--~~~~~~~~-~~~l~ell~~sDivslh~Plt~~T~~li~--~~~l~~mk~~a~l  226 (334)
T 3kb6_A          152 IGSRVAMYGLAFGMKVLCYDVVKRE--DLKEKGCV-YTSLDELLKESDVISLHVPYTKETHHMIN--EERISLMKDGVYL  226 (334)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCH--HHHHTTCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBC--HHHHHHSCTTEEE
T ss_pred             HHHHHHHhhcccCceeeecCCccch--hhhhcCce-ecCHHHHHhhCCEEEEcCCCChhhccCcC--HHHHhhcCCCeEE
Confidence            5889999999999999999987653  23334544 45899999999999999999888888763  6677889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      |+++.+.-.+..++.+.++...+
T Consensus       227 IN~aRG~iVde~aL~~aL~~g~i  249 (334)
T 3kb6_A          227 INTARGKVVDTDALYRAYQRGKF  249 (334)
T ss_dssp             EECSCGGGBCHHHHHHHHHTTCE
T ss_pred             EecCccccccHHHHHHHHHhCCc
Confidence            99999999999999998876543

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=98.51  E-value=4.1e-08  Score=76.70  Aligned_cols=101  Identities=16%  Similarity=0.193  Sum_probs=73.5

Q ss_pred             CcHHHHHHHHh--CCCcEEEEcCCchhHHHHHHc-----CC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLK--NGHDVIVYDKNTDASQTLAKE-----GA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~--~g~~V~~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||+.++..|..  ...+|.+|||++++.+++.+.     |+  ..+++++++++++|+|++|+|... ...++   .  .
T Consensus       140 ~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~-~~pvl---~--~  213 (350)
T 1x7d_A          140 QSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA-YATII---T--P  213 (350)
T ss_dssp             THHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-EEEEE---C--G
T ss_pred             HHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-CCcee---c--H
Confidence            67888887753  345899999999999888764     43  446789999999999999999852 11222   1  2


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEee
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      +.+++|++|++.++..|. .+.+...+..++..|+|.
T Consensus       214 ~~l~~G~~V~~vgs~~p~-~~El~~~~~~~a~v~vD~  249 (350)
T 1x7d_A          214 DMLEPGMHLNAVGGDCPG-KTELHADVLRNARVFVEY  249 (350)
T ss_dssp             GGCCTTCEEEECSCCBTT-BEEECHHHHHTSEEEESS
T ss_pred             HHcCCCCEEEECCCCCCC-ceeeCHHHHhcCcEEECC
Confidence            578899999999998776 334444445556677774

>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*

Probab=98.51  E-value=2.7e-06  Score=63.56  Aligned_cols=110  Identities=15%  Similarity=0.166  Sum_probs=87.3

Q ss_pred             CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe---ec
Q psy755           33 GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD---AP  109 (183)
Q Consensus        33 g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~---~~  109 (183)
                      |+..+++-.|+++++|++|+=+|.+.....++   +.+.+++++|.+|.+.++.+|...-...+.+.++.+...+   +.
T Consensus       128 GVkVtsDD~EAvk~AEi~IlftPfG~~t~~Ia---kkii~~lpEgAII~nTCTipp~~ly~~le~l~R~DvgIsS~HPaa  204 (358)
T 2b0j_A          128 GLKVTSDDREAVEGADIVITWLPKGNKQPDII---KKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGC  204 (358)
T ss_dssp             TCEEESCHHHHHTTCSEEEECCTTCTTHHHHH---HHHGGGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECBCSS
T ss_pred             CcEeecchHHHhcCCCEEEEecCCCCCcHHHH---HHHHhhCcCCCEEecccCCCHHHHHHHHHHhCcccCCeeccCCCC
Confidence            67888899999999999999999998777887   9999999999999999999998877777766555444433   23


Q ss_pred             ccCCHHHHhcCceEEEec-CCHHHHHHHHHHHHHhcCCeEEe
Q psy755          110 VSGGTKAAQEATLTFMVG-GDKSSLEKAKPILKCMGRNIVHC  150 (183)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g~~~~~~  150 (183)
                      +.+.     .|...+-.+ .++++++++.+|.++.|+..+.+
T Consensus       205 VPgt-----~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~v  241 (358)
T 2b0j_A          205 VPEM-----KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKM  241 (358)
T ss_dssp             CTTT-----CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEE
T ss_pred             CCCC-----CCccccccccCCHHHHHHHHHHHHHhCCCeEec
Confidence            4443     455344333 58899999999999999987765

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.51  E-value=1.2e-07  Score=64.59  Aligned_cols=78  Identities=18%  Similarity=0.259  Sum_probs=61.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCc--ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GAN--MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~--~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||..++..|.+.|++|++|||++++.+.+.+. +..  ..++..+.+.++|+||.++|.+..   ++   .  ...+++|
T Consensus        32 iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~---~~---~--~~~l~~g  103 (144)
T 3oj0_A           32 LASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTP---IV---E--ERSLMPG  103 (144)
T ss_dssp             HHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSC---SB---C--GGGCCTT
T ss_pred             HHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCc---Ee---e--HHHcCCC
Confidence            57888888888999999999999998876554 543  456888889999999999998632   22   1  2567789


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .+++|.+..
T Consensus       104 ~~vid~~~p  112 (144)
T 3oj0_A          104 KLFIDLGNP  112 (144)
T ss_dssp             CEEEECCSS
T ss_pred             CEEEEccCC
Confidence            999998753

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.48  E-value=1.1e-07  Score=72.67  Aligned_cols=101  Identities=16%  Similarity=0.152  Sum_probs=72.2

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CC---ccc--CCHHHHhccCCEEEEecCChHHHH--HHhcCCcccc
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GA---NMA--LSLSTLASGAEFIISMLPASQDVL--DAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~---~~~--~~~~~~~~~adiVi~~vp~~~~~~--~v~~~~~~l~   71 (183)
                      ||++++..|.+.|+ +|++|+|++++++.+.+. +.   ...  +++.+.+.++|+||.++|.+....  .+.+  .  .
T Consensus       152 ~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~~~~~~~i--~--~  227 (297)
T 2egg_A          152 GARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPL--S--L  227 (297)
T ss_dssp             HHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSSCCSCCSS--C--C
T ss_pred             HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCCCCCCCCC--C--H
Confidence            58899999999998 999999999998887654 32   111  245566789999999999764210  0100  1  2


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..++++.+++|++.. |.... +.+..+++|..+++
T Consensus       228 ~~l~~~~~v~D~~y~-P~~T~-ll~~A~~~G~~~v~  261 (297)
T 2egg_A          228 ERLRPGVIVSDIIYN-PLETK-WLKEAKARGARVQN  261 (297)
T ss_dssp             TTCCTTCEEEECCCS-SSSCH-HHHHHHHTTCEEEC
T ss_pred             HHcCCCCEEEEcCCC-CCCCH-HHHHHHHCcCEEEC
Confidence            457789999999985 55443 66677788888776

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.42  E-value=7.7e-07  Score=62.94  Aligned_cols=99  Identities=14%  Similarity=0.138  Sum_probs=64.6

Q ss_pred             CcHHHHHHHHhC-CCcEEEEcCCchhHHHHHHcCCccc----CCH---HHH--hccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLKN-GHDVIVYDKNTDASQTLAKEGANMA----LSL---STL--ASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~~----~~~---~~~--~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      ||..+++.|.+. |++|+++|+++++.+.+.+.|....    .+.   .++  ++++|+||+++|+......++   .. 
T Consensus        50 ~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~---~~-  125 (183)
T 3c85_A           50 IGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQGNQTAL---EQ-  125 (183)
T ss_dssp             HHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHH---HH-
T ss_pred             HHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHH---HH-
Confidence            689999999999 9999999999999988887775421    122   233  568999999999876555553   32 


Q ss_pred             cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEee
Q psy755           71 LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      ...+.+...++..++ .+..    .+.+.+.|..++..
T Consensus       126 ~~~~~~~~~ii~~~~-~~~~----~~~l~~~G~~~vi~  158 (183)
T 3c85_A          126 LQRRNYKGQIAAIAE-YPDQ----LEGLLESGVDAAFN  158 (183)
T ss_dssp             HHHTTCCSEEEEEES-SHHH----HHHHHHHTCSEEEE
T ss_pred             HHHHCCCCEEEEEEC-CHHH----HHHHHHcCCCEEEc
Confidence            333444444443332 2222    23455567766654

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.41  E-value=1.7e-06  Score=58.01  Aligned_cols=99  Identities=17%  Similarity=0.263  Sum_probs=65.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcc-c---CCHHH---H-hccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANM-A---LSLST---L-ASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~-~---~~~~~---~-~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||..++..|.+.|++|+++|+++++.+.+.+. +... .   .+...   . +.++|+||+++|.......+    ....
T Consensus        15 iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~----~~~~   90 (140)
T 1lss_A           15 VGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNLMS----SLLA   90 (140)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHHHHH----HHHH
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHHHHH----HHHH
Confidence            58899999999999999999999988877654 5421 1   12222   1 56899999999986443333    3344


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      +.+..+++|+..++.  ..    .+.+.+.|+.++-+|
T Consensus        91 ~~~~~~~ii~~~~~~--~~----~~~l~~~g~~~v~~p  122 (140)
T 1lss_A           91 KSYGINKTIARISEI--EY----KDVFERLGVDVVVSP  122 (140)
T ss_dssp             HHTTCCCEEEECSST--TH----HHHHHHTTCSEEECH
T ss_pred             HHcCCCEEEEEecCH--hH----HHHHHHcCCCEEECH
Confidence            556667777654432  22    234556677666544

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=98.34  E-value=3.8e-07  Score=73.73  Aligned_cols=89  Identities=19%  Similarity=0.219  Sum_probs=70.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|++|++||+++.+...+...|... .+++++++.||+|++++..    +.++  ..+..+.+++|.+|
T Consensus       268 IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-~~l~ell~~aDiVi~~~~t----~~lI--~~~~l~~MK~gail  340 (479)
T 1v8b_A          268 VGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-VTLDEIVDKGDFFITCTGN----VDVI--KLEHLLKMKNNAVV  340 (479)
T ss_dssp             HHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECCSS----SSSB--CHHHHTTCCTTCEE
T ss_pred             HHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-cCHHHHHhcCCEEEECCCh----hhhc--CHHHHhhcCCCcEE
Confidence            689999999999999999999998765555556643 4899999999999999632    2333  13455678999999


Q ss_pred             EeccCCCc-hhHHHHHH
Q psy755           81 IDSSTVDP-QVPQTLSN   96 (183)
Q Consensus        81 id~s~~~~-~~~~~~~~   96 (183)
                      +|+++... .+..++.+
T Consensus       341 iNvgrg~~EId~~aL~~  357 (479)
T 1v8b_A          341 GNIGHFDDEIQVNELFN  357 (479)
T ss_dssp             EECSSTTTSBCHHHHHT
T ss_pred             EEeCCCCccccchhhhc
Confidence            99999988 57777776

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=98.34  E-value=2.6e-07  Score=69.83  Aligned_cols=101  Identities=13%  Similarity=0.055  Sum_probs=68.8

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcC-CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc-cccCCCC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKEG-ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI-LKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l-~~~l~~~   77 (183)
                      ||++++..|.+.|+ +|++++|++++.+.+.+.. ....+++.+.+.++|+||.++|.+.. ...-   .-+ ...++++
T Consensus       128 ~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~-~~~~---~~l~~~~l~~~  203 (277)
T 3don_A          128 ASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMN-GNTD---SVISLNRLASH  203 (277)
T ss_dssp             HHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC--------C---CSSCCTTCCSS
T ss_pred             HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCC-CCCc---CCCCHHHcCCC
Confidence            57899999999999 8999999999877655321 11233556667899999999987532 1110   001 2457789


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+++|++.....+  .+.+..+++|...++
T Consensus       204 ~~V~D~vY~P~~T--~ll~~A~~~G~~~~~  231 (277)
T 3don_A          204 TLVSDIVYNPYKT--PILIEAEQRGNPIYN  231 (277)
T ss_dssp             CEEEESCCSSSSC--HHHHHHHHTTCCEEC
T ss_pred             CEEEEecCCCCCC--HHHHHHHHCcCEEeC
Confidence            9999999774444  356677788887776

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=98.29  E-value=1.9e-07  Score=69.68  Aligned_cols=98  Identities=14%  Similarity=0.091  Sum_probs=68.6

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc-cccCCCC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI-LKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l-~~~l~~~   77 (183)
                      ||++++..|.+.|. +|++++|++++.+.+.+. +....+++.+.++++|+||.++|....-..     ..+ .+.++++
T Consensus       119 ~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~-----~~i~~~~l~~~  193 (253)
T 3u62_A          119 AARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEE-----LPVSDDSLKNL  193 (253)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCC-----CSCCHHHHTTC
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCC-----CCCCHHHhCcC
Confidence            68899999999998 899999999987776543 222345677888899999999986421100     111 2346789


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCc-EEe
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQIT-FLD  107 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~-~~~  107 (183)
                      ++|+|+... +..   +.+...++|++ .++
T Consensus       194 ~~V~Divy~-~T~---ll~~A~~~G~~~~~~  220 (253)
T 3u62_A          194 SLVYDVIYF-DTP---LVVKARKLGVKHIIK  220 (253)
T ss_dssp             SEEEECSSS-CCH---HHHHHHHHTCSEEEC
T ss_pred             CEEEEeeCC-CcH---HHHHHHHCCCcEEEC
Confidence            999999877 322   34444566776 655

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.29  E-value=1.3e-05  Score=54.13  Aligned_cols=98  Identities=13%  Similarity=0.200  Sum_probs=62.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-c-C-CHHHH-----hccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-A-L-SLSTL-----ASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-~-~-~~~~~-----~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||..+++.|.+.|++|+++|+++++++.+.+.|... . + +..+.     +.++|+||+++|++.....++   ..+. 
T Consensus        18 ~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~---~~a~-   93 (140)
T 3fwz_A           18 VGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIV---ASAR-   93 (140)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHHHH---HHHH-
T ss_pred             HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHHHH---HHHH-
Confidence            588999999999999999999999999988877532 1 1 12222     468999999999876554443   2222 


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+.++..++-..+ .+    ...+.+.+.|+..+-
T Consensus        94 ~~~~~~~iiar~~-~~----~~~~~l~~~G~d~vi  123 (140)
T 3fwz_A           94 AKNPDIEIIARAH-YD----DEVAYITERGANQVV  123 (140)
T ss_dssp             HHCSSSEEEEEES-SH----HHHHHHHHTTCSEEE
T ss_pred             HHCCCCeEEEEEC-CH----HHHHHHHHCCCCEEE
Confidence            3333333332221 12    223455566766544

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=98.26  E-value=5.4e-07  Score=69.62  Aligned_cols=97  Identities=13%  Similarity=0.164  Sum_probs=69.1

Q ss_pred             CcHHHHHHHHh--CCCcEEEEcCCchhHHHHHHc------CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLK--NGHDVIVYDKNTDASQTLAKE------GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~--~g~~V~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||+.++..|.+  ...+|.+|||++++.+++.+.      .+. ++++++++ ++|+|++|+|...   .++   .  .+
T Consensus       136 ~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~---pv~---~--~~  205 (322)
T 1omo_A          136 QAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK---PVV---K--AE  205 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS---CCB---C--GG
T ss_pred             HHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC---cee---c--HH
Confidence            46778888876  245899999999998887653      134 67888999 9999999999753   222   1  35


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEee
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      .+++|++|++.++..|.. ..+...+-.++..|++.
T Consensus       206 ~l~~G~~V~~ig~~~p~~-~el~~~~~~~a~v~vD~  240 (322)
T 1omo_A          206 WVEEGTHINAIGADGPGK-QELDVEILKKAKIVVDD  240 (322)
T ss_dssp             GCCTTCEEEECSCCSTTC-CCBCHHHHHTEEEEESC
T ss_pred             HcCCCeEEEECCCCCCCc-cccCHHHHhcCeEEECC
Confidence            688999999998887763 33333333444567773

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.24  E-value=7.3e-07  Score=70.04  Aligned_cols=84  Identities=14%  Similarity=0.192  Sum_probs=63.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccC-------------------------CHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMAL-------------------------SLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~-------------------------~~~~~~~~adiVi~~vp   55 (183)
                      ||..+++.+...|.+|++||+++++.+.+.+.|....+                         ++.+.++++|+||.++.
T Consensus       195 iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~  274 (381)
T 3p2y_A          195 AGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVITTAL  274 (381)
T ss_dssp             HHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCC
Confidence            57889999999999999999999999888877654322                         45678899999999863


Q ss_pred             ChH-HHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           56 ASQ-DVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        56 ~~~-~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      .+. ....++  .+++.+.+++|.+|+|++..
T Consensus       275 iPg~~ap~Lv--t~emv~~MkpGsVIVDvA~d  304 (381)
T 3p2y_A          275 VPGRPAPRLV--TAAAATGMQPGSVVVDLAGE  304 (381)
T ss_dssp             CTTSCCCCCB--CHHHHHTSCTTCEEEETTGG
T ss_pred             CCCcccceee--cHHHHhcCCCCcEEEEEeCC
Confidence            221 112222  25667788999999999853

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.24  E-value=1.8e-06  Score=56.15  Aligned_cols=90  Identities=19%  Similarity=0.172  Sum_probs=62.1

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHHcCCcc-------cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKEGANM-------ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||..++..|.+.| ++|++++|++++.+.+...+...       .+++.+.++++|+||.++|... ...++   +   .
T Consensus        16 iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~---~---~   88 (118)
T 3ic5_A           16 IGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-TPIIA---K---A   88 (118)
T ss_dssp             HHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-HHHHH---H---H
T ss_pred             HHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-hHHHH---H---H
Confidence            6899999999999 89999999999988877544321       1234456778999999997644 33333   2   2


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHH
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLA   98 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~   98 (183)
                      ....|..++|.++... ..+.+.+..
T Consensus        89 ~~~~g~~~~~~~~~~~-~~~~~~~~~  113 (118)
T 3ic5_A           89 AKAAGAHYFDLTEDVA-ATNAVRALV  113 (118)
T ss_dssp             HHHTTCEEECCCSCHH-HHHHHHHHH
T ss_pred             HHHhCCCEEEecCcHH-HHHHHHHHH
Confidence            3456778888876544 444554443

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=98.24  E-value=8.2e-07  Score=72.05  Aligned_cols=87  Identities=17%  Similarity=0.207  Sum_probs=68.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.+...|.+|++||+++.+.......|... .+++++++.+|+|++++..    +.++  .++..+.+++|.+|
T Consensus       288 IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~~l~ell~~aDiVi~~~~t----~~lI--~~~~l~~MK~gAil  360 (494)
T 3d64_A          288 VGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-VTMEYAADKADIFVTATGN----YHVI--NHDHMKAMRHNAIV  360 (494)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECSSS----SCSB--CHHHHHHCCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-CCHHHHHhcCCEEEECCCc----cccc--CHHHHhhCCCCcEE
Confidence            589999999999999999999998754444556554 4899999999999999833    2333  14456788999999


Q ss_pred             EeccCCCch-hHHHH
Q psy755           81 IDSSTVDPQ-VPQTL   94 (183)
Q Consensus        81 id~s~~~~~-~~~~~   94 (183)
                      +|+++.... +..++
T Consensus       361 INvgrg~veID~~aL  375 (494)
T 3d64_A          361 CNIGHFDSEIDVAST  375 (494)
T ss_dssp             EECSSSSCSBCCGGG
T ss_pred             EEcCCCcchhchHHH
Confidence            999998873 65566

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=98.23  E-value=4.5e-07  Score=68.18  Aligned_cols=101  Identities=20%  Similarity=0.175  Sum_probs=69.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||++++..|.+.|.+|++++|++++.+.+.+.+.... +.+++ .++|+||.++|.+......+ ..+.+.+.++++.++
T Consensus       129 aaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~~~~~l-~~~~l~~~l~~~~~v  205 (269)
T 3phh_A          129 SAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLHNELPL-NKEVLKGYFKEGKLA  205 (269)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCCCSCSS-CHHHHHHHHHHCSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCCCCCCC-ChHHHHhhCCCCCEE
Confidence            5789999999999999999999999988775454322 22332 38999999998753211111 101122246678999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +|+... |.+  .+.+..+++|+..++
T Consensus       206 ~D~vY~-P~T--~ll~~A~~~G~~~~~  229 (269)
T 3phh_A          206 YDLAYG-FLT--PFLSLAKELKTPFQD  229 (269)
T ss_dssp             EESCCS-SCC--HHHHHHHHTTCCEEC
T ss_pred             EEeCCC-Cch--HHHHHHHHCcCEEEC
Confidence            999976 433  266677788887776

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=98.23  E-value=3.5e-06  Score=67.17  Aligned_cols=89  Identities=18%  Similarity=0.193  Sum_probs=68.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|.+|++||+++.+...+...|... .+++++++.+|+|+++....    .++  ..+..+.+++|.+|
T Consensus       222 IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~-~sL~eal~~ADVVilt~gt~----~iI--~~e~l~~MK~gAIV  294 (436)
T 3h9u_A          222 VGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQV-LLVEDVVEEAHIFVTTTGND----DII--TSEHFPRMRDDAIV  294 (436)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCS----CSB--CTTTGGGCCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCee-cCHHHHHhhCCEEEECCCCc----Ccc--CHHHHhhcCCCcEE
Confidence            589999999999999999999998776666667654 48999999999999876432    233  14556788999999


Q ss_pred             EeccCCCc-hhHHHHHH
Q psy755           81 IDSSTVDP-QVPQTLSN   96 (183)
Q Consensus        81 id~s~~~~-~~~~~~~~   96 (183)
                      +|++...+ .+...+.+
T Consensus       295 INvgRg~vEID~~~L~~  311 (436)
T 3h9u_A          295 CNIGHFDTEIQVAWLKA  311 (436)
T ss_dssp             EECSSSGGGBCHHHHHH
T ss_pred             EEeCCCCCccCHHHHHh
Confidence            99998775 34444443

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.22  E-value=9.9e-07  Score=69.83  Aligned_cols=83  Identities=18%  Similarity=0.226  Sum_probs=62.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc-----------------------------CCHHHHhccCCEEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA-----------------------------LSLSTLASGAEFII   51 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~-----------------------------~~~~~~~~~adiVi   51 (183)
                      ||..+++.+...|.+|++||+++++.+.+.+.|....                             .++.+.++++|+||
T Consensus       201 iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI  280 (405)
T 4dio_A          201 AGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVI  280 (405)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHHHHHHHTCSEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHHHHHhcCCCEEE
Confidence            5888999999999999999999999888887765321                             14567789999999


Q ss_pred             EecCChH-HHHHHhcCCccccccCCCCcEEEeccC
Q psy755           52 SMLPASQ-DVLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        52 ~~vp~~~-~~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                      .++..+. ....++  .+++...+++|.+|+|++.
T Consensus       281 ~tvlipg~~ap~Lv--t~emv~~Mk~GsVIVDvA~  313 (405)
T 4dio_A          281 TTALIPGRPAPRLV--TREMLDSMKPGSVVVDLAV  313 (405)
T ss_dssp             ECCCCSSSCCCCCB--CHHHHTTSCTTCEEEETTG
T ss_pred             ECCcCCCCCCCEEe--cHHHHhcCCCCCEEEEEeC
Confidence            9863221 122222  2666778999999999985

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=98.22  E-value=3.6e-06  Score=64.81  Aligned_cols=81  Identities=20%  Similarity=0.223  Sum_probs=57.8

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHH----------cC--CcccCCHHHHhccCCEEEEecCC-----------
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAK----------EG--ANMALSLSTLASGAEFIISMLPA-----------   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~----------~g--~~~~~~~~~~~~~adiVi~~vp~-----------   56 (183)
                      ||.++|..|++.|+ +|++||+++++++....          ..  +..+++. +.+++||+||++++.           
T Consensus        15 ~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg~p~~~g~~r~d~   93 (317)
T 2ewd_A           15 IGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITASIPGRPKDDRSEL   93 (317)
T ss_dssp             HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCCCSSCCSSCGGGG
T ss_pred             HHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHH
Confidence            78999999999999 99999999987765310          01  2233566 678999999999932           


Q ss_pred             ---hHH-HHHHhcCCccccccCCCCcEEEeccCC
Q psy755           57 ---SQD-VLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        57 ---~~~-~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                         +.. .+.++   +.+.+.. ++.+++..|+.
T Consensus        94 ~~~~~~i~~~i~---~~i~~~~-~~~iii~~sNp  123 (317)
T 2ewd_A           94 LFGNARILDSVA---EGVKKYC-PNAFVICITNP  123 (317)
T ss_dssp             HHHHHHHHHHHH---HHHHHHC-TTSEEEECCSS
T ss_pred             HHhhHHHHHHHH---HHHHHHC-CCcEEEEeCCh
Confidence               222 34454   6676664 58888888773

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=98.19  E-value=3.6e-06  Score=64.57  Aligned_cols=80  Identities=18%  Similarity=0.208  Sum_probs=57.8

Q ss_pred             CcHHHHHHHHhCC--CcEEEEcCCchhHHHHHHc----------CCcc-cCCHHHHhccCCEEEEecCChHH--------
Q psy755            1 MGSHMARNLLKNG--HDVIVYDKNTDASQTLAKE----------GANM-ALSLSTLASGAEFIISMLPASQD--------   59 (183)
Q Consensus         1 mG~~iA~~l~~~g--~~V~~~~~~~~~~~~~~~~----------g~~~-~~~~~~~~~~adiVi~~vp~~~~--------   59 (183)
                      ||.++|..|++.|  ++|++||+++++++.+...          .... ..+. +.+++||+||+++|.++.        
T Consensus        12 ~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~~~~~~~~g~~   90 (309)
T 1hyh_A           12 VGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNIKLQQDNPTGD   90 (309)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCGGGTC------
T ss_pred             HHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCcccCCCCCCCC
Confidence            6899999999999  7999999999887665431          1232 3456 678899999999998663        


Q ss_pred             -----------HHHHhcCCccccccCCCCcEEEeccC
Q psy755           60 -----------VLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        60 -----------~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                                 ++.++   +.+.+.. ++.+|+..|+
T Consensus        91 r~~l~~~n~~i~~~i~---~~i~~~~-~~~~ii~~tN  123 (309)
T 1hyh_A           91 RFAELKFTSSMVQSVG---TNLKESG-FHGVLVVISN  123 (309)
T ss_dssp             -CTTHHHHHHHHHHHH---HHHHHTT-CCSEEEECSS
T ss_pred             HHHHHHHHHHHHHHHH---HHHHHHC-CCcEEEEEcC
Confidence                       34554   5565554 5666666655

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.14  E-value=2.3e-05  Score=52.76  Aligned_cols=97  Identities=18%  Similarity=0.225  Sum_probs=60.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc----cCCHHHH----hccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM----ALSLSTL----ASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~----~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      +|..+++.|.+.|++|+++|+++++++.+.+.+...    ..+...+    +.++|+||+++|+...-..+.   . ...
T Consensus        17 iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~---~-~a~   92 (141)
T 3llv_A           17 AGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFNLKIL---K-ALR   92 (141)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHH---H-HHH
T ss_pred             HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHHHHHH---H-HHH
Confidence            588999999999999999999999999888776431    1122221    357999999999754332232   2 223


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+....++.-..+  +..    .+.+.+.|+..+-
T Consensus        93 ~~~~~~iia~~~~--~~~----~~~l~~~G~~~vi  121 (141)
T 3llv_A           93 SVSDVYAIVRVSS--PKK----KEEFEEAGANLVV  121 (141)
T ss_dssp             HHCCCCEEEEESC--GGG----HHHHHHTTCSEEE
T ss_pred             HhCCceEEEEEcC--hhH----HHHHHHcCCCEEE
Confidence            3345555554333  222    2344556765444

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=98.13  E-value=1.2e-05  Score=61.46  Aligned_cols=100  Identities=14%  Similarity=0.126  Sum_probs=72.3

Q ss_pred             CcHH-HHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSH-MARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~-iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||.. ++..|.+. +++++ ++|+++++.+.+.+. |+..+++.++++++.|+|++++|...+.+.+.       ..+..
T Consensus        17 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~-------~al~~   89 (308)
T 3uuw_A           17 IAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEIIK-------ILLNL   89 (308)
T ss_dssp             HHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHHH-------HHHHT
T ss_pred             HHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHH-------HHHHC
Confidence            4554 66667763 66777 689999998887665 77668899999999999999999977655542       34567


Q ss_pred             CcEEE-e-ccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           77 GVIVI-D-SSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        77 ~~iii-d-~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |+.|+ + -.+..+.....+.+..++.|..+.-
T Consensus        90 gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v  122 (308)
T 3uuw_A           90 GVHVYVDKPLASTVSQGEELIELSTKKNLNLMV  122 (308)
T ss_dssp             TCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            77655 2 2344566777788887777766544

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=98.10  E-value=1.9e-05  Score=61.56  Aligned_cols=100  Identities=16%  Similarity=0.206  Sum_probs=73.8

Q ss_pred             CcHHHHHHHHhC--CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKN--GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||..++..|.+.  +++++ ++|+++++.+.+.+. |+..+++.+++++  +.|+|++|+|+..+.+.+.       ..+
T Consensus        24 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~al   96 (354)
T 3q2i_A           24 IANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPTQSI-------ECS   96 (354)
T ss_dssp             THHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGHHHHHH-------HHH
T ss_pred             HHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHHHHHHH-------HHH
Confidence            688889999887  67765 789999998887654 7777889999987  7999999999876655542       345


Q ss_pred             CCCcEEEec-c-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           75 KPGVIVIDS-S-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        75 ~~~~iiid~-s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..|+.|+-- - +........+.+..++.|..+.-
T Consensus        97 ~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v  131 (354)
T 3q2i_A           97 EAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFV  131 (354)
T ss_dssp             HTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             HCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence            677766532 2 34556667777777777766544

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=98.09  E-value=1.7e-05  Score=61.22  Aligned_cols=99  Identities=12%  Similarity=0.253  Sum_probs=73.6

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||..++..|.+. +++++ ++|+++++.+.+.+. ++. .++.+++++  +.|+|++++|+..+.+.+.       ..+.
T Consensus        14 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~-------~al~   85 (331)
T 4hkt_A           14 IGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADLIE-------RFAR   85 (331)
T ss_dssp             HHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHH-------HHHH
T ss_pred             HHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHH-------HHHH
Confidence            577888888875 67776 689999998887665 667 889999987  7999999999977665552       3455


Q ss_pred             CCcEEE-ecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIVI-DSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|+.|+ .-- +..+.....+.+..++.|..+.-
T Consensus        86 ~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v  119 (331)
T 4hkt_A           86 AGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMV  119 (331)
T ss_dssp             TTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             cCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence            676654 322 45667777888888888776554

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=98.06  E-value=2e-05  Score=61.39  Aligned_cols=100  Identities=17%  Similarity=0.291  Sum_probs=73.8

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHh--ccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLA--SGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~--~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||..++..|.+. +++++ ++|+++++.+.+.+. |+..+++.++++  .+.|+|++++|+..+.+.+.       ..+.
T Consensus        16 ~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~-------~al~   88 (354)
T 3db2_A           16 WAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVIE-------QCAR   88 (354)
T ss_dssp             HHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHHH-------HHHH
T ss_pred             HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHHH-------HHHH
Confidence            577888888877 67865 789999998887655 777788999998  56999999999977665552       3456


Q ss_pred             CCcEEE-ecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIVI-DSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|+.|+ .-- +........+.+..++.|..+.-
T Consensus        89 ~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v  122 (354)
T 3db2_A           89 SGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLC  122 (354)
T ss_dssp             TTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEE
T ss_pred             cCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence            776554 333 44566777888887777766544

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=98.06  E-value=3.3e-06  Score=64.90  Aligned_cols=95  Identities=18%  Similarity=0.267  Sum_probs=65.5

Q ss_pred             CcHHHHHHHHhC--CCcEEEEcCCchhHHHHHH-----cCC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKN--GHDVIVYDKNTDASQTLAK-----EGA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~~~~~~~~~~~~~~~-----~g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||..+++.|.+.  ..+|.+|||+  +.+++.+     .|+  ... +++++++++|+||.|+|...   .++   .  .
T Consensus       132 ~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~~---pvl---~--~  200 (313)
T 3hdj_A          132 QGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRSTT---PLF---A--G  200 (313)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCSS---CSS---C--G
T ss_pred             HHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCCC---ccc---C--H
Confidence            567788888753  3489999999  5444433     254  345 89999999999999999853   233   2  3


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcC-CcEEe
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQ-ITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g-~~~~~  107 (183)
                      +++++|++|++.++..|.. +.+...+-.+. ..|+|
T Consensus       201 ~~l~~G~~V~~vGs~~p~~-~El~~~~~~~a~~v~vD  236 (313)
T 3hdj_A          201 QALRAGAFVGAIGSSLPHT-RELDDEALRRARAVVVE  236 (313)
T ss_dssp             GGCCTTCEEEECCCSSTTC-CCCCHHHHHHCSEEEES
T ss_pred             HHcCCCcEEEECCCCCCch-hhcCHHHHhcCCEEEEC
Confidence            5788999999999988865 33333333333 45677

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.05  E-value=8.6e-06  Score=66.21  Aligned_cols=88  Identities=15%  Similarity=0.157  Sum_probs=68.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..+|+.+...|++|+++|+++.+.+.+...|... .++.++++.+|+||.+++....+.      .+..+.+++|.+|
T Consensus       285 IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-~~l~e~l~~aDvVi~atgt~~~i~------~~~l~~mk~ggil  357 (494)
T 3ce6_A          285 VGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-VTVEEAIGDADIVVTATGNKDIIM------LEHIKAMKDHAIL  357 (494)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECSSSSCSBC------HHHHHHSCTTCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-ecHHHHHhCCCEEEECCCCHHHHH------HHHHHhcCCCcEE
Confidence            588999999999999999999999988888778753 478888999999999997644221      2445678899999


Q ss_pred             EeccCCCc-hhHHHHH
Q psy755           81 IDSSTVDP-QVPQTLS   95 (183)
Q Consensus        81 id~s~~~~-~~~~~~~   95 (183)
                      ++.+.... .+...+.
T Consensus       358 vnvG~~~~eId~~aL~  373 (494)
T 3ce6_A          358 GNIGHFDNEIDMAGLE  373 (494)
T ss_dssp             EECSSSGGGBCHHHHH
T ss_pred             EEeCCCCCccCHHHHH
Confidence            99998764 3343433

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=98.04  E-value=3.4e-05  Score=59.44  Aligned_cols=101  Identities=12%  Similarity=0.180  Sum_probs=70.8

Q ss_pred             CcHHH-HHHHHhCCCcEE-EEcCCchhHHHHHHc-CCc-ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHM-ARNLLKNGHDVI-VYDKNTDASQTLAKE-GAN-MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~i-A~~l~~~g~~V~-~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||..+ +..|.+.+++++ ++|+++++.+.+.+. |+. ..++.+++++  +.|+|++++|+..+.+.+.       ..+
T Consensus        11 ~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~-------~al   83 (332)
T 2glx_A           11 IAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL-------AAI   83 (332)
T ss_dssp             HHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHH-------HHH
T ss_pred             HHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHH-------HHH
Confidence            46666 667777778866 689999988876654 664 5778999886  5999999999876554442       345


Q ss_pred             CCCcEEE-ec-cCCCchhHHHHHHHHHhcCCcEEee
Q psy755           75 KPGVIVI-DS-STVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        75 ~~~~iii-d~-s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      ..|+.|+ +. .+........+.+..++.|..+..+
T Consensus        84 ~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~  119 (332)
T 2glx_A           84 RAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTN  119 (332)
T ss_dssp             HTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred             HCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence            6787554 32 2345566677888777778766553

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.04  E-value=4.3e-06  Score=63.34  Aligned_cols=101  Identities=17%  Similarity=0.107  Sum_probs=67.9

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-C---CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-G---ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g---~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||++++..|++.|. +|++++|++++.+.+.+. +   .....+.+++..++|+||.++|.+...+...+  .  .+.++
T Consensus       137 ~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~~~~l--~--~~~l~  212 (281)
T 3o8q_A          137 AARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAI--D--PVIFS  212 (281)
T ss_dssp             HHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC----CSC--C--GGGEE
T ss_pred             HHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCCCCCC--C--HHHhC
Confidence            57899999999997 999999999998877654 1   11122444544789999999998754221111  1  23467


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCc-EEe
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQIT-FLD  107 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~-~~~  107 (183)
                      ++.+++|+......+.  +.+..+++|.. .++
T Consensus       213 ~~~~V~DlvY~P~~T~--ll~~A~~~G~~~~~~  243 (281)
T 3o8q_A          213 SRSVCYDMMYGKGYTV--FNQWARQHGCAQAID  243 (281)
T ss_dssp             EEEEEEESCCCSSCCH--HHHHHHHTTCSEEEC
T ss_pred             cCCEEEEecCCCccCH--HHHHHHHCCCCEEEC
Confidence            8899999987643332  34566777876 666

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=98.03  E-value=3.5e-05  Score=59.50  Aligned_cols=100  Identities=16%  Similarity=0.178  Sum_probs=73.3

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CC-cccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE-GA-NMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||..++..|.+. +++|+ ++|+++++.+.+.+. ++ ..+++.+++++  +.|+|++++|+..+.+.+.       ..+
T Consensus        16 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~al   88 (330)
T 3e9m_A           16 IVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSAAK-------LAL   88 (330)
T ss_dssp             THHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHHHH-------HHH
T ss_pred             HHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHH-------HHH
Confidence            688899999885 56776 689999998887665 66 46789999987  7999999999977655552       345


Q ss_pred             CCCcEE-Eecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           75 KPGVIV-IDSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        75 ~~~~ii-id~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..|+.| +.-- +........+.+..++.|..+..
T Consensus        89 ~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v  123 (330)
T 3e9m_A           89 SQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLME  123 (330)
T ss_dssp             HTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             HCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence            567644 4433 44566777788887777776554

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=98.03  E-value=7.2e-06  Score=63.21  Aligned_cols=80  Identities=24%  Similarity=0.295  Sum_probs=55.8

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc---------CCcc-cCCHHHHhccCCEEEEecCChHH---------
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE---------GANM-ALSLSTLASGAEFIISMLPASQD---------   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~---------g~~~-~~~~~~~~~~adiVi~~vp~~~~---------   59 (183)
                      ||.++|..|++.|+  +|++||+++++++.....         .... .++ .+.+++||+||+++|.+..         
T Consensus        11 ~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~~~g~~r~dl~   89 (319)
T 1a5z_A           11 VGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQKPGETRLQLL   89 (319)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCCCSSCCHHHHH
T ss_pred             HHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCCCCCCCHHHHH
Confidence            68999999999999  999999999887765421         1111 234 4567899999999987541         


Q ss_pred             ------HHHHhcCCccccccCCCCcEEEeccC
Q psy755           60 ------VLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        60 ------~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                            ++.++   +.+.+. .++.+++..|+
T Consensus        90 ~~n~~i~~~i~---~~i~~~-~~~~~ii~~tN  117 (319)
T 1a5z_A           90 GRNARVMKEIA---RNVSKY-APDSIVIVVTN  117 (319)
T ss_dssp             HHHHHHHHHHH---HHHHHH-CTTCEEEECSS
T ss_pred             HHHHHHHHHHH---HHHHhh-CCCeEEEEeCC
Confidence                  34444   556665 35666666655

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=98.01  E-value=2e-05  Score=61.15  Aligned_cols=100  Identities=17%  Similarity=0.202  Sum_probs=73.2

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||..++..|.+. +++++ ++|+++++.+.+.+. |...+++.+++++  +.|+|++++|+..+.+.+.       ..+.
T Consensus        15 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~-------~al~   87 (344)
T 3euw_A           15 IGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLIT-------RAVE   87 (344)
T ss_dssp             HHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHHH-------HHHH
T ss_pred             HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHHH-------HHHH
Confidence            578888888876 66766 689999998887665 7777889999988  8999999999977665552       3455


Q ss_pred             CCcEE-Eecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIV-IDSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~ii-id~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|+.| +.-- +..+.....+.+..++.|..+.-
T Consensus        88 ~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v  121 (344)
T 3euw_A           88 RGIPALCEKPIDLDIEMVRACKEKIGDGASKVML  121 (344)
T ss_dssp             TTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEE
T ss_pred             cCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEe
Confidence            66654 4333 44556677777777777765544

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=97.98  E-value=3.5e-05  Score=60.21  Aligned_cols=100  Identities=16%  Similarity=0.208  Sum_probs=72.5

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||...+..|.+. +++|+ ++|+++++.+.+.+.|+..+++.+++++  +.|+|++|+|...+.+.+       ...+..
T Consensus        16 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~-------~~al~a   88 (359)
T 3e18_A           16 MGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELA-------ISALEA   88 (359)
T ss_dssp             HHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHH-------HHHHHT
T ss_pred             HHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHH-------HHHHHC
Confidence            467777778776 66776 5799999887666668888889999987  789999999987765554       245667


Q ss_pred             CcEEE-ec-cCCCchhHHHHHHHHHhcCCcEEe
Q psy755           77 GVIVI-DS-STVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        77 ~~iii-d~-s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |+.|+ .- -+........+.+..++.|..+.-
T Consensus        89 GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v  121 (359)
T 3e18_A           89 GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMV  121 (359)
T ss_dssp             TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence            87655 32 134566677777777777765443

>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5

Probab=97.96  E-value=6.5e-05  Score=57.64  Aligned_cols=100  Identities=15%  Similarity=0.164  Sum_probs=70.3

Q ss_pred             CcHH-HHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSH-MARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~-iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||.. ++..|.+. +++++ ++|+++++.+.+.+. |+...++.+++..++|+|++++|+....+.+.       ..+..
T Consensus        16 ~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~-------~al~~   88 (319)
T 1tlt_A           16 IAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVS-------TLLNA   88 (319)
T ss_dssp             HHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHHHH-------HHHHT
T ss_pred             HHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHHHH-------HHHHc
Confidence            4554 67777653 67776 789999988877654 76667777777678999999999876655542       34567


Q ss_pred             CcE-EEec-cCCCchhHHHHHHHHHhcCCcEEe
Q psy755           77 GVI-VIDS-STVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        77 ~~i-iid~-s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |+. +++. .+..+.....+.+..++.|..+..
T Consensus        89 G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~  121 (319)
T 1tlt_A           89 GVHVCVDKPLAENLRDAERLVELAARKKLTLMV  121 (319)
T ss_dssp             TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence            775 4443 344566777888888877876554

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.96  E-value=3.9e-06  Score=66.14  Aligned_cols=83  Identities=23%  Similarity=0.312  Sum_probs=60.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-cCCcc------cCCHHHHhccCCEEEEecCChHH-HHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-EGANM------ALSLSTLASGAEFIISMLPASQD-VLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~------~~~~~~~~~~adiVi~~vp~~~~-~~~v~~~~~~l~~   72 (183)
                      ||..+++.+...|.+|++||+++++.+.+.+ .|...      ..++.+.+..+|+||.+++.+.. .+.++.  ++..+
T Consensus       179 iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t~~li~--~~~l~  256 (377)
T 2vhw_A          179 AGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKAPKLVS--NSLVA  256 (377)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCCCCCBC--HHHHT
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCCcceec--HHHHh
Confidence            5889999999999999999999998887766 34431      23456778899999998865432 112221  34456


Q ss_pred             cCCCCcEEEeccC
Q psy755           73 HAKPGVIVIDSST   85 (183)
Q Consensus        73 ~l~~~~iiid~s~   85 (183)
                      .+++|.+|+|++.
T Consensus       257 ~mk~g~~iV~va~  269 (377)
T 2vhw_A          257 HMKPGAVLVDIAI  269 (377)
T ss_dssp             TSCTTCEEEEGGG
T ss_pred             cCCCCcEEEEEec
Confidence            7889999999984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.95  E-value=2e-05  Score=54.16  Aligned_cols=63  Identities=21%  Similarity=0.231  Sum_probs=46.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH-HcCCccc----CCHH---HH-hccCCEEEEecCChHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA-KEGANMA----LSLS---TL-ASGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~~----~~~~---~~-~~~adiVi~~vp~~~~~~~v   63 (183)
                      ||..+++.|.+.|++|+++|+++++.+.+. ..|....    .+..   +. +.++|+||++++.+.....+
T Consensus        30 iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~~~~  101 (155)
T 2g1u_A           30 LGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDSTNFFI  101 (155)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHHHHHHH
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcHHHHHH
Confidence            588999999999999999999999887766 4453221    1222   22 56899999999986654444

>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}

Probab=97.94  E-value=1.6e-05  Score=61.01  Aligned_cols=99  Identities=15%  Similarity=0.207  Sum_probs=69.7

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||..++..|.+. +++++ ++|+++++.+.+.+. +...++.+++++  ++|+|++++|+..+.+.+       ...+..
T Consensus        21 ~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~-------~~al~~   92 (315)
T 3c1a_A           21 WGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHAEIT-------LAAIAS   92 (315)
T ss_dssp             TTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHHHHH-------HHHHHT
T ss_pred             HHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHHHHH-------HHHHHC
Confidence            678889999886 56654 789999887665544 555678888885  799999999987655444       234567


Q ss_pred             CcEE-Eec-cCCCchhHHHHHHHHHhcCCcEEe
Q psy755           77 GVIV-IDS-STVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        77 ~~ii-id~-s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |+.| ++- .+........+.+..++.|..+..
T Consensus        93 Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~  125 (315)
T 3c1a_A           93 GKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWV  125 (315)
T ss_dssp             TCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred             CCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence            7754 442 244566677777777777766554

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=97.94  E-value=1.2e-05  Score=60.58  Aligned_cols=100  Identities=14%  Similarity=0.186  Sum_probs=68.9

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHH---HHhcCCccc-cccC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVL---DAYDGSDGI-LKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~---~v~~~~~~l-~~~l   74 (183)
                      ||++++..|.+.|. +|++++|++++.+.+.+. +....++..  ..++|+||.++|.+....   ..    ..+ ...+
T Consensus       130 aarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~----~~~~~~~l  203 (271)
T 1npy_A          130 MAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD----LAFPKAFI  203 (271)
T ss_dssp             THHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS----CSSCHHHH
T ss_pred             HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC----CCCCHHHc
Confidence            68899999999997 899999999998887654 432222222  468999999999764211   00    001 1345


Q ss_pred             CCCcEEEeccCCCchhHHHHHHHHHhcCCcEEee
Q psy755           75 KPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        75 ~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      +++.+++|+... |... .+.+..+++|..+++.
T Consensus       204 ~~~~~v~DlvY~-P~~T-~ll~~A~~~G~~~i~G  235 (271)
T 1npy_A          204 DNASVAFDVVAM-PVET-PFIRYAQARGKQTISG  235 (271)
T ss_dssp             HHCSEEEECCCS-SSSC-HHHHHHHHTTCEEECH
T ss_pred             CCCCEEEEeecC-CCCC-HHHHHHHHCCCEEECC
Confidence            678899999864 4333 5666777888887774

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=97.94  E-value=4.8e-06  Score=56.52  Aligned_cols=94  Identities=19%  Similarity=0.269  Sum_probs=65.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh-HHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA-SQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||..+++.|.+.||+  +|++|+.+ .+.+  .|...+.++.|+-+..|++++++|. .....++   +++.+.- .+.+
T Consensus        28 ~G~~~~~~l~~~G~~--v~~vnp~~~~~~i--~G~~~~~sl~el~~~vDlavi~vp~-~~~~~v~---~~~~~~g-i~~i   98 (140)
T 1iuk_A           28 PAHYVPRYLREQGYR--VLPVNPRFQGEEL--FGEEAVASLLDLKEPVDILDVFRPP-SALMDHL---PEVLALR-PGLV   98 (140)
T ss_dssp             HHHHHHHHHHHTTCE--EEEECGGGTTSEE--TTEECBSSGGGCCSCCSEEEECSCH-HHHTTTH---HHHHHHC-CSCE
T ss_pred             hHHHHHHHHHHCCCE--EEEeCCCcccCcC--CCEEecCCHHHCCCCCCEEEEEeCH-HHHHHHH---HHHHHcC-CCEE
Confidence            478899999999997  66777764 1211  3667777888887889999999987 5556655   5555433 3355


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++..+..    .+++.+.+++.|++++.
T Consensus        99 ~~~~g~~----~~~~~~~a~~~Gir~vg  122 (140)
T 1iuk_A           99 WLQSGIR----HPEFEKALKEAGIPVVA  122 (140)
T ss_dssp             EECTTCC----CHHHHHHHHHTTCCEEE
T ss_pred             EEcCCcC----HHHHHHHHHHcCCEEEc
Confidence            5544332    36677778888999886

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=97.92  E-value=4.4e-05  Score=59.25  Aligned_cols=100  Identities=11%  Similarity=0.127  Sum_probs=72.5

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCc-ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE-GAN-MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||..++..|.+. +++++ ++|+++++.+.+.+. ++. .+++.+++++  ++|+|++|+|+..+.+.+.       ..+
T Consensus        13 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~al   85 (344)
T 3ezy_A           13 IGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVI-------ACA   85 (344)
T ss_dssp             HHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH-------HHH
T ss_pred             HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHHH-------HHH
Confidence            577788888775 56766 689999998877655 654 6789999987  7999999999877655542       345


Q ss_pred             CCCcEEE-ecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           75 KPGVIVI-DSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        75 ~~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..|+.|+ +-- +..+.....+.+..++.|..+.-
T Consensus        86 ~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v  120 (344)
T 3ezy_A           86 KAKKHVFCEKPLSLNLADVDRMIEETKKADVILFT  120 (344)
T ss_dssp             HTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred             hcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEE
Confidence            6776554 433 45666777888888777765544

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.91  E-value=1.3e-05  Score=62.78  Aligned_cols=106  Identities=22%  Similarity=0.243  Sum_probs=75.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC----C--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG----A--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g----~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      +|+.++..|.+ .++|.++|++.++++++.+..    +  ...+++.+.++++|+||.++|+... ..+.      ...+
T Consensus        27 vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~-~~v~------~~~~   98 (365)
T 3abi_A           27 IGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG-FKSI------KAAI   98 (365)
T ss_dssp             HHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGH-HHHH------HHHH
T ss_pred             HHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCccc-chHH------HHHH
Confidence            47888988876 489999999999988876542    1  1122455678899999999988643 2332      4567


Q ss_pred             CCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHH
Q psy755           75 KPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTK  115 (183)
Q Consensus        75 ~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~  115 (183)
                      ..|+.++|.|-..+ ....+.+.++++|..++. +.+..|..
T Consensus        99 ~~g~~yvD~s~~~~-~~~~l~~~a~~~g~~~i~~~G~~PG~~  139 (365)
T 3abi_A           99 KSKVDMVDVSFMPE-NPLELRDEAEKAQVTIVFDAGFAPGLS  139 (365)
T ss_dssp             HHTCEEEECCCCSS-CGGGGHHHHHHTTCEEECCCBTTTBHH
T ss_pred             hcCcceEeeeccch-hhhhhhhhhccCCceeeecCCCCCchH
Confidence            78999999885544 445677788888887666 56666654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.89  E-value=2.4e-05  Score=52.44  Aligned_cols=57  Identities=23%  Similarity=0.402  Sum_probs=42.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc----cCCHH---HH-hccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM----ALSLS---TL-ASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~---~~-~~~adiVi~~vp~~   57 (183)
                      ||..++..|.+.|++|+++|+++++.+.+.+.+...    ..+.+   ++ +.++|+||.+++.+
T Consensus        17 iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A           17 FGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   81 (144)
T ss_dssp             HHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence            588999999999999999999998877665544321    11222   22 56799999999875

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.88  E-value=1.2e-05  Score=63.22  Aligned_cols=85  Identities=19%  Similarity=0.293  Sum_probs=58.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-cCCcc------cCCHHHHhccCCEEEEecCChH-HHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-EGANM------ALSLSTLASGAEFIISMLPASQ-DVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-~g~~~------~~~~~~~~~~adiVi~~vp~~~-~~~~v~~~~~~l~~   72 (183)
                      ||..+++.+...|++|+++||++++.+.+.+ .+...      .+++.+.+..+|+||.+++.+. ....++  .+...+
T Consensus       177 iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~~li--~~~~l~  254 (369)
T 2eez_A          177 VGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAPKLV--TRDMLS  254 (369)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------CCS--CHHHHT
T ss_pred             HHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccchhH--HHHHHH
Confidence            5889999999999999999999998877765 34321      2345567789999999998653 122222  144556


Q ss_pred             cCCCCcEEEeccCCC
Q psy755           73 HAKPGVIVIDSSTVD   87 (183)
Q Consensus        73 ~l~~~~iiid~s~~~   87 (183)
                      .++++..|+|++...
T Consensus       255 ~mk~gg~iV~v~~~~  269 (369)
T 2eez_A          255 LMKEGAVIVDVAVDQ  269 (369)
T ss_dssp             TSCTTCEEEECC---
T ss_pred             hhcCCCEEEEEecCC
Confidence            778899999998643

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=97.87  E-value=5.7e-05  Score=58.08  Aligned_cols=100  Identities=13%  Similarity=0.126  Sum_probs=66.5

Q ss_pred             CcH-HHHHHHHhC-CCcEEEEcCCchhHHHHHHc-CCcc-cCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGS-HMARNLLKN-GHDVIVYDKNTDASQTLAKE-GANM-ALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~-~iA~~l~~~-g~~V~~~~~~~~~~~~~~~~-g~~~-~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||. .++..|.+. +++|+++|+++++.+.+.+. |+.. ..+..+.+ .++|+|++++|+....+.+.       ..+.
T Consensus        13 ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~-------~al~   85 (323)
T 1xea_A           13 IAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHSTLAA-------FFLH   85 (323)
T ss_dssp             HHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHHHHH-------HHHH
T ss_pred             HHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHHHHH-------HHHH
Confidence            455 477777764 67888999999998877654 6543 33444555 68999999999866554442       3455


Q ss_pred             CCcE-EEec-cCCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVI-VIDS-STVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~i-iid~-s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|+. +++- .+........+.+..++.|..+..
T Consensus        86 ~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v  119 (323)
T 1xea_A           86 LGIPTFVDKPLAASAQECENLYELAEKHHQPLYV  119 (323)
T ss_dssp             TTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEE
Confidence            6764 4443 234556667777777777766554

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.87  E-value=2.4e-05  Score=62.50  Aligned_cols=88  Identities=20%  Similarity=0.220  Sum_probs=66.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|+++|+++.+...+...|.... +++++++.+|+|+.+++..    .++  ..+..+.+++|.+|
T Consensus       258 IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv-~LeElL~~ADIVv~atgt~----~lI--~~e~l~~MK~GAIL  330 (464)
T 3n58_A          258 VGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVV-TLDDAASTADIVVTTTGNK----DVI--TIDHMRKMKDMCIV  330 (464)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-CHHHHGGGCSEEEECCSSS----SSB--CHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceec-cHHHHHhhCCEEEECCCCc----ccc--CHHHHhcCCCCeEE
Confidence            5889999999999999999999987665555676544 7899999999999987542    233  13455778999999


Q ss_pred             EeccCCCc-hhHHHHH
Q psy755           81 IDSSTVDP-QVPQTLS   95 (183)
Q Consensus        81 id~s~~~~-~~~~~~~   95 (183)
                      ++++.... .+..++.
T Consensus       331 INvGRgdvEID~~aL~  346 (464)
T 3n58_A          331 GNIGHFDNEIQVAALR  346 (464)
T ss_dssp             EECSSSTTTBTCGGGT
T ss_pred             EEcCCCCcccCHHHHH
Confidence            99998764 3443443

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.86  E-value=3.7e-05  Score=57.92  Aligned_cols=100  Identities=13%  Similarity=0.142  Sum_probs=67.1

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CC--cccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccc-cccC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GA--NMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGI-LKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~--~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l-~~~l   74 (183)
                      ||++++..|++.|. +|++++|++++.+.+.+. +.  ....+..++. .++|+||.++|.+..-..     .-+ .+.+
T Consensus       131 ~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~~~-----~~i~~~~l  205 (272)
T 3pwz_A          131 AVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTADL-----PPLPADVL  205 (272)
T ss_dssp             HHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGTCC-----CCCCGGGG
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCCCC-----CCCCHHHh
Confidence            47899999999996 999999999998887654 21  1111233332 689999999987643110     011 2357


Q ss_pred             CCCcEEEeccCCCchhHHHHHHHHHhcCCc-EEe
Q psy755           75 KPGVIVIDSSTVDPQVPQTLSNLAREKQIT-FLD  107 (183)
Q Consensus        75 ~~~~iiid~s~~~~~~~~~~~~~~~~~g~~-~~~  107 (183)
                      +++.+++|+......+.  +.+..+++|.. .++
T Consensus       206 ~~~~~V~DlvY~P~~T~--ll~~A~~~G~~~~~~  237 (272)
T 3pwz_A          206 GEAALAYELAYGKGLTP--FLRLAREQGQARLAD  237 (272)
T ss_dssp             TTCSEEEESSCSCCSCH--HHHHHHHHSCCEEEC
T ss_pred             CcCCEEEEeecCCCCCH--HHHHHHHCCCCEEEC
Confidence            78999999987643332  45566677876 555

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.85  E-value=2.6e-05  Score=62.03  Aligned_cols=82  Identities=15%  Similarity=0.211  Sum_probs=63.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+.+|+.|...|.+|+++|+++.+...+...|... .++++++..+|+|++|. ..   +.++  ..+....+++|.+|
T Consensus       231 IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~~Leeal~~ADIVi~at-gt---~~lI--~~e~l~~MK~gail  303 (435)
T 3gvp_A          231 VGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-VKLNEVIRQVDIVITCT-GN---KNVV--TREHLDRMKNSCIV  303 (435)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECS-SC---SCSB--CHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-ccHHHHHhcCCEEEECC-CC---cccC--CHHHHHhcCCCcEE
Confidence            588999999999999999999998766666667543 48999999999999973 31   2233  13455778999999


Q ss_pred             EeccCCCch
Q psy755           81 IDSSTVDPQ   89 (183)
Q Consensus        81 id~s~~~~~   89 (183)
                      ++++...+.
T Consensus       304 INvgrg~~E  312 (435)
T 3gvp_A          304 CNMGHSNTE  312 (435)
T ss_dssp             EECSSTTTT
T ss_pred             EEecCCCcc
Confidence            999987653

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=97.85  E-value=0.00012  Score=56.71  Aligned_cols=100  Identities=14%  Similarity=0.206  Sum_probs=70.0

Q ss_pred             CcHHHHHHHH-hC-CCcE-EEEcCCchhHHHHHHc-CC-cccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLL-KN-GHDV-IVYDKNTDASQTLAKE-GA-NMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~-~~-g~~V-~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||..++..|. +. ++++ .++|+++++.+.+.+. |. ...++.+++++  +.|+|++++|...+.+.+.       ..
T Consensus        19 ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~-------~a   91 (346)
T 3cea_A           19 LGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTI-------YA   91 (346)
T ss_dssp             THHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHHHHH-------HH
T ss_pred             HHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHHHHH-------HH
Confidence            6788888887 53 6675 4689999998877665 66 45778999886  6999999999876655542       34


Q ss_pred             CCCCcEEE-ec-cCCCchhHHHHHHHHHhc-CCcEEe
Q psy755           74 AKPGVIVI-DS-STVDPQVPQTLSNLAREK-QITFLD  107 (183)
Q Consensus        74 l~~~~iii-d~-s~~~~~~~~~~~~~~~~~-g~~~~~  107 (183)
                      +..|+.|+ +- .+........+.+..++. |..+..
T Consensus        92 l~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~  128 (346)
T 3cea_A           92 MNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQS  128 (346)
T ss_dssp             HHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEEC
T ss_pred             HHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEE
Confidence            56777654 32 233455566677777777 766554

>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}

Probab=97.84  E-value=0.00015  Score=56.03  Aligned_cols=97  Identities=13%  Similarity=0.180  Sum_probs=69.3

Q ss_pred             HHHHHHHhCCCcE-EEEcCCchhHHHHHHc--CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            4 HMARNLLKNGHDV-IVYDKNTDASQTLAKE--GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         4 ~iA~~l~~~g~~V-~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      .++..|...+++| .++|+++++.+.+.+.  +...+++.+++++  +.|+|++++|+..+.+.+.       ..+..|+
T Consensus        19 ~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~al~aGk   91 (336)
T 2p2s_A           19 DMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAELAL-------RTLDAGK   91 (336)
T ss_dssp             HHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHHH-------HHHHTTC
T ss_pred             HhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHHHHH-------HHHHCCC
Confidence            4566666678886 4789999998887765  4567789999886  6899999999877655553       4566787


Q ss_pred             EE-Eec-cCCCchhHHHHHHHHHhcCCcEEe
Q psy755           79 IV-IDS-STVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        79 ii-id~-s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .| ++- .+........+.+..++.|..+.-
T Consensus        92 hVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v  122 (336)
T 2p2s_A           92 DFFTAKPPLTTLEQLDAVQRRVAETGRKFAV  122 (336)
T ss_dssp             EEEECSSCCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred             cEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            54 443 234556677777777777765543

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.84  E-value=3.9e-05  Score=58.09  Aligned_cols=102  Identities=19%  Similarity=0.133  Sum_probs=68.8

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc------C--Cccc--CCHHHHhccCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE------G--ANMA--LSLSTLASGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~------g--~~~~--~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      +|++++..|++.|. +|++++|++++.+.+.+.      +  +...  +++.+.+.++|+||-++|.+..-..-.   .-
T Consensus       138 ~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm~~~~~~---pi  214 (283)
T 3jyo_A          138 VGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGT---AF  214 (283)
T ss_dssp             HHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTTSTTSCSC---SS
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCCCCCCCCC---CC
Confidence            47889999999998 699999999988776542      1  1122  367778889999999998643211000   00


Q ss_pred             ccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           70 ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      -...++++.+++|+.-....+.  +.+..+++|...++
T Consensus       215 ~~~~l~~~~~v~DlvY~P~~T~--ll~~A~~~G~~~~~  250 (283)
T 3jyo_A          215 DVSCLTKDHWVGDVVYMPIETE--LLKAARALGCETLD  250 (283)
T ss_dssp             CGGGCCTTCEEEECCCSSSSCH--HHHHHHHHTCCEEC
T ss_pred             CHHHhCCCCEEEEecCCCCCCH--HHHHHHHCcCeEeC
Confidence            1245778899999986544442  34455667877666

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=97.83  E-value=6.6e-05  Score=58.46  Aligned_cols=100  Identities=16%  Similarity=0.218  Sum_probs=72.4

Q ss_pred             CcH-HHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGS-HMARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~-~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||. .++..|.+. +++|+ ++|+++++.+.+.+. |+...++.+++++  +.|+|++|+|...+.+.+.       ..+
T Consensus        38 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~al  110 (350)
T 3rc1_A           38 IAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAEWID-------RAL  110 (350)
T ss_dssp             HHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHHHHH-------HHH
T ss_pred             HHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHHH-------HHH
Confidence            455 567777776 67776 689999988887665 7777789999986  5899999999977665552       345


Q ss_pred             CCCcEEE-ecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           75 KPGVIVI-DSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        75 ~~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..|+.|+ +-- +........+.+..++.|..+.-
T Consensus       111 ~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v  145 (350)
T 3rc1_A          111 RAGKHVLAEKPLTTDRPQAERLFAVARERGLLLME  145 (350)
T ss_dssp             HTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             HCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence            6776654 333 44566777888888887776554

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.83  E-value=7.8e-05  Score=56.01  Aligned_cols=100  Identities=18%  Similarity=0.177  Sum_probs=66.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CC---cccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCcccc-ccC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GA---NMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGIL-KHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~---~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~-~~l   74 (183)
                      ||++++..|++.|.+|++++|++++.+.+.+. +.   ....+..++. ..+|+||.++|.+.. ..+    ..+. ..+
T Consensus       130 ~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~-~~~----~~i~~~~l  204 (271)
T 1nyt_A          130 ASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS-GDI----PAIPSSLI  204 (271)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG-TCC----CCCCGGGC
T ss_pred             HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC-CCC----CCCCHHHc
Confidence            58899999999999999999999988777643 21   1112233333 589999999997653 111    1122 346


Q ss_pred             CCCcEEEeccCCCchhHHHHHHHHHhcCCc-EEe
Q psy755           75 KPGVIVIDSSTVDPQVPQTLSNLAREKQIT-FLD  107 (183)
Q Consensus        75 ~~~~iiid~s~~~~~~~~~~~~~~~~~g~~-~~~  107 (183)
                      +++.+++|++.....+ . +.+..+++|.. .++
T Consensus       205 ~~~~~v~D~~y~p~~t-~-~~~~a~~~G~~~~~~  236 (271)
T 1nyt_A          205 HPGIYCYDMFYQKGKT-P-FLAWCEQRGSKRNAD  236 (271)
T ss_dssp             CTTCEEEESCCCSSCC-H-HHHHHHHTTCCEEEC
T ss_pred             CCCCEEEEeccCCcCC-H-HHHHHHHcCCCeecC
Confidence            7889999998764333 2 44556677766 443

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.82  E-value=1.5e-05  Score=60.10  Aligned_cols=101  Identities=14%  Similarity=0.175  Sum_probs=65.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CC---cccCCHHHHhc-cCCEEEEecCChHHHHHHhcCCcccc-ccC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GA---NMALSLSTLAS-GAEFIISMLPASQDVLDAYDGSDGIL-KHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~---~~~~~~~~~~~-~adiVi~~vp~~~~~~~v~~~~~~l~-~~l   74 (183)
                      ||++++..|++.|.+|++++|++++.+.+.+. +.   ....+.+++.+ ++|+||.++|.+... .+    ..+. ..+
T Consensus       130 ~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~-~~----~~i~~~~l  204 (272)
T 1p77_A          130 ATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSG-GT----ASVDAEIL  204 (272)
T ss_dssp             HHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC------------CCCHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCC-CC----CCCCHHHc
Confidence            57889999999999999999999988777643 11   11123333323 899999999986532 22    1121 235


Q ss_pred             CCCcEEEeccCCCchhHHHHHHHHHhcCCc-EEe
Q psy755           75 KPGVIVIDSSTVDPQVPQTLSNLAREKQIT-FLD  107 (183)
Q Consensus        75 ~~~~iiid~s~~~~~~~~~~~~~~~~~g~~-~~~  107 (183)
                      +++.+++|++........ +.+..+++|.. +++
T Consensus       205 ~~~~~v~D~~y~p~~~t~-ll~~a~~~G~~~~v~  237 (272)
T 1p77_A          205 KLGSAFYDMQYAKGTDTP-FIALCKSLGLTNVSD  237 (272)
T ss_dssp             HHCSCEEESCCCTTSCCH-HHHHHHHTTCCCEEC
T ss_pred             CCCCEEEEeeCCCCcCCH-HHHHHHHcCCCEeeC
Confidence            678899999986544132 44566777876 666

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.81  E-value=4.8e-05  Score=58.83  Aligned_cols=80  Identities=19%  Similarity=0.133  Sum_probs=55.4

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHH-----------c-CCcccCCHHHHhccCCEEEEecCChH---------
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAK-----------E-GANMALSLSTLASGAEFIISMLPASQ---------   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~-----------~-g~~~~~~~~~~~~~adiVi~~vp~~~---------   58 (183)
                      ||.++|..|+..|+ +|++||+++++++....           . .+..+++. +.+++||+||++++.++         
T Consensus        25 vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~p~k~g~tr~dl  103 (328)
T 2hjr_A           25 IGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGVPRKPNMTRSDL  103 (328)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCCCTTCCSGGG
T ss_pred             HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCCCCCCCCchhhH
Confidence            68999999999999 99999999987764221           0 12333566 77899999999994332         


Q ss_pred             ------HHHHHhcCCccccccCCCCcEEEeccC
Q psy755           59 ------DVLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        59 ------~~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                            ..+.+.   +.+.+.- ++.+++..|+
T Consensus       104 ~~~n~~i~~~i~---~~i~~~~-p~a~viv~tN  132 (328)
T 2hjr_A          104 LTVNAKIVGSVA---ENVGKYC-PNAFVICITN  132 (328)
T ss_dssp             HHHHHHHHHHHH---HHHHHHC-TTCEEEECCS
T ss_pred             HhhhHHHHHHHH---HHHHHHC-CCeEEEEecC
Confidence                  133343   5565554 6677766665

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=97.79  E-value=5.3e-05  Score=51.54  Aligned_cols=93  Identities=16%  Similarity=0.205  Sum_probs=63.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||..+++.|.+.||+  +|++++.. +.+  .|...+.++.|+....|++++++|. .....++   +++.+.- .+.++
T Consensus        37 ~G~~~~~~l~~~G~~--v~~Vnp~~-~~i--~G~~~y~sl~~l~~~vDlvvi~vp~-~~~~~vv---~~~~~~g-i~~i~  106 (144)
T 2d59_A           37 DANIVMKYLLEHGYD--VYPVNPKY-EEV--LGRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYV---EQAIKKG-AKVVW  106 (144)
T ss_dssp             HHHHHHHHHHHTTCE--EEEECTTC-SEE--TTEECBSSGGGCSSCCSEEEECSCH-HHHHHHH---HHHHHHT-CSEEE
T ss_pred             hHHHHHHHHHHCCCE--EEEECCCC-CeE--CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH---HHHHHcC-CCEEE
Confidence            477899999999997  45555553 111  3667777888888889999999988 4556665   5555432 23444


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +..+ ..   ...+.+.+++.|++++.
T Consensus       107 ~~~g-~~---~~~l~~~a~~~Gi~vvG  129 (144)
T 2d59_A          107 FQYN-TY---NREASKKADEAGLIIVA  129 (144)
T ss_dssp             ECTT-CC---CHHHHHHHHHTTCEEEE
T ss_pred             ECCC-ch---HHHHHHHHHHcCCEEEc
Confidence            4322 22   45677788888999885

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.78  E-value=7.9e-05  Score=57.13  Aligned_cols=56  Identities=14%  Similarity=0.192  Sum_probs=42.4

Q ss_pred             CcHHHHHHHHhC--CCcEEEEcCCchhHHHHHH---c-------C--CcccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKN--GHDVIVYDKNTDASQTLAK---E-------G--ANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~~~~~~~~~~~~~~~---~-------g--~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      ||.++|..|++.  |++|++||+++++++....   .       .  +..+++.++ +++||+||+++|.+
T Consensus        11 vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~p   80 (310)
T 1guz_A           11 VGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGLP   80 (310)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCCC
Confidence            689999999985  7899999999987765431   1       1  223356666 89999999999764

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.78  E-value=4.7e-05  Score=58.22  Aligned_cols=82  Identities=20%  Similarity=0.280  Sum_probs=52.5

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc---C------CcccCCHHHHhccCCEEEEecCChHH----------
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE---G------ANMALSLSTLASGAEFIISMLPASQD----------   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~---g------~~~~~~~~~~~~~adiVi~~vp~~~~----------   59 (183)
                      ||.++|..|+..|+  +|++||+++++++.....   .      .....+..+.+++||+||++++.+..          
T Consensus        11 vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~~~~g~~r~dl~~   90 (304)
T 2v6b_A           11 VGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGANQKPGESRLDLLE   90 (304)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC------------CHH
T ss_pred             HHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCCCCCCCcHHHHHH
Confidence            68999999999999  999999999876542221   1      11111224568899999999965442          


Q ss_pred             -----HHHHhcCCccccccCCCCcEEEeccCC
Q psy755           60 -----VLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        60 -----~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                           ++.++   +.+.+. .++.+++..|+.
T Consensus        91 ~n~~i~~~i~---~~i~~~-~p~~~vi~~tNP  118 (304)
T 2v6b_A           91 KNADIFRELV---PQITRA-APDAVLLVTSNP  118 (304)
T ss_dssp             HHHHHHHHHH---HHHHHH-CSSSEEEECSSS
T ss_pred             hHHHHHHHHH---HHHHHh-CCCeEEEEecCc
Confidence                 23443   556665 567777766653

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.77  E-value=5e-05  Score=58.77  Aligned_cols=54  Identities=20%  Similarity=0.235  Sum_probs=42.9

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHH--------c--C--CcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAK--------E--G--ANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~--------~--g--~~~~~~~~~~~~~adiVi~~v   54 (183)
                      ||.++|..|+..|+ +|++||+++++++....        .  .  +..++++++.+++||+||+++
T Consensus        20 vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~   86 (331)
T 1pzg_A           20 IGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA   86 (331)
T ss_dssp             HHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred             HHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence            68999999999998 99999999987765221        1  1  223467887899999999999

>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*

Probab=97.76  E-value=0.00011  Score=58.61  Aligned_cols=76  Identities=17%  Similarity=0.248  Sum_probs=62.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCc------hhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNT------DASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      |.+=|.+|...|.+|++--|..      .+.+++.+.|.... +..|+++.+|+|++.+|+..+ ..++   +.+.|.|+
T Consensus        49 G~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~~ADvV~~L~PD~~q-~~vy---~~I~p~lk  123 (491)
T 3ulk_A           49 GLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVG-TYEELIPQADLVINLTPDKQH-SDVV---RTVQPLMK  123 (491)
T ss_dssp             HHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGGGCSEEEECSCGGGH-HHHH---HHHGGGSC
T ss_pred             hHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEec-CHHHHHHhCCEEEEeCChhhH-HHHH---HHHHhhCC
Confidence            6788999999999999887632      34567777887766 799999999999999999654 4555   77999999


Q ss_pred             CCcEEEe
Q psy755           76 PGVIVID   82 (183)
Q Consensus        76 ~~~iiid   82 (183)
                      +|+.+.=
T Consensus       124 ~G~~L~f  130 (491)
T 3ulk_A          124 DGAALGY  130 (491)
T ss_dssp             TTCEEEE
T ss_pred             CCCEEEe
Confidence            9999864

>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*

Probab=97.73  E-value=0.0001  Score=57.11  Aligned_cols=98  Identities=13%  Similarity=0.165  Sum_probs=71.0

Q ss_pred             CcHHHHHHHH-h-CCCcEE-EEcCCchhHHHHHHc-C--CcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLL-K-NGHDVI-VYDKNTDASQTLAKE-G--ANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~-~-~g~~V~-~~~~~~~~~~~~~~~-g--~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||..++..|. + .+++++ ++|+++++.+.+.+. |  ...+++.++++++  .|+|++++|...+.+.+.       .
T Consensus        13 ~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~   85 (344)
T 3mz0_A           13 IGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESSVL-------K   85 (344)
T ss_dssp             HHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH-------H
T ss_pred             HHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHHHHH-------H
Confidence            5778888888 4 366766 689999998887665 6  4667899999876  999999999877655552       4


Q ss_pred             cCCCCcEEE-ecc-CCCchhHHHHHHHHHhcCCcE
Q psy755           73 HAKPGVIVI-DSS-TVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        73 ~l~~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      .+..|+.|+ .-- +........+.+..++.|..+
T Consensus        86 al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~  120 (344)
T 3mz0_A           86 AIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRL  120 (344)
T ss_dssp             HHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred             HHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence            566777654 322 345566777777777777654

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.73  E-value=2e-05  Score=62.59  Aligned_cols=82  Identities=15%  Similarity=0.270  Sum_probs=59.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccC---------------------------CHHHHhccCCEEEEe
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMAL---------------------------SLSTLASGAEFIISM   53 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~---------------------------~~~~~~~~adiVi~~   53 (183)
                      ||..+++.+...|.+|+++|+++++.+.+...|.....                           ++.+.+..+|+||.+
T Consensus       183 iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e~~~~aDvVI~~  262 (401)
T 1x13_A          183 AGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTT  262 (401)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHHHHHHCSEEEEC
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHHHhCCCCEEEEC
Confidence            47888999999999999999999988887776754331                           255677889999999


Q ss_pred             --cCChHHHHHHhcCCccccccCCCCcEEEeccC
Q psy755           54 --LPASQDVLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        54 --vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                        +|... ...++  .++....+++|.+|+|++.
T Consensus       263 ~~~pg~~-ap~li--~~~~l~~mk~g~vIVdva~  293 (401)
T 1x13_A          263 ALIPGKP-APKLI--TREMVDSMKAGSVIVDLAA  293 (401)
T ss_dssp             CCCTTSC-CCCCB--CHHHHHTSCTTCEEEETTG
T ss_pred             CccCCCC-CCeee--CHHHHhcCCCCcEEEEEcC
Confidence              44211 11222  1334556889999999985

>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A

Probab=97.72  E-value=0.00032  Score=54.74  Aligned_cols=100  Identities=14%  Similarity=0.217  Sum_probs=71.0

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-C----CcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE-G----ANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g----~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||..++..|.+. +++++ ++|+++++.+.+.+. |    ....++.+++++  +.|+|++++|...+.+.+       .
T Consensus        17 ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~-------~   89 (362)
T 1ydw_A           17 IARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWA-------I   89 (362)
T ss_dssp             THHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHHHHH-------H
T ss_pred             HHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHHHHHH-------H
Confidence            678888888875 55654 689999988777654 5    345678999886  599999999987655444       2


Q ss_pred             ccCCCCcEEEecc--CCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPGVIVIDSS--TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s--~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+..|+.|+---  +........+.+..++.|..+..
T Consensus        90 ~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~  127 (362)
T 1ydw_A           90 KAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMD  127 (362)
T ss_dssp             HHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEE
T ss_pred             HHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence            4567888665322  34455667778887778877654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=97.65  E-value=4.7e-05  Score=59.63  Aligned_cols=100  Identities=14%  Similarity=0.191  Sum_probs=66.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||..+|+.|.+.|++|+++|+++++++++.+. +.... +..++. .+||+++.|...+     ++.  ....+.+ ..+
T Consensus       184 VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~~~-----~I~--~~~~~~l-g~~  254 (364)
T 1leh_A          184 VAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALGA-----VLN--DFTIPQL-KAK  254 (364)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCSC-----CBS--TTHHHHC-CCS
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccchHH-----HhC--HHHHHhC-CCc
Confidence            68899999999999999999999988876654 65444 444444 4899999886332     221  2223344 334


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeecc
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAPV  110 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~  110 (183)
                      +|++.+ ..|.+.....+.+.++|+.++..-+
T Consensus       255 iV~e~A-n~p~t~~ea~~~L~~~Gi~~~Pd~~  285 (364)
T 1leh_A          255 VIAGSA-DNQLKDPRHGKYLHELGIVYAPDYV  285 (364)
T ss_dssp             EECCSC-SCCBSSHHHHHHHHHHTCEECCHHH
T ss_pred             EEEeCC-CCCcccHHHHHHHHhCCCEEeccee
Confidence            555554 4455444566778888988777443

>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}

Probab=97.64  E-value=9.1e-05  Score=56.62  Aligned_cols=93  Identities=15%  Similarity=0.197  Sum_probs=57.9

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHcCCcc--cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKEGANM--ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||+.++..|.+. +++++ ++|+++++.+.   .|+..  .+++.+. .++|+|++|+|...+.+.+       ...+..
T Consensus        20 iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h~~~~-------~~al~a   88 (304)
T 3bio_A           20 IGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREVERTA-------LEILKK   88 (304)
T ss_dssp             HHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHHHHHH-------HHHHTT
T ss_pred             HHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhhHHHH-------HHHHHc
Confidence            577888888874 56877 68999987665   45442  3455444 6899999999986665444       345678


Q ss_pred             CcEEEeccCC---CchhHHHHHHHHHhcCCc
Q psy755           77 GVIVIDSSTV---DPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        77 ~~iiid~s~~---~~~~~~~~~~~~~~~g~~  104 (183)
                      |+.+++....   .+.....+.+..++.|..
T Consensus        89 G~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~  119 (304)
T 3bio_A           89 GICTADSFDIHDGILALRRSLGDAAGKSGAA  119 (304)
T ss_dssp             TCEEEECCCCGGGHHHHHHHHHHHHHHHTCE
T ss_pred             CCeEEECCCCCCCCHHHHHHHHHHHHhCCCE
Confidence            9999876432   334456666666666754

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.64  E-value=0.00011  Score=53.15  Aligned_cols=59  Identities=19%  Similarity=0.340  Sum_probs=44.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcc----cCC---HHHH-hccCCEEEEecCChHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANM----ALS---LSTL-ASGAEFIISMLPASQD   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~----~~~---~~~~-~~~adiVi~~vp~~~~   59 (183)
                      +|..+++.|.+.|++|+++|+++++++.+.+. +...    ..+   +.++ ++++|+||++++++..
T Consensus        11 ~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~   78 (218)
T 3l4b_C           11 TAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEV   78 (218)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHH
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHH
Confidence            58899999999999999999999999887653 4321    112   2232 5689999999988654

>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*

Probab=97.62  E-value=7.5e-05  Score=58.72  Aligned_cols=105  Identities=15%  Similarity=0.214  Sum_probs=68.8

Q ss_pred             CcHHHHHHHHhC--CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKN--GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||+.-+..+.+.  +++++ ++|+++++.+++.+. |+..+++.++++++.|+|++++|.......-.   +-....|..
T Consensus        17 ~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~~~~---~~a~~al~a   93 (372)
T 4gmf_A           17 FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVAGGAGT---QLARHFLAR   93 (372)
T ss_dssp             TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CTTSHHH---HHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCcccchhHH---HHHHHHHHc
Confidence            355555556554  46766 579999998887665 88888899999999999999999864311100   112345667


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCcEEee
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      |+.|+--=-........+.+..+++|..|.-.
T Consensus        94 GkhVl~EKPl~~~ea~~l~~~A~~~g~~~~v~  125 (372)
T 4gmf_A           94 GVHVIQEHPLHPDDISSLQTLAQEQGCCYWIN  125 (372)
T ss_dssp             TCEEEEESCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred             CCcEEEecCCCHHHHHHHHHHHHHcCCEEEEc
Confidence            77765333334566777777777888776653

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.61  E-value=0.00011  Score=56.37  Aligned_cols=82  Identities=15%  Similarity=0.256  Sum_probs=54.2

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHH--HH-HcCC------cc-cCCHHHHhccCCEEEEecCChH----------
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQT--LA-KEGA------NM-ALSLSTLASGAEFIISMLPASQ----------   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~--~~-~~g~------~~-~~~~~~~~~~adiVi~~vp~~~----------   58 (183)
                      ||..+|..|++.|+  +|+++|+++++++.  .. ..+.      .. ..+..+.++++|+||++++.++          
T Consensus        18 vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~~~~~~g~~r~~~~   97 (319)
T 1lld_A           18 VGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELV   97 (319)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCCCCCTTCCHHHHH
T ss_pred             HHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCCCCCCCCCCHHHHH
Confidence            68999999999999  99999999877652  21 2221      11 1112356789999999995442          


Q ss_pred             -----HHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           59 -----DVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        59 -----~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                           .++.++   +.+.+. .++.+|+..++.
T Consensus        98 ~~n~~~~~~~~---~~i~~~-~~~~~vi~~~Np  126 (319)
T 1lld_A           98 GATVNILKAIM---PNLVKV-APNAIYMLITNP  126 (319)
T ss_dssp             HHHHHHHHHHH---HHHHHH-CTTSEEEECCSS
T ss_pred             HHHHHHHHHHH---HHHHHh-CCCceEEEecCc
Confidence                 122444   555554 677788876653

>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}

Probab=97.60  E-value=0.00023  Score=55.49  Aligned_cols=98  Identities=17%  Similarity=0.164  Sum_probs=70.7

Q ss_pred             CcHHHHHHHH-h-CCCcEE-EEcCCchhHHHHHHc-C--CcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLL-K-NGHDVI-VYDKNTDASQTLAKE-G--ANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~-~-~g~~V~-~~~~~~~~~~~~~~~-g--~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||...+..|. + .+++++ ++|+++++.+.+.+. |  ...+++.+++++  +.|+|++|+|.....+.+.       .
T Consensus        34 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~-------~  106 (357)
T 3ec7_A           34 IGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHADVAV-------A  106 (357)
T ss_dssp             HHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH-------H
T ss_pred             HHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHH-------H
Confidence            5777888888 4 366766 689999998887665 6  566789999987  5899999999977665552       4


Q ss_pred             cCCCCcEEE-ecc-CCCchhHHHHHHHHHhcCCcE
Q psy755           73 HAKPGVIVI-DSS-TVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        73 ~l~~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      .+..|+.|+ .-- +........+.+..++.|..+
T Consensus       107 al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~  141 (357)
T 3ec7_A          107 ALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRM  141 (357)
T ss_dssp             HHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred             HHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence            456777654 322 345566777777777777654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.60  E-value=5.9e-05  Score=59.53  Aligned_cols=83  Identities=13%  Similarity=0.181  Sum_probs=58.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc--CC---------------------------HHHHhccCCEEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA--LS---------------------------LSTLASGAEFII   51 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~--~~---------------------------~~~~~~~adiVi   51 (183)
                      +|...++.+...|.+|+++|+++++.+.+.+.|....  +.                           +.+.+..+|+||
T Consensus       183 iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~aDvVi  262 (384)
T 1l7d_A          183 AGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAI  262 (384)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHHHHHTTCSEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHHHHhCCCCEEE
Confidence            4778888899999999999999998888777765432  11                           566778999999


Q ss_pred             EecCChH-HHHHHhcCCccccccCCCCcEEEeccC
Q psy755           52 SMLPASQ-DVLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        52 ~~vp~~~-~~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                      .+++.+- ..+.++  .++....+++|.+|+|++.
T Consensus       263 ~~~~~pg~~~~~li--~~~~l~~mk~g~vivdva~  295 (384)
T 1l7d_A          263 TTALIPGKPAPVLI--TEEMVTKMKPGSVIIDLAV  295 (384)
T ss_dssp             ECCCCTTSCCCCCS--CHHHHTTSCTTCEEEETTG
T ss_pred             ECCccCCCCCCeee--CHHHHhcCCCCCEEEEEec
Confidence            9993321 111121  1333456789999999984

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=97.60  E-value=0.00039  Score=53.60  Aligned_cols=100  Identities=16%  Similarity=0.187  Sum_probs=69.9

Q ss_pred             CcHHHHHHHHhCC---CcEE-EEcCCchhHHHHHHc-CC-cccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNG---HDVI-VYDKNTDASQTLAKE-GA-NMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g---~~V~-~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||...+..|.+.+   ++++ ++|+++++.+.+.+. |+ ..+++.+++++  +.|+|++++|...+.+.+.       .
T Consensus        13 ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~-------~   85 (334)
T 3ohs_X           13 ISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVM-------L   85 (334)
T ss_dssp             HHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHHHHH-------H
T ss_pred             HHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHH-------H
Confidence            4666777777654   3444 689999998887665 66 46789999987  6999999999977655552       4


Q ss_pred             cCCCCcEEE-ecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           73 HAKPGVIVI-DSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        73 ~l~~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+..|+.|+ .-- +........+.+..+++|..+..
T Consensus        86 al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v  122 (334)
T 3ohs_X           86 CLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLME  122 (334)
T ss_dssp             HHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             HHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence            566777654 322 34556677777777777766554

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=97.56  E-value=0.00036  Score=53.72  Aligned_cols=101  Identities=14%  Similarity=0.155  Sum_probs=69.9

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCc-ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE-GAN-MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      ||..++..|.+. +.+++ ++|+++++.+.+.+. ++. .+++.+++++  +.|+|++++|.....+.+       ...+
T Consensus        16 ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~-------~~al   88 (329)
T 3evn_A           16 VAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVA-------KAAL   88 (329)
T ss_dssp             THHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHH-------HHHH
T ss_pred             HHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHH-------HHHH
Confidence            677788888765 44655 679999988777665 654 6789999987  799999999987765554       2456


Q ss_pred             CCCcEEE-ecc-CCCchhHHHHHHHHHhcCCcEEee
Q psy755           75 KPGVIVI-DSS-TVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        75 ~~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      ..|+.|+ .-- +........+.+..++.|..+..+
T Consensus        89 ~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~  124 (329)
T 3evn_A           89 LAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEA  124 (329)
T ss_dssp             HTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred             HCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence            6777654 332 345566777778777777765543

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.55  E-value=0.00025  Score=54.64  Aligned_cols=54  Identities=19%  Similarity=0.284  Sum_probs=41.3

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc----------C--CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE----------G--ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~----------g--~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      ||.++|..|+..|+ +|++||+++++++.....          .  +..+++. +.+++||+||++++
T Consensus        15 vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g   81 (322)
T 1t2d_A           15 IGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG   81 (322)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred             HHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence            68899999999998 999999999876542211          1  2233566 77899999999983

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.54  E-value=0.0002  Score=57.89  Aligned_cols=99  Identities=20%  Similarity=0.278  Sum_probs=69.6

Q ss_pred             CcHHHHHHHHhC-CCcEEEEcCCchhHHHHHHc-CCcc----cC---CHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKN-GHDVIVYDKNTDASQTLAKE-GANM----AL---SLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~~~~~~~~~~~~~~~-g~~~----~~---~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      +|++++..|++. |++|++++|++++++.+.+. ++..    ..   ++.++++++|+||.++|..... .+.      .
T Consensus        34 iG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~~-~v~------~  106 (467)
T 2axq_A           34 VAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFHP-NVV------K  106 (467)
T ss_dssp             THHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGHH-HHH------H
T ss_pred             HHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhhH-HHH------H
Confidence            689999999988 78999999999998877654 3221    11   3445678999999999875432 222      2


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+..+..++|.+...|. ...+.+.+++.|+.+++
T Consensus       107 a~l~~g~~vvd~~~~~p~-~~~Ll~~Ak~aGv~~i~  141 (467)
T 2axq_A          107 SAIRTKTDVVTSSYISPA-LRELEPEIVKAGITVMN  141 (467)
T ss_dssp             HHHHHTCEEEECSCCCHH-HHHHHHHHHHHTCEEEC
T ss_pred             HHHhcCCEEEEeecCCHH-HHHHHHHHHHcCCEEEe
Confidence            345578888887654554 34666677777887776

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.52  E-value=0.00011  Score=55.63  Aligned_cols=100  Identities=15%  Similarity=0.060  Sum_probs=65.7

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHH-HHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVL-DAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~-~v~~~~~~l~~~l~~~   77 (183)
                      +|++++..|.+.|. +|++++|++++.+.+.+. +....+++.+ + ++|+||.++|.+..-. .-.   .--...++++
T Consensus       133 aaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~~---pi~~~~l~~~  207 (282)
T 3fbt_A          133 AARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGES---PVDKEVVAKF  207 (282)
T ss_dssp             THHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTCC---SSCHHHHTTC
T ss_pred             HHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCccC---CCCHHHcCCC
Confidence            57899999999998 899999999998777543 1111223333 4 8999999998753110 000   0012346788


Q ss_pred             cEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           78 VIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        78 ~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .+++|+.-....+  .+.+..+++|...++
T Consensus       208 ~~v~DlvY~P~~T--~ll~~A~~~G~~~~~  235 (282)
T 3fbt_A          208 SSAVDLIYNPVET--LFLKYARESGVKAVN  235 (282)
T ss_dssp             SEEEESCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred             CEEEEEeeCCCCC--HHHHHHHHCcCeEeC
Confidence            9999998654444  345556677877666

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.50  E-value=0.00016  Score=58.28  Aligned_cols=99  Identities=17%  Similarity=0.252  Sum_probs=66.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-C-Cc----ccC---CHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-G-AN----MAL---SLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g-~~----~~~---~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||+.++..|++.|++|++++|++++.+.+.+. + ..    ...   ++.++++++|+||.++|..... .+.      .
T Consensus        14 iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~-~i~------~   86 (450)
T 1ff9_A           14 VTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA-TVI------K   86 (450)
T ss_dssp             THHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHH-HHH------H
T ss_pred             HHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccch-HHH------H
Confidence            68999999999999999999999887766543 1 11    111   3446678999999999874332 221      1


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+..|+.++|.+...+.. ..+.+.+++.|+.++.
T Consensus        87 a~l~~g~~vvd~~~~~~~~-~~l~~aA~~aGv~~i~  121 (450)
T 1ff9_A           87 SAIRQKKHVVTTSYVSPAM-MELDQAAKDAGITVMN  121 (450)
T ss_dssp             HHHHHTCEEEESSCCCHHH-HHTHHHHHHTTCEEEC
T ss_pred             HHHhCCCeEEEeecccHHH-HHHHHHHHHCCCeEEe
Confidence            2345677888876544443 4666677777877666

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.50  E-value=0.00052  Score=52.66  Aligned_cols=102  Identities=10%  Similarity=0.102  Sum_probs=66.7

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCC---chhHHHHHHc-----CC----cccCC---HHHHhccCCEEEEecCChHHHH-HH
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKN---TDASQTLAKE-----GA----NMALS---LSTLASGAEFIISMLPASQDVL-DA   63 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~---~~~~~~~~~~-----g~----~~~~~---~~~~~~~adiVi~~vp~~~~~~-~v   63 (183)
                      +|++++..|++.|. +|++++|+   .++++.+.+.     +.    ...++   +.+.+.++|+||-++|.+..-. ..
T Consensus       165 ~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINaTp~Gm~~~~~~  244 (315)
T 3tnl_A          165 AATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGE  244 (315)
T ss_dssp             HHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSSTTSTTSTTC
T ss_pred             HHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEECccCCCCCCCCC
Confidence            47899999999998 89999999   7777665532     21    11222   3456779999999998653211 00


Q ss_pred             hcCCcc-ccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           64 YDGSDG-ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        64 ~~~~~~-l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .   .- ....++++.+|+|+.-....+  .+.+..+++|...++
T Consensus       245 ~---p~~~~~~l~~~~~V~DlvY~P~~T--~ll~~A~~~G~~~~~  284 (315)
T 3tnl_A          245 T---LLPSADMLRPELIVSDVVYKPTKT--RLLEIAEEQGCQTLN  284 (315)
T ss_dssp             C---SCCCGGGCCTTCEEEESCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred             C---CCCcHHHcCCCCEEEEeccCCCCC--HHHHHHHHCCCeEeC
Confidence            0   00 133577889999998655444  344555677876666

>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*

Probab=97.47  E-value=0.00035  Score=56.00  Aligned_cols=100  Identities=14%  Similarity=0.164  Sum_probs=68.7

Q ss_pred             CcH-HHHHHHHhC-CCcE-EEEcCCchhHHHHHHc-CCc-----ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGS-HMARNLLKN-GHDV-IVYDKNTDASQTLAKE-GAN-----MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~-~iA~~l~~~-g~~V-~~~~~~~~~~~~~~~~-g~~-----~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      ||. .++..|.+. ++++ .++|+++++.+.+.+. |+.     .+++.+++++  +.|+|++++|+..+.+.+.     
T Consensus        94 ~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~h~~~~~-----  168 (433)
T 1h6d_A           94 YALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAI-----  168 (433)
T ss_dssp             HHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHH-----
T ss_pred             HHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchhHHHHHH-----
Confidence            454 566777665 4565 4789999988877654 554     4678888886  7999999999877655552     


Q ss_pred             ccccCCCCcEEE-ec-cCCCchhHHHHHHHHHhcCCcEEe
Q psy755           70 ILKHAKPGVIVI-DS-STVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        70 l~~~l~~~~iii-d~-s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                        ..+..|+.|+ +. .+........+.+..++.|..+..
T Consensus       169 --~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v  206 (433)
T 1h6d_A          169 --RAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMI  206 (433)
T ss_dssp             --HHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             --HHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEE
Confidence              3466777554 32 234455667777777777776654

>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}

Probab=97.44  E-value=0.00071  Score=53.51  Aligned_cols=100  Identities=9%  Similarity=0.112  Sum_probs=70.0

Q ss_pred             CcHHHHHHHHhCC-CcEE--EEcCCchhHHHHHHc-CC---cccCCHHHHhcc-------CCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNG-HDVI--VYDKNTDASQTLAKE-GA---NMALSLSTLASG-------AEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~--~~~~~~~~~~~~~~~-g~---~~~~~~~~~~~~-------adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||...+..+...+ ++++  ++|+++++.+.+.+. |+   ..+++.++++++       .|+|++++|...+.+.+   
T Consensus        26 ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~---  102 (398)
T 3dty_A           26 IGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIATPNGTHYSIT---  102 (398)
T ss_dssp             SHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHH---
T ss_pred             hHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEECCCcHHHHHHH---
Confidence            4666677776654 5776  579999998887654 76   567899998865       89999999997765555   


Q ss_pred             CccccccCCCCcEEEecc--CCCchhHHHHHHHHHhcCCcEEe
Q psy755           67 SDGILKHAKPGVIVIDSS--TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s--~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                          ...+..|+.|+--=  +........+.+..++.|..+.-
T Consensus       103 ----~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v  141 (398)
T 3dty_A          103 ----KAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGV  141 (398)
T ss_dssp             ----HHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred             ----HHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence                24556787765311  33455667777777777765543

>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A

Probab=97.44  E-value=0.00034  Score=56.76  Aligned_cols=100  Identities=8%  Similarity=0.109  Sum_probs=69.4

Q ss_pred             CcHHHHHHHHhC--CCcEE-EEcCCchhHHHHHHc-CCc---ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKN--GHDVI-VYDKNTDASQTLAKE-GAN---MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~-~~~~~~~~~~~~~~~-g~~---~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||...+..|.+.  +++|+ ++|+++++.+.+.+. |+.   .+++.+++++  +.|+|++|+|...+.+.+.       
T Consensus        54 ~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp~~~H~~~~~-------  126 (479)
T 2nvw_A           54 VAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVK-------  126 (479)
T ss_dssp             HHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCHHHHHHHHH-------
T ss_pred             HHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCCcHHHHHHHH-------
Confidence            355567778775  66765 689999998887665 654   6789999885  6999999999876655543       


Q ss_pred             ccCCCC------c-EEEec-cCCCchhHHHHHHHHHhcC-CcEEe
Q psy755           72 KHAKPG------V-IVIDS-STVDPQVPQTLSNLAREKQ-ITFLD  107 (183)
Q Consensus        72 ~~l~~~------~-iiid~-s~~~~~~~~~~~~~~~~~g-~~~~~  107 (183)
                      ..+..|      + ++++- -+........+.+..++.| ..+.-
T Consensus       127 ~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v  171 (479)
T 2nvw_A          127 NILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTII  171 (479)
T ss_dssp             HHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEE
T ss_pred             HHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence            345566      5 45554 2345566677777777777 65443

>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}

Probab=97.44  E-value=0.00026  Score=55.23  Aligned_cols=96  Identities=13%  Similarity=0.145  Sum_probs=66.1

Q ss_pred             HHHHHHhC-CCcEE-EEcCCchhHHHHHHc--CCcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            5 MARNLLKN-GHDVI-VYDKNTDASQTLAKE--GANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         5 iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ++..|.+. +.+++ ++|+++++.+.+.+.  +...+++.++++++  .|+|++++|...+.+.+       ...+..|+
T Consensus        21 ~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~-------~~al~aGk   93 (359)
T 3m2t_A           21 LLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMG-------LLAMSKGV   93 (359)
T ss_dssp             HHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHHHHH-------HHHHHTTC
T ss_pred             HHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHHHHH-------HHHHHCCC
Confidence            66677765 56766 789999998887765  45667899999875  49999999987665444       34566777


Q ss_pred             EEE-ecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           79 IVI-DSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        79 iii-d~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|+ +-- +........+.+..++.|..+.-
T Consensus        94 hVl~EKPla~~~~e~~~l~~~a~~~g~~~~v  124 (359)
T 3m2t_A           94 NVFVEKPPCATLEELETLIDAARRSDVVSGV  124 (359)
T ss_dssp             EEEECSCSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             eEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence            655 222 33445667777777777765433

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.43  E-value=0.00021  Score=53.54  Aligned_cols=64  Identities=16%  Similarity=0.272  Sum_probs=49.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|..|.+.|.+|+++++.              +.++++.+++||+||.+++.+..    +   +  .+++++|.+|
T Consensus       162 VG~plA~lL~~~gAtVtv~~~~--------------t~~L~~~~~~ADIVI~Avg~p~~----I---~--~~~vk~GavV  218 (276)
T 3ngx_A          162 VGRPLSMMLLNRNYTVSVCHSK--------------TKDIGSMTRSSKIVVVAVGRPGF----L---N--REMVTPGSVV  218 (276)
T ss_dssp             THHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHHHSSEEEECSSCTTC----B---C--GGGCCTTCEE
T ss_pred             HHHHHHHHHHHCCCeEEEEeCC--------------cccHHHhhccCCEEEECCCCCcc----c---c--HhhccCCcEE
Confidence            4788888888888888888653              25788889999999999987542    2   1  2457899999


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      ||.+...
T Consensus       219 IDvgi~~  225 (276)
T 3ngx_A          219 IDVGINY  225 (276)
T ss_dssp             EECCCEE
T ss_pred             EEeccCc
Confidence            9998644

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.42  E-value=0.00018  Score=56.30  Aligned_cols=85  Identities=14%  Similarity=0.244  Sum_probs=59.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-------cCCHHHHhccCCEEEEecCChHH-HHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-------ALSLSTLASGAEFIISMLPASQD-VLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~adiVi~~vp~~~~-~~~v~~~~~~l~~   72 (183)
                      +|+.+++.+...|.+|+++||++++.+.+.+.+...       ..++.+.+..+|+||.+++.+.. ...++  .+...+
T Consensus       178 vG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~li--~~~~~~  255 (361)
T 1pjc_A          178 VGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILV--PASLVE  255 (361)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCB--CHHHHT
T ss_pred             HHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCeec--CHHHHh
Confidence            478889999999999999999999988876653221       12344566789999999976431 00111  023345


Q ss_pred             cCCCCcEEEeccCCC
Q psy755           73 HAKPGVIVIDSSTVD   87 (183)
Q Consensus        73 ~l~~~~iiid~s~~~   87 (183)
                      .++++..|+|.+...
T Consensus       256 ~~~~g~~ivdv~~~~  270 (361)
T 1pjc_A          256 QMRTGSVIVDVAVDQ  270 (361)
T ss_dssp             TSCTTCEEEETTCTT
T ss_pred             hCCCCCEEEEEecCC
Confidence            678899999998643

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.42  E-value=0.00026  Score=57.30  Aligned_cols=80  Identities=23%  Similarity=0.294  Sum_probs=62.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|.+|+++|+++.+...+...+.. ..+.++++..+|+|+.+......+.      ....+.++++.+|
T Consensus       276 IG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~d-v~~lee~~~~aDvVi~atG~~~vl~------~e~l~~mk~gaiV  348 (488)
T 3ond_A          276 VGKGCAAALKQAGARVIVTEIDPICALQATMEGLQ-VLTLEDVVSEADIFVTTTGNKDIIM------LDHMKKMKNNAIV  348 (488)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-ECCGGGTTTTCSEEEECSSCSCSBC------HHHHTTSCTTEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCc-cCCHHHHHHhcCEEEeCCCChhhhh------HHHHHhcCCCeEE
Confidence            58999999999999999999999888777777754 3477888899999998875432221      2234567889999


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      ++.+...
T Consensus       349 vNaG~~~  355 (488)
T 3ond_A          349 CNIGHFD  355 (488)
T ss_dssp             EESSSTT
T ss_pred             EEcCCCC
Confidence            9988753

>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A

Probab=97.39  E-value=0.00043  Score=55.49  Aligned_cols=100  Identities=9%  Similarity=0.083  Sum_probs=70.2

Q ss_pred             CcHHHHHHHHhC--CCcEE-EEcCCchhHHHHHHc-CCc---ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKN--GHDVI-VYDKNTDASQTLAKE-GAN---MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~-~~~~~~~~~~~~~~~-g~~---~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||...+..|.+.  +++|+ ++|+++++.+.+.+. |+.   .+++.+++++  +.|+|++++|...+.+.+.       
T Consensus        35 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~-------  107 (438)
T 3btv_A           35 AIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQVASHYEVVM-------  107 (438)
T ss_dssp             TTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSCHHHHHHHHH-------
T ss_pred             HHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCCcHHHHHHHH-------
Confidence            466788888876  66764 689999988877665 554   6779999886  6899999999876655553       


Q ss_pred             ccCCCC------cE-EEec-cCCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPG------VI-VIDS-STVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~------~i-iid~-s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+..|      +. ++.- .+........+.+..++.|..+.-
T Consensus       108 ~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v  151 (438)
T 3btv_A          108 PLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTII  151 (438)
T ss_dssp             HHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEE
T ss_pred             HHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEE
Confidence            344455      54 4553 244566677777777777765444

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=97.39  E-value=0.00091  Score=53.25  Aligned_cols=99  Identities=17%  Similarity=0.208  Sum_probs=68.5

Q ss_pred             cHHHHHHHHhCC-CcEE--EEcCCchhHHHHHHc-CC---cccCCHHHHhcc-------CCEEEEecCChHHHHHHhcCC
Q psy755            2 GSHMARNLLKNG-HDVI--VYDKNTDASQTLAKE-GA---NMALSLSTLASG-------AEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         2 G~~iA~~l~~~g-~~V~--~~~~~~~~~~~~~~~-g~---~~~~~~~~~~~~-------adiVi~~vp~~~~~~~v~~~~   67 (183)
                      |...+..+...+ ++++  ++|+++++.+.+.+. |+   ..+++.++++++       .|+|++++|...+.+.+    
T Consensus        52 g~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~tp~~~H~~~~----  127 (417)
T 3v5n_A           52 GAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIVTPNHVHYAAA----  127 (417)
T ss_dssp             HHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEECSCTTSHHHHH----
T ss_pred             HHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEECCCcHHHHHHH----
Confidence            445555566555 5765  579999998887664 76   467899998876       99999999997765544    


Q ss_pred             ccccccCCCCcEEE-ecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           68 DGILKHAKPGVIVI-DSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        68 ~~l~~~l~~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                         ...+..|+.|+ +-- +........+.+..++.|..+.-
T Consensus       128 ---~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v  166 (417)
T 3v5n_A          128 ---KEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVL  166 (417)
T ss_dssp             ---HHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEE
T ss_pred             ---HHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence               34567787765 322 33555667777777777765443

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.35  E-value=0.00059  Score=52.28  Aligned_cols=101  Identities=10%  Similarity=0.195  Sum_probs=66.7

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCC---chhHHHHHHc-----CC--c--ccCCH---HHHhccCCEEEEecCChHHHHHHh
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKN---TDASQTLAKE-----GA--N--MALSL---STLASGAEFIISMLPASQDVLDAY   64 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~---~~~~~~~~~~-----g~--~--~~~~~---~~~~~~adiVi~~vp~~~~~~~v~   64 (183)
                      +|++++..|++.|. +|++++|+   .++++.+.+.     +.  .  ...+.   .+.+.++|+||-++|.+..-..- 
T Consensus       159 aaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINaTp~Gm~~~~~-  237 (312)
T 3t4e_A          159 AATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNGTKVGMKPLEN-  237 (312)
T ss_dssp             HHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEECSSTTSTTSTT-
T ss_pred             HHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEECCcCCCCCCCC-
Confidence            47889999999998 89999999   7766665542     21  1  12343   45677899999999976311000 


Q ss_pred             cCCccc---cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           65 DGSDGI---LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        65 ~~~~~l---~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                         ..+   ...++++.++.|+.-....+  .+.+..+++|...++
T Consensus       238 ---~~~~~~~~~l~~~~~v~D~vY~P~~T--~ll~~A~~~G~~~~~  278 (312)
T 3t4e_A          238 ---ESLIGDVSLLRPELLVTECVYNPHMT--KLLQQAQQAGCKTID  278 (312)
T ss_dssp             ---CCSCCCGGGSCTTCEEEECCCSSSSC--HHHHHHHHTTCEEEC
T ss_pred             ---CcccCCHHHcCCCCEEEEeccCCCCC--HHHHHHHHCCCeEEC
Confidence               111   13577889999998655444  345555677877666

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.34  E-value=0.00078  Score=53.66  Aligned_cols=98  Identities=22%  Similarity=0.292  Sum_probs=63.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cC--CH---HHH-hccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--AL--SL---STL-ASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~--~~---~~~-~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      +|..+++.|.+.|++|++.|+++++++.+.+.|...  .+  +.   .++ +.++|+||++++++.....++   . ...
T Consensus        15 ~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~~i~---~-~ar   90 (413)
T 3l9w_A           15 FGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLT---E-MVK   90 (413)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHHHHH---H-HHH
T ss_pred             HHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHHHHH---H-HHH
Confidence            488999999999999999999999999998876532  11  22   222 568999999999866544443   2 333


Q ss_pred             cCCCC-cEEEeccCCCchhHHHHHHHHHhcCCcEEee
Q psy755           73 HAKPG-VIVIDSSTVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        73 ~l~~~-~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      .+.+. .+|+-..+  +    .-...+.+.|+..+-.
T Consensus        91 ~~~p~~~Iiara~~--~----~~~~~L~~~Gad~Vi~  121 (413)
T 3l9w_A           91 EHFPHLQIIARARD--V----DHYIRLRQAGVEKPER  121 (413)
T ss_dssp             HHCTTCEEEEEESS--H----HHHHHHHHTTCSSCEE
T ss_pred             HhCCCCeEEEEECC--H----HHHHHHHHCCCCEEEC
Confidence            34454 45443322  1    2233455667665443

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.34  E-value=0.00011  Score=55.76  Aligned_cols=101  Identities=19%  Similarity=0.260  Sum_probs=64.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CC---------cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GA---------NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~---------~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      ||++++..|++.| +|++++|++++.+.+.+. +.         ....+..+...++|+||.++|.+... ..-  ...+
T Consensus       139 iG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~~~~-~~~--~~~~  214 (287)
T 1nvt_A          139 AARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYP-NID--VEPI  214 (287)
T ss_dssp             HHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTTCTT-CCS--SCCS
T ss_pred             HHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCCCCC-CCC--CCCC
Confidence            5899999999999 999999999887766432 10         01112244567899999999875421 000  0001


Q ss_pred             --cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           71 --LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        71 --~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                        .+.++++.+++|++.. |... .+.+..+++|..+++
T Consensus       215 ~~~~~l~~~~~v~Dv~y~-p~~t-~ll~~a~~~G~~~~~  251 (287)
T 1nvt_A          215 VKAEKLREDMVVMDLIYN-PLET-VLLKEAKKVNAKTIN  251 (287)
T ss_dssp             SCSTTCCSSSEEEECCCS-SSSC-HHHHHHHTTTCEEEC
T ss_pred             CCHHHcCCCCEEEEeeeC-CccC-HHHHHHHHCCCEEeC
Confidence              2457788999999874 4332 244555666766554

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.34  E-value=0.00039  Score=52.75  Aligned_cols=63  Identities=21%  Similarity=0.277  Sum_probs=47.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHH--HHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLS--TLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|+.+|..|.+.|.+|+++++...              +++  +.+++||+||.+++.+..    +   +  .+++++|.
T Consensus       177 VG~p~A~lL~~~gAtVtv~~~~T~--------------~l~l~~~~~~ADIVI~Avg~p~~----I---~--~~~vk~Ga  233 (300)
T 4a26_A          177 VGAPVAALLMKENATVTIVHSGTS--------------TEDMIDYLRTADIVIAAMGQPGY----V---K--GEWIKEGA  233 (300)
T ss_dssp             THHHHHHHHHHTTCEEEEECTTSC--------------HHHHHHHHHTCSEEEECSCCTTC----B---C--GGGSCTTC
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCCC--------------CchhhhhhccCCEEEECCCCCCC----C---c--HHhcCCCc
Confidence            478888888888888888876332              344  788999999999997542    2   1  24578999


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      +|||++..
T Consensus       234 vVIDvgi~  241 (300)
T 4a26_A          234 AVVDVGTT  241 (300)
T ss_dssp             EEEECCCE
T ss_pred             EEEEEecc
Confidence            99999864

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.32  E-value=0.0011  Score=45.07  Aligned_cols=81  Identities=16%  Similarity=0.134  Sum_probs=50.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc-hhHHHHHH---cCCcc----c---CCHHHH-hccCCEEEEecCChHHHHHHhcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT-DASQTLAK---EGANM----A---LSLSTL-ASGAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~-~~~~~~~~---~g~~~----~---~~~~~~-~~~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      +|..+++.|.+.|++|++.|+++ ++.+.+..   .|...    .   +.+.++ ++++|+|++++++...-..+    .
T Consensus        14 vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~----~   89 (153)
T 1id1_A           14 LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFV----V   89 (153)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHHHHHHH----H
T ss_pred             HHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCChHHHHHH----H
Confidence            47889999999999999999984 55544432   23221    1   122333 67899999999886533333    2


Q ss_pred             cccccC-CCCcEEEeccC
Q psy755           69 GILKHA-KPGVIVIDSST   85 (183)
Q Consensus        69 ~l~~~l-~~~~iiid~s~   85 (183)
                      .....+ +...+++...+
T Consensus        90 ~~a~~~~~~~~ii~~~~~  107 (153)
T 1id1_A           90 LSAKDMSSDVKTVLAVSD  107 (153)
T ss_dssp             HHHHHHTSSSCEEEECSS
T ss_pred             HHHHHHCCCCEEEEEECC
Confidence            233334 44566664443

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=97.31  E-value=0.0011  Score=51.84  Aligned_cols=97  Identities=19%  Similarity=0.175  Sum_probs=66.0

Q ss_pred             cHH-HHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            2 GSH-MARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         2 G~~-iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      |.. .+..+.+. +++|+ ++|+++++++  ... +...+++.+++++  +.|+|++|+|...+.+.+       ...+.
T Consensus        19 g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~-------~~al~   89 (364)
T 3e82_A           19 GKTFHAPLIRSVPGLNLAFVASRDEEKVK--RDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLA-------RLALN   89 (364)
T ss_dssp             HHHTHHHHHHTSTTEEEEEEECSCHHHHH--HHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHH-------HHHHH
T ss_pred             HHHHHHHHHhhCCCeEEEEEEcCCHHHHH--hhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHH-------HHHHH
Confidence            443 44455554 66775 6799998755  223 5566789999987  789999999987765555       34566


Q ss_pred             CCcEEEecc--CCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIVIDSS--TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~iiid~s--~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|+.|+---  +........+.+..++.|..+.-
T Consensus        90 aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v  123 (364)
T 3e82_A           90 AGKHVVVDKPFTLDMQEARELIALAEEKQRLLSV  123 (364)
T ss_dssp             TTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence            788776443  34556667777777777765543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.30  E-value=0.0011  Score=50.67  Aligned_cols=56  Identities=18%  Similarity=0.171  Sum_probs=41.3

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc----------C--CcccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE----------G--ANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~----------g--~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      ||.+++..|+..|+ +|+++|+++++++.....          .  +..+++. +.+++||+||++++.+
T Consensus        13 vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p   81 (309)
T 1ur5_A           13 VGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP   81 (309)
T ss_dssp             HHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred             HHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence            68899999999997 999999999876542211          1  1223565 6789999999998554

>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}

Probab=97.29  E-value=0.00098  Score=52.50  Aligned_cols=99  Identities=13%  Similarity=0.232  Sum_probs=69.1

Q ss_pred             cHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |..++..|.+. +++++ ++|+++++.+.+.+. |+..+++.++++++  .|+|++++|+..+.+.+       ...+..
T Consensus        15 ~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~-------~~al~a   87 (387)
T 3moi_A           15 SVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHV-------VQASEQ   87 (387)
T ss_dssp             HTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHHH-------HHHHHT
T ss_pred             HHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHH-------HHHHHC
Confidence            44566667665 45665 689999988776654 88888899999874  99999999987665544       245667


Q ss_pred             CcEEEe-cc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           77 GVIVID-SS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        77 ~~iiid-~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |+.|+- -- +........+.+..++.|..+.-
T Consensus        88 Gk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v  120 (387)
T 3moi_A           88 GLHIIVEKPLTLSRDEADRMIEAVERAGVHLVV  120 (387)
T ss_dssp             TCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred             CCceeeeCCccCCHHHHHHHHHHHHHhCCeEEE
Confidence            776653 22 33455667777777777766544

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.28  E-value=0.00045  Score=54.87  Aligned_cols=82  Identities=21%  Similarity=0.373  Sum_probs=55.7

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHH-HcCCcc--cCCHHHHhccCCEEEEecCChHHHH--HHhcCCcc-c-cc
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLA-KEGANM--ALSLSTLASGAEFIISMLPASQDVL--DAYDGSDG-I-LK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~-~~g~~~--~~~~~~~~~~adiVi~~vp~~~~~~--~v~~~~~~-l-~~   72 (183)
                      ||..+++.|...|. +|+++||++++.+.+. +.|...  .+++.+.+.++|+||.++|.+..+.  ..+   +. + ..
T Consensus       178 iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~~~~l---~~~~lk~  254 (404)
T 1gpj_A          178 MGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIHVDDV---REALRKR  254 (404)
T ss_dssp             HHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBCHHHH---HHHHHHC
T ss_pred             HHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCceecHHHH---HHHHHhc
Confidence            68889999999998 8999999999875544 346432  3467777889999999998765431  111   11 1 10


Q ss_pred             cCCCCcEEEeccC
Q psy755           73 HAKPGVIVIDSST   85 (183)
Q Consensus        73 ~l~~~~iiid~s~   85 (183)
                      .-..+.+++|.+.
T Consensus       255 r~~~~~v~vdia~  267 (404)
T 1gpj_A          255 DRRSPILIIDIAN  267 (404)
T ss_dssp             SSCCCEEEEECCS
T ss_pred             cCCCCEEEEEccC
Confidence            1134567888875

>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}

Probab=97.25  E-value=0.00037  Score=54.03  Aligned_cols=88  Identities=14%  Similarity=0.166  Sum_probs=62.3

Q ss_pred             CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCCCcEEEecc--CC
Q psy755           13 GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSS--TV   86 (183)
Q Consensus        13 g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s--~~   86 (183)
                      +++|+ ++|+++++.+.+.+. +...+++.++++++  .|+|++|+|...+.+.+       ...+..|+.|+.--  +.
T Consensus        28 ~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~-------~~al~aGk~Vl~EKP~a~  100 (345)
T 3f4l_A           28 SWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYA-------KRALEAGKNVLVEKPFTP  100 (345)
T ss_dssp             TEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHHHH-------HHHHHTTCEEEECSSSCS
T ss_pred             CeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHHHH-------HHHHHcCCcEEEeCCCCC
Confidence            56776 789999877544444 56677899999876  89999999987765554       34567888876443  34


Q ss_pred             CchhHHHHHHHHHhcCCcEEe
Q psy755           87 DPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        87 ~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .......+.+..++.|..+.-
T Consensus       101 ~~~e~~~l~~~a~~~g~~~~v  121 (345)
T 3f4l_A          101 TLAQAKELFALAKSKGLTVTP  121 (345)
T ss_dssp             SHHHHHHHHHHHHHHTCCEEE
T ss_pred             CHHHHHHHHHHHHHcCCeEEE
Confidence            556677777777777766543

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=97.22  E-value=0.0014  Score=50.74  Aligned_cols=99  Identities=17%  Similarity=0.132  Sum_probs=67.2

Q ss_pred             cHHHHHHHHhC--CCcE-EEEcCCchhHHHHHHc-CC-cccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            2 GSHMARNLLKN--GHDV-IVYDKNTDASQTLAKE-GA-NMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         2 G~~iA~~l~~~--g~~V-~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      |...+..|.+.  +.++ .++|+++++.+.+.+. ++ ..+++.+++++  +.|+|++++|.....+.+       ...+
T Consensus        31 g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~-------~~al  103 (340)
T 1zh8_A           31 RELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELNLPFI-------EKAL  103 (340)
T ss_dssp             HHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGHHHHH-------HHHH
T ss_pred             HHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchHHHHHH-------HHHH
Confidence            44566667765  4566 4689999998887665 65 56789999886  589999999987665444       2456


Q ss_pred             CCCcEEEecc--CCCchhHHHHHHHHHhcCCcEEe
Q psy755           75 KPGVIVIDSS--TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        75 ~~~~iiid~s--~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..|+.|+---  +........+.+..++.|..+.-
T Consensus       104 ~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v  138 (340)
T 1zh8_A          104 RKGVHVICEKPISTDVETGKKVVELSEKSEKTVYI  138 (340)
T ss_dssp             HTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEE
T ss_pred             HCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence            6777654322  23455566777777777765443

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.21  E-value=0.00027  Score=56.16  Aligned_cols=100  Identities=16%  Similarity=0.233  Sum_probs=64.9

Q ss_pred             CcHHHHHHHHhCCC---cEEEEcCCchhHHHHHHc-------CCc-----c--cCCHHHHhcc--CCEEEEecCChHHHH
Q psy755            1 MGSHMARNLLKNGH---DVIVYDKNTDASQTLAKE-------GAN-----M--ALSLSTLASG--AEFIISMLPASQDVL   61 (183)
Q Consensus         1 mG~~iA~~l~~~g~---~V~~~~~~~~~~~~~~~~-------g~~-----~--~~~~~~~~~~--adiVi~~vp~~~~~~   61 (183)
                      +|+.+++.|++.|.   +|.+++|++++.+.+.+.       .+.     .  .+++.+++++  +|+||.+.|.... .
T Consensus        12 iG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ag~~~~-~   90 (405)
T 4ina_A           12 VGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLNIALPYQD-L   90 (405)
T ss_dssp             HHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEECSCGGGH-H
T ss_pred             HHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEECCCcccC-h
Confidence            58899999999883   899999999988776543       121     1  1234556666  8999999987543 2


Q ss_pred             HHhcCCccccccCCCCcEEEeccCCCch--------hHHHHHHHHHhcCCcEEe
Q psy755           62 DAYDGSDGILKHAKPGVIVIDSSTVDPQ--------VPQTLSNLAREKQITFLD  107 (183)
Q Consensus        62 ~v~~~~~~l~~~l~~~~iiid~s~~~~~--------~~~~~~~~~~~~g~~~~~  107 (183)
                      .+.      ...+..|..++|+++..+.        ....+.+.+++.|..++.
T Consensus        91 ~v~------~a~l~~g~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~  138 (405)
T 4ina_A           91 TIM------EACLRTGVPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALL  138 (405)
T ss_dssp             HHH------HHHHHHTCCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEE
T ss_pred             HHH------HHHHHhCCCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEE
Confidence            232      2345577788887654332        113455666666766555

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.18  E-value=0.00068  Score=51.56  Aligned_cols=80  Identities=20%  Similarity=0.206  Sum_probs=53.5

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHH----HHH----c--C--CcccCCHHHHhccCCEEEEecCChHH-------
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQT----LAK----E--G--ANMALSLSTLASGAEFIISMLPASQD-------   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~----~~~----~--g--~~~~~~~~~~~~~adiVi~~vp~~~~-------   59 (183)
                      ||.++|..|+..|+  +|++||+++++++.    +..    .  .  +..+++ .+++++||+||++.+.++.       
T Consensus        11 vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~~~kpG~~R~d   89 (294)
T 1oju_A           11 VGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGLARKPGMTRLD   89 (294)
T ss_dssp             HHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCCCCCSSCCHHH
T ss_pred             HHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCCCCCCCCcHHH
Confidence            58999999999998  99999999987652    111    1  1  222345 7889999999999855421       


Q ss_pred             --------HHHHhcCCccccccCCCCcEEEeccC
Q psy755           60 --------VLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        60 --------~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                              ++.+.   +.+.+. .++.+++..|+
T Consensus        90 l~~~N~~i~~~i~---~~i~~~-~p~a~iivvsN  119 (294)
T 1oju_A           90 LAHKNAGIIKDIA---KKIVEN-APESKILVVTN  119 (294)
T ss_dssp             HHHHHHHHHHHHH---HHHHTT-STTCEEEECSS
T ss_pred             HHHHHHHHHHHHH---HHHHhh-CCCeEEEEeCC
Confidence                    12222   344444 56777777774

>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*

Probab=97.12  E-value=0.0027  Score=50.95  Aligned_cols=100  Identities=10%  Similarity=0.139  Sum_probs=68.4

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHH----cC---CcccC----CHHHHhc--cCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAK----EG---ANMAL----SLSTLAS--GAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~----~g---~~~~~----~~~~~~~--~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||...+..|.+. +++|+ ++|+++++.+.+.+    .|   ....+    +.+++++  +.|+|++++|...+.+.++ 
T Consensus        31 ~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~h~~~~~-  109 (444)
T 2ixa_A           31 RGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVSSPWEWHHEHGV-  109 (444)
T ss_dssp             HHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEECCCGGGHHHHHH-
T ss_pred             HHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEcCCcHHHHHHHH-
Confidence            456677777764 56765 68999998887654    24   34566    8899887  5899999999877655553 


Q ss_pred             CCccccccCCCCcEEE-ec-cCCCchhHHHHHHHHHhcCCcEEe
Q psy755           66 GSDGILKHAKPGVIVI-DS-STVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        66 ~~~~l~~~l~~~~iii-d~-s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                            ..+..|+.|+ +- -+........+.+..++.|..+.-
T Consensus       110 ------~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v  147 (444)
T 2ixa_A          110 ------AAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLMA  147 (444)
T ss_dssp             ------HHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEEE
T ss_pred             ------HHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEE
Confidence                  4566787655 32 133455667777777777766543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.10  E-value=0.001  Score=50.09  Aligned_cols=62  Identities=19%  Similarity=0.251  Sum_probs=45.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.+|..|.+.|.+|++.++.              +.++++.++++|+||.+++.+..    +   +  .+++++|.+||
T Consensus       174 G~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~~----I---~--~~~vk~GavVI  230 (285)
T 3l07_A          174 GKPVSQLLLNAKATVTTCHRF--------------TTDLKSHTTKADILIVAVGKPNF----I---T--ADMVKEGAVVI  230 (285)
T ss_dssp             HHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCTTC----B---C--GGGSCTTCEEE
T ss_pred             HHHHHHHHHHCCCeEEEEeCC--------------chhHHHhcccCCEEEECCCCCCC----C---C--HHHcCCCcEEE
Confidence            667777777777777666543              24778889999999999987542    2   1  24678999999


Q ss_pred             eccCC
Q psy755           82 DSSTV   86 (183)
Q Consensus        82 d~s~~   86 (183)
                      |.+..
T Consensus       231 Dvgi~  235 (285)
T 3l07_A          231 DVGIN  235 (285)
T ss_dssp             ECCCE
T ss_pred             Eeccc
Confidence            99864

>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}

Probab=97.10  E-value=0.0016  Score=50.59  Aligned_cols=97  Identities=15%  Similarity=0.150  Sum_probs=64.9

Q ss_pred             cHH-HHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            2 GSH-MARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         2 G~~-iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      |.. .+..+.+. +++|+ ++|+++++.+  ... +...+++.++++++  .|+|++++|...+.+.+.       ..+.
T Consensus        19 g~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~-------~al~   89 (352)
T 3kux_A           19 SKTFHAPLIMGTPGLELAGVSSSDASKVH--ADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQ-------SALA   89 (352)
T ss_dssp             HHHTHHHHHHTSTTEEEEEEECSCHHHHH--TTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHHH-------HHHH
T ss_pred             HHHHHHHHHhhCCCcEEEEEECCCHHHHH--hhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHHH-------HHHH
Confidence            443 45556555 56766 6899998765  222 55667899999875  999999999977665552       4566


Q ss_pred             CCcEEE-ecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIVI-DSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|+.|+ +-- +........+.+..++.|..+.-
T Consensus        90 aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v  123 (352)
T 3kux_A           90 AGKHVVVDKPFTVTLSQANALKEHADDAGLLLSV  123 (352)
T ss_dssp             TTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence            787654 333 34555667777777777765443

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=97.07  E-value=0.0016  Score=52.69  Aligned_cols=56  Identities=11%  Similarity=0.227  Sum_probs=41.2

Q ss_pred             cHHHHHHHHhC-----CCcEEEEcCCchhHHHHHH--------c--C--CcccCCHHHHhccCCEEEEecCCh
Q psy755            2 GSHMARNLLKN-----GHDVIVYDKNTDASQTLAK--------E--G--ANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         2 G~~iA~~l~~~-----g~~V~~~~~~~~~~~~~~~--------~--g--~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      |.++|..|++.     +.+|++||+++++++....        .  .  +..+++..+++++||+||+++|.+
T Consensus        41 ~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~VViaag~~  113 (472)
T 1u8x_X           41 TPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMAHIRVG  113 (472)
T ss_dssp             HHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEEECCCTT
T ss_pred             HHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEEEEcCCCc
Confidence            44567778777     6689999999987655322        1  1  233467888899999999999874

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=97.06  E-value=0.0012  Score=50.14  Aligned_cols=63  Identities=22%  Similarity=0.248  Sum_probs=45.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.+|+.|.+.|.+|++.++.              +.++.+.+++||+||.+++.+..    +   +  .+++++|.+||
T Consensus       178 G~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~~----I---~--~~~vk~GavVI  234 (301)
T 1a4i_A          178 GAPMHDLLLWNNATVTTCHSK--------------TAHLDEEVNKGDILVVATGQPEM----V---K--GEWIKPGAIVI  234 (301)
T ss_dssp             HHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCTTC----B---C--GGGSCTTCEEE
T ss_pred             HHHHHHHHHhCCCeEEEEECC--------------cccHHHHhccCCEEEECCCCccc----C---C--HHHcCCCcEEE
Confidence            566666666666666666532              35788889999999999988652    2   1  23567999999


Q ss_pred             eccCCC
Q psy755           82 DSSTVD   87 (183)
Q Consensus        82 d~s~~~   87 (183)
                      |.+...
T Consensus       235 DVgi~~  240 (301)
T 1a4i_A          235 DCGINY  240 (301)
T ss_dssp             ECCCBC
T ss_pred             EccCCC
Confidence            999754

>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*

Probab=97.04  E-value=0.0088  Score=47.97  Aligned_cols=96  Identities=11%  Similarity=0.097  Sum_probs=60.2

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc--C----------------------CcccCCHHHHhc--cCCEEEE
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE--G----------------------ANMALSLSTLAS--GAEFIIS   52 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~--g----------------------~~~~~~~~~~~~--~adiVi~   52 (183)
                      ||+.++..+.+. +.+|+ ++|+++++.+.+.+.  |                      ...+++.+++++  +.|+|++
T Consensus        34 iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~eeLL~d~dIDaVvi  113 (446)
T 3upl_A           34 MGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDLILSNPLIDVIID  113 (446)
T ss_dssp             HHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHHHHTCTTCCEEEE
T ss_pred             HHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHHHhcCCCCCEEEE
Confidence            567777777654 45655 579999988776542  3                      235678889887  5899999


Q ss_pred             ecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchh---HHHHHHHHHhcCCc
Q psy755           53 MLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQV---PQTLSNLAREKQIT  104 (183)
Q Consensus        53 ~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~---~~~~~~~~~~~g~~  104 (183)
                      ++|.+..-..+      ....+..|+.|+-..  .+.+   ...+.+..++.|..
T Consensus       114 aTp~p~~H~e~------a~~AL~AGKHVv~~n--k~l~~~eg~eL~~~A~e~Gvv  160 (446)
T 3upl_A          114 ATGIPEVGAET------GIAAIRNGKHLVMMN--VEADVTIGPYLKAQADKQGVI  160 (446)
T ss_dssp             CSCCHHHHHHH------HHHHHHTTCEEEECC--HHHHHHHHHHHHHHHHHHTCC
T ss_pred             cCCChHHHHHH------HHHHHHcCCcEEecC--cccCHHHHHHHHHHHHHhCCe
Confidence            99886432222      245677899888432  2222   23444444445544

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.02  E-value=0.0012  Score=49.68  Aligned_cols=63  Identities=30%  Similarity=0.312  Sum_probs=45.8

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.+|..|.+.|..|++.++.              +.++++.+++||+||.+++.+..    +   +  .+++++|.+||
T Consensus       173 G~p~A~lL~~~gAtVtv~h~~--------------t~~L~~~~~~ADIVI~Avg~p~~----I---~--~~~vk~GavVI  229 (285)
T 3p2o_A          173 GRPMATMLLNAGATVSVCHIK--------------TKDLSLYTRQADLIIVAAGCVNL----L---R--SDMVKEGVIVV  229 (285)
T ss_dssp             HHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHTTCSEEEECSSCTTC----B---C--GGGSCTTEEEE
T ss_pred             HHHHHHHHHHCCCeEEEEeCC--------------chhHHHHhhcCCEEEECCCCCCc----C---C--HHHcCCCeEEE
Confidence            666777777777777766543              24788889999999999987542    2   1  24678999999


Q ss_pred             eccCCC
Q psy755           82 DSSTVD   87 (183)
Q Consensus        82 d~s~~~   87 (183)
                      |.+...
T Consensus       230 DVgi~~  235 (285)
T 3p2o_A          230 DVGINR  235 (285)
T ss_dssp             ECCCEE
T ss_pred             EeccCc
Confidence            998643

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.97  E-value=0.00015  Score=55.65  Aligned_cols=78  Identities=18%  Similarity=0.250  Sum_probs=53.8

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhH----HHHHHcCCcc-----c--CCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDAS----QTLAKEGANM-----A--LSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~----~~~~~~g~~~-----~--~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      |+.+|+.|.+.|.+|++.||+..+.    +.+.......     +  .++.+.+.++|+||.+++.+..   ++.     
T Consensus       190 G~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~---vI~-----  261 (320)
T 1edz_A          190 GRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENY---KFP-----  261 (320)
T ss_dssp             HHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTC---CBC-----
T ss_pred             HHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECCCCCcc---eeC-----
Confidence            8899999999999999999984321    1111110111     1  4678889999999999987542   121     


Q ss_pred             cccCCCCcEEEeccCCC
Q psy755           71 LKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~   87 (183)
                      .+.+++|.+|+|.+...
T Consensus       262 ~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          262 TEYIKEGAVCINFACTK  278 (320)
T ss_dssp             TTTSCTTEEEEECSSSC
T ss_pred             HHHcCCCeEEEEcCCCc
Confidence            23467899999998753

>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}

Probab=96.96  E-value=0.0078  Score=46.89  Aligned_cols=97  Identities=14%  Similarity=0.125  Sum_probs=67.0

Q ss_pred             HHHHHHHhCCCcEE-EEcCCchhHHHHHHc-C-CcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            4 HMARNLLKNGHDVI-VYDKNTDASQTLAKE-G-ANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         4 ~iA~~l~~~g~~V~-~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      .++..+...+.+++ ++|+++++.+.+.+. + ...+++.++++++  .|+|++++|...+.+.+       ...+..|+
T Consensus        41 ~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~-------~~al~aGk  113 (361)
T 3u3x_A           41 GQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAELA-------IRAMQHGK  113 (361)
T ss_dssp             HHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHHHH-------HHHHHTTC
T ss_pred             HHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHHHH-------HHHHHCCC
Confidence            35556666788865 679999998887765 4 4567899999875  89999999987665444       34566787


Q ss_pred             EEEe-cc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           79 IVID-SS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        79 iiid-~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|+- -= +........+.+..++.|..+.-
T Consensus       114 hVl~EKPla~~~~ea~~l~~~a~~~g~~l~v  144 (361)
T 3u3x_A          114 DVLVDKPGMTSFDQLAKLRRVQAETGRIFSI  144 (361)
T ss_dssp             EEEEESCSCSSHHHHHHHHHHHHTTCCCEEE
T ss_pred             eEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            6652 21 33455666777777776765433

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.94  E-value=0.0015  Score=50.44  Aligned_cols=57  Identities=19%  Similarity=0.254  Sum_probs=42.0

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHH----HHHc------CCcccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQT----LAKE------GANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~----~~~~------g~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      ||.++|..|+..|+  +|+++|+++++++.    +...      ++....+..+.+++||+||++...+
T Consensus        16 vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~p   84 (326)
T 3pqe_A           16 VGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGAN   84 (326)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSCC
T ss_pred             HHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecccC
Confidence            58999999999887  89999999987665    3321      2222333456789999999998543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.91  E-value=0.0024  Score=49.22  Aligned_cols=55  Identities=22%  Similarity=0.250  Sum_probs=40.8

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHH----HHH------cCCc--ccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQT----LAK------EGAN--MALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~----~~~------~g~~--~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||.++|..|+..|+ +|++||+++++++.    +..      ....  .+++. +++++||+||++.+.
T Consensus        18 vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag~   85 (324)
T 3gvi_A           18 IGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAGV   85 (324)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCSC
T ss_pred             HHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccCc
Confidence            58899999999999 99999999987642    111      1222  23444 788999999999753

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.90  E-value=0.0009  Score=51.64  Aligned_cols=80  Identities=18%  Similarity=0.130  Sum_probs=54.2

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHH----c-------CCcccCCHHHHhccCCEEEEecCChH---------
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAK----E-------GANMALSLSTLASGAEFIISMLPASQ---------   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~----~-------g~~~~~~~~~~~~~adiVi~~vp~~~---------   58 (183)
                      ||.++|..|+..|+  +|+++|+++++++....    .       .+...++.++ +++||+||++...++         
T Consensus        32 vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG~p~kpG~tR~dl  110 (330)
T 3ldh_A           32 VGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAGARQQEGESRLNL  110 (330)
T ss_dssp             HHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCSCCCCSSCCTTGG
T ss_pred             HHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCCCCCCCCCCHHHH
Confidence            68999999999987  89999999987654321    1       1223445555 899999999975432         


Q ss_pred             ------HHHHHhcCCccccccCCCCcEEEeccC
Q psy755           59 ------DVLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        59 ------~~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                            .++.+.   +.+.+. .++.+++..|+
T Consensus       111 l~~N~~I~k~i~---~~I~k~-~P~a~ilvvtN  139 (330)
T 3ldh_A          111 VQRNVNIFKFII---PNIVKH-SPDCLKELHPE  139 (330)
T ss_dssp             GHHHHHHHHHHH---HHHHHH-CTTCEEEECSS
T ss_pred             HHhhHHHHHHHH---HHHHhh-CCCceEEeCCC
Confidence                  123333   455555 67777777775

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.90  E-value=0.0016  Score=49.98  Aligned_cols=81  Identities=12%  Similarity=0.130  Sum_probs=49.0

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHH-Hc--C------CcccCCHHHHhccCCEEEEecCChHH----------
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLA-KE--G------ANMALSLSTLASGAEFIISMLPASQD----------   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~-~~--g------~~~~~~~~~~~~~adiVi~~vp~~~~----------   59 (183)
                      +|.+++..|+..|+  +|+++|+++++++... ..  .      .....+..+.+++||+||++++.+..          
T Consensus        18 vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p~k~g~~r~dl~~   97 (318)
T 1y6j_A           18 VGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAK   97 (318)
T ss_dssp             HHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC------CHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCCCCCCcCHHHHHH
Confidence            47889999999988  8999999987755322 11  1      11222335678999999999987642          


Q ss_pred             -----HHHHhcCCccccccCCCCcEEEeccC
Q psy755           60 -----VLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        60 -----~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                           ++.+.   +.+.+. .++.+++..|+
T Consensus        98 ~n~~i~~~i~---~~i~~~-~p~a~viv~tN  124 (318)
T 1y6j_A           98 KNVMIAKEVT---QNIMKY-YNHGVILVVSN  124 (318)
T ss_dssp             HHHHHHHHHH---HHHHHH-CCSCEEEECSS
T ss_pred             hhHHHHHHHH---HHHHHh-CCCcEEEEecC
Confidence                 23333   455554 46777776654

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.88  E-value=0.0013  Score=49.53  Aligned_cols=63  Identities=25%  Similarity=0.263  Sum_probs=45.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.+|+.|.+.|.+|++.++..              .++.+.++++|+||.+++.+.    ++.     .+++++|.+||
T Consensus       172 G~p~A~lL~~~gAtVtv~hs~t--------------~~L~~~~~~ADIVI~Avg~p~----lI~-----~~~vk~GavVI  228 (288)
T 1b0a_A          172 GRPMSMELLLAGCTTTVTHRFT--------------KNLRHHVENADLLIVAVGKPG----FIP-----GDWIKEGAIVI  228 (288)
T ss_dssp             HHHHHHHHHTTTCEEEEECSSC--------------SCHHHHHHHCSEEEECSCCTT----CBC-----TTTSCTTCEEE
T ss_pred             HHHHHHHHHHCCCeEEEEeCCc--------------hhHHHHhccCCEEEECCCCcC----cCC-----HHHcCCCcEEE
Confidence            5666666666666666665332              477888999999999998765    221     23568999999


Q ss_pred             eccCCC
Q psy755           82 DSSTVD   87 (183)
Q Consensus        82 d~s~~~   87 (183)
                      |.+...
T Consensus       229 DVgi~r  234 (288)
T 1b0a_A          229 DVGINR  234 (288)
T ss_dssp             ECCCEE
T ss_pred             EccCCc
Confidence            999643

>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*

Probab=96.88  E-value=0.00098  Score=51.22  Aligned_cols=92  Identities=9%  Similarity=0.126  Sum_probs=59.4

Q ss_pred             CcHHHHHHHHhC-CCcE-EEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKN-GHDV-IVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+.+++.|.+. +.++ .++|+++++  .+. .|+...+++++++.++|+|++++|+....+.+       ...+..|+
T Consensus        14 mG~~~~~~l~~~~~~elvav~d~~~~~--~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~~~~-------~~al~aG~   83 (320)
T 1f06_A           14 LGRSVEKLIAKQPDMDLVGIFSRRATL--DTK-TPVFDVADVDKHADDVDVLFLCMGSATDIPEQ-------APKFAQFA   83 (320)
T ss_dssp             HHHHHHHHHTTCSSEEEEEEEESSSCC--SSS-SCEEEGGGGGGTTTTCSEEEECSCTTTHHHHH-------HHHHTTTS
T ss_pred             HHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc-CCCceeCCHHHHhcCCCEEEEcCCcHHHHHHH-------HHHHHCCC
Confidence            688889988876 4565 468998665  221 35545567777777899999999986555444       34566788


Q ss_pred             EEEeccCCCc--hhH-HHHHHHHHhcC
Q psy755           79 IVIDSSTVDP--QVP-QTLSNLAREKQ  102 (183)
Q Consensus        79 iiid~s~~~~--~~~-~~~~~~~~~~g  102 (183)
                      .+++......  ... ..+.+..++.+
T Consensus        84 ~Vv~ekp~~~~~~~~~~~l~~~a~~~~  110 (320)
T 1f06_A           84 CTVDTYDNHRDIPRHRQVMNEAATAAG  110 (320)
T ss_dssp             EEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred             EEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence            8887664422  222 44455444333

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.85  E-value=0.0023  Score=48.15  Aligned_cols=63  Identities=27%  Similarity=0.267  Sum_probs=44.1

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.+|..|.+.|..|++..+.              +.++++.+++||+||.+++.+..    +   +  .+++++|.+||
T Consensus       174 G~plA~lL~~~gAtVtv~hs~--------------T~~L~~~~~~ADIVI~Avg~p~~----I---~--~~~vk~GavVI  230 (286)
T 4a5o_A          174 GRPMALELLLGGCTVTVTHRF--------------TRDLADHVSRADLVVVAAGKPGL----V---K--GEWIKEGAIVI  230 (286)
T ss_dssp             HHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHHTCSEEEECCCCTTC----B---C--GGGSCTTCEEE
T ss_pred             HHHHHHHHHHCCCeEEEEeCC--------------CcCHHHHhccCCEEEECCCCCCC----C---C--HHHcCCCeEEE
Confidence            556666666666666655432              24778889999999999987542    2   1  24678999999


Q ss_pred             eccCCC
Q psy755           82 DSSTVD   87 (183)
Q Consensus        82 d~s~~~   87 (183)
                      |.+...
T Consensus       231 Dvgi~~  236 (286)
T 4a5o_A          231 DVGINR  236 (286)
T ss_dssp             ECCSCS
T ss_pred             Eecccc
Confidence            998654

>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*

Probab=96.84  E-value=0.0014  Score=49.72  Aligned_cols=97  Identities=13%  Similarity=0.125  Sum_probs=62.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH-HHHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS-QTLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||..+++.+.+.|++ .++..++.+. +.  ..|...+++++++.+  ..|++++++|.....+.+    ++..   ..|
T Consensus        19 ~G~~~~~~l~~~g~~-~V~~V~p~~~g~~--~~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~----~ea~---~~G   88 (288)
T 2nu8_A           19 QGTFHSEQAIAYGTK-MVGGVTPGKGGTT--HLGLPVFNTVREAVAATGATASVIYVPAPFCKDSI----LEAI---DAG   88 (288)
T ss_dssp             HHHHHHHHHHHHTCE-EEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHH----HHHH---HTT
T ss_pred             HHHHHHHHHHHCCCe-EEEEeCCCcccce--eCCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHH----HHHH---HCC
Confidence            577888888888998 3455555422 11  236677788999887  899999999986654444    3333   344


Q ss_pred             c-EEEeccCCC-chhHHHHHHHHHhcCCcEEe
Q psy755           78 V-IVIDSSTVD-PQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        78 ~-iiid~s~~~-~~~~~~~~~~~~~~g~~~~~  107 (183)
                      . .++..+... ..+...+.+..++.|+.++.
T Consensus        89 i~~iVi~t~G~~~~~~~~l~~~A~~~gv~liG  120 (288)
T 2nu8_A           89 IKLIITITEGIPTLDMLTVKVKLDEAGVRMIG  120 (288)
T ss_dssp             CSEEEECCCCCCHHHHHHHHHHHHHHTCEEEC
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence            3 334455443 34456777777777876663

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.83  E-value=0.0026  Score=48.75  Aligned_cols=58  Identities=16%  Similarity=0.192  Sum_probs=40.5

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHH----c------CCcccCCHHHHhccCCEEEEecCChH
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAK----E------GANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~----~------g~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      ||.++|..|+..|.  +|+++|+++++.+....    .      ......+..+.+++||+||++.|.++
T Consensus        17 vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~~~   86 (316)
T 1ldn_A           17 VGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGANQ   86 (316)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCCCC
Confidence            58899999988775  89999999876543211    1      11122234567899999999986653

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2

Probab=96.83  E-value=0.0034  Score=50.51  Aligned_cols=57  Identities=12%  Similarity=0.246  Sum_probs=40.5

Q ss_pred             cHHHHHHHHhC-----CCcEEEEcCCc--hhHHHHHH--------c--C--CcccCCHHHHhccCCEEEEecCChH
Q psy755            2 GSHMARNLLKN-----GHDVIVYDKNT--DASQTLAK--------E--G--ANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         2 G~~iA~~l~~~-----g~~V~~~~~~~--~~~~~~~~--------~--g--~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      |.+++..|++.     +.+|++||+++  ++++....        .  .  +..+++..+++++||+||+++|.+.
T Consensus        20 ~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~VVitagv~~   95 (450)
T 1s6y_A           20 TPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVTTQFRVGG   95 (450)
T ss_dssp             HHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCTTH
T ss_pred             HHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCEEEEcCCCCC
Confidence            55667777763     56899999999  77654211        1  1  2334677888999999999998653

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.81  E-value=0.0073  Score=44.55  Aligned_cols=72  Identities=15%  Similarity=0.231  Sum_probs=50.4

Q ss_pred             CcHHHHHHHHhCCCcEEE-EcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIV-YDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+.+++.+.+.+++++. +|++++.     ..|+..+++++++. ++|+||-.+++ ......+   +     +..|..
T Consensus        14 MG~~i~~~l~~~~~eLva~~d~~~~~-----~~gv~v~~dl~~l~-~~DVvIDft~p-~a~~~~~---~-----l~~g~~   78 (243)
T 3qy9_A           14 MNQRVARLAEEKGHEIVGVIENTPKA-----TTPYQQYQHIADVK-GADVAIDFSNP-NLLFPLL---D-----EDFHLP   78 (243)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECSCH-HHHHHHH---T-----SCCCCC
T ss_pred             HHHHHHHHHHhCCCEEEEEEecCccc-----cCCCceeCCHHHHh-CCCEEEEeCCh-HHHHHHH---H-----HhcCCc
Confidence            799999999988777664 7988763     35777788888887 99999865543 3344443   2     667777


Q ss_pred             EEeccCCC
Q psy755           80 VIDSSTVD   87 (183)
Q Consensus        80 iid~s~~~   87 (183)
                      ++..++..
T Consensus        79 vVigTTG~   86 (243)
T 3qy9_A           79 LVVATTGE   86 (243)
T ss_dssp             EEECCCSS
T ss_pred             eEeCCCCC
Confidence            77666654

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=96.80  E-value=0.0012  Score=50.44  Aligned_cols=80  Identities=10%  Similarity=0.147  Sum_probs=50.8

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchh---HHHHHHc---CCcccCCHHHHhccCCEEEEecCCh-------------HH
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDA---SQTLAKE---GANMALSLSTLASGAEFIISMLPAS-------------QD   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~---~~~~~~~---g~~~~~~~~~~~~~adiVi~~vp~~-------------~~   59 (183)
                      ||..+|..|+..|+  +|+++|++++.   ...+...   .+..+.+. +.+++||+||++...+             ..
T Consensus        25 vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~  103 (303)
T 2i6t_A           25 LGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQSYLDVVQSNVD  103 (303)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----CCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCCCHHHHHHHHHH
Confidence            57889999999998  99999999852   1122222   23344566 6689999999997322             11


Q ss_pred             -HHHHhcCCccccccCCCCcEEEeccC
Q psy755           60 -VLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        60 -~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                       .+.++   +.+.+.- ++.+++..|+
T Consensus       104 i~~~i~---~~i~~~~-p~a~iiv~sN  126 (303)
T 2i6t_A          104 MFRALV---PALGHYS-QHSVLLVASQ  126 (303)
T ss_dssp             HHHHHH---HHHHHHT-TTCEEEECSS
T ss_pred             HHHHHH---HHHHHhC-CCeEEEEcCC
Confidence             23333   5555554 6777777776

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.79  E-value=0.0081  Score=46.38  Aligned_cols=95  Identities=12%  Similarity=0.116  Sum_probs=64.6

Q ss_pred             HHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCc-ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            6 ARNLLKN-GHDVI-VYDKNTDASQTLAKE-GAN-MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         6 A~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +..+.+. +.+|+ ++|+++++++.+.+. |+. .+++.+++++  +.|+|++|+|...+.+.++       ..+..|+.
T Consensus        40 ~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~~~-------~al~aGkh  112 (350)
T 4had_A           40 VPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSI-------KAADAGKH  112 (350)
T ss_dssp             HHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGHHHHHH-------HHHHTTCE
T ss_pred             HHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchhHHHHH-------HHHhcCCE
Confidence            3445554 55766 579999998887665 764 5789999885  4799999999977665553       45567776


Q ss_pred             EEec-c-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           80 VIDS-S-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        80 iid~-s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |+-- = +......+.+.+..++.|..+.-
T Consensus       113 Vl~EKPla~~~~ea~~l~~~a~~~~~~l~v  142 (350)
T 4had_A          113 VVCEKPLALKAGDIDAVIAARDRNKVVVTE  142 (350)
T ss_dssp             EEECSCCCSSGGGGHHHHHHHHHHTCCEEE
T ss_pred             EEEeCCcccchhhHHHHHHHHHHcCCceeE
Confidence            6521 1 23445667777777777765444

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.79  E-value=0.0017  Score=47.32  Aligned_cols=79  Identities=15%  Similarity=0.197  Sum_probs=52.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc----cCCHH---HH-hccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM----ALSLS---TL-ASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~---~~-~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      +|..+++.|.+.|+ |++.|+++++++.+. .+...    ..+.+   ++ ++++|.||+++++...-..+    .....
T Consensus        20 ~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~----~~~a~   93 (234)
T 2aef_A           20 STLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHC----ILGIR   93 (234)
T ss_dssp             HHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHHHH----HHHHH
T ss_pred             HHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHHHH----HHHHH
Confidence            37889999999999 999999999988776 55321    11222   22 57899999999886433333    22333


Q ss_pred             cCCCC-cEEEeccC
Q psy755           73 HAKPG-VIVIDSST   85 (183)
Q Consensus        73 ~l~~~-~iiid~s~   85 (183)
                      .+.++ .++...++
T Consensus        94 ~~~~~~~iia~~~~  107 (234)
T 2aef_A           94 KIDESVRIIAEAER  107 (234)
T ss_dssp             HHCSSSEEEEECSS
T ss_pred             HHCCCCeEEEEECC
Confidence            44455 66665544

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.78  E-value=0.0034  Score=48.25  Aligned_cols=57  Identities=12%  Similarity=0.134  Sum_probs=41.0

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHH----HH------cCCccc-CCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTL----AK------EGANMA-LSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~----~~------~g~~~~-~~~~~~~~~adiVi~~vp~~   57 (183)
                      ||.++|..|+..|+ +|++||+++++++..    ..      ...... ++..+.+++||+||++.+.+
T Consensus        16 vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~p   84 (321)
T 3p7m_A           16 IGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGVP   84 (321)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSCC
T ss_pred             HHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCcC
Confidence            58899999999988 999999999876532    11      122222 23357889999999997543

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.78  E-value=0.0023  Score=48.11  Aligned_cols=62  Identities=19%  Similarity=0.319  Sum_probs=44.7

Q ss_pred             cHHHHHHHHhC--CCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            2 GSHMARNLLKN--GHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         2 G~~iA~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      |+.+|..|.+.  |..|++.++..              .++.+.++++|+||.+++.+..    +   +  .+++++|.+
T Consensus       171 G~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p~~----I---~--~~~vk~Gav  227 (281)
T 2c2x_A          171 GRPLGLLLTRRSENATVTLCHTGT--------------RDLPALTRQADIVVAAVGVAHL----L---T--ADMVRPGAA  227 (281)
T ss_dssp             HHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHHTTCSEEEECSCCTTC----B---C--GGGSCTTCE
T ss_pred             HHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHHhhCCEEEECCCCCcc----c---C--HHHcCCCcE
Confidence            66667666666  56666665333              4788889999999999987652    2   1  235678999


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      |||.+..
T Consensus       228 VIDVgi~  234 (281)
T 2c2x_A          228 VIDVGVS  234 (281)
T ss_dssp             EEECCEE
T ss_pred             EEEccCC
Confidence            9999864

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.76  E-value=0.0029  Score=48.52  Aligned_cols=57  Identities=11%  Similarity=0.107  Sum_probs=41.5

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHH----HH------cCCccc-CCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTL----AK------EGANMA-LSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~----~~------~g~~~~-~~~~~~~~~adiVi~~vp~~   57 (183)
                      ||.++|..|+..|+  +|+++|+++++++..    ..      ...... .+..+.+++||+||++.+.+
T Consensus        11 vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~   80 (314)
T 3nep_X           11 VGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP   80 (314)
T ss_dssp             HHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred             HHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence            68999999998887  899999999875421    11      122222 35567789999999998665

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=96.76  E-value=0.0016  Score=52.71  Aligned_cols=55  Identities=16%  Similarity=0.282  Sum_probs=40.8

Q ss_pred             cHHHHHHHHhC----CCcEEEEcCCchhHHHHHHc------------CCcccCCHHHHhccCCEEEEecCC
Q psy755            2 GSHMARNLLKN----GHDVIVYDKNTDASQTLAKE------------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         2 G~~iA~~l~~~----g~~V~~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      |.+++..|++.    |++|++||+++++++.....            .+..+++..+++++||+||+++|.
T Consensus        17 g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VIiaagv   87 (480)
T 1obb_A           17 SLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMV   87 (480)
T ss_dssp             HHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCT
T ss_pred             HHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEEECCCc
Confidence            45667777754    88999999999886653321            123356777889999999999986

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.72  E-value=0.0028  Score=48.64  Aligned_cols=57  Identities=18%  Similarity=0.159  Sum_probs=38.9

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCC--chhHHHHH----H------cCCccc-CCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKN--TDASQTLA----K------EGANMA-LSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~--~~~~~~~~----~------~g~~~~-~~~~~~~~~adiVi~~vp~~   57 (183)
                      ||.++|..|+..|+ +|++||++  +++.+...    .      ...... ++..+.+++||+||++...+
T Consensus        19 vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaag~p   89 (315)
T 3tl2_A           19 TGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITAGIA   89 (315)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCSCC
T ss_pred             HHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeCCCC
Confidence            68999999999999 99999999  44433211    0      111221 22356789999999998443

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.71  E-value=0.0023  Score=48.88  Aligned_cols=80  Identities=16%  Similarity=0.177  Sum_probs=52.9

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHH--------c--CC--cccCCHHHHhccCCEEEEecCChHH--------
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAK--------E--GA--NMALSLSTLASGAEFIISMLPASQD--------   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~--------~--g~--~~~~~~~~~~~~adiVi~~vp~~~~--------   59 (183)
                      ||.+++..|+..|+ +|+++|+++++++....        .  ..  ..+.+. +.+++||+||++.+.++.        
T Consensus        10 vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~k~G~~r~dl   88 (308)
T 2d4a_B           10 VGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGRKPGMTREQL   88 (308)
T ss_dssp             HHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCCCSSCCTHHH
T ss_pred             HHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCCCCCCcHHHH
Confidence            58889999988888 79999999887654211        1  22  222454 678999999999765531        


Q ss_pred             -------HHHHhcCCccccccCCCCcEEEeccC
Q psy755           60 -------VLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        60 -------~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                             ++.+.   +.+.+. .++.+++..|+
T Consensus        89 ~~~n~~i~~~i~---~~i~~~-~p~a~iiv~tN  117 (308)
T 2d4a_B           89 LEANANTMADLA---EKIKAY-AKDAIVVITTN  117 (308)
T ss_dssp             HHHHHHHHHHHH---HHHHHH-CTTCEEEECCS
T ss_pred             HHHHHHHHHHHH---HHHHHH-CCCeEEEEeCC
Confidence                   33443   555554 36666666665

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=96.67  E-value=0.0017  Score=52.20  Aligned_cols=55  Identities=20%  Similarity=0.245  Sum_probs=43.0

Q ss_pred             cHHHHHHHHh----CCCcEEEEcCCchhHHHHHHc---------CCcccCCHHHHhccCCEEEEecCCh
Q psy755            2 GSHMARNLLK----NGHDVIVYDKNTDASQTLAKE---------GANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         2 G~~iA~~l~~----~g~~V~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      |.+|+..|+.    .| +|++||++++++++....         .+..++++++++++||+||++++.+
T Consensus        19 g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~airvG   86 (450)
T 3fef_A           19 ARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIISILPG   86 (450)
T ss_dssp             HHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEECCCSS
T ss_pred             HHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEeccccC
Confidence            4678888886    56 999999999887665432         2445678899999999999999753

>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}

Probab=96.67  E-value=0.0022  Score=48.70  Aligned_cols=96  Identities=18%  Similarity=0.237  Sum_probs=63.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH-HHHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS-QTLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||..+.+.+.+.|++ .+|..+|.+. +.  -.|...+.++.++.+  .+|++++++|.... ..++   ++..+   .|
T Consensus        25 ~G~~~~~~l~~~g~~-~V~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~-~~~v---~ea~~---~G   94 (294)
T 2yv1_A           25 QGSFHTKKMLECGTK-IVGGVTPGKGGQN--VHGVPVFDTVKEAVKETDANASVIFVPAPFA-KDAV---FEAID---AG   94 (294)
T ss_dssp             HHHHHHHHHHHTTCC-EEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCHHHH-HHHH---HHHHH---TT
T ss_pred             HHHHHHHHHHhCCCe-EEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCEEEEccCHHHH-HHHH---HHHHH---CC
Confidence            477788999999998 5566666532 11  136777889999887  89999999987554 4443   33333   34


Q ss_pred             cE-EEeccCCCc-hhHHHHHHHHHhcCCcEE
Q psy755           78 VI-VIDSSTVDP-QVPQTLSNLAREKQITFL  106 (183)
Q Consensus        78 ~i-iid~s~~~~-~~~~~~~~~~~~~g~~~~  106 (183)
                      .- ++..++..+ .....+.+..++.|+.++
T Consensus        95 i~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi  125 (294)
T 2yv1_A           95 IELIVVITEHIPVHDTMEFVNYAEDVGVKII  125 (294)
T ss_dssp             CSEEEECCSCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence            32 444454444 345677777777787666

>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}

Probab=96.67  E-value=0.0041  Score=48.76  Aligned_cols=84  Identities=12%  Similarity=0.099  Sum_probs=59.7

Q ss_pred             EEEcCCchhHHHHHHc-CCc-ccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCCCcEEEecc--CCCchh
Q psy755           17 IVYDKNTDASQTLAKE-GAN-MALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSS--TVDPQV   90 (183)
Q Consensus        17 ~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s--~~~~~~   90 (183)
                      .++|+++++.+.+.+. |+. .+++.++++++  .|+|++++|...+.+.+       ...+..|+.|+--=  ......
T Consensus        50 av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h~~~~-------~~al~~Gk~V~~EKP~a~~~~~  122 (383)
T 3oqb_A           50 ILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDTMFFDAATTQARPGLL-------TQAINAGKHVYCEKPIATNFEE  122 (383)
T ss_dssp             EEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCCEEEECSCSSSSHHHH-------HHHHTTTCEEEECSCSCSSHHH
T ss_pred             EEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEECCCchHHHHHH-------HHHHHCCCeEEEcCCCCCCHHH
Confidence            3899999998887654 663 57899999865  89999999987665444       35677888876221  234556


Q ss_pred             HHHHHHHHHhcCCcEEe
Q psy755           91 PQTLSNLAREKQITFLD  107 (183)
Q Consensus        91 ~~~~~~~~~~~g~~~~~  107 (183)
                      ...+.+..++.|..+.-
T Consensus       123 ~~~l~~~a~~~~~~~~v  139 (383)
T 3oqb_A          123 ALEVVKLANSKGVKHGT  139 (383)
T ss_dssp             HHHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHHHcCCeEEE
Confidence            67777777777765443

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A

Probab=96.66  E-value=0.0065  Score=47.23  Aligned_cols=94  Identities=16%  Similarity=0.161  Sum_probs=62.5

Q ss_pred             HHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            5 MARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         5 iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      .+..+.+. +++|+ ++|+++++..  .+. +...+++.+++++  +.|+|++|+|...+.+.+       ...+..|+.
T Consensus        21 ~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~-------~~al~aGkh   91 (358)
T 3gdo_A           21 HGPLLDVLDEYQISKIMTSRTEEVK--RDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHT-------MACIQAGKH   91 (358)
T ss_dssp             THHHHTTCTTEEEEEEECSCHHHHH--HHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHH-------HHHHHTTCE
T ss_pred             HHHHHhhCCCeEEEEEEcCCHHHHH--hhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHH-------HHHHHcCCe
Confidence            34455554 56765 6799987632  233 5566789999987  789999999997766555       345667877


Q ss_pred             EEecc--CCCchhHHHHHHHHHhcCCcEEe
Q psy755           80 VIDSS--TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        80 iid~s--~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |+---  +........+.+..++.|..+.-
T Consensus        92 Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v  121 (358)
T 3gdo_A           92 VVMEKPMTATAEEGETLKRAADEKGVLLSV  121 (358)
T ss_dssp             EEEESSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             EEEecCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence            65322  34455667777777777765443

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.57  E-value=0.0067  Score=46.52  Aligned_cols=81  Identities=14%  Similarity=0.176  Sum_probs=52.1

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHH-H---H------cCCcccCCHHHHhccCCEEEEecCChHH---------
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTL-A---K------EGANMALSLSTLASGAEFIISMLPASQD---------   59 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~-~---~------~g~~~~~~~~~~~~~adiVi~~vp~~~~---------   59 (183)
                      +|.+++..|+..|.  +|+++|+++++++.. .   .      .......+..+.+++||+||++++.+..         
T Consensus        17 vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~~~~~g~~r~dl~   96 (317)
T 3d0o_A           17 VGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLV   96 (317)
T ss_dssp             HHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCCCCCTTCCHHHHH
T ss_pred             HHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCCCCCCCCcHHHHH
Confidence            37888888888885  899999998766532 1   1      1122222456778999999999966531         


Q ss_pred             ------HHHHhcCCccccccCCCCcEEEeccC
Q psy755           60 ------VLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        60 ------~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                            ++.+.   +.+.+. .++.+++..|+
T Consensus        97 ~~n~~i~~~i~---~~i~~~-~p~a~viv~tN  124 (317)
T 3d0o_A           97 SKNLKIFKSIV---GEVMAS-KFDGIFLVATN  124 (317)
T ss_dssp             HHHHHHHHHHH---HHHHHT-TCCSEEEECSS
T ss_pred             HHHHHHHHHHH---HHHHHh-CCCcEEEEecC
Confidence                  22232   444444 56777777654

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=96.57  E-value=0.0044  Score=49.85  Aligned_cols=93  Identities=18%  Similarity=0.176  Sum_probs=60.2

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchh-HHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDA-SQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      ..|+..|.+.|.+|.+||..-.. ..+.....+..++++.++++++|.|++++..++. +.+=  .+.+...+ ++.+|+
T Consensus       341 ~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~~~~f-~~~~--~~~~~~~~-~~~~i~  416 (450)
T 3gg2_A          341 LVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVTEWKEF-RMPD--WSALSQAM-AASLVI  416 (450)
T ss_dssp             HHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEECSCCGGG-SSCC--HHHHHHHS-SSCEEE
T ss_pred             HHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEccCCHHH-hhcC--HHHHHHhc-CCCEEE
Confidence            35788899999999999976532 2222222366778899999999999999988552 2210  02233334 467899


Q ss_pred             eccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           82 DSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        82 d~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |.-+.....        .+.|+.|..
T Consensus       417 D~r~~~~~~--------~~~g~~y~~  434 (450)
T 3gg2_A          417 DGRNVYELP--------ADSDFTLLN  434 (450)
T ss_dssp             ESSCCCCCC------------CEEEE
T ss_pred             ECCCCCChH--------HhCCCEEEE
Confidence            999887543        344777765

>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1

Probab=96.50  E-value=0.0037  Score=47.31  Aligned_cols=98  Identities=13%  Similarity=0.114  Sum_probs=62.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCC-
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPG-   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~-   77 (183)
                      ||..+++.+.+.|++ .+|..+|.+... ...|...+.++.++.+  .+|++++++|+.. ...++   ++..+   .| 
T Consensus        19 ~G~~~~~~l~~~g~~-~v~~VnP~~~g~-~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~-~~~~~---~ea~~---~Gi   89 (288)
T 1oi7_A           19 EGQFHTKQMLTYGTK-IVAGVTPGKGGM-EVLGVPVYDTVKEAVAHHEVDASIIFVPAPA-AADAA---LEAAH---AGI   89 (288)
T ss_dssp             HHHHHHHHHHHHTCE-EEEEECTTCTTC-EETTEEEESSHHHHHHHSCCSEEEECCCHHH-HHHHH---HHHHH---TTC
T ss_pred             HHHHHHHHHHHcCCe-EEEEECCCCCCc-eECCEEeeCCHHHHhhcCCCCEEEEecCHHH-HHHHH---HHHHH---CCC
Confidence            577888998888998 344444443100 0236777888999888  8999999998754 44444   44433   33 


Q ss_pred             cEEEeccCCCc-hhHHHHHHHHHhcCCcEEe
Q psy755           78 VIVIDSSTVDP-QVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        78 ~iiid~s~~~~-~~~~~~~~~~~~~g~~~~~  107 (183)
                      +.++..++..+ .....+.+..++.|+.++.
T Consensus        90 ~~vVi~t~G~~~~~~~~l~~~a~~~gi~vig  120 (288)
T 1oi7_A           90 PLIVLITEGIPTLDMVRAVEEIKALGSRLIG  120 (288)
T ss_dssp             SEEEECCSCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHHcCCEEEe
Confidence            22444454444 3456777777777876663

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=96.49  E-value=0.007  Score=48.87  Aligned_cols=98  Identities=12%  Similarity=0.090  Sum_probs=62.7

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchh--HHHHHH-----------cCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcc
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDA--SQTLAK-----------EGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~--~~~~~~-----------~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      ..|+..|.+.|.+|.+||..-..  ......           .++...++..+.++++|.|++++..++ .+.+=  .+.
T Consensus       352 ~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~~~~-f~~~~--~~~  428 (467)
T 2q3e_A          352 IYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDM-FKELD--YER  428 (467)
T ss_dssp             HHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHHHTTCSEEEECSCCGG-GGGSC--HHH
T ss_pred             HHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHHHhCCcEEEEecCChh-hhcCC--HHH
Confidence            35788999999999999975322  211110           023455688889999999999998854 33220  034


Q ss_pred             ccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           70 ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +...++...+|+|.-+....    ..+.+.+.|+.|..
T Consensus       429 ~~~~~~~~~~i~D~r~~~~~----~~~~~~~~g~~~~~  462 (467)
T 2q3e_A          429 IHKKMLKPAFIFDGRRVLDG----LHNELQTIGFQIET  462 (467)
T ss_dssp             HHHHSCSSCEEEESSCTTTT----CHHHHHHHTCEEEE
T ss_pred             HHHhcCCCCEEEeCCCcCCc----hHHHHHhcCcEEEE
Confidence            44555556669999987643    12234455777655

>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A

Probab=96.47  E-value=0.008  Score=46.53  Aligned_cols=93  Identities=20%  Similarity=0.231  Sum_probs=60.4

Q ss_pred             HHHHHhC-CCcEE-EEcCCchhHHHHHH----cCCcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            6 ARNLLKN-GHDVI-VYDKNTDASQTLAK----EGANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         6 A~~l~~~-g~~V~-~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +..+.+. +++|+ ++|++  +.+++.+    .++..+++.++++++  .|+|++++|...+.+.+       ...+..|
T Consensus        19 ~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~-------~~al~aG   89 (349)
T 3i23_A           19 LPYVMIRETLEVKTIFDLH--VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHYDLA-------KQAILAG   89 (349)
T ss_dssp             HHHHTTCTTEEEEEEECTT--CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHHHHH-------HHHHHTT
T ss_pred             HHHHhhCCCeEEEEEECCC--HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHHHHH-------HHHHHcC
Confidence            3445444 56765 67988  3444433    356678899999875  89999999987765554       2456678


Q ss_pred             cEEEe-cc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           78 VIVID-SS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        78 ~iiid-~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +.|+- -- +........+.+..++.|..+.-
T Consensus        90 k~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v  121 (349)
T 3i23_A           90 KSVIVEKPFCDTLEHAEELFALGQEKGVVVMP  121 (349)
T ss_dssp             CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCcCCHHHHHHHHHHHHHcCCeEEE
Confidence            76653 22 23455667777777777765543

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.45  E-value=0.0079  Score=47.22  Aligned_cols=84  Identities=18%  Similarity=0.292  Sum_probs=58.5

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCC----chhH--------HHHHHc-C-CcccCCHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKN----TDAS--------QTLAKE-G-ANMALSLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~----~~~~--------~~~~~~-g-~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      +|..+|+.|...|. +|++.||+    .++.        +.+... + .....++.++++++|++|-+..++.-.+++  
T Consensus       203 AG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~Sap~l~t~em--  280 (388)
T 1vl6_A          203 AGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIGVSRGNILKPEW--  280 (388)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEECSCSSCSCHHH--
T ss_pred             HHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEEeCCCCccCHHH--
Confidence            47789999999998 89999998    5442        223322 1 123567999999999999987633323333  


Q ss_pred             CCccccccCCCCcEEEeccCCCchhH
Q psy755           66 GSDGILKHAKPGVIVIDSSTVDPQVP   91 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~~~~~~~   91 (183)
                           ...+.++.+|+++|+-.|+..
T Consensus       281 -----Vk~Ma~~pIIfalSNPt~E~~  301 (388)
T 1vl6_A          281 -----IKKMSRKPVIFALANPVPEID  301 (388)
T ss_dssp             -----HTTSCSSCEEEECCSSSCSSC
T ss_pred             -----HHhcCCCCEEEEcCCCCCCCC
Confidence                 344667889999999776544

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=96.43  E-value=0.015  Score=44.36  Aligned_cols=99  Identities=10%  Similarity=0.132  Sum_probs=66.6

Q ss_pred             CcHHHHHHHHhCCCcEE-EEcCCchhHHHHHHc--CCcccCCHHHHh----------ccCCEEEEecCChHHHHHHhcCC
Q psy755            1 MGSHMARNLLKNGHDVI-VYDKNTDASQTLAKE--GANMALSLSTLA----------SGAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~-~~~~~~~~~~~~~~~--g~~~~~~~~~~~----------~~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      ||...+..+.+.+.+++ ++|+++++.. +.+.  +....++.++++          .+.|+|++++|...+.+.+    
T Consensus        15 i~~~h~~~l~~~~~~lvav~d~~~~~~~-~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~----   89 (312)
T 3o9z_A           15 IAPRHLKAIKEVGGVLVASLDPATNVGL-VDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQI----   89 (312)
T ss_dssp             SHHHHHHHHHHTTCEEEEEECSSCCCGG-GGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHH----
T ss_pred             HHHHHHHHHHhCCCEEEEEEcCCHHHHH-HHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHH----
Confidence            45667777888787755 5799988742 2222  455677888877          5799999999997765554    


Q ss_pred             ccccccCCCCcEEEecc--CCCchhHHHHHHHHHhcCCcEEe
Q psy755           68 DGILKHAKPGVIVIDSS--TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s--~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                         ...+..|+.|+--=  .........+.+..++.|..+.-
T Consensus        90 ---~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v  128 (312)
T 3o9z_A           90 ---RMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYT  128 (312)
T ss_dssp             ---HHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEE
T ss_pred             ---HHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence               34566787766221  23455667777777777765543

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.43  E-value=0.0059  Score=44.24  Aligned_cols=56  Identities=14%  Similarity=0.281  Sum_probs=45.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCC-cc-----cCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA-NM-----ALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~-~~-----~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|++.|++|++.+|++++.+.+...++ ..     .+++.+.+.++|+||.+...
T Consensus        33 iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~   94 (236)
T 3e8x_A           33 VARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS   94 (236)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred             HHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence            4899999999999999999999998887776555 21     24556777899999998854

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.38  E-value=0.0094  Score=45.71  Aligned_cols=58  Identities=17%  Similarity=0.205  Sum_probs=40.7

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc---------CCcccCCHHHHhccCCEEEEecCChH
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE---------GANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      +|.+++..|+..+.  +++++|+++++++.....         ......+..+.+++||+||++.+.+.
T Consensus        16 vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~~   84 (318)
T 1ez4_A           16 VGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAPQ   84 (318)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC--
T ss_pred             HHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence            47788888888776  899999998877642211         12222345677899999999997654

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=96.37  E-value=0.017  Score=44.24  Aligned_cols=100  Identities=13%  Similarity=0.199  Sum_probs=66.2

Q ss_pred             CcHHHHHHHHhCCCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHh-----------ccCCEEEEecCChHHHHHHhcCC
Q psy755            1 MGSHMARNLLKNGHDVI-VYDKNTDASQTLAKE-GANMALSLSTLA-----------SGAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~-----------~~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      ||...+..|.+.+.+++ ++|+++++....... +....++.++++           .+.|+|++++|...+.+.+    
T Consensus        15 i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~----   90 (318)
T 3oa2_A           15 IAPRHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHI----   90 (318)
T ss_dssp             SHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHH----
T ss_pred             HHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHH----
Confidence            45667778888887755 579998863222222 455677888876           4699999999997765555    


Q ss_pred             ccccccCCCCcEEEecc--CCCchhHHHHHHHHHhcCCcEEe
Q psy755           68 DGILKHAKPGVIVIDSS--TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s--~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                         ...+..|+.|+--=  +......+.+.+..++.|..+..
T Consensus        91 ---~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v  129 (318)
T 3oa2_A           91 ---AAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYN  129 (318)
T ss_dssp             ---HHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEE
T ss_pred             ---HHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEE
Confidence               34566777765221  33455667777777777765544

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=96.36  E-value=0.013  Score=46.30  Aligned_cols=87  Identities=16%  Similarity=0.149  Sum_probs=60.2

Q ss_pred             CcEE-EEcCCchhHHHHHHc-CCc-ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEecc--CC
Q psy755           14 HDVI-VYDKNTDASQTLAKE-GAN-MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSS--TV   86 (183)
Q Consensus        14 ~~V~-~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s--~~   86 (183)
                      .+|+ ++|+++++++++.+. |+. .+++.+++++  +.|+|++++|...+.+.++       ..+..|+.|+--=  +.
T Consensus        59 ~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~tp~~~H~~~~~-------~al~aGkhVl~EKP~a~  131 (412)
T 4gqa_A           59 PHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITSPNHLHYTMAM-------AAIAAGKHVYCEKPLAV  131 (412)
T ss_dssp             EEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH-------HHHHTTCEEEEESCSCS
T ss_pred             eEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECCCcHHHHHHHH-------HHHHcCCCeEeecCCcC
Confidence            4655 579999998887665 664 5789999886  5899999999977765553       4566787765221  23


Q ss_pred             CchhHHHHHHHHHhcCCcEEe
Q psy755           87 DPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        87 ~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .......+.+..++.|..+.-
T Consensus       132 ~~~ea~~l~~~a~~~g~~~~v  152 (412)
T 4gqa_A          132 NEQQAQEMAQAARRAGVKTMV  152 (412)
T ss_dssp             SHHHHHHHHHHHHHHTCCEEE
T ss_pred             CHHHHHHHHHHHHHhCCeeee
Confidence            445566777777666765443

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.36  E-value=0.0009  Score=48.80  Aligned_cols=57  Identities=9%  Similarity=0.163  Sum_probs=40.8

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHHcCC-------cccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKEGA-------NMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|+.+++.|++.| ++|++.+|++++.+.+...++       ...+++.++++++|+||.+....
T Consensus        35 iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~   99 (236)
T 3qvo_A           35 IARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGE   99 (236)
T ss_dssp             HHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCST
T ss_pred             HHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCC
Confidence            5899999999999 899999999887554322221       11223455678999999887653

>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}

Probab=96.35  E-value=0.0075  Score=46.93  Aligned_cols=94  Identities=17%  Similarity=0.218  Sum_probs=62.5

Q ss_pred             HHHHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhcc--CCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            5 MARNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASG--AEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         5 iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~--adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      .+..|.+. +++|+ ++|++++++.  .+. +...+++.++++++  .|+|++|+|...+.+.+       ...+..|+.
T Consensus        21 ~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~-------~~al~aGkh   91 (362)
T 3fhl_A           21 HAPFISTNPHFELYKIVERSKELSK--ERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYA-------GMALEAGKN   91 (362)
T ss_dssp             THHHHHHCTTEEEEEEECSSCCGGG--TTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHHH-------HHHHHTTCE
T ss_pred             HHHHHhhCCCeEEEEEEcCCHHHHH--HhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH-------HHHHHCCCe
Confidence            34455555 66765 6799988732  222 45667899999876  89999999997765555       245667776


Q ss_pred             EE-ecc-CCCchhHHHHHHHHHhcCCcEEe
Q psy755           80 VI-DSS-TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        80 ii-d~s-~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |+ .-- +........+.+..++.|..+.-
T Consensus        92 Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v  121 (362)
T 3fhl_A           92 VVVEKPFTSTTKQGEELIALAKKKGLMLSV  121 (362)
T ss_dssp             EEEESSCCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             EEEecCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            55 322 34556667777777777765543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.34  E-value=0.013  Score=45.52  Aligned_cols=56  Identities=18%  Similarity=0.226  Sum_probs=41.3

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHH----HHHc-----CCcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQT----LAKE-----GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~----~~~~-----g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|.++|..++..|.  +|+++|+++++++.    +...     .+...++..+.+++||+||++...
T Consensus        20 VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG~   86 (343)
T 3fi9_A           20 IGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGGA   86 (343)
T ss_dssp             HHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC-
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccCC
Confidence            37888888888884  89999999887654    2221     233456778889999999999743

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.33  E-value=0.0063  Score=45.20  Aligned_cols=73  Identities=15%  Similarity=0.203  Sum_probs=49.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|.+|+++||++++++...+.       +.+.  ..++..+  =+.++.+++.++   +++.+.+.+=+
T Consensus        19 IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~-------i~~~--g~~~~~~~~Dvt~~~~v~~~~---~~~~~~~G~iD   86 (254)
T 4fn4_A           19 IGRAIAKKFALNDSIVVAVELLEDRLNQIVQE-------LRGM--GKEVLGVKADVSKKKDVEEFV---RRTFETYSRID   86 (254)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHT--TCCEEEEECCTTSHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH-------HHhc--CCcEEEEEccCCCHHHHHHHH---HHHHHHcCCCC
Confidence            68999999999999999999999987765542       1111  1223322  245666677766   56666555556


Q ss_pred             EEEeccC
Q psy755           79 IVIDSST   85 (183)
Q Consensus        79 iiid~s~   85 (183)
                      ++|+...
T Consensus        87 iLVNNAG   93 (254)
T 4fn4_A           87 VLCNNAG   93 (254)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            7777654

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.30  E-value=0.006  Score=49.03  Aligned_cols=93  Identities=13%  Similarity=0.127  Sum_probs=62.3

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHc--CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKE--GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ..|+..|.+.|.+|.+||..-.  +.....  ++...+++.++++++|.|++++..++. +.+=  .+.+...+ ++.+|
T Consensus       345 ~~i~~~L~~~g~~v~~~DP~~~--~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~~~~f-~~~d--~~~~~~~~-~~~~i  418 (446)
T 4a7p_A          345 LSIIAALQDAGATVKAYDPEGV--EQASKMLTDVEFVENPYAAADGADALVIVTEWDAF-RALD--LTRIKNSL-KSPVL  418 (446)
T ss_dssp             HHHHHHHHHTSCEEEEECSSCH--HHHGGGCSSCCBCSCHHHHHTTBSEEEECSCCTTT-TSCC--HHHHHTTB-SSCBE
T ss_pred             HHHHHHHHHCCCEEEEECCCCC--HhHHHhcCCceEecChhHHhcCCCEEEEeeCCHHh-hcCC--HHHHHHhc-CCCEE
Confidence            4578899999999999997653  222222  566778899999999999999987542 2210  02233334 45689


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +|.-+.....      ...+.|+.|..
T Consensus       419 ~D~r~~~~~~------~~~~~g~~y~~  439 (446)
T 4a7p_A          419 VDLRNIYPPA------ELERAGLQYTG  439 (446)
T ss_dssp             ECSSCCSCHH------HHHHTTCBCCC
T ss_pred             EECCCCCCHH------HHHhcCCEEEE
Confidence            9999887533      23456766644

>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}

Probab=96.27  E-value=0.0047  Score=46.98  Aligned_cols=96  Identities=22%  Similarity=0.245  Sum_probs=61.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH-HHHHHcCCcccCCHHHHhc--c-CCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS-QTLAKEGANMALSLSTLAS--G-AEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~--~-adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||..+.+.+.+.|++ .+|..+|.+. +.  -.|...++++.++.+  . +|++++++|+.... .++   ++..+   .
T Consensus        25 ~G~~~~~~l~~~g~~-~v~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~-~~v---~ea~~---~   94 (297)
T 2yv2_A           25 EGSFHAKAMLEYGTK-VVAGVTPGKGGSE--VHGVPVYDSVKEALAEHPEINTSIVFVPAPFAP-DAV---YEAVD---A   94 (297)
T ss_dssp             HHHHHHHHHHHHTCE-EEEEECTTCTTCE--ETTEEEESSHHHHHHHCTTCCEEEECCCGGGHH-HHH---HHHHH---T
T ss_pred             HHHHHHHHHHhCCCc-EEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCCEEEEecCHHHHH-HHH---HHHHH---C
Confidence            467788888888998 5555555532 11  136777888998876  5 99999999986544 443   44433   3


Q ss_pred             CcE-EEeccCCCc-hhHHHHHHHHHhcCCcEE
Q psy755           77 GVI-VIDSSTVDP-QVPQTLSNLAREKQITFL  106 (183)
Q Consensus        77 ~~i-iid~s~~~~-~~~~~~~~~~~~~g~~~~  106 (183)
                      |.- ++-.++..+ .....+.+..++.|+.++
T Consensus        95 Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~vi  126 (297)
T 2yv2_A           95 GIRLVVVITEGIPVHDTMRFVNYARQKGATII  126 (297)
T ss_dssp             TCSEEEECCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHcCCEEE
Confidence            322 444454444 345677777777787666

>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}

Probab=96.27  E-value=0.0053  Score=40.36  Aligned_cols=91  Identities=16%  Similarity=0.244  Sum_probs=60.7

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |..+.+.|.+.||+|+..+...+.+     .|...+.++.++=. .|++++++|. +.+..++   +++...- ...+++
T Consensus        20 g~~v~~~L~~~g~~V~pVnP~~~~i-----~G~~~y~sl~dlp~-vDlavi~~p~-~~v~~~v---~e~~~~g-~k~v~~   88 (122)
T 3ff4_A           20 AYLAAERLKSHGHEFIPVGRKKGEV-----LGKTIINERPVIEG-VDTVTLYINP-QNQLSEY---NYILSLK-PKRVIF   88 (122)
T ss_dssp             HHHHHHHHHHHTCCEEEESSSCSEE-----TTEECBCSCCCCTT-CCEEEECSCH-HHHGGGH---HHHHHHC-CSEEEE
T ss_pred             HHHHHHHHHHCCCeEEEECCCCCcC-----CCeeccCChHHCCC-CCEEEEEeCH-HHHHHHH---HHHHhcC-CCEEEE
Confidence            5667888999999998888665433     25556667777656 8999999987 5566665   5555432 223444


Q ss_pred             eccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           82 DSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        82 d~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                        +....  .+++.+.+++.|++++.
T Consensus        89 --~~G~~--~~e~~~~a~~~Girvv~  110 (122)
T 3ff4_A           89 --NPGTE--NEELEEILSENGIEPVI  110 (122)
T ss_dssp             --CTTCC--CHHHHHHHHHTTCEEEE
T ss_pred             --CCCCC--hHHHHHHHHHcCCeEEC
Confidence              32222  24677777888998885

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.18  E-value=0.02  Score=40.66  Aligned_cols=55  Identities=15%  Similarity=0.151  Sum_probs=40.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-----ccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-----MALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|++.|++|++.+|++++.+.+. .++.     ..+...+.+.++|+||.+...
T Consensus        12 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~   71 (221)
T 3ew7_A           12 AGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGI   71 (221)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred             hHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence            488999999999999999999998876653 3321     111111667899999999855

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.17  E-value=0.014  Score=47.30  Aligned_cols=96  Identities=18%  Similarity=0.200  Sum_probs=62.8

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhH---HHHHH-c-------CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDAS---QTLAK-E-------GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~---~~~~~-~-------g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ..|...|.+.|.+|.+||..-...   +.... .       .+..+++..+.++++|.|++++..++ .+.+=+  +.+.
T Consensus       358 ~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~~~~-f~~~~~--~~~~  434 (481)
T 2o3j_A          358 IHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAARGAHAIVVLTEWDE-FVELNY--SQIH  434 (481)
T ss_dssp             HHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHTTCSEEEECSCCGG-GTTSCH--HHHH
T ss_pred             HHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHcCCCEEEEcCCcHH-hhccCH--HHHH
Confidence            357888999999999999764321   11211 0       13445678888999999999998854 332200  3444


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..++...+|+|.-+.....      .+.+.|+.|..
T Consensus       435 ~~~~~~~~i~D~r~~~~~~------~~~~~g~~~~~  464 (481)
T 2o3j_A          435 NDMQHPAAIFDGRLILDQK------ALREIGFRTFA  464 (481)
T ss_dssp             HHSCSSCEEEESSSCSCHH------HHHHHTCEEEE
T ss_pred             HhcCCCCEEEECCCCCCHH------HHHhcCcEEEE
Confidence            5565667899999877422      34556877766

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.17  E-value=0.011  Score=48.01  Aligned_cols=91  Identities=19%  Similarity=0.138  Sum_probs=62.5

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCC-CCcEEE
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAK-PGVIVI   81 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~-~~~iii   81 (183)
                      ..|+..|.+.|.+|.+||..-...     .......++.++++++|.|++++..++ .+.+=+  +.+...++ +..+|+
T Consensus       376 ~~i~~~L~~~g~~V~~~DP~~~~~-----~~~~~~~~~~~~~~~ad~vvi~t~~~~-f~~~d~--~~~~~~~~~~~~~i~  447 (478)
T 3g79_A          376 EPYRDLCLKAGASVMVHDPYVVNY-----PGVEISDNLEEVVRNADAIVVLAGHSA-YSSLKA--DWAKKVSAKANPVII  447 (478)
T ss_dssp             HHHHHHHHHHTCEEEEECSSCCCB-----TTBCEESCHHHHHTTCSEEEECSCCHH-HHSCCH--HHHHHHHCCSSCEEE
T ss_pred             HHHHHHHHHCCCEEEEECCCcccc-----cCcceecCHHHHHhcCCEEEEecCCHH-HHhhhH--HHHHHHhccCCCEEE
Confidence            357888999999999999765521     123446788999999999999998854 332210  33444554 378999


Q ss_pred             eccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           82 DSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        82 d~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      |.-+.....      ...+.|+.|..
T Consensus       448 D~rn~~~~~------~~~~~g~~y~~  467 (478)
T 3g79_A          448 DGRNVIEPD------EFIGKGFVYKG  467 (478)
T ss_dssp             ESSSCSCHH------HHHTTTCEEEE
T ss_pred             ECCCCCCHH------HHHhcCCEEEE
Confidence            999877532      33566777766

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.16  E-value=0.018  Score=44.83  Aligned_cols=100  Identities=13%  Similarity=0.147  Sum_probs=64.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhc-cCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS-GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +|..+|+.+.+.|.+|+++|+++++.+.....+.... +..++.. .||+++-|--     ..++.  ++..+.+ +.++
T Consensus       186 VG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~-----~~~I~--~~~~~~l-k~~i  256 (355)
T 1c1d_A          186 VGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAM-----GGVIT--TEVARTL-DCSV  256 (355)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSC-----SCCBC--HHHHHHC-CCSE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHH-----HhhcC--HHHHhhC-CCCE
Confidence            3778899999999999999999876222333465444 5566666 8999986532     22221  2222345 3688


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEeecc
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLDAPV  110 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~~~~  110 (183)
                      |++.++......++ .+.+.++|+.++..-+
T Consensus       257 Vie~AN~p~t~~eA-~~~L~~~gIlv~Pd~~  286 (355)
T 1c1d_A          257 VAGAANNVIADEAA-SDILHARGILYAPDFV  286 (355)
T ss_dssp             ECCSCTTCBCSHHH-HHHHHHTTCEECCHHH
T ss_pred             EEECCCCCCCCHHH-HHHHHhCCEEEECCeE
Confidence            88888765443344 5778888888777443

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.14  E-value=0.015  Score=44.69  Aligned_cols=58  Identities=19%  Similarity=0.192  Sum_probs=41.1

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc---------CCcccCCHHHHhccCCEEEEecCChH
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE---------GANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      +|.+++..|+..+.  +++++|+++++++.....         ......+..+.+++||+||++.+.+.
T Consensus        20 vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~~   88 (326)
T 2zqz_A           20 VGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAPQ   88 (326)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC-
T ss_pred             HHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence            47788888888776  899999998877553221         12222345677899999999997653

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.07  E-value=0.01  Score=45.75  Aligned_cols=80  Identities=15%  Similarity=0.110  Sum_probs=52.1

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHH----Hc----C---CcccCCHHHHhccCCEEEEecCChH---------
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLA----KE----G---ANMALSLSTLASGAEFIISMLPASQ---------   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~----~~----g---~~~~~~~~~~~~~adiVi~~vp~~~---------   58 (183)
                      ||.++|..|+..|+  +|+++|+++++++...    ..    +   +...++.+ .+++||+||++...++         
T Consensus        30 vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~aG~~~kpG~tR~dL  108 (331)
T 4aj2_A           30 VGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIITAGARQQEGESRLNL  108 (331)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEECCSCCCCTTCCGGGG
T ss_pred             HHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEccCCCCCCCccHHHH
Confidence            58899999999888  8999999988765422    11    1   12234444 5899999999974432         


Q ss_pred             ------HHHHHhcCCccccccCCCCcEEEeccC
Q psy755           59 ------DVLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        59 ------~~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                            .++.+.   +.+..+ .++.+++..|+
T Consensus       109 ~~~N~~I~~~i~---~~i~~~-~p~a~vlvvtN  137 (331)
T 4aj2_A          109 VQRNVNIFKFII---PNVVKY-SPQCKLLIVSN  137 (331)
T ss_dssp             HHHHHHHHHHHH---HHHHHH-CTTCEEEECSS
T ss_pred             HHHHHHHHHHHH---HHHHHH-CCCeEEEEecC
Confidence                  122222   444444 56777777775

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=96.06  E-value=0.047  Score=42.45  Aligned_cols=88  Identities=11%  Similarity=0.042  Sum_probs=58.3

Q ss_pred             CCcEE-EEcCCchhHHHHHHc-CCc-ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEecc--C
Q psy755           13 GHDVI-VYDKNTDASQTLAKE-GAN-MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSS--T   85 (183)
Q Consensus        13 g~~V~-~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s--~   85 (183)
                      +.+|+ ++|+++++++.+.+. |+. .+++.+++++  +.|+|++|+|+..+.+.++       ..+..|+.|+--=  +
T Consensus        56 ~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~~~H~~~a~-------~al~aGkhVl~EKPla  128 (393)
T 4fb5_A           56 RPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPNQFHAEMAI-------AALEAGKHVWCEKPMA  128 (393)
T ss_dssp             CCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCGGGHHHHHH-------HHHHTTCEEEECSCSC
T ss_pred             CcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCChHHHHHHHH-------HHHhcCCeEEEccCCc
Confidence            44655 579999998887765 764 5788999886  5799999999987765553       4566787765211  2


Q ss_pred             CCchhHHHHHHHHHhcCCcEEe
Q psy755           86 VDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ......+.+.+..++.|..+.-
T Consensus       129 ~~~~ea~~l~~~a~~~g~~l~v  150 (393)
T 4fb5_A          129 PAYADAERMLATAERSGKVAAL  150 (393)
T ss_dssp             SSHHHHHHHHHHHHHSSSCEEE
T ss_pred             ccHHHHHHhhhhHHhcCCcccc
Confidence            3344566677777776655433

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.04  E-value=0.012  Score=43.57  Aligned_cols=71  Identities=14%  Similarity=0.237  Sum_probs=47.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.||++++.+.+.+.+..           +..+-.=+.++.+++.++   +.+.+.+.+=+++
T Consensus        14 IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~-----------~~~~~~Dv~~~~~v~~~v---~~~~~~~g~iDiL   79 (247)
T 3ged_A           14 IGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN-----------LFYFHGDVADPLTLKKFV---EYAMEKLQRIDVL   79 (247)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTT-----------EEEEECCTTSHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC-----------EEEEEecCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            58999999999999999999999887776654311           111222234556666665   5555555555666


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |+...
T Consensus        80 VNNAG   84 (247)
T 3ged_A           80 VNNAC   84 (247)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            76554

>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*

Probab=96.04  E-value=0.012  Score=44.61  Aligned_cols=41  Identities=20%  Similarity=0.304  Sum_probs=31.9

Q ss_pred             cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCC
Q psy755           37 ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        37 ~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      +.++.+.+++||+||.++..+..    +   +  .+++++|.+|||.+..
T Consensus       213 T~dl~~~~~~ADIvV~A~G~p~~----i---~--~d~vk~GavVIDVGin  253 (303)
T 4b4u_A          213 TQNLPELVKQADIIVGAVGKAEL----I---Q--KDWIKQGAVVVDAGFH  253 (303)
T ss_dssp             CSSHHHHHHTCSEEEECSCSTTC----B---C--GGGSCTTCEEEECCCB
T ss_pred             CCCHHHHhhcCCeEEeccCCCCc----c---c--cccccCCCEEEEecee
Confidence            34778889999999999977542    2   1  3578899999999864

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.03  E-value=0.01  Score=45.31  Aligned_cols=58  Identities=21%  Similarity=0.146  Sum_probs=40.6

Q ss_pred             CcHHHHHHHHhCC--CcEEEEcCCchhHHHHHH-c--------CCcccCCHHHHhccCCEEEEecCChH
Q psy755            1 MGSHMARNLLKNG--HDVIVYDKNTDASQTLAK-E--------GANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~g--~~V~~~~~~~~~~~~~~~-~--------g~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      +|.+++..|+..+  .+++++|+++++++.... .        ......+..+.+++||+||++.+.+.
T Consensus        11 vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~   79 (310)
T 2xxj_A           11 VGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQ   79 (310)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence            4778888888887  489999999887764221 1        11222234667899999999986653

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=95.95  E-value=0.035  Score=44.48  Aligned_cols=75  Identities=23%  Similarity=0.243  Sum_probs=54.0

Q ss_pred             HHHHHHHHhCCCcEEEEcCCch-hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            3 SHMARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      ..|++.|.+.|.+|.+||..-. ...+.....+...+++.++++++|.|++++..++ .       +.+.   -++.+|+
T Consensus       356 ~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t~h~e-f-------~~ld---~~~~vv~  424 (444)
T 3vtf_A          356 VEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIATAWPQ-Y-------EGLD---YRGKVVV  424 (444)
T ss_dssp             HHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECSCCGG-G-------GGSC---CTTCEEE
T ss_pred             HHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEccCCHH-H-------hCCC---cCCCEEE
Confidence            3578899999999999996532 2223333356778899999999999999998754 2       2221   2578999


Q ss_pred             eccCCCc
Q psy755           82 DSSTVDP   88 (183)
Q Consensus        82 d~s~~~~   88 (183)
                      |.-+...
T Consensus       425 D~Rni~~  431 (444)
T 3vtf_A          425 DGRYVKK  431 (444)
T ss_dssp             ESSCCGG
T ss_pred             ECCCCCC
Confidence            9887643

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.92  E-value=0.0065  Score=46.78  Aligned_cols=57  Identities=18%  Similarity=0.180  Sum_probs=42.1

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc---------CCcccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE---------GANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      ||.++|..|+..|+  +++++|+++++++.....         +.....+..+.+++||+||++...+
T Consensus        20 vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~~   87 (326)
T 3vku_A           20 VGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGAP   87 (326)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred             HHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCCC
Confidence            58899999998887  899999999876633211         2233344567789999999998554

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=95.87  E-value=0.01  Score=44.07  Aligned_cols=74  Identities=16%  Similarity=0.169  Sum_probs=47.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|.+|++.+|++++.++..+.       +.+  ...++..+.  +.++.+++.++   +++...+.+=+
T Consensus        21 IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~-------l~~--~g~~~~~~~~Dv~~~~~v~~~~---~~~~~~~G~iD   88 (255)
T 4g81_D           21 LGFAYAEGLAAAGARVILNDIRATLLAESVDT-------LTR--KGYDAHGVAFDVTDELAIEAAF---SKLDAEGIHVD   88 (255)
T ss_dssp             HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHH-------HHH--TTCCEEECCCCTTCHHHHHHHH---HHHHHTTCCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHh--cCCcEEEEEeeCCCHHHHHHHH---HHHHHHCCCCc
Confidence            58999999999999999999999887665432       111  011222222  34556666666   56666555556


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|+....
T Consensus        89 iLVNNAG~   96 (255)
T 4g81_D           89 ILINNAGI   96 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            77766543

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=95.80  E-value=0.039  Score=44.73  Aligned_cols=95  Identities=12%  Similarity=0.117  Sum_probs=62.5

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchh-HHHHHH----------cCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDA-SQTLAK----------EGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~----------~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ..|+..|.+.|.+|.+||..-.. ..+...          ..+...+++.++++++|.|++++..++ .+.+-+  +.+.
T Consensus       351 ~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~~~~-f~~~~~--~~~~  427 (478)
T 2y0c_A          351 RELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKI-FKSPDF--VALG  427 (478)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHHTTTCSEEEECSCCGG-GGSCCH--HHHH
T ss_pred             HHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHHHhCCCEEEEecCChH-hhccCH--HHHH
Confidence            35788899999999999976432 122111          134566788899999999999998854 222100  2233


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+ +..+|+|.-+.....      .+.+.|+.|..
T Consensus       428 ~~~-~~~~i~D~r~~~~~~------~~~~~g~~y~~  456 (478)
T 2y0c_A          428 RLW-KTPVIFDGRNLYEPE------TMSEQGIEYHP  456 (478)
T ss_dssp             TTC-SSCEEEESSCCSCHH------HHHHTTCEEEC
T ss_pred             hhc-CCCEEEECCCCCCHH------HHHhcCCEEEE
Confidence            333 358999999887532      34566777766

>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*

Probab=95.77  E-value=0.011  Score=45.04  Aligned_cols=97  Identities=13%  Similarity=0.165  Sum_probs=63.5

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHH-HHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQ-TLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      |..+++.|.+.|++ .+|+.+|.+.. .  -.|...+.++.|+.+  ..|++++++|+.. ...++   +++.+. .- +
T Consensus        27 G~~~~~~l~~~G~~-~v~~VnP~~~g~~--i~G~~vy~sl~el~~~~~vD~avI~vP~~~-~~~~~---~e~i~~-Gi-~   97 (305)
T 2fp4_A           27 GTFHSQQALEYGTN-LVGGTTPGKGGKT--HLGLPVFNTVKEAKEQTGATASVIYVPPPF-AAAAI---NEAIDA-EV-P   97 (305)
T ss_dssp             HHHHHHHHHHHTCE-EEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCHHH-HHHHH---HHHHHT-TC-S
T ss_pred             HHHHHHHHHHCCCc-EEEEeCCCcCcce--ECCeeeechHHHhhhcCCCCEEEEecCHHH-HHHHH---HHHHHC-CC-C
Confidence            67788899999999 45666665321 1  136777788999887  8999999998854 44444   444332 11 3


Q ss_pred             EEEeccCCCc-hhHHHHHHHHHhc-CCcEEe
Q psy755           79 IVIDSSTVDP-QVPQTLSNLAREK-QITFLD  107 (183)
Q Consensus        79 iiid~s~~~~-~~~~~~~~~~~~~-g~~~~~  107 (183)
                      .++..+...+ .+...+.+..++. |+.++.
T Consensus        98 ~iv~~t~G~~~~~~~~l~~~a~~~~gi~liG  128 (305)
T 2fp4_A           98 LVVCITEGIPQQDMVRVKHRLLRQGKTRLIG  128 (305)
T ss_dssp             EEEECCCCCCHHHHHHHHHHHTTCSSCEEEC
T ss_pred             EEEEECCCCChHHHHHHHHHHHhcCCcEEEe
Confidence            4445555544 3445677777777 877664

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=95.68  E-value=0.044  Score=39.05  Aligned_cols=56  Identities=11%  Similarity=0.182  Sum_probs=41.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-----ccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-----MALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-----~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|++.|++|++.+|++++.+.+...++.     ..+...+.+.++|+||.+...
T Consensus        12 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~   72 (224)
T 3h2s_A           12 AGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV   72 (224)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence            48999999999999999999999887765443332     111111667899999998854

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=95.68  E-value=0.064  Score=40.97  Aligned_cols=57  Identities=12%  Similarity=0.171  Sum_probs=38.7

Q ss_pred             CcHHHHHHHHhCC--CcEEEEcCCchhHH--HHHHc--C--Ccc---cCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNG--HDVIVYDKNTDASQ--TLAKE--G--ANM---ALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g--~~V~~~~~~~~~~~--~~~~~--g--~~~---~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|.+++..|+..|  .+|+++|+++....  .+...  .  +..   +++.++++++||+||++...+
T Consensus        12 VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~   79 (314)
T 1mld_A           12 IGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP   79 (314)
T ss_dssp             THHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred             HHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcC
Confidence            5788999999888  68999999882211  11111  1  111   135777899999999998543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=95.67  E-value=0.045  Score=39.45  Aligned_cols=70  Identities=13%  Similarity=0.193  Sum_probs=45.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.-          -.....+..=+.+...++.++   +++....   .++
T Consensus        13 IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~---~~~~~~~---d~l   76 (230)
T 3guy_A           13 LGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----------SNNVGYRARDLASHQEVEQLF---EQLDSIP---STV   76 (230)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----------SSCCCEEECCTTCHHHHHHHH---HSCSSCC---SEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----------hhccCeEeecCCCHHHHHHHH---HHHhhcC---CEE
Confidence            589999999999999999999999887765531          012333333444555565555   3333222   666


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      +++...
T Consensus        77 v~~Ag~   82 (230)
T 3guy_A           77 VHSAGS   82 (230)
T ss_dssp             EECCCC
T ss_pred             EEeCCc
Confidence            766653

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=95.66  E-value=0.0084  Score=42.98  Aligned_cols=56  Identities=11%  Similarity=0.132  Sum_probs=42.0

Q ss_pred             CcHHHHHHHH-hCCCcEEEEcCCch-hHHHHHHc--CC-------cccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLL-KNGHDVIVYDKNTD-ASQTLAKE--GA-------NMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~-~~g~~V~~~~~~~~-~~~~~~~~--g~-------~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|+ +.|++|++.+|+++ +.+.+.+.  ++       ...+++.++++++|+||.+...
T Consensus        17 iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~   83 (221)
T 3r6d_A           17 IAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME   83 (221)
T ss_dssp             HHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred             HHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence            5899999999 89999999999998 77666422  21       1112345667899999999865

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=95.64  E-value=0.033  Score=40.83  Aligned_cols=76  Identities=16%  Similarity=0.191  Sum_probs=47.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh-ccCCEEEEec--CChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA-SGAEFIISML--PASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~adiVi~~v--p~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.       +.+.- ..+..+..-+  .+...++.++   +.+.....+=
T Consensus        24 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~~~~~g~i   93 (252)
T 3f1l_A           24 IGREAAMTYARYGATVILLGRNEEKLRQVASH-------INEETGRQPQWFILDLLTCTSENCQQLA---QRIAVNYPRL   93 (252)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHHHSCCCEEEECCTTTCCHHHHHHHH---HHHHHHCSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhhcCCCceEEEEecccCCHHHHHHHH---HHHHHhCCCC
Confidence            58999999999999999999999887665432       11111 1233333333  4455566655   5555555455


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++|++...
T Consensus        94 d~lv~nAg~  102 (252)
T 3f1l_A           94 DGVLHNAGL  102 (252)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            677776654

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=95.61  E-value=0.054  Score=41.59  Aligned_cols=57  Identities=16%  Similarity=0.195  Sum_probs=39.3

Q ss_pred             CcHHHHHHHHhCC--CcEEEEcCCchhH--HHHHHcCC----cc---cCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNG--HDVIVYDKNTDAS--QTLAKEGA----NM---ALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g--~~V~~~~~~~~~~--~~~~~~g~----~~---~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|.+++..|+..|  ++|+++|++++..  ..+.....    ..   .++..++++++|+||++.+.+
T Consensus        20 VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~   87 (326)
T 1smk_A           20 IGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP   87 (326)
T ss_dssp             THHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence            5889999999988  7999999887621  12222111    11   225567889999999998643

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=95.58  E-value=0.029  Score=41.89  Aligned_cols=76  Identities=20%  Similarity=0.208  Sum_probs=46.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.       +.+.-.....+-.=+.+...++.++   +++...+.+=.++
T Consensus        44 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~d~~~v~~~~---~~~~~~~g~iD~l  113 (276)
T 3r1i_A           44 IGKKVALAYAEAGAQVAVAARHSDALQVVADE-------IAGVGGKALPIRCDVTQPDQVRGML---DQMTGELGGIDIA  113 (276)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-------HHHTTCCCEEEECCTTCHHHHHHHH---HHHHHHHSCCSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhcCCeEEEEEcCCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            58999999999999999999999887765432       1110011222222334555555655   4444444444566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus       114 vnnAg~  119 (276)
T 3r1i_A          114 VCNAGI  119 (276)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            666544

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=95.55  E-value=0.034  Score=41.02  Aligned_cols=74  Identities=15%  Similarity=0.124  Sum_probs=46.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.++|+.|++.|++|++.+|+++..+++.+.-       ++ ..  ++..+-+=+.++.+++..+   +.+...+.+=+
T Consensus        20 IG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~-------~~-~~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~G~iD   88 (256)
T 4fs3_A           20 IAFGVAKVLDQLGAKLVFTYRKERSRKELEKLL-------EQ-LNQPEAHLYQIDVQSDEEVINGF---EQIGKDVGNID   88 (256)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH-------GG-GTCSSCEEEECCTTCHHHHHHHH---HHHHHHHCCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-------Hh-cCCCcEEEEEccCCCHHHHHHHH---HHHHHHhCCCC
Confidence            589999999999999999999988776654320       01 11  1222222245566666665   55555554545


Q ss_pred             EEEeccC
Q psy755           79 IVIDSST   85 (183)
Q Consensus        79 iiid~s~   85 (183)
                      ++++...
T Consensus        89 ~lvnnAg   95 (256)
T 4fs3_A           89 GVYHSIA   95 (256)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            6666544

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.52  E-value=0.027  Score=41.59  Aligned_cols=74  Identities=18%  Similarity=0.305  Sum_probs=47.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.       +.+  ...++.++  =+.+...++.++   +++...+.+=.
T Consensus        23 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id   90 (264)
T 3ucx_A           23 LGTTLARRCAEQGADLVLAARTVERLEDVAKQ-------VTD--TGRRALSVGTDITDDAQVAHLV---DETMKAYGRVD   90 (264)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHHHHHHH---HHHHHHTSCCS
T ss_pred             HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH-------HHh--cCCcEEEEEcCCCCHHHHHHHH---HHHHHHcCCCc
Confidence            58999999999999999999999887665432       111  12233333  344555566655   55555555556


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        91 ~lv~nAg~   98 (264)
T 3ucx_A           91 VVINNAFR   98 (264)
T ss_dssp             EEEECCCS
T ss_pred             EEEECCCC
Confidence            77776643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=95.51  E-value=0.032  Score=41.46  Aligned_cols=76  Identities=12%  Similarity=0.145  Sum_probs=46.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.       +.+.-.....+..=+.+...++.++   +++...+.+=.++
T Consensus        40 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD~l  109 (270)
T 3ftp_A           40 IGRAIALELARRGAMVIGTATTEAGAEGIGAA-------FKQAGLEGRGAVLNVNDATAVDALV---ESTLKEFGALNVL  109 (270)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-------HHHHTCCCEEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhcCCcEEEEEEeCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            58999999999999999999999877665432       1111112233333344555666655   4454444444666


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus       110 vnnAg~  115 (270)
T 3ftp_A          110 VNNAGI  115 (270)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            766553

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=95.43  E-value=0.023  Score=42.17  Aligned_cols=74  Identities=14%  Similarity=0.214  Sum_probs=45.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.       +.+.  ..++.++  =+.+...++.++   +.+...+.+=.
T Consensus        16 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------l~~~--~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD   83 (264)
T 3tfo_A           16 IGEGIARELGVAGAKILLGARRQARIEAIATE-------IRDA--GGTALAQVLDVTDRHSVAAFA---QAAVDTWGRID   83 (264)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-------HHHT--TCEEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhc--CCcEEEEEcCCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999999887665432       1111  1223332  234455555554   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        84 ~lVnnAG~   91 (264)
T 3tfo_A           84 VLVNNAGV   91 (264)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            66766544

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.39  E-value=0.028  Score=42.14  Aligned_cols=82  Identities=12%  Similarity=0.207  Sum_probs=53.5

Q ss_pred             CcHHHHHHHHhC-CCcEEE-EcCCchhH-----HHHH--HcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKN-GHDVIV-YDKNTDAS-----QTLA--KEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~-~~~~~~~~-----~~~~--~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||+.+++.+.+. +++++. +|+++...     ..+.  ..++...++++++++++|+||-++++.. ....+      .
T Consensus        19 MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p~a-~~~~~------~   91 (272)
T 4f3y_A           19 MGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPEG-TLVHL------D   91 (272)
T ss_dssp             HHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCHHH-HHHHH------H
T ss_pred             HHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCHHH-HHHHH------H
Confidence            789999888765 567775 68875421     1111  1156667899999999999999996543 33332      3


Q ss_pred             ccCCCCcEEEeccCCCch
Q psy755           72 KHAKPGVIVIDSSTVDPQ   89 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~   89 (183)
                      ..+..|..+|-.|+....
T Consensus        92 ~al~~G~~vVigTTG~s~  109 (272)
T 4f3y_A           92 AALRHDVKLVIGTTGFSE  109 (272)
T ss_dssp             HHHHHTCEEEECCCCCCH
T ss_pred             HHHHcCCCEEEECCCCCH
Confidence            445677777766665433

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.38  E-value=0.026  Score=43.37  Aligned_cols=56  Identities=18%  Similarity=0.257  Sum_probs=41.7

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc----cCC---HHHH-hccCCEEEEecCChHH
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM----ALS---LSTL-ASGAEFIISMLPASQD   59 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~-~~~adiVi~~vp~~~~   59 (183)
                      |..+++.|.+.|+ |++.|+++++++ +.+.+...    ..+   +.++ ++++|.|++++++++.
T Consensus       127 g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~  190 (336)
T 1lnq_A          127 TLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE  190 (336)
T ss_dssp             HHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH
T ss_pred             HHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH
Confidence            6788888999999 999999999998 77665421    112   2233 5689999999987643

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=95.35  E-value=0.023  Score=42.60  Aligned_cols=72  Identities=17%  Similarity=0.200  Sum_probs=47.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+++|+.|++.|.+|++.+|++++++...++ +.           .+-.+-.=+.+..+++.++   +++.+.+.+=++
T Consensus        41 IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~-----------~~~~~~~Dv~~~~~v~~~~---~~~~~~~G~iDi  106 (273)
T 4fgs_A           41 IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG-----------GAVGIQADSANLAELDRLY---EKVKAEAGRIDV  106 (273)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCT-----------TCEEEECCTTCHHHHHHHH---HHHHHHHSCEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-----------CeEEEEecCCCHHHHHHHH---HHHHHHcCCCCE
Confidence            58999999999999999999999988776543 21           1222222244556666665   555555544456


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      +|+....
T Consensus       107 LVNNAG~  113 (273)
T 4fgs_A          107 LFVNAGG  113 (273)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            6665543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.34  E-value=0.054  Score=43.46  Aligned_cols=103  Identities=19%  Similarity=0.157  Sum_probs=61.0

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch----hHHHHHHcCCccc--CCHHHHhcc-CCEEEEec--CChHH-HHHHh------c
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD----ASQTLAKEGANMA--LSLSTLASG-AEFIISML--PASQD-VLDAY------D   65 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~----~~~~~~~~g~~~~--~~~~~~~~~-adiVi~~v--p~~~~-~~~v~------~   65 (183)
                      |.+.|+.|.+.|++|+++|+++.    ..+.+.+.|+...  ....+...+ +|+||++.  |...+ +....      .
T Consensus        21 G~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~~p~~~~a~~~gi~v~  100 (451)
T 3lk7_A           21 GEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVL  100 (451)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTTSHHHHHHHHTTCCEE
T ss_pred             HHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCCChhHHHHHHCCCcEE
Confidence            77889999999999999998542    3456666777542  233445566 89999863  33222 22211      0


Q ss_pred             CCccccccCCCCcEE-EeccCCCchhHHHHHHHHHhcCCc
Q psy755           66 GSDGILKHAKPGVIV-IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        66 ~~~~l~~~l~~~~ii-id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      +.-++...+.+..+| |-.|+.+..+..-+...+...|..
T Consensus       101 ~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~  140 (451)
T 3lk7_A          101 TEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQR  140 (451)
T ss_dssp             CHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTTCC
T ss_pred             eHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcCCC
Confidence            000122222334433 444556677777777788877754

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=95.32  E-value=0.038  Score=40.20  Aligned_cols=74  Identities=11%  Similarity=0.174  Sum_probs=46.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEE--EecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFII--SMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi--~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.       +.+.  ..++.+  .=+.+...++.++   +++.....+=.
T Consensus        17 IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~-------~~~~--~~~~~~~~~D~~~~~~~~~~~---~~~~~~~~~id   84 (247)
T 3lyl_A           17 IGFEVAHALASKGATVVGTATSQASAEKFENS-------MKEK--GFKARGLVLNISDIESIQNFF---AEIKAENLAID   84 (247)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-------HHHT--TCCEEEEECCTTCHHHHHHHH---HHHHHTTCCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhc--CCceEEEEecCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999999877665432       1110  122322  2334555566655   55554444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        85 ~li~~Ag~   92 (247)
T 3lyl_A           85 ILVNNAGI   92 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            77776654

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=95.31  E-value=0.045  Score=41.32  Aligned_cols=82  Identities=13%  Similarity=0.093  Sum_probs=53.6

Q ss_pred             CcHHHHHHHHhC-CCcEEE-EcCCchh-----HHHHH---HcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLKN-GHDVIV-YDKNTDA-----SQTLA---KEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~-~~~~~~~-----~~~~~---~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      ||+.+++.+.+. +++++. +|+++..     +..+.   ..|+..++++++++..+|+||-.+++.. ....      +
T Consensus        33 MGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~p~a-~~~~------~  105 (288)
T 3ijp_A           33 MGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQPQA-SVLY------A  105 (288)
T ss_dssp             HHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSCHHH-HHHH------H
T ss_pred             HHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCCHHH-HHHH------H
Confidence            788899887754 667664 5887532     11111   2366778899999999999998886533 3222      2


Q ss_pred             cccCCCCcEEEeccCCCch
Q psy755           71 LKHAKPGVIVIDSSTVDPQ   89 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~   89 (183)
                      ...+..|..+|-.|+....
T Consensus       106 ~~~l~~Gv~vViGTTG~~~  124 (288)
T 3ijp_A          106 NYAAQKSLIHIIGTTGFSK  124 (288)
T ss_dssp             HHHHHHTCEEEECCCCCCH
T ss_pred             HHHHHcCCCEEEECCCCCH
Confidence            3456678777776666543

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=95.27  E-value=0.02  Score=42.16  Aligned_cols=73  Identities=16%  Similarity=0.219  Sum_probs=45.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.++|+.|++.|++|++.+|++++.+.+.+.-..         ...++.++  =+.+...++.++   +.+...+.+=+
T Consensus        18 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id   85 (257)
T 3imf_A           18 MGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ---------FPGQILTVQMDVRNTDDIQKMI---EQIDEKFGRID   85 (257)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---------STTCEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---------cCCcEEEEEccCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999999887766542100         01122222  334555566655   45544444446


Q ss_pred             EEEeccC
Q psy755           79 IVIDSST   85 (183)
Q Consensus        79 iiid~s~   85 (183)
                      ++|++..
T Consensus        86 ~lv~nAg   92 (257)
T 3imf_A           86 ILINNAA   92 (257)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            6776655

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=95.26  E-value=0.026  Score=41.27  Aligned_cols=74  Identities=20%  Similarity=0.303  Sum_probs=45.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.       +.+  ...++.++  =+.+...++.++   +.+...+.+=.
T Consensus        21 iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~---~~~~~~~g~id   88 (253)
T 3qiv_A           21 IGQAYAEALAREGAAVVVADINAEAAEAVAKQ-------IVA--DGGTAISVAVDVSDPESAKAMA---DRTLAEFGGID   88 (253)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHH--TTCEEEEEECCTTSHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-------HHh--cCCcEEEEEccCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999999887665432       111  01222222  233445555554   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        89 ~li~~Ag~   96 (253)
T 3qiv_A           89 YLVNNAAI   96 (253)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            66666554

>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}

Probab=95.25  E-value=0.038  Score=42.47  Aligned_cols=87  Identities=5%  Similarity=-0.032  Sum_probs=56.4

Q ss_pred             hCCCcEE-EEcCCc-hhHHHHHHc----CC--cccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755           11 KNGHDVI-VYDKNT-DASQTLAKE----GA--NMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus        11 ~~g~~V~-~~~~~~-~~~~~~~~~----g~--~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ..+.+|+ ++|+++ ++.+++.+.    ++  ..+++.+++++  +.|+|++++|...+.+.+       ...+..|+.|
T Consensus        22 ~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~-------~~al~aGkhV   94 (337)
T 3ip3_A           22 DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLNGKIL-------LEALERKIHA   94 (337)
T ss_dssp             CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHHHHHH-------HHHHHTTCEE
T ss_pred             CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchHHHHH-------HHHHHCCCcE
Confidence            3466766 579987 455554432    43  56789999886  489999999987665444       3456678776


Q ss_pred             Eecc--CCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSS--TVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s--~~~~~~~~~~~~~~~~~g~~  104 (183)
                      +--=  .........+.+..++.|..
T Consensus        95 l~EKPla~~~~ea~~l~~~a~~~g~~  120 (337)
T 3ip3_A           95 FVEKPIATTFEDLEKIRSVYQKVRNE  120 (337)
T ss_dssp             EECSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred             EEeCCCCCCHHHHHHHHHHHHHhCCc
Confidence            5211  22344666777777777765

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=95.25  E-value=0.038  Score=40.59  Aligned_cols=73  Identities=21%  Similarity=0.320  Sum_probs=45.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.-          -.....+..=+.+...++.++   +.+...+.+=.++
T Consensus        21 IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~---~~~~~~~g~id~l   87 (261)
T 3n74_A           21 FGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----------GDAALAVAADISKEADVDAAV---EAALSKFGKVDIL   87 (261)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CTTEEEEECCTTSHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------CCceEEEEecCCCHHHHHHHH---HHHHHhcCCCCEE
Confidence            589999999999999999999998877765420          001122222234445555554   4444444444566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            666553

>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A

Probab=95.23  E-value=0.19  Score=34.19  Aligned_cols=117  Identities=15%  Similarity=0.080  Sum_probs=69.1

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch-hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHH---HHHHhcCCccccccCCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMALSLSTLASGAEFIISMLPASQD---VLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~---~~~v~~~~~~l~~~l~~~   77 (183)
                      ...|+..|.+.|.+|.++|.+.. ..+.           +.+.+.++|.||+.+|.-..   ....+   +.+.....++
T Consensus        22 A~~ia~~l~~~g~~v~~~~~~~~~~~~~-----------~~~~~~~~d~ii~Gspty~g~~p~~~~l---~~l~~~~~~~   87 (159)
T 3fni_A           22 AQAIINGITKTGVGVDVVDLGAAVDLQE-----------LRELVGRCTGLVIGMSPAASAASIQGAL---STILGSVNEK   87 (159)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSSCCCHHH-----------HHHHHHTEEEEEEECCBTTSHHHHHHHH---HHHHHHCCTT
T ss_pred             HHHHHHHHHHCCCeEEEEECcCcCCHHH-----------HHHHHHhCCEEEEEcCcCCCCccHHHHH---HHHHhhcccC
Confidence            45677777777888888876653 2221           22235679999999986321   12333   4444433467


Q ss_pred             cEEEeccCC--CchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhc
Q psy755           78 VIVIDSSTV--DPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus        78 ~iiid~s~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g  144 (183)
                      +.+.-.++.  .......+.+.+...|+..+..++..      .+      ..+++..++++++.+.+.
T Consensus        88 k~va~fgs~g~~~~a~~~l~~~l~~~G~~~v~~~~~~------~~------~P~~~dl~~~~~~g~~la  144 (159)
T 3fni_A           88 QAVGIFETGGGDDEPIDPLLSKFRNLGLTTAFPAIRI------KQ------TPTENTYKLCEEAGTDLG  144 (159)
T ss_dssp             SEEEEECCSSSCBCCHHHHHHHHHHTTCEESSSCBCC------SS------CCCHHHHHHHHHHHHHHH
T ss_pred             CEEEEEEcCCCCcHHHHHHHHHHHHCCCEEecCceEE------Ee------CCCHHHHHHHHHHHHHHH
Confidence            766544443  23356788888888898877644321      01      125666677776666554

>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}

Probab=95.21  E-value=0.048  Score=41.85  Aligned_cols=91  Identities=14%  Similarity=0.181  Sum_probs=61.2

Q ss_pred             HHHHHHHhC-CCcEE-EEcCCchhHHHHHHcCCcccCCHHHHhcc---CCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            4 HMARNLLKN-GHDVI-VYDKNTDASQTLAKEGANMALSLSTLASG---AEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         4 ~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ..+..|.+. +.+|+ ++|+++++      .|+...++.++++++   .|+|++++|.....+.+       ...+..|+
T Consensus        40 ~~~~~l~~~~~~~lvav~d~~~~~------~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~-------~~al~aGk  106 (330)
T 4ew6_A           40 QHLPSIAKNANFKLVATASRHGTV------EGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAA-------YKALVAGK  106 (330)
T ss_dssp             THHHHHHHCTTEEEEEEECSSCCC------TTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHH-------HHHHHTTC
T ss_pred             HHHHHHHhCCCeEEEEEEeCChhh------cCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHH-------HHHHHcCC
Confidence            455666665 56765 57998764      367778899998765   89999999976654444       34566788


Q ss_pred             EEEecc--CCCchhHHHHHHHHHhcCCcEEe
Q psy755           79 IVIDSS--TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        79 iiid~s--~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .|+---  .........+.+..++.|..+.-
T Consensus       107 hVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v  137 (330)
T 4ew6_A          107 HVFLEKPPGATLSEVADLEALANKQGASLFA  137 (330)
T ss_dssp             EEEECSSSCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred             cEEEeCCCCCCHHHHHHHHHHHHhcCCeEEE
Confidence            776221  23445666777777777776544

>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1

Probab=95.20  E-value=0.048  Score=42.03  Aligned_cols=75  Identities=24%  Similarity=0.306  Sum_probs=50.4

Q ss_pred             CcHHHHHHHHhCC-CcEE-EEcCCchhHHHHHHc-CC------------------cccCCHHHHhccCCEEEEecCChHH
Q psy755            1 MGSHMARNLLKNG-HDVI-VYDKNTDASQTLAKE-GA------------------NMALSLSTLASGAEFIISMLPASQD   59 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~-~~~~~~~~~~~~~~~-g~------------------~~~~~~~~~~~~adiVi~~vp~~~~   59 (183)
                      ||+.+++.|.+.. .+++ +.|+++++...+.+. |.                  ....+.++++.+.|+|++|+|...+
T Consensus        13 iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDvV~~aTp~~~h   92 (334)
T 2czc_A           13 IGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDIIVDATPGGIG   92 (334)
T ss_dssp             HHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEEEECCSTTHH
T ss_pred             HHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCEEEECCCcccc
Confidence            5788888887763 4655 468887776655532 31                  3345778888899999999998765


Q ss_pred             HHHHhcCCccccccCCCCcEEEe
Q psy755           60 VLDAYDGSDGILKHAKPGVIVID   82 (183)
Q Consensus        60 ~~~v~~~~~~l~~~l~~~~iiid   82 (183)
                      .+..       ..++..|+.|+.
T Consensus        93 ~~~a-------~~~l~aGk~Vi~  108 (334)
T 2czc_A           93 AKNK-------PLYEKAGVKAIF  108 (334)
T ss_dssp             HHHH-------HHHHHHTCEEEE
T ss_pred             HHHH-------HHHHHcCCceEe
Confidence            4443       234556777664

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=95.19  E-value=0.029  Score=41.91  Aligned_cols=74  Identities=19%  Similarity=0.232  Sum_probs=45.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++.+...+.       +.+  ...++.++  =+.+...++.++   +.+...+.+=.
T Consensus        36 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~id  103 (279)
T 3sju_A           36 IGLAVARTLAARGIAVYGCARDAKNVSAAVDG-------LRA--AGHDVDGSSCDVTSTDEVHAAV---AAAVERFGPIG  103 (279)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHT--TTCCEEEEECCTTCHHHHHHHH---HHHHHHHCSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHh--cCCcEEEEECCCCCHHHHHHHH---HHHHHHcCCCc
Confidence            58999999999999999999999877665432       000  01233333  334555555555   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus       104 ~lv~nAg~  111 (279)
T 3sju_A          104 ILVNSAGR  111 (279)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            67766554

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.11  E-value=0.017  Score=46.67  Aligned_cols=58  Identities=21%  Similarity=0.399  Sum_probs=43.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcc-------cCCHHHH-hccCCEEEEecCChH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANM-------ALSLSTL-ASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~-------~~~~~~~-~~~adiVi~~vp~~~   58 (183)
                      +|..+|+.|.+.||+|++.|.++++++++... ++..       .+.+.++ +++||+++.++++.+
T Consensus        14 vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De   80 (461)
T 4g65_A           14 VGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE   80 (461)
T ss_dssp             HHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred             HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence            38899999999999999999999999988754 4211       1123333 578999998887643

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=95.09  E-value=0.028  Score=41.37  Aligned_cols=74  Identities=16%  Similarity=0.250  Sum_probs=45.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.       +.+  ...++.++  =+.+...++.++   +.+...+.+=+
T Consensus        24 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~id   91 (256)
T 3gaf_A           24 IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAA-------IRQ--AGGKAIGLECNVTDEQHREAVI---KAALDQFGKIT   91 (256)
T ss_dssp             HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHh--cCCcEEEEECCCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999999877665432       111  11233333  234455555555   44444444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        92 ~lv~nAg~   99 (256)
T 3gaf_A           92 VLVNNAGG   99 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            66766543

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=95.06  E-value=0.065  Score=39.85  Aligned_cols=75  Identities=16%  Similarity=0.154  Sum_probs=46.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.-       .+. .....+..=+.+...++.++   +++...+.+=.++
T Consensus        33 IG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~-------~~~-~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD~l  101 (272)
T 2nwq_A           33 FGEACARRFAEAGWSLVLTGRREERLQALAGEL-------SAK-TRVLPLTLDVRDRAAMSAAV---DNLPEEFATLRGL  101 (272)
T ss_dssp             SHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------TTT-SCEEEEECCTTCHHHHHHHH---HTCCGGGSSCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------hcC-CcEEEEEcCCCCHHHHHHHH---HHHHHHhCCCCEE
Confidence            699999999999999999999988776654320       000 11222223344556666665   4554444444667


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus       102 vnnAG~  107 (272)
T 2nwq_A          102 INNAGL  107 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            776654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=95.03  E-value=0.09  Score=38.44  Aligned_cols=72  Identities=15%  Similarity=0.247  Sum_probs=45.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+. +           .+...+..=+.+...++.++   +.+...+.+=++
T Consensus        12 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iD~   77 (248)
T 3asu_A           12 FGECITRRFIQQGHKVIATGRRQERLQELKDELG-----------DNLYIAQLDVRNRAAIEEML---ASLPAEWCNIDI   77 (248)
T ss_dssp             THHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----------TTEEEEECCTTCHHHHHHHH---HTSCTTTCCCCE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----------CceEEEEcCCCCHHHHHHHH---HHHHHhCCCCCE
Confidence            69999999999999999999998876655432 1           01122222234455566655   444444444466


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      +|++...
T Consensus        78 lvnnAg~   84 (248)
T 3asu_A           78 LVNNAGL   84 (248)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            7776653

>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1

Probab=95.03  E-value=0.045  Score=42.28  Aligned_cols=80  Identities=16%  Similarity=0.233  Sum_probs=50.9

Q ss_pred             CcHHHHHHHHhC-CCcEEE-EcCCchhHHHHHHc-------------------CCcccCCHHHHhccCCEEEEecCChHH
Q psy755            1 MGSHMARNLLKN-GHDVIV-YDKNTDASQTLAKE-------------------GANMALSLSTLASGAEFIISMLPASQD   59 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~-~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~adiVi~~vp~~~~   59 (183)
                      ||+.+++.|.++ +++++. .|+++....+....                   +.....+..+...++|+||.|+|....
T Consensus        12 iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDvV~~atp~~~~   91 (337)
T 1cf2_P           12 VGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIVIDCTPEGIG   91 (337)
T ss_dssp             THHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEEEECCSTTHH
T ss_pred             HHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCEEEECCCchhh
Confidence            688999988874 456654 57776654433321                   222223556666789999999998654


Q ss_pred             HHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           60 VLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        60 ~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .+..    +   .++..|+.|||.+...
T Consensus        92 ~~~a----~---~~l~aG~~VId~sp~~  112 (337)
T 1cf2_P           92 AKNL----K---MYKEKGIKAIFQGGEK  112 (337)
T ss_dssp             HHHH----H---HHHHHTCCEEECTTSC
T ss_pred             HHHH----H---HHHHcCCEEEEecCCC
Confidence            4333    2   3445677788887763

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=95.02  E-value=0.034  Score=40.98  Aligned_cols=76  Identities=18%  Similarity=0.286  Sum_probs=45.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.       +.+.-....++.+=+.+...++.++   +.+.....+=.++
T Consensus        41 IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~id~l  110 (262)
T 3rkr_A           41 IGAAIARKLGSLGARVVLTARDVEKLRAVERE-------IVAAGGEAESHACDLSHSDAIAAFA---TGVLAAHGRCDVL  110 (262)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHTTCEEEEEECCTTCHHHHHHHH---HHHHHHHSCCSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHHhCCceeEEEecCCCHHHHHHHH---HHHHHhcCCCCEE
Confidence            58999999999999999999999887665432       1110011222222334445555554   4444444444667


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus       111 v~~Ag~  116 (262)
T 3rkr_A          111 VNNAGV  116 (262)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            776654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=95.02  E-value=0.06  Score=40.21  Aligned_cols=76  Identities=12%  Similarity=0.215  Sum_probs=46.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccC-CEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGA-EFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a-diVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +|.++|+.|++.|++|++.+|++++.+...+.       +.+.-... ..+-.=+.+...++.++   +++...+.+=++
T Consensus        45 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD~  114 (281)
T 4dry_A           45 VGRGIAQALSAEGYSVVITGRRPDVLDAAAGE-------IGGRTGNIVRAVVCDVGDPDQVAALF---AAVRAEFARLDL  114 (281)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHHHSSCEEEEECCTTCHHHHHHHH---HHHHHHHSCCSE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhcCCCeEEEEEcCCCCHHHHHHHH---HHHHHHcCCCCE
Confidence            58999999999999999999999877665432       11111111 22222234555566655   555444445567


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      +|++...
T Consensus       115 lvnnAG~  121 (281)
T 4dry_A          115 LVNNAGS  121 (281)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            7776654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=95.00  E-value=0.037  Score=40.64  Aligned_cols=73  Identities=16%  Similarity=0.267  Sum_probs=45.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.       +.+.  ..++.++.  +.+...++.++   +.+... .+=.
T Consensus        19 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~--~~~~~~~~~Dv~~~~~v~~~~---~~~~~~-g~id   85 (252)
T 3h7a_A           19 IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAE-------IEAA--GGRIVARSLDARNEDEVTAFL---NAADAH-APLE   85 (252)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-------HHHT--TCEEEEEECCTTCHHHHHHHH---HHHHHH-SCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhc--CCeEEEEECcCCCHHHHHHHH---HHHHhh-CCce
Confidence            58999999999999999999999887765432       1110  12333332  34455555555   444443 3335


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        86 ~lv~nAg~   93 (252)
T 3h7a_A           86 VTIFNVGA   93 (252)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            66666654

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=94.99  E-value=0.038  Score=42.94  Aligned_cols=60  Identities=17%  Similarity=0.211  Sum_probs=45.3

Q ss_pred             cEE-EEcCCchhHHHHHHc-CCc-ccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755           15 DVI-VYDKNTDASQTLAKE-GAN-MALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus        15 ~V~-~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      +|+ ++|+++++++.+.+. |+. .+++.+++++  +.|+|++++|+..+.+.++       ..+..|+.|+
T Consensus        39 ~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~~~H~~~~~-------~al~aGkhVl  103 (390)
T 4h3v_A           39 DLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPGDSHAEIAI-------AALEAGKHVL  103 (390)
T ss_dssp             EEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCGGGHHHHHH-------HHHHTTCEEE
T ss_pred             eEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHH-------HHHHcCCCce
Confidence            555 579999998887665 653 5678999886  4899999999987766553       4566787765

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=94.98  E-value=0.021  Score=42.89  Aligned_cols=30  Identities=27%  Similarity=0.400  Sum_probs=25.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|++++..|++.|++|++.+|++++.+.+.
T Consensus       131 iG~aia~~L~~~G~~V~i~~R~~~~~~~l~  160 (287)
T 1lu9_A          131 VGMRSAALLAGEGAEVVLCGRKLDKAQAAA  160 (287)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             HHHHHHHHHHHCcCEEEEEECCHHHHHHHH
Confidence            478999999999999999999988776654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=94.96  E-value=0.051  Score=39.47  Aligned_cols=76  Identities=11%  Similarity=0.169  Sum_probs=46.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh-ccCCEEEEec--CChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA-SGAEFIISML--PASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~adiVi~~v--p~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.       +.+.- ....++.+-+  .+...++.++   +.+...+.+=
T Consensus        26 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~d~d~~~~~~~~~~~---~~~~~~~g~i   95 (247)
T 3i1j_A           26 IGAAAARAYAAHGASVVLLGRTEASLAEVSDQ-------IKSAGQPQPLIIALNLENATAQQYRELA---ARVEHEFGRL   95 (247)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHTTSCCCEEEECCTTTCCHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEecCHHHHHHHHHH-------HHhcCCCCceEEEeccccCCHHHHHHHH---HHHHHhCCCC
Confidence            58999999999999999999999887665432       11100 1122333333  4445555554   4554444444


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++|++...
T Consensus        96 d~lv~nAg~  104 (247)
T 3i1j_A           96 DGLLHNASI  104 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            667776654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=94.92  E-value=0.074  Score=39.09  Aligned_cols=72  Identities=18%  Similarity=0.147  Sum_probs=43.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+++++.|++.|++|++.+|++++.+...+.- .   .      ....+-.=+.+...++.++   +.+...+..=+++
T Consensus        24 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~---~------~~~~~~~D~~d~~~v~~~~---~~~~~~~g~iD~l   90 (263)
T 3ak4_A           24 IGAAIARALDKAGATVAIADLDVMAAQAVVAGL-E---N------GGFAVEVDVTKRASVDAAM---QKAIDALGGFDLL   90 (263)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-T---T------CCEEEECCTTCHHHHHHHH---HHHHHHHTCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-h---c------CCeEEEEeCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999998776654321 0   0      1222222334445555554   4443333334566


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |++..
T Consensus        91 v~~Ag   95 (263)
T 3ak4_A           91 CANAG   95 (263)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            66654

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.91  E-value=0.069  Score=38.93  Aligned_cols=71  Identities=15%  Similarity=0.178  Sum_probs=44.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.+.-            ....+..=+.+...++.++   +++...+.+=+++
T Consensus        17 iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~~~~~~~D~~~~~~~~~~~---~~~~~~~g~id~l   81 (245)
T 1uls_A           17 IGRATLELFAKEGARLVACDIEEGPLREAAEAV------------GAHPVVMDVADPASVERGF---AEALAHLGRLDGV   81 (245)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------------TCEEEECCTTCHHHHHHHH---HHHHHHHSSCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------------CCEEEEecCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999988776654321            1222222334445555554   4444434344566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus        82 vn~Ag~   87 (245)
T 1uls_A           82 VHYAGI   87 (245)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            666543

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=94.89  E-value=0.094  Score=38.68  Aligned_cols=76  Identities=14%  Similarity=0.184  Sum_probs=46.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.++++.|++.|++|++.+|++++.+...+.       +.+.....++.++.  +.+...++.++   +.+...+.+=+
T Consensus        20 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id   89 (265)
T 3lf2_A           20 IGLATVELLLEAGAAVAFCARDGERLRAAESA-------LRQRFPGARLFASVCDVLDALQVRAFA---EACERTLGCAS   89 (265)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHHSTTCCEEEEECCTTCHHHHHHHH---HHHHHHHCSCS
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHHhcCCceEEEEeCCCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999999877665432       11101111233332  34555566655   55544444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        90 ~lvnnAg~   97 (265)
T 3lf2_A           90 ILVNNAGQ   97 (265)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            77776654

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=94.86  E-value=0.068  Score=39.19  Aligned_cols=73  Identities=16%  Similarity=0.141  Sum_probs=41.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.-          -.....+-.=+.+...++.++   +.+.+...+=+++
T Consensus        19 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id~l   85 (257)
T 3tpc_A           19 LGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----------GAAVRFRNADVTNEADATAAL---AFAKQEFGHVHGL   85 (257)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCC----------------------CEEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----------CCceEEEEccCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999998765543220          012233333344555566655   4454444444667


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus        86 v~nAg~   91 (257)
T 3tpc_A           86 VNCAGT   91 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            766654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=94.84  E-value=0.033  Score=41.47  Aligned_cols=74  Identities=12%  Similarity=0.298  Sum_probs=44.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.++|+.|++.|++|++.+|++++.+...+.       +.+  ...++.++.  +.+...++.++   +.+.....+=.
T Consensus        38 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD  105 (271)
T 4ibo_A           38 LGRAMAEGLAVAGARILINGTDPSRVAQTVQE-------FRN--VGHDAEAVAFDVTSESEIIEAF---ARLDEQGIDVD  105 (271)
T ss_dssp             HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHH-------HHH--TTCCEEECCCCTTCHHHHHHHH---HHHHHHTCCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHh--cCCceEEEEcCCCCHHHHHHHH---HHHHHHCCCCC
Confidence            58999999999999999999999877665432       010  011222222  23445555554   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus       106 ~lv~nAg~  113 (271)
T 4ibo_A          106 ILVNNAGI  113 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            66666553

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=94.82  E-value=0.041  Score=40.62  Aligned_cols=75  Identities=13%  Similarity=0.127  Sum_probs=45.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++.+...+.       +.+ ....++.++.  +.+...++.++   +.+...+.+=+
T Consensus        22 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id   90 (262)
T 3pk0_A           22 IGRGIATVFARAGANVAVAGRSTADIDACVAD-------LDQ-LGSGKVIGVQTDVSDRAQCDALA---GRAVEEFGGID   90 (262)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHT-TSSSCEEEEECCTTSHHHHHHHH---HHHHHHHSCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHh-hCCCcEEEEEcCCCCHHHHHHHH---HHHHHHhCCCC
Confidence            58999999999999999999999887665432       000 0012333332  33445555554   44444444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        91 ~lvnnAg~   98 (262)
T 3pk0_A           91 VVCANAGV   98 (262)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            67766553

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=94.81  E-value=0.052  Score=39.65  Aligned_cols=30  Identities=23%  Similarity=0.407  Sum_probs=26.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.
T Consensus        19 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~   48 (247)
T 2jah_A           19 IGEATARALAAEGAAVAIAARRVEKLRALG   48 (247)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            589999999999999999999988766554

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=94.79  E-value=0.061  Score=39.42  Aligned_cols=74  Identities=20%  Similarity=0.333  Sum_probs=43.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.       +.+  ...++.++  =+.+...++.++   +.+...+.+=.
T Consensus        14 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~id   81 (256)
T 1geg_A           14 IGKAIALRLVKDGFAVAIADYNDATAKAVASE-------INQ--AGGHAVAVKVDVSDRDQVFAAV---EQARKTLGGFD   81 (256)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTSHHHHHHHH---HHHHHHTTCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHh--cCCcEEEEEecCCCHHHHHHHH---HHHHHHhCCCC
Confidence            58999999999999999999998876654321       110  01222222  233445555554   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        82 ~lv~nAg~   89 (256)
T 1geg_A           82 VIVNNAGV   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            66666543

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=94.79  E-value=0.063  Score=39.94  Aligned_cols=73  Identities=16%  Similarity=0.163  Sum_probs=46.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.-          -.+...+-.=+.+...++.++   +.+...+.+=+++
T Consensus        40 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD~l  106 (272)
T 4dyv_A           40 VGRAVAVALAGAGYGVALAGRRLDALQETAAEI----------GDDALCVPTDVTDPDSVRALF---TATVEKFGRVDVL  106 (272)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------TSCCEEEECCTTSHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------CCCeEEEEecCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999998877654420          012222333344555566655   4444444444666


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus       107 VnnAg~  112 (272)
T 4dyv_A          107 FNNAGT  112 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            766554

>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}

Probab=94.78  E-value=0.053  Score=43.51  Aligned_cols=92  Identities=14%  Similarity=0.203  Sum_probs=57.3

Q ss_pred             CCcEE-EEcCCchhHHHHHHcCCcccCCHHHHhc--cCCEEEEecCC-hHHHHHHhcCCccccccCCCCcEEEeccCC-C
Q psy755           13 GHDVI-VYDKNTDASQTLAKEGANMALSLSTLAS--GAEFIISMLPA-SQDVLDAYDGSDGILKHAKPGVIVIDSSTV-D   87 (183)
Q Consensus        13 g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~-~~~~~~v~~~~~~l~~~l~~~~iiid~s~~-~   87 (183)
                      +.+|+ ++|+++++.+.+. .+...+++.+++++  +.|+|++++|. ..+.+.+       ...+..|+.|+-.... .
T Consensus        43 ~i~lvaV~d~~~~~~~~~~-~~~~~~~d~~ell~d~diDvVve~tp~~~~h~~~~-------~~AL~aGKhVvtenkal~  114 (444)
T 3mtj_A           43 EIRVVRAAVRNLDKAEALA-GGLPLTTNPFDVVDDPEIDIVVELIGGLEPARELV-------MQAIANGKHVVTANKHLV  114 (444)
T ss_dssp             CEEEEEEECSCHHHHHHHH-TTCCEESCTHHHHTCTTCCEEEECCCSSTTHHHHH-------HHHHHTTCEEEECCHHHH
T ss_pred             CEEEEEEEECCHHHhhhhc-ccCcccCCHHHHhcCCCCCEEEEcCCCchHHHHHH-------HHHHHcCCEEEECCcccC
Confidence            34555 5699998776653 35566778899886  57999999986 3333333       3567789988733221 1


Q ss_pred             chhHHHHHHHHHhcCCcEE-eecccC
Q psy755           88 PQVPQTLSNLAREKQITFL-DAPVSG  112 (183)
Q Consensus        88 ~~~~~~~~~~~~~~g~~~~-~~~~~~  112 (183)
                      ......+.+..++.|..+. .+.+.+
T Consensus       115 a~~~~eL~~~A~~~gv~l~~Ea~V~~  140 (444)
T 3mtj_A          115 AKYGNEIFAAAQAKGVMVTFEAAVAG  140 (444)
T ss_dssp             HHHHHHHHHHHHHHTCCEECGGGSST
T ss_pred             HHHHHHHHHHHHHhCCeEEEEEeeeC
Confidence            1223556666667788774 444444

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=94.77  E-value=0.053  Score=40.45  Aligned_cols=71  Identities=21%  Similarity=0.228  Sum_probs=44.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.++|+.|++.|++|++.+|++++.+...+.-            ..++.++  =+.+...++.++   +.+...+.+=.
T Consensus        39 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD  103 (277)
T 4dqx_A           39 IGRATAELFAKNGAYVVVADVNEDAAVRVANEI------------GSKAFGVRVDVSSAKDAESMV---EKTTAKWGRVD  103 (277)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------------CTTEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------CCceEEEEecCCCHHHHHHHH---HHHHHHcCCCC
Confidence            589999999999999999999998877665430            1122222  234445555554   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus       104 ~lv~nAg~  111 (277)
T 4dqx_A          104 VLVNNAGF  111 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            66666553

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=94.75  E-value=0.056  Score=39.75  Aligned_cols=73  Identities=16%  Similarity=0.236  Sum_probs=45.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.-          -.....+-.=+.+...++.++   +.+...+.+=+++
T Consensus        20 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~id~l   86 (259)
T 4e6p_A           20 IGRAFAEAYVREGATVAIADIDIERARQAAAEI----------GPAAYAVQMDVTRQDSIDAAI---AATVEHAGGLDIL   86 (259)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CTTEEEEECCTTCHHHHHHHH---HHHHHHSSSCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCCceEEEeeCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999998877654321          001122222234445555554   4444444444666


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            766554

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=94.72  E-value=0.053  Score=39.67  Aligned_cols=73  Identities=12%  Similarity=0.161  Sum_probs=46.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.-       .   .....+-+=+.+...++.++   +++...+.+=+++
T Consensus        21 IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~---~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD~l   87 (248)
T 3op4_A           21 IGKAIAELLAERGAKVIGTATSESGAQAISDYL-------G---DNGKGMALNVTNPESIEAVL---KAITDEFGGVDIL   87 (248)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-------G---GGEEEEECCTTCHHHHHHHH---HHHHHHHCCCSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------c---ccceEEEEeCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999998776654320       0   01122222344555666665   5554444444667


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      +++...
T Consensus        88 v~nAg~   93 (248)
T 3op4_A           88 VNNAGI   93 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            776654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=94.72  E-value=0.11  Score=38.39  Aligned_cols=76  Identities=12%  Similarity=0.128  Sum_probs=44.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.+.       +.+.....++.++.  +.+...++.++   +++...+.+=+
T Consensus        25 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~id   94 (267)
T 1iy8_A           25 LGRATAVRLAAEGAKLSLVDVSSEGLEASKAA-------VLETAPDAEVLTTVADVSDEAQVEAYV---TATTERFGRID   94 (267)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHHCTTCCEEEEECCTTSHHHHHHHH---HHHHHHHSCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhhcCCceEEEEEccCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999998876654321       11110122333332  33445555554   44444443445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        95 ~lv~nAg~  102 (267)
T 1iy8_A           95 GFFNNAGI  102 (267)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            66766543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=94.70  E-value=0.046  Score=39.70  Aligned_cols=73  Identities=16%  Similarity=0.196  Sum_probs=45.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.-       .   .....+..=+.+...++.++   +.+......=.++
T Consensus        15 IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~---~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~id~l   81 (235)
T 3l6e_A           15 LGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-------G---NAVIGIVADLAHHEDVDVAF---AAAVEWGGLPELV   81 (235)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-------G---GGEEEEECCTTSHHHHHHHH---HHHHHHHCSCSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-------c---CCceEEECCCCCHHHHHHHH---HHHHHhcCCCcEE
Confidence            589999999999999999999998877654321       0   11222222234455555555   4444444444566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus        82 vnnAg~   87 (235)
T 3l6e_A           82 LHCAGT   87 (235)
T ss_dssp             EEECCC
T ss_pred             EECCCC
Confidence            666554

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=94.69  E-value=0.054  Score=40.05  Aligned_cols=72  Identities=10%  Similarity=0.079  Sum_probs=44.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.- .         .+...+..=+.+...++.++   +++...+.+=+++
T Consensus        18 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~---------~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~iD~l   84 (263)
T 2a4k_A           18 IGRAALDLFAREGASLVAVDREERLLAEAVAAL-E---------AEAIAVVADVSDPKAVEAVF---AEALEEFGRLHGV   84 (263)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-C---------SSEEEEECCTTSHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-c---------CceEEEEcCCCCHHHHHHHH---HHHHHHcCCCcEE
Confidence            589999999999999999999998777655431 0         11122222233445555554   4444444444666


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |++..
T Consensus        85 vnnAg   89 (263)
T 2a4k_A           85 AHFAG   89 (263)
T ss_dssp             EEGGG
T ss_pred             EECCC
Confidence            66654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=94.69  E-value=0.083  Score=37.98  Aligned_cols=31  Identities=29%  Similarity=0.332  Sum_probs=26.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+
T Consensus        17 iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   47 (234)
T 2ehd_A           17 IGEATARLLHAKGYRVGLMARDEKRLQALAA   47 (234)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            5899999999999999999999887766543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=94.69  E-value=0.066  Score=39.84  Aligned_cols=74  Identities=20%  Similarity=0.268  Sum_probs=44.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.+.       +.+.  ..++.++  =+.+...++.++   +.+...+..=.
T Consensus        34 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~--~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iD  101 (277)
T 2rhc_B           34 IGLEIARRLGKEGLRVFVCARGEEGLRTTLKE-------LREA--GVEADGRTCDVRSVPEIEALV---AAVVERYGPVD  101 (277)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHT--TCCEEEEECCTTCHHHHHHHH---HHHHHHTCSCS
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhc--CCceEEEECCCCCHHHHHHHH---HHHHHHhCCCC
Confidence            58999999999999999999998876554321       1110  1223222  233445555554   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus       102 ~lv~~Ag~  109 (277)
T 2rhc_B          102 VLVNNAGR  109 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            66766543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=94.68  E-value=0.074  Score=38.99  Aligned_cols=73  Identities=14%  Similarity=0.139  Sum_probs=44.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.+.-       .   .....+..=+.+...++.++   +.+.+.+.+=+++
T Consensus        17 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~---~~~~~~~~D~~~~~~~~~~~---~~~~~~~g~iD~l   83 (254)
T 1hdc_A           17 LGAEAARQAVAAGARVVLADVLDEEGAATAREL-------G---DAARYQHLDVTIEEDWQRVV---AYAREEFGSVDGL   83 (254)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------G---GGEEEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------C---CceeEEEecCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999988776654321       0   11122222233445555554   4444444344566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus        84 v~nAg~   89 (254)
T 1hdc_A           84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            666543

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=94.68  E-value=0.049  Score=41.73  Aligned_cols=103  Identities=13%  Similarity=0.076  Sum_probs=60.5

Q ss_pred             cH-HHHHHHHhCCCcEEEEcCCch--hHHHHHHcCCccc--CCHHHHh-ccCCEEEEe--cCChHH-HHHHhc-C-----
Q psy755            2 GS-HMARNLLKNGHDVIVYDKNTD--ASQTLAKEGANMA--LSLSTLA-SGAEFIISM--LPASQD-VLDAYD-G-----   66 (183)
Q Consensus         2 G~-~iA~~l~~~g~~V~~~~~~~~--~~~~~~~~g~~~~--~~~~~~~-~~adiVi~~--vp~~~~-~~~v~~-~-----   66 (183)
                      |. ++|+.|.+.|++|+++|+.+.  ..+.+.+.|+...  .+..++. .++|+||.+  +|...+ +..... +     
T Consensus        16 Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~   95 (326)
T 3eag_A           16 FMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVVEAILNLGLPYIS   95 (326)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHHHHHHHcCCcEEe
Confidence            55 488999999999999998653  4566777787543  3444444 479999986  443322 222210 0     


Q ss_pred             Ccc-ccccCCCCc-E-EEeccCCCchhHHHHHHHHHhcCCc
Q psy755           67 SDG-ILKHAKPGV-I-VIDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        67 ~~~-l~~~l~~~~-i-iid~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      ..+ +...+.++. + -|-.|+.+..+..-+...+...|..
T Consensus        96 ~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~~  136 (326)
T 3eag_A           96 GPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLA  136 (326)
T ss_dssp             HHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCCC
Confidence            001 112233333 3 3455566677777777777776643

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=94.68  E-value=0.044  Score=41.02  Aligned_cols=74  Identities=16%  Similarity=0.170  Sum_probs=46.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.-       .+  ...++.++.  +.+...++.++   +++...+.+=+
T Consensus        40 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-------~~--~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD  107 (283)
T 3v8b_A           40 IGRATALALAADGVTVGALGRTRTEVEEVADEI-------VG--AGGQAIALEADVSDELQMRNAV---RDLVLKFGHLD  107 (283)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-------TT--TTCCEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-------Hh--cCCcEEEEEccCCCHHHHHHHH---HHHHHHhCCCC
Confidence            589999999999999999999998877655420       00  112333332  34555566655   45544444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus       108 ~lVnnAg~  115 (283)
T 3v8b_A          108 IVVANAGI  115 (283)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            67766554

>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*

Probab=94.67  E-value=0.42  Score=31.30  Aligned_cols=110  Identities=13%  Similarity=0.143  Sum_probs=63.0

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCC------hH-HHHHHhcCCccccccCC
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPA------SQ-DVLDAYDGSDGILKHAK   75 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~------~~-~~~~v~~~~~~l~~~l~   75 (183)
                      ..|+..|.+.|++|.+++.+...              .. .+.++|.|++..|.      +. .++..+   +.+...+ 
T Consensus        17 ~~ia~~l~~~g~~v~~~~~~~~~--------------~~-~l~~~d~iiig~pty~~g~~p~~~~~~fl---~~l~~~l-   77 (138)
T 5nul_A           17 ELIAKGIIESGKDVNTINVSDVN--------------ID-ELLNEDILILGCSAMTDEVLEESEFEPFI---EEISTKI-   77 (138)
T ss_dssp             HHHHHHHHHTTCCCEEEEGGGCC--------------HH-HHTTCSEEEEEECCBTTTBCCTTTHHHHH---HHHGGGC-
T ss_pred             HHHHHHHHHCCCeEEEEEhhhCC--------------HH-HHhhCCEEEEEcCccCCCCCChHHHHHHH---HHHHhhc-
Confidence            45666677777777777644321              22 35679999999984      22 456655   5554443 


Q ss_pred             CCcEE--EeccCC-CchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhc
Q psy755           76 PGVIV--IDSSTV-DPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus        76 ~~~ii--id~s~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g  144 (183)
                      +++.+  +.+... .......+.+.+.+.|...+..++            .+-...+++. ++++++.+.+.
T Consensus        78 ~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~~~------------~~~~~p~~~d-~~~~~~~~~l~  136 (138)
T 5nul_A           78 SGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVETPL------------IVQNEPDEAE-QDCIEFGKKIA  136 (138)
T ss_dssp             TTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSCCE------------EEESSCGGGH-HHHHHHHHHHH
T ss_pred             CCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECCce------------EEecCCCHHH-HHHHHHHHHHh
Confidence            45443  222222 245667888888888887775321            1111124455 77777766653

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=94.67  E-value=0.052  Score=40.50  Aligned_cols=73  Identities=21%  Similarity=0.231  Sum_probs=45.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.-          -.....+-.=+.+...++.++   +.+...+..=+++
T Consensus        41 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD~l  107 (277)
T 3gvc_A           41 IGLAVARRLADEGCHVLCADIDGDAADAAATKI----------GCGAAACRVDVSDEQQIIAMV---DACVAAFGGVDKL  107 (277)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----------CSSCEEEECCTTCHHHHHHHH---HHHHHHHSSCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----------CCcceEEEecCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999998877654320          011222222334555555554   4444444444566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            666554

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=94.66  E-value=0.055  Score=40.84  Aligned_cols=74  Identities=12%  Similarity=0.161  Sum_probs=44.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEE--EecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFII--SMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi--~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.       +.+  ...++.+  +=+.+...++.++   +.+.....+=.
T Consensus        43 IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~--~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~id  110 (301)
T 3tjr_A           43 IGLATATEFARRGARLVLSDVDQPALEQAVNG-------LRG--QGFDAHGVVCDVRHLDEMVRLA---DEAFRLLGGVD  110 (301)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHHHHHHH---HHHHHHHSSCS
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHh--cCCceEEEEccCCCHHHHHHHH---HHHHHhCCCCC
Confidence            58999999999999999999999887665432       111  0122322  2234445555554   44444333445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++.+.
T Consensus       111 ~lvnnAg~  118 (301)
T 3tjr_A          111 VVFSNAGI  118 (301)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            66666553

>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1

Probab=94.64  E-value=0.094  Score=40.73  Aligned_cols=77  Identities=14%  Similarity=0.212  Sum_probs=46.7

Q ss_pred             cHHHHHHHHhCCC-cEEEEc-C-Cch-hHHH----HHHcCCccc-CCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLKNGH-DVIVYD-K-NTD-ASQT----LAKEGANMA-LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~-~-~~~-~~~~----~~~~g~~~~-~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |..|.+.|.++.. ++.... + +.. ++..    +. ...... .+.+++.+++|+||+|+|.....+-+        +
T Consensus        26 G~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~-~~l~~~~~~~~~~~~~~Dvvf~alp~~~s~~~~--------~   96 (351)
T 1vkn_A           26 GLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTL-ENSILSEFDPEKVSKNCDVLFTALPAGASYDLV--------R   96 (351)
T ss_dssp             HHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGC-CCCBCBCCCHHHHHHHCSEEEECCSTTHHHHHH--------T
T ss_pred             HHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhc-cCceEEeCCHHHhhcCCCEEEECCCcHHHHHHH--------H
Confidence            6778888888754 665543 2 222 1221    11 122222 24555557899999999986653333        3


Q ss_pred             cCCCCcEEEeccCCCc
Q psy755           73 HAKPGVIVIDSSTVDP   88 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~   88 (183)
                      .+ .|..|||.|+...
T Consensus        97 ~~-~g~~VIDlSsdfR  111 (351)
T 1vkn_A           97 EL-KGVKIIDLGADFR  111 (351)
T ss_dssp             TC-CSCEEEESSSTTT
T ss_pred             Hh-CCCEEEECChhhh
Confidence            34 7999999998753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=94.63  E-value=0.06  Score=39.51  Aligned_cols=29  Identities=24%  Similarity=0.479  Sum_probs=25.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|.++++.|++.|++|++.+|++++.+..
T Consensus        26 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~   54 (260)
T 2zat_A           26 IGLAIARRLAQDGAHVVVSSRKQENVDRT   54 (260)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58999999999999999999998876554

>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*

Probab=94.63  E-value=0.073  Score=40.14  Aligned_cols=97  Identities=16%  Similarity=0.109  Sum_probs=62.1

Q ss_pred             CcHHHHHHHHh----CCCcEE-EEcCCchhHHHHHHcCCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLLK----NGHDVI-VYDKNTDASQTLAKEGANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~----~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||...+..+.+    .+.+++ ++|++...    ...|+. ..+.+++++  +.|+|++++|...+.+.+       ...
T Consensus        18 iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~~~-------~~a   85 (294)
T 1lc0_A           18 AGSVRLRDLKDPRSAAFLNLIGFVSRRELG----SLDEVR-QISLEDALRSQEIDVAYICSESSSHEDYI-------RQF   85 (294)
T ss_dssp             HHHHHHHHHTSHHHHTTEEEEEEECSSCCC----EETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHHHH-------HHH
T ss_pred             HHHHHHHHHhccccCCCEEEEEEECchHHH----HHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHHHH-------HHH
Confidence            45566666654    345655 57876421    112443 468899886  689999999987765555       345


Q ss_pred             CCCCcEEE-ec-cCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           74 AKPGVIVI-DS-STVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        74 l~~~~iii-d~-s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      +..|+.|+ +- -+......+.+.+..+++|..+..+.
T Consensus        86 l~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~  123 (294)
T 1lc0_A           86 LQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEH  123 (294)
T ss_dssp             HHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             HHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEE
Confidence            66787554 43 23456667788888888887765543

>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A

Probab=94.60  E-value=0.2  Score=40.70  Aligned_cols=102  Identities=17%  Similarity=0.199  Sum_probs=61.0

Q ss_pred             cHH-HHHHHHhCCCcEEEEcCCch-hHHHHHHcCCcccC-CHHHHhccCCEEEEe--cCChHH-HHHHhc------CCcc
Q psy755            2 GSH-MARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMAL-SLSTLASGAEFIISM--LPASQD-VLDAYD------GSDG   69 (183)
Q Consensus         2 G~~-iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~-~~~~~~~~adiVi~~--vp~~~~-~~~v~~------~~~~   69 (183)
                      |.+ +|+.|.+.|++|+++|..+. ..+.+.+.|+.... ...+.+.++|+||..  +|...+ +.....      +.-+
T Consensus        34 G~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~~a~~~gi~v~~~~e  113 (494)
T 4hv4_A           34 GMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIVAAREARIPVIRRAE  113 (494)
T ss_dssp             THHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHHHHHHTTCCEEEHHH
T ss_pred             hHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHHHHHHCCCCEEcHHH
Confidence            564 89999999999999996654 45667777875432 223446789999986  444322 222110      0001


Q ss_pred             ccccCCCCc--EEEeccCCCchhHHHHHHHHHhcCC
Q psy755           70 ILKHAKPGV--IVIDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        70 l~~~l~~~~--iiid~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      +...+.+..  +-|-.|+.+..+..-+...+...|.
T Consensus       114 ~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g~  149 (494)
T 4hv4_A          114 MLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAGL  149 (494)
T ss_dssp             HHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcCC
Confidence            112222333  3355556677777777888887775

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=94.58  E-value=0.057  Score=39.94  Aligned_cols=75  Identities=9%  Similarity=0.189  Sum_probs=44.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.       +.+. ...++.++.  +.+...++.++   +.+...+.+=+
T Consensus        32 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~-~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id  100 (266)
T 4egf_A           32 IGADIARAFAAAGARLVLSGRDVSELDAARRA-------LGEQ-FGTDVHTVAIDLAEPDAPAELA---RRAAEAFGGLD  100 (266)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHH-HCCCEEEEECCTTSTTHHHHHH---HHHHHHHTSCS
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHHh-cCCcEEEEEecCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999999877665432       1110 122333332  33445555554   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus       101 ~lv~nAg~  108 (266)
T 4egf_A          101 VLVNNAGI  108 (266)
T ss_dssp             EEEEECCC
T ss_pred             EEEECCCc
Confidence            66665543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=94.57  E-value=0.17  Score=37.60  Aligned_cols=73  Identities=14%  Similarity=0.129  Sum_probs=46.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc--hhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT--DASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++  +..+.+.+.+           .....+..=+.+...++.++   +++...+.+=.
T Consensus        40 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~-----------~~~~~~~~Dl~~~~~v~~~~---~~~~~~~g~id  105 (280)
T 3nrc_A           40 IAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF-----------NPAAVLPCDVISDQEIKDLF---VELGKVWDGLD  105 (280)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG-----------CCSEEEECCTTCHHHHHHHH---HHHHHHCSSCC
T ss_pred             HHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc-----------CCceEEEeecCCHHHHHHHH---HHHHHHcCCCC
Confidence            58899999999999999999987  4444443321           11223333344556666665   55555555556


Q ss_pred             EEEeccCCC
Q psy755           79 IVIDSSTVD   87 (183)
Q Consensus        79 iiid~s~~~   87 (183)
                      ++|++....
T Consensus       106 ~li~nAg~~  114 (280)
T 3nrc_A          106 AIVHSIAFA  114 (280)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCccC
Confidence            777776654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=94.54  E-value=0.041  Score=40.46  Aligned_cols=73  Identities=14%  Similarity=0.121  Sum_probs=44.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.-          -.....+-.=+.+...++.++   +.+...+.+=+++
T Consensus        20 IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id~l   86 (255)
T 4eso_A           20 MGLATVRRLVEGGAEVLLTGRNESNIARIREEF----------GPRVHALRSDIADLNEIAVLG---AAAGQTLGAIDLL   86 (255)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------GGGEEEEECCTTCHHHHHHHH---HHHHHHHSSEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCcceEEEccCCCHHHHHHHH---HHHHHHhCCCCEE
Confidence            589999999999999999999998877655421          011122222234445555554   4444444344566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      +++...
T Consensus        87 v~nAg~   92 (255)
T 4eso_A           87 HINAGV   92 (255)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            666544

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=94.53  E-value=0.06  Score=40.19  Aligned_cols=71  Identities=18%  Similarity=0.205  Sum_probs=46.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+..            ..++.++  =+.+...++.++   +++...+.+=+
T Consensus        17 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iD   81 (281)
T 3zv4_A           17 LGRALVDRFVAEGARVAVLDKSAERLRELEVAH------------GGNAVGVVGDVRSLQDQKRAA---ERCLAAFGKID   81 (281)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT------------BTTEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc------------CCcEEEEEcCCCCHHHHHHHH---HHHHHhcCCCC
Confidence            589999999999999999999998877655431            1223332  234445555555   45544444556


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            67766654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=94.53  E-value=0.078  Score=39.30  Aligned_cols=74  Identities=14%  Similarity=0.091  Sum_probs=44.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccC-CCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHA-KPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l-~~~   77 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.       +.+  ...++.++  =+.++..++.++   +.+...+ .+=
T Consensus        33 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~---~~~~~~~~g~i  100 (273)
T 1ae1_A           33 IGYAIVEELAGLGARVYTCSRNEKELDECLEI-------WRE--KGLNVEGSVCDLLSRTERDKLM---QTVAHVFDGKL  100 (273)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHHHHHHH---HHHHHHTTSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHh--cCCceEEEECCCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999998876654321       111  01233322  233445555554   4444444 344


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      +++|++...
T Consensus       101 d~lv~nAg~  109 (273)
T 1ae1_A          101 NILVNNAGV  109 (273)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCCC
Confidence            566766553

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=94.51  E-value=0.067  Score=39.08  Aligned_cols=29  Identities=21%  Similarity=0.302  Sum_probs=25.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|+.+++.|++.|++|++.+|++++.+..
T Consensus        25 iG~~la~~l~~~G~~V~~~~r~~~~~~~~   53 (260)
T 3awd_A           25 IGLACVTALAEAGARVIIADLDEAMATKA   53 (260)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58999999999999999999998766544

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=94.50  E-value=0.077  Score=39.34  Aligned_cols=75  Identities=13%  Similarity=0.158  Sum_probs=45.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|.+|++.+|+.+..+.+.+        ..+.-.++..+-.=+.++.+++.++   ++..+.+.+=+++
T Consensus        19 IG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~--------~~~~~~~~~~~~~Dv~~~~~v~~~v---~~~~~~~G~iDiL   87 (258)
T 4gkb_A           19 IGGAISMRLAEERAIPVVFARHAPDGAFLDA--------LAQRQPRATYLPVELQDDAQCRDAV---AQTIATFGRLDGL   87 (258)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCCCHHHHHH--------HHHHCTTCEEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHcCCEEEEEECCcccHHHHHH--------HHhcCCCEEEEEeecCCHHHHHHHH---HHHHHHhCCCCEE
Confidence            5899999999999999999998876443221        1111112222222345556666665   5555555555667


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |+....
T Consensus        88 VNnAGi   93 (258)
T 4gkb_A           88 VNNAGV   93 (258)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            766543

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=94.49  E-value=0.059  Score=39.97  Aligned_cols=74  Identities=19%  Similarity=0.120  Sum_probs=46.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++.+|++++.+...+.-          -.....+..=+.+...++.++   +.+...+.+=+++
T Consensus        23 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id~l   89 (271)
T 3tzq_B           23 IGLETSRVLARAGARVVLADLPETDLAGAAASV----------GRGAVHHVVDLTNEVSVRALI---DFTIDTFGRLDIV   89 (271)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----------CTTCEEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------CCCeEEEECCCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999998776654321          011222223334555555555   4444444444667


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      +++....
T Consensus        90 v~nAg~~   96 (271)
T 3tzq_B           90 DNNAAHS   96 (271)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            7666543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=94.49  E-value=0.07  Score=38.46  Aligned_cols=75  Identities=19%  Similarity=0.305  Sum_probs=45.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.       +.+. ...++.++.  +.+...++.++   +++.+.+.+=.
T Consensus        14 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~-~~~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~id   82 (235)
T 3l77_A           14 IGEAIARALARDGYALALGARSVDRLEKIAHE-------LMQE-QGVEVFYHHLDVSKAESVEEFS---KKVLERFGDVD   82 (235)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHH-HCCCEEEEECCTTCHHHHHHHC---C-HHHHHSSCS
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhh-cCCeEEEEEeccCCHHHHHHHH---HHHHHhcCCCC
Confidence            58999999999999999999999887665432       1100 123333333  34445555554   44444444445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        83 ~li~~Ag~   90 (235)
T 3l77_A           83 VVVANAGL   90 (235)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            66766544

>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*

Probab=94.47  E-value=0.015  Score=45.84  Aligned_cols=73  Identities=19%  Similarity=0.184  Sum_probs=49.8

Q ss_pred             cHHHHHHHHhCCC---cEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC-CCC
Q psy755            2 GSHMARNLLKNGH---DVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA-KPG   77 (183)
Q Consensus         2 G~~iA~~l~~~g~---~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l-~~~   77 (183)
                      |..-+..+...|.   +|.+||+++...      |..     .+.+.++|+||-|+..+...+.++  +++....+ ++|
T Consensus       227 G~~A~~~a~~lGa~~~~V~v~D~~~~~~------g~~-----~~~i~~aDivIn~vlig~~aP~Lv--t~e~v~~m~k~g  293 (394)
T 2qrj_A          227 GSGAIDLLHKVGIPDANILKWDIKETSR------GGP-----FDEIPQADIFINCIYLSKPIAPFT--NMEKLNNPNRRL  293 (394)
T ss_dssp             HHHHHHHHHHTTCCGGGEEEECHHHHTT------CSC-----CTHHHHSSEEEECCCCCSSCCCSC--CHHHHCCTTCCC
T ss_pred             HHHHHHHHHhCCCCcCceEEeecccccc------CCc-----hhhHhhCCEEEECcCcCCCCCccc--CHHHHhcCcCCC
Confidence            4455666778887   899999877321      322     134668999999998644333444  25555667 899


Q ss_pred             cEEEeccCCC
Q psy755           78 VIVIDSSTVD   87 (183)
Q Consensus        78 ~iiid~s~~~   87 (183)
                      .+|+|.+...
T Consensus       294 sVIVDVA~D~  303 (394)
T 2qrj_A          294 RTVVDVSADT  303 (394)
T ss_dssp             CEEEETTCCT
T ss_pred             eEEEEEecCC
Confidence            9999998643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=94.47  E-value=0.045  Score=40.80  Aligned_cols=76  Identities=18%  Similarity=0.251  Sum_probs=46.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh-ccCCEEEE--ecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA-SGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.       +.+.- ...++.++  =+.+...++.++   +++.....+=
T Consensus        23 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~i   92 (281)
T 3svt_A           23 IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQE-------LEALGANGGAIRYEPTDITNEDETARAV---DAVTAWHGRL   92 (281)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHTTCCSSCEEEEEECCTTSHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHHhCCCCceEEEEeCCCCCHHHHHHHH---HHHHHHcCCC
Confidence            58999999999999999999999877665432       00000 01123333  234455556555   5554444444


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++|++...
T Consensus        93 d~lv~nAg~  101 (281)
T 3svt_A           93 HGVVHCAGG  101 (281)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            677776654

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=94.44  E-value=0.077  Score=38.97  Aligned_cols=74  Identities=14%  Similarity=0.207  Sum_probs=44.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccC-CCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHA-KPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l-~~~   77 (183)
                      +|+++++.|++.|++|++.+|++++.+...+.       +.+  ...++.++  =+.+...++.++   +.+...+ .+=
T Consensus        21 iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~---~~~~~~~~g~i   88 (260)
T 2ae2_A           21 IGYGIVEELASLGASVYTCSRNQKELNDCLTQ-------WRS--KGFKVEASVCDLSSRSERQELM---NTVANHFHGKL   88 (260)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHH--TTCEEEEEECCTTCHHHHHHHH---HHHHHHTTTCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHh--cCCcEEEEEcCCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999998876654321       110  01223222  234445555555   4444444 344


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++|++...
T Consensus        89 d~lv~~Ag~   97 (260)
T 2ae2_A           89 NILVNNAGI   97 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            566766653

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=94.39  E-value=0.056  Score=40.74  Aligned_cols=75  Identities=13%  Similarity=0.173  Sum_probs=46.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.-...        ...++.++  =+.+...++.++   +.+...+.+=.
T Consensus        53 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD  121 (293)
T 3rih_A           53 IGRGIATVFARAGANVAVAARSPRELSSVTAELGEL--------GAGNVIGVRLDVSDPGSCADAA---RTVVDAFGALD  121 (293)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS--------SSSCEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh--------CCCcEEEEEEeCCCHHHHHHHH---HHHHHHcCCCC
Confidence            589999999999999999999998877654420000        00223333  234455555555   44544444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus       122 ~lvnnAg~  129 (293)
T 3rih_A          122 VVCANAGI  129 (293)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            67766554

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=94.38  E-value=0.11  Score=39.03  Aligned_cols=76  Identities=7%  Similarity=0.032  Sum_probs=46.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+++|+.|++.|++|++.+|+++..+.+.+.        .+.......+-.=+.+...++.++   +.+...+.+=.++
T Consensus        44 IG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD~l  112 (296)
T 3k31_A           44 LAWGIAKAVCAQGAEVALTYLSETFKKRVDPL--------AESLGVKLTVPCDVSDAESVDNMF---KVLAEEWGSLDFV  112 (296)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--------HHHHTCCEEEECCTTCHHHHHHHH---HHHHHHHSCCSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--------HHhcCCeEEEEcCCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            58899999999999999999997654443221        011111222223344556666665   5555544455677


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      |++....
T Consensus       113 VnnAG~~  119 (296)
T 3k31_A          113 VHAVAFS  119 (296)
T ss_dssp             EECCCCC
T ss_pred             EECCCcC
Confidence            7776554

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=94.38  E-value=0.38  Score=35.32  Aligned_cols=89  Identities=19%  Similarity=0.172  Sum_probs=51.3

Q ss_pred             CcHHHHHHHHhC-CCcEEE-EcCCchhHHHHHHcCCcccCCHHHHhc-cCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKN-GHDVIV-YDKNTDASQTLAKEGANMALSLSTLAS-GAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~-~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+.+++.+.+. +++++. +|++               +++.+++. .+|+||-.+++.. ....+      ...+..|
T Consensus        12 mG~~i~~~~~~~~~~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p~a-~~~~~------~~a~~~g   69 (245)
T 1p9l_A           12 VGTTMVRAVAAADDLTLSAELDAG---------------DPLSLLTDGNTEVVIDFTHPDV-VMGNL------EFLIDNG   69 (245)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEECTT---------------CCTHHHHHTTCCEEEECSCTTT-HHHHH------HHHHHTT
T ss_pred             HHHHHHHHHHhCCCCEEEEEEccC---------------CCHHHHhccCCcEEEEccChHH-HHHHH------HHHHHcC
Confidence            788999988765 888874 5664               24445443 7899996775533 33332      3345567


Q ss_pred             cEEEeccCCCch-hHHHHHHHHHhc-CCcEEeeccc
Q psy755           78 VIVIDSSTVDPQ-VPQTLSNLAREK-QITFLDAPVS  111 (183)
Q Consensus        78 ~iiid~s~~~~~-~~~~~~~~~~~~-g~~~~~~~~~  111 (183)
                      ..+|-.|+.... ....+.+..++. +..++-.|-+
T Consensus        70 ~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~  105 (245)
T 1p9l_A           70 IHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNF  105 (245)
T ss_dssp             CEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCC
T ss_pred             CCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCc
Confidence            766665554433 334444444433 5555554443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=94.36  E-value=0.014  Score=41.91  Aligned_cols=57  Identities=16%  Similarity=0.276  Sum_probs=39.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc------CCcccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE------GANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|+.+++.|.+.|++|++.+|++++.+.+...      .+...+++.++++++|+||.+....
T Consensus        16 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~   78 (227)
T 3dhn_A           16 VGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG   78 (227)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred             HHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence            48899999999999999999998865432110      1111223456678999999988553

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=94.36  E-value=0.09  Score=42.02  Aligned_cols=73  Identities=14%  Similarity=0.194  Sum_probs=51.7

Q ss_pred             HHHHHHHHhC-CCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            3 SHMARNLLKN-GHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         3 ~~iA~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      ..|+..|.+. |.+|.+||..-...        ....++.++++++|.|++++..++ .+.+=+  +.+ ..+ ++.+|+
T Consensus       338 ~~i~~~L~~~~g~~V~~~DP~~~~~--------~~~~~~~~~~~~ad~vvi~t~~~~-f~~~d~--~~~-~~~-~~~~i~  404 (431)
T 3ojo_A          338 FDIYELLNQEPDIEVCAYDPHVELD--------FVEHDMSHAVKDASLVLILSDHSE-FKNLSD--SHF-DKM-KHKVIF  404 (431)
T ss_dssp             HHHHHHHHHSTTCEEEEECSSCCCT--------TBCSTTHHHHTTCSEEEECSCCGG-GTSCCG--GGG-TTC-SSCEEE
T ss_pred             HHHHHHHHhhcCCEEEEECCCcccc--------cccCCHHHHHhCCCEEEEecCCHH-HhccCH--HHH-HhC-CCCEEE
Confidence            3578889998 99999999665431        245678899999999999998854 332211  233 333 477999


Q ss_pred             eccCCCc
Q psy755           82 DSSTVDP   88 (183)
Q Consensus        82 d~s~~~~   88 (183)
                      |.-+...
T Consensus       405 D~r~~~~  411 (431)
T 3ojo_A          405 DTKNVVK  411 (431)
T ss_dssp             ESSCCCC
T ss_pred             ECCCCCC
Confidence            9998774

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=94.34  E-value=0.014  Score=40.93  Aligned_cols=56  Identities=16%  Similarity=0.245  Sum_probs=39.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-------ccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-------MALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-------~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|.+.|++|++.+|++++.+.....++.       ..+++.++++++|+||.+...
T Consensus        15 iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~   77 (206)
T 1hdo_A           15 TGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT   77 (206)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             HHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence            48899999999999999999998765432111221       112344567789999988764

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=94.28  E-value=0.04  Score=40.31  Aligned_cols=31  Identities=32%  Similarity=0.501  Sum_probs=27.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|.++++.|++.|++|++.+|++++.+...+
T Consensus        18 IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~   48 (247)
T 3rwb_A           18 IGKAIAARLAADGATVIVSDINAEGAKAAAA   48 (247)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5899999999999999999999988776544

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=94.28  E-value=0.082  Score=38.85  Aligned_cols=30  Identities=20%  Similarity=0.416  Sum_probs=25.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.
T Consensus        19 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   48 (263)
T 3ai3_A           19 IGLAIAEGFAKEGAHIVLVARQVDRLHEAA   48 (263)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            589999999999999999999988766543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=94.28  E-value=0.095  Score=38.77  Aligned_cols=74  Identities=16%  Similarity=0.214  Sum_probs=44.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+.       +.+.  ..++.++  =+.+...++.++   +.+...+.+=.
T Consensus        43 IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-------l~~~--~~~~~~~~~Dl~~~~~v~~~~---~~~~~~~g~iD  110 (272)
T 1yb1_A           43 IGRLTAYEFAKLKSKLVLWDINKHGLEETAAK-------CKGL--GAKVHTFVVDCSNREDIYSSA---KKVKAEIGDVS  110 (272)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHT--TCCEEEEECCTTCHHHHHHHH---HHHHHHTCCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHH-------HHhc--CCeEEEEEeeCCCHHHHHHHH---HHHHHHCCCCc
Confidence            58999999999999999999998876654321       1110  1223222  233445555554   44444444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      +||++...
T Consensus       111 ~li~~Ag~  118 (272)
T 1yb1_A          111 ILVNNAGV  118 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            67776654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=94.26  E-value=0.032  Score=41.73  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=27.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      ||.++|+.|++.|++|++.+|++++.+.+.+
T Consensus        20 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~   50 (280)
T 3tox_A           20 IGRAAALLFAREGAKVVVTARNGNALAELTD   50 (280)
T ss_dssp             HHHHHHHHHHHTTCEEEECCSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            5899999999999999999999988776554

>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*

Probab=94.21  E-value=0.0073  Score=43.69  Aligned_cols=58  Identities=16%  Similarity=0.147  Sum_probs=35.5

Q ss_pred             CcHHHHHH--HHhCCCcEEE-EcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChH
Q psy755            1 MGSHMARN--LLKNGHDVIV-YDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~--l~~~g~~V~~-~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      +|..+++.  +...|+++++ +|.++++..+.... ++...+++++.++..|+|++|+|...
T Consensus        96 ~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~~  157 (215)
T 2vt3_A           96 LGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAVA  157 (215)
T ss_dssp             HHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHHH
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCchh
Confidence            36666763  3345777765 69999876542221 23345678888866699999998744

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=94.17  E-value=0.094  Score=38.81  Aligned_cols=71  Identities=15%  Similarity=0.240  Sum_probs=44.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+.          .  ..++.++  =+.+...++.++   +.+...+..=.
T Consensus        39 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~----------~--~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD  103 (266)
T 3grp_A           39 IGEAIARCFHAQGAIVGLHGTREDKLKEIAAD----------L--GKDVFVFSANLSDRKSIKQLA---EVAEREMEGID  103 (266)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------H--CSSEEEEECCTTSHHHHHHHH---HHHHHHHTSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------h--CCceEEEEeecCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999999887765432          0  1222222  234445555554   44444443445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            66666554

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=94.17  E-value=0.071  Score=39.65  Aligned_cols=30  Identities=13%  Similarity=0.280  Sum_probs=26.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+...
T Consensus        18 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   47 (280)
T 1xkq_A           18 IGRTTAILFAQEGANVTITGRSSERLEETR   47 (280)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999998766543

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=94.16  E-value=0.098  Score=38.75  Aligned_cols=72  Identities=21%  Similarity=0.368  Sum_probs=43.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.-           .....+-.=+.+...++.++   +++...+.+=.++
T Consensus        21 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD~l   86 (270)
T 1yde_A           21 IGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----------PGAVFILCDVTQEDDVKTLV---SETIRRFGRLDCV   86 (270)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------TTEEEEECCTTSHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----------cCCeEEEcCCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            589999999999999999999998776654321           01122222233445555554   4444444344566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus        87 v~nAg~   92 (270)
T 1yde_A           87 VNNAGH   92 (270)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            666543

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=94.14  E-value=0.13  Score=37.66  Aligned_cols=31  Identities=23%  Similarity=0.341  Sum_probs=26.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+
T Consensus        19 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~   49 (264)
T 2pd6_A           19 IGRAVSVRLAGEGATVAACDLDRAAAQETVR   49 (264)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence            5899999999999999999999987766544

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=94.11  E-value=0.16  Score=38.50  Aligned_cols=57  Identities=12%  Similarity=0.159  Sum_probs=37.9

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcC--CchhHHHHH----Hc-----CCcccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGH--DVIVYDK--NTDASQTLA----KE-----GANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~--~~~~~~~~~----~~-----g~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|.+++..|+..|+  +++++|+  ++++++...    ..     ......+..++++++|+||++...+
T Consensus        12 vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~~   81 (303)
T 1o6z_A           12 VGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGIP   81 (303)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred             HHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCCC
Confidence            37889999988876  7999999  776553311    11     1122112366789999999998543

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=94.10  E-value=0.14  Score=37.60  Aligned_cols=76  Identities=5%  Similarity=0.012  Sum_probs=47.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++.+|+....+.+.+.        .+.......+-.=+.+...++.++   +.+...+.+=.++
T Consensus        28 iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id~l   96 (271)
T 3ek2_A           28 IAYGIAKACKREGAELAFTYVGDRFKDRITEF--------AAEFGSELVFPCDVADDAQIDALF---ASLKTHWDSLDGL   96 (271)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--------HHHTTCCCEEECCTTCHHHHHHHH---HHHHHHCSCEEEE
T ss_pred             HHHHHHHHHHHcCCCEEEEecchhhHHHHHHH--------HHHcCCcEEEECCCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            58999999999999999999886543333221        011112334444455666677766   5665555454677


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      |++....
T Consensus        97 v~nAg~~  103 (271)
T 3ek2_A           97 VHSIGFA  103 (271)
T ss_dssp             EECCCCC
T ss_pred             EECCccC
Confidence            7766543

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=94.09  E-value=0.094  Score=38.14  Aligned_cols=74  Identities=20%  Similarity=0.320  Sum_probs=42.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcC-CchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDK-NTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++++.|++.|++|++.+| ++++.+.+.+.       +.+  ...++.++.  +.+...++.++   +++...+.+=
T Consensus        16 iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~---~~~~~~~g~i   83 (246)
T 2uvd_A           16 IGRAIAIDLAKQGANVVVNYAGNEQKANEVVDE-------IKK--LGSDAIAVRADVANAEDVTNMV---KQTVDVFGQV   83 (246)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-------HHH--TTCCEEEEECCTTCHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-------HHh--cCCcEEEEEcCCCCHHHHHHHH---HHHHHHcCCC
Confidence            589999999999999999998 77666544321       111  012233222  33445555554   4444444344


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++|++...
T Consensus        84 d~lv~nAg~   92 (246)
T 2uvd_A           84 DILVNNAGV   92 (246)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            566666553

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=94.09  E-value=0.099  Score=40.13  Aligned_cols=54  Identities=7%  Similarity=-0.057  Sum_probs=38.4

Q ss_pred             cHHHHHHHHhCCC-------cEEEEcCC----chhHHH----HHHc--C----CcccCCHHHHhccCCEEEEecC
Q psy755            2 GSHMARNLLKNGH-------DVIVYDKN----TDASQT----LAKE--G----ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         2 G~~iA~~l~~~g~-------~V~~~~~~----~~~~~~----~~~~--g----~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      |.+++..|+..|+       +|+++|++    +++.+.    +...  .    +...++..+++++||+||++..
T Consensus        18 G~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~aD~Vi~~ag   92 (329)
T 1b8p_A           18 CYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDADVALLVGA   92 (329)
T ss_dssp             HHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTCSEEEECCC
T ss_pred             HHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCCCEEEEeCC
Confidence            6888888988885       89999999    544432    2221  1    1223677888999999999874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=94.09  E-value=0.081  Score=38.61  Aligned_cols=28  Identities=18%  Similarity=0.366  Sum_probs=24.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc-hhHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT-DASQT   28 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~-~~~~~   28 (183)
                      +|.++++.|++.|++|++.+|++ ++.+.
T Consensus        19 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~   47 (249)
T 2ew8_A           19 IGRAIAERFAVEGADIAIADLVPAPEAEA   47 (249)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCCHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCchhHHHH
Confidence            58999999999999999999998 65543

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=94.08  E-value=0.081  Score=39.35  Aligned_cols=22  Identities=32%  Similarity=0.394  Sum_probs=20.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKN   22 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~   22 (183)
                      +|.++|+.|++.|++|++.+|+
T Consensus        27 IG~a~a~~la~~G~~V~~~~r~   48 (280)
T 3pgx_A           27 QGRSHAVRLAAEGADIIACDIC   48 (280)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECC
T ss_pred             HHHHHHHHHHHCCCEEEEEecc
Confidence            5899999999999999999983

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=94.08  E-value=0.11  Score=38.59  Aligned_cols=22  Identities=32%  Similarity=0.395  Sum_probs=20.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKN   22 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~   22 (183)
                      +|.++|+.|++.|++|++.+|+
T Consensus        25 IG~~ia~~l~~~G~~V~~~~r~   46 (278)
T 3sx2_A           25 QGRAHAVRLAADGADIIAVDLC   46 (278)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECC
T ss_pred             HHHHHHHHHHHCCCeEEEEecc
Confidence            5899999999999999999987

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=94.07  E-value=0.12  Score=39.67  Aligned_cols=78  Identities=15%  Similarity=0.116  Sum_probs=51.5

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCccc-----CCHHHHhc------cCCEEEEecCChHHHHHHhcCCc
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMA-----LSLSTLAS------GAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~------~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      +|...++.+...|. +|++.++++++.+.+.+.|....     .+..+.+.      ..|+||-++..+..+...+    
T Consensus       179 vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~----  254 (348)
T 2d8a_A          179 LGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGL----  254 (348)
T ss_dssp             HHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHH----
T ss_pred             HHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHH----
Confidence            36667777778899 99999999999888877775311     23333221      5899999998755554443    


Q ss_pred             cccccCCCCcEEEeccC
Q psy755           69 GILKHAKPGVIVIDSST   85 (183)
Q Consensus        69 ~l~~~l~~~~iiid~s~   85 (183)
                         +.++++..++..+.
T Consensus       255 ---~~l~~~G~iv~~g~  268 (348)
T 2d8a_A          255 ---QAVTPAGRVSLLGL  268 (348)
T ss_dssp             ---HHEEEEEEEEECCC
T ss_pred             ---HHHhcCCEEEEEcc
Confidence               34455556666554

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=94.07  E-value=0.074  Score=39.13  Aligned_cols=30  Identities=23%  Similarity=0.352  Sum_probs=26.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.
T Consensus        19 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   48 (262)
T 1zem_A           19 IGLATALRLAEEGTAIALLDMNREALEKAE   48 (262)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=94.04  E-value=0.096  Score=38.85  Aligned_cols=31  Identities=26%  Similarity=0.368  Sum_probs=27.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+
T Consensus        17 IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~   47 (281)
T 3m1a_A           17 FGRAIAEAAVAAGDTVIGTARRTEALDDLVA   47 (281)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGGHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5899999999999999999999988776654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=94.04  E-value=0.091  Score=38.19  Aligned_cols=30  Identities=30%  Similarity=0.501  Sum_probs=25.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|+.+++.|++.|++|++.+|++++.+.+.
T Consensus        23 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~   52 (255)
T 1fmc_A           23 IGKEIAITFATAGASVVVSDINADAANHVV   52 (255)
T ss_dssp             HHHHHHHHHHTTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            589999999999999999999988765543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=94.03  E-value=0.13  Score=37.13  Aligned_cols=74  Identities=20%  Similarity=0.333  Sum_probs=43.5

Q ss_pred             CcHHHHHHHHhCCCcEEE-EcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIV-YDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|+.+++.|++.|++|++ ++|++++.+.+.+.       +.+.  ..++.++  =+.+...++.++   +++...+.+=
T Consensus        13 iG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~-------~~~~--~~~~~~~~~D~~~~~~~~~~~---~~~~~~~g~i   80 (244)
T 1edo_A           13 IGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQ-------IEAY--GGQAITFGGDVSKEADVEAMM---KTAIDAWGTI   80 (244)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-------HHHH--TCEEEEEECCTTSHHHHHHHH---HHHHHHSSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-------HHhc--CCcEEEEeCCCCCHHHHHHHH---HHHHHHcCCC
Confidence            589999999999999998 68998776654321       1111  1222222  233445555554   4444444444


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      +++|++...
T Consensus        81 d~li~~Ag~   89 (244)
T 1edo_A           81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            666766553

>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1

Probab=94.01  E-value=0.75  Score=29.81  Aligned_cols=86  Identities=14%  Similarity=0.139  Sum_probs=51.9

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCCh-----HH--HHHHhcCCccccccCC
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPAS-----QD--VLDAYDGSDGILKHAK   75 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~-----~~--~~~v~~~~~~l~~~l~   75 (183)
                      ..++..+.+.|++|..++.+..              +.. .+.++|.|++..|.-     ..  ++..+   +.+...+ 
T Consensus        18 ~~i~~~l~~~g~~v~~~~~~~~--------------~~~-~l~~~d~vi~g~p~y~~~~~~~~~~~~fl---~~l~~~l-   78 (137)
T 2fz5_A           18 NEIEAAVKAAGADVESVRFEDT--------------NVD-DVASKDVILLGCPAMGSEELEDSVVEPFF---TDLAPKL-   78 (137)
T ss_dssp             HHHHHHHHHTTCCEEEEETTSC--------------CHH-HHHTCSEEEEECCCBTTTBCCHHHHHHHH---HHHGGGC-
T ss_pred             HHHHHHHHhCCCeEEEEEcccC--------------CHH-HHhcCCEEEEEccccCCCCCCHHHHHHHH---HHhhhhc-
Confidence            3456666666777777764431              222 356799999999873     23  66665   5554444 


Q ss_pred             CCcEE--EeccCC-CchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIV--IDSSTV-DPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~ii--id~s~~-~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +++.+  +-+... .......+.+.+...|..+++
T Consensus        79 ~~k~~~~~~t~g~~~~~~~~~l~~~l~~~g~~~~~  113 (137)
T 2fz5_A           79 KGKKVGLFGSYGWGSGEWMDAWKQRTEDTGATVIG  113 (137)
T ss_dssp             SSCEEEEEEEESSCCSHHHHHHHHHHHHTTCEEEE
T ss_pred             CCCEEEEEEecCCCCchHHHHHHHHHHHCCCEEcC
Confidence            34432  222222 245667777888888887774

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=94.01  E-value=0.069  Score=40.78  Aligned_cols=79  Identities=14%  Similarity=0.236  Sum_probs=50.2

Q ss_pred             CcHHHHHHHHh-C-CCcEE-EEcCCchh-HHHH-HHcCCcc-cCCHHHHhc-----cCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLK-N-GHDVI-VYDKNTDA-SQTL-AKEGANM-ALSLSTLAS-----GAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~-~-g~~V~-~~~~~~~~-~~~~-~~~g~~~-~~~~~~~~~-----~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      ||..+++.|.+ . +.+++ ++|+++++ .+.+ ...|... .++.+++++     +.|+||+++|...+.+..      
T Consensus        15 iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~~h~~~a------   88 (312)
T 1nvm_B           15 IGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAHVQNE------   88 (312)
T ss_dssp             HHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHHHHHH------
T ss_pred             HHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChHHHHHHH------
Confidence            46778888855 3 44544 57999887 4444 3446643 445566643     589999999965444333      


Q ss_pred             ccccCCC--CcEEEeccCC
Q psy755           70 ILKHAKP--GVIVIDSSTV   86 (183)
Q Consensus        70 l~~~l~~--~~iiid~s~~   86 (183)
                       ...+..  |+.|++.+..
T Consensus        89 -~~al~a~~Gk~Vi~ekp~  106 (312)
T 1nvm_B           89 -ALLRQAKPGIRLIDLTPA  106 (312)
T ss_dssp             -HHHHHHCTTCEEEECSTT
T ss_pred             -HHHHHhCCCCEEEEcCcc
Confidence             233445  8999887654

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=93.99  E-value=0.093  Score=39.03  Aligned_cols=30  Identities=20%  Similarity=0.376  Sum_probs=26.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      ||.++|+.|++.|++|++.+|++++.+.+.
T Consensus        45 IG~aia~~la~~G~~V~~~~r~~~~~~~~~   74 (275)
T 4imr_A           45 IGAAIAEGLAGAGAHVILHGVKPGSTAAVQ   74 (275)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSTTTTHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            589999999999999999999988766554

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=93.99  E-value=0.12  Score=38.00  Aligned_cols=70  Identities=23%  Similarity=0.295  Sum_probs=43.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH-HcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA-KEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||.++|+.|++.|++|++.+|++++..... +.+             ...+..=+.+...++.++   +.+...+.+=++
T Consensus        39 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iD~  102 (260)
T 3gem_A           39 VGLHCALRLLEHGHRVIISYRTEHASVTELRQAG-------------AVALYGDFSCETGIMAFI---DLLKTQTSSLRA  102 (260)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT-------------CEEEECCTTSHHHHHHHH---HHHHHHCSCCSE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC-------------CeEEECCCCCHHHHHHHH---HHHHHhcCCCCE
Confidence            589999999999999999999987643322 112             222333344555565555   555444444466


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      +|++...
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            6666553

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=93.98  E-value=0.093  Score=38.08  Aligned_cols=75  Identities=15%  Similarity=0.278  Sum_probs=44.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|..+++.|++.|++|++.+|++++.+...+.-.    ..    .....+-.=+.+...++.++   +++...+.+=.+|
T Consensus        18 iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~----~~~~~~~~D~~~~~~~~~~~---~~~~~~~~~id~l   86 (251)
T 1zk4_A           18 IGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVG----TP----DQIQFFQHDSSDEDGWTKLF---DATEKAFGPVSTL   86 (251)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----CT----TTEEEEECCTTCHHHHHHHH---HHHHHHHSSCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----cc----CceEEEECCCCCHHHHHHHH---HHHHHHhCCCCEE
Confidence            5899999999999999999999887665443200    00    11222222334445555554   4444444344566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |++...
T Consensus        87 i~~Ag~   92 (251)
T 1zk4_A           87 VNNAGI   92 (251)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            666543

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=93.96  E-value=0.032  Score=43.11  Aligned_cols=81  Identities=15%  Similarity=0.197  Sum_probs=47.9

Q ss_pred             CcHHHHHHHHhC-CCcEEEE-cCCc--hh---HHHHHH--cC---CcccC--CHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKN-GHDVIVY-DKNT--DA---SQTLAK--EG---ANMAL--SLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~~-~~~~--~~---~~~~~~--~g---~~~~~--~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      +|+.+.+.|.++ .+++... .+++  ..   +.....  .+   ....+  +..++++++|+||+|+|.....+.+   
T Consensus        16 vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~p~~~s~~~~---   92 (337)
T 3dr3_A           16 AGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLA---   92 (337)
T ss_dssp             HHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECSCHHHHHHHH---
T ss_pred             HHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECCChHHHHHHH---
Confidence            378888888875 4477655 3331  21   222110  12   12222  3445448999999999876543333   


Q ss_pred             CccccccCCCCcEEEeccCCCc
Q psy755           67 SDGILKHAKPGVIVIDSSTVDP   88 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~~~~   88 (183)
                       +   .++..|..+||.|+...
T Consensus        93 -~---~~~~~g~~vIDlSa~fR  110 (337)
T 3dr3_A           93 -P---QFLEAGCVVFDLSGAFR  110 (337)
T ss_dssp             -H---HHHHTTCEEEECSSTTS
T ss_pred             -H---HHHHCCCEEEEcCCccc
Confidence             2   34568999999998753

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=93.95  E-value=0.083  Score=38.87  Aligned_cols=75  Identities=16%  Similarity=0.189  Sum_probs=46.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.       +.+ ....++.++  =+.+...++.++   +++...+.+=+
T Consensus        35 IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~Dl~~~~~v~~~~---~~~~~~~g~id  103 (266)
T 3o38_A           35 IGSTTARRALLEGADVVISDYHERRLGETRDQ-------LAD-LGLGRVEAVVCDVTSTEAVDALI---TQTVEKAGRLD  103 (266)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHT-TCSSCEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH-------HHh-cCCCceEEEEeCCCCHHHHHHHH---HHHHHHhCCCc
Confidence            58899999999999999999999877665432       000 011233333  334555566655   45544444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus       104 ~li~~Ag~  111 (266)
T 3o38_A          104 VLVNNAGL  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            77776654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=93.95  E-value=0.11  Score=38.32  Aligned_cols=31  Identities=23%  Similarity=0.416  Sum_probs=26.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.+
T Consensus        19 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   49 (260)
T 1nff_A           19 MGASHVRAMVAEGAKVVFGDILDEEGKAMAA   49 (260)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            5899999999999999999999887765543

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=93.93  E-value=0.098  Score=38.87  Aligned_cols=74  Identities=20%  Similarity=0.289  Sum_probs=45.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.++++.|++.|++|++.+|+.++.+...+.       +.+. ...++.++.  +.+...++.++   +.+...+.+=+
T Consensus        39 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~-~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id  107 (277)
T 4fc7_A           39 IGFRIAEIFMRHGCHTVIASRSLPRVLTAARK-------LAGA-TGRRCLPLSMDVRAPPAVMAAV---DQALKEFGRID  107 (277)
T ss_dssp             HHHHHHHHHHTTTCEEEEEESCHHHHHHHHHH-------HHHH-HSSCEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHHh-cCCcEEEEEcCCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999998876654321       1110 122333333  34445555555   44544444446


Q ss_pred             EEEeccC
Q psy755           79 IVIDSST   85 (183)
Q Consensus        79 iiid~s~   85 (183)
                      ++|++..
T Consensus       108 ~lv~nAg  114 (277)
T 4fc7_A          108 ILINCAA  114 (277)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            6777665

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=93.93  E-value=0.11  Score=38.40  Aligned_cols=29  Identities=24%  Similarity=0.433  Sum_probs=25.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|+++++.|++.|++|++.+|++++.+..
T Consensus        33 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~   61 (267)
T 1vl8_A           33 LGFGIAQGLAEAGCSVVVASRNLEEASEA   61 (267)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            58999999999999999999998876554

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=93.93  E-value=0.13  Score=41.06  Aligned_cols=79  Identities=14%  Similarity=0.254  Sum_probs=53.2

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHH-----H-HHHc--C---CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQ-----T-LAKE--G---ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~-----~-~~~~--g---~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ..|+..|.+.|.+|.+||..-+..+     + +...  +   ....+++.++++++|+|++++..++ .+.+    .  .
T Consensus       336 ~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~vi~~~~~~-~~~~----~--~  408 (436)
T 1mv8_A          336 VELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASSDVLVLGNGDEL-FVDL----V--N  408 (436)
T ss_dssp             HHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHCSEEEECSCCGG-GHHH----H--H
T ss_pred             HHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCCcEEEEeCCcHH-HHhh----h--H
Confidence            4678899999999999996533221     1 1100  0   1456788889999999999998854 4443    2  1


Q ss_pred             ccCCCCcEEEeccCCCch
Q psy755           72 KHAKPGVIVIDSSTVDPQ   89 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~   89 (183)
                      . +.++.+|+|.-+....
T Consensus       409 ~-~~~~~~i~D~r~~~~~  425 (436)
T 1mv8_A          409 K-TPSGKKLVDLVGFMPH  425 (436)
T ss_dssp             S-CCTTCEEEESSSCCSS
T ss_pred             H-hcCCCEEEECCCCCCc
Confidence            2 2346789999987643

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=93.92  E-value=0.16  Score=39.08  Aligned_cols=78  Identities=12%  Similarity=0.113  Sum_probs=52.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc------cCCHHHHhc-----cCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM------ALSLSTLAS-----GAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~-----~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      +|..+++.++..|.+|++.++++++.+.+.+.|...      .++..+.+.     ..|+||.++..+..++..+     
T Consensus       182 iG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~-----  256 (347)
T 2hcy_A          182 LGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEAST-----  256 (347)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHT-----
T ss_pred             HHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHH-----
Confidence            467788888889999999999999888777766421      123333332     4899999997655554443     


Q ss_pred             ccccCCCCcEEEeccC
Q psy755           70 ILKHAKPGVIVIDSST   85 (183)
Q Consensus        70 l~~~l~~~~iiid~s~   85 (183)
                        +.++++..++..+.
T Consensus       257 --~~l~~~G~iv~~g~  270 (347)
T 2hcy_A          257 --RYVRANGTTVLVGM  270 (347)
T ss_dssp             --TSEEEEEEEEECCC
T ss_pred             --HHHhcCCEEEEEeC
Confidence              34455555555554

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=93.88  E-value=0.058  Score=41.90  Aligned_cols=79  Identities=10%  Similarity=0.156  Sum_probs=46.3

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCch----hHHHHHH-----------cCCccc-CCHHHHhc-cCCEEEEecCChHHHHH
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTD----ASQTLAK-----------EGANMA-LSLSTLAS-GAEFIISMLPASQDVLD   62 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~----~~~~~~~-----------~g~~~~-~~~~~~~~-~adiVi~~vp~~~~~~~   62 (183)
                      +|+.+.+.|.+++ ++|+...+++.    .+.....           ...... .+++++.+ ++|+||+|+|.....+.
T Consensus        20 iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~atp~~~~~~~   99 (354)
T 1ys4_A           20 VGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVFSALPSDLAKKF   99 (354)
T ss_dssp             HHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEEECCCHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEEECCCchHHHHH
Confidence            4778888888765 47776643321    1221100           011111 14455556 89999999987554333


Q ss_pred             HhcCCccccccCCCCcEEEeccCC
Q psy755           63 AYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        63 v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      +    +   .++..|..|||.++.
T Consensus       100 a----~---~~~~aG~~VId~s~~  116 (354)
T 1ys4_A          100 E----P---EFAKEGKLIFSNASA  116 (354)
T ss_dssp             H----H---HHHHTTCEEEECCST
T ss_pred             H----H---HHHHCCCEEEECCch
Confidence            2    2   344578889999976

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=93.88  E-value=0.099  Score=39.37  Aligned_cols=30  Identities=23%  Similarity=0.330  Sum_probs=26.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+...
T Consensus        38 IG~aia~~L~~~G~~V~~~~r~~~~~~~~~   67 (297)
T 1xhl_A           38 IGRSAAVIFAKEGAQVTITGRNEDRLEETK   67 (297)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1

Probab=93.87  E-value=0.2  Score=38.68  Aligned_cols=79  Identities=13%  Similarity=0.164  Sum_probs=47.1

Q ss_pred             CcHHHHHHHHhCC-CcEE-EEcCCchhHHHHHHc-CCcc-----------------cCCHHHHhccCCEEEEecCChHHH
Q psy755            1 MGSHMARNLLKNG-HDVI-VYDKNTDASQTLAKE-GANM-----------------ALSLSTLASGAEFIISMLPASQDV   60 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~-~~~~~~~~~~~~~~~-g~~~-----------------~~~~~~~~~~adiVi~~vp~~~~~   60 (183)
                      ||+.+++.|.++. .+++ +.|++++........ ++..                 .++.++...++|+||.|+|.....
T Consensus        12 iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~   91 (340)
T 1b7g_O           12 IGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVVDTTPNGVGA   91 (340)
T ss_dssp             HHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEEECCSTTHHH
T ss_pred             HHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEEEECCCCchhH
Confidence            5788888887664 4665 468887654443332 3322                 223445556799999999986543


Q ss_pred             HHHhcCCccccccCCCCcEEEeccCC
Q psy755           61 LDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        61 ~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      +..       ..++..|..+++.|..
T Consensus        92 ~~a-------~~~~~aG~kvV~~sa~  110 (340)
T 1b7g_O           92 QYK-------PIYLQLQRNAIFQGGE  110 (340)
T ss_dssp             HHH-------HHHHHTTCEEEECTTS
T ss_pred             HHH-------HHHHHcCCeEEEeCCC
Confidence            332       2234456666666654

>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}

Probab=93.86  E-value=0.68  Score=31.40  Aligned_cols=117  Identities=20%  Similarity=0.135  Sum_probs=67.5

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChH---HHHHHhcCCccccccCCCCc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQ---DVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~---~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ...|+..|.+.|.+|.++|.+....+.           +.+.+.++|.|++..|.-.   +.+..+   +.+.....+++
T Consensus        18 A~~ia~~l~~~g~~v~~~~~~~~~~~~-----------~~~~~~~~d~ii~Gspty~g~~p~~~fl---~~l~~~~l~gk   83 (161)
T 3hly_A           18 SQAIGRGLVKTGVAVEMVDLRAVDPQE-----------LIEAVSSARGIVLGTPPSQPSEAVATAL---STIFAAAHNKQ   83 (161)
T ss_dssp             HHHHHHHHHHTTCCEEEEETTTCCHHH-----------HHHHHHHCSEEEEECCBSSCCHHHHHHH---HHHHHHCCTTS
T ss_pred             HHHHHHHHHhCCCeEEEEECCCCCHHH-----------HHHHHHhCCEEEEEcCCcCCchhHHHHH---HHHHhhhhCCC
Confidence            356777777778888888765432221           1223457999999998531   112333   44443323566


Q ss_pred             EEEeccC--CCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhc
Q psy755           79 IVIDSST--VDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus        79 iiid~s~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g  144 (183)
                      .+.-.++  ........+.+.+...|+..+..++..      .+      ..+++..++++++.+.+.
T Consensus        84 ~v~~fgs~g~~g~a~~~l~~~l~~~G~~~v~~~~~~------~~------~P~~~dl~~~~~~g~~la  139 (161)
T 3hly_A           84 AIGLFDSYGGDDEPIDALLAQFRNLGLHTAFPPIRV------KD------QPTEAIYQQCEESGTDLG  139 (161)
T ss_dssp             EEEEECCCCSSBCCHHHHHHHHHHTTCEESSSCBCC------CS------SCCHHHHHHHHHHHHHHH
T ss_pred             EEEEEEcCCCCcHHHHHHHHHHHHCCCEEecCceEE------ee------CCCHHHHHHHHHHHHHHH
Confidence            5543333  234567788888888898877543221      01      125666667766666554

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=93.81  E-value=0.01  Score=44.18  Aligned_cols=25  Identities=24%  Similarity=0.363  Sum_probs=22.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA   25 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~   25 (183)
                      +|.++|+.|++.|++|++.+|+.++
T Consensus        18 IG~aia~~la~~G~~V~~~~r~~~~   42 (274)
T 3e03_A           18 IGLAIALRAARDGANVAIAAKSAVA   42 (274)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCCSC
T ss_pred             HHHHHHHHHHHCCCEEEEEeccchh
Confidence            5899999999999999999999865

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=93.79  E-value=0.23  Score=38.06  Aligned_cols=78  Identities=13%  Similarity=0.176  Sum_probs=52.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc-----CCHHHHh----ccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA-----LSLSTLA----SGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~----~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      +|...++.+...|.+|++.++++++.+.+.+.|....     .+..+.+    ...|+||-++..+..++..+       
T Consensus       176 vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~-------  248 (339)
T 1rjw_A          176 LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAY-------  248 (339)
T ss_dssp             THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHH-------
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHHHHHHH-------
Confidence            5777788888889999999999999988887775321     1222222    46899999997655554443       


Q ss_pred             ccCCCCcEEEeccC
Q psy755           72 KHAKPGVIVIDSST   85 (183)
Q Consensus        72 ~~l~~~~iiid~s~   85 (183)
                      +.++++..++..+.
T Consensus       249 ~~l~~~G~~v~~g~  262 (339)
T 1rjw_A          249 NSIRRGGACVLVGL  262 (339)
T ss_dssp             HHEEEEEEEEECCC
T ss_pred             HHhhcCCEEEEecc
Confidence            34445555555543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=93.78  E-value=0.07  Score=39.06  Aligned_cols=30  Identities=37%  Similarity=0.453  Sum_probs=26.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.
T Consensus        18 iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   47 (253)
T 1hxh_A           18 VGLEVVKLLLGEGAKVAFSDINEAAGQQLA   47 (253)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766554

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=93.75  E-value=0.15  Score=38.22  Aligned_cols=76  Identities=4%  Similarity=-0.019  Sum_probs=44.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++.+|+++..+.+.+.        .+.......+-.=+.+...++.++   +.+.....+=.++
T Consensus        45 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~iD~l  113 (293)
T 3grk_A           45 IAWGIAKAAREAGAELAFTYQGDALKKRVEPL--------AEELGAFVAGHCDVADAASIDAVF---ETLEKKWGKLDFL  113 (293)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH--------HHHHTCEEEEECCTTCHHHHHHHH---HHHHHHTSCCSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--------HHhcCCceEEECCCCCHHHHHHHH---HHHHHhcCCCCEE
Confidence            58899999999999999999996543332211        111111122222234555666665   5555555555677


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      |++....
T Consensus       114 VnnAG~~  120 (293)
T 3grk_A          114 VHAIGFS  120 (293)
T ss_dssp             EECCCCC
T ss_pred             EECCccC
Confidence            7776654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=93.73  E-value=0.037  Score=41.05  Aligned_cols=28  Identities=18%  Similarity=0.519  Sum_probs=24.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQT   28 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~   28 (183)
                      ||.++++.|++.|++|++.+|+.++.+.
T Consensus        28 IG~aia~~l~~~G~~V~~~~r~~~~~~~   55 (266)
T 3p19_A           28 IGEAIARRFSEEGHPLLLLARRVERLKA   55 (266)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESCHHHHHT
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            5899999999999999999999876553

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=93.72  E-value=0.11  Score=38.22  Aligned_cols=73  Identities=14%  Similarity=0.284  Sum_probs=44.6

Q ss_pred             CcHHHHHHHHhCCCcEEEE-cCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVY-DKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++++.|++.|++|++. +|++++.+...+.       +.+  ...++.++  =+.+...++.++   +.+...+.+=
T Consensus        16 IG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~i   83 (258)
T 3oid_A           16 VGKAAAIRLAENGYNIVINYARSKKAALETAEE-------IEK--LGVKVLVVKANVGQPAKIKEMF---QQIDETFGRL   83 (258)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-------HHT--TTCCEEEEECCTTCHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-------HHh--cCCcEEEEEcCCCCHHHHHHHH---HHHHHHcCCC
Confidence            5899999999999999885 9998876665432       000  01233333  234555566655   4554444444


Q ss_pred             cEEEeccC
Q psy755           78 VIVIDSST   85 (183)
Q Consensus        78 ~iiid~s~   85 (183)
                      .++|++..
T Consensus        84 d~lv~nAg   91 (258)
T 3oid_A           84 DVFVNNAA   91 (258)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            66776654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=93.71  E-value=0.11  Score=39.50  Aligned_cols=76  Identities=22%  Similarity=0.273  Sum_probs=45.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+.       +...-.+.++.++  =+.+...++.++   +.+.....+=.
T Consensus        20 IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dl~~~~~v~~~~---~~~~~~~g~id   89 (319)
T 3ioy_A           20 VGIGLVRQLLNQGCKVAIADIRQDSIDKALAT-------LEAEGSGPEVMGVQLDVASREGFKMAA---DEVEARFGPVS   89 (319)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHHTCGGGEEEEECCTTCHHHHHHHH---HHHHHHTCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhcCCCCeEEEEECCCCCHHHHHHHH---HHHHHhCCCCC
Confidence            58999999999999999999999887765432       1111011123332  234445555555   44444443335


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++.+.
T Consensus        90 ~lv~nAg~   97 (319)
T 3ioy_A           90 ILCNNAGV   97 (319)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            66666653

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=93.70  E-value=0.014  Score=41.80  Aligned_cols=57  Identities=9%  Similarity=0.172  Sum_probs=39.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc---CCccc---CCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE---GANMA---LSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~---g~~~~---~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|+.+++.|++.|++|++.+|++++.+.....   .....   +++.++++++|+||.+....
T Consensus        12 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~   74 (219)
T 3dqp_A           12 VGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSG   74 (219)
T ss_dssp             HHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCT
T ss_pred             HHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCC
Confidence            48999999999999999999998765432110   01112   23445577899999988643

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=93.67  E-value=0.12  Score=38.25  Aligned_cols=22  Identities=27%  Similarity=0.380  Sum_probs=20.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKN   22 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~   22 (183)
                      ||.++|+.|++.|++|++.+|+
T Consensus        23 IG~a~a~~la~~G~~V~~~~r~   44 (277)
T 3tsc_A           23 QGRAHAVRMAAEGADIIAVDIA   44 (277)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECC
T ss_pred             HHHHHHHHHHHcCCEEEEEecc
Confidence            5899999999999999999883

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=93.64  E-value=0.13  Score=38.02  Aligned_cols=30  Identities=30%  Similarity=0.457  Sum_probs=25.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcC-CchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDK-NTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~-~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+| ++++.+.+.
T Consensus        23 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   53 (276)
T 1mxh_A           23 IGHSIAVRLHQQGFRVVVHYRHSEGAAQRLV   53 (276)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCChHHHHHHH
Confidence            589999999999999999999 877766543

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=93.62  E-value=0.13  Score=38.77  Aligned_cols=22  Identities=32%  Similarity=0.440  Sum_probs=20.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKN   22 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~   22 (183)
                      ||.++|+.|++.|++|++.+|+
T Consensus        40 IG~aia~~la~~G~~V~~~~~~   61 (299)
T 3t7c_A           40 QGRSHAITLAREGADIIAIDVC   61 (299)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECC
T ss_pred             HHHHHHHHHHHCCCEEEEEecc
Confidence            5899999999999999999987

>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10

Probab=93.61  E-value=1.1  Score=34.73  Aligned_cols=118  Identities=14%  Similarity=0.079  Sum_probs=73.4

Q ss_pred             CCcccCCHHHHhc-cCCEEEEec-CChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeec-
Q psy755           33 GANMALSLSTLAS-GAEFIISML-PASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAP-  109 (183)
Q Consensus        33 g~~~~~~~~~~~~-~adiVi~~v-p~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~-  109 (183)
                      |+....+++++++ .+|++++.+ |..-.+...++  +.+...+..|.-|++.....-.+...+.+..++.|..+++.. 
T Consensus        75 gipv~~d~~~al~~~~d~lvig~a~~gg~l~~~~~--~~I~~Al~~G~nVvsglh~~l~~~pel~~~A~~~Gv~i~dvr~  152 (350)
T 2g0t_A           75 DVPVVSSVEKAKEMGAEVLIIGVSNPGGYLEEQIA--TLVKKALSLGMDVISGLHFKISQQTEFLKIAHENGTRIIDIRI  152 (350)
T ss_dssp             CCBEESSHHHHHHTTCCEEEECCCSCCHHHHHHHH--HHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHTCCEEESSS
T ss_pred             CceeeCCHHHHHhcCCCEEEEEecCCCCCCCHHHH--HHHHHHHHcCCcEEeCChhhhhCCHHHHHHHHHCCCEEEEeCc
Confidence            5677779998875 799999987 44444443332  677888999999998777666666677777777788888832 


Q ss_pred             ------ccCCHHHHhcCceEEEecCCH-----HHHHHHHHHHHHhcCCeEEeCC
Q psy755          110 ------VSGGTKAAQEATLTFMVGGDK-----SSLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus       110 ------~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~~l~~~~g~~~~~~g~  152 (183)
                            +..+.......+..+.+|.+.     -....+...++.-|.+..+++.
T Consensus       153 ~p~~l~v~~g~i~~i~~~ri~v~GTDt~vGKt~t~~~L~~~l~~~G~~v~~v~t  206 (350)
T 2g0t_A          153 PPLELDVLRGGIYRKKIKVVGVFGTDCVVGKRTTAVQLWERALEKGIKAGFLAT  206 (350)
T ss_dssp             CCSSCCCCCSGGGGCCSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CCCcccccccceeeecceEEEEecCCCCccCccHHHHHHHHHHhcCCeEEEEcc
Confidence                  221221111233345555332     2234455667777877766553

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=93.61  E-value=0.1  Score=37.88  Aligned_cols=29  Identities=17%  Similarity=0.214  Sum_probs=24.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCC-chhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKN-TDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~-~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+|+ +++.+.+
T Consensus        19 iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   48 (258)
T 3afn_B           19 IGLATARLFARAGAKVGLHGRKAPANIDET   48 (258)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCCTTHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEECCCchhhHHHH
Confidence            5899999999999999999998 7666554

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=93.60  E-value=0.17  Score=36.55  Aligned_cols=75  Identities=17%  Similarity=0.300  Sum_probs=44.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.+.       +.+. ...++.++.  +.+...++..+   +++...+.+=.
T Consensus        19 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~-~~~~~~~~~~D~~~~~~~~~~~---~~~~~~~~~~d   87 (248)
T 2pnf_A           19 IGRAIAEKLASAGSTVIITGTSGERAKAVAEE-------IANK-YGVKAHGVEMNLLSEESINKAF---EEIYNLVDGID   87 (248)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-------HHHH-HCCCEEEEECCTTCHHHHHHHH---HHHHHHSSCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-------HHhh-cCCceEEEEccCCCHHHHHHHH---HHHHHhcCCCC
Confidence            58999999999999999999998876654321       1100 012333222  33445555554   44444444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      +|+++...
T Consensus        88 ~vi~~Ag~   95 (248)
T 2pnf_A           88 ILVNNAGI   95 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            66766653

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=93.56  E-value=0.1  Score=38.13  Aligned_cols=76  Identities=13%  Similarity=0.209  Sum_probs=45.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhcc-CCEEE--EecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASG-AEFII--SMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-adiVi--~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++|+.|++.|++|++.+|++++.+...+.       +.+.... .++.+  .=+.+...++.++   +++...+.+=
T Consensus        19 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~i   88 (250)
T 3nyw_A           19 IGAVIAAGLATDGYRVVLIARSKQNLEKVHDE-------IMRSNKHVQEPIVLPLDITDCTKADTEI---KDIHQKYGAV   88 (250)
T ss_dssp             HHHHHHHHHHHHTCEEEEEESCHHHHHHHHHH-------HHHHCTTSCCCEEEECCTTCHHHHHHHH---HHHHHHHCCE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHHhccccCcceEEeccCCCHHHHHHHH---HHHHHhcCCC
Confidence            58999999999999999999999887765432       1111001 22222  2334545555554   4444444344


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++|++...
T Consensus        89 D~lvnnAg~   97 (250)
T 3nyw_A           89 DILVNAAAM   97 (250)
T ss_dssp             EEEEECCCC
T ss_pred             CEEEECCCc
Confidence            566666554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=93.55  E-value=0.11  Score=37.60  Aligned_cols=30  Identities=23%  Similarity=0.333  Sum_probs=26.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        14 iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   43 (250)
T 2cfc_A           14 NGLAIATRFLARGDRVAALDLSAETLEETA   43 (250)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988776554

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=93.54  E-value=0.13  Score=38.14  Aligned_cols=23  Identities=30%  Similarity=0.492  Sum_probs=21.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~   23 (183)
                      +|.++|+.|++.|++|++.+|++
T Consensus        22 IG~a~a~~l~~~G~~V~~~~r~~   44 (281)
T 3s55_A           22 MGRSHAVALAEAGADIAICDRCE   44 (281)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECCS
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCc
Confidence            58999999999999999999974

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=93.53  E-value=0.16  Score=37.92  Aligned_cols=75  Identities=19%  Similarity=0.260  Sum_probs=45.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++++.|++.|++|++.+|++++.+...+.       +.+. ...++.++.  +.+...++.++   +++.....+=.
T Consensus        38 iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-------l~~~-~~~~~~~~~~Dl~~~~~~~~~~---~~~~~~~g~id  106 (302)
T 1w6u_A           38 LGKGMTTLLSSLGAQCVIASRKMDVLKATAEQ-------ISSQ-TGNKVHAIQCDVRDPDMVQNTV---SELIKVAGHPN  106 (302)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHH-HSSCEEEEECCTTCHHHHHHHH---HHHHHHTCSCS
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHHh-cCCceEEEEeCCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999998876654321       1110 022333332  33445555554   44444444446


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      +||++...
T Consensus       107 ~li~~Ag~  114 (302)
T 1w6u_A          107 IVINNAAG  114 (302)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            67776653

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=93.52  E-value=0.14  Score=39.96  Aligned_cols=78  Identities=15%  Similarity=0.204  Sum_probs=46.9

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHH-----cCC---c-ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAK-----EGA---N-MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~-----~g~---~-~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      +|+.+.+.|.++.. +++......+.-.+...     .+.   . ...+ ++..+++|+||+|+|.....+..       
T Consensus        28 iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~atp~~~s~~~a-------   99 (359)
T 1xyg_A           28 TGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCLPHGTTQEII-------   99 (359)
T ss_dssp             HHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECCCTTTHHHHH-------
T ss_pred             HHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcCCchhHHHHH-------
Confidence            47888898887764 77766433322111111     111   0 0112 33446899999999987655444       


Q ss_pred             cccCCCCcEEEeccCCC
Q psy755           71 LKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~   87 (183)
                      ..+ ..|..+||.|+..
T Consensus       100 ~~~-~aG~~VId~sa~~  115 (359)
T 1xyg_A          100 KEL-PTALKIVDLSADF  115 (359)
T ss_dssp             HTS-CTTCEEEECSSTT
T ss_pred             HHH-hCCCEEEECCccc
Confidence            234 6788999999865

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=93.52  E-value=0.01  Score=44.56  Aligned_cols=74  Identities=16%  Similarity=0.238  Sum_probs=43.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH-------HHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS-------QTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~   71 (183)
                      +|.++|+.|++.|++|++.+|++++.       +...+       .+.+.  ..++.++  =+.+...++.++   +++.
T Consensus        21 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~Dv~~~~~v~~~~---~~~~   88 (285)
T 3sc4_A           21 IGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAK-------EIEEA--GGQALPIVGDIRDGDAVAAAV---AKTV   88 (285)
T ss_dssp             HHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHH-------HHHHH--TSEEEEEECCTTSHHHHHHHH---HHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHH-------HHHhc--CCcEEEEECCCCCHHHHHHHH---HHHH
Confidence            58999999999999999999998742       22111       11111  2233333  334555566655   5554


Q ss_pred             ccCCCCcEEEeccCC
Q psy755           72 KHAKPGVIVIDSSTV   86 (183)
Q Consensus        72 ~~l~~~~iiid~s~~   86 (183)
                      ..+.+=.++|++...
T Consensus        89 ~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           89 EQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHSCCSEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence            444444667776654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=93.52  E-value=0.094  Score=39.20  Aligned_cols=56  Identities=14%  Similarity=0.243  Sum_probs=40.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc-------hhHHHH---HHcCCcc-------cCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT-------DASQTL---AKEGANM-------ALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~-------~~~~~~---~~~g~~~-------~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|.+.|++|++.+|++       ++.+.+   ...++..       .+++.++++++|+||.+.+.
T Consensus        14 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~   86 (307)
T 2gas_A           14 IGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGR   86 (307)
T ss_dssp             THHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECSSS
T ss_pred             HHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEEECCcc
Confidence            58999999999999999999987       544332   2334321       12345667899999998864

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=93.52  E-value=0.06  Score=39.90  Aligned_cols=55  Identities=24%  Similarity=0.398  Sum_probs=41.2

Q ss_pred             CcHHHHHHHHhC--CCcEEEEcCCchhHHHHHHcCCcc-------cCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKN--GHDVIVYDKNTDASQTLAKEGANM-------ALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|.+.  |++|++.+|++++.+.+...++..       .+++.++++++|+||-+..
T Consensus        12 iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A           12 LGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             HHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             HHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            488999999998  999999999988777665544321       1234456778999998765

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=93.48  E-value=0.14  Score=38.04  Aligned_cols=22  Identities=32%  Similarity=0.536  Sum_probs=20.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKN   22 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~   22 (183)
                      +|.++|+.|++.|++|++.+|+
T Consensus        22 IG~~ia~~l~~~G~~V~~~~~~   43 (287)
T 3pxx_A           22 QGRSHAVKLAEEGADIILFDIC   43 (287)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECC
T ss_pred             HHHHHHHHHHHCCCeEEEEccc
Confidence            5899999999999999999987

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=93.46  E-value=0.13  Score=38.51  Aligned_cols=56  Identities=23%  Similarity=0.333  Sum_probs=39.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc-----hhHHHH---HHcCCcc-------cCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT-----DASQTL---AKEGANM-------ALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~-----~~~~~~---~~~g~~~-------~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|.+.|++|++.+|++     ++.+.+   ...++..       .+++.++++++|+||.+...
T Consensus        16 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   86 (313)
T 1qyd_A           16 IGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISALAG   86 (313)
T ss_dssp             THHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECCCC
T ss_pred             HHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEECCcc
Confidence            58999999999999999999984     343332   2234321       12345667899999998864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=93.46  E-value=0.2  Score=36.91  Aligned_cols=30  Identities=17%  Similarity=0.436  Sum_probs=26.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+...
T Consensus        22 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~   51 (267)
T 3t4x_A           22 IGKAIATSLVAEGANVLINGRREENVNETI   51 (267)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999998766544

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=93.41  E-value=0.14  Score=37.48  Aligned_cols=29  Identities=21%  Similarity=0.361  Sum_probs=25.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh-HHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA-SQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~-~~~~   29 (183)
                      +|+++++.|++.|++|++.+|++++ .+.+
T Consensus        16 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   45 (260)
T 1x1t_A           16 IGLGIATALAAQGADIVLNGFGDAAEIEKV   45 (260)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCSCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCcchHHHHH
Confidence            5899999999999999999999876 5544

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=93.36  E-value=0.37  Score=35.32  Aligned_cols=73  Identities=8%  Similarity=0.041  Sum_probs=43.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch---hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD---ASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++++.|++.|++|++.+|++.   ..+.+.+..           .....+..=+.+...++.++   +.+...+.+=
T Consensus        23 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-----------~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~i   88 (265)
T 1qsg_A           23 IAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL-----------GSDIVLQCDVAEDASIDTMF---AELGKVWPKF   88 (265)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT-----------TCCCEEECCTTCHHHHHHHH---HHHHTTCSSE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhc-----------CCcEEEEccCCCHHHHHHHH---HHHHHHcCCC
Confidence            588999999999999999999872   222222111           11223333344556666665   5554444344


Q ss_pred             cEEEeccCCC
Q psy755           78 VIVIDSSTVD   87 (183)
Q Consensus        78 ~iiid~s~~~   87 (183)
                      .++|++....
T Consensus        89 D~lv~~Ag~~   98 (265)
T 1qsg_A           89 DGFVHSIGFA   98 (265)
T ss_dssp             EEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            6677776543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=93.33  E-value=0.058  Score=39.90  Aligned_cols=55  Identities=20%  Similarity=0.398  Sum_probs=40.6

Q ss_pred             CcHHHHHHHHhC--CCcEEEEcCCchhHHHHHHcCCcc-------cCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKN--GHDVIVYDKNTDASQTLAKEGANM-------ALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|.+.  |++|++.+|++++.+.+...++..       .+++.++++++|+||-+..
T Consensus        11 iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   74 (286)
T 2zcu_A           11 LGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS   74 (286)
T ss_dssp             HHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred             HHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence            488999999998  999999999988776665544321       1234456778999998764

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=93.33  E-value=0.13  Score=38.26  Aligned_cols=22  Identities=32%  Similarity=0.413  Sum_probs=20.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKN   22 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~   22 (183)
                      ||.++|+.|++.|++|++.+|+
T Consensus        23 IG~aia~~la~~G~~V~~~~~~   44 (286)
T 3uve_A           23 QGRSHAVRLAQEGADIIAVDIC   44 (286)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECC
T ss_pred             HHHHHHHHHHHCCCeEEEEecc
Confidence            5899999999999999999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=93.28  E-value=0.1  Score=38.23  Aligned_cols=29  Identities=21%  Similarity=0.389  Sum_probs=24.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh--HHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA--SQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~--~~~~   29 (183)
                      +|+++++.|++.|++|++.+|++++  .+..
T Consensus        14 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   44 (258)
T 3a28_C           14 IGRGISEKLAADGFDIAVADLPQQEEQAAET   44 (258)
T ss_dssp             HHHHHHHHHHHHTCEEEEEECGGGHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCcchHHHHHH
Confidence            5899999999999999999999876  5443

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=93.22  E-value=0.15  Score=37.39  Aligned_cols=30  Identities=27%  Similarity=0.419  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.
T Consensus        17 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   46 (260)
T 2qq5_A           17 IGRGIALQLCKAGATVYITGRHLDTLRVVA   46 (260)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=93.22  E-value=0.14  Score=37.53  Aligned_cols=30  Identities=10%  Similarity=0.124  Sum_probs=25.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|+.+++.|++.|++|++.+|++++.+...
T Consensus        26 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~   55 (266)
T 1xq1_A           26 IGHAIVEEFAGFGAVIHTCARNEYELNECL   55 (266)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=93.22  E-value=0.1  Score=38.58  Aligned_cols=54  Identities=19%  Similarity=0.271  Sum_probs=41.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc----cCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM----ALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|.+.|++|++.+|++++.+.+...++..    ..++.  +.++|+||-+...
T Consensus        16 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~   73 (286)
T 3ius_A           16 TARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAP   73 (286)
T ss_dssp             HHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCc
Confidence            489999999999999999999999887776655321    11222  6789999998854

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=93.21  E-value=0.15  Score=38.39  Aligned_cols=56  Identities=21%  Similarity=0.375  Sum_probs=39.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc------hhHHHH---HHcCCcc-------cCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT------DASQTL---AKEGANM-------ALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~------~~~~~~---~~~g~~~-------~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|++.|++|++.+|++      ++.+.+   ...++..       .+++.++++++|+||.+...
T Consensus        16 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~~a~~   87 (321)
T 3c1o_A           16 IGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVISALPF   87 (321)
T ss_dssp             THHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             hHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence            58999999999999999999986      233322   2334321       12345677899999998864

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=93.19  E-value=0.14  Score=37.70  Aligned_cols=23  Identities=22%  Similarity=0.403  Sum_probs=20.5

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCc
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNT   23 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~   23 (183)
                      +|..++..|++.|. +++++|++.
T Consensus        42 ~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           42 LGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             HHHHHHHHHHHcCCCeEEEEcCCC
Confidence            47899999999998 899999987

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=93.18  E-value=0.23  Score=36.40  Aligned_cols=30  Identities=23%  Similarity=0.471  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.
T Consensus        19 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   48 (260)
T 2z1n_A           19 LGFASALELARNGARLLLFSRNREKLEAAA   48 (260)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=93.17  E-value=0.11  Score=38.60  Aligned_cols=31  Identities=26%  Similarity=0.474  Sum_probs=27.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|.++|+.|++.|++|++.+|++++.+.+.+
T Consensus        42 IG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~   72 (281)
T 3ppi_A           42 LGEATVRRLHADGLGVVIADLAAEKGKALAD   72 (281)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence            5899999999999999999999988776544

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=93.15  E-value=0.17  Score=37.02  Aligned_cols=28  Identities=18%  Similarity=0.402  Sum_probs=24.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      +|.++++.|++.|++|++.+|++++ +..
T Consensus        18 IG~~ia~~l~~~G~~V~~~~r~~~~-~~~   45 (256)
T 2d1y_A           18 IGRAIAQAFAREGALVALCDLRPEG-KEV   45 (256)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSTTH-HHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChhH-HHH
Confidence            5899999999999999999999877 443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=93.14  E-value=0.13  Score=37.70  Aligned_cols=30  Identities=20%  Similarity=0.361  Sum_probs=25.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+...
T Consensus        24 iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   53 (265)
T 2o23_A           24 LGLATAERLVGQGASAVLLDLPNSGGEAQA   53 (265)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECTTSSHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCcHhHHHHH
Confidence            589999999999999999999988766544

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=93.13  E-value=0.14  Score=38.17  Aligned_cols=56  Identities=27%  Similarity=0.440  Sum_probs=38.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch------hHHHH---HHcCCcc----c---CCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD------ASQTL---AKEGANM----A---LSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~------~~~~~---~~~g~~~----~---~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|.+.|++|++.+|++.      +.+.+   ...++..    .   +++.++++++|+||.+.+.
T Consensus        16 iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~~a~~   87 (308)
T 1qyc_A           16 IGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVISTVGS   87 (308)
T ss_dssp             THHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEECCCG
T ss_pred             HHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEECCcc
Confidence            589999999999999999999843      32222   2234321    1   2345567889999999864

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=93.11  E-value=0.17  Score=38.14  Aligned_cols=56  Identities=27%  Similarity=0.423  Sum_probs=40.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch-hHHH---HHHcCCcc-------cCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD-ASQT---LAKEGANM-------ALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~-~~~~---~~~~g~~~-------~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|.+.|++|++.+|+++ +.+.   +...++..       .+++.++++++|+||.+.+.
T Consensus        23 iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~   89 (318)
T 2r6j_A           23 IGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF   89 (318)
T ss_dssp             THHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred             HHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence            589999999999999999999875 3332   23334321       12345667899999998864

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=93.10  E-value=0.18  Score=37.06  Aligned_cols=77  Identities=8%  Similarity=0.105  Sum_probs=44.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++.+|+....+.+.+...... .     .+...+..=+.+...++.++   +++.....+=.++
T Consensus        21 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~-----~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~id~l   91 (266)
T 3oig_A           21 IAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD-R-----NDSIILPCDVTNDAEIETCF---ASIKEQVGVIHGI   91 (266)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS-S-----CCCEEEECCCSSSHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC-C-----CCceEEeCCCCCHHHHHHHH---HHHHHHhCCeeEE
Confidence            5889999999999999999998765444332100000 0     02233333344556666665   5555444444566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      +++...
T Consensus        92 i~~Ag~   97 (266)
T 3oig_A           92 AHCIAF   97 (266)
T ss_dssp             EECCCC
T ss_pred             EEcccc
Confidence            766554

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=93.10  E-value=0.16  Score=36.88  Aligned_cols=30  Identities=23%  Similarity=0.438  Sum_probs=26.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|+.+++.|++.|++|++.+|++++.+.+.
T Consensus        23 iG~~la~~l~~~G~~V~~~~r~~~~~~~~~   52 (254)
T 2wsb_A           23 IGLEICRAFAASGARLILIDREAAALDRAA   52 (254)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=93.08  E-value=0.15  Score=37.35  Aligned_cols=76  Identities=14%  Similarity=0.191  Sum_probs=44.2

Q ss_pred             CcHHHHHHHHh-CCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLK-NGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~-~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +|..+++.|++ .|++|++.+|++++.+...+.       +.+.-....++..=+.+...++.++   +.+...+.+=.+
T Consensus        16 IG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~Dl~~~~~~~~~~---~~~~~~~g~id~   85 (276)
T 1wma_A           16 IGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQ-------LQAEGLSPRFHQLDIDDLQSIRALR---DFLRKEYGGLDV   85 (276)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHH-------HHHTTCCCEEEECCTTCHHHHHHHH---HHHHHHHSSEEE
T ss_pred             HHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHH-------HHhcCCeeEEEECCCCCHHHHHHHH---HHHHHhcCCCCE
Confidence            58999999999 999999999998776554321       1110012223333334445555554   444433333356


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      ||++...
T Consensus        86 li~~Ag~   92 (276)
T 1wma_A           86 LVNNAGI   92 (276)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            6776654

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=93.06  E-value=0.47  Score=36.87  Aligned_cols=77  Identities=16%  Similarity=0.183  Sum_probs=50.4

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcc-------cCCHHHHhc-----cCCEEEEecCChHHHHHHhcCCc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANM-------ALSLSTLAS-----GAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~-----~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      |...++.+...|. +|++.++++++.+.+.+.|...       ..+..+.+.     ..|+||-++..+..+...+    
T Consensus       206 G~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~----  281 (378)
T 3uko_A          206 GLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAAL----  281 (378)
T ss_dssp             HHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHH----
T ss_pred             HHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHH----
Confidence            4555555666788 7999999999999888877532       123333332     4899999998765555443    


Q ss_pred             cccccCCCC-cEEEeccC
Q psy755           69 GILKHAKPG-VIVIDSST   85 (183)
Q Consensus        69 ~l~~~l~~~-~iiid~s~   85 (183)
                         ..++++ ..++..+.
T Consensus       282 ---~~l~~g~G~iv~~G~  296 (378)
T 3uko_A          282 ---ECCHKGWGTSVIVGV  296 (378)
T ss_dssp             ---HTBCTTTCEEEECSC
T ss_pred             ---HHhhccCCEEEEEcc
Confidence               455664 55555543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=93.04  E-value=0.16  Score=37.08  Aligned_cols=29  Identities=21%  Similarity=0.383  Sum_probs=24.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcC-CchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDK-NTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~-~~~~~~~~   29 (183)
                      +|..+++.|++.|++|++.+| ++++.+.+
T Consensus        19 iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~   48 (261)
T 1gee_A           19 LGKSMAIRFATEKAKVVVNYRSKEDEANSV   48 (261)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence            589999999999999999999 76665544

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=93.02  E-value=0.16  Score=37.30  Aligned_cols=79  Identities=20%  Similarity=0.250  Sum_probs=45.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+++++.|++.|++|++.+|++++.+...+.-.... ..    .....+..=+.+...++.++   +.+...+.+=+++
T Consensus        19 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~----~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~id~l   90 (267)
T 2gdz_A           19 IGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF-EP----QKTLFIQCDVADQQQLRDTF---RKVVDHFGRLDIL   90 (267)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS-CG----GGEEEEECCTTSHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc-CC----CceEEEecCCCCHHHHHHHH---HHHHHHcCCCCEE
Confidence            5899999999999999999999887655432100000 00    01122222234455566655   4444444444677


Q ss_pred             EeccCCC
Q psy755           81 IDSSTVD   87 (183)
Q Consensus        81 id~s~~~   87 (183)
                      |++....
T Consensus        91 v~~Ag~~   97 (267)
T 2gdz_A           91 VNNAGVN   97 (267)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            7776543

>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}

Probab=93.02  E-value=0.063  Score=42.28  Aligned_cols=83  Identities=19%  Similarity=0.220  Sum_probs=56.3

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCc-------hhHHH----HHHc-C-CcccCCHHHHhccCCEEEEecCChHHHHHHhcCC
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNT-------DASQT----LAKE-G-ANMALSLSTLASGAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~-------~~~~~----~~~~-g-~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      |.++|+.+...|. +|+++|++-       +++..    +... . .....++.|+++++|++|=+..+..-.       
T Consensus       200 G~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~Sapgl~T-------  272 (398)
T 2a9f_A          200 GLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVSAPGVLK-------  272 (398)
T ss_dssp             HHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECCSTTCCC-------
T ss_pred             HHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecCCCCCCC-------
Confidence            6688888888898 999999872       11211    1111 1 122457999999999988876432222       


Q ss_pred             ccccccCCCCcEEEeccCCCchhH
Q psy755           68 DGILKHAKPGVIVIDSSTVDPQVP   91 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s~~~~~~~   91 (183)
                      +++...+.++.+|+++|+-.|+..
T Consensus       273 ~EmVk~Ma~~pIIfalsNPt~E~~  296 (398)
T 2a9f_A          273 AEWISKMAARPVIFAMANPIPEIY  296 (398)
T ss_dssp             HHHHHTSCSSCEEEECCSSSCSSC
T ss_pred             HHHHHhhCCCCEEEECCCCCccCC
Confidence            444556779999999999877544

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=93.00  E-value=0.77  Score=35.55  Aligned_cols=76  Identities=14%  Similarity=0.198  Sum_probs=49.7

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcc----c---CCHHHHhc-----cCCEEEEecCChHHHHHHhcCCc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANM----A---LSLSTLAS-----GAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~----~---~~~~~~~~-----~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      |...++.+...|. +|++.++++++.+.+.+.|...    .   ++..+.+.     ..|+||-++..+..+...+    
T Consensus       204 G~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~----  279 (374)
T 2jhf_A          204 GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTAL----  279 (374)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHH----
T ss_pred             HHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHH----
Confidence            5566666667898 7999999999999888877532    1   12333332     5899999997655444443    


Q ss_pred             cccccCCCC-cEEEecc
Q psy755           69 GILKHAKPG-VIVIDSS   84 (183)
Q Consensus        69 ~l~~~l~~~-~iiid~s   84 (183)
                         ..++++ ..++..+
T Consensus       280 ---~~l~~~~G~iv~~G  293 (374)
T 2jhf_A          280 ---SCCQEAYGVSVIVG  293 (374)
T ss_dssp             ---HHBCTTTCEEEECS
T ss_pred             ---HHhhcCCcEEEEec
Confidence               445555 5555554

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=93.00  E-value=0.29  Score=36.05  Aligned_cols=74  Identities=15%  Similarity=0.254  Sum_probs=43.8

Q ss_pred             CcHHHHHHHHhCCCcEEEE-cCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVY-DKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++|+.|++.|++|++. +|+++..+.+.+.       ..+  ...++.++.  +.+...++.++   +.+...+.+=
T Consensus        38 IG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~Dl~~~~~v~~~~---~~~~~~~g~i  105 (272)
T 4e3z_A           38 IGAAVCRLAARQGWRVGVNYAANREAADAVVAA-------ITE--SGGEAVAIPGDVGNAADIAAMF---SAVDRQFGRL  105 (272)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-------HHH--TTCEEEEEECCTTCHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHH-------HHh--cCCcEEEEEcCCCCHHHHHHHH---HHHHHhCCCC
Confidence            5899999999999999775 8888776654432       111  012333332  33445555555   4454444444


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++|++...
T Consensus       106 d~li~nAg~  114 (272)
T 4e3z_A          106 DGLVNNAGI  114 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            667776654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=92.98  E-value=0.097  Score=38.93  Aligned_cols=30  Identities=27%  Similarity=0.528  Sum_probs=26.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|+++++.|++.|++|++.+|++++.+...
T Consensus        41 IG~aia~~L~~~G~~V~~~~r~~~~~~~~~   70 (276)
T 2b4q_A           41 IGQMIAQGLLEAGARVFICARDAEACADTA   70 (276)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766544

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=92.96  E-value=0.067  Score=38.65  Aligned_cols=54  Identities=11%  Similarity=0.129  Sum_probs=39.0

Q ss_pred             CcHHHHHHHHhC--CCcEEEEcCCchhHHHHHHcCCc-------ccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKN--GHDVIVYDKNTDASQTLAKEGAN-------MALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~-------~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|++.  |++|++.+|++++.+.+ ..++.       ..+++.+++++.|+||.+..
T Consensus        16 iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~   78 (253)
T 1xq6_A           16 TGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTS   78 (253)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEecc
Confidence            488999999999  89999999998776544 12221       11234566788999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=92.95  E-value=0.16  Score=37.81  Aligned_cols=30  Identities=20%  Similarity=0.389  Sum_probs=25.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|..+++.|++.|++|++.+|++++.+.+.
T Consensus        56 IG~~la~~L~~~G~~V~~~~r~~~~~~~~~   85 (285)
T 2c07_A           56 IGREIAKMLAKSVSHVICISRTQKSCDSVV   85 (285)
T ss_dssp             HHHHHHHHHTTTSSEEEEEESSHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence            589999999999999999999987766543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=92.94  E-value=0.11  Score=38.49  Aligned_cols=30  Identities=13%  Similarity=0.267  Sum_probs=26.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      +|+++++.|++.|++|++.+|++++.+.+.
T Consensus        18 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   47 (278)
T 1spx_A           18 IGRATAVLFAREGAKVTITGRHAERLEETR   47 (278)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            589999999999999999999988766543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=92.94  E-value=0.19  Score=36.51  Aligned_cols=74  Identities=12%  Similarity=0.280  Sum_probs=42.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcC-CchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDK-NTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++++.|++.|++|++.++ ++++.+.+.+.       +.+  ...++.++.  +.+...++.++   +++...+.+=
T Consensus        16 IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g~i   83 (246)
T 3osu_A           16 IGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEE-------IKA--KGVDSFAIQANVADADEVKAMI---KEVVSQFGSL   83 (246)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-------HHH--TTSCEEEEECCTTCHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-------HHh--cCCcEEEEEccCCCHHHHHHHH---HHHHHHcCCC
Confidence            589999999999999988765 55555544321       111  122333332  34445555555   4444444444


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      +++|++...
T Consensus        84 d~lv~nAg~   92 (246)
T 3osu_A           84 DVLVNNAGI   92 (246)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            667766654

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=92.90  E-value=0.84  Score=35.32  Aligned_cols=77  Identities=18%  Similarity=0.170  Sum_probs=50.3

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcc----c---CCHHHHhc-----cCCEEEEecCChHHHHHHhcCCc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANM----A---LSLSTLAS-----GAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~----~---~~~~~~~~-----~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      |...++.+...|. +|++.++++++.+.+.+.|...    .   .+..+.+.     ..|+||-++..+..+...+    
T Consensus       205 G~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~----  280 (374)
T 1cdo_A          205 GLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNAL----  280 (374)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHH----
T ss_pred             HHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHH----
Confidence            5556666667898 7999999999999888877532    1   12333332     5899999997655544443    


Q ss_pred             cccccCCCC-cEEEeccC
Q psy755           69 GILKHAKPG-VIVIDSST   85 (183)
Q Consensus        69 ~l~~~l~~~-~iiid~s~   85 (183)
                         ..++++ ..++..+.
T Consensus       281 ---~~l~~~~G~iv~~G~  295 (374)
T 1cdo_A          281 ---ESCLKGWGVSVLVGW  295 (374)
T ss_dssp             ---HTBCTTTCEEEECSC
T ss_pred             ---HHhhcCCcEEEEEcC
Confidence               455565 55555543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=92.87  E-value=0.047  Score=40.60  Aligned_cols=56  Identities=11%  Similarity=0.140  Sum_probs=41.1

Q ss_pred             CcHHHHHHHHhC-CCcEEEEcCCchhHHHHHHcCCc-------ccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKN-GHDVIVYDKNTDASQTLAKEGAN-------MALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~-------~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|.+. |++|++.+|++++.+.+...++.       ..+++.++++++|+||.+...
T Consensus        12 iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~   75 (289)
T 3e48_A           12 LGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI   75 (289)
T ss_dssp             HHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred             HHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            488999999987 99999999999876554333321       112345667899999998764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=92.84  E-value=0.39  Score=35.66  Aligned_cols=73  Identities=10%  Similarity=0.094  Sum_probs=44.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh---HHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA---SQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++++.|++.|++|++.+|+++.   .+.+.+.           ......+-.=+.+...++.++   +.+...+.+=
T Consensus        35 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~-----------~~~~~~~~~Dl~~~~~v~~~~---~~~~~~~g~i  100 (285)
T 2p91_A           35 IAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKG-----------FGSDLVVKCDVSLDEDIKNLK---KFLEENWGSL  100 (285)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH-----------TTCCCEEECCTTCHHHHHHHH---HHHHHHTSCC
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------cCCeEEEEcCCCCHHHHHHHH---HHHHHHcCCC
Confidence            5899999999999999999998852   2222211           111233333344556666665   5554444444


Q ss_pred             cEEEeccCCC
Q psy755           78 VIVIDSSTVD   87 (183)
Q Consensus        78 ~iiid~s~~~   87 (183)
                      .++|++....
T Consensus       101 D~lv~~Ag~~  110 (285)
T 2p91_A          101 DIIVHSIAYA  110 (285)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            6777766543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=92.83  E-value=0.12  Score=37.99  Aligned_cols=26  Identities=19%  Similarity=0.397  Sum_probs=22.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS   26 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~   26 (183)
                      +|+++++.|++.|++|++.+|++++.
T Consensus        33 IG~aia~~l~~~G~~V~~~~r~~~~~   58 (253)
T 2nm0_A           33 IGLAIARAFADAGDKVAITYRSGEPP   58 (253)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHhh
Confidence            58999999999999999999987653

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=92.81  E-value=0.2  Score=37.10  Aligned_cols=74  Identities=14%  Similarity=0.268  Sum_probs=42.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcC-CchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDK-NTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||.++|+.|++.|++|++.+| +++..+.+.+.       +.+  ...++.++.  +.+...++.++   +++...+.+=
T Consensus        40 IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~d~~~v~~~~---~~~~~~~g~i  107 (269)
T 4dmm_A           40 IGRAIALELAAAGAKVAVNYASSAGAADEVVAA-------IAA--AGGEAFAVKADVSQESEVEALF---AAVIERWGRL  107 (269)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-------HHH--TTCCEEEEECCTTSHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHH-------HHh--cCCcEEEEECCCCCHHHHHHHH---HHHHHHcCCC
Confidence            589999999999999999887 55555443321       111  112333332  34445555554   4444444444


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++|++...
T Consensus       108 d~lv~nAg~  116 (269)
T 4dmm_A          108 DVLVNNAGI  116 (269)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            666766554

>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*

Probab=92.80  E-value=0.25  Score=39.55  Aligned_cols=96  Identities=17%  Similarity=0.163  Sum_probs=59.1

Q ss_pred             CcHHHHHHHHhCCC---cEEEEc----CC--chhHHH---HH-------Hc-CCc-ccCCHHHHhccCCEEEEecCC--h
Q psy755            1 MGSHMARNLLKNGH---DVIVYD----KN--TDASQT---LA-------KE-GAN-MALSLSTLASGAEFIISMLPA--S   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~---~V~~~~----~~--~~~~~~---~~-------~~-g~~-~~~~~~~~~~~adiVi~~vp~--~   57 (183)
                      +|++++..|.+.|.   +|+++|    |+  ..+.++   +.       .. +.. ...++.+.++++|++|-++|.  +
T Consensus       197 Ag~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~aDVlInaT~~~~G  276 (439)
T 2dvm_A          197 AGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPG  276 (439)
T ss_dssp             HHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTCSEEEECSCCCSS
T ss_pred             HHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhccCCEEEEcCCCccC
Confidence            36789999999998   799999    87  222111   21       11 111 245688889999999999987  3


Q ss_pred             HHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEE
Q psy755           58 QDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFL  106 (183)
Q Consensus        58 ~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~  106 (183)
                      ...+..       ...+.++.+|+|+++-.+...   .+...+.|...+
T Consensus       277 ~~~~e~-------v~~m~~~~iVfDLynP~~t~~---~~~A~~~G~~iv  315 (439)
T 2dvm_A          277 VIKPQW-------IEKMNEDAIVFPLANPVPEIL---PEEAKKAGARIV  315 (439)
T ss_dssp             SSCHHH-------HTTSCTTCEEEECCSSSCSSC---HHHHHHHTCSEE
T ss_pred             CCChHH-------HHhcCCCCEEEECCCCCCcch---HHHHHHcCCeEE
Confidence            211222       234567889999955444333   223333466655

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=92.79  E-value=0.091  Score=39.30  Aligned_cols=80  Identities=15%  Similarity=0.200  Sum_probs=48.5

Q ss_pred             CcHHHHHHHH-hCCCcEE-EEcCCchhH--HHHH------HcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            1 MGSHMARNLL-KNGHDVI-VYDKNTDAS--QTLA------KEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         1 mG~~iA~~l~-~~g~~V~-~~~~~~~~~--~~~~------~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      ||+.+++.+. ..|++++ ++|+++++.  +.+.      ..++...++++++++++|+||-.+++ ......+      
T Consensus        17 mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~p-~~~~~~~------   89 (273)
T 1dih_A           17 MGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRP-EGTLNHL------   89 (273)
T ss_dssp             HHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCH-HHHHHHH------
T ss_pred             HHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCCh-HHHHHHH------
Confidence            6888888876 4577877 678876531  1110      11344456777877889999966644 3333332      


Q ss_pred             cccCCCCcEEEeccCCC
Q psy755           71 LKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~   87 (183)
                      ...+..|..++-.++..
T Consensus        90 ~~a~~~G~~vVigTtG~  106 (273)
T 1dih_A           90 AFCRQHGKGMVIGTTGF  106 (273)
T ss_dssp             HHHHHTTCEEEECCCCC
T ss_pred             HHHHhCCCCEEEECCCC
Confidence            34556777776655543

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=92.77  E-value=0.26  Score=36.44  Aligned_cols=73  Identities=11%  Similarity=0.136  Sum_probs=44.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch---hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD---ASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++++.|++.|++|++.+|+++   ..+.+.+.           ......+..=+.+...++.++   +.+...+.+=
T Consensus        20 IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~-----------~~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~i   85 (275)
T 2pd4_A           20 IAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE-----------LNSPYVYELDVSKEEHFKSLY---NSVKKDLGSL   85 (275)
T ss_dssp             HHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH-----------TTCCCEEECCTTCHHHHHHHH---HHHHHHTSCE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------cCCcEEEEcCCCCHHHHHHHH---HHHHHHcCCC
Confidence            589999999999999999999886   22222221           011233334445556666665   5554444444


Q ss_pred             cEEEeccCCC
Q psy755           78 VIVIDSSTVD   87 (183)
Q Consensus        78 ~iiid~s~~~   87 (183)
                      +++|++....
T Consensus        86 d~lv~nAg~~   95 (275)
T 2pd4_A           86 DFIVHSVAFA   95 (275)
T ss_dssp             EEEEECCCCC
T ss_pred             CEEEECCccC
Confidence            6677766543

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=92.77  E-value=0.054  Score=41.16  Aligned_cols=55  Identities=24%  Similarity=0.323  Sum_probs=38.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-------cCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-------ALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|.+.|++|++.+|++++.+.+...++..       .+++.++++++|+||-+..
T Consensus        25 iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~   86 (342)
T 2x4g_A           25 LGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG   86 (342)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred             HHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            488999999999999999999987655443323211       1234456778999998874

>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*

Probab=92.75  E-value=1.2  Score=32.24  Aligned_cols=98  Identities=10%  Similarity=0.011  Sum_probs=63.9

Q ss_pred             HHHHHHHhCCC--cEEEEcCCchhHHHHHHc----CCc-----ccCCHHHHhc---cCCEEEEecCChHHHHHHhcCCcc
Q psy755            4 HMARNLLKNGH--DVIVYDKNTDASQTLAKE----GAN-----MALSLSTLAS---GAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         4 ~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~----g~~-----~~~~~~~~~~---~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      .++..+++.|.  +|+..|.++..++.+.+.    |..     ...+.-+.+.   ..|+|+++--....+..++   +.
T Consensus        28 ~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~Gg~~i~~Il---~~  104 (225)
T 3kr9_A           28 YLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGMGGRLIARIL---EE  104 (225)
T ss_dssp             HHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECHHHHHHHH---HH
T ss_pred             HHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCCChHHHHHHH---HH
Confidence            45666777764  699999999987766542    331     1223322222   4899988766666677877   67


Q ss_pred             ccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           70 ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+.+.++..+|-....   ....+.+++.+.|+..++
T Consensus       105 ~~~~L~~~~~lVlq~~~---~~~~vr~~L~~~Gf~i~~  139 (225)
T 3kr9_A          105 GLGKLANVERLILQPNN---REDDLRIWLQDHGFQIVA  139 (225)
T ss_dssp             TGGGCTTCCEEEEEESS---CHHHHHHHHHHTTEEEEE
T ss_pred             HHHHhCCCCEEEEECCC---CHHHHHHHHHHCCCEEEE
Confidence            77788877766655542   455667777777766555

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=92.73  E-value=0.77  Score=35.56  Aligned_cols=77  Identities=14%  Similarity=0.122  Sum_probs=49.9

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCccc-------CCHHHHhc-----cCCEEEEecCChHHHHHHhcCCc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMA-------LSLSTLAS-----GAEFIISMLPASQDVLDAYDGSD   68 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~~-----~adiVi~~vp~~~~~~~v~~~~~   68 (183)
                      |...++.+...|. +|++.++++++.+.+.+.|....       ++..+.+.     ..|+||-++..+..+...+    
T Consensus       208 G~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~----  283 (376)
T 1e3i_A          208 GLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAV----  283 (376)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHH----
T ss_pred             HHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHH----
Confidence            5556666667798 79999999999998888775321       12333322     5899999997655444443    


Q ss_pred             cccccCCCC-cEEEeccC
Q psy755           69 GILKHAKPG-VIVIDSST   85 (183)
Q Consensus        69 ~l~~~l~~~-~iiid~s~   85 (183)
                         ..++++ ..++..+.
T Consensus       284 ---~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          284 ---DCTVLGWGSCTVVGA  298 (376)
T ss_dssp             ---HTBCTTTCEEEECCC
T ss_pred             ---HHhhcCCCEEEEECC
Confidence               455555 55555543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=92.67  E-value=0.035  Score=40.13  Aligned_cols=56  Identities=13%  Similarity=0.152  Sum_probs=39.1

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHcCC-------cccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKEGA-------NMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|++.|+  +|++.+|++++.+.....++       ...++..++++..|+||.+...
T Consensus        30 iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           30 TGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            58999999999999  99999999875432221121       1123445567789999998854

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=92.66  E-value=0.12  Score=39.11  Aligned_cols=55  Identities=18%  Similarity=0.210  Sum_probs=38.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-------cCCc--------ccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-------EGAN--------MALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-------~g~~--------~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|++.|++|++.+|++++.+.+.+       .++.        ..++..++++++|+||-+..
T Consensus        23 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~A~   92 (342)
T 1y1p_A           23 VASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIAS   92 (342)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEEeCC
Confidence            4889999999999999999999877654432       1111        11233455668999998764

>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}

Probab=92.63  E-value=0.21  Score=38.35  Aligned_cols=103  Identities=17%  Similarity=0.183  Sum_probs=59.7

Q ss_pred             CcHHHHHHHHhC---------CCcEEE-EcCCchhHH-----HHHH---cCCcccC--CHHHHhc--cCCEEEEecCChH
Q psy755            1 MGSHMARNLLKN---------GHDVIV-YDKNTDASQ-----TLAK---EGANMAL--SLSTLAS--GAEFIISMLPASQ   58 (183)
Q Consensus         1 mG~~iA~~l~~~---------g~~V~~-~~~~~~~~~-----~~~~---~g~~~~~--~~~~~~~--~adiVi~~vp~~~   58 (183)
                      ||+.+++.|.+.         +.+|+. +|+++.+.+     .+.+   .....++  +..++++  +.|+|+.++|...
T Consensus        13 VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~iDvVv~~tp~~~   92 (327)
T 3do5_A           13 VGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADYDVLIEASVTRV   92 (327)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCCSEEEECCCCC-
T ss_pred             HHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCCCEEEECCCCcc
Confidence            477778777764         456554 588865432     1111   1123333  8888875  5899999999864


Q ss_pred             HHHHHhcCCccccccCCCCcEEEeccCCCch--hHHHHHHHHHhcCCcEEe
Q psy755           59 DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQ--VPQTLSNLAREKQITFLD  107 (183)
Q Consensus        59 ~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~--~~~~~~~~~~~~g~~~~~  107 (183)
                      ......   +-....+..|+.|+-.+. .|.  ....+.+..++.|.++.-
T Consensus        93 h~~~a~---~~~~~aL~aGkhVv~~NK-kpla~~~~eL~~~A~~~g~~~~~  139 (327)
T 3do5_A           93 DGGEGV---NYIREALKRGKHVVTSNK-GPLVAEFHGLMSLAERNGVRLMY  139 (327)
T ss_dssp             ---CHH---HHHHHHHTTTCEEEECCS-HHHHHHHHHHHHHHHHTTCCEEC
T ss_pred             cchhHH---HHHHHHHHCCCeEEecCc-hhhHHHHHHHHHHHHhhCCcEEE
Confidence            310011   223457789999875533 232  345666666677876653

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=92.61  E-value=0.14  Score=39.60  Aligned_cols=79  Identities=14%  Similarity=0.066  Sum_probs=46.4

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHH----c-C--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAK----E-G--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~----~-g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      +|+.+.+.|.++.. +++...+..+.-.++..    . +  .....+..+ ..++|+||+|+|.....+.+       ..
T Consensus        16 iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~~~s~~~a-------~~   87 (345)
T 2ozp_A           16 AGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPHGVFAREF-------DR   87 (345)
T ss_dssp             HHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCTTHHHHTH-------HH
T ss_pred             HHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCcHHHHHHH-------HH
Confidence            47788888887654 76665433222111111    0 1  111223334 47899999999986543332       24


Q ss_pred             cCCCCcEEEeccCCC
Q psy755           73 HAKPGVIVIDSSTVD   87 (183)
Q Consensus        73 ~l~~~~iiid~s~~~   87 (183)
                      ++..|..+||.|+..
T Consensus        88 ~~~aG~~VId~Sa~~  102 (345)
T 2ozp_A           88 YSALAPVLVDLSADF  102 (345)
T ss_dssp             HHTTCSEEEECSSTT
T ss_pred             HHHCCCEEEEcCccc
Confidence            456788999999864

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=92.60  E-value=0.75  Score=35.27  Aligned_cols=77  Identities=10%  Similarity=0.036  Sum_probs=50.4

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc----c--CCH-HHH---h-----ccCCEEEEecCChHHHHHHhcC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM----A--LSL-STL---A-----SGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~--~~~-~~~---~-----~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      |...++.+...|.+|++.++++++.+.+.+.|...    .  .+. +++   .     ...|+||-++..+..+...+  
T Consensus       181 G~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~--  258 (352)
T 1e3j_A          181 GLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGI--  258 (352)
T ss_dssp             HHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHH--
T ss_pred             HHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHH--
Confidence            55666666678999999999999988888877531    1  121 222   2     25899999997754444443  


Q ss_pred             CccccccCCCCcEEEeccC
Q psy755           67 SDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~   85 (183)
                           ..++++..++..+.
T Consensus       259 -----~~l~~~G~iv~~G~  272 (352)
T 1e3j_A          259 -----NITRTGGTLMLVGM  272 (352)
T ss_dssp             -----HHSCTTCEEEECSC
T ss_pred             -----HHHhcCCEEEEEec
Confidence                 45566666665553

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=92.60  E-value=0.42  Score=36.51  Aligned_cols=78  Identities=13%  Similarity=0.103  Sum_probs=52.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-----cCCHHHHhc----cCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-----ALSLSTLAS----GAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~----~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      +|...++.+...|.+|++.++++++.+.+.+.|...     ..+..+.+.    ..|+||.++..+..++..+       
T Consensus       178 vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~~~~~~~-------  250 (340)
T 3s2e_A          178 LGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAI-------  250 (340)
T ss_dssp             THHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHH-------
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHHHHHHHH-------
Confidence            466677777778999999999999999888877532     123333332    5799999987766555543       


Q ss_pred             ccCCCCcEEEeccC
Q psy755           72 KHAKPGVIVIDSST   85 (183)
Q Consensus        72 ~~l~~~~iiid~s~   85 (183)
                      +.++++..++..+.
T Consensus       251 ~~l~~~G~iv~~G~  264 (340)
T 3s2e_A          251 GMVRRGGTIALNGL  264 (340)
T ss_dssp             HHEEEEEEEEECSC
T ss_pred             HHhccCCEEEEeCC
Confidence            34555555555543

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=92.59  E-value=0.24  Score=36.97  Aligned_cols=31  Identities=29%  Similarity=0.482  Sum_probs=27.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|.++++.|++.|++|++.+|++++.+.+.+
T Consensus        28 IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~   58 (291)
T 3rd5_A           28 LGAVTARELARRGATVIMAVRDTRKGEAAAR   58 (291)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            5899999999999999999999988776654

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=92.57  E-value=0.17  Score=37.63  Aligned_cols=30  Identities=20%  Similarity=0.410  Sum_probs=24.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcC-CchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDK-NTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~-~~~~~~~~~   30 (183)
                      +|.++|+.|++.|++|++.++ ++++.+...
T Consensus        41 IG~aia~~la~~G~~V~~~~~~~~~~~~~~~   71 (280)
T 4da9_A           41 IGLGIARALAASGFDIAITGIGDAEGVAPVI   71 (280)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH
Confidence            589999999999999999885 666555443

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=92.53  E-value=0.021  Score=41.82  Aligned_cols=26  Identities=19%  Similarity=0.341  Sum_probs=23.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS   26 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~   26 (183)
                      +|.++++.|++.|++|++.+|++++.
T Consensus        13 IG~~~a~~l~~~G~~V~~~~r~~~~~   38 (257)
T 1fjh_A           13 IGAATRKVLEAAGHQIVGIDIRDAEV   38 (257)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSSSSE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            58999999999999999999987653

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=92.47  E-value=0.16  Score=39.04  Aligned_cols=78  Identities=21%  Similarity=0.197  Sum_probs=53.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc-CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA-LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      |...++.+...|.+|++.++++++.+.+.+.|.... .+..++.+..|+||-++..+..+...+       ..++++..+
T Consensus       189 G~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~~~~~-------~~l~~~G~i  261 (348)
T 3two_A          189 GSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDLKDYL-------KLLTYNGDL  261 (348)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCHHHHH-------TTEEEEEEE
T ss_pred             HHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHHHHHH-------HHHhcCCEE
Confidence            556666666789999999999999998888875321 233333347899999998764555543       345566666


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      +..+..
T Consensus       262 v~~G~~  267 (348)
T 3two_A          262 ALVGLP  267 (348)
T ss_dssp             EECCCC
T ss_pred             EEECCC
Confidence            665543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=92.42  E-value=0.15  Score=38.10  Aligned_cols=76  Identities=14%  Similarity=0.205  Sum_probs=47.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCCh-HHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPAS-QDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~-~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +|.++|+.|++.|++|++.+|++++.+...+.       +.+. ....+.++.  +.+. ..++.++   +.+.....+=
T Consensus        24 IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~-------l~~~-~~~~~~~~~~Dl~~~~~~v~~~~---~~~~~~~g~i   92 (311)
T 3o26_A           24 IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEK-------LKNS-NHENVVFHQLDVTDPIATMSSLA---DFIKTHFGKL   92 (311)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHTT-TCCSEEEEECCTTSCHHHHHHHH---HHHHHHHSSC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhc-CCCceEEEEccCCCcHHHHHHHH---HHHHHhCCCC
Confidence            58999999999999999999999877665432       0000 112333333  3343 4555554   4444444445


Q ss_pred             cEEEeccCCC
Q psy755           78 VIVIDSSTVD   87 (183)
Q Consensus        78 ~iiid~s~~~   87 (183)
                      .++|++.+..
T Consensus        93 D~lv~nAg~~  102 (311)
T 3o26_A           93 DILVNNAGVA  102 (311)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCccc
Confidence            6777777654

>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*

Probab=92.39  E-value=0.11  Score=38.49  Aligned_cols=88  Identities=16%  Similarity=0.151  Sum_probs=54.9

Q ss_pred             CcHHHHHHHHhCCCcEE-EEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVI-VYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+.+++.  . +++++ +|+   ++...+   |+..++++++++.++|+|+.|-+. ..++..      ..+.|..|+-
T Consensus        23 IG~~v~~~--~-~leLv~v~~---~k~gel---gv~a~~d~d~lla~pD~VVe~A~~-~av~e~------~~~iL~aG~d   86 (253)
T 1j5p_A           23 IGKKLVEL--G-NFEKIYAYD---RISKDI---PGVVRLDEFQVPSDVSTVVECASP-EAVKEY------SLQILKNPVN   86 (253)
T ss_dssp             HHHHHHHH--S-CCSEEEEEC---SSCCCC---SSSEECSSCCCCTTCCEEEECSCH-HHHHHH------HHHHTTSSSE
T ss_pred             HHHHHHhc--C-CcEEEEEEe---cccccc---CceeeCCHHHHhhCCCEEEECCCH-HHHHHH------HHHHHHCCCC
Confidence            46667766  4 77764 577   333322   666677888888899999999854 444432      3567889998


Q ss_pred             EEeccCCC---chhHHHHHHHHHhcCCc
Q psy755           80 VIDSSTVD---PQVPQTLSNLAREKQIT  104 (183)
Q Consensus        80 iid~s~~~---~~~~~~~~~~~~~~g~~  104 (183)
                      ++-+|...   +...+.+.+..++-|..
T Consensus        87 vv~~S~gaLad~~l~~~L~~aA~~gg~~  114 (253)
T 1j5p_A           87 YIIISTSAFADEVFRERFFSELKNSPAR  114 (253)
T ss_dssp             EEECCGGGGGSHHHHHHHHHHHHTCSCE
T ss_pred             EEEcChhhhcCHHHHHHHHHHHHHCCCe
Confidence            88777543   22233444444444544

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=92.34  E-value=0.21  Score=36.63  Aligned_cols=75  Identities=16%  Similarity=0.176  Sum_probs=43.3

Q ss_pred             CcHHHHHHHHhCCCcEEEE-cCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVY-DKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +|.++++.|++.|++|++. +++.+..+...+.       +.+.-.....+-.=+.+...++.++   +++...+.+=.+
T Consensus        20 IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~id~   89 (259)
T 3edm_A           20 IGRACAIRFAQEGANVVLTYNGAAEGAATAVAE-------IEKLGRSALAIKADLTNAAEVEAAI---SAAADKFGEIHG   89 (259)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHH-------HHTTTSCCEEEECCTTCHHHHHHHH---HHHHHHHCSEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-------HHhcCCceEEEEcCCCCHHHHHHHH---HHHHHHhCCCCE
Confidence            5899999999999999987 6777665544321       0100011222333344555666665   555444444456


Q ss_pred             EEeccC
Q psy755           80 VIDSST   85 (183)
Q Consensus        80 iid~s~   85 (183)
                      +|++..
T Consensus        90 lv~nAg   95 (259)
T 3edm_A           90 LVHVAG   95 (259)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            666654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=92.32  E-value=0.36  Score=36.09  Aligned_cols=76  Identities=12%  Similarity=0.207  Sum_probs=47.9

Q ss_pred             CcHHHHHHHHhCCC---cEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH---DVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~---~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      +|.++|+.|++.|+   +|++.+|++++.+.+.+.       +.+.....++.++.  +.+...++.++   +++...+.
T Consensus        45 IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dv~d~~~v~~~~---~~~~~~~g  114 (287)
T 3rku_A           45 IGKATALEYLEASNGDMKLILAARRLEKLEELKKT-------IDQEFPNAKVHVAQLDITQAEKIKPFI---ENLPQEFK  114 (287)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-------HHHHCTTCEEEEEECCTTCGGGHHHHH---HTSCGGGC
T ss_pred             HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHH-------HHhhCCCCeEEEEECCCCCHHHHHHHH---HHHHHhcC
Confidence            58999999999887   899999999887765432       11111122333332  34556666666   55555554


Q ss_pred             CCcEEEeccCC
Q psy755           76 PGVIVIDSSTV   86 (183)
Q Consensus        76 ~~~iiid~s~~   86 (183)
                      +=+++|++...
T Consensus       115 ~iD~lVnnAG~  125 (287)
T 3rku_A          115 DIDILVNNAGK  125 (287)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            55677776653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	183
d1vpda2	161	c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase	1e-40
d3cuma2	162	c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase	5e-38
d2cvza2	156	c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase	1e-26
d1pgja2	178	c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase	4e-24
d1i36a2	152	c.2.1.6 (A:1-152) Conserved hypothetical protein M	7e-21
d2pgda2	176	c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase	2e-18
d2i76a2	153	c.2.1.6 (A:2-154) Hypothetical protein TM1727 {The	1e-15
d2b0ja2	242	c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopt	8e-15
d2pv7a2	152	c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {	1e-13
d2f1ka2	165	c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {S	2e-13
d1vpda1	133	a.100.1.1 (A:164-296) Hydroxyisobutyrate dehydroge	6e-08
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-07
d3cuma1	134	a.100.1.1 (A:163-296) Hydroxyisobutyrate dehydroge	2e-07
d2cvza1	132	a.100.1.1 (A:158-289) Hydroxyisobutyrate dehydroge	8e-07
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	6e-05
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	9e-05
d1bg6a2	184	c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvalin	1e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	2e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	2e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	3e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	4e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	4e-04
d2ahra2	152	c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductas	5e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	8e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.001
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	0.002
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.002
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.002
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.002
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	0.004
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	0.004

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Length = 161

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

 Score =  133 bits (335), Expect = 1e-40
 Identities = 59/151 (39%), Positives = 92/151 (60%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  M++NLLK G+ ++V D+N +A   +   GA  A +   +A   + II+MLP S  V
Sbjct: 11  MGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHV 70

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            +   G +GI++ AKPG ++ID S++ P   + +S+  + K +  LDAPVSGG   A + 
Sbjct: 71  KEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDG 130

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCG 151
           TL+ MVGGDK+  +K   ++K M  ++VH G
Sbjct: 131 TLSVMVGGDKAIFDKYYDLMKAMAGSVVHTG 161

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 162

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score =  126 bits (317), Expect = 5e-38
 Identities = 73/151 (48%), Positives = 93/151 (61%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG+ MA NLLK G+ + V+D    A   L   GA+ A S      GA+ +ISMLPASQ V
Sbjct: 12  MGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHV 71

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
              Y   DG+L H  PG +V++ ST+ P   + +   ARE+ +  LDAPVSGGT  A   
Sbjct: 72  EGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAG 131

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCG 151
           TLTFMVGGD  +LEKA+P+ + MGRNI H G
Sbjct: 132 TLTFMVGGDAEALEKARPLFEAMGRNIFHAG 162

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 156

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 96.9 bits (240), Expect = 1e-26
 Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           MG  MA +L +    ++       A +   + G+                  +       
Sbjct: 11  MGYPMAGHLARRFPTLVWNRTFEKALRHQEEFGSEA-----VPLERVAEARVIFTCLPTT 65

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
            + Y+ ++ +  + + G   +D+++ +P+  + L+   REK +T+LDAPVSGGT  A+  
Sbjct: 66  REVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAG 125

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCG 151
           TLT M+GG + ++E+ +P L    + +VH G
Sbjct: 126 TLTVMLGGPEEAVERVRPFL-AYAKKVVHVG 155

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Length = 178

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

 Score = 91.2 bits (225), Expect = 4e-24
 Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTL-ASGAEFIISMLPASQD 59
           MG+++A N+ + G  V V+++    S+   K  A+   + +       E   + L   + 
Sbjct: 12  MGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRK 71

Query: 60  VLDAYDGSDGI-------LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSG 112
            L                 K  + G I++D+     +     +       + FL   +SG
Sbjct: 72  ALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISG 131

Query: 113 GTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIV----HCGDSGNG 156
           G +        F  GG  S  E+ +PI++               +G+G
Sbjct: 132 GEE-GARKGPAFFPGGTLSVWEEIRPIVEAAAAKADDGRPCVTMNGSG 178

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 152

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

 Score = 81.8 bits (201), Expect = 7e-21
 Identities = 24/152 (15%), Positives = 46/152 (30%), Gaps = 12/152 (7%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           +   +A  L   G +V+   +    S         +  +          +IS +     +
Sbjct: 11  VAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVAL 70

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
             A      +          +D + + P+  +  S+L   ++  F+DA + G  +     
Sbjct: 71  GAARRAGRHVRGI------YVDINNISPETVRMASSLI--EKGGFVDAAIMGSVRRKGAD 122

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGD 152
                 G D     K    L   G NI   G 
Sbjct: 123 IRIIASGRDAEEFMK----LNRYGLNIEVRGR 150

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

 Score = 76.2 bits (186), Expect = 2e-18
 Identities = 26/152 (17%), Positives = 55/152 (36%), Gaps = 6/152 (3%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMAL-----SLSTLASGAEFIISMLP 55
           MG ++  N+  +G  V  +++            A         SL  + S  +    ++ 
Sbjct: 13  MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIIL 72

Query: 56  ASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTK 115
             +      +  + ++     G I+ID    + +         ++K I F+ + VSGG  
Sbjct: 73  LVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGED 132

Query: 116 AAQEATLTFMVGGDKSSLEKAKPILKCMGRNI 147
                  + M GG+K +    K I + +   +
Sbjct: 133 -GARYGPSLMPGGNKEAWPHIKAIFQGIAAKV 163

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} Length = 153

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

 Score = 68.5 bits (166), Expect = 1e-15
 Identities = 16/152 (10%), Positives = 39/152 (25%), Gaps = 10/152 (6%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           +       L        +  ++ D ++ LA+     A +L         +  ++P     
Sbjct: 10  LTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDRYIK 69

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
                 ++ +       V      + +               I    +  S       + 
Sbjct: 70  ----TVANHLNLGDAVLVHCSGFLSSEIFKKS------GRASIHPNFSFSSLEKALEMKD 119

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIVHCGD 152
            + F + GD+  L   K I + +         
Sbjct: 120 QIVFGLEGDERGLPIVKKIAEEISGKYFVIPS 151

>d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 5,10-methenyltetrahydromethanopterin hydrogenase, HMD
species: Archaeon Methanocaldococcus jannaschii [TaxId: 2190]

 Score = 67.7 bits (165), Expect = 8e-15
 Identities = 20/144 (13%), Positives = 35/144 (24%), Gaps = 11/144 (7%)

Query: 6   ARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYD 65
           A+ L K     I      D        G  +         GA+ +I+ LP      D   
Sbjct: 108 AKELPKPPKACIHLVHPEDV-------GLKVTSDDREAVEGADIVITWLPKGNKQPDIIK 160

Query: 66  GSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFM 125
                      G IV  + T+       +      + +    +   G     +       
Sbjct: 161 K---FADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNI-TSYHPGCVPEMKGQVYIAE 216

Query: 126 VGGDKSSLEKAKPILKCMGRNIVH 149
               + ++ K   I K        
Sbjct: 217 GYASEEAVNKLYEIGKIARGKAFK 240

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Length = 152

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

 Score = 63.0 bits (152), Expect = 1e-13
 Identities = 14/151 (9%), Positives = 41/151 (27%), Gaps = 22/151 (14%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           +G   AR L  +G+ + + D+   A                           ++  S  +
Sbjct: 21  LGGLFARYLRASGYPISILDREDWAVAE-----------------SILANADVVIVSVPI 63

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQIT--FLDAPVSGGTKAAQ 118
               +  + +  +    +++ D ++V  +    +  +     +    +            
Sbjct: 64  NLTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVHTGAVLGLHPMFGADIAS---MA 120

Query: 119 EATLTFMVGGDKSSLEKAKPILKCMGRNIVH 149
           +  +    G      E     ++  G  I  
Sbjct: 121 KQVVVRCDGRFPERYEWLLEQIQIWGAKIYQ 151

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 165

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

 Score = 62.9 bits (151), Expect = 2e-13
 Identities = 29/158 (18%), Positives = 52/158 (32%), Gaps = 11/158 (6%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           +G+ +A +L + GH +I   +     +   +                  II +    Q +
Sbjct: 11  IGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQLI 70

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQ-ITFLDAPVSGGTKAAQE 119
           L   +       H  P  IV D ++V   + +  S L         +    + G   A+E
Sbjct: 71  LPTLEKLI---PHLSPTAIVTDVASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEE 127

Query: 120 -------ATLTFMVGGDKSSLEKAKPILKCMGRNIVHC 150
                    LT     D   L   + +L+ +G  I  C
Sbjct: 128 NLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVKIYLC 165

>d1vpda1 a.100.1.1 (A:164-296) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Length = 133

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

 Score = 47.4 bits (112), Expect = 6e-08
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 152 DSGNGQVAKLCNNMLLGVTMMGVAEAMNLG 181
           D G G V KL N +++ + +  ++EA+ L 
Sbjct: 1   DIGAGNVTKLANQVIVALNIAAMSEALTLA 30

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 47.4 bits (111), Expect = 1e-07
 Identities = 23/190 (12%), Positives = 52/190 (27%), Gaps = 18/190 (9%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           +G  +A  L   GH+++V  +  + ++  A E   +A   S      E        +   
Sbjct: 12  LGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLT 71

Query: 61  LDAYDGSDG------------------ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQ 102
           +      D                    +     G       +    V + L +      
Sbjct: 72  IPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEKVVSA 131

Query: 103 ITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGDSGNGQVAKLC 162
           +  + A          +  +      D+S       I +  G   +  G   N ++ +  
Sbjct: 132 LHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESL 191

Query: 163 NNMLLGVTMM 172
             ++L +   
Sbjct: 192 TPLILNIMRF 201

>d3cuma1 a.100.1.1 (A:163-296) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 45.5 bits (107), Expect = 2e-07
 Identities = 21/31 (67%), Positives = 23/31 (74%)

Query: 153 SGNGQVAKLCNNMLLGVTMMGVAEAMNLGVK 183
            G GQVAK+CNN LL V M+G AEAM LGV 
Sbjct: 2   DGAGQVAKVCNNQLLAVLMIGTAEAMALGVA 32

>d2cvza1 a.100.1.1 (A:158-289) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 132

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.3 bits (104), Expect = 8e-07
 Identities = 11/30 (36%), Positives = 13/30 (43%)

Query: 154 GNGQVAKLCNNMLLGVTMMGVAEAMNLGVK 183
           G G   K  NN LL V +    E +   VK
Sbjct: 2   GAGHAVKAINNALLAVNLWAAGEGLLALVK 31

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 39.6 bits (91), Expect = 6e-05
 Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 3/108 (2%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--GANMALSLSTLASGAEFIISMLPASQ 58
           +       L  +G  V V  +  ++++ L+     +          +  +  ++      
Sbjct: 13  VTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVI 72

Query: 59  DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFL 106
            ++     +  I    +    V+ +S V P     L   A++  IT +
Sbjct: 73  SLIPYTFHATVIKSAIRQKKHVVTTSYVSPA-MMELDQAAKDAGITVM 119

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (91), Expect = 9e-05
 Identities = 14/88 (15%), Positives = 27/88 (30%)

Query: 2   GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVL 61
           GSH    LL+ G+  +V D   +A +       ++           EF    +     + 
Sbjct: 15  GSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQ 74

Query: 62  DAYDGSDGILKHAKPGVIVIDSSTVDPQ 89
             +     +      G+  +  S   P 
Sbjct: 75  RLFKKYSFMAVIHFAGLKAVGESVQKPL 102

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Length = 184

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

 Score = 38.7 bits (89), Expect = 1e-04
 Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 19/103 (18%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN---------------MALSLSTLAS 45
            G   A  L   G  V+ +D +    + +   GA                +   +     
Sbjct: 12  GGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK 71

Query: 46  GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDP 88
            A+ I+ ++PA      A +    I  +   G ++I +     
Sbjct: 72  DADVILIVVPAIHHASIAAN----IASYISEGQLIILNPGATG 110

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.5 bits (88), Expect = 2e-04
 Identities = 7/27 (25%), Positives = 13/27 (48%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQT 28
          GS++   LL  G++V    + +    T
Sbjct: 14 GSYLTEFLLGKGYEVHGLIRRSSNFNT 40

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQTLAKE 32
          GSH    LL+NGHDVI+ D   ++ +++   
Sbjct: 13 GSHTCVQLLQNGHDVIILDNLCNSKRSVLPV 43

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 2e-04
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQTLAKE 32
          GS++A  LL+ G++V    + + +  T   E
Sbjct: 14 GSYLAEFLLEKGYEVHGIVRRSSSFNTGRIE 44

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.1 bits (87), Expect = 3e-04
 Identities = 6/27 (22%), Positives = 13/27 (48%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQT 28
          G+++A+ LL+ G+ V        +   
Sbjct: 13 GAYLAKLLLEKGYRVHGLVARRSSDTR 39

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 38.2 bits (87), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQT 28
          GS++A   L  G D+IV+D  +    T
Sbjct: 13 GSNLASFALSQGIDLIVFDNLSRKGAT 39

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.7 bits (86), Expect = 4e-04
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDAS 26
          GSH    L++NG+D +V D  ++++
Sbjct: 14 GSHTVVELIENGYDCVVADNLSNST 38

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 37.9 bits (87), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQT 28
          GS++A  LL+ G++V    +   +  T
Sbjct: 14 GSYLAEFLLEKGYEVHGIKRRASSFNT 40

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} Length = 152

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

 Score = 36.6 bits (83), Expect = 5e-04
 Identities = 17/148 (11%), Positives = 42/148 (28%), Gaps = 9/148 (6%)

Query: 1   MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDV 60
           M S + + L +  H++I+   + + S+        +A  L+   + +   +        +
Sbjct: 11  MASAIIKGLKQTPHELIISGSSLERSK-------EIAEQLALPYAMSHQDLIDQVDLVIL 63

Query: 61  LDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEA 120
                  + +LK       +I  +       Q L+    +        P           
Sbjct: 64  GIKPQLFETVLKPLHFKQPIISMAAGISL--QRLATFVGQDLPLLRIMPNMNAQILQSST 121

Query: 121 TLTFMVGGDKSSLEKAKPILKCMGRNIV 148
            LT      +    + + +    G    
Sbjct: 122 ALTGNALVSQELQARVRDLTDSFGSTFD 149

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 36.8 bits (83), Expect = 8e-04
 Identities = 6/31 (19%), Positives = 10/31 (32%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQTLAKE 32
          G  ++  L   G  V  Y        +L + 
Sbjct: 21 GGWLSLWLQTMGATVKGYSLTAPTVPSLFET 51

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.9 bits (83), Expect = 0.001
 Identities = 6/22 (27%), Positives = 10/22 (45%)

Query: 2  GSHMARNLLKNGHDVIVYDKNT 23
          G   A +L K  ++V + D   
Sbjct: 14 GWATALHLSKKNYEVCIVDNLV 35

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.1 bits (82), Expect = 0.002
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDAS 26
          GS++   LLK    V+  D      
Sbjct: 29 GSNLLETLLKLDQKVVGLDNFATGH 53

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.1 bits (82), Expect = 0.002
 Identities = 11/34 (32%), Positives = 13/34 (38%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN 35
           SH+AR L   GH VI  D   +   T       
Sbjct: 28 ASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDE 61

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 35.9 bits (81), Expect = 0.002
 Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 4/50 (8%)

Query: 2  GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFII 51
          G H+A+  L  GH   +  + + AS    K     +      ASGA  + 
Sbjct: 16 GRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK----ASGANIVH 61

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 35.7 bits (80), Expect = 0.002
 Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 1/31 (3%)

Query: 2  GSHMARNLLKNGH-DVIVYDKNTDASQTLAK 31
          G+H+   LL+  H +V   D  +DA      
Sbjct: 13 GNHLTERLLREDHYEVYGLDIGSDAISRFLN 43

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 34.6 bits (77), Expect = 0.004
 Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 1/27 (3%)

Query: 2  GSHMARNLLKNG-HDVIVYDKNTDASQ 27
          GS++ + L   G  D++V D   D ++
Sbjct: 12 GSNIVKALNDKGITDILVVDNLKDGTK 38

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 2  GSHMARNLLKNGHDVIVYDK 21
          GSH+   L+ +GH+V V D 
Sbjct: 14 GSHLTDKLMMDGHEVTVVDN 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	183
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	99.98
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	99.97
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	99.94
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	99.92
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	99.91
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	99.84
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	99.84
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	99.78
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	99.75
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	99.74
d2b0ja2	242	5,10-methenyltetrahydromethanopterin hydrogenase,	99.69
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	99.59
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	99.58
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	99.49
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	99.48
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	99.38
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	99.36
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	99.28
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	99.23
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	98.88
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	98.85
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	98.82
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	98.78
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	98.77
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	98.66
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.62
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	98.58
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	98.58
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.57
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	98.4
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.34
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.29
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.1
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	98.1
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.94
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.68
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	97.63
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.6
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	97.57
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.53
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.52
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	97.32
d1mv8a3	136	GDP-mannose 6-dehydrogenase, GDP-binding domain {P	97.28
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	97.28
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	97.26
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	97.2
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.18
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.1
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.07
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	97.05
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	97.0
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.91
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	96.86
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.81
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.76
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.75
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.65
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.63
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	96.59
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.55
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	96.54
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.52
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.46
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.4
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.4
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.4
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.39
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.38
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.37
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.37
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	96.34
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.34
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	96.31
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	96.3
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.25
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.24
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	96.19
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.16
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.15
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.15
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.14
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.1
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.07
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.04
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.01
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	95.96
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.92
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	95.91
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.89
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	95.83
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	95.78
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	95.78
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.78
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	95.77
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	95.73
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.65
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	95.61
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	95.61
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	95.57
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	95.53
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	95.52
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.51
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	95.45
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.43
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	95.42
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	95.35
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	95.31
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	95.26
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	95.25
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	95.24
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	95.24
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.21
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	95.2
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.19
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.18
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	95.17
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	95.13
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	95.09
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	95.03
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.02
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	94.99
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.95
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	94.93
d1ycga1	149	Nitric oxide reductase C-terminal domain {Moorella	94.91
d1e5da1	152	Rubredoxin oxygen:oxidoreductase (ROO), C-terminal	94.87
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	94.84
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	94.79
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	94.76
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	94.66
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	94.6
d1l7da2	194	Nicotinamide nucleotide transhydrogenase dI compon	94.47
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	94.4
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	94.36
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	94.19
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	94.18
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.09
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	94.08
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.05
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	94.05
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.02
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	93.87
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	93.87
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	93.82
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.75
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.61
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	93.49
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	93.4
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	93.26
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	93.13
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	93.03
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	92.96
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	92.86
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	92.83
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	92.78
d1pjca2	193	L-alanine dehydrogenase {Phormidium lapideum [TaxI	92.62
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	92.56
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.36
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	92.25
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	92.19
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	91.88
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.84
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	91.69
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	91.65
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	91.64
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	91.64
d5nula_	138	Flavodoxin {Clostridium beijerinckii [TaxId: 1520]	91.48
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	91.48
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	91.47
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	91.41
d1vmea1	148	ROO-like flavoprotein TM0755, C-terminal domain {T	91.27
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	90.93
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	90.74
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	90.62
d2h1qa1	251	Hypothetical protein Dhaf_3308 {Desulfitobacterium	90.55
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	90.38
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	89.69
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	89.67
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	89.65
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	89.46
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	89.42
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	89.34
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.18
d2fz5a1	137	Flavodoxin {Megasphaera elsdenii [TaxId: 907]}	89.13
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	89.13
d1dlja3	108	UDP-glucose dehydrogenase (UDPGDH), C-terminal (UD	88.86
d1f4pa_	147	Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]}	88.83
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.76
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	88.66
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	88.58
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	88.51
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	88.22
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	87.92
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	87.62
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	87.51
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	87.48
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	87.42
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	87.23
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	86.58
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	86.04
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	85.82
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	85.59
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	84.99
d1js1x2	161	Transcarbamylase-like protein {Bacteroides fragili	84.74
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	84.69
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	84.66
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	84.64
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	84.34
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	84.09
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	83.67
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	83.29
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	82.94
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	82.41
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	82.37
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	81.93
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	81.61
d2ftsa3	155	Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId	81.57
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	81.02
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	80.96
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	80.76
d1ls1a2	207	GTPase domain of the signal sequence recognition p	80.75
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	80.67

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.98  E-value=1.2e-31  Score=187.41  Aligned_cols=151  Identities=39%  Similarity=0.657  Sum_probs=145.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||++|+++||+|++|||++++.+.+.+.+.....++.++++++|+||+|+|++.+++.++++.+++.+.+++|++|
T Consensus        11 MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~~~~~~g~ii   90 (161)
T d1vpda2          11 MGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVL   90 (161)
T ss_dssp             THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEE
T ss_pred             HHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchhhccCCCCEE
Confidence            89999999999999999999999999999999999999999999999999999999999999998777888999999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      +|+||..|.+.+.+.+.+.++|++|+++|+++++..+..|+++++++|+++.+++++++|+.+|.+++++|
T Consensus        91 id~sT~~p~~~~~~~~~~~~~g~~~vdapv~gg~~~a~~g~l~~~~gG~~~~~~~~~~il~~~~~~i~~~G  161 (161)
T d1vpda2          91 IDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTG  161 (161)
T ss_dssp             EECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEEEEEEE
T ss_pred             EECCCCCHHHHHHHHHHHHHcCCceecccccCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhcCceEECC
Confidence            99999999999999999999999999999999999999999999999999999999999999999998876

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.97  E-value=1.8e-30  Score=181.55  Aligned_cols=151  Identities=48%  Similarity=0.747  Sum_probs=144.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||++|.++||+|.+|||++++.+.+.+.+.....++.+.++.+|+|++++|.+...+.+++...++.+.+.+|++|
T Consensus        12 MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~~~~l~~g~ii   91 (162)
T d3cuma2          12 MGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLV   91 (162)
T ss_dssp             THHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCHHHHSCTTCEE
T ss_pred             HHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccccccCCCCCEE
Confidence            89999999999999999999999999999999988888999999999999999999999998886656788889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCG  151 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g  151 (183)
                      +|+|+..|.....+.+.+.++|++|+++|+++++..+..|+++++++|+++.+++++++|+.+|.+++++|
T Consensus        92 id~st~~p~~~~~~~~~~~~~gi~~~dapv~Gg~~~a~~G~l~~~~gG~~~~~~~~~~il~~~~~~v~~~G  162 (162)
T d3cuma2          92 LECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNIFHAG  162 (162)
T ss_dssp             EECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             EECCCCCHHHHHHHHHHHHHCCCcEEecccccCccccccCCeEEEecCCHHHHHHHHHHHHHHcCccEECc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=99.94  E-value=3.8e-27  Score=166.60  Aligned_cols=144  Identities=20%  Similarity=0.302  Sum_probs=131.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCC--------cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA--------NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~--------~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      ||.+||++|.++||+|++|||++++.+.+.+.+.        ...+++.+.+..+|++++++|....+..++   +++.+
T Consensus        13 MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~v~---~~l~~   89 (176)
T d2pgda2          13 MGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDNFI---EKLVP   89 (176)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHHHH---HHHHH
T ss_pred             HHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHHHH---HHHHh
Confidence            8999999999999999999999999999987643        223455567789999999999999999987   78899


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeE
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIV  148 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~  148 (183)
                      .+++|+++||+|+..|.+...+.+.+.++|++|+++|+++++..+..|. +++++|+++.+++++++|+.++.++.
T Consensus        90 ~~~~g~iiid~sT~~~~~~~~~~~~~~~~g~~~ldapvsGg~~~A~~G~-~~~~gG~~~~~~~~~~il~~~~~kv~  164 (176)
T d2pgda2          90 LLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP-SLMPGGNKEAWPHIKAIFQGIAAKVG  164 (176)
T ss_dssp             HCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECTTTHHHHHHHHHHHSCBCT
T ss_pred             ccccCcEEEecCcchhHHHHHHHHHHHhcCCceeccccccCcccccCCc-EEEcCCCHHHHHHHHHHHHHHhcccC
Confidence            9999999999999999999999999999999999999999999999998 88899999999999999999998763

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=4.5e-25  Score=152.93  Aligned_cols=146  Identities=29%  Similarity=0.517  Sum_probs=130.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||++|.++|+.+ +|+|++++.+.+.+.+.... +..+.+.++|++|+++|.+..+..+.   .++.+.+.+++++
T Consensus        11 MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~v~~~~---~~l~~~~~~~~~i   85 (156)
T d2cvza2          11 MGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEA-VPLERVAEARVIFTCLPTTREVYEVA---EALYPYLREGTYW   85 (156)
T ss_dssp             THHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEE-CCGGGGGGCSEEEECCSSHHHHHHHH---HHHTTTCCTTEEE
T ss_pred             HHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcc-cccccccceeEEEecccchhhhhhhh---ccccccccccccc
Confidence            9999999999999855 68888888777766644444 34456678999999999998888776   7888999999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~  152 (183)
                      +|+|+..|...+.+.+.+.++|++|+++|++|++..+..|+++++++|+++++++++++| +++.+++++||
T Consensus        86 id~sT~~p~~~~~~~~~~~~~gi~~ldapVsGg~~~A~~G~L~~~vgG~~~~~~~~~p~L-~~~~~v~~~GP  156 (156)
T d2cvza2          86 VDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-AYAKKVVHVGP  156 (156)
T ss_dssp             EECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-TTEEEEEEEES
T ss_pred             cccccCCHHHHHHHHHHHHHcCCeEEeccccCchhhhccCCEEEEEeCCHHHHHHHHHHH-HhcCcCEEeCc
Confidence            999999999999999999999999999999999999999999999999999999999999 59999999986

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.91  E-value=1.7e-24  Score=153.11  Aligned_cols=152  Identities=20%  Similarity=0.328  Sum_probs=134.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--------cCCH---HHHhccCCEEEEecCChHHHHHHhcCCcc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--------ALSL---STLASGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--------~~~~---~~~~~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      ||.+||++|+++||+|++|||++++.+.+.+.+...        ..+.   ...+..++.+++++++......++   ..
T Consensus        12 MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   88 (178)
T d1pgja2          12 MGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTI---EQ   88 (178)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHH---HH
T ss_pred             HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhh---hh
Confidence            899999999999999999999999999998765321        1222   234568899999999988888887   77


Q ss_pred             ccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeE-
Q psy755           70 ILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIV-  148 (183)
Q Consensus        70 l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~-  148 (183)
                      +.+.+.++++++|+|+..|.....+.+.+.+++++|+++|+++++..+..|. +++++|+++.+++++++|+.++.++. 
T Consensus        89 ~~~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~ldapv~g~~~~a~~g~-~~mvgG~~~~~~~v~pil~~~~~~~~~  167 (178)
T d1pgja2          89 LKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP-AFFPGGTLSVWEEIRPIVEAAAAKADD  167 (178)
T ss_dssp             HHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC-EEEEEECHHHHHHHHHHHHHHSCBCTT
T ss_pred             hhhhccccceecccCccchhHHHHHHHHHhhcceeEecccccCCcchhcCCc-EEEeeCCHHHHHHHHHHHHHHhccccC
Confidence            8889999999999999999999999999999999999999999999999997 78999999999999999999999887 


Q ss_pred             ---EeCCcchH
Q psy755          149 ---HCGDSGNG  156 (183)
Q Consensus       149 ---~~g~~g~a  156 (183)
                         ++|+.|+|
T Consensus       168 ~~~~~g~~G~G  178 (178)
T d1pgja2         168 GRPCVTMNGSG  178 (178)
T ss_dssp             SCBSCCCCCST
T ss_pred             CCCccCCCCCC
Confidence               88988864

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=99.84  E-value=7.2e-21  Score=132.59  Aligned_cols=146  Identities=20%  Similarity=0.264  Sum_probs=110.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-ccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-MALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||++||+.|.++||+|++|||++++.+++.+.+.. ...+..+.+++||+||+++|. ..+..++   +++.+.++++++
T Consensus        11 mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~-~~~~~vl---~~l~~~l~~~~i   86 (165)
T d2f1ka2          11 IGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPI-QLILPTL---EKLIPHLSPTAI   86 (165)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCH-HHHHHHH---HHHGGGSCTTCE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcH-hhhhhhh---hhhhhhcccccc
Confidence            79999999999999999999999999999888753 344555778999999999987 5688888   899999999999


Q ss_pred             EEeccCCCchhHHHHHHHHHhc-CCcEEeecccCCHHHHh----cCceEEEe---cCCHHHHHHHHHHHHHhcCCeEEe
Q psy755           80 VIDSSTVDPQVPQTLSNLAREK-QITFLDAPVSGGTKAAQ----EATLTFMV---GGDKSSLEKAKPILKCMGRNIVHC  150 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~----~~~~~~~~---~g~~~~~~~~~~l~~~~g~~~~~~  150 (183)
                      |+|+++..........+..... +.|.+..|...++..+.    .+..++++   +++++.++.++++|+.+|.++++|
T Consensus        87 v~~~~s~~~~~~~~~~~~~~~~~~~h~~~~~~~~g~~~a~~~l~~~~~~il~~~~~~~~~~~~~v~~l~~~lG~~v~~c  165 (165)
T d2f1ka2          87 VTDVASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEPLGVKIYLC  165 (165)
T ss_dssp             EEECCSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGGGTCEEEEC
T ss_pred             eeeccccchHHHHHHHHhhcccccceeeecccccchhhhcccccCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCEEEeC
Confidence            9999998877766555433211 22333333333443332    24444554   578899999999999999998764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=99.84  E-value=7.1e-21  Score=130.93  Aligned_cols=140  Identities=18%  Similarity=0.209  Sum_probs=112.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.+||++|.++||+|++|++++.+..+..+.+....+++.+++++||+||+|+|+++..+.+    ....+.  .++++
T Consensus        11 mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~~~~~~~~----~~~~~~--~~~~~   84 (152)
T d1i36a2          11 VAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPGVALGAA----RRAGRH--VRGIY   84 (152)
T ss_dssp             HHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGGGHHHHH----HHHHTT--CCSEE
T ss_pred             HHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecCchHHHHH----Hhhccc--CCcee
Confidence            899999999999999999999988877777666666778999999999999999987655544    455554  36899


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~  152 (183)
                      +|+|+..|...+.+.+.+++.  .|+++|+++++..+..+...++.+++.+.++    .++.+|.++.++|+
T Consensus        85 id~st~~p~~~~~l~~~~~~~--~~~d~~v~g~~~~~~~~~~~~~~G~~~~~~~----~l~~~g~~i~~~G~  150 (152)
T d1i36a2          85 VDINNISPETVRMASSLIEKG--GFVDAAIMGSVRRKGADIRIIASGRDAEEFM----KLNRYGLNIEVRGR  150 (152)
T ss_dssp             EECSCCCHHHHHHHHHHCSSS--EEEEEEECSCHHHHGGGCEEEEESTTHHHHH----GGGGGTCEEEECSS
T ss_pred             eccCcCCHHHHHHHHHHHhcc--CCCcccccCCcccccCCcEEEEECCCHHHHH----HHHHcCCeeeEcCC
Confidence            999999999999998887644  5999999999888877775555555545443    36789998888885

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=99.78  E-value=1.5e-20  Score=129.34  Aligned_cols=142  Identities=11%  Similarity=0.053  Sum_probs=105.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||++|+++|.+.++.+.+|+|++++.+++.+.+.....++.++++.+|+||+|+|+ ..+..++   +++.   .+++++
T Consensus        10 mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d-~~i~~v~---~~l~---~~~~iv   82 (153)
T d2i76a2          10 LTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPD-RYIKTVA---NHLN---LGDAVL   82 (153)
T ss_dssp             HHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCT-TTHHHHH---TTTC---CSSCCE
T ss_pred             HHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccc-hhhhHHH---hhhc---ccceee
Confidence            79999999977655567899999999999998776777889999999999999998 4577776   4442   478999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhcCCeEEeCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~g~  152 (183)
                      +|+|+..+....   +.....+.|++..+..++......+..++++++++++++.++++|+.+|.+++++++
T Consensus        83 i~~s~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~~~~~~~l~~~lG~~~~~i~~  151 (153)
T d2i76a2          83 VHCSGFLSSEIF---KKSGRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGKYFVIPS  151 (153)
T ss_dssp             EECCSSSCGGGG---CSSSEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCSCEEECCG
T ss_pred             eecccchhhhhh---hhhccccceeeeecccccchhhhccCcEEEEeCCHHHHHHHHHHHHHHCCcEEEeCC
Confidence            999998876542   122233566666666666666666666788899999999999999999999998864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=99.75  E-value=1.6e-17  Score=115.88  Aligned_cols=143  Identities=18%  Similarity=0.290  Sum_probs=112.2

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHcCCc--ccCCHHHH-hccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKEGAN--MALSLSTL-ASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~g~~--~~~~~~~~-~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ||.+||++|.+.|+  +|++||++++..+.+.+.+..  ..++..+. ..++|+||+|+|. +.+..++   +++.+.++
T Consensus        12 mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~-~~~~~vl---~~l~~~~~   87 (171)
T d2g5ca2          12 MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPV-RTFREIA---KKLSYILS   87 (171)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCH-HHHHHHH---HHHHHHSC
T ss_pred             HHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCc-hhhhhhh---hhhhcccc
Confidence            79999999999997  789999999999999988753  24444443 3579999999986 5577777   88999999


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCC----HHHHh----cCceEEEe---cCCHHHHHHHHHHHHHh
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGG----TKAAQ----EATLTFMV---GGDKSSLEKAKPILKCM  143 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~----~~~~~----~~~~~~~~---~g~~~~~~~~~~l~~~~  143 (183)
                      ++++|+|+++++......+.+.+..   +|+. ||++|+    +..+.    .+..++++   ..+++.++.++++|+.+
T Consensus        88 ~~~ii~d~~s~k~~~~~~~~~~~~~---~~i~~hPm~G~e~sG~~~a~~~Lf~g~~~il~p~~~~~~~~~~~v~~~~~~l  164 (171)
T d2g5ca2          88 EDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRVWEDV  164 (171)
T ss_dssp             TTCEEEECCSCCTHHHHHHHHHHGG---GEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHHHHHT
T ss_pred             ccccccccccccHHHHHHHHHhhcc---cccccccccccccccHHHHHHHhhCCCeEEEecCCCCCHHHHHHHHHHHHHc
Confidence            9999999999999988888776654   3554 677763    43332    25555665   34788999999999999


Q ss_pred             cCCeEEe
Q psy755          144 GRNIVHC  150 (183)
Q Consensus       144 g~~~~~~  150 (183)
                      |.++++|
T Consensus       165 G~~v~~M  171 (171)
T d2g5ca2         165 GGVVEYM  171 (171)
T ss_dssp             TCEEEEC
T ss_pred             CCEEEeC
Confidence            9988764

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=99.74  E-value=8.5e-18  Score=115.26  Aligned_cols=129  Identities=16%  Similarity=0.239  Sum_probs=105.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||++||++|.++||+|.+|||++...             ..+.+.++|++++++|... +..++   .++.+.+++++++
T Consensus        21 mG~~la~~L~~~G~~V~~~d~~~~~~-------------~~~~~~~~~~v~~~~~~~~-~~~v~---~~~~~~~~~~~ii   83 (152)
T d2pv7a2          21 LGGLFARYLRASGYPISILDREDWAV-------------AESILANADVVIVSVPINL-TLETI---ERLKPYLTENMLL   83 (152)
T ss_dssp             HHHHHHHHHHTTTCCEEEECTTCGGG-------------HHHHHTTCSEEEECSCGGG-HHHHH---HHHGGGCCTTSEE
T ss_pred             HHHHHHHHHHHcCCCcEecccccccc-------------cchhhhhccccccccchhh-heeee---ecccccccCCceE
Confidence            89999999999999999999988653             3455788999999998754 55665   8899999999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEe-cCCHHHHHHHHHHHHHhcCCeEE
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMV-GGDKSSLEKAKPILKCMGRNIVH  149 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~l~~~~g~~~~~  149 (183)
                      +|++++++...+.+.+..   ..+|+. ||++|+......+...+++ +++++.++++.++|+.+|.+++.
T Consensus        84 iD~~Svk~~~~~~~~~~~---~~~~v~~hP~~Gp~~~~~~g~~~v~~~g~~~~~~~~~~~ll~~~Ga~v~e  151 (152)
T d2pv7a2          84 ADLTSVKREPLAKMLEVH---TGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQIQIWGAKIYQ  151 (152)
T ss_dssp             EECCSCCHHHHHHHHHHC---SSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHHHHHTTCEEEE
T ss_pred             EEecccCHHHHHHHHHHc---cCCEEEecccCCCcccccCCcEEEEecCCCHHHHHHHHHHHHHhCCEEEe
Confidence            999999999887776543   345665 8999987766667666655 56788899999999999998864

>d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 5,10-methenyltetrahydromethanopterin hydrogenase, HMD
species: Archaeon Methanocaldococcus jannaschii [TaxId: 2190]

Probab=99.69  E-value=1.9e-17  Score=120.70  Aligned_cols=138  Identities=12%  Similarity=0.094  Sum_probs=111.3

Q ss_pred             HHHhCCCcEEEEcCCchhH-HHHHH------------------------------------cCCcccCCHHHHhccCCEE
Q psy755            8 NLLKNGHDVIVYDKNTDAS-QTLAK------------------------------------EGANMALSLSTLASGAEFI   50 (183)
Q Consensus         8 ~l~~~g~~V~~~~~~~~~~-~~~~~------------------------------------~g~~~~~~~~~~~~~adiV   50 (183)
                      +|++.|+.|++.|.+++++ +.+.+                                    .|+..++++.|+++++|+|
T Consensus        66 ~fa~~g~~v~~~d~d~~~v~~~~~~g~~~i~~p~l~~~v~~~~~~~~~~~~~~~~~~~pEe~Gv~v~~d~~Eav~~ADiI  145 (242)
T d2b0ja2          66 CFAEEPGLVVIDEFDPKEVMEAHLSGNPESIMPKIREVVKAKAKELPKPPKACIHLVHPEDVGLKVTSDDREAVEGADIV  145 (242)
T ss_dssp             GGGSSSEEEECCCSCHHHHHHHHHTTCGGGTHHHHHHHHHHHHHTSCCTTTEEEESSCGGGGTCEEESCHHHHHTTCSEE
T ss_pred             hhhhcCCeEEEEeCCHHHHHHHHhcCCchhhcchHHHHHHHHHHhccCCccchhhcCCHHHCCCEEECCHHHHHhcCCeE
Confidence            5788899999999997653 22211                                    1356678999999999999


Q ss_pred             EEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEee-cccCCHHHHhcCceEEEecCC
Q psy755           51 ISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDA-PVSGGTKAAQEATLTFMVGGD  129 (183)
Q Consensus        51 i~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~g~  129 (183)
                      |+++|.++....++   +++.+.++++++|+|+|+..+.....+.+.+.+++++|++. |+.+ +. ...+..++..+++
T Consensus       146 I~~vP~~~~v~~Vi---~~I~~~l~~g~Iiid~STi~~~~~~~l~e~l~~kgi~vi~~hp~a~-pe-~~g~~li~~~~as  220 (242)
T d2b0ja2         146 ITWLPKGNKQPDII---KKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGCV-PE-MKGQVYIAEGYAS  220 (242)
T ss_dssp             EECCTTCTTHHHHH---HHHGGGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECBCSSC-TT-TCCCEEEEESSSC
T ss_pred             EEeeecHHHHHHHH---HHHHhhCCCCcEEEecCCCcHHHHHHHHHhcccCCCEEECCCccCc-Cc-cccceEEecCCCC
Confidence            99999988888888   89999999999999999999999999999998899999984 4443 32 2233334555689


Q ss_pred             HHHHHHHHHHHHHhcCCeEEe
Q psy755          130 KSSLEKAKPILKCMGRNIVHC  150 (183)
Q Consensus       130 ~~~~~~~~~l~~~~g~~~~~~  150 (183)
                      ++.++++.++|+++|++.+++
T Consensus       221 eE~iekv~elles~Gk~~~vv  241 (242)
T d2b0ja2         221 EEAVNKLYEIGKIARGKAFKM  241 (242)
T ss_dssp             HHHHHHHHHHHHHHHSCEEEE
T ss_pred             HHHHHHHHHHHHHHCCCeEeC
Confidence            999999999999999988764

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=1.3e-15  Score=107.95  Aligned_cols=142  Identities=15%  Similarity=0.246  Sum_probs=104.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH-----------c------------------CCcccCCHHHHhccCCEEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK-----------E------------------GANMALSLSTLASGAEFII   51 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~-----------~------------------g~~~~~~~~~~~~~adiVi   51 (183)
                      ||++||..++++||+|++||++++.++++.+           .                  .+....+..+++.+||+|+
T Consensus        15 mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~d~~~a~~~ad~Vi   94 (192)
T d1f0ya2          15 MGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVV   94 (192)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHHHHTTSCSEEE
T ss_pred             HHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccccchhHhhhcccceeh
Confidence            8999999999999999999999987654322           1                  1335667788899999999


Q ss_pred             EecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEec--
Q psy755           52 SMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMVG--  127 (183)
Q Consensus        52 ~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~--  127 (183)
                      .|+|....+|.-+|  .++.+..+++.++...|++.+.+..+-....+++  |.||++.|...        +++-++.  
T Consensus        95 Eav~E~l~~K~~v~--~~l~~~~~~~~ilasnTS~l~i~~la~~~~~p~r~ig~HffnP~~~~--------~lVEIv~g~  164 (192)
T d1f0ya2          95 EAIVENLKVKNELF--KRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVM--------KLVEVIKTP  164 (192)
T ss_dssp             ECCCSCHHHHHHHH--HHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTC--------CEEEEECCT
T ss_pred             hhcccchhHHHHHH--HHHhhhcccCceeeccCcccccchhhhhccCHhHEEeeccccccCcc--------cEEEEcCCC
Confidence            99999999988776  8888999899988877776665542222222222  56666643221        1233333  


Q ss_pred             -CCHHHHHHHHHHHHHhcCCeEEeCC
Q psy755          128 -GDKSSLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus       128 -g~~~~~~~~~~l~~~~g~~~~~~g~  152 (183)
                       .+++.++.+.++++.+|+.++.+.+
T Consensus       165 ~T~~~~i~~~~~~~~~lgk~pV~v~D  190 (192)
T d1f0ya2         165 MTSQKTFESLVDFSKALGKHPVSCKD  190 (192)
T ss_dssp             TCCHHHHHHHHHHHHHTTCEEEEECS
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeec
Confidence             4789999999999999999988764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=99.58  E-value=1.7e-14  Score=98.48  Aligned_cols=133  Identities=14%  Similarity=0.212  Sum_probs=97.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||.+|+++|.++|++|++|+|++++.+.+.+. |+....++.++++.||+||+|+++ +.++.++       +.++++++
T Consensus        11 mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilavkp-~~~~~vl-------~~l~~~~~   82 (152)
T d2ahra2          11 MASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKP-QLFETVL-------KPLHFKQP   82 (152)
T ss_dssp             HHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCG-GGHHHHH-------TTSCCCSC
T ss_pred             HHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeecch-HhHHHHh-------hhccccee
Confidence            79999999999999999999999998887654 888888999999999999999975 6677775       34677888


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEe-ecccCCHHHHhcCceEEEecC--CHHHHHHHHHHHHHhcCC
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLD-APVSGGTKAAQEATLTFMVGG--DKSSLEKAKPILKCMGRN  146 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~g~~  146 (183)
                      |++..+...  ...+.+.+.. +.+++. +|  ..+.....+...+..+.  +++..+.++++|+.+|..
T Consensus        83 iis~~agi~--~~~l~~~l~~-~~~ivr~mP--N~~~~v~~g~~~~~~~~~~~~~~~~~v~~l~~~~G~~  147 (152)
T d2ahra2          83 IISMAAGIS--LQRLATFVGQ-DLPLLRIMP--NMNAQILQSSTALTGNALVSQELQARVRDLTDSFGST  147 (152)
T ss_dssp             EEECCTTCC--HHHHHHHHCT-TSCEEEEEC--CGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTEEE
T ss_pred             Eeccccccc--HHHHHhhhcc-cccchhhcc--chhhhcCccceEEEeCCCCCHHHHHHHHHHHHhCCCE
Confidence            887766543  3345555432 234444 23  33333344443333332  688899999999999974

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=99.49  E-value=8e-15  Score=103.40  Aligned_cols=141  Identities=16%  Similarity=0.188  Sum_probs=99.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-----------C-------------CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-----------G-------------ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-----------g-------------~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      ||++||..++++|++|++||++++.+++..+.           +             +....+. +.+.+||+||.++|.
T Consensus        15 mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~adlViEav~E   93 (186)
T d1wdka3          15 MGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDFGNVDLVVEAVVE   93 (186)
T ss_dssp             HHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTGGGCSEEEECCCS
T ss_pred             HHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeeccccc-ccccccceeeeeecc
Confidence            89999999999999999999999876654331           1             2223233 346789999999999


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--CCcEEeecccCCHHHHhcCceEEEe---cCCHH
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--QITFLDAPVSGGTKAAQEATLTFMV---GGDKS  131 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~  131 (183)
                      ...++.-+|  .++.+..+++.++...|++.+.+..+-.-..+++  |.||.+.|..        -+++-++   ..+++
T Consensus        94 ~l~~K~~lf--~~l~~~~~~~~IiaSnTS~l~i~~la~~~~~p~r~~g~Hf~nP~~~--------~~lVEiv~~~~T~~~  163 (186)
T d1wdka3          94 NPKVKQAVL--AEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHM--------MPLVEVIRGEKSSDL  163 (186)
T ss_dssp             CHHHHHHHH--HHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTT--------CCEEEEEECSSCCHH
T ss_pred             hHHHHHHHH--HHHHhhcCCCeeEEeccccccHHHHHHhccCchheEeeccccCccc--------CCeEEECCCCCCCHH
Confidence            999988776  8888999999998877777666542222111122  4455442211        1123222   35889


Q ss_pred             HHHHHHHHHHHhcCCeEEeCC
Q psy755          132 SLEKAKPILKCMGRNIVHCGD  152 (183)
Q Consensus       132 ~~~~~~~l~~~~g~~~~~~g~  152 (183)
                      .++.+.++++.+|+.++.+.+
T Consensus       164 ~~~~~~~~~~~lgk~pv~v~d  184 (186)
T d1wdka3         164 AVATTVAYAKKMGKNPIVVND  184 (186)
T ss_dssp             HHHHHHHHHHHTTCEEEEEES
T ss_pred             HHHHHHHHHHHcCCEEEEEec
Confidence            999999999999999988754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=99.48  E-value=1.2e-13  Score=94.20  Aligned_cols=135  Identities=18%  Similarity=0.246  Sum_probs=95.2

Q ss_pred             CcHHHHHHHHhCC-CcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNG-HDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||.+|+++|.+.| ++|++|||++++.+.+.+. ++...++.++ ++++|+||++++ |+.+..++   +++.   ..++
T Consensus        11 MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~-v~~~Div~lavk-P~~~~~v~---~~l~---~~~~   82 (152)
T d1yqga2          11 MAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPE-LHSDDVLILAVK-PQDMEAAC---KNIR---TNGA   82 (152)
T ss_dssp             HHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCC-CCTTSEEEECSC-HHHHHHHH---TTCC---CTTC
T ss_pred             HHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccccccccc-ccccceEEEecC-HHHHHHhH---HHHh---hccc
Confidence            7999999998877 8999999999999998875 6666666655 578999999997 57788887   5554   3578


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecC--CHHHHHHHHHHHHHhcCCe
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGG--DKSSLEKAKPILKCMGRNI  147 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~l~~~~g~~~  147 (183)
                      ++++..+..+.  ..+.+.+.. ..+ +-..+...+.....|...+..+.  +++..+.++++|+.+|...
T Consensus        83 ~viS~~ag~~~--~~l~~~l~~-~~~-iir~mpn~p~~~~~g~t~~~~~~~~~~~~~~~v~~l~~~~G~~~  149 (152)
T d1yqga2          83 LVLSVAAGLSV--GTLSRYLGG-TRR-IVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTV  149 (152)
T ss_dssp             EEEECCTTCCH--HHHHHHTTS-CCC-EEEEECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEEE
T ss_pred             EEeecccCCCH--HHHHHHhCc-Ccc-eEeecccchhHhcCCcEEEEeCCCCCHHHHHHHHHHHHhCCCEE
Confidence            88876665543  345554432 122 33334455555556653344332  5788899999999999744

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.38  E-value=1.8e-11  Score=87.00  Aligned_cols=149  Identities=13%  Similarity=0.076  Sum_probs=103.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc--------------------CCcccCCHHHHhccCCEEEEecCChH--
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE--------------------GANMALSLSTLASGAEFIISMLPASQ--   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~--------------------g~~~~~~~~~~~~~adiVi~~vp~~~--   58 (183)
                      +|.++|..|+++||+|++||.++++++.+.+.                    .....++..++++++|++|+|+|.|.  
T Consensus        11 vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~i~i~VpTP~~~   90 (202)
T d1mv8a2          11 VGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVSFICVGTPSKK   90 (202)
T ss_dssp             THHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEEEECCCCCBCT
T ss_pred             hHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCEEEEecCccccc
Confidence            58999999999999999999999988876542                    12456788888999999999999752  


Q ss_pred             -------HHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc--------CCcEEeecccCCH--H--HHhc
Q psy755           59 -------DVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK--------QITFLDAPVSGGT--K--AAQE  119 (183)
Q Consensus        59 -------~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~--~--~~~~  119 (183)
                             .+..++.....+.....++++|+..|++.|.+.+.+...+-+.        .+++..+|-+-.+  .  ....
T Consensus        91 ~~~~d~~~~~~~~~~i~~~~~~~~~~~liii~STv~pGtt~~~~~~~l~~~~~~~~~~~~~~~~~PE~~~~G~a~~d~~~  170 (202)
T d1mv8a2          91 NGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDF  170 (202)
T ss_dssp             TSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHS
T ss_pred             cccccchhhhhhhhhhhheeecccCCcceeeccccCCcchhhhhhhhhhccccccccccccchhhhhhhcccchhhhhcC
Confidence                   1223320002333456688999999999999988776544321        2456667754432  1  1222


Q ss_pred             CceEEEecCCHHHHHHHHHHHHHhcCCeEE
Q psy755          120 ATLTFMVGGDKSSLEKAKPILKCMGRNIVH  149 (183)
Q Consensus       120 ~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~  149 (183)
                      .+..++-+.+++..+.++++++.+..+.+.
T Consensus       171 ~~~iViG~~~~~~~~~~~~ly~~i~~~ii~  200 (202)
T d1mv8a2         171 PPMTVIGELDKQTGDLLEEIYRELDAPIIR  200 (202)
T ss_dssp             CSCEEEEESSHHHHHHHHHHHTTSSSCEEE
T ss_pred             CCeEEEEeCCHHHHHHHHHHHHhcCCCeEe
Confidence            332344445788889999999998776553

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=99.36  E-value=3e-13  Score=95.36  Aligned_cols=139  Identities=16%  Similarity=0.164  Sum_probs=99.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC--------------CcccCCHHHHhccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG--------------ANMALSLSTLASGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g--------------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||.++|..|+++||+|.+|+|+++.++.+.+.+              +...++++++++++|+||+++|. +.++.++  
T Consensus        18 wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiavPs-~~~~~~~--   94 (189)
T d1n1ea2          18 FGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT-QFLRGFF--   94 (189)
T ss_dssp             HHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECSCH-HHHHHHH--
T ss_pred             HHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEEcCcH-HHHHHHH--
Confidence            799999999999999999999999988887532              34566789999999999999987 6677777  


Q ss_pred             Ccccccc-----CCCCcEEEeccCCC-chhHHHHHHHHHhc----CCcEEeecccCCHHHHhcCceEEEecCCHHHHHHH
Q psy755           67 SDGILKH-----AKPGVIVIDSSTVD-PQVPQTLSNLAREK----QITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKA  136 (183)
Q Consensus        67 ~~~l~~~-----l~~~~iiid~s~~~-~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  136 (183)
                       +++.+.     ++++..++.++.+. +.+...+.+.+.+.    .+.++.+|-+......+....+.+.+.+.+..+.+
T Consensus        95 -~~~~~~~~~~~~~~~~~ii~~tKGie~~t~~~~seii~e~~~~~~~~vlsGP~~A~Ev~~~~pt~~viAs~~~~~a~~i  173 (189)
T d1n1ea2          95 -EKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIASADINVARRL  173 (189)
T ss_dssp             -HHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHTTCCEEEEEECSSHHHHHHH
T ss_pred             -HHHHhhhhhhhccCCcEEEEEECCCccCCccchhhHHHHHhcccceEEEecCCcHHHHHcCCCcEEEEEeCCHHHHHHH
Confidence             666653     45677788887654 34333344444332    23455555554444444455566667788888899


Q ss_pred             HHHHHHh
Q psy755          137 KPILKCM  143 (183)
Q Consensus       137 ~~l~~~~  143 (183)
                      +++|+.-
T Consensus       174 ~~lfst~  180 (189)
T d1n1ea2         174 QRIMSTG  180 (189)
T ss_dssp             HHHHSCT
T ss_pred             HHHhCCC
Confidence            9998753

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=99.28  E-value=1.5e-11  Score=85.71  Aligned_cols=96  Identities=17%  Similarity=0.265  Sum_probs=76.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC---------------CcccCCHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG---------------ANMALSLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g---------------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||.++|..|+++||+|++|+|++++.+.+.+.+               ....+++.++++++|+||+++|... .+.++ 
T Consensus        12 ~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v~~~~-~~~~~-   89 (184)
T d1bg6a2          12 GGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVPAIH-HASIA-   89 (184)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSCGGG-HHHHH-
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEEchhH-HHHHH-
Confidence            799999999999999999999999999887643               2235678999999999999998854 67777 


Q ss_pred             CCccccccCCCCcEEEeccCCCchhHHHHHHHHHhc
Q psy755           66 GSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREK  101 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~  101 (183)
                        +++.+++.++++|+..++...... .....+...
T Consensus        90 --~~i~~~l~~~~~iv~~~g~~~~~~-~~~~~~~~~  122 (184)
T d1bg6a2          90 --ANIASYISEGQLIILNPGATGGAL-EFRKILREN  122 (184)
T ss_dssp             --HHHGGGCCTTCEEEESSCCSSHHH-HHHHHHHHT
T ss_pred             --HHhhhccCCCCEEEEeCCCCccHH-HHHHHHHHh
Confidence              899999999999886665554443 444555544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.23  E-value=7.4e-12  Score=87.46  Aligned_cols=144  Identities=19%  Similarity=0.180  Sum_probs=93.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc--hhHHHHHHcC-------------CcccCCHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT--DASQTLAKEG-------------ANMALSLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~--~~~~~~~~~g-------------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||.++|..|+++|++|.+|.|+.  +.++.+.+.+             +...+++.++++++|+|++++|. +.++.++ 
T Consensus        11 ~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avps-~~~~~~~-   88 (180)
T d1txga2          11 MGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVST-DGVLPVM-   88 (180)
T ss_dssp             HHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCG-GGHHHHH-
T ss_pred             HHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcccch-hhhHHHH-
Confidence            79999999999999999998854  4456655431             23356788899999999999987 6788887 


Q ss_pred             CCccccccCCCCcEEEeccCCCchhH--HHHHHHHHhc-C-----CcEEeecccCCHHHHhcCceEEEecCCHHHHHHHH
Q psy755           66 GSDGILKHAKPGVIVIDSSTVDPQVP--QTLSNLAREK-Q-----ITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAK  137 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~~~~~~~--~~~~~~~~~~-g-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  137 (183)
                        +++.+.+++..+++.+.+..+...  ..+.+.+.+. +     ..++.+|-+......+.....++.+.+.+..+.++
T Consensus        89 --~~l~~~l~~~~ii~~tkg~~~~~~~~~~~~~~~~~~~~~~~~~~~vlsGP~~A~Ei~~~~pt~~vias~~~~~a~~i~  166 (180)
T d1txga2          89 --SRILPYLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREVAKRMPTTVVFSSPSESSANKMK  166 (180)
T ss_dssp             --HHHTTTCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHHHTTCCEEEEEECSCHHHHHHHH
T ss_pred             --HhhccccccceecccccCccccccccccchHHHHhhhcccccceeEEcCCccHHHHHcCCCcEEEEEcCCHHHHHHHH
Confidence              889998866555543333321111  1123333322 1     22344554444333334555666777888888899


Q ss_pred             HHHHHhcCCeE
Q psy755          138 PILKCMGRNIV  148 (183)
Q Consensus       138 ~l~~~~g~~~~  148 (183)
                      ++|+.=..+++
T Consensus       167 ~~f~~~~frvy  177 (180)
T d1txga2         167 EIFETEYFGVE  177 (180)
T ss_dssp             HHHCBTTEEEE
T ss_pred             HHHCCCCEEEE
Confidence            98875444443

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=98.88  E-value=2.1e-09  Score=75.36  Aligned_cols=102  Identities=18%  Similarity=0.230  Sum_probs=86.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|.+||+...........+....+++.++++.||+|++++|....++.++.  ++....+++|.++
T Consensus        58 IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~plt~~T~~li~--~~~l~~mk~~a~l  135 (191)
T d1gdha1          58 IGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN--KATIKSLPQGAIV  135 (191)
T ss_dssp             HHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS--HHHHTTSCTTEEE
T ss_pred             chHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHhhCCeEEecCCCCchHhheec--HHHhhCcCCccEE
Confidence            48899999999999999999887655555555666778999999999999999999888888773  6778889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      |+++.....+..++.+.+....+.
T Consensus       136 IN~sRG~ivde~aL~~aL~~g~i~  159 (191)
T d1gdha1         136 VNTARGDLVDNELVVAALEAGRLA  159 (191)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSEE
T ss_pred             EecCCccchhhHHHHHHHHcCCce
Confidence            999999999999999988876443

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=98.85  E-value=2.1e-09  Score=75.24  Aligned_cols=100  Identities=10%  Similarity=0.084  Sum_probs=86.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|..||+...........+.....++.+++++||+|++++|.....+.++.  ++....+++|.++
T Consensus        55 IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~T~~li~--~~~l~~mk~ga~l  132 (188)
T d2naca1          55 IGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIN--DETLKLFKRGAYI  132 (188)
T ss_dssp             HHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBS--HHHHTTSCTTEEE
T ss_pred             cchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccccchhhhH--HHHHHhCCCCCEE
Confidence            47889999999999999999877655555555777788999999999999999999988888773  7778899999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      |+++...-.+..++.+.+....
T Consensus       133 IN~aRG~ivd~~aL~~aL~~g~  154 (188)
T d2naca1         133 VNTARGKLCDRDAVARALESGR  154 (188)
T ss_dssp             EECSCGGGBCHHHHHHHHHTTS
T ss_pred             EecCchhhhhHHHHHHHHhCCC
Confidence            9999999999999998887753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=98.82  E-value=2.6e-09  Score=74.20  Aligned_cols=95  Identities=12%  Similarity=0.143  Sum_probs=80.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|.+|||++..      ......+++++++++||+|++++|.....+.++.  ++..+.++++.++
T Consensus        53 IG~~va~~l~~~g~~v~~~d~~~~~------~~~~~~~~l~ell~~sDiv~~~~pl~~~t~~li~--~~~l~~mk~~ail  124 (181)
T d1qp8a1          53 IGTRVGKILAALGAQVRGFSRTPKE------GPWRFTNSLEEALREARAAVCALPLNKHTRGLVK--YQHLALMAEDAVF  124 (181)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCC------SSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBC--HHHHTTSCTTCEE
T ss_pred             ccccceeeeeccccccccccccccc------cceeeeechhhhhhccchhhcccccccccccccc--cceeeeccccceE
Confidence            5889999999999999999998753      1234567899999999999999999888888773  6778889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      |+++...-.+..++.+.+.+..+
T Consensus       125 IN~~RG~ivd~~aL~~aL~~~~i  147 (181)
T d1qp8a1         125 VNVGRAEVLDRDGVLRILKERPQ  147 (181)
T ss_dssp             EECSCGGGBCHHHHHHHHHHCTT
T ss_pred             EeccccccccchhhhhhcccCcE
Confidence            99999988888899988887643

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=98.78  E-value=5.9e-09  Score=73.10  Aligned_cols=99  Identities=14%  Similarity=0.170  Sum_probs=82.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|.+||+....- .....+.....+++++++.||+|++++|.....+.++  ..+....++++.++
T Consensus        60 IG~~va~~l~~fg~~v~~~d~~~~~~-~~~~~~~~~~~~l~~ll~~sD~i~~~~plt~~T~~li--~~~~l~~mk~~a~l  136 (193)
T d1mx3a1          60 VGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLI--NDFTVKQMRQGAFL  136 (193)
T ss_dssp             HHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSB--SHHHHTTSCTTEEE
T ss_pred             ccccceeeeeccccceeeccCccccc-chhhhccccccchhhccccCCEEEEeecccccchhhh--hHHHHhccCCCCeE
Confidence            48899999999999999999876542 2233466777899999999999999999988777776  36667889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      |+++...-.+..++.+.+....
T Consensus       137 IN~sRG~ivde~aL~~aL~~~~  158 (193)
T d1mx3a1         137 VNTARGGLVDEKALAQALKEGR  158 (193)
T ss_dssp             EECSCTTSBCHHHHHHHHHHTS
T ss_pred             EecCCceEEcHHHHHHHHHcCC
Confidence            9999999999999999888754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.77  E-value=8.3e-09  Score=71.83  Aligned_cols=99  Identities=24%  Similarity=0.388  Sum_probs=81.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|++||+...... ....+.. ..+++++++.||+|++++|....++.++  ..+....++++.++
T Consensus        55 IG~~va~~~~~fg~~v~~~d~~~~~~~-~~~~~~~-~~~l~ell~~sDiv~~~~Plt~~T~~li--n~~~l~~mk~~a~l  130 (184)
T d1ygya1          55 IGQLVAQRIAAFGAYVVAYDPYVSPAR-AAQLGIE-LLSLDDLLARADFISVHLPKTPETAGLI--DKEALAKTKPGVII  130 (184)
T ss_dssp             HHHHHHHHHHTTTCEEEEECTTSCHHH-HHHHTCE-ECCHHHHHHHCSEEEECCCCSTTTTTCB--CHHHHTTSCTTEEE
T ss_pred             hhHHHHHHhhhccceEEeecCCCChhH-HhhcCce-eccHHHHHhhCCEEEEcCCCCchhhhhh--hHHHHhhhCCCceE
Confidence            478899999999999999998876533 2333444 4589999999999999999998888877  36777889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      |+++...-.+..++.+.+....+
T Consensus       131 IN~sRG~iVde~aL~~aL~~~~i  153 (184)
T d1ygya1         131 VNAARGGLVDEAALADAITGGHV  153 (184)
T ss_dssp             EECSCTTSBCHHHHHHHHHTSSE
T ss_pred             EEecchhhhhhHHHHHHHhcCcE
Confidence            99999999999999998887643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=98.66  E-value=2.4e-08  Score=70.11  Aligned_cols=98  Identities=19%  Similarity=0.213  Sum_probs=80.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|.+||+.......  ..+ ....++.++++.||+|++++|.....+.++  .++....++++.++
T Consensus        54 IG~~va~~l~~fg~~V~~~d~~~~~~~~--~~~-~~~~~l~~~l~~sDii~~~~plt~~T~~li--~~~~l~~mk~~a~l  128 (197)
T d1j4aa1          54 IGQVFMQIMEGFGAKVITYDIFRNPELE--KKG-YYVDSLDDLYKQADVISLHVPDVPANVHMI--NDESIAKMKQDVVI  128 (197)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCHHHH--HTT-CBCSCHHHHHHHCSEEEECSCCCGGGTTCB--SHHHHHHSCTTEEE
T ss_pred             cchhHHHhHhhhcccccccCcccccccc--cce-eeeccccccccccccccccCCccccccccc--cHHHHhhhCCccEE
Confidence            5889999999999999999987654222  223 345689999999999999999988887776  36667889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      |+++.....+..++.+.+...-+
T Consensus       129 IN~sRG~ivde~aL~~aL~~~~i  151 (197)
T d1j4aa1         129 VNVSRGPLVDTDAVIRGLDSGKI  151 (197)
T ss_dssp             EECSCGGGBCHHHHHHHHHHTSE
T ss_pred             EecCchhhhhhHHHHHHHhcccc
Confidence            99999998898899888877543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.62  E-value=6.3e-08  Score=67.04  Aligned_cols=168  Identities=14%  Similarity=0.161  Sum_probs=87.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-------CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCC--cccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-------GANMALSLSTLASGAEFIISMLPASQDVLDAYDGS--DGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~--~~l~   71 (183)
                      ||++||+.|+++||+|++|+|++++++.+.+.       ......+........+....+.+............  ....
T Consensus        12 iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (212)
T d1jaya_          12 LGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILREK   91 (212)
T ss_dssp             HHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHHHHTHHHHTTS
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHHHHhhhhhccc
Confidence            79999999999999999999999998877654       12223344555556677777775543333221000  0000


Q ss_pred             ccCCCCcEEEecc-----CCCchhHHHHHHHHHhcCCcEEeecccCCHHHHh----cCceEEEecCCHHHHHHH-HHHHH
Q psy755           72 KHAKPGVIVIDSS-----TVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQ----EATLTFMVGGDKSSLEKA-KPILK  141 (183)
Q Consensus        72 ~~l~~~~iiid~s-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~~~-~~l~~  141 (183)
                      ..........+..     .............+.... ......+.+.+....    ........+.+......+ +.+.+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~a~~~~~~~~~~  170 (212)
T d1jaya_          92 IVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLESEK-VVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISE  170 (212)
T ss_dssp             EEEECCCCEECCTTCCEECCSSCHHHHHHHHHTCSC-EEECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccchhhhhhhhhhhhhc-ccccceeecHHHhcCcccccCccceEEeCCHHHHHHHHHHHhh
Confidence            1111111111100     111122223333332221 111111222221111    122234455666655554 44666


Q ss_pred             HhcCCeEEeCCcchHHHHHHHHHHHHHH
Q psy755          142 CMGRNIVHCGDSGNGQVAKLCNNMLLGV  169 (183)
Q Consensus       142 ~~g~~~~~~g~~g~a~~~k~~~~~~~~~  169 (183)
                      .+|.++++.|+...+..+|.+.+.+.+.
T Consensus       171 ~~g~~~~~~G~l~~a~~~e~~~~l~~~~  198 (212)
T d1jaya_         171 IDGLRPLDAGPLSNSRLVESLTPLILNI  198 (212)
T ss_dssp             STTEEEEEEESGGGHHHHHTHHHHHHHH
T ss_pred             CCCeEEEEeChHHHHHHHHhHHHHHHHH
Confidence            6899999999999998888777665444

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.58  E-value=2.5e-08  Score=69.58  Aligned_cols=96  Identities=18%  Similarity=0.210  Sum_probs=80.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|++||+......    .......+++++++.||+|++++|.....+.++  .++..+.++++.++
T Consensus        55 IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~~~~~~l~ell~~sDii~i~~plt~~T~~li--~~~~l~~mk~~a~l  128 (188)
T d1sc6a1          55 IGTQLGILAESLGMYVYFYDIENKLPL----GNATQVQHLSDLLNMSDVVSLHVPENPSTKNMM--GAKEISLMKPGSLL  128 (188)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCCCC----TTCEECSCHHHHHHHCSEEEECCCSSTTTTTCB--CHHHHHHSCTTEEE
T ss_pred             chhhhhhhcccccceEeeccccccchh----hhhhhhhhHHHHHhhccceeecccCCcchhhhc--cHHHHhhCCCCCEE
Confidence            478899999999999999998765321    133445689999999999999999988888877  37778889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcC
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g  102 (183)
                      |+++...-.+..++.+.+....
T Consensus       129 IN~aRG~lvde~aL~~aL~~~~  150 (188)
T d1sc6a1         129 INASRGTVVDIPALADALASKH  150 (188)
T ss_dssp             EECSCSSSBCHHHHHHHHHTTS
T ss_pred             EEcCcHHhhhhHHHHHHHHcCC
Confidence            9999999999999999887753

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=98.58  E-value=5.2e-08  Score=68.51  Aligned_cols=98  Identities=18%  Similarity=0.235  Sum_probs=79.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|++||+.+....    .......+++++++.||+|++++|.....+.++.  .+....++++.++
T Consensus        56 IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~~~~~~l~~l~~~~D~v~~~~plt~~T~~li~--~~~l~~mk~~a~l  129 (199)
T d1dxya1          56 IGQVAIKLFKGFGAKVIAYDPYPMKGD----HPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIIN--EAAFNLMKPGAIV  129 (199)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCSSC----CTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBC--HHHHHHSCTTEEE
T ss_pred             ccccccccccccceeeeccCCccchhh----hcchhHHHHHHHHHhcccceeeeccccccccccc--HHHhhccCCceEE
Confidence            488999999999999999998765421    1122345899999999999999999988888763  6677889999999


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCc
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      |+++...-.+..++.+.+....+.
T Consensus       130 IN~aRG~vvde~aL~~aL~~g~i~  153 (199)
T d1dxya1         130 INTARPNLIDTQAMLSNLKSGKLA  153 (199)
T ss_dssp             EECSCTTSBCHHHHHHHHHTTSEE
T ss_pred             EecccHhhhhhHHHHHHHhcCCcc
Confidence            999999999988999888765433

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.57  E-value=5.5e-09  Score=71.18  Aligned_cols=85  Identities=13%  Similarity=0.122  Sum_probs=65.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC-------CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG-------ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g-------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      ||+.+|..|++.||+|++|+|++++.+.....+       .....+..+....+|+||+++|. .+++.++   +.+.+.
T Consensus        11 iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka-~~~~~~~---~~l~~~   86 (167)
T d1ks9a2          11 LGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKA-WQVSDAV---KSLAST   86 (167)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCG-GGHHHHH---HHHHTT
T ss_pred             HHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecc-cchHHHH---Hhhccc
Confidence            799999999999999999999998655433221       12223455667899999999987 4567766   888899


Q ss_pred             CCCCcEEEeccCCCch
Q psy755           74 AKPGVIVIDSSTVDPQ   89 (183)
Q Consensus        74 l~~~~iiid~s~~~~~   89 (183)
                      +.++++|+.+.+....
T Consensus        87 ~~~~~~Iv~~qNG~~~  102 (167)
T d1ks9a2          87 LPVTTPILLIHNGMGT  102 (167)
T ss_dssp             SCTTSCEEEECSSSCT
T ss_pred             cCcccEEeeccCcccH
Confidence            9999999988876543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=98.40  E-value=5.6e-07  Score=62.77  Aligned_cols=104  Identities=13%  Similarity=0.138  Sum_probs=70.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc------------------CCcccCCHHHHhccCCEEEEecCChHHHH-
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE------------------GANMALSLSTLASGAEFIISMLPASQDVL-   61 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~------------------g~~~~~~~~~~~~~adiVi~~vp~~~~~~-   61 (183)
                      +|.++|..|+ .||+|++||.++++++.+...                  ......+......++|++++++|.+..-+ 
T Consensus        11 vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~g~~p~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~ii~v~vpt~~~~~~   89 (196)
T d1dlja2          11 VGLSLGVLLS-LQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVIIATPTNYNSRI   89 (196)
T ss_dssp             HHHHHHHHHT-TTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEECCCCCEETTT
T ss_pred             hHHHHHHHHH-CCCcEEEEECCHHHHHHHhhcccccchhhHHHHhhhhhhhhhccchhhhhhhccccccccCCccccccC
Confidence            4788998776 599999999999998877642                  11223345555678999999999874321 


Q ss_pred             ---------HHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeeccc
Q psy755           62 ---------DAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPVS  111 (183)
Q Consensus        62 ---------~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~  111 (183)
                               ...   +.+. ...++.+++-.|+..|.+.+.+.......  ++..+|-+
T Consensus        90 ~~~~~~~v~~~~---~~~~-~~~~~~~iii~Stv~pgt~~~~~~~~~~~--~~~~~PE~  142 (196)
T d1dlja2          90 NYFDTQHVETVI---KEVL-SVNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEF  142 (196)
T ss_dssp             TEECCHHHHHHH---HHHH-HHCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCC
T ss_pred             CCcceeEEeehh---hhhh-hcccceeEEeeeecCceeeeeeeeccchh--hhccchhh
Confidence                     111   1222 33577888999999999988877665443  45555533

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.34  E-value=1.1e-06  Score=57.35  Aligned_cols=98  Identities=16%  Similarity=0.192  Sum_probs=65.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc-------ccCCHHHH-hccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN-------MALSLSTL-ASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~-------~~~~~~~~-~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      +|+.+|+.|.+.|++|+++|.++++++++...+..       ..+.+.++ +.++|.||+++++......++   .....
T Consensus        11 ~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~~~~---~~~~~   87 (134)
T d2hmva1          11 FGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLT---TLLLK   87 (134)
T ss_dssp             HHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHHHHH---HHHHH
T ss_pred             HHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhHHHH---HHHHH
Confidence            48899999999999999999999999998776521       12233333 678999999999765544443   34445


Q ss_pred             cCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           73 HAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+...+++-..+      ....+.+...|..++-
T Consensus        88 ~~~~~~iiar~~~------~~~~~~l~~~Gad~vi  116 (134)
T d2hmva1          88 ELDIPNIWVKAQN------YYHHKVLEKIGADRII  116 (134)
T ss_dssp             HTTCSEEEEECCS------HHHHHHHHHHTCSEEE
T ss_pred             HcCCCcEEeeccc------HhHHHHHHHCCCCEEE
Confidence            5555555553332      1224445556765443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.29  E-value=1e-06  Score=60.03  Aligned_cols=99  Identities=18%  Similarity=0.229  Sum_probs=70.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcC---------CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEG---------ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g---------~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||..+|+.|.+.||+|+++||+.++++.+.+..         ........+.+...|+++.++|........       .
T Consensus        13 ~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~~-------~   85 (182)
T d1e5qa1          13 VTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHATVI-------K   85 (182)
T ss_dssp             THHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGHHHHH-------H
T ss_pred             HHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhhhHHH-------H
Confidence            799999999999999999999999999987752         111123445677899999999875543322       2


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      .....+..++|.+...+ ....+.+.....+..++.
T Consensus        86 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~  120 (182)
T d1e5qa1          86 SAIRQKKHVVTTSYVSP-AMMELDQAAKDAGITVMN  120 (182)
T ss_dssp             HHHHHTCEEECSSCCCH-HHHHTHHHHHHTTCEEEC
T ss_pred             HHHhhccceeecccCcH-HHHHHHHHhccccceeeh
Confidence            34456778888776544 445666666666666665

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.10  E-value=1.2e-06  Score=59.06  Aligned_cols=81  Identities=22%  Similarity=0.398  Sum_probs=57.8

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CC--cccCCHHHHhccCCEEEEecCChHHH--HHHhcCCcccccc-
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GA--NMALSLSTLASGAEFIISMLPASQDV--LDAYDGSDGILKH-   73 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~--~~~~~~~~~~~~adiVi~~vp~~~~~--~~v~~~~~~l~~~-   73 (183)
                      ||..+++.|...|+ ++++++|+.++++.+.+. +.  ...+++.+.+.++|+||.|++.+..+  +..+   +..... 
T Consensus        35 ~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~atss~~~ii~~~~i---~~~~~~r  111 (159)
T d1gpja2          35 MGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIHVDDV---REALRKR  111 (159)
T ss_dssp             HHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBCHHHH---HHHHHHC
T ss_pred             HHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEecCCCCccccHhhh---HHHHHhc
Confidence            68899999999998 699999999998877665 53  33567788889999999999776432  2221   111111 


Q ss_pred             -CCCCcEEEecc
Q psy755           74 -AKPGVIVIDSS   84 (183)
Q Consensus        74 -l~~~~iiid~s   84 (183)
                       ..+..+++|++
T Consensus       112 ~~~~~~~iiDla  123 (159)
T d1gpja2         112 DRRSPILIIDIA  123 (159)
T ss_dssp             SSCCCEEEEECC
T ss_pred             ccCCCeEEEeec
Confidence             13455899986

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.10  E-value=9.2e-06  Score=54.88  Aligned_cols=76  Identities=22%  Similarity=0.284  Sum_probs=62.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch-hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      |.+=|.+|...|.+|++--|... +.+++.+.|.... +..|+++.+|+|++.+|+.. -..++.  +.+.|.+++|+.+
T Consensus        28 G~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~-~~~eA~~~aDiim~L~PD~~-q~~vy~--~~I~p~lk~g~~L  103 (182)
T d1np3a2          28 GHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEF-QGRLYK--EEIEPNLKKGATL  103 (182)
T ss_dssp             HHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHH-HHHHHH--HHTGGGCCTTCEE
T ss_pred             hHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccc-cHHHHhhhcCeeeeecchHH-HHHHHH--HhhhhhcCCCcEE
Confidence            56779999999999999877654 5677777887765 99999999999999999854 455551  4799999999987


Q ss_pred             E
Q psy755           81 I   81 (183)
Q Consensus        81 i   81 (183)
                      .
T Consensus       104 ~  104 (182)
T d1np3a2         104 A  104 (182)
T ss_dssp             E
T ss_pred             E
Confidence            6

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=9.9e-06  Score=54.40  Aligned_cols=89  Identities=16%  Similarity=0.183  Sum_probs=66.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|+.+|+.+...|.+|.+||++|.+.-.+.-.|.... +.++++..+|+++.++....    ++  ..+-.+.+++|.++
T Consensus        35 iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~-~~~~a~~~adivvtaTGn~~----vI--~~eh~~~MKdgaIL  107 (163)
T d1li4a1          35 VGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVT-TMDEACQEGNIFVTTTGCID----II--LGRHFEQMKDDAIV  107 (163)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CHHHHTTTCSEEEECSSCSC----SB--CHHHHTTCCTTEEE
T ss_pred             ccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEee-ehhhhhhhccEEEecCCCcc----ch--hHHHHHhccCCeEE
Confidence            4899999999999999999999976544444465544 88999999999999986533    22  13445789999999


Q ss_pred             EeccCCCch-hHHHHHH
Q psy755           81 IDSSTVDPQ-VPQTLSN   96 (183)
Q Consensus        81 id~s~~~~~-~~~~~~~   96 (183)
                      .+.+....+ +..++.+
T Consensus       108 ~N~Ghfd~EId~~~L~~  124 (163)
T d1li4a1         108 CNIGHFDVEIDVKWLNE  124 (163)
T ss_dssp             EECSSSTTSBCHHHHHH
T ss_pred             EEeccccceecHHHHhh
Confidence            998866544 4444544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.68  E-value=0.0002  Score=46.11  Aligned_cols=97  Identities=14%  Similarity=0.181  Sum_probs=62.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcc----cCCHH---HH-hccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANM----ALSLS---TL-ASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~----~~~~~---~~-~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      +|+.+++.|.+.|++|++.|.|+++++++.+. +...    ..+..   ++ ++++|.++.++++.+. .-..   ..+.
T Consensus        11 ~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~~-N~~~---~~~~   86 (132)
T d1lssa_          11 VGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV-NLMS---SLLA   86 (132)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH-HHHH---HHHH
T ss_pred             HHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHHH-HHHH---HHHH
Confidence            48899999999999999999999999988764 4322    11222   22 5689999999988543 2222   3334


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+....+|.-..+  +..    .+.+.+.|+.++-
T Consensus        87 k~~~~~~iI~~~~~--~~~----~~~l~~~G~d~vi  116 (132)
T d1lssa_          87 KSYGINKTIARISE--IEY----KDVFERLGVDVVV  116 (132)
T ss_dssp             HHTTCCCEEEECSS--TTH----HHHHHHTTCSEEE
T ss_pred             HHcCCceEEEEecC--HHH----HHHHHHCCCCEEE
Confidence            45666677654333  222    3455566765443

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=97.63  E-value=5.1e-05  Score=50.68  Aligned_cols=82  Identities=17%  Similarity=0.222  Sum_probs=64.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.+|+++...|-+|++++++|-++-.+.-.|... .+++++++.+|++|.++....    ++  ..+-.+.++.|.+|.
T Consensus        35 GrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v-~~~~~a~~~aDi~vTaTGn~~----vI--~~~h~~~MKdgaIl~  107 (163)
T d1v8ba1          35 GKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-VTLDEIVDKGDFFITCTGNVD----VI--KLEHLLKMKNNAVVG  107 (163)
T ss_dssp             HHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECCSSSS----SB--CHHHHTTCCTTCEEE
T ss_pred             chhHHHHHHhCCCEEEEEecCchhhHHHHhcCCcc-CchhHccccCcEEEEcCCCCc----cc--cHHHHHHhhCCeEEE
Confidence            88999999999999999999996654444456555 589999999999999997643    22  134456789999999


Q ss_pred             eccCCCchh
Q psy755           82 DSSTVDPQV   90 (183)
Q Consensus        82 d~s~~~~~~   90 (183)
                      +.+....+.
T Consensus       108 N~GHfd~EI  116 (163)
T d1v8ba1         108 NIGHFDDEI  116 (163)
T ss_dssp             ECSSTTTSB
T ss_pred             eccccchhh
Confidence            988776553

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.60  E-value=1.9e-05  Score=53.20  Aligned_cols=85  Identities=14%  Similarity=0.264  Sum_probs=60.0

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHc---CCcc----cCCHHHHhccCCEEEEecCChH-HHHHHhcCCcccccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKE---GANM----ALSLSTLASGAEFIISMLPASQ-DVLDAYDGSDGILKH   73 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~---g~~~----~~~~~~~~~~adiVi~~vp~~~-~~~~v~~~~~~l~~~   73 (183)
                      |..-++...+.|-+|+++|+++++.+.+...   ....    ...+.+.++++|+||-++-.+- ..+.++  .+++...
T Consensus        44 G~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~aP~lI--t~~mv~~  121 (168)
T d1pjca1          44 GTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPILV--PASLVEQ  121 (168)
T ss_dssp             HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCCCB--CHHHHTT
T ss_pred             HHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCcccCeee--cHHHHhh
Confidence            3444566778899999999999998877654   2222    1235677889999999984332 223333  3677788


Q ss_pred             CCCCcEEEeccCCCc
Q psy755           74 AKPGVIVIDSSTVDP   88 (183)
Q Consensus        74 l~~~~iiid~s~~~~   88 (183)
                      +++|.+|||.+....
T Consensus       122 Mk~GSVIVDvaidqG  136 (168)
T d1pjca1         122 MRTGSVIVDVAVDQG  136 (168)
T ss_dssp             SCTTCEEEETTCTTC
T ss_pred             cCCCcEEEEeecCCC
Confidence            999999999987543

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=97.57  E-value=0.00011  Score=51.15  Aligned_cols=78  Identities=19%  Similarity=0.227  Sum_probs=58.9

Q ss_pred             cHHHHHHHHhCC------CcEEEEcC-CchhHHHHHHcCCcc----cCCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            2 GSHMARNLLKNG------HDVIVYDK-NTDASQTLAKEGANM----ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g------~~V~~~~~-~~~~~~~~~~~g~~~----~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      |.+=|.+|...|      .+|.+.-| ...+.+++.+.|...    ..+..|+++.+|+|++.+|+.. -..++   +++
T Consensus        56 G~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~~ADiVmiLlPDe~-Q~~vy---~~I  131 (226)
T d1qmga2          56 APAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLISDSA-QADNY---EKV  131 (226)
T ss_dssp             HHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHHTCSEEEECSCHHH-HHHHH---HHH
T ss_pred             HHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHhhCCEEEEecchHH-HHHHH---HHH
Confidence            667789999854      55776544 345677888888652    3378899999999999999854 45566   779


Q ss_pred             cccCCCCcEEEec
Q psy755           71 LKHAKPGVIVIDS   83 (183)
Q Consensus        71 ~~~l~~~~iiid~   83 (183)
                      .|+|++|+.+.-.
T Consensus       132 ~p~Lk~G~~L~Fa  144 (226)
T d1qmga2         132 FSHMKPNSILGLS  144 (226)
T ss_dssp             HHHSCTTCEEEES
T ss_pred             HHhcCCCceeeec
Confidence            9999999988643

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.53  E-value=9.4e-05  Score=50.38  Aligned_cols=82  Identities=12%  Similarity=0.170  Sum_probs=56.7

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccC-----------------------------CHHHHhccCCEEEEe
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMAL-----------------------------SLSTLASGAEFIISM   53 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~-----------------------------~~~~~~~~adiVi~~   53 (183)
                      ..-++...+.|.+|+++|.++++.+++...+....+                             .+.+.+.++|+||.+
T Consensus        42 ~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l~~~l~~aDlVI~t  121 (183)
T d1l7da1          42 LQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITT  121 (183)
T ss_dssp             HHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHHHHHHTTCSEEEEC
T ss_pred             HHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHHHHHHHHhhhhheee
Confidence            344555667899999999999999988876532211                             122346789999988


Q ss_pred             cCChHH-HHHHhcCCccccccCCCCcEEEeccCC
Q psy755           54 LPASQD-VLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        54 vp~~~~-~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      +-.+-. .+.++  .+++...+++|.+|||.+..
T Consensus       122 alipG~~aP~li--t~~mv~~Mk~GSVIVDvaid  153 (183)
T d1l7da1         122 ALIPGKPAPVLI--TEEMVTKMKPGSVIIDLAVE  153 (183)
T ss_dssp             CCCTTSCCCCCS--CHHHHTTSCTTCEEEETTGG
T ss_pred             eecCCcccceee--hHHHHHhcCCCcEEEEEeec
Confidence            743321 12233  36777889999999999864

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.52  E-value=0.00023  Score=47.95  Aligned_cols=100  Identities=18%  Similarity=0.167  Sum_probs=66.0

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----CCcccCCHHH-HhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKE----GANMALSLST-LASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~~~~~~~~-~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      +++++..|.+.|.+|++++|+.++.+.+.+.    +.....+..+ ....+|+||-|+|.+..- ...   .--...+++
T Consensus        30 arai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~dliIN~Tp~G~~~-~~~---~~~~~~~~~  105 (170)
T d1nyta1          30 SRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISG-DIP---AIPSSLIHP  105 (170)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGT-CCC---CCCGGGCCT
T ss_pred             HHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccccccccceeecccccCccc-CCC---CCcHHHhcc
Confidence            5678888999999999999999998887664    2111112222 245799999999987531 110   111345778


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCc-EEe
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQIT-FLD  107 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~-~~~  107 (183)
                      +.+++|..-....+.  +.+..++.|.. +++
T Consensus       106 ~~~v~D~vY~P~~T~--ll~~A~~~G~~~~i~  135 (170)
T d1nyta1         106 GIYCYDMFYQKGKTP--FLAWCEQRGSKRNAD  135 (170)
T ss_dssp             TCEEEESCCCSSCCH--HHHHHHHTTCCEEEC
T ss_pred             CcEEEEeecCCCCCH--HHHHHHHcCCCcccC
Confidence            899999986665553  45555667754 555

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.001  Score=44.24  Aligned_cols=92  Identities=17%  Similarity=0.169  Sum_probs=63.5

Q ss_pred             HHHHhC-CCcEE-EEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE-e
Q psy755            7 RNLLKN-GHDVI-VYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI-D   82 (183)
Q Consensus         7 ~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii-d   82 (183)
                      ..+... +++++ ++|+++++.+.+.+. ++...++.+++.++.|+|++++|+..+.+.+.       ..+..|+.|+ +
T Consensus        19 ~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~I~tp~~~h~~~~~-------~al~~gk~V~~E   91 (164)
T d1tlta1          19 PVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVS-------TLLNAGVHVCVD   91 (164)
T ss_dssp             HHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHHHH-------HHHHTTCEEEEE
T ss_pred             HHHHhCCCcEEEEEEechhHhhhhhhhcccccccccchhhhhhcccccccccchhcccccc-------ccccccceeecc
Confidence            344443 55655 689999988877654 77788889999999999999999877665552       3456676654 3


Q ss_pred             c-cCCCchhHHHHHHHHHhcCCcE
Q psy755           83 S-STVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        83 ~-s~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      - -+....+...+.+...+.|..+
T Consensus        92 KPla~~~~e~~~l~~~a~~~~~~~  115 (164)
T d1tlta1          92 KPLAENLRDAERLVELAARKKLTL  115 (164)
T ss_dssp             SSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred             ccccCCHHHHHHHHHHHHHcCCcE
Confidence            2 1334566677777777666543

>d1mv8a3 c.26.3.1 (A:301-436) GDP-mannose 6-dehydrogenase, GDP-binding domain {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
domain: GDP-mannose 6-dehydrogenase, GDP-binding domain
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.28  E-value=0.00023  Score=46.16  Aligned_cols=78  Identities=13%  Similarity=0.287  Sum_probs=55.0

Q ss_pred             HHHHHHHhCCCcEEEEcCCchh-------HHHHH----HcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            4 HMARNLLKNGHDVIVYDKNTDA-------SQTLA----KEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~-------~~~~~----~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      .+...|.+.|++|.+||..-+.       .+...    ..+....+++.++++++|+|+++++.++ .+.+       ..
T Consensus        37 ~li~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i~~~D~ivi~t~h~~-f~~l-------~~  108 (136)
T d1mv8a3          37 ELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASSDVLVLGNGDEL-FVDL-------VN  108 (136)
T ss_dssp             HHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHCSEEEECSCCGG-GHHH-------HH
T ss_pred             HHHHHHhhhhccccccCCCCCHHHHhhhhhhhhhhccccccceeehhhhhhhhhceEEEEEeCCHH-HHHH-------HH
Confidence            5778899999999999953221       11111    1134567899999999999999999865 3333       33


Q ss_pred             cCCCCcEEEeccCCCch
Q psy755           73 HAKPGVIVIDSSTVDPQ   89 (183)
Q Consensus        73 ~l~~~~iiid~s~~~~~   89 (183)
                      .+.++++|+|+.+..+.
T Consensus       109 ~~~~~~~I~D~~~~~~~  125 (136)
T d1mv8a3         109 KTPSGKKLVDLVGFMPH  125 (136)
T ss_dssp             SCCTTCEEEESSSCCSS
T ss_pred             HhcCCCEEEECCCCCCh
Confidence            45678999999887553

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=97.26  E-value=0.00039  Score=48.17  Aligned_cols=100  Identities=12%  Similarity=0.175  Sum_probs=69.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh-ccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA-SGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      +|..+|+.|.+.|.+|+++|.+++++......+.... +++++. ..||+++-|--...-.+       +..+.+ +-++
T Consensus        38 VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~-~~~~~~~~~~DI~iPcA~~~~I~~-------~~a~~i-~ak~  108 (201)
T d1c1da1          38 VGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITT-------EVARTL-DCSV  108 (201)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCH-------HHHHHC-CCSE
T ss_pred             HHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccccc-CccccccccceeeecccccccccH-------HHHhhh-hhhe
Confidence            3788999999999999999999999998888776655 445544 48999887764433222       223334 3356


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEeecc
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLDAPV  110 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~~~~  110 (183)
                      |+...+ .|.+.+...+.+.++|+.|++..+
T Consensus       109 i~e~AN-~p~~~~~~~~~L~~rgI~~iPD~l  138 (201)
T d1c1da1         109 VAGAAN-NVIADEAASDILHARGILYAPDFV  138 (201)
T ss_dssp             ECCSCT-TCBCSHHHHHHHHHTTCEECCHHH
T ss_pred             eeccCC-CCcchhhHHHHhcccceEEEehhh
Confidence            665554 444444567788899998887443

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.20  E-value=0.00013  Score=54.27  Aligned_cols=68  Identities=15%  Similarity=0.257  Sum_probs=52.9

Q ss_pred             cEEEEcCCchhHHHHHHc----CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchh
Q psy755           15 DVIVYDKNTDASQTLAKE----GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQV   90 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~   90 (183)
                      +|.+|+|++++.+.+.+.    +.....+..+.+.+||+|+.|+|...+   ++   +  .+++++|.+|...++..|..
T Consensus       152 ~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~s~~P---~~---~--~~~l~~G~hv~~iGs~~p~~  223 (320)
T d1omoa_         152 EVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPSRKP---VV---K--AEWVEEGTHINAIGADGPGK  223 (320)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCCCSSC---CB---C--GGGCCTTCEEEECSCCSTTC
T ss_pred             hcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEeccCccc---cc---c--hhhcCCCCeEeecCCccccc
Confidence            899999999998776543    556666778889999999999987654   23   1  34788999999988876654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.18  E-value=0.0004  Score=46.65  Aligned_cols=100  Identities=14%  Similarity=0.206  Sum_probs=66.0

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHH--HHHhcCCccc-cccCC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDV--LDAYDGSDGI-LKHAK   75 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~--~~v~~~~~~l-~~~l~   75 (183)
                      +|++++..|.+.|. +|++++|++++.+.+.+. +....+...  ..++|+||-|+|.+..-  ...-   ..+ ...++
T Consensus        28 aarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~--~~~~DliINaTpiGm~~~~~~~~---l~~~~~~~~  102 (167)
T d1npya1          28 MAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD---LAFPKAFID  102 (167)
T ss_dssp             THHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS---CSSCHHHHH
T ss_pred             HHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc--ccchhhheeccccCCcccccccc---ccccHhhcC
Confidence            46889999999997 799999999998887654 433332222  25799999999854210  0000   001 12355


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++.+++|..-....+.  +.+..+++|...++
T Consensus       103 ~~~~v~D~vY~P~~T~--ll~~A~~~G~~~i~  132 (167)
T d1npya1         103 NASVAFDVVAMPVETP--FIRYAQARGKQTIS  132 (167)
T ss_dssp             HCSEEEECCCSSSSCH--HHHHHHHTTCEEEC
T ss_pred             CcceEEEEeeccCCCH--HHHHHHHCCCeEEE
Confidence            7889999976555543  45566778888777

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.00059  Score=46.38  Aligned_cols=100  Identities=8%  Similarity=0.138  Sum_probs=64.7

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc--------CC----ccc---CCHHHHhccCCEEEEecCChHHHHHHhc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKE--------GA----NMA---LSLSTLASGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~--------g~----~~~---~~~~~~~~~adiVi~~vp~~~~~~~v~~   65 (183)
                      |++++..|.+.|. ++++++|++++.+++...        ..    ...   ....+....+|+||-|+|.+..  ..- 
T Consensus        30 arai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiIN~Tp~G~~--~~~-  106 (182)
T d1vi2a1          30 STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMK--PLE-  106 (182)
T ss_dssp             HHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEECSSTTST--TSC-
T ss_pred             HHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceeccccCCccc--ccc-
Confidence            6788888998887 799999999877664331        11    111   1234556789999999987532  110 


Q ss_pred             CCccc---cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           66 GSDGI---LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        66 ~~~~l---~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                       .+.+   ...++++.+++|..-....+  .+.+..++.|..+++
T Consensus       107 -~~~~~~~~~~~~~~~~v~Di~Y~p~~T--~ll~~a~~~g~~~i~  148 (182)
T d1vi2a1         107 -NESLVNDISLLHPGLLVTECVYNPHMT--KLLQQAQQAGCKTID  148 (182)
T ss_dssp             -SCCSCCCGGGSCTTCEEEECCCSSSSC--HHHHHHHTTTCEEEC
T ss_pred             -chhhhhHHHhhhcchhhHHhhcCcccc--HHHHHHHHCcCeEec
Confidence             0111   23578889999997544433  334555677888877

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.07  E-value=0.00014  Score=49.28  Aligned_cols=98  Identities=14%  Similarity=0.104  Sum_probs=60.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----C-CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKE----G-ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g-~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      +++++..|.+.+-+|++++|+.++++.+.+.    + +............+|+||-|+|.+..-...    ......+++
T Consensus        30 arai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~diiIN~tp~g~~~~~~----~~~~~~~~~  105 (171)
T d1p77a1          30 TKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSGGTA----SVDAEILKL  105 (171)
T ss_dssp             HHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-----------CCCHHHHHH
T ss_pred             HHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccccccccceeeeccccccccccc----chhhhhhcc
Confidence            5677778888778999999999998877653    1 111211222356899999999986532221    222334567


Q ss_pred             CcEEEeccCCCchhHHHHHHHHHhcCCc
Q psy755           77 GVIVIDSSTVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        77 ~~iiid~s~~~~~~~~~~~~~~~~~g~~  104 (183)
                      +.+++|..-..|..+ .+....++.|..
T Consensus       106 ~~~~~D~vy~~p~~T-~~l~~A~~~g~~  132 (171)
T d1p77a1         106 GSAFYDMQYAKGTDT-PFIALCKSLGLT  132 (171)
T ss_dssp             CSCEEESCCCTTSCC-HHHHHHHHTTCC
T ss_pred             cceeeeeeccCcccH-HHHHHHHHcCCC
Confidence            888999886555433 234455666764

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.05  E-value=0.0039  Score=42.05  Aligned_cols=99  Identities=13%  Similarity=0.226  Sum_probs=66.3

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHc-C----CcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKE-G----ANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~-g----~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||...+..+... +++|+ ++|+++++.+.+.+. +    ....++.+++++  +.|+|++++|.....+.+       .
T Consensus        12 ~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~tp~~~h~~~~-------~   84 (184)
T d1ydwa1          12 IARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVEWA-------I   84 (184)
T ss_dssp             THHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGHHHHH-------H
T ss_pred             HHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecccchhhcchh-------h
Confidence            567777777765 55777 579999988777654 3    245678888874  589999999997776555       3


Q ss_pred             ccCCCCcEEE-ecc-CCCchhHHHHHHHHHhcCCcEE
Q psy755           72 KHAKPGVIVI-DSS-TVDPQVPQTLSNLAREKQITFL  106 (183)
Q Consensus        72 ~~l~~~~iii-d~s-~~~~~~~~~~~~~~~~~g~~~~  106 (183)
                      ..+..|+.|+ +-- .........+.+..++.+..+.
T Consensus        85 ~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~~~~  121 (184)
T d1ydwa1          85 KAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIM  121 (184)
T ss_dssp             HHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEE
T ss_pred             hhhhccceeecccccccCHHHHHHHHHHHHhhCCEEE
Confidence            4566777654 221 2345556667777666665543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.00  E-value=0.00072  Score=40.45  Aligned_cols=52  Identities=17%  Similarity=0.167  Sum_probs=38.7

Q ss_pred             HHHHHHHhCCCcEEEEcCCch-hHHHHHHcCCcccC-CHHHHhccCCEEEEecC
Q psy755            4 HMARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMAL-SLSTLASGAEFIISMLP   55 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~-~~~~~~~~adiVi~~vp   55 (183)
                      ++|+.|.+.|++|.++|+.+. ..+++.+.|+.... -..+-+.++|+||..-.
T Consensus        16 ~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i~~~d~vV~SsA   69 (89)
T d1j6ua1          16 AVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPA   69 (89)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSCCCCSEEEECTT
T ss_pred             HHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeeecccccCCCCEEEEecC
Confidence            689999999999999998764 56778888876532 23344577888877653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.91  E-value=0.0039  Score=40.60  Aligned_cols=55  Identities=11%  Similarity=0.089  Sum_probs=40.1

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHcC---------CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKEG---------ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~g---------~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|.++|..|+..|.  +++++|.++.+.+..--..         .....+..+.+++||+|+++..
T Consensus        12 VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1          12 IGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             THHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCS
T ss_pred             HHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCC
Confidence            58899999998887  7999999876644432221         1224466788899999999864

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=96.86  E-value=0.00026  Score=53.01  Aligned_cols=69  Identities=17%  Similarity=0.261  Sum_probs=51.1

Q ss_pred             cEEEEcCCchhHHHHHHc-----CC--cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           15 DVIVYDKNTDASQTLAKE-----GA--NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~~-----g~--~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      +|++|+|++++.+++.+.     |.  ..++++++++++||+|+.|++.+.. ..++   +  ..++++|.+|...++..
T Consensus       155 ~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s~-~Pv~---~--~~~l~pG~hI~aiGs~~  228 (340)
T d1x7da_         155 EIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAY-ATII---T--PDMLEPGMHLNAVGGDC  228 (340)
T ss_dssp             EEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSE-EEEE---C--GGGCCTTCEEEECSCCB
T ss_pred             eeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCCC-Cccc---c--hhhcCCCCEEeecccch
Confidence            799999999988777643     43  4588999999999999999965321 1222   1  34688999998887766


Q ss_pred             ch
Q psy755           88 PQ   89 (183)
Q Consensus        88 ~~   89 (183)
                      |.
T Consensus       229 p~  230 (340)
T d1x7da_         229 PG  230 (340)
T ss_dssp             TT
T ss_pred             hh
Confidence            54

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0011  Score=47.10  Aligned_cols=76  Identities=13%  Similarity=0.196  Sum_probs=51.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++++|++++++.+.++       ..+.-.++-.+.+=+.+.+.++..+   +.+.+.+..-.++
T Consensus        19 IG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~-------~~~~~~~~~~~~~Dvs~~~~v~~~~---~~i~~~~g~idil   88 (244)
T d1yb1a_          19 IGRLTAYEFAKLKSKLVLWDINKHGLEETAAK-------CKGLGAKVHTFVVDCSNREDIYSSA---KKVKAEIGDVSIL   88 (244)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHTTCCEEEEECCTTCHHHHHHHH---HHHHHHTCCCSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhcCCcEEEEEeeCCCHHHHHHHH---HHHHHHcCCCcee
Confidence            68999999999999999999999988876543       1111112233333445556666665   6666666666777


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      ++....
T Consensus        89 innag~   94 (244)
T d1yb1a_          89 VNNAGV   94 (244)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            776654

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.76  E-value=0.0022  Score=40.26  Aligned_cols=92  Identities=14%  Similarity=0.252  Sum_probs=62.5

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |..+.+.|.+.||+|+..+.+.+.+.     |.....++.|+=...|++++++|. ..+..++   ++.... .-..+++
T Consensus        17 g~~v~~~L~~~g~~V~pVnP~~~~i~-----G~~~y~sl~~lp~~~D~vvi~vp~-~~~~~~l---~~~~~~-g~k~v~~   86 (116)
T d1y81a1          17 GNIILKDLLSKGFEVLPVNPNYDEIE-----GLKCYRSVRELPKDVDVIVFVVPP-KVGLQVA---KEAVEA-GFKKLWF   86 (116)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTCSEET-----TEECBSSGGGSCTTCCEEEECSCH-HHHHHHH---HHHHHT-TCCEEEE
T ss_pred             HHHHHHHHHHCCCEEEEEcccccccc-----CccccccchhccccceEEEEEeCH-HHHHHHH---HHHHhc-CCceEEe
Confidence            56778889999999888876654432     666777888877788999999987 4455555   555432 2334444


Q ss_pred             eccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           82 DSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        82 d~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..++.    ...+.+.+++.|+.++.
T Consensus        87 ~~g~~----~~~~~~~a~~~gi~vig  108 (116)
T d1y81a1          87 QPGAE----SEEIRRFLEKAGVEYSF  108 (116)
T ss_dssp             CTTSC----CHHHHHHHHHHTCEEEC
T ss_pred             ccchh----hHHHHHHHHHcCCEEEc
Confidence            43322    23456777788888776

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.75  E-value=0.0015  Score=42.82  Aligned_cols=57  Identities=14%  Similarity=0.161  Sum_probs=40.1

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHH-------c---CCcccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAK-------E---GANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~-------~---g~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|.++|..|+..|.  +++++|+++++++....       .   .........+.+++||+|+++...+
T Consensus        17 vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvitag~~   85 (148)
T d1ldna1          17 VGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGAN   85 (148)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSCC
T ss_pred             HHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEecccc
Confidence            47889999988876  89999999987543221       1   2333334456788999999987543

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.65  E-value=0.0017  Score=39.33  Aligned_cols=53  Identities=25%  Similarity=0.266  Sum_probs=38.5

Q ss_pred             HHHHHHHHhCCCcEEEEcCCch-hHHHHHHcCCccc-CCHHHHhccCCEEEEecC
Q psy755            3 SHMARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMA-LSLSTLASGAEFIISMLP   55 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~-~~~~~~~~~adiVi~~vp   55 (183)
                      .++|+.|.+.|++|.++|+... ..+.+.+.|+... ....+-+.+.|+|+..-.
T Consensus        22 s~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i~~~d~vV~S~A   76 (96)
T d1p3da1          22 SGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSA   76 (96)
T ss_dssp             HHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEECTT
T ss_pred             HHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCccccCCCCCEEEECCC
Confidence            5689999999999999997643 5567777787543 233444678888877653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.0024  Score=42.82  Aligned_cols=41  Identities=20%  Similarity=0.226  Sum_probs=31.5

Q ss_pred             CCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCC
Q psy755           38 LSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVD   87 (183)
Q Consensus        38 ~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~   87 (183)
                      .++.+.++++|+|+.++..+..    +   +  .+++++|.+|+|.+...
T Consensus        74 ~~l~~~~~~aDivi~a~G~~~~----i---~--~~~vk~g~iviDvgi~~  114 (170)
T d1a4ia1          74 AHLDEEVNKGDILVVATGQPEM----V---K--GEWIKPGAIVIDCGINY  114 (170)
T ss_dssp             SSHHHHHTTCSEEEECCCCTTC----B---C--GGGSCTTCEEEECCCBC
T ss_pred             ccHHHHHhhccchhhccccccc----c---c--cccccCCCeEeccCccc
Confidence            4566778899999999987542    2   1  35788999999998654

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=96.59  E-value=0.0076  Score=39.87  Aligned_cols=93  Identities=14%  Similarity=0.150  Sum_probs=60.5

Q ss_pred             HHHHHhC-CCcEEEEcCCchhHHHHHHc-CC-cccCCHHHHhc-cCCEEEEecCChHHHHHHhcCCccccccCCCCcEE-
Q psy755            6 ARNLLKN-GHDVIVYDKNTDASQTLAKE-GA-NMALSLSTLAS-GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV-   80 (183)
Q Consensus         6 A~~l~~~-g~~V~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~-~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii-   80 (183)
                      ...+.+. +.+++++|+++++.+.+.+. +. ...++.+++++ +.|+|++++|+..+.+-+.       ..+..|+.| 
T Consensus        18 ~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iD~V~I~tp~~~H~~~~~-------~al~~gk~V~   90 (167)
T d1xeaa1          18 LPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHSTLAA-------FFLHLGIPTF   90 (167)
T ss_dssp             HHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHHHHH-------HHHHTTCCEE
T ss_pred             HHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHHHhcccccceecccccccccccccc-------cccccccccc
Confidence            3445444 44888899999998888765 44 34567777664 6799999999977765553       345566654 


Q ss_pred             Eecc-CCCchhHHHHHHHHHhcCCcE
Q psy755           81 IDSS-TVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        81 id~s-~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      ++-= +........+.+...+.+..+
T Consensus        91 ~EKP~~~~~~e~~~l~~~a~~~~~~~  116 (167)
T d1xeaa1          91 VDKPLAASAQECENLYELAEKHHQPL  116 (167)
T ss_dssp             EESCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred             cCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence            3322 234455667777776666553

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.55  E-value=0.0022  Score=45.86  Aligned_cols=74  Identities=20%  Similarity=0.279  Sum_probs=48.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++++...+.       +.+.  ..++..+.  +.++.+++.++   +.+.+.+.+=.
T Consensus        14 IG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~-------l~~~--g~~~~~~~~Dvs~~~~v~~~~---~~~~~~~g~iD   81 (257)
T d2rhca1          14 IGLEIARRLGKEGLRVFVCARGEEGLRTTLKE-------LREA--GVEADGRTCDVRSVPEIEALV---AAVVERYGPVD   81 (257)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHT--TCCEEEEECCTTCHHHHHHHH---HHHHHHTCSCS
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhc--CCcEEEEEeecCCHHHHHHHH---HHHHHHhCCCC
Confidence            69999999999999999999999888776542       1111  12233222  34566677766   66666555556


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|+....
T Consensus        82 ilVnnAG~   89 (257)
T d2rhca1          82 VLVNNAGR   89 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            77766543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.54  E-value=0.00099  Score=45.54  Aligned_cols=31  Identities=26%  Similarity=0.393  Sum_probs=27.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      +|+.+|+.|++.|.+|++.+|++++.+.+.+
T Consensus        35 IG~~ia~~la~~G~~V~~~~r~~~~~~~~~~   65 (191)
T d1luaa1          35 VGMRSAALLAGEGAEVVLCGRKLDKAQAAAD   65 (191)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccchhhcccchHHHHHHHH
Confidence            5899999999999999999999998876654

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.52  E-value=0.0019  Score=43.05  Aligned_cols=62  Identities=24%  Similarity=0.246  Sum_probs=40.9

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |+.++..|.+.|..|+..+..              +.++.+.++++|+||.++..+..    +   +  .+++++|.++|
T Consensus        50 G~Pla~lL~~~gatVt~~h~~--------------t~~l~~~~~~ADivI~a~G~p~~----i---~--~~~vk~g~vvI  106 (166)
T d1b0aa1          50 GRPMSMELLLAGCTTTVTHRF--------------TKNLRHHVENADLLIVAVGKPGF----I---P--GDWIKEGAIVI  106 (166)
T ss_dssp             HHHHHHHHHTTTCEEEEECSS--------------CSCHHHHHHHCSEEEECSCCTTC----B---C--TTTSCTTCEEE
T ss_pred             cHHHHHHHHHhhccccccccc--------------cchhHHHHhhhhHhhhhccCccc----c---c--ccccCCCcEEE
Confidence            445555555555555444322              23667778999999999987543    2   1  34678999999


Q ss_pred             eccCC
Q psy755           82 DSSTV   86 (183)
Q Consensus        82 d~s~~   86 (183)
                      |.+..
T Consensus       107 DvGi~  111 (166)
T d1b0aa1         107 DVGIN  111 (166)
T ss_dssp             ECCCE
T ss_pred             ecCce
Confidence            99854

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.46  E-value=0.0026  Score=45.35  Aligned_cols=74  Identities=20%  Similarity=0.323  Sum_probs=47.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.+.       +.+.  ..+++.+  =+.+..+++.++   +.+.+.+.+=+
T Consensus        13 IG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~-------i~~~--g~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iD   80 (255)
T d1gega_          13 IGKAIALRLVKDGFAVAIADYNDATAKAVASE-------INQA--GGHAVAVKVDVSDRDQVFAAV---EQARKTLGGFD   80 (255)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHT--TCCEEEEECCTTSHHHHHHHH---HHHHHHTTCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhc--CCcEEEEEeeCCCHHHHHHHH---HHHHHHhCCcc
Confidence            58999999999999999999999987765432       1111  1223322  234555566665   55555555556


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|+....
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            67766543

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.40  E-value=0.0028  Score=45.37  Aligned_cols=74  Identities=14%  Similarity=0.214  Sum_probs=47.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCC-CC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAK-PG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~-~~   77 (183)
                      ||+++|+.|++.|++|++.+|++++++++.+.       +.+  ...++.++  =+.+..+++.++   +.+...+. +=
T Consensus        20 IG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~-------~~~--~g~~~~~~~~Dv~~~~~v~~~~---~~~~~~~~~~i   87 (259)
T d2ae2a_          20 IGYGIVEELASLGASVYTCSRNQKELNDCLTQ-------WRS--KGFKVEASVCDLSSRSERQELM---NTVANHFHGKL   87 (259)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHH--TTCEEEEEECCTTCHHHHHHHH---HHHHHHTTTCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHh--cCCCceEEEeeCCCHHHHHHHH---HHHHHHhCCCc
Confidence            68999999999999999999999988776542       111  11222222  234556666665   55555554 34


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++|+....
T Consensus        88 dilvnnAG~   96 (259)
T d2ae2a_          88 NILVNNAGI   96 (259)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEECCce
Confidence            667766543

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.40  E-value=0.0031  Score=45.09  Aligned_cols=76  Identities=12%  Similarity=0.067  Sum_probs=47.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC-CCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA-KPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l-~~~~i   79 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.+.       +.+.-..+..+.+=+.+..+++.++   +.+.+.+ .+-.+
T Consensus        18 IG~aia~~la~~G~~V~i~~r~~~~l~~~~~~-------~~~~~~~~~~~~~D~s~~~~~~~~~---~~~~~~~~g~idi   87 (258)
T d1ae1a_          18 IGYAIVEELAGLGARVYTCSRNEKELDECLEI-------WREKGLNVEGSVCDLLSRTERDKLM---QTVAHVFDGKLNI   87 (258)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHTTCCEEEEECCTTCHHHHHHHH---HHHHHHTTSCCCE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhcCCCceEEEeecCCHHHHHHHH---HHHHHHhCCCcEE
Confidence            68999999999999999999999887765542       1111111222223334556666665   5555555 34566


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      ++++...
T Consensus        88 linnag~   94 (258)
T d1ae1a_          88 LVNNAGV   94 (258)
T ss_dssp             EEECCCC
T ss_pred             Eeccccc
Confidence            7765544

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.40  E-value=0.0028  Score=45.11  Aligned_cols=71  Identities=21%  Similarity=0.382  Sum_probs=48.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.||++++++.+.++..           ++..+..=+.+.++++.++   +++.+.+.+=+++
T Consensus        18 IG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-----------~~~~~~~Dvs~~~~v~~~~---~~~~~~~g~iDil   83 (250)
T d1ydea1          18 IGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----------GAVFILCDVTQEDDVKTLV---SETIRRFGRLDCV   83 (250)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----------TEEEEECCTTSHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-----------CCeEEEccCCCHHHHHHHH---HHHHHhcCCCCEE
Confidence            6899999999999999999999998887765531           1112222244556666665   5555555444666


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |+...
T Consensus        84 VnnAG   88 (250)
T d1ydea1          84 VNNAG   88 (250)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            76654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.39  E-value=0.0016  Score=42.62  Aligned_cols=56  Identities=18%  Similarity=0.157  Sum_probs=38.5

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHH-------c--CC-cccCCHHHHhccCCEEEEecCCh
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAK-------E--GA-NMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~-------~--g~-~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +|.++|..|+..|.  +|++||+++++.+....       .  .. ....+.+ .+++||+|+++...+
T Consensus        16 VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~-~~~~adivvitag~~   83 (146)
T d1ez4a1          16 VGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS-DCKDADLVVITAGAP   83 (146)
T ss_dssp             HHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG-GGTTCSEEEECCCC-
T ss_pred             HHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH-HhccccEEEEecccc
Confidence            47889999998874  89999999987543221       1  12 2233444 468999999997554

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00049  Score=47.45  Aligned_cols=56  Identities=16%  Similarity=0.220  Sum_probs=41.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCC-------cccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGA-------NMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|.+.||+|++++|++++.+.....++       ...+++.++++++|+||.++..
T Consensus        15 iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~   77 (205)
T d1hdoa_          15 TGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT   77 (205)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             HHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEecc
Confidence            4889999999999999999999988654433332       1123445678899999998853

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0046  Score=44.14  Aligned_cols=76  Identities=21%  Similarity=0.322  Sum_probs=48.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|++++++++.+.       +.+.-...+++.+.  +.++.+++.++   +.+...+..=.
T Consensus        22 IG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~-------l~~~~~~~~~~~~~~Dls~~~~v~~~v---~~~~~~~g~iD   91 (257)
T d1xg5a_          22 IGAAVARALVQQGLKVVGCARTVGNIEELAAE-------CKSAGYPGTLIPYRCDLSNEEDILSMF---SAIRSQHSGVD   91 (257)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHTTCSSEEEEEECCTTCHHHHHHHH---HHHHHHHCCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhcCCCceEEEEEccCCCHHHHHHHH---HHHHHhcCCCC
Confidence            58999999999999999999999988776542       11110112333332  34556666666   55555554445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|++...
T Consensus        92 ~lVnnAg~   99 (257)
T d1xg5a_          92 ICINNAGL   99 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            66766544

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.37  E-value=0.0055  Score=43.73  Aligned_cols=75  Identities=12%  Similarity=0.116  Sum_probs=49.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++++...+.       +.+...+.+++.+.  +.++.+++.++   +.+...+.+=+
T Consensus        16 IG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~-------~~~~~~~~~~~~~~~Dvt~~~~v~~~~---~~~~~~~G~iD   85 (258)
T d1iy8a_          16 LGRATAVRLAAEGAKLSLVDVSSEGLEASKAA-------VLETAPDAEVLTTVADVSDEAQVEAYV---TATTERFGRID   85 (258)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHHCTTCCEEEEECCTTSHHHHHHHH---HHHHHHHSCCS
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhhCCCCeEEEEeccCCCHHHHHHHH---HHHHHHhCCCC
Confidence            68999999999999999999999987765432       11111233444443  34556666665   55555555556


Q ss_pred             EEEeccC
Q psy755           79 IVIDSST   85 (183)
Q Consensus        79 iiid~s~   85 (183)
                      ++|+...
T Consensus        86 iLVnnAG   92 (258)
T d1iy8a_          86 GFFNNAG   92 (258)
T ss_dssp             EEEECCC
T ss_pred             EEEECCc
Confidence            7777654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=96.34  E-value=0.0065  Score=39.23  Aligned_cols=92  Identities=15%  Similarity=0.198  Sum_probs=62.8

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |..+...|.+.||+|+..+...+.+.     |.....++.|+-...|+|++++|. ..+..++   +++... ....+++
T Consensus        35 g~~v~~~L~~~g~~v~pVnP~~~~i~-----G~~~~~sl~dlp~~iD~v~i~vp~-~~~~~~~---~e~~~~-g~k~v~~  104 (139)
T d2d59a1          35 ANIVMKYLLEHGYDVYPVNPKYEEVL-----GRKCYPSVLDIPDKIEVVDLFVKP-KLTMEYV---EQAIKK-GAKVVWF  104 (139)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTCSEET-----TEECBSSGGGCSSCCSEEEECSCH-HHHHHHH---HHHHHH-TCSEEEE
T ss_pred             hHHHHHHHHHCCCEEEEECCcccccC-----CCcccccccccCccceEEEEEeCH-HHHHHHH---HHHHHh-CCCEEEE
Confidence            56778889999999888876543322     666778888877789999999986 5566666   555543 2334444


Q ss_pred             eccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           82 DSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        82 d~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ..+...    ....+.+.+.|+.++.
T Consensus       105 ~~G~~~----ee~~~~a~~~gi~vig  126 (139)
T d2d59a1         105 QYNTYN----REASKKADEAGLIIVA  126 (139)
T ss_dssp             CTTCCC----HHHHHHHHHTTCEEEE
T ss_pred             eccccC----HHHHHHHHHCCCEEEc
Confidence            333322    3456677778888876

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.34  E-value=0.016  Score=38.40  Aligned_cols=78  Identities=17%  Similarity=0.154  Sum_probs=53.7

Q ss_pred             CcHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcc-----cCCHHHHh--------ccCCEEEEecCChHHHHHHhcC
Q psy755            1 MGSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANM-----ALSLSTLA--------SGAEFIISMLPASQDVLDAYDG   66 (183)
Q Consensus         1 mG~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~--------~~adiVi~~vp~~~~~~~v~~~   66 (183)
                      ||...++.+...|. +|++.|+++++.+.+.+.|...     .++..+..        ...|+||.++..+..++..   
T Consensus        38 iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a---  114 (171)
T d1pl8a2          38 IGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAG---  114 (171)
T ss_dssp             HHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHH---
T ss_pred             cHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEeccCCchhHHHH---
Confidence            36666777777888 7999999999999998887532     22333322        2589999999886655544   


Q ss_pred             CccccccCCCCcEEEeccC
Q psy755           67 SDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        67 ~~~l~~~l~~~~iiid~s~   85 (183)
                          .+.++++..++-.+.
T Consensus       115 ----~~~~~~gG~iv~~G~  129 (171)
T d1pl8a2         115 ----IYATRSGGTLVLVGL  129 (171)
T ss_dssp             ----HHHSCTTCEEEECSC
T ss_pred             ----HHHhcCCCEEEEEec
Confidence                355667666655554

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.31  E-value=0.0046  Score=43.75  Aligned_cols=71  Identities=15%  Similarity=0.178  Sum_probs=48.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.+|++++++...+.-            ++..+.+=+.++.+++.++   +.+.+.+.+=+++
T Consensus        17 IG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~------------~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iDil   81 (242)
T d1ulsa_          17 IGRATLELFAKEGARLVACDIEEGPLREAAEAV------------GAHPVVMDVADPASVERGF---AEALAHLGRLDGV   81 (242)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------------TCEEEECCTTCHHHHHHHH---HHHHHHHSSCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------------CCeEEEEecCCHHHHHHHH---HHHHHhcCCceEE
Confidence            589999999999999999999999888776531            1112222344566666665   5555555444567


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |+....
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            765543

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=96.30  E-value=0.002  Score=43.10  Aligned_cols=93  Identities=10%  Similarity=0.188  Sum_probs=58.5

Q ss_pred             CcHHHHHHHHhC-CCcEE-EEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKN-GHDVI-VYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+..+..|.+. +++++ ++|++++....   .+....++..+..++.|+|++++|.....+.+       .+.+..|+
T Consensus        14 ig~~~~~~l~~~~~~elvav~~~~~~~~~~---~~~~~~~~~~~~~~~~D~Vvi~tp~~~h~~~a-------~~aL~aG~   83 (170)
T d1f06a1          14 LGRSVEKLIAKQPDMDLVGIFSRRATLDTK---TPVFDVADVDKHADDVDVLFLCMGSATDIPEQ-------APKFAQFA   83 (170)
T ss_dssp             HHHHHHHHHTTCSSEEEEEEEESSSCCSSS---SCEEEGGGGGGTTTTCSEEEECSCTTTHHHHH-------HHHHTTTS
T ss_pred             HHHHHHHHHHhCCCcEEEEEEecccccccc---cccccchhhhhhccccceEEEeCCCcccHHHH-------HHHHHCCC
Confidence            577778888765 45655 56888765332   23344556667778999999999987654443       46788999


Q ss_pred             EEEeccCCC---chhHHHHHHHHHhcCC
Q psy755           79 IVIDSSTVD---PQVPQTLSNLAREKQI  103 (183)
Q Consensus        79 iiid~s~~~---~~~~~~~~~~~~~~g~  103 (183)
                      .++++....   +...+.+.+..++.|.
T Consensus        84 ~vv~~~~~~~~~~~~~~~l~~~A~~~~~  111 (170)
T d1f06a1          84 CTVDTYDNHRDIPRHRQVMNEAATAAGN  111 (170)
T ss_dssp             EEECCCCCGGGHHHHHHHHHHHHHHHTC
T ss_pred             cEEEecCccccCHHHHHHHHHHHHhcCc
Confidence            888654332   2233344444444443

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.25  E-value=0.0079  Score=39.50  Aligned_cols=54  Identities=20%  Similarity=0.236  Sum_probs=39.3

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc--------C----CcccCCHHHHhccCCEEEEecC
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKE--------G----ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~--------g----~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      |.++|..|+..++ +++++|+++++++.....        +    ....++.++.+++||+|+++..
T Consensus        19 G~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvitag   85 (154)
T d1pzga1          19 GGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG   85 (154)
T ss_dssp             HHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred             HHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEecc
Confidence            7788888888786 899999999875443221        1    1224456778899999999884

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.24  E-value=0.0031  Score=44.87  Aligned_cols=75  Identities=15%  Similarity=0.275  Sum_probs=46.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.+.       +.+.-.++..+..=+.++++++.++   +.+.+.+.+=+++
T Consensus        22 IG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~-------l~~~g~~~~~~~~Dvt~~~~v~~~~---~~~~~~~g~iDil   91 (251)
T d2c07a1          22 IGREIAKMLAKSVSHVICISRTQKSCDSVVDE-------IKSFGYESSGYAGDVSKKEEISEVI---NKILTEHKNVDIL   91 (251)
T ss_dssp             HHHHHHHHHTTTSSEEEEEESSHHHHHHHHHH-------HHTTTCCEEEEECCTTCHHHHHHHH---HHHHHHCSCCCEE
T ss_pred             HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH-------HHhcCCcEEEEEccCCCHHHHHHHH---HHHHHhcCCceee
Confidence            68999999999999999999999988776542       1110001122222234556666665   5555555454566


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |+...
T Consensus        92 vnnag   96 (251)
T d2c07a1          92 VNNAG   96 (251)
T ss_dssp             EECCC
T ss_pred             eeccc
Confidence            66544

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=96.19  E-value=0.023  Score=37.95  Aligned_cols=92  Identities=18%  Similarity=0.210  Sum_probs=60.3

Q ss_pred             HHHHHhCC--CcEE-EEcCCchhHHHHHHc-CC-cccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            6 ARNLLKNG--HDVI-VYDKNTDASQTLAKE-GA-NMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         6 A~~l~~~g--~~V~-~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ...+.+.+  ++|+ ++|+++++.+.+.+. +. ...++.+++++  +.|+|++++|...+.+.+       ...+..|+
T Consensus        20 ~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~~~~id~v~I~tp~~~h~~~~-------~~al~~gk   92 (181)
T d1zh8a1          20 LPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELNLPFI-------EKALRKGV   92 (181)
T ss_dssp             HHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGHHHHH-------HHHHHTTC
T ss_pred             HHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeeccccccccceeecccccccccccc-------ccccccch
Confidence            44455533  3666 689999998887654 54 35688999876  579999999987665554       23455676


Q ss_pred             EEE-ecc-CCCchhHHHHHHHHHhcCCc
Q psy755           79 IVI-DSS-TVDPQVPQTLSNLAREKQIT  104 (183)
Q Consensus        79 iii-d~s-~~~~~~~~~~~~~~~~~g~~  104 (183)
                      .|+ +-- +........+.+..++.+..
T Consensus        93 ~V~~EKPl~~~~~e~~~l~~~~~~~~~~  120 (181)
T d1zh8a1          93 HVICEKPISTDVETGKKVVELSEKSEKT  120 (181)
T ss_dssp             EEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred             hhhcCCCCcCCHHHHHHHHHHHHHhCCe
Confidence            654 322 23455666677776666644

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.16  E-value=0.0038  Score=44.51  Aligned_cols=74  Identities=20%  Similarity=0.310  Sum_probs=46.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++++++.++       +.+.  ..+++.+.  +.++.+++.++   +.+.+.+.+=+
T Consensus        23 IG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~-------l~~~--g~~~~~~~~Dvs~~~~~~~~~---~~~~~~~g~iD   90 (255)
T d1fmca_          23 IGKEIAITFATAGASVVVSDINADAANHVVDE-------IQQL--GGQAFACRCDITSEQELSALA---DFAISKLGKVD   90 (255)
T ss_dssp             HHHHHHHHHHTTTCEEEEEESCHHHHHHHHHH-------HHHT--TCCEEEEECCTTCHHHHHHHH---HHHHHHHSSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHHc--CCcEEEEEccCCCHHHHHHHH---HHHHHHcCCCC
Confidence            58999999999999999999999887765532       1111  12333333  23455566655   55555554445


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|+....
T Consensus        91 ilvnnAG~   98 (255)
T d1fmca_          91 ILVNNAGG   98 (255)
T ss_dssp             EEEECCCC
T ss_pred             EeeeCCcC
Confidence            66665543

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.15  E-value=0.0036  Score=44.74  Aligned_cols=73  Identities=15%  Similarity=0.255  Sum_probs=47.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.||++++++.+.+.       +.+  ...++..+.  +.+..+++.++   +.+...+..=.
T Consensus        17 IG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~-------~~~--~g~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iD   84 (260)
T d1zema1          17 IGLATALRLAEEGTAIALLDMNREALEKAEAS-------VRE--KGVEARSYVCDVTSEEAVIGTV---DSVVRDFGKID   84 (260)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHT--TTSCEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHh--cCCcEEEEEccCCCHHHHHHHH---HHHHHHhCCCC
Confidence            68999999999999999999999888766542       111  122333333  34556666666   55555554555


Q ss_pred             EEEeccC
Q psy755           79 IVIDSST   85 (183)
Q Consensus        79 iiid~s~   85 (183)
                      ++|+...
T Consensus        85 ilVnnaG   91 (260)
T d1zema1          85 FLFNNAG   91 (260)
T ss_dssp             EEEECCC
T ss_pred             eehhhhc
Confidence            6666544

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.0066  Score=42.90  Aligned_cols=72  Identities=13%  Similarity=0.178  Sum_probs=47.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.+.-          -.++..+.+=+.+..+++.++   +.+...+.+=+++
T Consensus        16 IG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iDil   82 (243)
T d1q7ba_          16 IGRAIAETLAARGAKVIGTATSENGAQAISDYL----------GANGKGLMLNVTDPASIESVL---EKIRAEFGEVDIL   82 (243)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----------GGGEEEEECCTTCHHHHHHHH---HHHHHHTCSCSEE
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----------CCCCcEEEEEecCHHHhhhhh---hhhhcccCCccee
Confidence            689999999999999999999999887765430          011222222244566666666   5565555555566


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |+...
T Consensus        83 VnnAg   87 (243)
T d1q7ba_          83 VNNAG   87 (243)
T ss_dssp             EECCC
T ss_pred             hhhhh
Confidence            66554

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.14  E-value=0.023  Score=37.37  Aligned_cols=78  Identities=10%  Similarity=0.043  Sum_probs=52.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-------cCCHHHH---h-----ccCCEEEEecCChHHHHHHhc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-------ALSLSTL---A-----SGAEFIISMLPASQDVLDAYD   65 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-------~~~~~~~---~-----~~adiVi~~vp~~~~~~~v~~   65 (183)
                      ||...++.+...|.+|++.|+++++.+.+.+.|...       .++..+.   +     ..+|+||.++..+..++..+ 
T Consensus        38 vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~-  116 (170)
T d1e3ja2          38 IGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGI-  116 (170)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHH-
T ss_pred             cchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeecCCChHHHHHHH-
Confidence            366667777788999999999999999998876421       1122222   1     24899999998765555543 


Q ss_pred             CCccccccCCCCcEEEeccC
Q psy755           66 GSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus        66 ~~~~l~~~l~~~~iiid~s~   85 (183)
                            ..++++..++..+.
T Consensus       117 ------~~~~~~G~iv~~G~  130 (170)
T d1e3ja2         117 ------NITRTGGTLMLVGM  130 (170)
T ss_dssp             ------HHSCTTCEEEECSC
T ss_pred             ------HHHhcCCceEEEec
Confidence                  45666666665553

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.10  E-value=0.0024  Score=42.98  Aligned_cols=101  Identities=17%  Similarity=0.195  Sum_probs=63.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-----CC-----cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc-
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKE-----GA-----NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI-   70 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-----g~-----~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l-   70 (183)
                      +++++..|.+.| +|++++|++++.+.+.+.     ..     ....+.......+|++|.|+|.+.....-.  ...+ 
T Consensus        30 arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~g~~~~~~~--~~~~~  106 (177)
T d1nvta1          30 ARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDV--EPIVK  106 (177)
T ss_dssp             HHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTTCTTCCSS--CCSSC
T ss_pred             HHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCcccccccccc--cchhh
Confidence            467777787776 899999999998776542     11     112344445568999999998754211110  0001 


Q ss_pred             cccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           71 LKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ...+.++.++.|..-....+.  +.+..++.|..+++
T Consensus       107 ~~~~~~~~~v~D~~y~p~~T~--l~~~a~~~G~~~i~  141 (177)
T d1nvta1         107 AEKLREDMVVMDLIYNPLETV--LLKEAKKVNAKTIN  141 (177)
T ss_dssp             STTCCSSSEEEECCCSSSSCH--HHHHHHTTTCEEEC
T ss_pred             hhccCcccceeeecCCcHhHH--HHHHHHHCCCcccC
Confidence            134567888888886555543  44455677888777

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.07  E-value=0.0058  Score=43.30  Aligned_cols=73  Identities=16%  Similarity=0.233  Sum_probs=49.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.++-.          ..+..+-.=+.++.+++.++   +++.....+=+++
T Consensus        18 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~idil   84 (244)
T d1nffa_          18 MGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------DAARYVHLDVTQPAQWKAAV---DTAVTAFGGLHVL   84 (244)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------GGEEEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----------CcceEEEeecCCHHHHHHHH---HHHHHHhCCCeEE
Confidence            5899999999999999999999998877665310          11112222244666677766   6666655555677


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |+....
T Consensus        85 innAG~   90 (244)
T d1nffa_          85 VNNAGI   90 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            776654

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.04  E-value=0.0094  Score=39.40  Aligned_cols=56  Identities=11%  Similarity=0.090  Sum_probs=38.9

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHH----Hc----C--CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLA----KE----G--ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~----~~----g--~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|.++|..|+..|.  ++++||++++..+...    ..    +  ........+.+++||+|+++...
T Consensus        31 VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVitAg~   98 (160)
T d1i0za1          31 VGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTAGV   98 (160)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEECCSC
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEecCC
Confidence            48899999999988  8999999988753322    11    1  11222334568899999998743

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.01  E-value=0.013  Score=38.31  Aligned_cols=55  Identities=18%  Similarity=0.199  Sum_probs=38.3

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc--------C--C-cccCCHHHHhccCCEEEEecCC
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKE--------G--A-NMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~--------g--~-~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      |.++|..|...+. ++++||+++++.+.....        +  . ....+..+.++++|+|+++...
T Consensus        15 G~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~   81 (150)
T d1t2da1          15 GGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF   81 (150)
T ss_dssp             HHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred             HHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence            6888988888776 899999999875443211        1  1 2223445667899999999853

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=95.96  E-value=0.011  Score=41.18  Aligned_cols=86  Identities=16%  Similarity=0.164  Sum_probs=57.1

Q ss_pred             CCcEE-EEcCCchhHHHHHHc-CC-----cccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEec
Q psy755           13 GHDVI-VYDKNTDASQTLAKE-GA-----NMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDS   83 (183)
Q Consensus        13 g~~V~-~~~~~~~~~~~~~~~-g~-----~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~   83 (183)
                      +.+|+ ++|+++++.+.+.+. ++     ...++.+++++  +.|+|++++|...+.+.++       ..+..|+.|+--
T Consensus        58 ~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~tp~~~H~~~~~-------~al~~gk~v~~E  130 (221)
T d1h6da1          58 HSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSLHAEFAI-------RAFKAGKHVMCE  130 (221)
T ss_dssp             SEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGGHHHHHH-------HHHHTTCEEEEC
T ss_pred             CceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeeccchhhhhhHHH-------HhhhcchhhhcC
Confidence            45666 689999998887664 43     23567888876  5889999999977665553       345567665422


Q ss_pred             c--CCCchhHHHHHHHHHhcCCcE
Q psy755           84 S--TVDPQVPQTLSNLAREKQITF  105 (183)
Q Consensus        84 s--~~~~~~~~~~~~~~~~~g~~~  105 (183)
                      -  +..+.....+.+..++.+..+
T Consensus       131 KPla~~~~e~~~l~~~a~~~~~~~  154 (221)
T d1h6da1         131 KPMATSVADCQRMIDAAKAANKKL  154 (221)
T ss_dssp             SSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred             CCccCCHHHHHHHHHHHHhcCCcE
Confidence            1  234555666777666666544

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.92  E-value=0.014  Score=38.32  Aligned_cols=76  Identities=20%  Similarity=0.324  Sum_probs=48.5

Q ss_pred             HHHHHHhCCC-cEEE-EcCCchh--HHHHHHcCCcccCC-HHHHh-----ccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            5 MARNLLKNGH-DVIV-YDKNTDA--SQTLAKEGANMALS-LSTLA-----SGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         5 iA~~l~~~g~-~V~~-~~~~~~~--~~~~~~~g~~~~~~-~~~~~-----~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      +...|.+... +++. .+|+++.  .+.+.+.++....+ .+++.     .+.|+||+++|.+.+.+..+     .....
T Consensus        20 ~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpag~h~~~~~-----~~~aa   94 (157)
T d1nvmb1          20 MIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAHVQNEA-----LLRQA   94 (157)
T ss_dssp             HHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHHHHHHH-----HHHHH
T ss_pred             HHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEcCCchhHHHhHH-----HHHHH
Confidence            3444544433 5554 5888763  34556667765444 34332     36899999999876665542     22346


Q ss_pred             CCCcEEEeccC
Q psy755           75 KPGVIVIDSST   85 (183)
Q Consensus        75 ~~~~iiid~s~   85 (183)
                      +.|..+||.|+
T Consensus        95 ~~G~~VID~s~  105 (157)
T d1nvmb1          95 KPGIRLIDLTP  105 (157)
T ss_dssp             CTTCEEEECST
T ss_pred             HcCCEEEEccc
Confidence            79999999997

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=95.91  E-value=0.0082  Score=42.74  Aligned_cols=73  Identities=14%  Similarity=0.140  Sum_probs=47.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.+|++++.+...++-          -..+..+-.=+.+.++++.++   +.+...+.+=+++
T Consensus        17 IG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iDil   83 (254)
T d1hdca_          17 LGAEAARQAVAAGARVVLADVLDEEGAATAREL----------GDAARYQHLDVTIEEDWQRVV---AYAREEFGSVDGL   83 (254)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------GGGEEEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------CCceEEEEcccCCHHHHHHHH---HHHHHHcCCccEE
Confidence            689999999999999999999999887765531          011222222244556666665   5555554444566


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |+....
T Consensus        84 VnnAg~   89 (254)
T d1hdca_          84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EecCcc
Confidence            765543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.89  E-value=0.0092  Score=42.59  Aligned_cols=75  Identities=8%  Similarity=0.097  Sum_probs=46.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||.++|+.|++.|++|++.+|+++..+.+.+        +.+....+.+...-+......+.++   +.+...+.+-.++
T Consensus        19 IG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~--------l~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~g~id~l   87 (274)
T d2pd4a1          19 IAYGIAQSCFNQGATLAFTYLNESLEKRVRP--------IAQELNSPYVYELDVSKEEHFKSLY---NSVKKDLGSLDFI   87 (274)
T ss_dssp             HHHHHHHHHHTTTCEEEEEESSTTTHHHHHH--------HHHHTTCCCEEECCTTCHHHHHHHH---HHHHHHTSCEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--------HHhhCCceeEeeecccchhhHHHHH---HHHHHHcCCCCeE
Confidence            5899999999999999999998754333322        1222234455555555555555555   4555555454555


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |+....
T Consensus        88 V~nag~   93 (274)
T d2pd4a1          88 VHSVAF   93 (274)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            555543

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.83  E-value=0.0071  Score=42.94  Aligned_cols=75  Identities=17%  Similarity=0.273  Sum_probs=47.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++.++..+.       +.+.. ..++..+.  +.+..+++.++   +.+.+.+.+=+
T Consensus        17 IG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~-------l~~~~-g~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iD   85 (251)
T d1vl8a_          17 LGFGIAQGLAEAGCSVVVASRNLEEASEAAQK-------LTEKY-GVETMAFRCDVSNYEEVKKLL---EAVKEKFGKLD   85 (251)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHHH-CCCEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHHHh-CCcEEEEEccCCCHHHHHHHH---HHHHHHcCCCC
Confidence            68999999999999999999999887665431       11111 22333332  34556666665   55555554546


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|+....
T Consensus        86 iLVnnAG~   93 (251)
T d1vl8a_          86 TVVNAAGI   93 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            67766543

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=95.78  E-value=0.0074  Score=42.93  Aligned_cols=72  Identities=19%  Similarity=0.269  Sum_probs=47.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.++ +.           ++..+..=+.++.+++.++   +.+...+..=++
T Consensus        17 IG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------~~~~~~~Dvt~~~~v~~~~---~~~~~~~g~iDi   82 (256)
T d1k2wa_          17 IGRAFAEAYVREGARVAIADINLEAARATAAEIGP-----------AACAIALDVTDQASIDRCV---AELLDRWGSIDI   82 (256)
T ss_dssp             HHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCT-----------TEEEEECCTTCHHHHHHHH---HHHHHHHSCCCE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-----------ceEEEEeeCCCHHHHHHHH---HHHHHHhCCccE
Confidence            68999999999999999999999988776553 21           1111122234556666665   555555545456


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      +|+....
T Consensus        83 lVnnAg~   89 (256)
T d1k2wa_          83 LVNNAAL   89 (256)
T ss_dssp             EEECCCC
T ss_pred             EEeeccc
Confidence            6665543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=95.78  E-value=0.009  Score=42.97  Aligned_cols=72  Identities=15%  Similarity=0.178  Sum_probs=46.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.+.          .-.++..+..=+.+...++..+   +.+.+.+.+=.++
T Consensus        17 IG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~----------~~~~~~~~~~Dv~~~~~~~~~~---~~~~~~~g~idil   83 (276)
T d1bdba_          17 LGRALVDRFVAEGAKVAVLDKSAERLAELETD----------HGDNVLGIVGDVRSLEDQKQAA---SRCVARFGKIDTL   83 (276)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------HGGGEEEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH----------cCCCeeEEecccccHHHHHHHH---HHHHHHhCCcccc
Confidence            68999999999999999999999887765542          1112222333344555566655   4555555455566


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |+...
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            65543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.78  E-value=0.037  Score=35.77  Aligned_cols=63  Identities=13%  Similarity=0.123  Sum_probs=41.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHH----HHHcCCcc-cC--CHHHH-----hccCCEEEEecCChHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQT----LAKEGANM-AL--SLSTL-----ASGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~----~~~~g~~~-~~--~~~~~-----~~~adiVi~~vp~~~~~~~v   63 (183)
                      +|..+++.|.+.|++|++.+.++++...    ....+... ..  +.++.     ++.||.|++++++....-.+
T Consensus        14 ~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d~~n~~~   88 (153)
T d1id1a_          14 LAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDADNAFV   88 (153)
T ss_dssp             HHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccHHHHHHH
Confidence            3788999999999999999999875433    33334321 11  11222     56899999999886543333

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.77  E-value=0.0068  Score=43.27  Aligned_cols=31  Identities=10%  Similarity=0.122  Sum_probs=27.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      ||+++|+.|++.|++|++.+|+++++++..+
T Consensus        20 IG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~   50 (259)
T d1xq1a_          20 IGHAIVEEFAGFGAVIHTCARNEYELNECLS   50 (259)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            6899999999999999999999998877654

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=95.73  E-value=0.0078  Score=42.77  Aligned_cols=71  Identities=20%  Similarity=0.259  Sum_probs=47.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++++++.++-            ..+.+++.  +.+..+++.++   +.+...+..=+
T Consensus        18 IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~------------~~~~~~~~~Dv~~~~~~~~~~---~~~~~~~g~iD   82 (253)
T d1hxha_          18 VGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------------GERSMFVRHDVSSEADWTLVM---AAVQRRLGTLN   82 (253)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------------CTTEEEECCCTTCHHHHHHHH---HHHHHHHCSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------------CCCeEEEEeecCCHHHHHHHH---HHHHHHhCCCC
Confidence            689999999999999999999999887765431            11122222  23455666665   55555555556


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|+....
T Consensus        83 ilVnnAG~   90 (253)
T d1hxha_          83 VLVNNAGI   90 (253)
T ss_dssp             EEEECCCC
T ss_pred             eEEecccc
Confidence            67766543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.65  E-value=0.0059  Score=39.78  Aligned_cols=56  Identities=21%  Similarity=0.288  Sum_probs=38.2

Q ss_pred             cHHHHHHHHhCCC--cEEEEcCCchhHHHHHH-------c---CCcccCCHHHHhccCCEEEEecCCh
Q psy755            2 GSHMARNLLKNGH--DVIVYDKNTDASQTLAK-------E---GANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         2 G~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~-------~---g~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      |.++|..|+..|.  ++++||+++++++....       .   ......+..+.+++||+|+++...+
T Consensus        13 G~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~~   80 (146)
T d1hyha1          13 GAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNI   80 (146)
T ss_dssp             HHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSCG
T ss_pred             HHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEecccc
Confidence            7788988887775  89999999987543221       1   1222223345579999999997643

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0064  Score=43.23  Aligned_cols=77  Identities=18%  Similarity=0.237  Sum_probs=49.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++.++..+.-...       ....++..+  =+.+...++.++   +.+...+.+=+
T Consensus        15 IG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-------~~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~G~iD   84 (254)
T d2gdza1          15 IGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-------FEPQKTLFIQCDVADQQQLRDTF---RKVVDHFGRLD   84 (254)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-------SCGGGEEEEECCTTSHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-------cCCCcEEEEEeecCCHHHHHHHH---HHHHHHcCCcC
Confidence            589999999999999999999999877765431010       111222222  244556666766   55555555546


Q ss_pred             EEEeccCCC
Q psy755           79 IVIDSSTVD   87 (183)
Q Consensus        79 iiid~s~~~   87 (183)
                      ++|+.....
T Consensus        85 ilVnnAg~~   93 (254)
T d2gdza1          85 ILVNNAGVN   93 (254)
T ss_dssp             EEEECCCCC
T ss_pred             eeccccccc
Confidence            777766543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.022  Score=40.08  Aligned_cols=32  Identities=19%  Similarity=0.368  Sum_probs=28.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE   32 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~   32 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.++
T Consensus        19 IG~aia~~la~~G~~V~~~~r~~~~l~~~~~~   50 (244)
T d1pr9a_          19 IGRGTVQALHATGARVVAVSRTQADLDSLVRE   50 (244)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHh
Confidence            58999999999999999999999988877654

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=95.57  E-value=0.0097  Score=42.20  Aligned_cols=73  Identities=14%  Similarity=0.263  Sum_probs=48.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++.+.+.+.-          -...++.++.  +.+.++++.++   +.+.+.+.+=+
T Consensus        18 IG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v~~~~---~~~~~~~G~iD   84 (251)
T d1zk4a1          18 IGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV----------GTPDQIQFFQHDSSDEDGWTKLF---DATEKAFGPVS   84 (251)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CCTTTEEEEECCTTCHHHHHHHH---HHHHHHHSSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------CCCCcEEEEEccCCCHHHHHHHH---HHHHHHhCCce
Confidence            689999999999999999999999887765431          0011233332  44556666665   55555555556


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|+....
T Consensus        85 iLVnnAg~   92 (251)
T d1zk4a1          85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            77776544

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.019  Score=41.71  Aligned_cols=79  Identities=15%  Similarity=0.211  Sum_probs=50.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEec--CChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISML--PASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~v--p~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++++...++-   .....+ ....+++.+.+  .+.++++.++   +.+...+.+=.
T Consensus        24 IG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el---~~~~~~-~~~~~~~~~~~Dvs~~~~v~~~~---~~~~~~~G~iD   96 (297)
T d1yxma1          24 IGKAIVKELLELGSNVVIASRKLERLKSAADEL---QANLPP-TKQARVIPIQCNIRNEEEVNNLV---KSTLDTFGKIN   96 (297)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---HHTSCT-TCCCCEEEEECCTTCHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH---Hhhhcc-ccCceEEEEeccCCCHHHHHHHH---HHHHHHhCCeE
Confidence            689999999999999999999998877654320   000000 12345555544  4556666666   55555555556


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|+....
T Consensus        97 iLVnnAg~  104 (297)
T d1yxma1          97 FLVNNGGG  104 (297)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            77776543

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=95.52  E-value=0.012  Score=39.33  Aligned_cols=62  Identities=23%  Similarity=0.286  Sum_probs=40.4

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcc-----cCCHHHHhc---------cCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANM-----ALSLSTLAS---------GAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~---------~adiVi~~vp~~~~~~~v   63 (183)
                      |....+.+...|. +|++.|+++++.+.+.+.|...     .++..+..+         ..|+||.++..+..++..
T Consensus        41 G~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a  117 (182)
T d1vj0a2          41 GLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEG  117 (182)
T ss_dssp             HHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHH
T ss_pred             chhheecccccccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHH
Confidence            5555666667787 7999999999999988887521     123322211         368888888665544444

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.51  E-value=0.0079  Score=42.39  Aligned_cols=74  Identities=12%  Similarity=0.161  Sum_probs=48.2

Q ss_pred             CcHHHHHHHHhCCCc-------EEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEE--EecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHD-------VIVYDKNTDASQTLAKEGANMALSLSTLASGAEFII--SMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~-------V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi--~~vp~~~~~~~v~~~~~~l~   71 (183)
                      ||+++|+.|++.|++       |.+++|++++++.+.++       +.+  ...++.+  .=+.+..+++.++   +.+.
T Consensus        13 IG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~-------~~~--~g~~~~~~~~Dvt~~~~v~~~~---~~~~   80 (240)
T d2bd0a1          13 IGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLE-------CRA--EGALTDTITADISDMADVRRLT---THIV   80 (240)
T ss_dssp             HHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHH-------HHT--TTCEEEEEECCTTSHHHHHHHH---HHHH
T ss_pred             HHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHH-------HHh--cCCcEEEEEecCCCHHHHHHHH---HHHH
Confidence            689999999999987       88899999988776532       111  1122222  2345566666666   5666


Q ss_pred             ccCCCCcEEEeccCC
Q psy755           72 KHAKPGVIVIDSSTV   86 (183)
Q Consensus        72 ~~l~~~~iiid~s~~   86 (183)
                      +.+..=+++|+....
T Consensus        81 ~~~g~iDilvnnAg~   95 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGV   95 (240)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HHcCCcceeeccccc
Confidence            655555677766554

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=95.45  E-value=0.0094  Score=42.43  Aligned_cols=75  Identities=15%  Similarity=0.161  Sum_probs=47.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++.++..+.       +.+. ...++..+.  +.++..++.++   +++.....+=.
T Consensus        21 IG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~-------~~~~-~g~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iD   89 (260)
T d1h5qa_          21 IGLAFTRAVAAAGANVAVIYRSAADAVEVTEK-------VGKE-FGVKTKAYQCDVSNTDIVTKTI---QQIDADLGPIS   89 (260)
T ss_dssp             HHHHHHHHHHHTTEEEEEEESSCTTHHHHHHH-------HHHH-HTCCEEEEECCTTCHHHHHHHH---HHHHHHSCSEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHHH-hCCceEEEEccCCCHHHHHHHH---HHHHHHhCCCc
Confidence            58999999999999999999999877655432       1110 012333332  34556666665   55555554545


Q ss_pred             EEEeccCC
Q psy755           79 IVIDSSTV   86 (183)
Q Consensus        79 iiid~s~~   86 (183)
                      ++|+....
T Consensus        90 ilVnnAg~   97 (260)
T d1h5qa_          90 GLIANAGV   97 (260)
T ss_dssp             EEEECCCC
T ss_pred             Eecccccc
Confidence            66765543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.43  E-value=0.011  Score=41.36  Aligned_cols=99  Identities=15%  Similarity=0.224  Sum_probs=69.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc-CCcccCCHHHH-hccCCEEEEecCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE-GANMALSLSTL-ASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|..+|+.|.+.|..|++.|.++++++.+... |.... ++.+. -..|||++-|--...     +.  ++..+.++ -+
T Consensus        50 VG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~~~~~~~~~cDIl~PcA~~~~-----I~--~~~~~~l~-ak  120 (230)
T d1leha1          50 VAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALGAV-----LN--DFTIPQLK-AK  120 (230)
T ss_dssp             HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCSCC-----BS--TTHHHHCC-CS
T ss_pred             HHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-CCcccccccccEecccccccc-----cC--hHHhhccC-cc
Confidence            37889999999999999999999998887765 55444 44443 458999999875433     21  22334443 36


Q ss_pred             EEEeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           79 IVIDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        79 iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      +|+...+..+.+. ...+.+.++|+.|+..-
T Consensus       121 ~Ive~ANn~~t~~-ea~~~L~~rGI~~iPD~  150 (230)
T d1leha1         121 VIAGSADNQLKDP-RHGKYLHELGIVYAPDY  150 (230)
T ss_dssp             EECCSCSCCBSSH-HHHHHHHHHTCEECCHH
T ss_pred             EEEecccCCCCCc-hHHHHHHhhCcEEEeeh
Confidence            7776666666544 45677888999888843

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.42  E-value=0.0086  Score=38.65  Aligned_cols=55  Identities=22%  Similarity=0.260  Sum_probs=37.9

Q ss_pred             cHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc---------CCcccCCHHHHhccCCEEEEecCC
Q psy755            2 GSHMARNLLKNGH--DVIVYDKNTDASQTLAKE---------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         2 G~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      |.++|..++..+.  +++++|+++++++.....         ......+..+.+++||+|+++...
T Consensus        12 G~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~   77 (140)
T d1a5za1          12 GSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGV   77 (140)
T ss_dssp             HHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred             HHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEeccc
Confidence            6788888887775  899999999876543221         222333345568999999999743

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=95.35  E-value=0.052  Score=34.93  Aligned_cols=56  Identities=11%  Similarity=0.153  Sum_probs=38.4

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHH----HHc----C-C-cccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTL----AKE----G-A-NMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~----~~~----g-~-~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|.++|..++..|.  +++++|+++++++..    ...    + . ....+..+.+++||+|+++.-.
T Consensus        12 VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVitaG~   79 (143)
T d1llda1          12 VGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGP   79 (143)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCC
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEEeccc
Confidence            37889989988887  899999999875432    211    1 1 1222334558899999999844

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.31  E-value=0.017  Score=41.39  Aligned_cols=74  Identities=15%  Similarity=0.204  Sum_probs=45.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc----CCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE----GANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.+.    +..    .    ..+..+..=+.++.+++.++   +.+...+.+
T Consensus        16 IG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~----~----~~~~~~~~Dv~~~~~v~~~~---~~~~~~~G~   84 (274)
T d1xhla_          16 IGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP----A----EKINAVVADVTEASGQDDII---NTTLAKFGK   84 (274)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC----G----GGEEEEECCTTSHHHHHHHH---HHHHHHHSC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCC----C----cceEEEEeeCCCHHHHHHHH---HHHHHHcCC
Confidence            68999999999999999999999887766542    110    0    01112222234556666665   555554444


Q ss_pred             CcEEEeccC
Q psy755           77 GVIVIDSST   85 (183)
Q Consensus        77 ~~iiid~s~   85 (183)
                      =+++|+...
T Consensus        85 iDilVnnAG   93 (274)
T d1xhla_          85 IDILVNNAG   93 (274)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEeecc
Confidence            456666543

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.26  E-value=0.034  Score=39.00  Aligned_cols=32  Identities=25%  Similarity=0.424  Sum_probs=28.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE   32 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~   32 (183)
                      ||+++|+.|++.|++|++.+|++++++++.++
T Consensus        17 IG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~   48 (242)
T d1cyda_          17 IGRDTVKALHASGAKVVAVTRTNSDLVSLAKE   48 (242)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh
Confidence            58999999999999999999999988877654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=95.25  E-value=0.014  Score=41.67  Aligned_cols=74  Identities=18%  Similarity=0.233  Sum_probs=47.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.+|++++++++.+.-.    ..    .....+-+=+.++++++.++   +.+.+.+.+=+++
T Consensus        18 IG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~----~~----~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~iD~l   86 (268)
T d2bgka1          18 IGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG----SP----DVISFVHCDVTKDEDVRNLV---DTTIAKHGKLDIM   86 (268)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----CT----TTEEEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----CC----CceEEEEccCCCHHHHHHHH---HHHHHHcCCccee
Confidence            5899999999999999999999998887665310    00    00111111234556677766   5555555555666


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |+...
T Consensus        87 VnnAG   91 (268)
T d2bgka1          87 FGNVG   91 (268)
T ss_dssp             EECCC
T ss_pred             ccccc
Confidence            76554

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=95.24  E-value=0.017  Score=41.59  Aligned_cols=30  Identities=20%  Similarity=0.321  Sum_probs=26.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~   30 (183)
                      ||+++|+.|++.|++|++.+|+.++.+...
T Consensus        37 IG~aiA~~la~~Ga~Vii~~r~~~~l~~~~   66 (294)
T d1w6ua_          37 LGKGMTTLLSSLGAQCVIASRKMDVLKATA   66 (294)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence            589999999999999999999998876654

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.24  E-value=0.012  Score=42.22  Aligned_cols=76  Identities=9%  Similarity=0.111  Sum_probs=47.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.+.-....      ....++..+.  +.++..++.++   +.+...+.+=.
T Consensus        17 IG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~------~~~~~~~~~~~Dvs~~~~v~~~~---~~~~~~~g~iD   87 (272)
T d1xkqa_          17 IGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG------VSEKQVNSVVADVTTEDGQDQII---NSTLKQFGKID   87 (272)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT------CCGGGEEEEECCTTSHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC------CCCCceEEEEccCCCHHHHHHHH---HHHHHHhCCce
Confidence            6899999999999999999999998877654300000      0111233332  34556666665   55555554556


Q ss_pred             EEEeccC
Q psy755           79 IVIDSST   85 (183)
Q Consensus        79 iiid~s~   85 (183)
                      ++|+...
T Consensus        88 ilvnnAG   94 (272)
T d1xkqa_          88 VLVNNAG   94 (272)
T ss_dssp             EEEECCC
T ss_pred             EEEeCCc
Confidence            6666544

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.21  E-value=0.016  Score=41.20  Aligned_cols=75  Identities=9%  Similarity=0.105  Sum_probs=46.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHH-hccCCEEEE--ecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTL-ASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+++|+.|++.|++|++.+|++++++++.+.       +.+. ....++..+  =+.+...++.++   +.+...+.+=
T Consensus        17 IG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~-------l~~~~~~~~~~~~~~~Dvt~~~~v~~~~---~~~~~~~g~i   86 (264)
T d1spxa_          17 IGRATAVLFAREGAKVTITGRHAERLEETRQQ-------ILAAGVSEQNVNSVVADVTTDAGQDEIL---STTLGKFGKL   86 (264)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHTTCCGGGEEEEECCTTSHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhcCCCcCceEEEEccCCCHHHHHHHH---HHHHHHhCCC
Confidence            58999999999999999999999988776542       0000 001122222  234555666665   5555555555


Q ss_pred             cEEEeccC
Q psy755           78 VIVIDSST   85 (183)
Q Consensus        78 ~iiid~s~   85 (183)
                      +++|+...
T Consensus        87 DilvnnAG   94 (264)
T d1spxa_          87 DILVNNAG   94 (264)
T ss_dssp             CEEEECCC
T ss_pred             CEeecccc
Confidence            66676654

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.20  E-value=0.019  Score=40.58  Aligned_cols=75  Identities=12%  Similarity=0.145  Sum_probs=44.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.+|+++..+.+.+.        .+....+..+-.-+.+..+++.++   +.+.....+=.++
T Consensus        22 IG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~--------~~~~~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~iDil   90 (256)
T d1ulua_          22 LGFAIAAKLKEAGAEVALSYQAERLRPEAEKL--------AEALGGALLFRADVTQDEELDALF---AGVKEAFGGLDYL   90 (256)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--------HHHTTCCEEEECCTTCHHHHHHHH---HHHHHHHSSEEEE
T ss_pred             HHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHh--------hhccCcccccccccCCHHHHHHHH---HHHHHhcCCceEE
Confidence            58999999999999999999987654433221        111112222223344556666665   5555544444567


Q ss_pred             EeccCC
Q psy755           81 IDSSTV   86 (183)
Q Consensus        81 id~s~~   86 (183)
                      |+....
T Consensus        91 Vnnag~   96 (256)
T d1ulua_          91 VHAIAF   96 (256)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            766554

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.19  E-value=0.012  Score=37.34  Aligned_cols=63  Identities=17%  Similarity=0.192  Sum_probs=45.1

Q ss_pred             cHHHHHHHHhCC-CcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            2 GSHMARNLLKNG-HDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         2 G~~iA~~l~~~g-~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      |..+.+.|.+.| ++|+..+.+.+.+.     |...+.++.|+=...|++++++|. ..+..++   ++....
T Consensus        24 g~~v~~~L~~~~~g~v~pVnP~~~~i~-----G~~~y~sl~dlp~~vDlvvi~vp~-~~~~~~~---~~~~~~   87 (129)
T d2csua1          24 GYEVFKNLKEYKKGKVYPVNIKEEEVQ-----GVKAYKSVKDIPDEIDLAIIVVPK-RFVKDTL---IQCGEK   87 (129)
T ss_dssp             HHHHHHHHTTCCSSEEEEECSSCSEET-----TEECBSSTTSCSSCCSEEEECSCH-HHHHHHH---HHHHHH
T ss_pred             HHHHHHHHHHcCCCcEEEeccCccccC-----CeEeecchhhcCCCCceEEEecCh-HHhHHHH---HHHHHc
Confidence            556778887765 58888887654432     666777888877789999999986 5566666   555543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.18  E-value=0.0099  Score=38.38  Aligned_cols=55  Identities=13%  Similarity=0.134  Sum_probs=38.7

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc----------CCc-ccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE----------GAN-MALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~----------g~~-~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|.++|..|+..|.  ++++||+++++.+.....          ... ..++..+.+++||+|+++.-
T Consensus        11 VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag   78 (142)
T d1guza1          11 VGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAG   78 (142)
T ss_dssp             HHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCS
T ss_pred             HHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEe
Confidence            37889999998875  899999999875433211          122 22344566899999999973

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=95.17  E-value=0.024  Score=39.96  Aligned_cols=69  Identities=12%  Similarity=0.201  Sum_probs=45.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      ||+++|+.|++.|++|++.+|+++..+...+.+.             ..+-+=+.+..+++.++   +++.+.+.+=+++
T Consensus        17 IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~-------------~~~~~Dv~~~~~v~~~~---~~~~~~~G~iDiL   80 (248)
T d2d1ya1          17 IGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-------------AFFQVDLEDERERVRFV---EEAAYALGRVDVL   80 (248)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-------------EEEECCTTCHHHHHHHH---HHHHHHHSCCCEE
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC-------------eEEEEeCCCHHHHHHHH---HHHHHhcCCCCeE
Confidence            6899999999999999999999886554433222             12222234556666665   5555555454566


Q ss_pred             EeccC
Q psy755           81 IDSST   85 (183)
Q Consensus        81 id~s~   85 (183)
                      |+...
T Consensus        81 VnnAG   85 (248)
T d2d1ya1          81 VNNAA   85 (248)
T ss_dssp             EECCC
T ss_pred             EEeCc
Confidence            66544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=95.13  E-value=0.022  Score=37.95  Aligned_cols=76  Identities=18%  Similarity=0.135  Sum_probs=49.0

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcc-----cCCHHHHh------ccCCEEEEecCChHHHHHHhcCCcc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANM-----ALSLSTLA------SGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~------~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      |...++.+...|. +|++.|+++++.+.+.+.|...     .++..+.+      ...|+||.++..+..++..+     
T Consensus        40 Gl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~-----  114 (174)
T d1jqba2          40 GLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAV-----  114 (174)
T ss_dssp             HHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHH-----
T ss_pred             hhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHH-----
Confidence            4555565666786 7999999999999998887532     12233322      13789999997766555543     


Q ss_pred             ccccCCCCcEEEecc
Q psy755           70 ILKHAKPGVIVIDSS   84 (183)
Q Consensus        70 l~~~l~~~~iiid~s   84 (183)
                        ..++++..++..+
T Consensus       115 --~~~~~~G~iv~~G  127 (174)
T d1jqba2         115 --KMVKPGGIISNIN  127 (174)
T ss_dssp             --HHEEEEEEEEECC
T ss_pred             --HHHhcCCEEEEEe
Confidence              3445555555554

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=95.09  E-value=0.018  Score=40.51  Aligned_cols=70  Identities=13%  Similarity=0.099  Sum_probs=47.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCCc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPGV   78 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~~   78 (183)
                      +|.++|+.|++.|++|++.+|+.++.++..+.-            +.++.++.  +.++..+++++   +.+...+.+=.
T Consensus        17 IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~Dls~~~~i~~~~---~~i~~~~g~iD   81 (241)
T d2a4ka1          17 IGRAALDLFAREGASLVAVDREERLLAEAVAAL------------EAEAIAVVADVSDPKAVEAVF---AEALEEFGRLH   81 (241)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC------------CSSEEEEECCTTSHHHHHHHH---HHHHHHHSCCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------------CCceEEEEecCCCHHHHHHHH---HHHHHHhCCcc
Confidence            589999999999999999999999877765541            11222222  34556666665   56665555556


Q ss_pred             EEEeccC
Q psy755           79 IVIDSST   85 (183)
Q Consensus        79 iiid~s~   85 (183)
                      ++|+...
T Consensus        82 iLinnAg   88 (241)
T d2a4ka1          82 GVAHFAG   88 (241)
T ss_dssp             EEEEGGG
T ss_pred             Eeccccc
Confidence            6776543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=95.03  E-value=0.038  Score=39.18  Aligned_cols=98  Identities=12%  Similarity=0.038  Sum_probs=66.7

Q ss_pred             HHHHHHhCCCcEEEEcCCchhHHHHHHc----CCc---ccCCHHHHh--ccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            5 MARNLLKNGHDVIVYDKNTDASQTLAKE----GAN---MALSLSTLA--SGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         5 iA~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~---~~~~~~~~~--~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ++..+++.|.+|++.|.|+..++.+.+.    ++.   ...+..+..  ...|+|+..... ..+..++   +.+...|+
T Consensus       134 l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~~~~~~fD~V~ani~~-~~l~~l~---~~~~~~Lk  209 (254)
T d2nxca1         134 LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYA-ELHAALA---PRYREALV  209 (254)
T ss_dssp             HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCH-HHHHHHH---HHHHHHEE
T ss_pred             HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccccccccccchhhhcccc-ccHHHHH---HHHHHhcC
Confidence            5566788899999999999988776642    331   233444443  468998877643 5566665   77788888


Q ss_pred             CCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           76 PGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        76 ~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      +|..++- |.........+.+.+.+.|+..+.
T Consensus       210 pGG~lil-Sgil~~~~~~v~~~~~~~Gf~~~~  240 (254)
T d2nxca1         210 PGGRALL-TGILKDRAPLVREAMAGAGFRPLE  240 (254)
T ss_dssp             EEEEEEE-EEEEGGGHHHHHHHHHHTTCEEEE
T ss_pred             CCcEEEE-EecchhhHHHHHHHHHHCCCEEEE
Confidence            8866553 333445566777888888887666

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.02  E-value=0.034  Score=35.77  Aligned_cols=54  Identities=22%  Similarity=0.145  Sum_probs=37.5

Q ss_pred             cHHHHHHHHhCCC--cEEEEcCCchhHHHHH-------H-cC----CcccCCHHHHhccCCEEEEecCC
Q psy755            2 GSHMARNLLKNGH--DVIVYDKNTDASQTLA-------K-EG----ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         2 G~~iA~~l~~~g~--~V~~~~~~~~~~~~~~-------~-~g----~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      |.++|..|+..|.  +++++|+++++.+.-.       . .+    +....+ .+.++++|+|+++...
T Consensus        12 G~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d-~~~~~~adiVvitag~   79 (142)
T d1ojua1          12 GSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL   79 (142)
T ss_dssp             HHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred             HHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC-HHHhccccEEEEeccc
Confidence            7889988887775  7999999998754311       1 11    122334 4678999999998853

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=94.99  E-value=0.027  Score=39.62  Aligned_cols=74  Identities=19%  Similarity=0.291  Sum_probs=45.0

Q ss_pred             CcHHHHHHHHhCCCcEEEE-cCCchhHHHHHHcCCcccCCHHHHhccCCEEEE--ecCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVY-DKNTDASQTLAKEGANMALSLSTLASGAEFIIS--MLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~--~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+++|+.|++.|++|++. .|+++..+.+.+.       +.+.  ..++.++  =+.+..+++.++   +.+.+...+=
T Consensus        13 IG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~-------~~~~--g~~~~~~~~Dv~~~~~v~~~~---~~~~~~~g~i   80 (244)
T d1edoa_          13 IGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQ-------IEAY--GGQAITFGGDVSKEADVEAMM---KTAIDAWGTI   80 (244)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-------HHHH--TCEEEEEECCTTSHHHHHHHH---HHHHHHSSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-------HHHc--CCcEEEEeCCCCCHHHHHHHH---HHHHHHcCCC
Confidence            6899999999999999885 6777776655432       1111  1222222  234555666665   5555555555


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      +++|+....
T Consensus        81 DiLVnnAg~   89 (244)
T d1edoa_          81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             Ccccccccc
Confidence            667765543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.95  E-value=0.068  Score=35.31  Aligned_cols=42  Identities=10%  Similarity=0.287  Sum_probs=32.1

Q ss_pred             cEEEEcCCchhHHHHHH--------cC----CcccCCHHHHhccCCEEEEecCC
Q psy755           15 DVIVYDKNTDASQTLAK--------EG----ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~--------~g----~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +++++|.++++++....        .+    +...++..+++++||+||++.-.
T Consensus        34 eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vvitag~   87 (167)
T d1u8xx1          34 KLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMAHIRV   87 (167)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEEECCCT
T ss_pred             EEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEEECCCc
Confidence            89999999998763222        12    34567888999999999999854

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.013  Score=41.87  Aligned_cols=76  Identities=14%  Similarity=0.192  Sum_probs=48.6

Q ss_pred             CcHHHHHHHHhC-CCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKN-GHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||.++|+.|++. |+.|++++|++++.+.+.+.       +.+.-.++..+.+=+.+.+.++..+   +.+.....+=++
T Consensus        15 IG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~Dvs~~~sv~~~~---~~~~~~~g~iDi   84 (275)
T d1wmaa1          15 IGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQ-------LQAEGLSPRFHQLDIDDLQSIRALR---DFLRKEYGGLDV   84 (275)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHH-------HHHTTCCCEEEECCTTCHHHHHHHH---HHHHHHHSSEEE
T ss_pred             HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-------HHhcCCcEEEEEEecCCHHHHHHHH---HHHHHhcCCcEE
Confidence            589999999974 89999999999988776543       1111122344444456666676665   555554444456


Q ss_pred             EEeccCC
Q psy755           80 VIDSSTV   86 (183)
Q Consensus        80 iid~s~~   86 (183)
                      +|+....
T Consensus        85 LVnNAGi   91 (275)
T d1wmaa1          85 LVNNAGI   91 (275)
T ss_dssp             EEECCCC
T ss_pred             EEEcCCc
Confidence            7766544

>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Nitric oxide reductase C-terminal domain
species: Moorella thermoacetica [TaxId: 1525]

Probab=94.91  E-value=0.18  Score=32.12  Aligned_cols=118  Identities=10%  Similarity=0.103  Sum_probs=66.5

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCCh-----HHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPAS-----QDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~-----~~~~~v~~~~~~l~~~l~~   76 (183)
                      ...|+..+.+.|++|.+++.+....+.           +...+.++|.|++.+|.-     ..++..+   +.+...-.+
T Consensus        20 A~~Ia~~l~~~g~~v~~~~~~~~~~~~-----------~~~~~~~~d~ii~Gspt~~g~~~~~~~~~l---~~l~~~~~~   85 (149)
T d1ycga1          20 AHALMDGLVAGGCEVKLFKLSVSDRND-----------VIKEILDARAVLVGSPTINNDILPVVSPLL---DDLVGLRPK   85 (149)
T ss_dssp             HHHHHHHHHHTTCEEEEEEGGGSCHHH-----------HHHHHHHCSEEEEECCCBTTBCCGGGHHHH---HHHHHHCCS
T ss_pred             HHHHHHHHHhcCCeeEEEEccccchHH-----------HhhhhhhCCeEEEEeecccCCCCHHHHHHH---HHHhccccC
Confidence            345677777777777777654432221           222345799999999853     2244444   444443335


Q ss_pred             CcEEEec--cCCCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhc
Q psy755           77 GVIVIDS--STVDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus        77 ~~iiid~--s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g  144 (183)
                      ++.+.-.  ..........+.+.+...|...+..|..           ..-...+++..++++++-+.++
T Consensus        86 ~k~~~~fgs~g~~g~a~~~l~~~l~~~g~~~v~~~~~-----------~~~~~P~~~dl~~~~e~g~~ia  144 (149)
T d1ycga1          86 NKVGLAFGAYGWGGGAQKILEERLKAAKIELIAEPGP-----------TVQWVPRGEDLQRCYELGRKIA  144 (149)
T ss_dssp             SCEEEEEEEESSSCCHHHHHHHHHHHTTCEESCSSCC-----------EEESSCCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEecccCCchhHHHHHHHHHHCCCEEeccceE-----------EEcccCCHHHHHHHHHHHHHHH
Confidence            5554322  2333556677888888888877653211           1111225566667776666554

>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain
species: Desulfovibrio gigas [TaxId: 879]

Probab=94.87  E-value=0.24  Score=31.53  Aligned_cols=92  Identities=12%  Similarity=-0.012  Sum_probs=56.0

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCC-----hHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPA-----SQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~-----~~~~~~v~~~~~~l~~~l~~   76 (183)
                      ...|+..|.+.|++|.+++.+....+           .....+.++|.|++..|.     +..++..+   +.+...-.+
T Consensus        20 A~~Ia~~l~~~g~ev~~~~~~~~~~~-----------~~~~~l~~~d~vi~Gspt~~~~~~~~~~~~l---~~~~~~~~~   85 (152)
T d1e5da1          20 ARVLAESFRDEGCTVKLMWCKACHHS-----------QIMSEISDAGAVIVGSPTHNNGILPYVAGTL---QYIKGLRPQ   85 (152)
T ss_dssp             HHHHHHHHHHTTCEEEEEETTTSCHH-----------HHHHHHHTCSEEEEECCCBTTBCCHHHHHHH---HHHHHTCCC
T ss_pred             HHHHHHHHhhCCCEEEEeecccCChh-----------hhccchhhCCEEEEeccccCCccCchhHHHH---HHhhccCCC
Confidence            35677777778888887775543222           122335689999999987     23345554   333332335


Q ss_pred             CcEEEecc--CCCchhHHHHHHHHHhcCCcEEe
Q psy755           77 GVIVIDSS--TVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        77 ~~iiid~s--~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++.+.-.+  +........+.+.+...|++.+.
T Consensus        86 ~k~~~~fgs~g~~~~a~~~~~~~l~~~g~~~v~  118 (152)
T d1e5da1          86 NKIGGAFGSFGWSGESTKVLAEWLTGMGFDMPA  118 (152)
T ss_dssp             SCEEEEEEEESSSCHHHHHHHHHHHHTTCBCCS
T ss_pred             CCEEEEEEeeCCCCccHHHHHHHHHHCCCEEec
Confidence            55543222  33455667888888888887665

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.84  E-value=0.018  Score=41.12  Aligned_cols=31  Identities=29%  Similarity=0.461  Sum_probs=28.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      ||.++|+.|++.|++|++.+|++++++.+.+
T Consensus        26 IG~aiA~~la~~G~~Vil~~r~~~~l~~~~~   56 (269)
T d1xu9a_          26 IGREMAYHLAKMGAHVVVTARSKETLQKVVS   56 (269)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            6999999999999999999999999887654

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.79  E-value=0.019  Score=40.58  Aligned_cols=31  Identities=26%  Similarity=0.266  Sum_probs=27.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~   31 (183)
                      ||+++|+.|++.|++|++.+|+.++.+.+.+
T Consensus        12 iG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~   42 (252)
T d1zmta1          12 GGMGSALRLSEAGHTVACHDESFKQKDELEA   42 (252)
T ss_dssp             THHHHHHHHHHTTCEEEECCGGGGSHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHHHHh
Confidence            6999999999999999999999988777654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=94.76  E-value=0.011  Score=37.93  Aligned_cols=94  Identities=18%  Similarity=0.296  Sum_probs=62.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEE
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iii   81 (183)
                      |..+.+.|.+.||+++.+..++..-+ .  .|.....++.+.-...|+|++++|. ..+..++   ++.... ....+++
T Consensus        29 g~~v~~~L~~~g~~~~~v~~~~~~~~-i--~g~~~~~~l~~i~~~iD~v~v~~p~-~~v~~~v---~~~~~~-g~k~i~~  100 (136)
T d1iuka_          29 AHYVPRYLREQGYRVLPVNPRFQGEE-L--FGEEAVASLLDLKEPVDILDVFRPP-SALMDHL---PEVLAL-RPGLVWL  100 (136)
T ss_dssp             HHHHHHHHHHTTCEEEEECGGGTTSE-E--TTEECBSSGGGCCSCCSEEEECSCH-HHHTTTH---HHHHHH-CCSCEEE
T ss_pred             hHHHHHHHhcCCCCceEEEeccccce-e--eceecccchhhccCCCceEEEeccH-HHHHHHH---HHHHhh-CCCeEEE
Confidence            56778889999999999986653111 1  2556667888876778999999986 5555555   555443 2344554


Q ss_pred             eccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           82 DSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        82 d~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      -.+..    ..++.+.+++.|+.++.
T Consensus       101 q~G~~----~~e~~~~a~~~Gi~vV~  122 (136)
T d1iuka_         101 QSGIR----HPEFEKALKEAGIPVVA  122 (136)
T ss_dssp             CTTCC----CHHHHHHHHHTTCCEEE
T ss_pred             ecCcc----CHHHHHHHHHcCCEEEc
Confidence            33322    23567778888998876

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=94.66  E-value=0.013  Score=37.87  Aligned_cols=56  Identities=13%  Similarity=0.142  Sum_probs=34.7

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHc--------C-CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKE--------G-ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~--------g-~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|.++|..++.++.  ++++||+++++++.....        + ........+.+++||+|+++...
T Consensus        12 VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~   78 (142)
T d1y6ja1          12 VGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGA   78 (142)
T ss_dssp             HHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEeccc
Confidence            37888988988877  899999999865332211        1 11222334557899999998643

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=94.60  E-value=0.14  Score=32.68  Aligned_cols=55  Identities=18%  Similarity=0.167  Sum_probs=37.8

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHc----------CC--cccCCHHHHhccCCEEEEecCCh
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKE----------GA--NMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~----------g~--~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      |.++|..|+.++. +++++|+++++.+.....          ..  ..+.+.+ .++++|+|+++...+
T Consensus        13 G~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~-~~~~advvvitag~~   80 (142)
T d1uxja1          13 GSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA-DTANSDVIVVTSGAP   80 (142)
T ss_dssp             HHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG-GGTTCSEEEECCSCC
T ss_pred             HHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH-HhcCCCEEEEeeecc
Confidence            7788888887776 899999998865432211          12  2234444 468999999999543

>d1l7da2 c.23.12.2 (A:1-143,A:327-377) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Formate/glycerate dehydrogenase catalytic domain-like
family: L-alanine dehydrogenase-like
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.47  E-value=0.26  Score=33.21  Aligned_cols=107  Identities=15%  Similarity=0.193  Sum_probs=68.3

Q ss_pred             HHHHHHHhCCCcEEEEcC---Cch-hHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            4 HMARNLLKNGHDVIVYDK---NTD-ASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~---~~~-~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ..++.|.+.||+|++=.-   ... .=+...+.|....++.+++..++|+|+-.-++...  ..-   ....+.+++|++
T Consensus        21 ~~vkkl~~~G~~V~vE~gaG~~a~fsD~~Y~~aGA~i~~~~~~~~~~~diilkV~~P~~~--e~~---~~ei~~lk~g~~   95 (194)
T d1l7da2          21 EVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTA--EEG---TDEVALIKEGAV   95 (194)
T ss_dssp             HHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEEEECCCCG--GGS---CCGGGGSCTTCE
T ss_pred             HHHHHHHHCCCEEEEEcCcccccCCCHHHHHHhhhhcchhhhhhhhcccceeEecCCccc--ccc---hhHhhhccCceE
Confidence            346788999999997421   111 11334556888888999999999988866543221  110   223467899999


Q ss_pred             EEeccCCCchhHHHHHHHHHhcCCcEEeecccCCHHHH
Q psy755           80 VIDSSTVDPQVPQTLSNLAREKQITFLDAPVSGGTKAA  117 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  117 (183)
                      ++..-  .|.......+.+.++++..+..-......++
T Consensus        96 li~~l--~p~~~~~~~~~l~~~~it~~a~e~ipRisra  131 (194)
T d1l7da2          96 LMCHL--GALTNRPVVEALTKRKITAYAMELMPRISRA  131 (194)
T ss_dssp             EEEEC--CGGGCHHHHHHHHHTTCEEEEGGGCCCSGGG
T ss_pred             EEEec--ccccchhHHHHHHhcCceEEeeecccccCCC
Confidence            88544  4555456677778888888886554443333

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=94.40  E-value=0.0087  Score=35.61  Aligned_cols=23  Identities=22%  Similarity=0.206  Sum_probs=20.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD   24 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~   24 (183)
                      |.++|+.|.+.|++|++||.++.
T Consensus        17 G~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1          17 GLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             HHHHHHHHHHTTCCCEEEESSSS
T ss_pred             HHHHHHHHHHCCCEEEEeeCCcC
Confidence            78899999999999999987554

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=94.36  E-value=0.032  Score=39.24  Aligned_cols=71  Identities=14%  Similarity=0.253  Sum_probs=43.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH-HHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS-QTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+++|+.|++.|++|++.+|++... +...+.          .  ..++..+.  +.+..+++.++   +++...+.+=
T Consensus        17 IG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----------~--g~~~~~~~~Dvs~~~~v~~~~---~~~~~~~G~i   81 (247)
T d2ew8a1          17 IGRAIAERFAVEGADIAIADLVPAPEAEAAIRN----------L--GRRVLTVKCDVSQPGDVEAFG---KQVISTFGRC   81 (247)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH----------T--TCCEEEEECCTTCHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEECCchHHHHHHHHH----------c--CCcEEEEEeeCCCHHHHHHHH---HHHHHHcCCC
Confidence            68999999999999999999987532 221111          0  12222222  34556666665   5555555555


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      +++|+....
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            677766554

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=94.19  E-value=0.17  Score=33.33  Aligned_cols=45  Identities=16%  Similarity=0.279  Sum_probs=33.4

Q ss_pred             CCcEEEEcCCchhHHHHHH--------c----CCcccCCHHHHhccCCEEEEecCCh
Q psy755           13 GHDVIVYDKNTDASQTLAK--------E----GANMALSLSTLASGAEFIISMLPAS   57 (183)
Q Consensus        13 g~~V~~~~~~~~~~~~~~~--------~----g~~~~~~~~~~~~~adiVi~~vp~~   57 (183)
                      +.+++++|+++++++....        .    .+...++..+++++||+|++++..+
T Consensus        31 ~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv~~~~~g   87 (171)
T d1obba1          31 GSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMVG   87 (171)
T ss_dssp             TCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCTT
T ss_pred             CCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEeeecccc
Confidence            3589999999988754322        1    1345678899999999999997543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=94.18  E-value=0.069  Score=37.38  Aligned_cols=73  Identities=7%  Similarity=0.021  Sum_probs=41.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      +|.++|+.|++.|++|++.+|+++..+.+.+.        .........+...+.+.......+   ..+......-.++
T Consensus        19 IG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~   87 (258)
T d1qsga_          19 IAYGIAQAMHREGAELAFTYQNDKLKGRVEEF--------AAQLGSDIVLQCDVAEDASIDTMF---AELGKVWPKFDGF   87 (258)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSTTTHHHHHHH--------HHHTTCCCEEECCTTCHHHHHHHH---HHHHTTCSSEEEE
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH--------HhhcCCcceeecccchHHHHHHHH---HHhhhcccccceE
Confidence            36899999999999999999987655544321        111122334444444544444443   3444444444455


Q ss_pred             Eecc
Q psy755           81 IDSS   84 (183)
Q Consensus        81 id~s   84 (183)
                      ++..
T Consensus        88 v~~a   91 (258)
T d1qsga_          88 VHSI   91 (258)
T ss_dssp             EECC
T ss_pred             EEee
Confidence            5544

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.09  E-value=0.04  Score=34.53  Aligned_cols=60  Identities=20%  Similarity=0.329  Sum_probs=41.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc--cC-CHHHH-----hccCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM--AL-SLSTL-----ASGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~--~~-~~~~~-----~~~adiVi~~vp~~~~~~~v   63 (183)
                      |..+++.|.  |++|.+.+.+++..+.+...|...  .+ +.++.     +.+|+.++++.+++..--.+
T Consensus        12 g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n~~~   79 (129)
T d2fy8a1          12 TLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSETIHC   79 (129)
T ss_dssp             HHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHHHHH
T ss_pred             HHHHHHHHc--CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEeccchhhhHHH
Confidence            566777663  668888999999999888876432  11 12232     46899999999886654444

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=94.08  E-value=0.039  Score=39.17  Aligned_cols=74  Identities=18%  Similarity=0.311  Sum_probs=43.5

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch-hHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD-ASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+++|+.|++.|++|++.+|+.+ ..+.+.+.       +.+  ...+++.+.  +.+..+++.++   +.+.+.+.+=
T Consensus        19 IG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~-------~~~--~g~~~~~~~~Dvt~~~~v~~~~---~~~~~~~G~i   86 (261)
T d1geea_          19 LGKSMAIRFATEKAKVVVNYRSKEDEANSVLEE-------IKK--VGGEAIAVKGDVTVESDVINLV---QSAIKEFGKL   86 (261)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-------HHH--TTCEEEEEECCTTSHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-------HHh--cCCcEEEEEccCCCHHHHHHHH---HHHHHHhCCC
Confidence            589999999999999999998865 34433221       111  112233222  34455566655   5555555444


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      +++|+....
T Consensus        87 DiLVnnAG~   95 (261)
T d1geea_          87 DVMINNAGL   95 (261)
T ss_dssp             CEEEECCCC
T ss_pred             CEeecccee
Confidence            666665543

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.05  E-value=0.081  Score=34.39  Aligned_cols=77  Identities=13%  Similarity=0.170  Sum_probs=49.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc-----CCHHH----HhccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA-----LSLST----LASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~-----~~~~~----~~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      +|...++.+...|.+|++.++++++.+.+.+.|....     ++..+    ...+.+.++++...+..+...+       
T Consensus        39 iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~-------  111 (168)
T d1rjwa2          39 LGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAY-------  111 (168)
T ss_dssp             THHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHH-------
T ss_pred             chhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEeecCCHHHHHHHH-------
Confidence            4666777777889999999999999998888875321     12222    2344666667776655554443       


Q ss_pred             ccCCCCcEEEecc
Q psy755           72 KHAKPGVIVIDSS   84 (183)
Q Consensus        72 ~~l~~~~iiid~s   84 (183)
                      +.++++..++..+
T Consensus       112 ~~l~~~G~i~~~g  124 (168)
T d1rjwa2         112 NSIRRGGACVLVG  124 (168)
T ss_dssp             HHEEEEEEEEECC
T ss_pred             HHhccCCceEecc
Confidence            3455555555443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=94.05  E-value=0.043  Score=39.02  Aligned_cols=74  Identities=22%  Similarity=0.301  Sum_probs=42.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc-hhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT-DASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+++|+.|++.|++|++.+++. +.++.+.+.       +.+.  ..++.++.  +.+.+.++..+   +.+...+..-
T Consensus        30 IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~-------~~~~--g~~~~~~~~D~~~~~~v~~~~---~~~~~~~g~i   97 (272)
T d1g0oa_          30 IGREMAMELGRRGCKVIVNYANSTESAEEVVAA-------IKKN--GSDAACVKANVGVVEDIVRMF---EEAVKIFGKL   97 (272)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH-------HHHT--TCCEEEEECCTTCHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHH-------HHhh--CCceeeEeCCCCCHHHHHHHH---HHHHHHhCCC
Confidence            58999999999999999987764 444443321       1111  12233322  34555566665   5555555454


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      .++++....
T Consensus        98 dilV~nag~  106 (272)
T d1g0oa_          98 DIVCSNSGV  106 (272)
T ss_dssp             CEEEECCCC
T ss_pred             Ccccccccc
Confidence            566655543

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.02  E-value=0.016  Score=40.71  Aligned_cols=32  Identities=22%  Similarity=0.385  Sum_probs=28.4

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE   32 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~   32 (183)
                      ||.++|+.|++.|++|++.+|++++.+...+.
T Consensus        17 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~   48 (248)
T d2o23a1          17 LGLATAERLVGQGASAVLLDLPNSGGEAQAKK   48 (248)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECTTSSHHHHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Confidence            68999999999999999999999988776653

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.87  E-value=0.024  Score=37.33  Aligned_cols=56  Identities=16%  Similarity=0.173  Sum_probs=38.2

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHH----HHc----C--CcccCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTL----AKE----G--ANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~----~~~----g--~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      .|.++|..|...|.  +++++|+++++++..    ...    +  .....+..+.+++||+|+++...
T Consensus        30 VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvitag~   97 (159)
T d2ldxa1          30 VGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIITAGA   97 (159)
T ss_dssp             HHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEECCSC
T ss_pred             HHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEEeccc
Confidence            37889999998887  899999998765432    211    1  11222334557899999998744

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=93.87  E-value=0.053  Score=35.58  Aligned_cols=76  Identities=13%  Similarity=0.128  Sum_probs=48.9

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc---cCCHHH---HhccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM---ALSLST---LASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~---~~~~~~---~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      |...++.+...|.++++.++++++.+.+.+.|...   ..+...   ..+..|++|.++..+..++..+       ..+.
T Consensus        43 G~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~-------~~l~  115 (168)
T d1uufa2          43 GHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFT-------TLLK  115 (168)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCHHHHH-------TTEE
T ss_pred             HHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchhhHHHHhcCCCceeeeeeecchhHHHHH-------HHHh
Confidence            44555555678999999999999988888877532   122222   2346899999997765555543       3455


Q ss_pred             CCcEEEecc
Q psy755           76 PGVIVIDSS   84 (183)
Q Consensus        76 ~~~iiid~s   84 (183)
                      ++..++..+
T Consensus       116 ~~G~iv~~G  124 (168)
T d1uufa2         116 RDGTMTLVG  124 (168)
T ss_dssp             EEEEEEECC
T ss_pred             cCCEEEEec
Confidence            555555554

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=93.82  E-value=0.045  Score=38.72  Aligned_cols=75  Identities=15%  Similarity=0.259  Sum_probs=43.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCc-hhHHHHHHcCCcccCCHHHHhccCCEEEEe--cCChHHHHHHhcCCccccccCCCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNT-DASQTLAKEGANMALSLSTLASGAEFIISM--LPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~adiVi~~--vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      ||+++|+.|++.|++|++.+|++ +..+.+.+.       +.+. ...+++++.  +.+..+++.++   +.+...+.+=
T Consensus        16 IG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~-------~~~~-~g~~~~~~~~Dv~~~~~v~~~~---~~~~~~~G~i   84 (260)
T d1x1ta1          16 IGLGIATALAAQGADIVLNGFGDAAEIEKVRAG-------LAAQ-HGVKVLYDGADLSKGEAVRGLV---DNAVRQMGRI   84 (260)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHH-------HHHH-HTSCEEEECCCTTSHHHHHHHH---HHHHHHHSCC
T ss_pred             HHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH-------HHHh-cCCcEEEEECCCCCHHHHHHHH---HHHHHHhCCC
Confidence            68999999999999999999875 445544321       1110 122333333  33445566655   5555544444


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      +++|+....
T Consensus        85 DiLVnnAG~   93 (260)
T d1x1ta1          85 DILVNNAGI   93 (260)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEeeccc
Confidence            566665543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.75  E-value=0.0062  Score=40.77  Aligned_cols=77  Identities=18%  Similarity=0.188  Sum_probs=47.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchh-HHHH-----HHcCC-----cccCCHHHHhccCCEEEEecCChHHHHHHhcCCccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDA-SQTL-----AKEGA-----NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~-~~~~-----~~~g~-----~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      |++||..|.+.|..|+..+.+... ..+-     ...+.     ...+.+.+....+|+||.+++.+..   .+     -
T Consensus        42 G~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG~p~~---~i-----~  113 (171)
T d1edza1          42 GRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSENY---KF-----P  113 (171)
T ss_dssp             HHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCTTC---CB-----C
T ss_pred             HHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccCCCcc---cc-----C
Confidence            788888888888888777644321 0000     00000     0112256667789999999988541   01     1


Q ss_pred             cccCCCCcEEEeccCC
Q psy755           71 LKHAKPGVIVIDSSTV   86 (183)
Q Consensus        71 ~~~l~~~~iiid~s~~   86 (183)
                      .+++++|.+++|.+..
T Consensus       114 ~d~ik~GavvIDvGi~  129 (171)
T d1edza1         114 TEYIKEGAVCINFACT  129 (171)
T ss_dssp             TTTSCTTEEEEECSSS
T ss_pred             hhhcccCceEeecccc
Confidence            3567899999999864

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.61  E-value=0.21  Score=33.19  Aligned_cols=74  Identities=11%  Similarity=0.157  Sum_probs=44.9

Q ss_pred             CcHHHHHHHHhCC-CcEEEE-cCCchhHHHH-HH-----------------cCCcccCCHHHHhccCCEEEEecCChHHH
Q psy755            1 MGSHMARNLLKNG-HDVIVY-DKNTDASQTL-AK-----------------EGANMALSLSTLASGAEFIISMLPASQDV   60 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~~-~~~~~~~~~~-~~-----------------~g~~~~~~~~~~~~~adiVi~~vp~~~~~   60 (183)
                      ||+.+.+.+.+.+ ++|+.. |+++...... ..                 .++.......+...++|+|+.|+|.....
T Consensus        12 IGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiViecTG~f~~~   91 (178)
T d1b7go1          12 IGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVVDTTPNGVGA   91 (178)
T ss_dssp             HHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEEECCSTTHHH
T ss_pred             HHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEEEECCCCcCCH
Confidence            5888999988664 577764 6666532221 11                 23444556677777889999999875443


Q ss_pred             HHHhcCCccccccCCCCcEEE
Q psy755           61 LDAYDGSDGILKHAKPGVIVI   81 (183)
Q Consensus        61 ~~v~~~~~~l~~~l~~~~iii   81 (183)
                      +.       ...++..|+-+|
T Consensus        92 e~-------a~~hl~~G~KvI  105 (178)
T d1b7go1          92 QY-------KPIYLQLQRNAI  105 (178)
T ss_dssp             HH-------HHHHHHTTCEEE
T ss_pred             HH-------HHHHHHcCCEEE
Confidence            22       344555664444

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=93.49  E-value=0.21  Score=33.08  Aligned_cols=88  Identities=13%  Similarity=0.139  Sum_probs=51.0

Q ss_pred             cHHHHHHHHhCCC-cEEEE-cCCc-h-hHHHHHHc--C-C-cccCCHHHHhccCCEEEEecCChHHHHHHhcCCcccccc
Q psy755            2 GSHMARNLLKNGH-DVIVY-DKNT-D-ASQTLAKE--G-A-NMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKH   73 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~-~~~~-~-~~~~~~~~--g-~-~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~   73 (183)
                      |.-+.+.|.++.+ ++... .++. . ++......  + . ....+.++..+++|+||+++|.....+.+    .    .
T Consensus        14 G~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~~~~~dvvf~a~p~~~s~~~~----~----~   85 (176)
T d1vkna1          14 GLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGASYDLV----R----E   85 (176)
T ss_dssp             HHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTHHHHHH----T----T
T ss_pred             HHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhHhccccceEEEccccHHHHHHH----H----h
Confidence            6778888887754 55543 3322 2 22222111  1 1 12235566667899999999997654433    2    2


Q ss_pred             CCCCcEEEeccCCCch-hHHHHHHHH
Q psy755           74 AKPGVIVIDSSTVDPQ-VPQTLSNLA   98 (183)
Q Consensus        74 l~~~~iiid~s~~~~~-~~~~~~~~~   98 (183)
                      . ++..|||.|+...- +.....++.
T Consensus        86 ~-~~~~VIDlSadfRl~~~~~y~~~Y  110 (176)
T d1vkna1          86 L-KGVKIIDLGADFRFDDPGVYREWY  110 (176)
T ss_dssp             C-CSCEEEESSSTTTCSSHHHHHHHH
T ss_pred             h-ccceEEecCccccccchhhHHHhh
Confidence            2 67889999988654 333333443

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.40  E-value=0.013  Score=41.40  Aligned_cols=32  Identities=31%  Similarity=0.370  Sum_probs=28.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE   32 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~   32 (183)
                      ||+++|+.|++.|++|++.+|++++++.+.+.
T Consensus        18 IG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~   49 (245)
T d2ag5a1          18 IGQAAALAFAREGAKVIATDINESKLQELEKY   49 (245)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence            58999999999999999999999887776554

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.13  E-value=0.066  Score=34.90  Aligned_cols=76  Identities=16%  Similarity=0.086  Sum_probs=47.5

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-----cCCHHHHh----ccCCEEEEecCChHHHHHHhcCCccccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-----ALSLSTLA----SGAEFIISMLPASQDVLDAYDGSDGILK   72 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~----~~adiVi~~vp~~~~~~~v~~~~~~l~~   72 (183)
                      |...++.+...|.+|++.|+++++.+.+.+.|...     .++..+.+    ...+.++.++..+..+...+       +
T Consensus        40 G~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~-------~  112 (166)
T d1llua2          40 GHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAI-------G  112 (166)
T ss_dssp             HHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHH-------T
T ss_pred             HHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccchhHHHHHHHhhcCCcccccccccchHHHHHH-------H
Confidence            56666667778999999999999999988887531     12232222    24566677776665554443       3


Q ss_pred             cCCCCcEEEecc
Q psy755           73 HAKPGVIVIDSS   84 (183)
Q Consensus        73 ~l~~~~iiid~s   84 (183)
                      .++++-.++..+
T Consensus       113 ~l~~~G~iv~~G  124 (166)
T d1llua2         113 MARRGGTIALVG  124 (166)
T ss_dssp             TEEEEEEEEECC
T ss_pred             HhcCCcEEEEEE
Confidence            444554444443

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.03  E-value=0.052  Score=37.89  Aligned_cols=27  Identities=30%  Similarity=0.545  Sum_probs=24.0

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQ   27 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~   27 (183)
                      ||+++|+.|++.|++|++.+|+.+..+
T Consensus        19 IG~aia~~la~~Ga~V~~~~r~~~~~~   45 (237)
T d1uzma1          19 IGLAIAQRLAADGHKVAVTHRGSGAPK   45 (237)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSSCCCT
T ss_pred             HHHHHHHHHHHCCCEEEEEECCcchhc
Confidence            689999999999999999999987643

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=92.96  E-value=0.059  Score=38.00  Aligned_cols=30  Identities=27%  Similarity=0.530  Sum_probs=24.2

Q ss_pred             CcHHHHHHHHhCCCcEEE-EcCCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIV-YDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~-~~~~~~~~~~~~   30 (183)
                      +|.++|+.|++.|++|++ ++++++..+.+.
T Consensus        18 IG~aia~~la~~G~~Vvi~~~~~~~~~~~~~   48 (259)
T d1ja9a_          18 IGRGIAIELGRRGASVVVNYGSSSKAAEEVV   48 (259)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEcCCChHHHHHHH
Confidence            589999999999999987 567776666544

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=92.86  E-value=0.079  Score=34.93  Aligned_cols=62  Identities=13%  Similarity=0.095  Sum_probs=41.1

Q ss_pred             cHHHHHHHHhCCCc-EEEEcCCchhHHHHHHcCCcc-----cCCHHHHhc-----cCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGHD-VIVYDKNTDASQTLAKEGANM-----ALSLSTLAS-----GAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~~-V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~-----~adiVi~~vp~~~~~~~v   63 (183)
                      |...++.+...|.+ |++.|+++++.+.+.+.|...     .++..+.++     ..|+||.++..+...+..
T Consensus        41 G~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~  113 (174)
T d1f8fa2          41 GLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQG  113 (174)
T ss_dssp             HHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHH
T ss_pred             HhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHH
Confidence            55566666666775 556799999999988887531     123333332     379999999876655554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.83  E-value=0.03  Score=39.07  Aligned_cols=29  Identities=21%  Similarity=0.375  Sum_probs=25.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      ||+++|+.|++.|++|++.+|+++.+++.
T Consensus        16 IG~aia~~l~~~Ga~V~~~~r~~~~l~~~   44 (234)
T d1o5ia_          16 IGRAVADVLSQEGAEVTICARNEELLKRS   44 (234)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESCHHHHHHT
T ss_pred             HHHHHHHHHHHCCCEEEEEECCHHHHHhc
Confidence            69999999999999999999998876654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.78  E-value=0.23  Score=34.52  Aligned_cols=26  Identities=23%  Similarity=0.475  Sum_probs=23.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS   26 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~   26 (183)
                      ||.++|+.|+++|++|++.+|+.++.
T Consensus        13 IG~aia~~la~~G~~Vvi~~r~~~~~   38 (266)
T d1mxha_          13 IGHSIAVRLHQQGFRVVVHYRHSEGA   38 (266)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCchHH
Confidence            58999999999999999999987653

>d1pjca2 c.23.12.2 (A:1-135,A:304-361) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Formate/glycerate dehydrogenase catalytic domain-like
family: L-alanine dehydrogenase-like
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=92.62  E-value=0.72  Score=30.87  Aligned_cols=92  Identities=13%  Similarity=0.171  Sum_probs=58.6

Q ss_pred             HHHHHHhCCCcEEEEcCC---chhH-HHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEE
Q psy755            5 MARNLLKNGHDVIVYDKN---TDAS-QTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIV   80 (183)
Q Consensus         5 iA~~l~~~g~~V~~~~~~---~~~~-~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~ii   80 (183)
                      .+..|.+.||+|++=.--   ..-. +...+.|....++.+++. ++|+|+-.-|+..         ++ .+.+++|+++
T Consensus        22 ~vkkl~~~G~~V~VE~gaG~~a~fsD~~Y~~aGa~i~~~~~~~~-~~diilkv~~p~~---------~e-~~~lk~~~~l   90 (193)
T d1pjca2          22 SVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAW-SREMVVKVKEPLP---------AE-YDLMQKDQLL   90 (193)
T ss_dssp             HHHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHH-TSSEEECSSCCCG---------GG-GGGCCTTCEE
T ss_pred             HHHHHHHCCCEEEEEcCcccccCCCHHHHHhhcceeeecccccc-ccceEEEeccCCH---------HH-HHhhhcCceE
Confidence            456788999999975211   1111 233444888887877766 5898876654422         12 3578899998


Q ss_pred             EeccCCCchhHHHHHHHHHhcCCcEEeec
Q psy755           81 IDSSTVDPQVPQTLSNLAREKQITFLDAP  109 (183)
Q Consensus        81 id~s~~~~~~~~~~~~~~~~~g~~~~~~~  109 (183)
                      +..-  .|.......+.+.++++..++.-
T Consensus        91 i~~l--~p~~~~ell~~l~~~~it~~s~E  117 (193)
T d1pjca2          91 FTYL--HLAAARELTEQLMRVGLTAIAYE  117 (193)
T ss_dssp             EECC--CGGGCHHHHHHHHHHTCEEEEGG
T ss_pred             EEec--CcccchHHHHHHHHcCCEEEEee
Confidence            8443  44444566677778888877743

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=92.56  E-value=0.44  Score=31.27  Aligned_cols=62  Identities=18%  Similarity=0.249  Sum_probs=43.1

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCccc------CC-HHHHh-----ccCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMA------LS-LSTLA-----SGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~------~~-~~~~~-----~~adiVi~~vp~~~~~~~v   63 (183)
                      |....+.+...|. +|++.|+++++.+.+.+.|....      ++ .++..     ...|++|.++..+......
T Consensus        42 Gl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a  116 (176)
T d1d1ta2          42 GLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDA  116 (176)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHH
T ss_pred             hHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeCCchHHHHHH
Confidence            5556666777785 79999999999999999875421      11 22211     3699999999876555444

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.36  E-value=0.44  Score=31.14  Aligned_cols=44  Identities=16%  Similarity=0.319  Sum_probs=30.4

Q ss_pred             cEEEEcCCchh--HHHHH--------HcC----CcccCCHHHHhccCCEEEEecCChH
Q psy755           15 DVIVYDKNTDA--SQTLA--------KEG----ANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus        15 ~V~~~~~~~~~--~~~~~--------~~g----~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      +++++|+++++  .+.+.        ..+    ...+++..+.+++||+|+++...+.
T Consensus        32 eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          32 ELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVTTQFRVGG   89 (169)
T ss_dssp             EEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEECCCTTH
T ss_pred             EEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEEEEccccCC
Confidence            89999998864  32221        112    2345678888999999999997543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.25  E-value=0.48  Score=30.18  Aligned_cols=54  Identities=13%  Similarity=0.099  Sum_probs=33.2

Q ss_pred             cHHHHHHHH-hCC--CcEEEEcCCchhHHHHHHc-C--------CcccCCHHHHhccCCEEEEecC
Q psy755            2 GSHMARNLL-KNG--HDVIVYDKNTDASQTLAKE-G--------ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         2 G~~iA~~l~-~~g--~~V~~~~~~~~~~~~~~~~-g--------~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      |.++|..|+ +.+  .++.++|..+.....+... +        ....++..+.++++|+||++--
T Consensus        13 G~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG   78 (145)
T d2cmda1          13 GQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAG   78 (145)
T ss_dssp             HHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCS
T ss_pred             HHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCC
Confidence            678887775 333  5899999865432222221 1        1122344567889999999984

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.19  E-value=0.014  Score=37.71  Aligned_cols=80  Identities=16%  Similarity=0.061  Sum_probs=44.8

Q ss_pred             cHHHHHHHHhCCC---cEEEEcCCchhHHHHHHcC--CcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGH---DVIVYDKNTDASQTLAKEG--ANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~---~V~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |..+.+.|.+++|   ++.....+...-+.....+  ....+...+...++|++|.++|.....+..    +   ....+
T Consensus        15 G~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~~~~~d~vf~a~p~~~s~~~~----~---~~~~~   87 (144)
T d2hjsa1          15 GEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAAEVSRAHA----E---RARAA   87 (144)
T ss_dssp             HHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSCHHHHHHHH----H---HHHHT
T ss_pred             HHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhhhccceEEEecCCcchhhhhc----c---ccccC
Confidence            6778888876655   5665432222111111001  111112233467899999999875543333    2   34568


Q ss_pred             CcEEEeccCCCc
Q psy755           77 GVIVIDSSTVDP   88 (183)
Q Consensus        77 ~~iiid~s~~~~   88 (183)
                      |..|||.|+...
T Consensus        88 g~~VID~Ss~fR   99 (144)
T d2hjsa1          88 GCSVIDLSGALE   99 (144)
T ss_dssp             TCEEEETTCTTT
T ss_pred             CceEEeechhhc
Confidence            899999998654

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.88  E-value=0.04  Score=36.21  Aligned_cols=78  Identities=18%  Similarity=0.196  Sum_probs=46.9

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCccc---C---CHH-HHhccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMA---L---SLS-TLASGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~---~---~~~-~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      |...++.+...|.+|++.|+++++.+.+.+.|....   .   +.. ......|.++.++......  .+   +...+.+
T Consensus        40 G~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~~~~--~~---~~~~~~l  114 (168)
T d1piwa2          40 GSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDI--DF---NIMPKAM  114 (168)
T ss_dssp             HHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTC--CT---TTGGGGE
T ss_pred             chhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEEecCCccc--hH---HHHHHHh
Confidence            455555556779999999999999999988875321   1   111 2234578888887653321  11   2333455


Q ss_pred             CCCcEEEecc
Q psy755           75 KPGVIVIDSS   84 (183)
Q Consensus        75 ~~~~iiid~s   84 (183)
                      +++-.++..+
T Consensus       115 ~~~G~iv~~G  124 (168)
T d1piwa2         115 KVGGRIVSIS  124 (168)
T ss_dssp             EEEEEEEECC
T ss_pred             hccceEEEec
Confidence            5555555444

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.84  E-value=0.19  Score=35.41  Aligned_cols=30  Identities=20%  Similarity=0.356  Sum_probs=23.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEc-CCchhHHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYD-KNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~-~~~~~~~~~~   30 (183)
                      ||+++|+.|++.|++|++.+ ++.+..+.+.
T Consensus        14 IG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~   44 (284)
T d1e7wa_          14 LGRSIAEGLHAEGYAVCLHYHRSAAEANALS   44 (284)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence            68999999999999998854 5555555544

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.69  E-value=0.12  Score=33.22  Aligned_cols=54  Identities=17%  Similarity=0.206  Sum_probs=35.6

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchh--HHH----HHH---c---CCcc---cCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDA--SQT----LAK---E---GANM---ALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~--~~~----~~~---~---g~~~---~~~~~~~~~~adiVi~~v   54 (183)
                      +|.++|..|+..|.  +++++|++++.  .+.    +..   .   ....   .++..+.+++||+|+++.
T Consensus        12 VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVitA   82 (145)
T d1hyea1          12 VGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVIITS   82 (145)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEECC
T ss_pred             HHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEEec
Confidence            37889999998885  99999988642  222    111   1   1111   223446788999999985

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=91.65  E-value=0.11  Score=34.00  Aligned_cols=76  Identities=12%  Similarity=0.065  Sum_probs=48.1

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcc-----cCCHHHHh------ccCCEEEEecCChHHHHHHhcCCcc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANM-----ALSLSTLA------SGAEFIISMLPASQDVLDAYDGSDG   69 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~------~~adiVi~~vp~~~~~~~v~~~~~~   69 (183)
                      |...++.+...|. +|++.++++++.+.+.+.|...     ..+..+..      ...|+||.++..+..++..      
T Consensus        41 G~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a------  114 (170)
T d1jvba2          41 GTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVY------  114 (170)
T ss_dssp             HHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTG------
T ss_pred             eeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhcccccchHHHhh------
Confidence            4445555666675 8999999999999988877421     12222222      2489999999875544433      


Q ss_pred             ccccCCCCcEEEecc
Q psy755           70 ILKHAKPGVIVIDSS   84 (183)
Q Consensus        70 l~~~l~~~~iiid~s   84 (183)
                       ...++++..++..+
T Consensus       115 -~~~l~~~G~iv~~G  128 (170)
T d1jvba2         115 -PKALAKQGKYVMVG  128 (170)
T ss_dssp             -GGGEEEEEEEEECC
T ss_pred             -hhhcccCCEEEEec
Confidence             34556665555554

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.64  E-value=0.055  Score=38.15  Aligned_cols=31  Identities=19%  Similarity=0.360  Sum_probs=26.7

Q ss_pred             CcHHHHHHHHh---CCCcEEEEcCCchhHHHHHH
Q psy755            1 MGSHMARNLLK---NGHDVIVYDKNTDASQTLAK   31 (183)
Q Consensus         1 mG~~iA~~l~~---~g~~V~~~~~~~~~~~~~~~   31 (183)
                      ||.++|+.|++   .|++|++.+|++++++.+.+
T Consensus        18 IG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~   51 (259)
T d1oaaa_          18 FGRALAPQLARLLSPGSVMLVSARSESMLRQLKE   51 (259)
T ss_dssp             HHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHH
T ss_pred             HHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHH
Confidence            58999999986   69999999999998877654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.64  E-value=0.077  Score=35.95  Aligned_cols=55  Identities=11%  Similarity=0.219  Sum_probs=36.6

Q ss_pred             CcHHHHHHHHhCCCcEEE--EcCCchhHHHHHHcC------CcccCCHHHHhccCCEEEEecC
Q psy755            1 MGSHMARNLLKNGHDVIV--YDKNTDASQTLAKEG------ANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~--~~~~~~~~~~~~~~g------~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      +|+.+++.|.+.|++|.+  ..|++++.+.....-      .....+..++++++|.|+.+..
T Consensus        15 iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~   77 (252)
T d2q46a1          15 TGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTS   77 (252)
T ss_dssp             THHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             HHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccccceeeEEEEe
Confidence            699999999999987554  568887655443220      1112234456788999998763

>d5nula_ c.23.5.1 (A:) Flavodoxin {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Flavodoxin
species: Clostridium beijerinckii [TaxId: 1520]

Probab=91.48  E-value=0.91  Score=28.06  Aligned_cols=110  Identities=11%  Similarity=0.104  Sum_probs=61.3

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCCh-------HHHHHHhcCCccccccCC
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPAS-------QDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~-------~~~~~v~~~~~~l~~~l~   75 (183)
                      ..||..|.+.|++|.+++.+..              +..+ +.++|.+++.+|.-       ..+...+   +.+.+.+ 
T Consensus        17 ~~ia~~l~~~g~~v~~~~~~~~--------------~~~~-l~~~~~~i~g~pt~~~g~~p~~~~~~~~---~~~~~~~-   77 (138)
T d5nula_          17 ELIAKGIIESGKDVNTINVSDV--------------NIDE-LLNEDILILGCSAMTDEVLEESEFEPFI---EEISTKI-   77 (138)
T ss_dssp             HHHHHHHHHTTCCCEEEEGGGC--------------CHHH-HTTCSEEEEEECCBTTTBCCTTTHHHHH---HHHGGGC-
T ss_pred             HHHHHHHHhcCCcceecccccc--------------cccc-cccCCeEEEEEeccCCCCCChHHHHHHH---HHhCccC-
Confidence            4566777777777777765432              2333 45789999988752       1233333   4444433 


Q ss_pred             CCcEEEec--cC-CCchhHHHHHHHHHhcCCcEEeecccCCHHHHhcCceEEEecCCHHHHHHHHHHHHHhc
Q psy755           76 PGVIVIDS--ST-VDPQVPQTLSNLAREKQITFLDAPVSGGTKAAQEATLTFMVGGDKSSLEKAKPILKCMG  144 (183)
Q Consensus        76 ~~~iiid~--s~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g  144 (183)
                      +++.+.-.  .. ........+.+.+...|...+..++             ..-+.+++..++++++-+.++
T Consensus        78 ~gk~~~~f~s~g~~~~~~~~~~~~~l~~~G~~~v~~~~-------------~~~~~p~e~~~~~~~~g~~lA  136 (138)
T d5nula_          78 SGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVETPL-------------IVQNEPDEAEQDCIEFGKKIA  136 (138)
T ss_dssp             TTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSCCE-------------EEESSCGGGHHHHHHHHHHHH
T ss_pred             CCCcEEEEEEecCCCCHHHHHHHHHHHHCCCEEecCcE-------------EECCCCcHHHHHHHHHHHHHh
Confidence            45443322  22 2344556777888888876555321             122234456667777666553

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=91.48  E-value=0.73  Score=31.64  Aligned_cols=87  Identities=9%  Similarity=0.132  Sum_probs=52.7

Q ss_pred             CCcEE-EEcCCchhHHHHHHc-CC---cccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccc--cCCCCc-EEEe
Q psy755           13 GHDVI-VYDKNTDASQTLAKE-GA---NMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILK--HAKPGV-IVID   82 (183)
Q Consensus        13 g~~V~-~~~~~~~~~~~~~~~-g~---~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~--~l~~~~-iiid   82 (183)
                      +++|+ ++|+++++.+.+.+. +.   ...++.+++++  +-|+|++++|...+.+.+.   ..+..  ....++ ++++
T Consensus        45 ~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~iD~V~i~tp~~~h~~~~~---~al~aG~~~~~~k~V~~E  121 (237)
T d2nvwa1          45 QFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVKVPEHYEVVK---NILEHSSQNLNLRYLYVE  121 (237)
T ss_dssp             TEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSCHHHHHHHHH---HHHHHSSSCSSCCEEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHhcccccceeecchhhcccccccceeeccCCCcchhhHHH---HHHHhcccccCCceEEEe
Confidence            56777 689999988877654 43   34578898875  5789999999877766553   22221  122334 4444


Q ss_pred             cc-CCCchhHHHHHHHHHhcC
Q psy755           83 SS-TVDPQVPQTLSNLAREKQ  102 (183)
Q Consensus        83 ~s-~~~~~~~~~~~~~~~~~g  102 (183)
                      -= .........+.+..++++
T Consensus       122 KPla~~~~e~~~l~~~a~~~~  142 (237)
T d2nvwa1         122 WALAASVQQAEELYSISQQRA  142 (237)
T ss_dssp             SSSSSSHHHHHHHHHHHHTCT
T ss_pred             ccccCCHHHHHHHHHHHhhcC
Confidence            32 123344556666555553

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.47  E-value=0.15  Score=33.88  Aligned_cols=95  Identities=15%  Similarity=0.113  Sum_probs=59.0

Q ss_pred             HHHHHHHhCCCcEEEEcCCchhHHHHHH----cCC----c-ccCCHHHH---hccCCEEEEecCChHHHHHHhcCCcccc
Q psy755            4 HMARNLLKNGHDVIVYDKNTDASQTLAK----EGA----N-MALSLSTL---ASGAEFIISMLPASQDVLDAYDGSDGIL   71 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~~~~~~~----~g~----~-~~~~~~~~---~~~adiVi~~vp~~~~~~~v~~~~~~l~   71 (183)
                      .++..|++.+.+|+.+|++++.++.+.+    .|.    . ...+..+.   ....|.|++.-+. ...+.++   +.+.
T Consensus        46 ~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D~v~~~~~~-~~~~~~~---~~~~  121 (186)
T d1l3ia_          46 GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGSG-GELQEIL---RIIK  121 (186)
T ss_dssp             HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCCT-TCHHHHH---HHHH
T ss_pred             cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcCEEEEeCcc-ccchHHH---HHHH
Confidence            4566677777799999999998877654    232    1 12344443   2578999988765 4456665   6777


Q ss_pred             ccCCCCcEEEeccCCCchhHHHHHHHHHhcCC
Q psy755           72 KHAKPGVIVIDSSTVDPQVPQTLSNLAREKQI  103 (183)
Q Consensus        72 ~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~  103 (183)
                      ..|++|..++- +...........+.+...+.
T Consensus       122 ~~LkpgG~lvi-~~~~~e~~~~~~~~l~~~~~  152 (186)
T d1l3ia_         122 DKLKPGGRIIV-TAILLETKFEAMECLRDLGF  152 (186)
T ss_dssp             HTEEEEEEEEE-EECBHHHHHHHHHHHHHTTC
T ss_pred             HHhCcCCEEEE-EeeccccHHHHHHHHHHcCC
Confidence            78887765442 22233444455566666553

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.41  E-value=0.046  Score=39.71  Aligned_cols=24  Identities=29%  Similarity=0.380  Sum_probs=21.8

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD   24 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~   24 (183)
                      ||+++|+.|++.|++|++.|++.+
T Consensus        19 IG~aiA~~la~~Ga~Vvi~d~~~~   42 (302)
T d1gz6a_          19 LGRAYALAFAERGALVVVNDLGGD   42 (302)
T ss_dssp             HHHHHHHHHHHTTCEEEEECCCBC
T ss_pred             HHHHHHHHHHHcCCEEEEEeCCch
Confidence            699999999999999999988765

>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: ROO-like flavoprotein TM0755, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=91.27  E-value=0.23  Score=31.51  Aligned_cols=95  Identities=15%  Similarity=0.116  Sum_probs=54.1

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCCh-----HHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPAS-----QDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~-----~~~~~v~~~~~~l~~~l~~   76 (183)
                      ...|+..|.+.|++|.+++.+.....        ........+.++|.+++..|.-     ..+...+   ..+.+...+
T Consensus        21 A~~i~~~l~~~g~~v~~~~~~~~~~~--------~~~~~~~~l~~~d~iiigspt~~~~~~~~~~~~l---~~~~~~~~~   89 (148)
T d1vmea1          21 MKKAIDSLKEKGFTPVVYKFSDEERP--------AISEILKDIPDSEALIFGVSTYEAEIHPLMRFTL---LEIIDKANY   89 (148)
T ss_dssp             HHHHHHHHHHTTCEEEEEEECSSCCC--------CHHHHHHHSTTCSEEEEEECEETTEECHHHHHHH---HHHHHHCCC
T ss_pred             HHHHHHHHHhCCCeEEEEeccccccc--------chhHhhhhHHHCCEeEEEecccCCccCchHHHHH---HHHhhcccC
Confidence            45677888888888887764432200        0011223467899999999742     2334444   444443345


Q ss_pred             CcEEEeccC--CCchhHHHHHHHHHhcCCcEEe
Q psy755           77 GVIVIDSST--VDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        77 ~~iiid~s~--~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++.+.-.++  ........+.+.+...|..++.
T Consensus        90 ~k~~~~fgs~g~~~~a~~~~~~~l~~~G~~~v~  122 (148)
T d1vmea1          90 EKPVLVFGVHGWAPSAERTAGELLKETKFRILS  122 (148)
T ss_dssp             CCEEEEEEECCCCCCC-CCHHHHHHTSSCEEEE
T ss_pred             CCEEEEEEcCCCccchHHHHHHHHHHcCCcEEe
Confidence            655433332  2234456777888888887765

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=90.93  E-value=0.38  Score=31.47  Aligned_cols=62  Identities=15%  Similarity=0.217  Sum_probs=42.3

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcccC-----C--HHHHh-----ccCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMAL-----S--LSTLA-----SGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~-----~--~~~~~-----~~adiVi~~vp~~~~~~~v   63 (183)
                      |....+.+...|. +|++.|+++++.+.+.+.|....-     +  ..+..     ...|+||.++..+......
T Consensus        40 Gl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~  114 (174)
T d1p0fa2          40 GFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNA  114 (174)
T ss_dssp             HHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH
T ss_pred             hHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHH
Confidence            4555566666776 688899999999999998754221     1  22222     2589999999876655444

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.74  E-value=0.14  Score=32.89  Aligned_cols=82  Identities=6%  Similarity=-0.007  Sum_probs=42.4

Q ss_pred             cHHHHHHHHhCC-C---cEEEEcCCchhHHHH--HHcCCcc-cCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccC
Q psy755            2 GSHMARNLLKNG-H---DVIVYDKNTDASQTL--AKEGANM-ALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHA   74 (183)
Q Consensus         2 G~~iA~~l~~~g-~---~V~~~~~~~~~~~~~--~~~g~~~-~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l   74 (183)
                      |+-+.+.|.++. +   +++.+..+...-...  ....... .....+..+++|++|+|+|.....+..    +.+.. -
T Consensus        14 Gqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~DivF~a~~~~~s~~~~----~~~~~-~   88 (146)
T d1t4ba1          14 GSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIY----PKLRE-S   88 (146)
T ss_dssp             HHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHHHTCSEEEECSCHHHHHHHH----HHHHH-T
T ss_pred             HHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhhhcCcEEEEecCchHHHHhh----HHHHh-c
Confidence            566776666553 3   566555443321111  1111111 112223468999999999875543332    33332 1


Q ss_pred             CCCcEEEeccCCCc
Q psy755           75 KPGVIVIDSSTVDP   88 (183)
Q Consensus        75 ~~~~iiid~s~~~~   88 (183)
                      ..+.+|||.|+...
T Consensus        89 g~~~~VID~Ss~fR  102 (146)
T d1t4ba1          89 GWQGYWIDAASSLR  102 (146)
T ss_dssp             TCCCEEEECSSTTT
T ss_pred             CCCeecccCCcccc
Confidence            23357999998643

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=90.62  E-value=0.11  Score=34.17  Aligned_cols=74  Identities=12%  Similarity=0.113  Sum_probs=45.1

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHH----H--hccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLST----L--ASGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~----~--~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      |....+.+...|.+|++.++++++.+.+.+.|....-+..+    .  -..+|+||-++.+  .++..+       +.++
T Consensus        41 G~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~G~--~~~~~~-------~~l~  111 (171)
T d1iz0a2          41 GTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGK--EVEESL-------GLLA  111 (171)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEECSCT--THHHHH-------TTEE
T ss_pred             hhhhhhhhcccccccccccccccccccccccccceeeehhhhhhhhhccccccccccccch--hHHHHH-------HHHh
Confidence            44445555677999999999999999998887643222221    1  2358888887753  233333       3455


Q ss_pred             CCcEEEecc
Q psy755           76 PGVIVIDSS   84 (183)
Q Consensus        76 ~~~iiid~s   84 (183)
                      ++..++..+
T Consensus       112 ~~G~~v~~G  120 (171)
T d1iz0a2         112 HGGRLVYIG  120 (171)
T ss_dssp             EEEEEEEC-
T ss_pred             cCCcEEEEe
Confidence            555555543

>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: Dhaf3308-like
family: Dhaf3308-like
domain: Hypothetical protein Dhaf 3308
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=90.55  E-value=0.29  Score=34.31  Aligned_cols=86  Identities=13%  Similarity=0.133  Sum_probs=55.1

Q ss_pred             HHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccC
Q psy755            6 ARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSST   85 (183)
Q Consensus         6 A~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~   85 (183)
                      ...+.+.|.++++++|++..       |.......++++.+||+||++-.  .-+...+   +.+...-++...++-.+-
T Consensus       134 v~~l~~~~~~~~VlE~~p~~-------gd~p~~~~~~lLp~aD~viiTGs--TlvN~Tl---~~LL~~~~~a~~vvl~GP  201 (251)
T d2h1qa1         134 LESLLEPICDLSILEWSPEE-------GDYPLPASEFILPECDYVYITCA--SVVDKTL---PRLLELSRNARRITLVGP  201 (251)
T ss_dssp             HHHHHTTTSEEEEEESSCCT-------TCEEGGGHHHHGGGCSEEEEETH--HHHHTCH---HHHHHHTTTSSEEEEEST
T ss_pred             HHHHHhcCCcEEEEeCCCCC-------CCCCchHHHHhhhcCCEEEEEec--hhhcCCH---HHHHHhCCcCCEEEEECC
Confidence            34567778899999998753       33334456778899999999962  3344444   667777767766665554


Q ss_pred             CCchhHHHHHHHHHhcCCcEEee
Q psy755           86 VDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        86 ~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      +.|-..    +.+ +.|+.++..
T Consensus       202 S~p~~P----~lf-~~Gv~~lag  219 (251)
T d2h1qa1         202 GTPLAP----VLF-EHGLQELSG  219 (251)
T ss_dssp             TCCCCG----GGG-GTTCSEEEE
T ss_pred             CcccCH----HHH-hcCCceEeE
Confidence            444332    122 367777774

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=90.38  E-value=0.21  Score=34.72  Aligned_cols=73  Identities=11%  Similarity=0.185  Sum_probs=44.4

Q ss_pred             CcHHHHHHHHhCCC--cEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC--
Q psy755            1 MGSHMARNLLKNGH--DVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP--   76 (183)
Q Consensus         1 mG~~iA~~l~~~g~--~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~--   76 (183)
                      ||.++|+.|++.|+  .|++..|+.++++.+.+..-          .+..++.+=+.+...++.++   +.+...+..  
T Consensus        15 IG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~----------~~~~~~~~Dvs~~~~v~~~~---~~i~~~~~~~~   81 (250)
T d1yo6a1          15 IGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD----------SRVHVLPLTVTCDKSLDTFV---SKVGEIVGSDG   81 (250)
T ss_dssp             HHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCC----------TTEEEEECCTTCHHHHHHHH---HHHHHHHGGGC
T ss_pred             HHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhC----------CceEEEEEecCCHHHHHHHH---HHHHHHhCCCC
Confidence            58999999999996  57777999998877654310          12233333355556666665   444443322  


Q ss_pred             CcEEEeccCC
Q psy755           77 GVIVIDSSTV   86 (183)
Q Consensus        77 ~~iiid~s~~   86 (183)
                      =.++|+....
T Consensus        82 idilinnAG~   91 (250)
T d1yo6a1          82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             eEEEEEcCcc
Confidence            2456665543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=89.69  E-value=0.85  Score=29.74  Aligned_cols=63  Identities=17%  Similarity=0.208  Sum_probs=43.2

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcccC-------CHHHHh-----ccCCEEEEecCChHHHHHHh
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMAL-------SLSTLA-----SGAEFIISMLPASQDVLDAY   64 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~-----~~adiVi~~vp~~~~~~~v~   64 (183)
                      |...++.+...|. .|++.|+++++.+.+.+.|....-       ...+..     ...|+||.|+..+..+...+
T Consensus        41 Gl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~  116 (174)
T d1e3ia2          41 GLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAV  116 (174)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHH
Confidence            4555666667787 688889999999999988753221       112222     35899999998877665553

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=89.67  E-value=0.83  Score=29.58  Aligned_cols=62  Identities=18%  Similarity=0.250  Sum_probs=42.2

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCccc-------CCHHHHh-----ccCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMA-------LSLSTLA-----SGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~-----~~adiVi~~vp~~~~~~~v   63 (183)
                      |...+..++..|. +|++.++++++.+.+.+.|....       +...+..     ...|++|.++..+...+..
T Consensus        41 G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a  115 (176)
T d2jhfa2          41 GLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTA  115 (176)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHH
Confidence            5566777777775 78888999999999888874321       1122222     2589999999876555444

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.65  E-value=0.24  Score=32.23  Aligned_cols=45  Identities=13%  Similarity=0.254  Sum_probs=33.5

Q ss_pred             CcEEEEcCCchhHHHHHHc---------CCcccCCHHHHhccCCEEEEecCChH
Q psy755           14 HDVIVYDKNTDASQTLAKE---------GANMALSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus        14 ~~V~~~~~~~~~~~~~~~~---------g~~~~~~~~~~~~~adiVi~~vp~~~   58 (183)
                      .+++++|+++++.+.....         ......+..+.+++||+|+++.-.+.
T Consensus        30 ~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~~~~   83 (162)
T d1up7a1          30 DEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFRPGG   83 (162)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCCTTH
T ss_pred             cEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEecccCC
Confidence            4899999999987654331         13445678888999999999986543

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.46  E-value=0.058  Score=37.24  Aligned_cols=26  Identities=27%  Similarity=0.379  Sum_probs=23.3

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDAS   26 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~   26 (183)
                      ||+++|+.|++.|++|++.+|+++..
T Consensus        13 IG~aiA~~la~~Ga~V~i~~~~~~~~   38 (241)
T d1uaya_          13 LGRAAALALKARGYRVVVLDLRREGE   38 (241)
T ss_dssp             HHHHHHHHHHHHTCEEEEEESSCCSS
T ss_pred             HHHHHHHHHHHCCCEEEEEECCcccc
Confidence            68999999999999999999988653

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=89.42  E-value=0.37  Score=33.67  Aligned_cols=29  Identities=21%  Similarity=0.318  Sum_probs=23.2

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTL   29 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~   29 (183)
                      ||.++|+.|++.|++|++..|+.++.+.+
T Consensus        17 IG~~~A~~la~~G~~vii~~r~~~~~~~~   45 (254)
T d1sbya1          17 IGLDTSRELVKRNLKNFVILDRVENPTAL   45 (254)
T ss_dssp             HHHHHHHHHHHTCCSEEEEEESSCCHHHH
T ss_pred             HHHHHHHHHHHCCCEEEEEECCcccHHHH
Confidence            58999999999999988887666654443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=89.34  E-value=0.24  Score=31.56  Aligned_cols=54  Identities=9%  Similarity=0.105  Sum_probs=33.7

Q ss_pred             cHHHHHHHHhCCC--cEEEEcCCch--hHH----HHHH---c--CCcccCCHHHHhccCCEEEEecC
Q psy755            2 GSHMARNLLKNGH--DVIVYDKNTD--ASQ----TLAK---E--GANMALSLSTLASGAEFIISMLP   55 (183)
Q Consensus         2 G~~iA~~l~~~g~--~V~~~~~~~~--~~~----~~~~---~--g~~~~~~~~~~~~~adiVi~~vp   55 (183)
                      |.++|..+...+.  +++++|++..  ..+    .+..   .  .........+.+++||+|+++.-
T Consensus        13 G~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvitaG   79 (142)
T d1o6za1          13 GAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAG   79 (142)
T ss_dssp             HHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCC
T ss_pred             HHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEEecc
Confidence            7888999998887  8999997542  222    1111   1  12222222345689999999863

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=89.18  E-value=1  Score=29.38  Aligned_cols=79  Identities=16%  Similarity=0.236  Sum_probs=45.1

Q ss_pred             CcHHHHHHHHhCC-CcEEE-EcCCchhH-HHHHHc------------------CCcccCCHHHHhccCCEEEEecCChHH
Q psy755            1 MGSHMARNLLKNG-HDVIV-YDKNTDAS-QTLAKE------------------GANMALSLSTLASGAEFIISMLPASQD   59 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~-~~~~~~~~-~~~~~~------------------g~~~~~~~~~~~~~adiVi~~vp~~~~   59 (183)
                      ||+.+.+.+...+ .+|+. .|+++... ..+...                  +.....+..++..++|+|+.|+|....
T Consensus        12 IGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDvViEcTG~f~~   91 (171)
T d1cf2o1          12 VGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIVIDCTPEGIG   91 (171)
T ss_dssp             HHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEEEECCSTTHH
T ss_pred             HHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCEEEEccCCCCC
Confidence            5788888877665 46664 46665432 222221                  233334556666789999999987554


Q ss_pred             HHHHhcCCccccccCCCCcEEEeccCC
Q psy755           60 VLDAYDGSDGILKHAKPGVIVIDSSTV   86 (183)
Q Consensus        60 ~~~v~~~~~~l~~~l~~~~iiid~s~~   86 (183)
                      .+.       ...++..|.-+|-.++.
T Consensus        92 ~~~-------~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          92 AKN-------LKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             HHH-------HHHHHHTTCEEEECTTS
T ss_pred             HHH-------HHHHHHcCCCEEEECCC
Confidence            333       34556666555544443

>d2fz5a1 c.23.5.1 (A:1-137) Flavodoxin {Megasphaera elsdenii [TaxId: 907]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Flavodoxin
species: Megasphaera elsdenii [TaxId: 907]

Probab=89.13  E-value=1.5  Score=26.95  Aligned_cols=90  Identities=12%  Similarity=0.121  Sum_probs=53.4

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCCh------H-HHHHHhcCCccccccC
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPAS------Q-DVLDAYDGSDGILKHA   74 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~------~-~~~~v~~~~~~l~~~l   74 (183)
                      ...|+..|.+.|++|.+++.+..              ++.+ +.++|.|++.+|.-      . ..+..+   +.+.+.+
T Consensus        17 A~~ia~~l~~~g~~v~~~~~~~~--------------~~~~-l~~~d~ii~g~pT~~~g~~p~~~~~~~~---~~~~~~~   78 (137)
T d2fz5a1          17 ANEIEAAVKAAGADVESVRFEDT--------------NVDD-VASKDVILLGCPAMGSEELEDSVVEPFF---TDLAPKL   78 (137)
T ss_dssp             HHHHHHHHHHTTCCEEEEETTSC--------------CHHH-HHTCSEEEEECCCBTTTBCCHHHHHHHH---HHHGGGC
T ss_pred             HHHHHHHHHhcCCceEEeehhhH--------------HHhh-hhccceEEEEEecccCCcCChhHHHHHH---HHhcccc
Confidence            34577777777888877765442              2334 45689999998741      2 233333   4444444


Q ss_pred             CCCcEE--Eecc-CCCchhHHHHHHHHHhcCCcEEeecc
Q psy755           75 KPGVIV--IDSS-TVDPQVPQTLSNLAREKQITFLDAPV  110 (183)
Q Consensus        75 ~~~~ii--id~s-~~~~~~~~~~~~~~~~~g~~~~~~~~  110 (183)
                       +|+.+  ..+. .........+.+.+...|...+..++
T Consensus        79 -~gk~~~~fgs~g~~~~~a~~~l~~~l~~~G~~~v~~~~  116 (137)
T d2fz5a1          79 -KGKKVGLFGSYGWGSGEWMDAWKQRTEDTGATVIGTAI  116 (137)
T ss_dssp             -SSCEEEEEEEESSCCSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             -CCCeEEEEEecCCCcCHHHHHHHHHHHHCCCEEeecee
Confidence             44433  2222 23445567788888888988777443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=89.13  E-value=0.15  Score=35.66  Aligned_cols=27  Identities=15%  Similarity=0.180  Sum_probs=24.1

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHH
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQ   27 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~   27 (183)
                      ||.++|+.|++.|++|++.+|+.++..
T Consensus        20 IG~aiA~~la~~Ga~Vil~~~~~~~~~   46 (268)
T d2h7ma1          20 IAFHIARVAQEQGAQLVLTGFDRLRLI   46 (268)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSCHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEeCChHHHH
Confidence            589999999999999999999988753

>d1dlja3 c.26.3.1 (A:295-402) UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.86  E-value=0.17  Score=30.67  Aligned_cols=51  Identities=12%  Similarity=0.208  Sum_probs=36.8

Q ss_pred             HHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCC
Q psy755            4 HMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         4 ~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      -+...|.+.|.+|.+||..-...+.  ..+.....++.+..+.+|+|++....
T Consensus        39 ~ii~~L~~~g~~v~iyDP~v~~~~~--~~~~~~~~~l~~~~~~sDiII~~~~~   89 (108)
T d1dlja3          39 DVIDILKSKDIKIIIYEPMLNKLES--EDQSVLVNDLENFKKQANIIVTNRYD   89 (108)
T ss_dssp             HHHHHHHTSSCEEEEECTTCSCCCT--TCCSEECCCHHHHHHHCSEEECSSCC
T ss_pred             HHHHHHhccccceeeecCCcChhHh--ccCCEEEeCHHHHHhhCCEEEEcCCc
Confidence            4677888999999999976543211  12455677899999999987766654

>d1f4pa_ c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: Flavodoxin
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=88.83  E-value=0.58  Score=29.65  Aligned_cols=89  Identities=12%  Similarity=0.200  Sum_probs=51.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCC--------hHHHHHHhcCCcccccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPA--------SQDVLDAYDGSDGILKH   73 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~--------~~~~~~v~~~~~~l~~~   73 (183)
                      +..|+..|.+.|++|.+++.+.-              +..+..+++|+||+.+|.        +......+   +.+.+.
T Consensus        18 A~~i~~~l~~~g~~v~~~~~~~~--------------~~~~~~~~~~~vii~~sT~g~g~~~~~~~~~~f~---~~l~~~   80 (147)
T d1f4pa_          18 AETIARELADAGYEVDSRDAASV--------------EAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLF---DSLEET   80 (147)
T ss_dssp             HHHHHHHHHHHTCEEEEEEGGGC--------------CSTTTTTTCSEEEEEECEECSSSCEECTTTHHHH---HTGGGS
T ss_pred             HHHHHHHHHHCCCeEEEEecccc--------------chhhhhcccCeEEEEecccCCcCCChhhhHHHhh---hccccc
Confidence            34567777777887777765432              222334578988887753        23455555   555543


Q ss_pred             CCCCcE--EEeccCCC-c---hhHHHHHHHHHhcCCcEEe
Q psy755           74 AKPGVI--VIDSSTVD-P---QVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        74 l~~~~i--iid~s~~~-~---~~~~~~~~~~~~~g~~~~~  107 (183)
                      -.+++.  |+-+++.. +   .....+.+.+...|...+.
T Consensus        81 ~l~~~~~avfGlGds~y~~f~~a~~~l~~~l~~lGa~~v~  120 (147)
T d1f4pa_          81 GAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQ  120 (147)
T ss_dssp             CCTTCEEEEEEEECTTSSSTTHHHHHHHHHHHHTTCEECS
T ss_pred             cccCCcEEEEecCCccHHHHhHHHHHHHHHHHhCCCEEee
Confidence            335654  34433332 2   3456777788777776554

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.76  E-value=1.1  Score=29.23  Aligned_cols=77  Identities=19%  Similarity=0.223  Sum_probs=41.8

Q ss_pred             CcHHHHHHHHhCC-CcEEE-EcCCchhH-HHHHHc------------------CCcccCCHHHHhccCCEEEEecCChHH
Q psy755            1 MGSHMARNLLKNG-HDVIV-YDKNTDAS-QTLAKE------------------GANMALSLSTLASGAEFIISMLPASQD   59 (183)
Q Consensus         1 mG~~iA~~l~~~g-~~V~~-~~~~~~~~-~~~~~~------------------g~~~~~~~~~~~~~adiVi~~vp~~~~   59 (183)
                      ||+.+.+.+.+.. .+|+. .|.+++.. ..+...                  +.....+..+...++|+|+.|+|....
T Consensus        13 IGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDvViEcTG~f~~   92 (172)
T d2czca2          13 IGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDIIVDATPGGIG   92 (172)
T ss_dssp             HHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEEEECCSTTHH
T ss_pred             HHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCEEEECCCCCCC
Confidence            5788888887654 46554 46665432 222221                  233344555666678888888876544


Q ss_pred             HHHHhcCCccccccCCCCcEEEecc
Q psy755           60 VLDAYDGSDGILKHAKPGVIVIDSS   84 (183)
Q Consensus        60 ~~~v~~~~~~l~~~l~~~~iiid~s   84 (183)
                      .+..       ..++..|.-.|-.|
T Consensus        93 ~~~~-------~~hl~~G~k~Vi~s  110 (172)
T d2czca2          93 AKNK-------PLYEKAGVKAIFQG  110 (172)
T ss_dssp             HHHH-------HHHHHHTCEEEECT
T ss_pred             HHHH-------HHHHHcCCCEEEEC
Confidence            3332       34555554444333

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=88.66  E-value=0.27  Score=35.62  Aligned_cols=54  Identities=20%  Similarity=0.252  Sum_probs=38.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHHHHHHc------C---------CcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQTLAKE------G---------ANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~------g---------~~~~~~~~~~~~~adiVi~~v   54 (183)
                      +|+.++..|.++|++|.+..|+.++.+.+.+.      .         +....+..+++.++|.|+-+.
T Consensus        23 IGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~a   91 (342)
T d1y1pa1          23 VASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIA   91 (342)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEECC
T ss_pred             HHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhhc
Confidence            48899999999999999999988776654431      0         112234456778899888655

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=88.58  E-value=0.098  Score=36.43  Aligned_cols=24  Identities=21%  Similarity=0.383  Sum_probs=21.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCch
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTD   24 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~   24 (183)
                      ||+++|+.|++.|++|++.||+++
T Consensus        13 IG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_          13 IGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             HHHHHHHHHHHCCCEEEEEECChH
Confidence            689999999999999999998764

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.51  E-value=0.57  Score=28.18  Aligned_cols=57  Identities=19%  Similarity=0.080  Sum_probs=36.3

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchh-HHHHHHc-CCccc--CCHHHHhccCCEEEEecCChH
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDA-SQTLAKE-GANMA--LSLSTLASGAEFIISMLPASQ   58 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~-~~~~~~~-g~~~~--~~~~~~~~~adiVi~~vp~~~   58 (183)
                      |..-++.|.+.|.+|++++..... ...+.+. ++...  .-.++.+.++++|+.++.++.
T Consensus        24 a~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at~d~~   84 (113)
T d1pjqa1          24 AERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDT   84 (113)
T ss_dssp             HHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHH
T ss_pred             HHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecCCCHH
Confidence            566788899999999999765543 3333333 22211  112344678999999987754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.22  E-value=0.32  Score=33.70  Aligned_cols=30  Identities=17%  Similarity=0.366  Sum_probs=24.8

Q ss_pred             CcHHHHHHHH---hCCCcEEEEcCCchhHHHHH
Q psy755            1 MGSHMARNLL---KNGHDVIVYDKNTDASQTLA   30 (183)
Q Consensus         1 mG~~iA~~l~---~~g~~V~~~~~~~~~~~~~~   30 (183)
                      ||+++|+.|+   +.|++|++.+|++++++.+.
T Consensus        14 IG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~   46 (248)
T d1snya_          14 LGLGLVKALLNLPQPPQHLFTTCRNREQAKELE   46 (248)
T ss_dssp             HHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            5889999885   57899999999998876653

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.92  E-value=0.38  Score=31.28  Aligned_cols=76  Identities=13%  Similarity=0.031  Sum_probs=46.2

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCcc----cCCH-HHHh-----ccCCEEEEecCChHHHHHHhcCCccc
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANM----ALSL-STLA-----SGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~----~~~~-~~~~-----~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      |...++.+...|. .|++.|+++++.+.+.+.|...    .++. ++..     ...|+||.++.....++..+      
T Consensus        45 G~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~------  118 (172)
T d1h2ba2          45 GHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTP------  118 (172)
T ss_dssp             HHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGG------
T ss_pred             HHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCcchHHHHHH------
Confidence            3444444555564 6778899999999888886431    1222 2222     24899999998766555543      


Q ss_pred             cccCCCCcEEEecc
Q psy755           71 LKHAKPGVIVIDSS   84 (183)
Q Consensus        71 ~~~l~~~~iiid~s   84 (183)
                       ..++++-.++-.+
T Consensus       119 -~~l~~~G~iv~~G  131 (172)
T d1h2ba2         119 -YLLGRMGRLIIVG  131 (172)
T ss_dssp             -GGEEEEEEEEECC
T ss_pred             -HHHhCCCEEEEEe
Confidence             4455555554443

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=87.62  E-value=0.1  Score=36.05  Aligned_cols=25  Identities=28%  Similarity=0.401  Sum_probs=22.7

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA   25 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~   25 (183)
                      ||.++|+.|+++|++|++.||+++.
T Consensus        14 IG~aia~~l~~~G~~V~~~~~~~~~   38 (235)
T d1ooea_          14 LGSAILEFFKKNGYTVLNIDLSAND   38 (235)
T ss_dssp             HHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred             HHHHHHHHHHHCCCEEEEEECCchh
Confidence            6899999999999999999998754

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=87.51  E-value=2.1  Score=27.89  Aligned_cols=89  Identities=11%  Similarity=0.161  Sum_probs=51.5

Q ss_pred             CcHHHHHHHHhCCC-------cEEEEcCCch--hHHHHHH---c-------CCcccCCHHHHhccCCEEEEecCChH---
Q psy755            1 MGSHMARNLLKNGH-------DVIVYDKNTD--ASQTLAK---E-------GANMALSLSTLASGAEFIISMLPASQ---   58 (183)
Q Consensus         1 mG~~iA~~l~~~g~-------~V~~~~~~~~--~~~~~~~---~-------g~~~~~~~~~~~~~adiVi~~vp~~~---   58 (183)
                      +|.+++..|++.+.       ++.++|.+..  .++...-   .       ....+++..+.++++|+||++-..+.   
T Consensus        36 Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDvVvi~ag~~rkpg  115 (175)
T d7mdha1          36 ISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPG  115 (175)
T ss_dssp             HHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEEEECCCCCCCTT
T ss_pred             HHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCceEEEeeccCCCCC
Confidence            36788888876432       5666776653  2232221   1       23556788899999999999983331   


Q ss_pred             -H-----------HHHHhcCCccccccCCCCcEEEeccCCCchhHHHH
Q psy755           59 -D-----------VLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTL   94 (183)
Q Consensus        59 -~-----------~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~   94 (183)
                       .           ++.+.   +.+.++-+++..|+-.|+  |.+....
T Consensus       116 ~tR~Dll~~N~~I~k~~~---~~i~~~a~~~~~vlvv~N--Pvd~~t~  158 (175)
T d7mdha1         116 MERAALLDINGQIFADQG---KALNAVASKNVKVLVVGN--PCNTNAL  158 (175)
T ss_dssp             CCHHHHHHHHHHHHHHHH---HHHHHHSCTTCEEEECSS--SHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHH---HHHHhhCCCCcEEEEecC--cHHHHHH
Confidence             1           22222   444555455666655554  6655444

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=87.48  E-value=0.32  Score=31.16  Aligned_cols=42  Identities=10%  Similarity=-0.107  Sum_probs=26.9

Q ss_pred             HHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCc
Q psy755           42 TLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDP   88 (183)
Q Consensus        42 ~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~   88 (183)
                      +..+++|+||+|+|.....+-+    +.+.+. ....+|||.|+...
T Consensus        60 ~~~~~~DvvF~alp~~~s~~~~----~~l~~~-g~~~~VIDlSsdfR  101 (147)
T d1mb4a1          60 ESLKQLDAVITCQGGSYTEKVY----PALRQA-GWKGYWIDAASTLR  101 (147)
T ss_dssp             HHHTTCSEEEECSCHHHHHHHH----HHHHHT-TCCSEEEESSSTTT
T ss_pred             hhhccccEEEEecCchHHHHHh----HHHHHc-CCceEEEeCCcccc
Confidence            4568999999999875543322    333221 22357999998654

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=87.42  E-value=2.4  Score=27.10  Aligned_cols=62  Identities=16%  Similarity=0.176  Sum_probs=39.3

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCccc-------CCHHHHh-----ccCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMA-------LSLSTLA-----SGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~-----~~adiVi~~vp~~~~~~~v   63 (183)
                      |....+.++..|. .|++.++++++.+.+.+.|....       ++..+.+     ...|+||.++..+...+..
T Consensus        41 G~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~  115 (176)
T d2fzwa2          41 GLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAA  115 (176)
T ss_dssp             HHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHH
T ss_pred             HHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHH
Confidence            3444455556676 57777899999988888874322       1222222     3589999999775554444

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.23  E-value=0.69  Score=29.97  Aligned_cols=76  Identities=17%  Similarity=0.219  Sum_probs=45.6

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-----cCCHHHHh------ccCCEEEEecCChHHHHHHhcCCccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-----ALSLSTLA------SGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~------~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      |....+.+...|.+|++.++++++.+.+.+.|...     ..+..+.+      +..|+|+-++. +..++..       
T Consensus        42 G~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g-~~~~~~~-------  113 (174)
T d1yb5a2          42 GLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA-NVNLSKD-------  113 (174)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCH-HHHHHHH-------
T ss_pred             cccccccccccCcccccccccccccccccccCcccccccccccHHHHhhhhhccCCceEEeeccc-HHHHHHH-------
Confidence            44445555677999999998998888888877532     12233322      23688887774 3333333       


Q ss_pred             cccCCCCcEEEeccC
Q psy755           71 LKHAKPGVIVIDSST   85 (183)
Q Consensus        71 ~~~l~~~~iiid~s~   85 (183)
                      .+.++++..++..+.
T Consensus       114 ~~~l~~~G~iv~~G~  128 (174)
T d1yb5a2         114 LSLLSHGGRVIVVGS  128 (174)
T ss_dssp             HHHEEEEEEEEECCC
T ss_pred             HhccCCCCEEEEEec
Confidence            345556555665543

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.58  E-value=1.1  Score=30.74  Aligned_cols=91  Identities=10%  Similarity=0.007  Sum_probs=53.7

Q ss_pred             cEEEEcCCchhHHHHHHc----C-Cc----ccCC---HHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEe
Q psy755           15 DVIVYDKNTDASQTLAKE----G-AN----MALS---LSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVID   82 (183)
Q Consensus        15 ~V~~~~~~~~~~~~~~~~----g-~~----~~~~---~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid   82 (183)
                      .|++.|.++..++.+.+.    + ..    ....   ........|+|+.-++.+.+...++   +.+...|++|..++-
T Consensus       100 ~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~d~~~~~~~~~~l---~~~~~~LkpgG~lvi  176 (227)
T d1g8aa_         100 KIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVAQPTQAKILI---DNAEVYLKRGGYGMI  176 (227)
T ss_dssp             EEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCCSTTHHHHHH---HHHHHHEEEEEEEEE
T ss_pred             EEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEEEccccchHHHHH---HHHHHhcccCCeEEE
Confidence            799999999988776543    1 10    0111   1223456788998888776666666   777778888765442


Q ss_pred             c-------cCCCchhHHHHHHHHHhcCCcEEee
Q psy755           83 S-------STVDPQVPQTLSNLAREKQITFLDA  108 (183)
Q Consensus        83 ~-------s~~~~~~~~~~~~~~~~~g~~~~~~  108 (183)
                      +       ++..+.......+.+.+.++..++.
T Consensus       177 ~~ka~~~~~~~~~~~v~~~v~~l~~~gf~iie~  209 (227)
T d1g8aa_         177 AVKSRSIDVTKEPEQVFREVERELSEYFEVIER  209 (227)
T ss_dssp             EEEGGGTCTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred             EEECCccCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence            1       1123333333333444557777663

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=86.04  E-value=0.76  Score=29.37  Aligned_cols=54  Identities=9%  Similarity=0.082  Sum_probs=33.3

Q ss_pred             CcHHHHHHHHhCCC-------cEEEE--cCCchhHHHHHHc----------CCcccCCHHHHhccCCEEEEec
Q psy755            1 MGSHMARNLLKNGH-------DVIVY--DKNTDASQTLAKE----------GANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         1 mG~~iA~~l~~~g~-------~V~~~--~~~~~~~~~~~~~----------g~~~~~~~~~~~~~adiVi~~v   54 (183)
                      +|.+++..|+..+.       ...++  +++.++.+...-.          +....++..+.++++|+|+++-
T Consensus        16 VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~advViita   88 (154)
T d1y7ta1          16 IGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYALLVG   88 (154)
T ss_dssp             HHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEEEECC
T ss_pred             HHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccEEEeec
Confidence            37788888887653       12333  3334443332211          2345567888899999999987

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=85.82  E-value=0.45  Score=34.44  Aligned_cols=56  Identities=18%  Similarity=0.175  Sum_probs=38.9

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchhHH--HHHHc-CCc-----ccCC---HHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDASQ--TLAKE-GAN-----MALS---LSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~~~--~~~~~-g~~-----~~~~---~~~~~~~adiVi~~vp~   56 (183)
                      +|+.+++.|.+.||+|++..|++++..  .+... ++.     ..+.   ...+...+|.++...+.
T Consensus        15 iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_          15 QGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             HHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             HHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            489999999999999999999877543  22222 321     1221   33467789999988764

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.59  E-value=0.88  Score=29.54  Aligned_cols=75  Identities=12%  Similarity=0.204  Sum_probs=45.4

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-----cCCHHHHh------ccCCEEEEecCChHHHHHHhcCCccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-----ALSLSTLA------SGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~------~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      |....+.+...|.+|++.++++++.+.+.+.|...     ..+..+.+      ...|+||-++.. ..++..+      
T Consensus        39 G~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~------  111 (183)
T d1pqwa_          39 GMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAG-EAIQRGV------  111 (183)
T ss_dssp             HHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCT-HHHHHHH------
T ss_pred             ccccchhhccccccceeeecccccccccccccccccccCCccCHHHHHHHHhCCCCEEEEEecccc-hHHHHHH------
Confidence            44555555667899999888888888777766321     12333322      247888888864 4444443      


Q ss_pred             cccCCCCcEEEecc
Q psy755           71 LKHAKPGVIVIDSS   84 (183)
Q Consensus        71 ~~~l~~~~iiid~s   84 (183)
                       ..++++..++.++
T Consensus       112 -~~l~~~G~~v~~G  124 (183)
T d1pqwa_         112 -QILAPGGRFIELG  124 (183)
T ss_dssp             -HTEEEEEEEEECS
T ss_pred             -HHhcCCCEEEEEc
Confidence             3445555566554

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=84.99  E-value=1.8  Score=28.37  Aligned_cols=62  Identities=13%  Similarity=0.126  Sum_probs=33.6

Q ss_pred             cHHHHHHHHhCCC-cEEEE-cCCc-h-hHHHHHHc----CC-cccCCHHHHhccCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGH-DVIVY-DKNT-D-ASQTLAKE----GA-NMALSLSTLASGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~-~~~~-~-~~~~~~~~----g~-~~~~~~~~~~~~adiVi~~vp~~~~~~~v   63 (183)
                      |.-+.+.|.++-+ ++... .++. . .+......    .. .......+...++|+||.++|.....+-+
T Consensus        18 G~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~~s~~~~   88 (183)
T d2cvoa1          18 GAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHGTTQEII   88 (183)
T ss_dssp             HHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSSHHHHHH
T ss_pred             HHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccchHHHHH
Confidence            6778888887743 65544 2222 2 12222111    11 11222334467899999999987654333

>d1js1x2 c.78.1.1 (X:164-324) Transcarbamylase-like protein {Bacteroides fragilis [TaxId: 817]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Transcarbamylase-like protein
species: Bacteroides fragilis [TaxId: 817]

Probab=84.74  E-value=0.85  Score=29.52  Aligned_cols=52  Identities=12%  Similarity=0.085  Sum_probs=37.5

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEec
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~v   54 (183)
                      .+++..+.+.|+++.+.....-..+.-...+.....++.++++++|+|..-+
T Consensus        23 ~S~i~~l~~~G~~v~~~~P~~~~p~~~~~~~~~~~~d~~eav~~aDvI~td~   74 (161)
T d1js1x2          23 NSFAEWMNATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKN   74 (161)
T ss_dssp             HHHHHHHHTSSSEEEEECCTTCCCCHHHHTTCEEESCHHHHHTTCSEEEECC
T ss_pred             HHHHHHHHHcCCEEEEECCcccCCCHHHhCCceEecCHHHHhCCCcceeeeh
Confidence            5677888899999998865432222222346677889999999999998643

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.69  E-value=0.66  Score=28.84  Aligned_cols=73  Identities=14%  Similarity=0.186  Sum_probs=45.8

Q ss_pred             CcHHHHHHHHhCCCcEEE-EcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCCCcE
Q psy755            1 MGSHMARNLLKNGHDVIV-YDKNTDASQTLAKEGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKPGVI   79 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~i   79 (183)
                      ||+.++..+.+.|+++.. +|++..                 +.+..+|+||==..+ ..+...+   +   ..+..+..
T Consensus        12 MG~~i~~~~~~~~~~l~~~id~~~~-----------------~~~~~~DVvIDFS~p-~~~~~~l---~---~~~~~~~p   67 (128)
T d1vm6a3          12 MGQEIQKVFSEKGHELVLKVDVNGV-----------------EELDSPDVVIDFSSP-EALPKTV---D---LCKKYRAG   67 (128)
T ss_dssp             HHHHHHHHHHHTTCEEEEEEETTEE-----------------EECSCCSEEEECSCG-GGHHHHH---H---HHHHHTCE
T ss_pred             HHHHHHHHHhcCCCeEEEEECCCcH-----------------HHhccCCEEEEecCH-HHHHHHH---H---HHHhcCCC
Confidence            899999999999998775 354332                 224568988877644 4454443   2   23445667


Q ss_pred             EEeccCCCchhHHHHHHH
Q psy755           80 VIDSSTVDPQVPQTLSNL   97 (183)
Q Consensus        80 iid~s~~~~~~~~~~~~~   97 (183)
                      +|-.||..........+.
T Consensus        68 ~ViGTTG~~~~~~~~i~~   85 (128)
T d1vm6a3          68 LVLGTTALKEEHLQMLRE   85 (128)
T ss_dssp             EEECCCSCCHHHHHHHHH
T ss_pred             EEEEcCCCCHHHHHHHHH
Confidence            777777765554343333

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=84.66  E-value=0.45  Score=32.67  Aligned_cols=77  Identities=17%  Similarity=0.285  Sum_probs=50.3

Q ss_pred             HHHHHHhCCCcEEEEcCCchhHHHHHH----cC--Ccc-cCCHHHH--hccCCEEEEe------cCChHHHHHHhcCCcc
Q psy755            5 MARNLLKNGHDVIVYDKNTDASQTLAK----EG--ANM-ALSLSTL--ASGAEFIISM------LPASQDVLDAYDGSDG   69 (183)
Q Consensus         5 iA~~l~~~g~~V~~~~~~~~~~~~~~~----~g--~~~-~~~~~~~--~~~adiVi~~------vp~~~~~~~v~~~~~~   69 (183)
                      ++..|++.|.+|++.|.|++-++.+.+    .+  +.. ..+..+.  -+..|+|++.      ++.+.....++   +.
T Consensus        51 ~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~~~l---~~  127 (246)
T d1y8ca_          51 LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYIIDSDDLKKYF---KA  127 (246)
T ss_dssp             THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGGCCSHHHHHHHH---HH
T ss_pred             HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcccccccccceeeeeeeccCCHHHHHHHH---HH
Confidence            566788999999999999987766544    23  221 2334332  2346988863      34555666666   78


Q ss_pred             ccccCCCCc-EEEecc
Q psy755           70 ILKHAKPGV-IVIDSS   84 (183)
Q Consensus        70 l~~~l~~~~-iiid~s   84 (183)
                      +...|++|. .|+|..
T Consensus       128 ~~~~LkpgG~~i~~~~  143 (246)
T d1y8ca_         128 VSNHLKEGGVFIFDIN  143 (246)
T ss_dssp             HHTTEEEEEEEEEEEE
T ss_pred             HHHhCCCCeEEEEEeC
Confidence            888888865 455654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=84.64  E-value=0.8  Score=31.94  Aligned_cols=56  Identities=20%  Similarity=0.279  Sum_probs=37.6

Q ss_pred             CcHHHHHHHHhCCCcEEEEcCCchh-----HHH---HHHcCCcc-------cCCHHHHhccCCEEEEecCC
Q psy755            1 MGSHMARNLLKNGHDVIVYDKNTDA-----SQT---LAKEGANM-------ALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         1 mG~~iA~~l~~~g~~V~~~~~~~~~-----~~~---~~~~g~~~-------~~~~~~~~~~adiVi~~vp~   56 (183)
                      +|+.++..|.+.||+|++.+|++..     .+.   +...++..       .++..+...+++.++.+.+.
T Consensus        15 iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~~~~   85 (312)
T d1qyda_          15 IGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISALAG   85 (312)
T ss_dssp             THHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECCCC
T ss_pred             HHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhhhhh
Confidence            5899999999999999999987642     222   22223321       12234566789999988754

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=84.34  E-value=1.5  Score=28.18  Aligned_cols=61  Identities=13%  Similarity=0.016  Sum_probs=38.5

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCcc-----cCCHHHHh------ccCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGANM-----ALSLSTLA------SGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~------~~adiVi~~vp~~~~~~~v   63 (183)
                      |....+.....|.+|++.++++++.+.+.+.|...     ..+..+.+      ...|+|+-++.. +.....
T Consensus        42 G~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~-~~~~~~  113 (179)
T d1qora2          42 GLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGR-DTWERS  113 (179)
T ss_dssp             HHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCG-GGHHHH
T ss_pred             chHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCccH-HHHHHH
Confidence            34444445567899999999999999888877431     12333322      236788887753 444444

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.09  E-value=0.095  Score=33.97  Aligned_cols=80  Identities=18%  Similarity=0.197  Sum_probs=45.0

Q ss_pred             cHHHHHHHHhCCC---cEEEEcCCchhHHHHHH--cCCcccCCHHHHhccCCEEEEecCChHHHHHHhcCCccccccCCC
Q psy755            2 GSHMARNLLKNGH---DVIVYDKNTDASQTLAK--EGANMALSLSTLASGAEFIISMLPASQDVLDAYDGSDGILKHAKP   76 (183)
Q Consensus         2 G~~iA~~l~~~g~---~V~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~   76 (183)
                      |..+.+.|.++.+   ++.....+...-+....  .........++...+.|+++++.|.....+.+       .....+
T Consensus        14 G~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~~~s~~~~-------~~~~~~   86 (154)
T d2gz1a1          14 GAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKYA-------PYAVKA   86 (154)
T ss_dssp             HHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHHHHHHHH-------HHHHHT
T ss_pred             HHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhhhhhhhhhhhccCccchhhHH-------hhhccc
Confidence            6778888888865   33333322111111000  01112223334456899999999875544333       234568


Q ss_pred             CcEEEeccCCCc
Q psy755           77 GVIVIDSSTVDP   88 (183)
Q Consensus        77 ~~iiid~s~~~~   88 (183)
                      |..|||.|+...
T Consensus        87 ~~~VIDlSsdfR   98 (154)
T d2gz1a1          87 GVVVVDNTSYFR   98 (154)
T ss_dssp             TCEEEECSSTTT
T ss_pred             cceehhcChhhh
Confidence            999999998654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=83.67  E-value=0.57  Score=30.50  Aligned_cols=73  Identities=19%  Similarity=0.149  Sum_probs=45.2

Q ss_pred             HHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHh---------ccCCEEEEecCChHHHHHHhcCCccccccCC
Q psy755            5 MARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLA---------SGAEFIISMLPASQDVLDAYDGSDGILKHAK   75 (183)
Q Consensus         5 iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~   75 (183)
                      ..+.....|.+|+...+++++.+.+.+.|....-+..+..         +..|+||-++-. ..+...+       +.+.
T Consensus        40 avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vgg-~~~~~~~-------~~l~  111 (167)
T d1tt7a2          40 AVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG-KQLASLL-------SKIQ  111 (167)
T ss_dssp             HHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT-HHHHHHH-------TTEE
T ss_pred             HHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchhchhhhcccCCCceEEEecCcH-HHHHHHH-------HHhc
Confidence            3333445689999999999999999888764433333221         247888888854 4444443       4455


Q ss_pred             CCcEEEeccC
Q psy755           76 PGVIVIDSST   85 (183)
Q Consensus        76 ~~~iiid~s~   85 (183)
                      ++..++.++.
T Consensus       112 ~~G~iv~~G~  121 (167)
T d1tt7a2         112 YGGSVAVSGL  121 (167)
T ss_dssp             EEEEEEECCC
T ss_pred             cCceEEEeec
Confidence            5555554443

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.29  E-value=0.92  Score=29.68  Aligned_cols=82  Identities=11%  Similarity=0.135  Sum_probs=47.2

Q ss_pred             cHHHHHHHHhC-CCcEE-EEcCCc--hhHHHHHH---c--CC-----cccCCHHHHhccCCEEEEecCChHHHHHHhcCC
Q psy755            2 GSHMARNLLKN-GHDVI-VYDKNT--DASQTLAK---E--GA-----NMALSLSTLASGAEFIISMLPASQDVLDAYDGS   67 (183)
Q Consensus         2 G~~iA~~l~~~-g~~V~-~~~~~~--~~~~~~~~---~--g~-----~~~~~~~~~~~~adiVi~~vp~~~~~~~v~~~~   67 (183)
                      |..+.+.|..+ .+++. ++.++.  ..-+....   .  +.     ....+......++|++|.|+|.....+.+    
T Consensus        14 G~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~alp~~~s~~~~----   89 (179)
T d2g17a1          14 GAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLATAHEVSHDLA----   89 (179)
T ss_dssp             HHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECSCHHHHHHHH----
T ss_pred             HHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeeccccchhHHHHh----
Confidence            67788888887 44654 333321  11112211   1  11     11223344457899999999886544333    


Q ss_pred             ccccccCCCCcEEEeccCCCchh
Q psy755           68 DGILKHAKPGVIVIDSSTVDPQV   90 (183)
Q Consensus        68 ~~l~~~l~~~~iiid~s~~~~~~   90 (183)
                         ......+..++|.|+.....
T Consensus        90 ---~~~~~~~~~vIDlSadfRl~  109 (179)
T d2g17a1          90 ---PQFLQAGCVVFDLSGAFRVN  109 (179)
T ss_dssp             ---HHHHHTTCEEEECSSTTSSS
T ss_pred             ---hhhhhcCceeeccccccccc
Confidence               23455889999999876544

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=82.94  E-value=2.7  Score=27.16  Aligned_cols=75  Identities=12%  Similarity=0.060  Sum_probs=48.2

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCchhHHHHHHcCCc----c-cCCH-HHHh-----ccCCEEEEecCChHHHHHHhcCCccc
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTDASQTLAKEGAN----M-ALSL-STLA-----SGAEFIISMLPASQDVLDAYDGSDGI   70 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~----~-~~~~-~~~~-----~~adiVi~~vp~~~~~~~v~~~~~~l   70 (183)
                      |....+..+..|.+|+..++++++.+.+.+.|..    . .++. +...     ...|+||-++. .+..+..       
T Consensus        43 G~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG-~~~~~~~-------  114 (182)
T d1v3va2          43 GSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG-GEFLNTV-------  114 (182)
T ss_dssp             HHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC-HHHHHHH-------
T ss_pred             hHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC-chhhhhh-------
Confidence            4445555567799999999999999988888742    1 1122 2222     35899999995 4544444       


Q ss_pred             cccCCCCcEEEecc
Q psy755           71 LKHAKPGVIVIDSS   84 (183)
Q Consensus        71 ~~~l~~~~iiid~s   84 (183)
                      .+.++++-.++.++
T Consensus       115 ~~~l~~~G~~v~~G  128 (182)
T d1v3va2         115 LSQMKDFGKIAICG  128 (182)
T ss_dssp             GGGEEEEEEEEECC
T ss_pred             hhhccCCCeEEeec
Confidence            35566666666554

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=82.41  E-value=2.2  Score=27.02  Aligned_cols=55  Identities=4%  Similarity=-0.084  Sum_probs=34.9

Q ss_pred             cHHHHHHHHhCCC-------cEEEEcCCchh--HHHHHH---c-------CCcccCCHHHHhccCCEEEEecCC
Q psy755            2 GSHMARNLLKNGH-------DVIVYDKNTDA--SQTLAK---E-------GANMALSLSTLASGAEFIISMLPA   56 (183)
Q Consensus         2 G~~iA~~l~~~g~-------~V~~~~~~~~~--~~~~~~---~-------g~~~~~~~~~~~~~adiVi~~vp~   56 (183)
                      |.++|..|+..+.       +++++|.+...  .+.+.-   .       .....++..+.++++|+|+++-..
T Consensus        16 G~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvVVitag~   89 (154)
T d5mdha1          16 AYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDVAILVGSM   89 (154)
T ss_dssp             HHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSEEEECCSC
T ss_pred             HHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCceEEEEeccc
Confidence            5667777765432       57778766543  333221   1       234456788899999999999844

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=82.37  E-value=3.4  Score=26.33  Aligned_cols=62  Identities=19%  Similarity=0.187  Sum_probs=39.3

Q ss_pred             cHHHHHHHHhCCC-cEEEEcCCchhHHHHHHcCCccc----C--C-HHHHh-----ccCCEEEEecCChHHHHHH
Q psy755            2 GSHMARNLLKNGH-DVIVYDKNTDASQTLAKEGANMA----L--S-LSTLA-----SGAEFIISMLPASQDVLDA   63 (183)
Q Consensus         2 G~~iA~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~----~--~-~~~~~-----~~adiVi~~vp~~~~~~~v   63 (183)
                      |...+..++..|- +|++.|+++++.+.+.+.|....    +  + ..+..     ...|+||.++.........
T Consensus        41 g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a  115 (175)
T d1cdoa2          41 GLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNA  115 (175)
T ss_dssp             HHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHH
T ss_pred             cchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecCCHHHHHHH
Confidence            3344445555554 78889999999999999885321    1  1 12222     2589999999765544443

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=81.93  E-value=2.1  Score=26.20  Aligned_cols=70  Identities=10%  Similarity=0.063  Sum_probs=48.6

Q ss_pred             CCcccCCHHHHhc--cCCEEEEecCChHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEe
Q psy755           33 GANMALSLSTLAS--GAEFIISMLPASQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLD  107 (183)
Q Consensus        33 g~~~~~~~~~~~~--~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~  107 (183)
                      ++...++..|+.+  ++|.-++-||++...+.++   +.+...+  ..+++-+-.....+...+.+.++..+..++.
T Consensus        49 giPVf~tV~eAv~~~~~d~SvIfVPp~~a~dAi~---EAi~agI--~liv~ITEgVPv~Dm~~i~~~~~~~~~~liG  120 (121)
T d1oi7a1          49 GVPVYDTVKEAVAHHEVDASIIFVPAPAAADAAL---EAAHAGI--PLIVLITEGIPTLDMVRAVEEIKALGSRLIG  120 (121)
T ss_dssp             TEEEESSHHHHHHHSCCSEEEECCCHHHHHHHHH---HHHHTTC--SEEEECCSCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred             CCchHhhHHHHHHhcCCeEEEEeeCHHHHHHHHH---HHHhCCC--cEEEEecCCCCHHHHHHHHHHHHhCCCEEeC
Confidence            5677888888764  7999999999988777776   5554432  2344444455666777888888777766654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=81.61  E-value=0.46  Score=32.52  Aligned_cols=23  Identities=35%  Similarity=0.449  Sum_probs=20.4

Q ss_pred             cHHHHHHHHhCCCcEEEEcCCch
Q psy755            2 GSHMARNLLKNGHDVIVYDKNTD   24 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~~~~~   24 (183)
                      |.+.|..|+++|++|++++++++
T Consensus        16 Gl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1          16 GLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             HHHHHHHHHHTTCEEEEECSSSS
T ss_pred             HHHHHHHHHHCCCCEEEEeCCCC
Confidence            67889999999999999998754

>d2ftsa3 c.57.1.2 (A:499-653) Gephyrin, domain 5 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: Molybdenum cofactor biosynthesis proteins
superfamily: Molybdenum cofactor biosynthesis proteins
family: MoeA central domain-like
domain: Gephyrin, domain 5
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=81.57  E-value=0.78  Score=29.39  Aligned_cols=43  Identities=21%  Similarity=0.169  Sum_probs=20.0

Q ss_pred             HHHHHHhCCCcEEEEcCCchhHHHHHHcCCcccCCHHHHhccCCEEEEec
Q psy755            5 MARNLLKNGHDVIVYDKNTDASQTLAKEGANMALSLSTLASGAEFIISML   54 (183)
Q Consensus         5 iA~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~adiVi~~v   54 (183)
                      |+..|.+.|++|.-+..-++..+.+.       ..+.++++++|+||++-
T Consensus        32 l~~~l~~~G~~v~~~~~v~Dd~~~i~-------~~l~~~~~~~DliittG   74 (155)
T d2ftsa3          32 LLATIQEHGYPTINLGIVGDNPDDLL-------NALNEGISRADVIITSG   74 (155)
T ss_dssp             HHHHHHTTTCCEEEEEEECSSHHHHH-------HHHHHHHHHCSEEEEES
T ss_pred             HHHHhcccccceEEEEEecCchhHHH-------HHHHHhhcccCEEEEec
Confidence            44555555665554443333333322       13344445566666543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.02  E-value=0.92  Score=29.73  Aligned_cols=72  Identities=14%  Similarity=0.041  Sum_probs=43.8

Q ss_pred             HHHHhCCCcEEEEcCCchhHHHHHHcCCccc----CCHHHHh-----ccCCEEEEecCChHHHHHHhcCCccccccCCCC
Q psy755            7 RNLLKNGHDVIVYDKNTDASQTLAKEGANMA----LSLSTLA-----SGAEFIISMLPASQDVLDAYDGSDGILKHAKPG   77 (183)
Q Consensus         7 ~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~----~~~~~~~-----~~adiVi~~vp~~~~~~~v~~~~~~l~~~l~~~   77 (183)
                      +.....|.+|+...+++++.+.+.+.|....    +...+..     +..|+||-++.. ..+...+       ..++++
T Consensus        50 Qlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg-~~~~~~l-------~~l~~~  121 (176)
T d1xa0a2          50 SMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG-RTLATVL-------SRMRYG  121 (176)
T ss_dssp             HHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT-TTHHHHH-------HTEEEE
T ss_pred             HHHHHcCCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCCc-hhHHHHH-------HHhCCC
Confidence            3344779999999999999999888774321    1122221     257888888865 3344433       455666


Q ss_pred             cEEEeccCC
Q psy755           78 VIVIDSSTV   86 (183)
Q Consensus        78 ~iiid~s~~   86 (183)
                      ..++.++..
T Consensus       122 Griv~~G~~  130 (176)
T d1xa0a2         122 GAVAVSGLT  130 (176)
T ss_dssp             EEEEECSCC
T ss_pred             ceEEEeecc
Confidence            666666654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=80.96  E-value=1.3  Score=24.83  Aligned_cols=31  Identities=23%  Similarity=0.202  Sum_probs=23.0

Q ss_pred             HHHHHHHHhCCCcEEEEcCCchhHHHHHHcC
Q psy755            3 SHMARNLLKNGHDVIVYDKNTDASQTLAKEG   33 (183)
Q Consensus         3 ~~iA~~l~~~g~~V~~~~~~~~~~~~~~~~g   33 (183)
                      ....+.+...|++|+...+++++.+.+.+.|
T Consensus        46 ~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lG   76 (77)
T d1o8ca2          46 STAVALLHKLGYQVVAVSGRESTHEYLKSLG   76 (77)
T ss_dssp             HHHHHHHHHTTCCEEEEESCGGGHHHHHHHT
T ss_pred             HHHHHHHHHcCCeEEEEECCHHHHHHHHHCC
Confidence            3344445677999999999999888877654

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=80.76  E-value=1.4  Score=31.76  Aligned_cols=82  Identities=17%  Similarity=0.164  Sum_probs=49.4

Q ss_pred             HHHHHhCCCcEEEEcCCchhHHHHHHc----CCc----ccCCHHHHh-------ccCCEEEEecCCh-----------HH
Q psy755            6 ARNLLKNGHDVIVYDKNTDASQTLAKE----GAN----MALSLSTLA-------SGAEFIISMLPAS-----------QD   59 (183)
Q Consensus         6 A~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~----~~~~~~~~~-------~~adiVi~~vp~~-----------~~   59 (183)
                      +..+++.+.+|+..|.|+..++.+.+.    |..    ...+..++.       ...|+|++--|..           ..
T Consensus       160 s~~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~DpP~~~~~~~~~~~~~~~  239 (318)
T d1wxxa2         160 ALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRA  239 (318)
T ss_dssp             HHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHH
T ss_pred             HHHHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEEcCCccccchHHHHHHHHH
Confidence            344566677999999999988776643    432    223443332       2579999876631           11


Q ss_pred             HHHHhcCCccccccCCCCcEEEeccCCCchh
Q psy755           60 VLDAYDGSDGILKHAKPGVIVIDSSTVDPQV   90 (183)
Q Consensus        60 ~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~   90 (183)
                      ...++   ......+++|.+++-+|.+...+
T Consensus       240 ~~~l~---~~a~~lLkpGG~Lv~~scs~~~~  267 (318)
T d1wxxa2         240 YKEVN---LRAIKLLKEGGILATASCSHHMT  267 (318)
T ss_dssp             HHHHH---HHHHHTEEEEEEEEEEECCTTSC
T ss_pred             HHHHH---HHHHHHcCCCCEEEEEeCCcccC
Confidence            12333   44556788888777666554333

>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal sequence recognition protein Ffh
species: Thermus aquaticus [TaxId: 271]

Probab=80.75  E-value=5.9  Score=26.36  Aligned_cols=24  Identities=13%  Similarity=0.181  Sum_probs=18.0

Q ss_pred             HHHHHHhCCCcEEEEcCCchhHHH
Q psy755            5 MARNLLKNGHDVIVYDKNTDASQT   28 (183)
Q Consensus         5 iA~~l~~~g~~V~~~~~~~~~~~~   28 (183)
                      ||..+.+.|.+|.+.+-+..+...
T Consensus        30 LA~~~~~~g~kV~lit~Dt~R~gA   53 (207)
T d1ls1a2          30 LALYYKGKGRRPLLVAADTQRPAA   53 (207)
T ss_dssp             HHHHHHHTTCCEEEEECCSSCHHH
T ss_pred             HHHHHHHCCCcEEEEecccccchH
Confidence            677788889999988777665433

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=80.67  E-value=2.8  Score=28.81  Aligned_cols=99  Identities=13%  Similarity=0.167  Sum_probs=58.3

Q ss_pred             cHHHHHHHHhCCCcEEEEc-CC----------chhHHH------------HHHc-CCcccCCHHHHh-ccCCEEEEecCC
Q psy755            2 GSHMARNLLKNGHDVIVYD-KN----------TDASQT------------LAKE-GANMALSLSTLA-SGAEFIISMLPA   56 (183)
Q Consensus         2 G~~iA~~l~~~g~~V~~~~-~~----------~~~~~~------------~~~~-g~~~~~~~~~~~-~~adiVi~~vp~   56 (183)
                      |..+|+.|.+.|.+|+..+ .+          .+.+.+            +... +.....+..++. ..||+++-|-..
T Consensus        43 G~~~a~~L~~~Gakvv~vsD~~g~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~DIliPcA~~  122 (242)
T d1v9la1          43 GRWTAYWLEKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDNAEFVKNPDAIFKLDVDIFVPAAIE  122 (242)
T ss_dssp             HHHHHHHHHTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSCCCCCSSTTGGGGCCCSEEEECSCS
T ss_pred             HHHHHHHHHHcCCeEEEeecccccccccccccHHHHHHHhhcchhhHHHhhhhccCceEeeCcchhccccccEEeecchh
Confidence            7889999999999987653 32          111111            1111 333333344433 489999999865


Q ss_pred             hHHHHHHhcCCccccccCCCCcEEEeccCCCchhHHHHHHHHHhcCCcEEeecc
Q psy755           57 SQDVLDAYDGSDGILKHAKPGVIVIDSSTVDPQVPQTLSNLAREKQITFLDAPV  110 (183)
Q Consensus        57 ~~~~~~v~~~~~~l~~~l~~~~iiid~s~~~~~~~~~~~~~~~~~g~~~~~~~~  110 (183)
                      +.     +.  ++..+.+ +-++|+...+.. .+..+ .+.+.++|+.+++..+
T Consensus       123 ~~-----I~--~~~a~~i-~ak~IvegAN~p-~t~~a-~~~L~~rgI~~~PD~~  166 (242)
T d1v9la1         123 NV-----IR--GDNAGLV-KARLVVEGANGP-TTPEA-ERILYERGVVVVPDIL  166 (242)
T ss_dssp             SC-----BC--TTTTTTC-CCSEEECCSSSC-BCHHH-HHHHHTTTCEEECHHH
T ss_pred             cc-----cc--HHHHHhc-ccCEEEecCCCC-CChhH-HHHHHhCCeEEeCchh
Confidence            43     21  2333444 446777666554 44444 5788899999888443