Psyllid ID: psy7590
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 358 | 2.2.26 [Sep-21-2011] | |||||||
| Q8K3X2 | 321 | GDP-L-fucose synthase OS= | yes | N/A | 0.868 | 0.968 | 0.586 | 1e-117 | |
| P23591 | 321 | GDP-L-fucose synthase OS= | yes | N/A | 0.868 | 0.968 | 0.584 | 1e-116 | |
| Q9W1X8 | 321 | Probable GDP-L-fucose syn | yes | N/A | 0.891 | 0.993 | 0.589 | 1e-116 | |
| Q13630 | 321 | GDP-L-fucose synthase OS= | yes | N/A | 0.868 | 0.968 | 0.578 | 1e-116 | |
| Q5RBE5 | 321 | GDP-L-fucose synthase OS= | yes | N/A | 0.868 | 0.968 | 0.578 | 1e-116 | |
| Q55C77 | 320 | GDP-L-fucose synthase OS= | yes | N/A | 0.874 | 0.978 | 0.533 | 1e-107 | |
| Q9LMU0 | 328 | Putative GDP-L-fucose syn | yes | N/A | 0.832 | 0.908 | 0.306 | 9e-40 | |
| O49213 | 323 | GDP-L-fucose synthase 1 O | no | N/A | 0.832 | 0.922 | 0.297 | 4e-39 | |
| P55353 | 314 | Uncharacterized protein y | yes | N/A | 0.773 | 0.882 | 0.317 | 8e-39 | |
| Q67WR2 | 328 | Probable GDP-L-fucose syn | yes | N/A | 0.837 | 0.914 | 0.298 | 7e-38 |
| >sp|Q8K3X2|FCL_CRIGR GDP-L-fucose synthase OS=Cricetulus griseus GN=TSTA3 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/351 (58%), Positives = 250/351 (71%), Gaps = 40/351 (11%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG+AI+K+V + E W+FVSSK+ADL++ TQ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGTRKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
GLI K++ + G V GT
Sbjct: 190 GLIHKVH---------------------------------------LAKSNGSALTVWGT 210
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
GKP RQFIYSLDLARLFIWVLREY+ VEPIILSV E+DEV+I E AEA+ A F G +T
Sbjct: 211 GKPRRQFIYSLDLARLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFCGEVT 270
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FD+ +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF +N+ AR
Sbjct: 271 FDSTKSDGQYKKTASNGKLRAYL-PDFRFTPFKQAVKETCAWFTDNYEQAR 320
|
Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. Cricetulus griseus (taxid: 10029) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 7EC: 1 |
| >sp|P23591|FCL_MOUSE GDP-L-fucose synthase OS=Mus musculus GN=Tsta3 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/351 (58%), Positives = 251/351 (71%), Gaps = 40/351 (11%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG+AI+K+V + E W+FVSSK+ADL++ TQ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGP+DN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPYDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
GLI K++ + K D ++ V GT
Sbjct: 190 GLIHKVH--LAKSSDSAL-------------------------------------TVWGT 210
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
GKP RQFIYSLDLARLFIWVLREY VEPIILSV E+DEV+I E AEA+ A F G +T
Sbjct: 211 GKPRRQFIYSLDLARLFIWVLREYSEVEPIILSVGEEDEVSIKEAAEAVVEAMDFNGEVT 270
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FD+ +DGQ KKTASN KLR P F FTPF+QAV+E+ WF +N+ AR
Sbjct: 271 FDSTKSDGQYKKTASNGKLRSYL-PDFRFTPFKQAVKETCTWFTDNYEQAR 320
|
Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
| >sp|Q9W1X8|FCL_DROME Probable GDP-L-fucose synthase OS=Drosophila melanogaster GN=Gmer PE=2 SV=1 | Back alignment and function description |
|---|
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/353 (58%), Positives = 255/353 (72%), Gaps = 34/353 (9%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
K +LVTGGTGLVGKA+E ++KE+ +DE W F SK+ADL+NL +TQ LF++ KPTHVI
Sbjct: 2 KKVLVTGGTGLVGKALEAVIKEQSP-EDEQWFFAGSKDADLTNLAATQALFAREKPTHVI 60
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
HLAAMVGGLFHNM++NLDF R N+ INDNVL T+++QG KVVSCLSTCIFPDKT+YPID
Sbjct: 61 HLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPID 120
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
ETMVHNGPPHPSN+GYS+AKR++DV N AY+ ++G YTSVIPCN+FGPHDNYN E SHV
Sbjct: 121 ETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHV 180
Query: 185 IPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244
IPG+I +++ + + D V E+ DK+ F V
Sbjct: 181 IPGMIYRMHQLVTEKTD--VPEN-------------DKV-----------------FTVF 208
Query: 245 GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR 304
G+G PLRQF+YS DLA L IWVLR Y+SVEPIILS DE EVTI EVA+A+A AF F GR
Sbjct: 209 GSGMPLRQFVYSRDLAELMIWVLRNYESVEPIILSADEVQEVTIFEVAQAVAKAFNFNGR 268
Query: 305 ITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
+ DT+ +DGQ KKTASN KLR P + FT + A+ SV W+ EN+ AR
Sbjct: 269 LVCDTSKSDGQYKKTASNAKLRSFL-PDYAFTDLETAINASVKWYIENYDQAR 320
|
Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. Drosophila melanogaster (taxid: 7227) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
| >sp|Q13630|FCL_HUMAN GDP-L-fucose synthase OS=Homo sapiens GN=TSTA3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/351 (57%), Positives = 249/351 (70%), Gaps = 40/351 (11%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVGKAI+K+V + E W+FVSSK+ADL++ T+ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ +NDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQ+G T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
GLI K++ + G V GT
Sbjct: 190 GLIHKVH---------------------------------------LAKSSGSALTVWGT 210
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
G P RQFIYSLDLA+LFIWVLREY+ VEPIILSV E+DEV+I E AEA+ A F G +T
Sbjct: 211 GNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVT 270
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FDT +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF +N+ AR
Sbjct: 271 FDTTKSDGQFKKTASNSKLRTYL-PDFRFTPFKQAVKETCAWFTDNYEQAR 320
|
Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
| >sp|Q5RBE5|FCL_PONAB GDP-L-fucose synthase OS=Pongo abelii GN=TSTA3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/351 (57%), Positives = 247/351 (70%), Gaps = 40/351 (11%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVGKAI+K+V + E W+FVSSK+ADL++ T+ L K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDAAQTRALLEKVRPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+ KRM+DV N+AY+QQ+G T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYVKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
GLI K++ + G V GT
Sbjct: 190 GLIHKVH---------------------------------------LAKSSGSALTVWGT 210
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
GKP RQFIYSLDLA+LFIWVLREY+ VEPIILSV E DEV+I E AEA+ A F G +T
Sbjct: 211 GKPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEDDEVSIKEAAEAVVEAMDFHGEVT 270
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FDT +DGQ KKTASN KLR P F FTPF+QAV+E+ AWF +N+ AR
Sbjct: 271 FDTTKSDGQFKKTASNSKLRTYL-PDFRFTPFKQAVKETCAWFTDNYEQAR 320
|
Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
| >sp|Q55C77|FCL_DICDI GDP-L-fucose synthase OS=Dictyostelium discoideum GN=ger PE=3 SV=1 | Back alignment and function description |
|---|
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/354 (53%), Positives = 240/354 (67%), Gaps = 41/354 (11%)
Query: 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHV 63
++ +LVTGG+GLVGK IEK VKE +K +D W+F+ S + DL + EST+ F K KPTHV
Sbjct: 7 KRTVLVTGGSGLVGKGIEKYVKETDKSND-VWVFMRSSDCDLKSRESTRSYFEKIKPTHV 65
Query: 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPI 123
IHLAA VGGLF NM + ++FFR N+ INDNVL + V K VSCLSTCIFPDKTTYPI
Sbjct: 66 IHLAARVGGLFSNMKYKVEFFRENIDINDNVLACCKEFNVVKCVSCLSTCIFPDKTTYPI 125
Query: 124 DETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSH 183
DETM+HNGPPHPSN GY++AKRM+DVLN+AY +++G +TSVIP N++GPHDNY+L H
Sbjct: 126 DETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKFTSVIPTNIYGPHDNYHLTDGH 185
Query: 184 VIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKV 243
VIPGLI K Y ++ +D +
Sbjct: 186 VIPGLIHKTYLAMKNNQD---------------------------------------LTI 206
Query: 244 LGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKG 303
+GTGKPLRQFIYS DLA+ F+W L Y+ + P+ILSV E+DE++IA+VA I A +FKG
Sbjct: 207 MGTGKPLRQFIYSYDLAKYFVWTLNNYEEMSPLILSVGEEDEISIADVARLITEAMEFKG 266
Query: 304 RITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
++ FDT+ ADGQ KKTASN KL+ L P FTP QQA++ES WF +N+ AR
Sbjct: 267 KLIFDTSKADGQYKKTASNLKLKSLV-PDLTFTPIQQAIKESCQWFIDNYETAR 319
|
Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
| >sp|Q9LMU0|FCL2_ARATH Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 164 bits (415), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 173/349 (49%), Gaps = 51/349 (14%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
I V G GLVG AI V++ + + + + E DL++ + F+ KP +VI
Sbjct: 22 IFVAGHRGLVGSAI---VRKLQDQGFTNLVLRTHSELDLTSQSDVESFFATEKPVYVILA 78
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AA VGG+ N ++ DF VN++I NV+ ++Y GVKK++ S+CI+P PI E+
Sbjct: 79 AAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYTHGVKKLLFLGSSCIYPKFAPQPIPES 138
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
+ GP P+N Y+ AK + +AY QH S +P N++G +DN++ E+SHV+P
Sbjct: 139 ALLTGPLEPTNEWYAIAKIAGIKMCQAYRLQHQWDAISGMPTNLYGQNDNFHPENSHVLP 198
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
L+R+ + E++A DE V G+
Sbjct: 199 ALMRRFH------------EAKAN--------------------------NADEVVVWGS 220
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
G PLR+F++ DLA ++++ +Y E + +V EVTI E+AE + FKG++
Sbjct: 221 GSPLREFLHVDDLADACVFLMDQYSGFEHV--NVGSGVEVTIKELAELVKEVVGFKGKLV 278
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTP---FQQAVQESVAWFREN 352
+DT DG +K + KL L +TP + + ++ W+ EN
Sbjct: 279 WDTTKPDGTPRKLMDSSKLASLG-----WTPKISLKDGLSQTYEWYLEN 322
|
Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
| >sp|O49213|FCL1_ARATH GDP-L-fucose synthase 1 OS=Arabidopsis thaliana GN=GER1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 171/349 (48%), Gaps = 51/349 (14%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
I V G GLVG AI V++ +++ + + E DL+ + FS+ KP +VI
Sbjct: 19 IFVAGHRGLVGSAI---VRKLQEQGFTNLVLKTHAELDLTRQADVESFFSQEKPVYVILA 75
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AA VGG+ N ++ DF VN++I NV+ ++Y+ GVKK++ S+CI+P PI E+
Sbjct: 76 AAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGSSCIYPKFAPQPIPES 135
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
+ P+N Y+ AK +AY QHG S +P N++GP+DN++ E+SHV+P
Sbjct: 136 ALLTASLEPTNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYGPNDNFHPENSHVLP 195
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
L+R+ ++ G +E V GT
Sbjct: 196 ALMRRFHEAK--------------------------------------VNGAEEVVVWGT 217
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
G PLR+F++ DLA +++L Y +E + ++ EVTI E+AE + F+G++
Sbjct: 218 GSPLREFLHVDDLADACVFLLDRYSGLEHV--NIGSGQEVTIRELAELVKEVVGFEGKLG 275
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTP---FQQAVQESVAWFREN 352
+D DG +K + KL L +TP + + ++ W+ +N
Sbjct: 276 WDCTKPDGTPRKLMDSSKLASLG-----WTPKVSLRDGLSQTYDWYLKN 319
|
Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
| >sp|P55353|Y4AF_RHISN Uncharacterized protein y4aF OS=Rhizobium sp. (strain NGR234) GN=NGR_a00420 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 157/321 (48%), Gaps = 44/321 (13%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
K I V G G+VG AI + + E D I ++ DL+ E ++ K KP VI
Sbjct: 9 KRIWVAGHKGMVGSAIIRSLASE----DCEVIVADRQKLDLTRQEEVEKFLLKEKPHAVI 64
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
AA VGG+ N + DF N+ + NV++ S++ GV+K++ S+CI+P PI
Sbjct: 65 MAAAKVGGILANDTMPADFIYQNLIMEANVIEGSFRSGVEKLLFLGSSCIYPKYAAQPIR 124
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
E + GP P+N Y+ AK L +AY +Q+G + S +P N++GP D ++L SSHV
Sbjct: 125 EEALLTGPLEPTNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLNSSHV 184
Query: 185 IPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244
+P LIRK ++ K KD C + +
Sbjct: 185 VPALIRKAHEA--KIKDLG------------------------------CLS------IW 206
Query: 245 GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR 304
G+G P R F+YS D + +++L+ Y E I ++ E++I E+A + FKG
Sbjct: 207 GSGTPTRDFLYSEDCSDALVFLLKHYSETEHI--NIGSGGEISIIELAHIVCRVVGFKGD 264
Query: 305 ITFDTNAADGQLKKTASNRKL 325
I FDT+ DG +K S+ +L
Sbjct: 265 IVFDTSKPDGTPRKLLSSERL 285
|
Putative nucleotide sugar epimerase/dehydrogenase. Rhizobium sp. (strain NGR234) (taxid: 394) |
| >sp|Q67WR2|FCL1_ORYSJ Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica GN=Os06g0652400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 172/348 (49%), Gaps = 48/348 (13%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+ V G GLVG AI ++ + + E DL+ + F+ P +V+
Sbjct: 21 VFVAGHRGLVGSAI---LRHLVSLGFTNVVVRTHAELDLTRQSDVEAFFAAELPRYVVLA 77
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDE 125
AA VGG+ N + DF N++I NV+D + K G V+K++ S+CI+P PI E
Sbjct: 78 AAKVGGIHANSTFPADFIAANLQIQTNVVDAALKCGSVRKLLFLGSSCIYPKFAPQPIPE 137
Query: 126 TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVI 185
+ +GP P+N Y+ AK + +AY QHG S +P N++GP DN++ E+SHV+
Sbjct: 138 NSLLSGPLEPTNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTNLYGPQDNFHPENSHVL 197
Query: 186 PGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG 245
P LIR+ + E++A + E V G
Sbjct: 198 PALIRRFH------------EAKA--------------------------SNAAEVVVWG 219
Query: 246 TGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI 305
TG PLR+F++ DLA I+++ Y +E + +V EVTI E+AE + F+G++
Sbjct: 220 TGSPLREFLHVDDLADAVIFLMDHYSGLEHV--NVGSGSEVTIKELAELVKEVVGFQGKL 277
Query: 306 TFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAWFREN 352
+D++ DG +K + K++E+ G++ P ++ + E+ W+ EN
Sbjct: 278 VWDSSKPDGTPRKLMDSSKIQEM---GWKPKVPLKEGLVETYKWYVEN 322
|
Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 7 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 358 | ||||||
| 91085271 | 318 | PREDICTED: similar to nad dependent epim | 0.885 | 0.996 | 0.652 | 1e-133 | |
| 242023358 | 316 | GDP-L-fucose synthetase, putative [Pedic | 0.874 | 0.990 | 0.651 | 1e-131 | |
| 332375767 | 318 | unknown [Dendroctonus ponderosae] | 0.885 | 0.996 | 0.627 | 1e-130 | |
| 156541932 | 321 | PREDICTED: probable GDP-L-fucose synthas | 0.893 | 0.996 | 0.638 | 1e-128 | |
| 383858985 | 322 | PREDICTED: probable GDP-L-fucose synthas | 0.891 | 0.990 | 0.620 | 1e-127 | |
| 357621747 | 325 | putative nad dependent epimerase/dehydra | 0.891 | 0.981 | 0.609 | 1e-125 | |
| 380027361 | 322 | PREDICTED: probable GDP-L-fucose synthas | 0.893 | 0.993 | 0.611 | 1e-125 | |
| 242247583 | 321 | GDP-L-fucose synthase-like [Acyrthosipho | 0.879 | 0.981 | 0.605 | 1e-124 | |
| 66547543 | 322 | PREDICTED: probable GDP-L-fucose synthas | 0.893 | 0.993 | 0.611 | 1e-124 | |
| 340723148 | 322 | PREDICTED: probable GDP-L-fucose synthas | 0.893 | 0.993 | 0.606 | 1e-123 |
| >gi|91085271|ref|XP_967089.1| PREDICTED: similar to nad dependent epimerase/dehydratase [Tribolium castaneum] gi|270008444|gb|EFA04892.1| hypothetical protein TcasGA2_TC014956 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/357 (65%), Positives = 273/357 (76%), Gaps = 40/357 (11%)
Query: 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
M+E KIILVTGG+GLVGKAI+ ++ E+EK+ DETWIFV+SK+A+L +LE T++LF K+KP
Sbjct: 1 MSENKIILVTGGSGLVGKAIQTVL-EDEKKSDETWIFVNSKDANLCDLEETKKLFEKHKP 59
Query: 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT 120
THVIHLAAMVGGLFHNM+HNLDF R N+++N NVLD SY GVKKVVSCLSTCIFPDKTT
Sbjct: 60 THVIHLAAMVGGLFHNMNHNLDFLRNNLQMNSNVLDVSYATGVKKVVSCLSTCIFPDKTT 119
Query: 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE 180
PIDETM+HNGPPHPSNFGYS+AKRM+D++NKAY++QHG YTSV+PCNVFGPHDNYNLE
Sbjct: 120 CPIDETMIHNGPPHPSNFGYSYAKRMIDIMNKAYHEQHGCLYTSVVPCNVFGPHDNYNLE 179
Query: 181 SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDE 240
SSHVIPGLIR+L+D E GG
Sbjct: 180 SSHVIPGLIRRLHDVTE--------------------------------------AGGKT 201
Query: 241 FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQ 300
F VLGTGKPLRQFIYSLDLA+LF+WVLREY+ +EPIILSVDE EV+I ++ E +A AF
Sbjct: 202 FTVLGTGKPLRQFIYSLDLAKLFLWVLREYNEIEPIILSVDEAAEVSIRQLTEELAKAFD 261
Query: 301 FKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FKG I FDT ADGQ KKTASN KLR+ P FEFTPF AV+ESV W+R N+ AR
Sbjct: 262 FKGEIVFDTTKADGQYKKTASNAKLRKYL-PDFEFTPFPVAVKESVDWYRANYQNAR 317
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242023358|ref|XP_002432101.1| GDP-L-fucose synthetase, putative [Pediculus humanus corporis] gi|212517475|gb|EEB19363.1| GDP-L-fucose synthetase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/353 (65%), Positives = 272/353 (77%), Gaps = 40/353 (11%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
++I+VTGGTGLVG+AI +I+K E K+++E WIF+SSK+ DLSNLE T+++F KYKPT VI
Sbjct: 3 EVIIVTGGTGLVGQAIAEIIKLE-KKENENWIFLSSKDGDLSNLEETKKIFQKYKPTQVI 61
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
HLAAMVGGLFHNM+HNLDFFR NM+INDNVL TS + VKKVVSCLSTCIFPDKTTYPID
Sbjct: 62 HLAAMVGGLFHNMAHNLDFFRKNMQINDNVLATSLEYKVKKVVSCLSTCIFPDKTTYPID 121
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
ETM+H GPPH SNFGYS+AKRM+D+LNK Y+QQH +TSVIPCNVFGPHDNYNL+SSHV
Sbjct: 122 ETMLHQGPPHSSNFGYSYAKRMVDILNKGYHQQHNANFTSVIPCNVFGPHDNYNLQSSHV 181
Query: 185 IPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244
IPGLIR++Y I+ G++ F V
Sbjct: 182 IPGLIRRMYVAIKSGENT--------------------------------------FSVY 203
Query: 245 GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR 304
GTGKPLRQFIYSLDLA+L IWVLREY+ VEPIILSVDEKDEV+IAE A I+ AF F+G+
Sbjct: 204 GTGKPLRQFIYSLDLAKLMIWVLREYNEVEPIILSVDEKDEVSIAEAATEISRAFNFQGK 263
Query: 305 ITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
ITFDT+AADGQ KKTASN KLR+ P FEFTPF +A++ESV WF+ N+ AR
Sbjct: 264 ITFDTSAADGQFKKTASNAKLRKYL-PHFEFTPFSKAIKESVTWFQNNYERAR 315
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332375767|gb|AEE63024.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/357 (62%), Positives = 272/357 (76%), Gaps = 40/357 (11%)
Query: 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
M++ K+ILVTGG+GLVGKAI+ ++ E + + DE WIFV SK+ADL +L ST+ LF K++P
Sbjct: 1 MSDSKVILVTGGSGLVGKAIQTVL-ESDAKGDEKWIFVGSKDADLCDLNSTKALFEKHQP 59
Query: 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT 120
THVIHLAAMVGGLFHNMSHNLDF N+ +NDNVL S++ GVKKVVSCLSTCIFPDKT
Sbjct: 60 THVIHLAAMVGGLFHNMSHNLDFLMNNIHMNDNVLRLSHETGVKKVVSCLSTCIFPDKTQ 119
Query: 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE 180
YPIDETMVHNGPPHPSNFGYS+AKR++DV+N+AY+ QHG T+TSV+PCNVFGPHDNYN E
Sbjct: 120 YPIDETMVHNGPPHPSNFGYSYAKRLIDVMNQAYHNQHGCTFTSVVPCNVFGPHDNYNPE 179
Query: 181 SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDE 240
SSHVIPGLI+KL D GGD
Sbjct: 180 SSHVIPGLIKKLQDITS--------------------------------------AGGDT 201
Query: 241 FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQ 300
F V+GTG+PLRQFIYSLDLARLFIWVLR Y+ ++PIILSVDE+ EV+I ++AE +A A+
Sbjct: 202 FTVMGTGRPLRQFIYSLDLARLFIWVLRSYNEIDPIILSVDEEAEVSIKQLAEELAKAYD 261
Query: 301 FKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FKG+I FDT+ ADGQ KKTASN+KLR+ P F+FTPF QA++ESV W+R+NH+ AR
Sbjct: 262 FKGKIVFDTSKADGQFKKTASNKKLRKYL-PDFQFTPFPQAIKESVDWYRQNHASAR 317
|
Source: Dendroctonus ponderosae Species: Dendroctonus ponderosae Genus: Dendroctonus Family: Curculionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|156541932|ref|XP_001600760.1| PREDICTED: probable GDP-L-fucose synthase-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/357 (63%), Positives = 275/357 (77%), Gaps = 37/357 (10%)
Query: 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
MA++KIILVTGG+GLVGKAI+ +V + E +E WIFVSSK+ADL + +ST++LF K+KP
Sbjct: 1 MADQKIILVTGGSGLVGKAIQSVV-QTENPSNEKWIFVSSKDADLCDKKSTEKLFEKHKP 59
Query: 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT 120
THVIHLAAMVGGLFHNM+HNLDF R N+ +NDNVL T+++ GV KVVSCLSTCIFPDKTT
Sbjct: 60 THVIHLAAMVGGLFHNMAHNLDFLRNNLHMNDNVLQTAHEYGVVKVVSCLSTCIFPDKTT 119
Query: 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE 180
YPI+ETMVHNGPPHPSN+GYS AKR++DV N+AY+ QHG YTSVIPCNVFGPHDN+N
Sbjct: 120 YPINETMVHNGPPHPSNYGYSFAKRLIDVQNRAYHDQHGRLYTSVIPCNVFGPHDNFNPS 179
Query: 181 SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDE 240
+SHVIPGL+RKLYD I+ G + DK+
Sbjct: 180 ASHVIPGLMRKLYDLIKDGNTE------------------DKV----------------- 204
Query: 241 FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQ 300
F VLGTGKPLRQFIYS+DLA+LFIWVLREY+SV PIILSVDE EVTIA+ AEA+ AF
Sbjct: 205 FTVLGTGKPLRQFIYSIDLAKLFIWVLREYNSVNPIILSVDESQEVTIAQAAEALTKAFD 264
Query: 301 FKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FKG+I FDT+AADGQ KKTASN KLR+ P F FTPF+ A++E+V W+++N+ AR
Sbjct: 265 FKGKIVFDTSAADGQYKKTASNTKLRKFL-PDFRFTPFEDAIKETVEWYKKNYDKAR 320
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383858985|ref|XP_003704979.1| PREDICTED: probable GDP-L-fucose synthase-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/356 (62%), Positives = 277/356 (77%), Gaps = 37/356 (10%)
Query: 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPT 61
A++K++LVTGGTGLVGKAI+ I+++ E ++E WIFV SK+ADL + EST++LF K+KPT
Sbjct: 3 ADKKVVLVTGGTGLVGKAIQNIIEKNE-NENERWIFVGSKDADLCDKESTKKLFEKHKPT 61
Query: 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTY 121
HVIHLAAMVGGLFHNM HNLDF R N+ +NDNVL T+++ V KV+SCLSTCIFPDKTTY
Sbjct: 62 HVIHLAAMVGGLFHNMKHNLDFLRKNIHMNDNVLQTAHENDVVKVISCLSTCIFPDKTTY 121
Query: 122 PIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLES 181
PIDE+MVHNGPPHPSN+GYS+AKR++D+ N+ YY+QHG YTS+IPCNVFGP+DN++ E+
Sbjct: 122 PIDESMVHNGPPHPSNYGYSYAKRLIDIQNRGYYEQHGRLYTSIIPCNVFGPNDNFHPEA 181
Query: 182 SHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEF 241
SHVIPGL+R+LYD I+ G + DK+ F
Sbjct: 182 SHVIPGLMRRLYDLIKDGNTE------------------DKV-----------------F 206
Query: 242 KVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQF 301
+LG+GKPLRQFIYSLDLA+L IWVLREY+SVEPIILSVDE EVTI++VAEAIA AF F
Sbjct: 207 TILGSGKPLRQFIYSLDLAKLIIWVLREYNSVEPIILSVDETQEVTISQVAEAIAKAFNF 266
Query: 302 KGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
KG++ +DT+AADGQ KKTASN KLR+ P F+FTPF QA+QE+V W+ +N+ AR
Sbjct: 267 KGKLVYDTSAADGQYKKTASNAKLRKYL-PDFQFTPFNQAIQETVDWYIKNYDHAR 321
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357621747|gb|EHJ73476.1| putative nad dependent epimerase/dehydratase [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/364 (60%), Positives = 268/364 (73%), Gaps = 45/364 (12%)
Query: 1 MAEEK-IILVTGGTGLVGKAIEKIVKEEEKRD-----DETWIFVSSKEADLSNLESTQQL 54
M+E+K +ILVTGG+GLVG+AI +++EE K D +ETWIF S + DL + T+ L
Sbjct: 1 MSEDKSVILVTGGSGLVGRAIRTVIEEERKLDSKLVRNETWIFCGSNDGDLRDKAQTEAL 60
Query: 55 FSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCI 114
F K++PTHVIHLAAMVGGLFHNM+HNLDFFR NM INDNVL+ SY VKKVVSCLSTCI
Sbjct: 61 FEKHRPTHVIHLAAMVGGLFHNMAHNLDFFRENMSINDNVLNVSYNYKVKKVVSCLSTCI 120
Query: 115 FPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH 174
FPDK TYPIDETM+HNGPPHPSN+GYS+AKRM+D+LN+ Y+ QHG +TSVIPCNVFGPH
Sbjct: 121 FPDKVTYPIDETMIHNGPPHPSNYGYSYAKRMVDILNRGYHSQHGCMFTSVIPCNVFGPH 180
Query: 175 DNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFC 234
DN++LESSHVIP LIR++ DTI+KG+
Sbjct: 181 DNFSLESSHVIPALIRRMDDTIKKGEPT-------------------------------- 208
Query: 235 FTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEA 294
F VLG+GKPLRQFIYSLDLA+LF+WVLR Y+SVEPIILSVDE+DEVTI+ VAEA
Sbjct: 209 ------FTVLGSGKPLRQFIYSLDLAKLFVWVLRNYNSVEPIILSVDEEDEVTISRVAEA 262
Query: 295 IANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHS 354
I A ++G I +DT+ ADGQ KKTASN KLR L F FTPF +A++++V WFR+N
Sbjct: 263 IKEAHGYQGEIVYDTSKADGQHKKTASNMKLRSLYKE-FNFTPFDKAIKDTVVWFRDNRD 321
Query: 355 VARL 358
ARL
Sbjct: 322 RARL 325
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380027361|ref|XP_003697395.1| PREDICTED: probable GDP-L-fucose synthase-like [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/358 (61%), Positives = 274/358 (76%), Gaps = 38/358 (10%)
Query: 1 MAE-EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYK 59
M+E EKIILVTGGTGLVG+AI+ I+ E K ++E WIFV SK+A+L + +ST++LF KY
Sbjct: 1 MSENEKIILVTGGTGLVGRAIQNII-ETNKNENEKWIFVGSKDANLCDKQSTEKLFEKYM 59
Query: 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT 119
PTHVIHLAAMVGGLF+NMSHNLDF R N+ +NDN+L T+++ V KV+SCLSTCIFPDKT
Sbjct: 60 PTHVIHLAAMVGGLFYNMSHNLDFLRNNIHMNDNILQTAHEHDVVKVISCLSTCIFPDKT 119
Query: 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNL 179
TYPIDE+MVHNGPPHPSN+GYS+AKR++D+ N+AYY+Q+G YTS+IPCNVFGP+DN+
Sbjct: 120 TYPIDESMVHNGPPHPSNYGYSYAKRLIDIQNRAYYEQYGRIYTSIIPCNVFGPNDNFQP 179
Query: 180 ESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGD 239
+SHVIPGL+R+LYD I+ G T
Sbjct: 180 SASHVIPGLMRRLYDLIKDGN-----------------------------------TEDK 204
Query: 240 EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299
EF VLG+GKPLRQFIYSLDLA+L IWVLREY+SVEPIILSVDE EVTI++VAE+IA AF
Sbjct: 205 EFIVLGSGKPLRQFIYSLDLAKLIIWVLREYNSVEPIILSVDESQEVTISQVAESIAQAF 264
Query: 300 QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FKG++ +DT+AADGQ KKTA+N KLR+ P F+FTPF QA++++V W+ EN+ AR
Sbjct: 265 NFKGKLIYDTSAADGQYKKTANNAKLRKYL-PDFQFTPFNQAIKDTVDWYIENYDRAR 321
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242247583|ref|NP_001156247.1| GDP-L-fucose synthase-like [Acyrthosiphon pisum] gi|239791242|dbj|BAH72114.1| ACYPI007507 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/355 (60%), Positives = 271/355 (76%), Gaps = 40/355 (11%)
Query: 5 KIILVTGGTGLVGKAIEKIVK-EEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHV 63
K+ILVTGG+GLVG AI IV+ + E DE WIF +SKEADL+++++T+ LF KYKPTHV
Sbjct: 3 KVILVTGGSGLVGSAIRTIVETQNEALPDEKWIFTNSKEADLNDVQATRDLFEKYKPTHV 62
Query: 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPI 123
IHLAAMVGGLFHNM +NLDF R N+ INDN+L+TS++ VKKVVSCLSTCIFPDKT+YPI
Sbjct: 63 IHLAAMVGGLFHNMDNNLDFLRKNIHINDNILETSFQYNVKKVVSCLSTCIFPDKTSYPI 122
Query: 124 DETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSH 183
+ETM+HNGPPHPSNFGYS+AKR+LD+ NKAYYQ+HGV +TSV+PCNVFGPHDN++L+++H
Sbjct: 123 NETMIHNGPPHPSNFGYSYAKRLLDIANKAYYQKHGVIFTSVVPCNVFGPHDNFDLKNAH 182
Query: 184 VIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKV 243
V+P LI +L+ ++ G D+F V
Sbjct: 183 VVPALIHRLHIALD--------------------------------------NGADKFVV 204
Query: 244 LGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKG 303
LG+GKPLRQFIYSLDLARLF+WVLR YD VEPIILSVDEKDE+TI ++AE IA +F F+G
Sbjct: 205 LGSGKPLRQFIYSLDLARLFVWVLRNYDDVEPIILSVDEKDEITIRQLAEMIAKSFNFQG 264
Query: 304 RITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVARL 358
+ FDT+AADGQ+KKTASN KLR+L P F+FT + A+ ++V WF++N+ ARL
Sbjct: 265 ILEFDTSAADGQIKKTASNDKLRKLL-PNFKFTHLETAIADTVEWFKKNNKQARL 318
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|66547543|ref|XP_625134.1| PREDICTED: probable GDP-L-fucose synthase [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/358 (61%), Positives = 275/358 (76%), Gaps = 38/358 (10%)
Query: 1 MAE-EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYK 59
M+E +KIILVTGGTGLVG+AI+ I+ E K ++E WIF+ SK+A+L + EST++LF KY
Sbjct: 1 MSENKKIILVTGGTGLVGRAIQNII-ETNKNENEKWIFIGSKDANLCDKESTEKLFKKYM 59
Query: 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT 119
PTHVIHLAAMVGGLF+NMSHNLDF R N+ +NDNVL T+++ V KV+SCLSTCIFPDKT
Sbjct: 60 PTHVIHLAAMVGGLFYNMSHNLDFLRNNIHMNDNVLQTAHEHDVVKVISCLSTCIFPDKT 119
Query: 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNL 179
TYPIDE+MVHNGPPHPSN+GYS+AKR++D+ N+AYY+Q+G YTS+IPCNVFGP+DN++
Sbjct: 120 TYPIDESMVHNGPPHPSNYGYSYAKRLIDIQNRAYYEQYGRIYTSIIPCNVFGPNDNFHP 179
Query: 180 ESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGD 239
+SHVIPGL+R+LYD I+ G T
Sbjct: 180 SASHVIPGLMRRLYDLIKDGN-----------------------------------TEDK 204
Query: 240 EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299
EF VLG+GKPLRQFIYSLDLA+L IWVLREY+SVEPIILSVDE EVTI++VAE+IA AF
Sbjct: 205 EFTVLGSGKPLRQFIYSLDLAKLIIWVLREYNSVEPIILSVDESQEVTISQVAESIAQAF 264
Query: 300 QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FKG++ +DT+AADGQ KKTA+N KLR+ P F+FTPF QA++++V W+ EN+ AR
Sbjct: 265 NFKGKLIYDTSAADGQYKKTANNGKLRKYL-PDFQFTPFNQAIKDTVDWYIENYDRAR 321
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340723148|ref|XP_003399958.1| PREDICTED: probable GDP-L-fucose synthase-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/358 (60%), Positives = 274/358 (76%), Gaps = 38/358 (10%)
Query: 1 MAE-EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYK 59
M+E +KIILVTGGTGLVG+AIE ++ E K ++E WIFV SK+ADL + + T++LF K+K
Sbjct: 1 MSEGKKIILVTGGTGLVGRAIEHVI-ETNKNENEKWIFVGSKDADLCDKKDTEKLFEKHK 59
Query: 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT 119
PTHVIHLAAMVGGLFHNM+HNLDF R N+ +NDNVL T+++ G+ KV+SCLSTCIFPDKT
Sbjct: 60 PTHVIHLAAMVGGLFHNMTHNLDFLRRNIHMNDNVLQTAHENGIVKVISCLSTCIFPDKT 119
Query: 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNL 179
TYPIDETM+HNGPPHPSN+GYS+AKR++D+ N+ YY Q+ YTS++PCNVFGP+DN++
Sbjct: 120 TYPIDETMIHNGPPHPSNYGYSYAKRLIDIQNRGYYDQYHRIYTSIVPCNVFGPNDNFHP 179
Query: 180 ESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGD 239
+SHVIPGLIR+LYD I+ G + DK+
Sbjct: 180 SASHVIPGLIRRLYDLIKDGNTE------------------DKV---------------- 205
Query: 240 EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299
F +LG+GKPLRQFIYSLDLA L IWVLREY+SVEPIILSVDE EVTI++VAEAIA AF
Sbjct: 206 -FTILGSGKPLRQFIYSLDLANLIIWVLREYNSVEPIILSVDESQEVTISQVAEAIAQAF 264
Query: 300 QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
FKG++ +DT+AADGQ KKTASN KLR+ P F+FTPF QA++++V W+ +N+ AR
Sbjct: 265 NFKGKLVYDTSAADGQYKKTASNAKLRKYL-PNFQFTPFNQAIKDTVDWYIKNYDRAR 321
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 358 | ||||||
| UNIPROTKB|E2RM30 | 321 | TSTA3 "Uncharacterized protein | 0.555 | 0.619 | 0.633 | 2.8e-103 | |
| RGD|1307028 | 321 | Tsta3 "tissue specific transpl | 0.555 | 0.619 | 0.633 | 9.5e-103 | |
| UNIPROTKB|Q2KIT8 | 321 | TSTA3 "Tissue specific transpl | 0.555 | 0.619 | 0.623 | 2.5e-102 | |
| MGI|MGI:98857 | 321 | Tsta3 "tissue specific transpl | 0.547 | 0.610 | 0.631 | 1.1e-101 | |
| UNIPROTKB|Q13630 | 321 | TSTA3 "GDP-L-fucose synthase" | 0.555 | 0.619 | 0.618 | 3.6e-101 | |
| FB|FBgn0034794 | 321 | Gmer "GDP-4-keto-6-deoxy-D-man | 0.547 | 0.610 | 0.654 | 3.7e-99 | |
| ZFIN|ZDB-GENE-040722-1 | 318 | tsta3 "tissue specific transpl | 0.561 | 0.632 | 0.616 | 6e-99 | |
| ZFIN|ZDB-GENE-061013-348 | 320 | zgc:153776 "zgc:153776" [Danio | 0.558 | 0.625 | 0.616 | 1.2e-98 | |
| ZFIN|ZDB-GENE-071004-107 | 320 | zgc:173683 "zgc:173683" [Danio | 0.558 | 0.625 | 0.616 | 5.3e-98 | |
| ZFIN|ZDB-GENE-050417-317 | 354 | zgc:110348 "zgc:110348" [Danio | 0.558 | 0.564 | 0.606 | 6.9e-96 |
| UNIPROTKB|E2RM30 TSTA3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 694 (249.4 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 126/199 (63%), Positives = 156/199 (78%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ T+ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEDWVFVSSKDADLTDAAQTRALFEKVRPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ GV+KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGVRKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVF 205
GLI K++ G +V+
Sbjct: 190 GLIHKVHLAKSSGSALTVW 208
|
|
| RGD|1307028 Tsta3 "tissue specific transplantation antigen P35B" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 691 (248.3 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 126/199 (63%), Positives = 155/199 (77%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ TQ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGTRKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+TSVIP NVFGP+DN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTSVIPTNVFGPYDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVF 205
GLI K++ G +V+
Sbjct: 190 GLIHKVHLAKSSGSALTVW 208
|
|
| UNIPROTKB|Q2KIT8 TSTA3 "Tissue specific transplantation antigen P35B" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 684 (245.8 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 124/199 (62%), Positives = 156/199 (78%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ T+ LF + +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVEDGARLPGEDWVFVSSKDADLTDAAQTRALFQQVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ GV+KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNIHINDNVLHSAFEVGVRKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGPHDN+++E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPHDNFSIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVF 205
GLI K++ G +V+
Sbjct: 190 GLIHKVHLAKSSGSALTVW 208
|
|
| MGI|MGI:98857 Tsta3 "tissue specific transplantation antigen P35B" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 690 (248.0 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
Identities = 125/198 (63%), Positives = 156/198 (78%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ TQ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGRAIQKVVADGAGLPGEEWVFVSSKDADLTDAAQTQALFQKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ INDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQHG T+T+VIP NVFGP+DN+N+E HV+P
Sbjct: 130 MIHNGPPHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTNVFGPYDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSV 204
GLI K++ + K D ++
Sbjct: 190 GLIHKVH--LAKSSDSAL 205
|
|
| UNIPROTKB|Q13630 TSTA3 "GDP-L-fucose synthase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 680 (244.4 bits), Expect = 3.6e-101, Sum P(2) = 3.6e-101
Identities = 123/199 (61%), Positives = 155/199 (77%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTGG+GLVG E W+FVSSK+ADL++ T+ LF K +PTHVIHL
Sbjct: 10 ILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHL 69
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF N+ +NLDF+R N+ +NDNVL ++++ G +KVVSCLSTCIFPDKTTYPIDET
Sbjct: 70 AAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDET 129
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGYS+AKRM+DV N+AY+QQ+G T+T+VIP NVFGPHDN+N+E HV+P
Sbjct: 130 MIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLP 189
Query: 187 GLIRKLYDTIEKGKDQSVF 205
GLI K++ G +V+
Sbjct: 190 GLIHKVHLAKSSGSALTVW 208
|
|
| FB|FBgn0034794 Gmer "GDP-4-keto-6-deoxy-D-mannose 3,5-epimerase/4-reductase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 708 (254.3 bits), Expect = 3.7e-99, Sum P(2) = 3.7e-99
Identities = 129/197 (65%), Positives = 157/197 (79%)
Query: 5 KIILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
K +LVTGGTGLVG +DE W F SK+ADL+NL +TQ LF++ KPTHVI
Sbjct: 2 KKVLVTGGTGLVGKALEAVIKEQSP-EDEQWFFAGSKDADLTNLAATQALFAREKPTHVI 60
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
HLAAMVGGLFHNM++NLDF R N+ INDNVL T+++QG KVVSCLSTCIFPDKT+YPID
Sbjct: 61 HLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSYPID 120
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
ETMVHNGPPHPSN+GYS+AKR++DV N AY+ ++G YTSVIPCN+FGPHDNYN E SHV
Sbjct: 121 ETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNPEVSHV 180
Query: 185 IPGLIRKLYDTIEKGKD 201
IPG+I +++ + + D
Sbjct: 181 IPGMIYRMHQLVTEKTD 197
|
|
| ZFIN|ZDB-GENE-040722-1 tsta3 "tissue specific transplantation antigen P35B" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 665 (239.2 bits), Expect = 6.0e-99, Sum P(2) = 6.0e-99
Identities = 124/201 (61%), Positives = 153/201 (76%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+LVTGG+GLVG R+ E WIF+SSK+A+L + E T+ +F K++PTHVIHL
Sbjct: 7 VLVTGGSGLVGRAIERVVKEGEGREGEEWIFLSSKDANLLSPEETKAVFEKHRPTHVIHL 66
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF NM NLDF+R N+ INDNVL ++ GV KVVSCLSTCIFPDKTTYPIDET
Sbjct: 67 AAMVGGLFRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTCIFPDKTTYPIDET 126
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGY++AKRM+DV N+A++QQ YT+VIP NVFG HDN+N+E HV+P
Sbjct: 127 MIHNGPPHESNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGCHDNFNIEDGHVLP 186
Query: 187 GLIRKLYDTIEKGKDQSVFES 207
GLI K Y ++GK V+ S
Sbjct: 187 GLIHKTYIAKKEGKPLVVWGS 207
|
|
| ZFIN|ZDB-GENE-061013-348 zgc:153776 "zgc:153776" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 655 (235.6 bits), Expect = 1.2e-98, Sum P(2) = 1.2e-98
Identities = 124/201 (61%), Positives = 152/201 (75%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+LVTGG+GLVG R+ E W F+SSK+A+L + E T+ +F KY+PTHVIHL
Sbjct: 10 VLVTGGSGLVGRAIERVVKDEG-REGEEWTFLSSKDANLLSAEETRAIFQKYRPTHVIHL 68
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF NM NLDF+R N+ INDNVL T+ + GV KVVSCLSTCIFPDKTTYPIDET
Sbjct: 69 AAMVGGLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLSTCIFPDKTTYPIDET 128
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGY+ AKRM+DV N+ ++Q+G YTSVIP NVFG HDN+N++ HV+P
Sbjct: 129 MIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTSVIPTNVFGAHDNFNIDDGHVLP 188
Query: 187 GLIRKLYDTIEKGKDQSVFES 207
GLI K Y ++GK V+ S
Sbjct: 189 GLIHKTYLAKKEGKPLQVWGS 209
|
|
| ZFIN|ZDB-GENE-071004-107 zgc:173683 "zgc:173683" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 654 (235.3 bits), Expect = 5.3e-98, Sum P(2) = 5.3e-98
Identities = 124/201 (61%), Positives = 152/201 (75%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+LVTGG+GLVG R+ E W F+SSKEA+L + + T+ +F KY+PTHVIHL
Sbjct: 10 VLVTGGSGLVGRAIERVVKEEG-REGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVIHL 68
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF NM NLDF+R N+ INDNVL T+ + GV KVVSCLSTCIFPDKTTYPIDET
Sbjct: 69 AAMVGGLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLSTCIFPDKTTYPIDET 128
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGY+ AKRM+DV N+ ++Q+G YT+VIP NVFG HDN+N+E HV+P
Sbjct: 129 MIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAVIPTNVFGAHDNFNIEDGHVLP 188
Query: 187 GLIRKLYDTIEKGKDQSVFES 207
GLI K Y ++GK V+ S
Sbjct: 189 GLIHKTYLAKKEGKPLQVWGS 209
|
|
| ZFIN|ZDB-GENE-050417-317 zgc:110348 "zgc:110348" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 634 (228.2 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 122/201 (60%), Positives = 149/201 (74%)
Query: 7 ILVTGGTGLVGXXXXXXXXXXXXRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+LVTGG+GLVG R E W F+SSKEA+L + + T+ +F KY+PTHVIHL
Sbjct: 44 VLVTGGSGLVGRAIERVVKEEG-RGGEEWTFLSSKEANLLSAKETRAIFEKYRPTHVIHL 102
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AAMVGGLF NM NLDF+R N+ INDNVL T+ + GV KVVSCLSTCIFPDKTTYPIDET
Sbjct: 103 AAMVGGLFRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLSTCIFPDKTTYPIDET 162
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
M+HNGPPH SNFGY+ AKRM+DV N+ ++Q+G YT+ I NVFG HDN+N+E HV+P
Sbjct: 163 MIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAGILTNVFGAHDNFNIEDGHVLP 222
Query: 187 GLIRKLYDTIEKGKDQSVFES 207
GLI K Y ++GK V+ S
Sbjct: 223 GLIHKTYLAKKEGKPLQVWGS 243
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8K3X2 | FCL_CRIGR | 1, ., 1, ., 1, ., 2, 7, 1 | 0.5868 | 0.8687 | 0.9688 | yes | N/A |
| Q55C77 | FCL_DICDI | 1, ., 1, ., 1, ., 2, 7, 1 | 0.5338 | 0.8743 | 0.9781 | yes | N/A |
| P23591 | FCL_MOUSE | 1, ., 1, ., 1, ., 2, 7, 1 | 0.5840 | 0.8687 | 0.9688 | yes | N/A |
| Q5RBE5 | FCL_PONAB | 1, ., 1, ., 1, ., 2, 7, 1 | 0.5783 | 0.8687 | 0.9688 | yes | N/A |
| Q9W1X8 | FCL_DROME | 1, ., 1, ., 1, ., 2, 7, 1 | 0.5892 | 0.8910 | 0.9937 | yes | N/A |
| P55353 | Y4AF_RHISN | No assigned EC number | 0.3177 | 0.7737 | 0.8821 | yes | N/A |
| Q9LMU0 | FCL2_ARATH | 1, ., 1, ., 1, ., 2, 7, 1 | 0.3065 | 0.8324 | 0.9085 | yes | N/A |
| Q13630 | FCL_HUMAN | 1, ., 1, ., 1, ., 2, 7, 1 | 0.5783 | 0.8687 | 0.9688 | yes | N/A |
| Q67WR2 | FCL1_ORYSJ | 1, ., 1, ., 1, ., 2, 7, 1 | 0.2988 | 0.8379 | 0.9146 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 1.1.1.271 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 358 | |||
| cd05239 | 300 | cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte | 1e-156 | |
| PLN02725 | 306 | PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5- | 1e-131 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 3e-54 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 5e-33 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 5e-21 | |
| cd05273 | 328 | cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP- | 6e-21 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 7e-15 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 4e-13 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 4e-11 | |
| TIGR01179 | 328 | TIGR01179, galE, UDP-glucose-4-epimerase GalE | 2e-10 | |
| cd05247 | 323 | cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, | 7e-10 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 9e-10 | |
| COG1087 | 329 | COG1087, GalE, UDP-glucose 4-epimerase [Cell envel | 1e-09 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 4e-09 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 6e-09 | |
| cd05237 | 287 | cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-l | 1e-08 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 3e-08 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 8e-08 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 8e-08 | |
| pfam02719 | 280 | pfam02719, Polysacc_synt_2, Polysaccharide biosynt | 9e-08 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 1e-07 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 2e-07 | |
| COG1086 | 588 | COG1086, COG1086, Predicted nucleoside-diphosphate | 6e-07 | |
| TIGR04130 | 337 | TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehyd | 2e-06 | |
| cd09813 | 335 | cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD | 8e-06 | |
| COG1088 | 340 | COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cel | 3e-05 | |
| cd05234 | 305 | cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, | 5e-05 | |
| cd09811 | 354 | cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD | 6e-05 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 2e-04 | |
| cd05230 | 305 | cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase | 3e-04 | |
| PLN02695 | 370 | PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | 6e-04 | |
| TIGR01181 | 317 | TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehyd | 0.002 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 0.003 |
| >gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 440 bits (1135), Expect = e-156
Identities = 149/344 (43%), Positives = 203/344 (59%), Gaps = 45/344 (13%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTG GLVG AI +++ +R E +F +SKE DL++ E+ + F K KP +VIHL
Sbjct: 2 ILVTGHRGLVGSAIVRVL---ARRGYENVVFRTSKELDLTDQEAVRAFFEKEKPDYVIHL 58
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
AA VGG+ NM++ DF R N+ INDNV+ +++ GVKK+V S+CI+PD PIDE+
Sbjct: 59 AAKVGGIVANMTYPADFLRDNLLINDNVIHAAHRFGVKKLVFLGSSCIYPDLAPQPIDES 118
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIP 186
+ GPP P+N GY+ AKR L +AY +Q+G Y SV+P N++GPHDN++ E+SHVIP
Sbjct: 119 DLLTGPPEPTNEGYAIAKRAGLKLCEAYRKQYGCDYISVMPTNLYGPHDNFDPENSHVIP 178
Query: 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT 246
LIRK + A KL GG E V G+
Sbjct: 179 ALIRKFH--------------EA------------KL------------RGGKEVTVWGS 200
Query: 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306
G P R+F+YS DLAR +++L YD EPII++V E++I E+AEAIA FKG I
Sbjct: 201 GTPRREFLYSDDLARAIVFLLENYD--EPIIVNVGSGVEISIRELAEAIAEVVGFKGEIV 258
Query: 307 FDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFR 350
FDT+ DGQ +K KLR L F FTP +Q ++E+ W+
Sbjct: 259 FDTSKPDGQPRKLLDVSKLRAL--GWFPFTPLEQGIRETYEWYL 300
|
GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|178326 PLN02725, PLN02725, GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Score = 377 bits (969), Expect = e-131
Identities = 118/350 (33%), Positives = 179/350 (51%), Gaps = 45/350 (12%)
Query: 8 LVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67
V G GLVG AI + ++ + + KE DL+ + F+K KPT+VI A
Sbjct: 1 FVAGHRGLVGSAIVRKLEALG---FTNLVLRTHKELDLTRQADVEAFFAKEKPTYVILAA 57
Query: 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETM 127
A VGG+ NM++ DF R N++I NV+D +Y+ GVKK++ S+CI+P PI ET
Sbjct: 58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETA 117
Query: 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPG 187
+ GPP P+N Y+ AK + +AY Q+G S +P N++GPHDN++ E+SHVIP
Sbjct: 118 LLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPA 177
Query: 188 LIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTG 247
LIR+ ++ G + V V G+G
Sbjct: 178 LIRRFHEAKANGAPEVV--------------------------------------VWGSG 199
Query: 248 KPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITF 307
PLR+F++ DLA ++++R Y E + +V DEVTI E+AE + F+G + +
Sbjct: 200 SPLREFLHVDDLADAVVFLMRRYSGAEHV--NVGSGDEVTIKELAELVKEVVGFEGELVW 257
Query: 308 DTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHSVAR 357
DT+ DG +K + KLR L G +F + +QE+ W+ EN+
Sbjct: 258 DTSKPDGTPRKLMDSSKLRSL-GWDPKF-SLKDGLQETYKWYLENYETGG 305
|
Length = 306 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 3e-54
Identities = 72/280 (25%), Positives = 117/280 (41%), Gaps = 60/280 (21%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEE--------KRDDETWIFVSSK--EADLSNLESTQQLFS 56
ILVTGGTG +G + + + +E +R E+ + E DL++ ++ ++L +
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHEGDLTDPDALERLLA 60
Query: 57 KYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116
+ +P VIHLAA G + DF R N+ +L+ + + GVK+ V S+ ++
Sbjct: 61 EVQPDAVIHLAAQSGV-GASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFASSSEVYG 119
Query: 117 DKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176
D PI E GP P Y+ AK + L +AY + +G+ + NV+GP +
Sbjct: 120 DVADPPITEDTPL-GPLSP----YAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPGN- 173
Query: 177 YNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFT 236
+ +HVIP LIR++ +
Sbjct: 174 PDPFVTHVIPALIRRILE------------------------------------------ 191
Query: 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPI 276
G +LG G R F+Y D+AR + L D E
Sbjct: 192 -GKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGEIY 230
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 5e-33
Identities = 88/363 (24%), Positives = 139/363 (38%), Gaps = 65/363 (17%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKEEEK---------RDDETWIFVSSKEADLSNLESTQQL 54
ILVTGG G +G + E+++ D V DL++ + +L
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDEL 60
Query: 55 FSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST-- 112
K P VIHLAA N S +F VN+ N+L+ + GVK+ V S+
Sbjct: 61 A-KGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFV-FASSVS 118
Query: 113 CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFG 172
++ D PIDE + GPP P N Y +K + L +AY + +G+ + P NV+G
Sbjct: 119 VVYGDPPPLPIDEDL---GPPRPLNP-YGVSKLAAEQLLRAYARLYGLPVVILRPFNVYG 174
Query: 173 PHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232
P D +L SS V+ IR+L
Sbjct: 175 PGDKPDL-SSGVVSAFIRQL---------------------------------------- 193
Query: 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVA 292
G + G G R F+Y D+A + L E + E+T+ E+A
Sbjct: 194 --LKGEPIIVIGGDGSQTRDFVYVDDVADALLLAL-ENPDGGVFNIG-SGTAEITVRELA 249
Query: 293 EAIANAFQFKGR-ITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAWFR 350
EA+A A K I + G L++ + G+E ++ + +++ W
Sbjct: 250 EAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALGWEPKVSLEEGLADTLEWLL 309
Query: 351 ENH 353
+
Sbjct: 310 KKL 312
|
Length = 314 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 5e-21
Identities = 55/272 (20%), Positives = 93/272 (34%), Gaps = 76/272 (27%)
Query: 7 ILVTGGTGLVGKAI-EKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65
ILVTGG G +G + ++++ + + V + L V+H
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERGHE------VVV------IDRL------------DVVVH 36
Query: 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDE 125
LAA+VG + + + F N+ N+L+ + K GVK+ V S ++ P +E
Sbjct: 37 LAALVGVPA-SWDNPDEDFETNVVGTLNLLEAARKAGVKRFVYASSASVYGSPEGLPEEE 95
Query: 126 TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVI 185
PP P + Y +K + L ++Y + +G+ + NV+GP L V+
Sbjct: 96 ET----PPRPLSP-YGVSKLAAEHLLRSYGESYGLPVVILRLANVYGPGQRPRL--DGVV 148
Query: 186 PGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG 245
IR+ G V G
Sbjct: 149 NDFIRRAL-------------------------------------------EGKPLTVFG 165
Query: 246 TGKPLRQFIYSLDLARLFIWVLREYDSVEPII 277
G R FI+ D+ R + L +
Sbjct: 166 GGNQTRDFIHVDDVVRAILHALENPLEGGGVY 197
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 91.8 bits (228), Expect = 6e-21
Identities = 81/370 (21%), Positives = 133/370 (35%), Gaps = 81/370 (21%)
Query: 7 ILVTGGTGLVGKAI-EKIV----------------KEEEKRDDETWIFVSSKEADLSNLE 49
LVTG G +G + E++ + DDE F DL +E
Sbjct: 3 ALVTGAGGFIGSHLAERLKAEGHYVRGADWKSPEHMTQPTDDDE---FHL---VDLREME 56
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ + HV HLAA +GG+ + S++ N IN N+L+ + GV++ +
Sbjct: 57 NCLKATEGVD--HVFHLAADMGGMGYIQSNHAVIMYNNTLINFNMLEAARINGVERFLFA 114
Query: 110 LSTCIFP-----DKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTS 164
S C++P + T + E P Y K + L + Y + +G+
Sbjct: 115 SSACVYPEFKQLETTVVRLREEDAWPAEPQD---AYGWEKLATERLCQHYNEDYGIETRI 171
Query: 165 VIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLD 224
V N++GP ++ + RK V ++
Sbjct: 172 VRFHNIYGPRGTWDGGREKAPAAMCRK------------VATAK---------------- 203
Query: 225 LIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKD 284
GD F++ G G R F Y D L E D EP+ L DE
Sbjct: 204 ------------DGDRFEIWGDGLQTRSFTYIDDCVEGLR-RLMESDFGEPVNLGSDE-- 248
Query: 285 EVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRG--PGFEFTPFQQAV 342
V++ E+AE + + I T G + + N L+E G P TP ++ +
Sbjct: 249 MVSMNELAEMVLSFSGKPLEIIHHTPGPQGVRGRNSDNTLLKEELGWEPN---TPLEEGL 305
Query: 343 QESVAWFREN 352
+ + W +E
Sbjct: 306 RITYFWIKEQ 315
|
This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 7e-15
Identities = 68/365 (18%), Positives = 129/365 (35%), Gaps = 84/365 (23%)
Query: 7 ILVTGGTGLVGKAI-EKIVKE------------------EEKRDDETWIFVSSKEADLSN 47
+LVTGG G +G + E++++ E + + +I E D+ +
Sbjct: 2 VLVTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKPNVKFI-----EGDIRD 56
Query: 48 LESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107
E + F +V H AA + ++ + VN+ N+L+ + K GVK+ V
Sbjct: 57 DELVEFAFEG--VDYVFHQAAQ-ASVPRSIEDPIKDHEVNVLGTLNLLEAARKAGVKRFV 113
Query: 108 SCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIP 167
S+ ++ D P DE N P P Y+ +K ++ + + + +G+ S+
Sbjct: 114 YASSSSVYGDPPYLPKDEDHPPN-PLSP----YAVSKYAGELYCQVFARLYGLPTVSLRY 168
Query: 168 CNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIP 227
NV+GP + N + VIP I +
Sbjct: 169 FNVYGPRQDPNGGYAAVIPIFIERALK--------------------------------- 195
Query: 228 FSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVT 287
G+ + G G+ R F Y D+ + + ++ +
Sbjct: 196 ----------GEPPTIYGDGEQTRDFTYVEDVVEANLLAA--TAGAGGEVYNIGTGKRTS 243
Query: 288 IAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTP---FQQAVQE 344
+ E+AE I + + A K ++L G + P F++ ++
Sbjct: 244 VNELAELIREILGKELEPVYAPPRPGDVRHSLADISKAKKLLG----WEPKVSFEEGLRL 299
Query: 345 SVAWF 349
+V WF
Sbjct: 300 TVEWF 304
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 4e-13
Identities = 88/371 (23%), Positives = 134/371 (36%), Gaps = 81/371 (21%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTG TG +G + V+ + V S +D L+ + T L
Sbjct: 1 ILVTGATGFLGSNL---VRALLAQGYRVRALVRSG-SDAVLLDGLPVEVVEGDLTDAASL 56
Query: 67 AAMVGG---LFHNMS-------HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116
AA + G +FH + + +R N++ NVLD + + GV++VV S
Sbjct: 57 AAAMKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEAGVRRVVHTSSIAALG 116
Query: 117 DKTTYPIDETMVHNGPPHPSNFGYSHAKRM--LDVLNKAYYQQHGVTYTSVIPCNVFGPH 174
IDET N P P++ Y +K + L+VL A V V P VFGP
Sbjct: 117 GPPDGRIDETTPWNERPFPND--YYRSKLLAELEVLEAAAEGLDVV---IVNPSAVFGPG 171
Query: 175 DNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFC 234
D GL Y GK + PPG SF +D D+
Sbjct: 172 DEGP-----TSTGLDVLDYL---NGKLPAY-------PPGGTSF-VDVRDV--------- 206
Query: 235 FTGGDEFKVLG------TGKPLRQFIYS---LDLARLFIWVLREYDSVEPIILSVDEKDE 285
G G+ ++I L +LF + I V
Sbjct: 207 --------AEGHIAAMEKGRRGERYILGGENLSFKQLFETLAE--------ITGVKPPRR 250
Query: 286 VTIAEVAEAIANAFQFKGRITFD------TNAADGQLKKTASNRK-LRELRGPGFEFTPF 338
+ +A+A + K R+T A + S+ K REL G+ P
Sbjct: 251 TIPPWLLKAVAALSELKARLTGKPPLLTPRTARVLRRNYLYSSDKARREL---GYSPRPL 307
Query: 339 QQAVQESVAWF 349
++A+++++AW
Sbjct: 308 EEALRDTLAWL 318
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 4e-11
Identities = 75/379 (19%), Positives = 129/379 (34%), Gaps = 97/379 (25%)
Query: 7 ILVTGGTGLVGKAI-EKIVKEEEK---------RDDETWIFVSSKE-ADLSNLESTQQLF 55
+LVTG G +G + E++++E + + + + + + +
Sbjct: 2 VLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDASE 61
Query: 56 SKY--KPTH-VIHLAAMVGGLFHNMSHN--LDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110
+Y K V HLAA++ + S+ L + N+ NVL+ + K+VV
Sbjct: 62 VEYLVKKCDVVFHLAALIAIPY---SYTAPLSYVETNVFGTLNVLEAACVLYRKRVVH-T 117
Query: 111 STC-IFPDKTTYPIDETMVHNGPPHPS------NFGYSHAKRMLDVLNKAYYQQHGVTYT 163
ST ++ PIDE HP YS +K+ D L +Y + G+ T
Sbjct: 118 STSEVYGTAQDVPIDED-------HPLLYINKPRSPYSASKQGADRLAYSYGRSFGLPVT 170
Query: 164 SVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223
+ P N +GP + VIP +I +
Sbjct: 171 IIRPFNTYGP----RQSARAVIPTIISQRAIGQRLIN----------------------- 203
Query: 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSV-EPI------ 276
LG G P R F + D AR FI +L ++V E I
Sbjct: 204 --------------------LGDGSPTRDFNFVKDTARGFIDILDAIEAVGEIINNGSGE 243
Query: 277 ILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT 336
+S+ I E + R + + RK + L G +
Sbjct: 244 EISIGNPAVELIVEELGEMVLIVYDDHREYRPGYSEVERRI--PDIRKAKRLLG----WE 297
Query: 337 P---FQQAVQESVAWFREN 352
P + ++E++ WF++
Sbjct: 298 PKYSLRDGLRETIEWFKDQ 316
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|213592 TIGR01179, galE, UDP-glucose-4-epimerase GalE | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 7 ILVTGGTGLVG---------KAIEKIV-------KEEEKRDDETWIFVSSKEADLSNLES 50
ILVTGG G +G E ++ E E V+ E DL + E
Sbjct: 2 ILVTGGAGYIGSHTVRQLLESGHEVVILDNLSNGSREALPRGERITPVTFVEGDLRDREL 61
Query: 51 TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110
+LF ++K VIH A ++ + ++ L ++R N+ N+L+ + GVKK +
Sbjct: 62 LDRLFEEHKIDAVIHFAGLI-AVGESVQKPLKYYRNNVVGTLNLLEAMQQAGVKKFIFSS 120
Query: 111 STCIFPDKTTYPIDETMVHNGPPHPSN-FGYSH--AKRMLDVLNKAYYQQHGVTYTSVIP 167
S ++ + ++ PI E P P N +G S ++++L L KA +Y +
Sbjct: 121 SAAVYGEPSSIPISEDS----PLGPINPYGRSKLMSEQILRDLQKA---DPDWSYVILRY 173
Query: 168 CNVFGPHDNYNL-ESSHVIPGLIRKLYDTIEKGKDQ-SVF 205
NV G H + ++ E I LI +D+ ++F
Sbjct: 174 FNVAGAHPSGDIGEDPPGITHLIPYACQVAVGKRDKLTIF 213
|
Alternate name: UDPgalactose 4-epimerase This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from This model and described by a separate model [Energy metabolism, Sugars]. Length = 328 |
| >gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 59.1 bits (144), Expect = 7e-10
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 46/210 (21%)
Query: 7 ILVTGGTGLVG---------------------KAIEKIVKEEEKRDDETWIFVSSKEADL 45
+LVTGG G +G + + EK E F E D+
Sbjct: 2 VLVTGGAGYIGSHTVVELLEAGYDVVVLDNLSNGHREALPRIEKIRIE---FY---EGDI 55
Query: 46 SNLESTQQLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV 103
+ + ++F+++K VIH AA+ VG ++ L ++ N+ N+L+ GV
Sbjct: 56 RDRAALDKVFAEHKIDAVIHFAALKAVG---ESVQKPLKYYDNNVVGTLNLLEAMRAHGV 112
Query: 104 KKVV-SCLSTC-IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVT 161
K V S S+ ++ + T PI E P +P+N Y K M++ + + + G+
Sbjct: 113 KNFVFS--SSAAVYGEPETVPITEEA----PLNPTN-PYGRTKLMVEQILRDLAKAPGLN 165
Query: 162 YTSVIPCNVFGPHDN-----YNLESSHVIP 186
Y + N G H + +++IP
Sbjct: 166 YVILRYFNPAGAHPSGLIGEDPQIPNNLIP 195
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 9e-10
Identities = 82/382 (21%), Positives = 139/382 (36%), Gaps = 103/382 (26%)
Query: 7 ILVTGGTGLVGKA-IEKIVKE---------------------EEKRDDETWIFVSSKEAD 44
ILVTGG G +G + ++ + E+ + FV + D
Sbjct: 3 ILVTGGAGFIGSNFVRYLLNKYPDYKIINLDKLTYAGNLENLEDVSSSPRYRFV---KGD 59
Query: 45 LSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHN-------LDFFRVNMKINDNVLDT 97
+ + E +LF + K VIH AA SH F R N+ +L+
Sbjct: 60 ICDAELVDRLFEEEKIDAVIHFAAE--------SHVDRSISDPEPFIRTNVLGTYTLLEA 111
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDET--MVHNGPPHPSNFGYSHAKRMLDVLNKAYY 155
+ K GVK+ V +ST D+ + + P P++ YS +K D+L +AY+
Sbjct: 112 ARKYGVKRFVH-IST----DEVYGDLLDDGEFTETSPLAPTS-PYSASKAAADLLVRAYH 165
Query: 156 QQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGA 215
+ +G+ N +GP+ +IP I
Sbjct: 166 RTYGLPVVITRCSNNYGPYQF----PEKLIPLFILNA----------------------- 198
Query: 216 NSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEP 275
LD L + G G +R ++Y D AR VL + E
Sbjct: 199 ----LDGKPL----------------PIYGDGLNVRDWLYVEDHARAIELVLEKGRVGE- 237
Query: 276 IILSVDEKDEVTIAEVAEAIANAF-QFKGRITF--DTNAADGQLKKTASNRKLRELRGPG 332
I ++ +E+T E+ + I + + IT+ D D + +S K+R G
Sbjct: 238 -IYNIGGGNELTNLELVKLILELLGKDESLITYVKDRPGHDRRYAIDSS--KIRRELGW- 293
Query: 333 FEFTPFQQAVQESVAWFRENHS 354
F++ ++++V W+ EN
Sbjct: 294 RPKVSFEEGLRKTVRWYLENRW 315
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 58.3 bits (142), Expect = 1e-09
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 31/201 (15%)
Query: 7 ILVTGGTGLVGK--AIEKIVKEEE----------KRDDETWIFVSSKEADLSNLESTQQL 54
+LVTGG G +G + + E + + E DL + +
Sbjct: 3 VLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAV 62
Query: 55 FSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV-SCLS 111
F + K V+H AA VG ++ + L ++ N+ N+++ + GVKK + S S
Sbjct: 63 FEENKIDAVVHFAASISVG---ESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFS--S 117
Query: 112 TC-IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNV 170
T ++ + TT PI ET P P N Y +K M + + + + + + NV
Sbjct: 118 TAAVYGEPTTSPISETS----PLAPIN-PYGRSKLMSEEILRDAAKANPFKVVILRYFNV 172
Query: 171 FGPHDNYNL-ES----SHVIP 186
G + L + + +IP
Sbjct: 173 AGACPDGTLGQRYPGATLLIP 193
|
Length = 329 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 4e-09
Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 41/226 (18%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEA--------------DLSNLESTQ 52
+LVTGG+G G+ + K + E ++ EA D+++ +
Sbjct: 2 VLVTGGSGFFGERLVKQLLERGGTYVRSFDIAPPGEALSAWQHPNIEFLKGDITDRNDVE 61
Query: 53 QLFSKYKPTHVIHLAAMVGGLFHNMSHNLD-FFRVNMKINDNVLDTSYKQGVKKVV-SCL 110
Q S V H AA+V D ++ VN+ NVLD + GV+K V +
Sbjct: 62 QALSGA--DCVFHTAAIVPLA-----GPRDLYWEVNVGGTQNVLDACQRCGVQKFVYTSS 114
Query: 111 STCIFPDKTTYPIDETMVHNGPPHPS--NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPC 168
S+ IF + + DET+ P+P + Y+ K + +++ + + ++ P
Sbjct: 115 SSVIFGGQNIHNGDETL-----PYPPLDSDMYAETKAIAEIIVLEANGRDDLLTCALRPA 169
Query: 169 NVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES-RARFPP 213
+FGP D GL+ L++ EKG + VF
Sbjct: 170 GIFGPGD----------QGLVPILFEWAEKGLVKFVFGRGNNLVDF 205
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 6e-09
Identities = 44/213 (20%), Positives = 87/213 (40%), Gaps = 33/213 (15%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEA-----DLSNLESTQQLFSKYKPT 61
IL+TG TG++G+A+ +++KE I A DL++ ++ ++ YKP
Sbjct: 2 ILITGATGMLGRALVRLLKE----RGYEVIGTGRSRASLFKLDLTDPDAVEEAIRDYKPD 57
Query: 62 HVIHLAAMVGGLFHNMSHNLDF-FRVNMKINDNVLDTSYKQGVKKVVSCLST-CIFPDKT 119
+I+ AA + + +RVN+ +N+ + + G + + +ST +F D
Sbjct: 58 VIINCAAYTR--VDKCESDPELAYRVNVLAPENLARAAKEVGARLIH--ISTDYVF-DGK 112
Query: 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNL 179
P E P+P N Y +K + +V ++ + TS + +G N
Sbjct: 113 KGPYKEE----DAPNPLNV-YGKSKLLGEVAVLNANPRYLILRTSWL----YGELKNGE- 162
Query: 180 ESSHVIPGLIRKLYDTIEKGKDQSVFESRARFP 212
+ + + K+ +V + P
Sbjct: 163 -------NFVEWMLRLAAERKEVNVVHDQIGSP 188
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|187548 cd05237, UDP_invert_4-6DH_SDR_e, UDP-Glcnac (UDP-linked N-acetylglucosamine) inverting 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 1e-08
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 58/230 (25%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKEEEKR-----DDETWIFVSSKE--------------AD 44
K ILVTGG G +G + +I+K K+ DE + +E D
Sbjct: 3 KTILVTGGAGSIGSELVRQILKFGPKKLIVFDRDENKLHELVRELRSRFPHDKLRFIIGD 62
Query: 45 LSNLESTQQLFSKYKPTHVIHLAAMVGGLFH--NMSHN-LDFFRVNMKINDNVLDTSYKQ 101
+ + E ++ F + P V H AA L H +M N + + N+ NV+D + +
Sbjct: 63 VRDKERLRRAFKERGPDIVFHAAA----LKHVPSMEDNPEEAIKTNVLGTKNVIDAAIEN 118
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVT 161
GV+K V C+ST DK P+ N KR+ + L A + T
Sbjct: 119 GVEKFV-CIST----DKAVNPV-------------NV-MGATKRVAEKLLLAKNEYSSST 159
Query: 162 -YTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRAR 210
+++V NV G V+P ++ I+KG +V +
Sbjct: 160 KFSTVRFGNVLG-------SRGSVLPLFKKQ----IKKGGPLTVTDPDMT 198
|
UDP-Glcnac inverting 4,6-dehydratase was identified in Helicobacter pylori as the hexameric flaA1 gene product (FlaA1). FlaA1 is hexameric, possesses UDP-GlcNAc-inverting 4,6-dehydratase activity, and catalyzes the first step in the creation of a pseudaminic acid derivative in protein glycosylation. Although this subgroup has the NADP-binding motif characteristic of extended SDRs, its members tend to have a Met substituted for the active site Tyr found in most SDR families. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 287 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 25/184 (13%)
Query: 7 ILVTGGTGLVGKA----------IEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFS 56
ILVTG G +G+ + + + +R + V D+ + + +F
Sbjct: 1 ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPPGSPPKVEYVRLDIRDPAA-ADVFR 59
Query: 57 KYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIF- 115
+ + V+HLA ++ R+N+ NVLD GV +VV S ++
Sbjct: 60 EREADAVVHLAFILDPPRDGAER----HRINVDGTQNVLDACAAAGVPRVVVTSSVAVYG 115
Query: 116 --PDKTTYPIDETMVHNGPPHPS-NFGYSHAKRMLDVLNKAYYQQH-GVTYTSVIPCNVF 171
PD P+ E + P S F YS K ++ L + ++H + T + P +
Sbjct: 116 AHPDNPA-PLTE----DAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATIL 170
Query: 172 GPHD 175
GP
Sbjct: 171 GPGT 174
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 8e-08
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 24/187 (12%)
Query: 7 ILVTGGTGLVGKAIEK--IVKEEEKR---DDETWIFVSSKEADLSNLESTQQLFSKYKPT 61
+LVTG G +G+A+ + + EE R + S A+L +++S LF
Sbjct: 2 VLVTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLAELPDIDSFTDLFLGV--D 59
Query: 62 HVIHLAAMVGGLFHNMSHN-----LDFFRVNMKINDNVLDTSYKQGVKKVVSCLST--CI 114
V+HLAA V H M+ D+ +VN ++ + + +QGVK+ V LS+
Sbjct: 60 AVVHLAARV----HVMNDQGADPLSDYRKVNTELTRRLARAAARQGVKRFVF-LSSVKVN 114
Query: 115 FPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH 174
P DET PP P + Y +K + G+ + P V+GP
Sbjct: 115 GEGTVGAPFDETD----PPAPQD-AYGRSKLEAERALLELGASDGMEVVILRPPMVYGPG 169
Query: 175 DNYNLES 181
N
Sbjct: 170 VRGNFAR 176
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 8e-08
Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 36/195 (18%)
Query: 8 LVTGGTGLVGKAIEK-IVKEEEKRDDETW--IFVSSKEADLSNLE----------STQQL 54
LVTGG G +G+ I + +++E E ++ + F D S L+ Q L
Sbjct: 1 LVTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDL 60
Query: 55 FSKYKPTH-VIHLAA--MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111
+ + VIH AA V G + + +VN+K NVLD K GV+ +V S
Sbjct: 61 RRALQGSDVVIHTAAIIDVFGKAYRDT----IMKVNVKGTQNVLDACVKAGVRVLVYTSS 116
Query: 112 -TCIFPDKTTYPI---DETMVHNGPPHPSNFG--YSHAKRMLD--VL--NKAYYQQHGVT 161
+ P+ PI DET P+ S Y +K + + VL N + + G
Sbjct: 117 MEVVGPNSYGQPIVNGDETT-----PYESTHQDPYPESKALAEKLVLKANGSTLKNGGRL 171
Query: 162 YTSVI-PCNVFGPHD 175
YT + P +FG D
Sbjct: 172 YTCALRPAGIFGEGD 186
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|217199 pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein | Back alignment and domain information |
|---|
Score = 52.5 bits (127), Expect = 9e-08
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 30/139 (21%)
Query: 7 ILVTGGTGLVGKAI-EKIVKEEEKR-----DDETWIFVSSKE--------------ADLS 46
+LVTGG G +G + +I+K K+ DE ++ +E D+
Sbjct: 1 VLVTGGGGSIGSELCRQILKFNPKKIILFSRDEFKLYEIRQELRQEYNDPKLRFFIGDVR 60
Query: 47 NLESTQQLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK 104
+ E ++ ++ V H AA+ V + +N ++ + N+ +NV + + + GV+
Sbjct: 61 DRERLERAMEQHGVDTVFHAAALKHVPLVEYNP---MEAIKTNVLGTENVAEAAIENGVE 117
Query: 105 KVVSCLSTCIFPDKTTYPI 123
K V +ST DK P
Sbjct: 118 KFV-LIST----DKAVNPT 131
|
This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein mannosyl-transferase and several putative epimerases (e.g. WbiI). Length = 280 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 1e-07
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
IL+TG G +G + + + E + I E D+++ ++ ++ + +P VI+
Sbjct: 3 ILITGANGQLGTELRRALPGEFE-----VIATDRAELDITDPDAVLEVIRETRPDVVINA 57
Query: 67 AAMVGGLFHNMSHNLDF--------FRVNMKINDNVLDTSYKQGVKKVVSCLST-CIFPD 117
AA +D F VN +N+ + + G + V +ST +F
Sbjct: 58 AAY---------TAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH--ISTDYVFDG 106
Query: 118 KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176
+ P ET P+P N Y +K + +A +H + TS V+G + N
Sbjct: 107 EKGGPYKET----DTPNPLNV-YGRSKLAGEEAVRAAGPRHLILRTSW----VYGEYGN 156
|
Length = 281 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 2e-07
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
ILVTG G +G+ + +++ E + + E DL++ E+ L + +P V++
Sbjct: 1 ILVTGANGQLGRELTRLLAER----GVEVVALDRPELDLTDPEAVAALVREARPDVVVNA 56
Query: 67 AA 68
AA
Sbjct: 57 AA 58
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|224011 COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 6e-07
Identities = 53/225 (23%), Positives = 84/225 (37%), Gaps = 58/225 (25%)
Query: 1 MAEEKIILVTGGTGLVGKAI-EKIVKEEEKR-----DDETWIFVSSKE------------ 42
M K +LVTGG G +G + +I+K K DE +++ E
Sbjct: 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRF 306
Query: 43 --ADLSNLESTQQLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKINDNVLDTS 98
D+ + + ++ +K V H AA+ V + +N + + N+ +NV + +
Sbjct: 307 YIGDVRDRDRVERAMEGHKVDIVFHAAALKHVPLVEYNP---EEAIKTNVLGTENVAEAA 363
Query: 99 YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---Y 155
K GVKK V +ST DK P + KR+ + L +A
Sbjct: 364 IKNGVKKFV-LIST----DKAVNPTNV--------------MGATKRLAEKLFQAANRNV 404
Query: 156 QQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGK 200
G + V NV G VIP L +K I +G
Sbjct: 405 SGTGTRFCVVRFGNVLG-------SRGSVIP-LFKKQ---IAEGG 438
|
Length = 588 |
| >gnl|CDD|200381 TIGR04130, FnlA, UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 2e-06
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 18/137 (13%)
Query: 1 MAEEKIILVTGGTGLVGKAI-----EKIVKE-------EEKRDDETWIFVSSK-EADLSN 47
M ++KI+L+TGGTG G A+ + +KE E+K+DD + +SK + + +
Sbjct: 1 MFKDKILLITGGTGSFGNAVLRRFLDTDIKEIRIFSRDEKKQDDMRKKYNNSKLKFYIGD 60
Query: 48 LESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107
+ + + + + I+ AA + + H ++ + N+ +NVL+ + GVK+VV
Sbjct: 61 VRDYRSILNATRGVDFIYHAAALKQVPSCEFHPMEAVKTNVLGTENVLEAAIANGVKRVV 120
Query: 108 SCLSTCIFPDKTTYPID 124
CLST DK YPI+
Sbjct: 121 -CLST----DKAVYPIN 132
|
The FnlA enzyme is the first step in the biosynthesis of UDP-FucNAc from UDP-GlcNAc in E. coli (along with FnlB and FnlC). The proteins identified by this model include FnlA homologs in the O-antigen clusters of O4, O25, O26, O29 (Shigella D11), O118, O145 and O172 serotype strains, all of which produce O-antigens containing FucNAc (or the further modified FucNAm). A homolog from Pseudomonas aerugiosa serotype O11, WbjB, also involved in the biosynthesis of UDP-FucNAc has been characterized and is now believed to carry out both the initial 4,6-dehydratase reaction and the subsequent epimerization of the resulting methyl group at C-5. A phylogenetic tree of related sequences shows a distinct clade of enzymes involved in the biosynthesis of UDP-QuiNAc (Qui=qinovosamine). This clade appears to be descendant from the common ancestor of the Pseudomonas and E. coli fucose-biosynthesis enzymes. It has been hypothesized that the first step in the biosynthesis of these two compounds may be the same, and thus that these enzymes all have the same function. At present, lacking sufficient confirmation of this, the current model trusted cutoff only covers the tree segment surrounding the E. coli genes. The clades containing the Pseudomonas and QuiNAc biosynthesis enzymes score above the noise cutoff. Immediately below the noise cutoff are enzymes involved in the biosynthesis of UDP-RhaNAc (Rha=rhamnose), which again may or may not produce the same product. Length = 337 |
| >gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 8e-06
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 39/202 (19%)
Query: 8 LVTGGTGLVGKA-IEKIVKEEE------------KRDDETWIFVSSKEADLSNLESTQQL 54
LV GG+G +G+ +E++++ + D + V DL++ + ++
Sbjct: 3 LVVGGSGFLGRHLVEQLLRRGNPTVHVFDIRPTFELDPSSSGRVQFHTGDLTDPQDLEKA 62
Query: 55 FSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS-TC 113
F++ P V H A+ G S++ +++VN++ NV++ K GVKK+V S +
Sbjct: 63 FNEKGPNVVFHTASPDHG-----SNDDLYYKVNVQGTRNVIEACRKCGVKKLVYTSSASV 117
Query: 114 IFPDKTTYPIDETMVHNGPPHPSNF--GYSHAK----RMLDVLNKAYYQQHGVTYTSVIP 167
+F + DE++ P+P Y+ K ++ VL KA + G+ ++ P
Sbjct: 118 VFNGQDIINGDESL-----PYPDKHQDAYNETKALAEKL--VL-KANDPESGLLTCALRP 169
Query: 168 CNVFGPHDNYNLESSHVIPGLI 189
+FGP D ++PGL+
Sbjct: 170 AGIFGPGD------RQLVPGLL 185
|
This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335 |
| >gnl|CDD|224013 COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 3e-05
Identities = 47/207 (22%), Positives = 76/207 (36%), Gaps = 64/207 (30%)
Query: 7 ILVTGGTGLVGKA-IEKIVKEEEKR---------------------DDETWIFVSSKEAD 44
ILVTGG G +G + I+ + D + FV + D
Sbjct: 3 ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFV---QGD 59
Query: 45 LSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHN-------LDFFRVNMKINDNVLDT 97
+ + E +LF +Y+P V+H AA SH F + N+ +L+
Sbjct: 60 ICDRELVDRLFKEYQPDAVVHFAA--------ESHVDRSIDGPAPFIQTNVVGTYTLLEA 111
Query: 98 S--YKQGVKKV-VS--------CLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRM 146
+ Y + +S L F + T Y +PS+ YS +K
Sbjct: 112 ARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPY------------NPSS-PYSASKAA 158
Query: 147 LDVLNKAYYQQHGVTYTSVIPCNVFGP 173
D+L +AY + +G+ T N +GP
Sbjct: 159 SDLLVRAYVRTYGLPATITRCSNNYGP 185
|
Length = 340 |
| >gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 28/201 (13%)
Query: 7 ILVTGGTGLVGK-AIEKIVKEEEK----------RDDETWIFVSSKEADL--SNLESTQQ 53
ILVTGG G +G ++++++E + R + +K +L T
Sbjct: 2 ILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFENKAFRFVKRDLLDTAD 61
Query: 54 LFSKYKPTHVIHLAAMVGGLFHNMSHNLDF-FRVNMKINDNVLDTSYKQGVKKVVSCLST 112
+K V HLAA + + D N+ NVL+ GVK++V S+
Sbjct: 62 KVAKKDGDTVFHLAANPD--VRLGATDPDIDLEENVLATYNVLEAMRANGVKRIVFASSS 119
Query: 113 CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFG 172
++ + P E + PP P + Y +K + L AY G N+ G
Sbjct: 120 TVYGEAKVIPTPE----DYPPLPISV-YGASKLAAEALISAYAHLFGFQAWIFRFANIVG 174
Query: 173 PHDNYNLESSH-VIPGLIRKL 192
P S+H VI I KL
Sbjct: 175 P------RSTHGVIYDFINKL 189
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 6e-05
Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 39/212 (18%)
Query: 8 LVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKY-------KP 60
LVTGG G +G+ I +++ E ++ E + + +L Q + K
Sbjct: 3 LVTGGGGFLGQHIIRLLLERKEELKEIRVLDKAFGPELIEHFEKSQGKTYVTDIEGDIKD 62
Query: 61 THVIHLA-AMVGGLFHNMS--------HNLDFFRVNMKINDNVLDTSYKQGVKKVV--SC 109
+ A V + H + + + VN+ VL+ + VK++V S
Sbjct: 63 LSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQNNVKRLVYTSS 122
Query: 110 LSTCIFPDKTTYPI----DETMVHNGPPHPSNFGYSHAKRMLD--VL--NKAYYQQHGVT 161
+ P+ PI ++T + P Y+ +K + + VL N A +Q G
Sbjct: 123 IEVA-GPNFKGRPIFNGVEDTPYEDTSTPP----YASSKLLAENIVLNANGAPLKQGGYL 177
Query: 162 YTSVI-PCNVFGPHDNYNLESSHVIPGLIRKL 192
T + P ++G E SH + + L
Sbjct: 178 VTCALRPMYIYG-------EGSHFLTEIFDFL 202
|
This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 2e-04
Identities = 39/177 (22%), Positives = 66/177 (37%), Gaps = 34/177 (19%)
Query: 7 ILVTGGTGLVGKAIEK-----------IVKEEEKRDDETWIFVSSKEADLSNLESTQQLF 55
IL+ G TG +G+A+ + +V+ ++ E V+ E DL +L+S
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDSLSDAV 60
Query: 56 SKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIF 115
VIHLA G + + + NVL+ + + GVK + S +
Sbjct: 61 Q--GVDVVIHLA----GAPRDTRDFCEVDVEGTR---NVLEAAKEAGVKHFIFISSLGAY 111
Query: 116 PDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFG 172
D P PS+ Y K + + + + YT V P ++G
Sbjct: 112 GDLHEE---------TEPSPSSP-YLAVKAKTEAVLREA----SLPYTIVRPGVIYG 154
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 75/364 (20%), Positives = 138/364 (37%), Gaps = 77/364 (21%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKEEEK---RDDETWIFVSSKEADLSNLES---------- 50
K IL+TGG G +G + ++++++ + D+ F + ++ ++ +L
Sbjct: 1 KRILITGGAGFLGSHLCDRLLEDGHEVICVDN----FFTGRKRNIEHLIGHPNFEFIRHD 56
Query: 51 -TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
T+ L+ + + HLA H + + + N+ N+L + + G + +++
Sbjct: 57 VTEPLYLEVD--QIYHLACPASP-VHYQYNPIKTLKTNVLGTLNMLGLAKRVGARVLLAS 113
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
S ++ D +P E+ N P Y KR+ + L AY++QHGV N
Sbjct: 114 TSE-VYGDPEVHPQPESYWGNVNPIGPRSCYDEGKRVAETLCMAYHRQHGVDVRIARIFN 172
Query: 170 VFGP--HDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIP 227
+GP H N V+ I + +G+ +V+
Sbjct: 173 TYGPRMHPND----GRVVSNFIVQAL----RGEPITVY---------------------- 202
Query: 228 FSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVT 287
G G R F Y DL I ++ P+ L E E T
Sbjct: 203 -----------------GDGTQTRSFQYVSDLVEGLIRLMNSDYFGGPVNLGNPE--EFT 243
Query: 288 IAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESV 346
I E+AE + K I F D ++ K +EL G+E P ++ ++ ++
Sbjct: 244 ILELAELVKKLTGSKSEIVFLPLPEDDPKRRRPDISKAKELL--GWEPKVPLEEGLRRTI 301
Query: 347 AWFR 350
+FR
Sbjct: 302 EYFR 305
|
UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|178298 PLN02695, PLN02695, GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 6e-04
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 24/133 (18%)
Query: 2 AEEKI-ILVTGGTGLVGKAIEKIVKEEE--------KRDDETWIFVSSKE-------ADL 45
EK+ I +TG G + I + +K E K+++ +S DL
Sbjct: 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNE----HMSEDMFCHEFHLVDL 73
Query: 46 SNLESTQQLFSKYKPTHVIHLAAMVGGL-FHNMSHNLDFFRVNMKINDNVLDTSYKQGVK 104
+E+ ++ HV +LAA +GG+ F +H++ + N I+ N+L+ + GVK
Sbjct: 74 RVMENCLKVTKGVD--HVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEAARINGVK 130
Query: 105 KVVSCLSTCIFPD 117
+ S CI+P+
Sbjct: 131 RFFYASSACIYPE 143
|
Length = 370 |
| >gnl|CDD|130249 TIGR01181, dTDP_gluc_dehyt, dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.002
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 39/195 (20%)
Query: 7 ILVTGGTGLVGKA-IEKIVKEEEKR---------------------DDETWIFVSSKEAD 44
ILVTGG G +G + I+ E D+ + FV + D
Sbjct: 2 ILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFV---KGD 58
Query: 45 LSNLESTQQLFSKYKPTHVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSYKQ 101
+ + E +LF++++P V+H AA H ++S F N+ +L+ K
Sbjct: 59 IGDRELVSRLFTEHQPDAVVHFAAES----HVDRSISGPAAFIETNVVGTYTLLEAVRKY 114
Query: 102 GVKKVVSCLSTCIFPDKTTYPI--DETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHG 159
+ +ST D+ + + P PS+ YS +K D L +AY++ +G
Sbjct: 115 WHEFRFHHIST----DEVYGDLEKGDAFTETTPLAPSS-PYSASKAASDHLVRAYHRTYG 169
Query: 160 VTYTSVIPCNVFGPH 174
+ N +GP+
Sbjct: 170 LPALITRCSNNYGPY 184
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 317 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 38.6 bits (91), Expect = 0.003
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 28/116 (24%)
Query: 1 MAEEKIILVTGGTGLVGKAI-EKIVKEE---------EKRDDETWI---------FVSSK 41
E K+ LVTG + +G+AI E++ + + E + ++ +
Sbjct: 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61
Query: 42 EADLSNLESTQQLFSKYKPTH-----VIHLAA-MVGGLFHNMSHNLDFFRVNMKIN 91
D+S+ ES ++ + K +++ A L M D+ RV + N
Sbjct: 62 -GDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEE-DWDRV-IDTN 114
|
Length = 248 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 358 | |||
| KOG1431|consensus | 315 | 100.0 | ||
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| KOG1429|consensus | 350 | 100.0 | ||
| KOG0747|consensus | 331 | 100.0 | ||
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| KOG1371|consensus | 343 | 100.0 | ||
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| KOG1502|consensus | 327 | 100.0 | ||
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| KOG1430|consensus | 361 | 100.0 | ||
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.97 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.97 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.97 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.97 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.97 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.96 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.96 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.96 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.96 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.96 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.95 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.95 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.92 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.92 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.91 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.91 | |
| KOG2774|consensus | 366 | 99.9 | ||
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.9 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.88 | |
| KOG1372|consensus | 376 | 99.88 | ||
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.86 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.85 | |
| KOG2865|consensus | 391 | 99.84 | ||
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.84 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| KOG1221|consensus | 467 | 99.82 | ||
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.82 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.82 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.81 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.8 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.8 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.79 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.79 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.77 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.76 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.76 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.75 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.74 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.74 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.74 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.73 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.71 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.71 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.71 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.7 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.7 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.7 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.7 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.7 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.68 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.68 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.67 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.67 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.66 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.65 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.65 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.65 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.64 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.64 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.64 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.63 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.62 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.62 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.62 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.62 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.62 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.62 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.61 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.61 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.61 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.6 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.6 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.59 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.59 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.59 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.59 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.58 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.58 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.57 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.57 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.56 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.56 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.55 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.55 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.55 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.54 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.54 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.53 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.52 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.51 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.51 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.5 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.49 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.48 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.47 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.47 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.47 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.47 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.47 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.46 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.45 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.45 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.45 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.45 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.43 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.43 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.43 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.42 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.41 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.4 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.4 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.39 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.39 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.39 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.38 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.38 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.37 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.37 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.37 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.36 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.36 | |
| KOG3019|consensus | 315 | 99.35 | ||
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.29 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.29 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.28 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.26 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.25 | |
| KOG4039|consensus | 238 | 99.24 | ||
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.24 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.22 | |
| KOG1203|consensus | 411 | 99.21 | ||
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.2 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.2 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.2 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.2 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.19 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.19 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.19 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.18 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.15 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.15 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.14 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.14 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.1 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.09 | |
| KOG4288|consensus | 283 | 99.08 | ||
| KOG1205|consensus | 282 | 99.07 | ||
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.07 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.0 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.98 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.94 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.9 | |
| KOG1208|consensus | 314 | 98.85 | ||
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.83 | |
| KOG1209|consensus | 289 | 98.76 | ||
| KOG1201|consensus | 300 | 98.75 | ||
| KOG1610|consensus | 322 | 98.75 | ||
| PLN00106 | 323 | malate dehydrogenase | 98.73 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.7 | |
| KOG0725|consensus | 270 | 98.68 | ||
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.66 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.65 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.64 | |
| KOG1200|consensus | 256 | 98.61 | ||
| KOG1210|consensus | 331 | 98.54 | ||
| KOG1611|consensus | 249 | 98.52 | ||
| KOG4169|consensus | 261 | 98.41 | ||
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.34 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 98.29 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.16 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.12 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.12 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.11 | |
| KOG1204|consensus | 253 | 98.08 | ||
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.02 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.9 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.85 | |
| KOG1478|consensus | 341 | 97.81 | ||
| KOG1014|consensus | 312 | 97.77 | ||
| KOG1207|consensus | 245 | 97.71 | ||
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.69 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.6 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.52 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 97.49 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.46 | |
| KOG1199|consensus | 260 | 97.45 | ||
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.44 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.33 | |
| KOG2733|consensus | 423 | 97.22 | ||
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.09 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.04 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 96.86 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 96.85 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.83 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.81 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 96.81 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 96.79 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 96.72 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.72 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 96.69 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.64 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 96.61 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.6 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 96.56 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.52 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.49 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.34 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 96.2 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.16 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.11 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.06 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 95.96 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.93 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 95.93 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 95.9 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.85 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 95.82 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 95.72 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 95.71 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 95.59 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 95.58 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 95.55 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 95.48 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.39 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 95.3 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.3 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 95.27 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 95.19 | |
| KOG1494|consensus | 345 | 95.13 | ||
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.08 | |
| KOG4022|consensus | 236 | 95.08 | ||
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 95.07 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 95.07 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.07 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 95.02 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.0 | |
| KOG2018|consensus | 430 | 95.0 | ||
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 94.99 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 94.98 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 94.95 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 94.95 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 94.64 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 94.55 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 94.47 | |
| PLN02602 | 350 | lactate dehydrogenase | 94.44 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 94.41 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 94.39 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 94.39 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 94.29 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 94.26 | |
| PRK08223 | 287 | hypothetical protein; Validated | 94.2 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 94.19 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 94.15 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 94.13 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 94.11 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 94.06 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 94.05 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 94.0 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 93.97 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 93.94 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 93.91 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 93.79 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 93.7 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 93.7 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 93.61 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 93.54 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 93.45 | |
| PRK05678 | 291 | succinyl-CoA synthetase subunit alpha; Validated | 93.32 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 93.3 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 93.11 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 93.02 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 92.72 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 92.72 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 92.71 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 92.62 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 92.52 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 92.43 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 92.42 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 92.41 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 92.31 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 92.01 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 91.96 | |
| TIGR00877 | 423 | purD phosphoribosylamine--glycine ligase. This enz | 91.93 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 91.91 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 91.87 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 91.86 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 91.78 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 91.77 | |
| KOG1202|consensus | 2376 | 91.74 | ||
| PRK14851 | 679 | hypothetical protein; Provisional | 91.74 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 91.69 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 91.69 | |
| PLN00125 | 300 | Succinyl-CoA ligase [GDP-forming] subunit alpha | 91.46 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 91.32 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 91.24 | |
| KOG1198|consensus | 347 | 91.09 | ||
| PRK13789 | 426 | phosphoribosylamine--glycine ligase; Provisional | 90.99 | |
| KOG1496|consensus | 332 | 90.97 | ||
| cd01493 | 425 | APPBP1_RUB Ubiquitin activating enzyme (E1) subuni | 90.95 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 90.87 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 90.8 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 90.62 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 90.57 | |
| PRK07411 | 390 | hypothetical protein; Validated | 90.43 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 90.22 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 90.2 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 90.0 | |
| PRK13535 | 336 | erythrose 4-phosphate dehydrogenase; Provisional | 89.96 | |
| ), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ...." target="_blank" href="http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PF02844">PF02844 | 100 | GARS_N: Phosphoribosylglycinamide synthetase, N do | 89.79 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 89.78 | |
| COG0027 | 394 | PurT Formate-dependent phosphoribosylglycinamide f | 89.75 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 89.57 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 89.43 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 89.35 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 89.28 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 89.05 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 89.05 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 88.9 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 88.86 | |
| PRK12767 | 326 | carbamoyl phosphate synthase-like protein; Provisi | 88.51 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 88.35 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 88.08 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 88.02 | |
| TIGR02130 | 275 | dapB_plant dihydrodipicolinate reductase. This nar | 87.94 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 87.87 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 87.45 | |
| TIGR01408 | 1008 | Ube1 ubiquitin-activating enzyme E1. This model re | 87.29 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 87.19 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 87.15 | |
| PRK06395 | 435 | phosphoribosylamine--glycine ligase; Provisional | 87.12 | |
| PRK08462 | 445 | biotin carboxylase; Validated | 86.96 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 86.71 | |
| TIGR00243 | 389 | Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomeras | 86.29 | |
| PRK05472 | 213 | redox-sensing transcriptional repressor Rex; Provi | 86.28 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 86.18 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 85.34 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 85.33 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 85.01 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 85.0 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 84.97 | |
| PRK08591 | 451 | acetyl-CoA carboxylase biotin carboxylase subunit; | 84.74 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 84.38 | |
| PRK13197 | 215 | pyrrolidone-carboxylate peptidase; Provisional | 84.31 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 84.25 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 84.12 | |
| PRK08955 | 334 | glyceraldehyde-3-phosphate dehydrogenase; Validate | 83.99 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 83.92 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 83.86 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 83.34 | |
| TIGR03693 | 637 | ocin_ThiF_like putative thiazole-containing bacter | 83.24 | |
| TIGR00514 | 449 | accC acetyl-CoA carboxylase, biotin carboxylase su | 83.18 | |
| PF00289 | 110 | CPSase_L_chain: Carbamoyl-phosphate synthase L cha | 83.09 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 83.09 | |
| PRK06111 | 450 | acetyl-CoA carboxylase biotin carboxylase subunit; | 82.85 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 82.83 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 82.44 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 82.38 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 82.33 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 81.89 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 81.79 | |
| PRK12833 | 467 | acetyl-CoA carboxylase biotin carboxylase subunit; | 81.66 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 81.61 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 81.61 | |
| TIGR01532 | 325 | E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas | 81.56 | |
| PRK07178 | 472 | pyruvate carboxylase subunit A; Validated | 81.05 | |
| PRK13195 | 222 | pyrrolidone-carboxylate peptidase; Provisional | 80.53 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 80.47 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 80.09 |
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-48 Score=333.15 Aligned_cols=310 Identities=65% Similarity=1.051 Sum_probs=288.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDF 83 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~ 83 (358)
||||||||++|.+|++|.+.+.+++. ...+|.++....+||++.++.+++|+..+|.+|||+|+.+++..++...+.++
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~-~~e~wvf~~skd~DLt~~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF 79 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGF-DDENWVFIGSKDADLTNLADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDF 79 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCC-CCcceEEeccccccccchHHHHHHHhccCCceeeehHhhhcchhhcCCCchHH
Confidence 46899999999999999999999987 77889999999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEE
Q psy7590 84 FRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYT 163 (358)
Q Consensus 84 ~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 163 (358)
++.|+....|++..|.+.|++++|++.|+++|++..+.|++|+..+.+|++|++..|+.+|++..-..+.|..++|.+++
T Consensus 80 ~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~t 159 (315)
T KOG1431|consen 80 IRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYT 159 (315)
T ss_pred HhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCc-eEE
Q psy7590 164 SVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGD-EFK 242 (358)
Q Consensus 164 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~ 242 (358)
++.|+++|||.++++++.++++|.++.++-.+... |. ++.
T Consensus 160 sviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~---------------------------------------gtd~~~ 200 (315)
T KOG1431|consen 160 SVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRN---------------------------------------GTDELT 200 (315)
T ss_pred eeccccccCCCCCCCcccccchHHHHHHHHHHHhc---------------------------------------CCceEE
Confidence 99999999999999999999999999999877665 44 899
Q ss_pred EcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCC--cccHHHHHHHHHHHhCCCcceeecCCCCCCcccccc
Q psy7590 243 VLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKD--EVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTA 320 (358)
Q Consensus 243 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~--~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~ 320 (358)
++|.|.+.|+|+|++|+|+++++++++....+. ++++.++ .+|++|+++++.++++...++.+...+.+.......
T Consensus 201 VwGsG~PlRqFiys~DLA~l~i~vlr~Y~~vEp--iils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~DGq~kKta 278 (315)
T KOG1431|consen 201 VWGSGSPLRQFIYSDDLADLFIWVLREYEGVEP--IILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSDGQFKKTA 278 (315)
T ss_pred EecCCChHHHHhhHhHHHHHHHHHHHhhcCccc--eEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCCCCccccc
Confidence 999999999999999999999999999877776 5566655 899999999999999999999999888888889999
Q ss_pred chHHHHhhhCCCCc--cccHHHHHHHHHHHHHHhhccccC
Q psy7590 321 SNRKLRELRGPGFE--FTPFQQAVQESVAWFRENHSVARL 358 (358)
Q Consensus 321 ~~~k~~~~l~~G~~--~~~~~~~l~~~~~~~~~~~~~~~~ 358 (358)
|++|++.+ +|. .+++++++.++++||.++.+.+|+
T Consensus 279 snsKL~sl---~pd~~ft~l~~ai~~t~~Wy~~Ny~qark 315 (315)
T KOG1431|consen 279 SNSKLRSL---LPDFKFTPLEQAISETVQWYLDNYEQARK 315 (315)
T ss_pred chHHHHHh---CCCcccChHHHHHHHHHHHHHHhHHhhcC
Confidence 99999997 565 568999999999999998876653
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-47 Score=342.75 Aligned_cols=296 Identities=21% Similarity=0.314 Sum_probs=256.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------CC-CCcee--eecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------DD-ETWIF--VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------~~-~~~~~--~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
|+||||||+||||+|.+.+|++.|+. .+ ..... .+++++|+.|.+.+.+.|+++++|+|||+||...
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~- 79 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASIS- 79 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccc-
Confidence 48999999999999999999999995 11 11111 5778999999999999999999999999999754
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
+.++..+|..+++.|+.+|.+|+++++++++++|||-||+.|||++...|++|+. +..|.+ +||.||++.|++++
T Consensus 80 VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~----~~~p~N-PYG~sKlm~E~iL~ 154 (329)
T COG1087 80 VGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETS----PLAPIN-PYGRSKLMSEEILR 154 (329)
T ss_pred cchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCC----CCCCCC-cchhHHHHHHHHHH
Confidence 3588899999999999999999999999999999999999999999999999999 777888 89999999999999
Q ss_pred HHHhhcCceEEEEecCcccCCCCC------CCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCC
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDN------YNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
.++...+++++++|..++.|.... +..+ .+.+|..+...+ .+
T Consensus 155 d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~-thLip~~~q~A~---G~---------------------------- 202 (329)
T COG1087 155 DAAKANPFKVVILRYFNVAGACPDGTLGQRYPGA-TLLIPVAAEAAL---GK---------------------------- 202 (329)
T ss_pred HHHHhCCCcEEEEEecccccCCCCCccCCCCCCc-chHHHHHHHHHh---cC----------------------------
Confidence 999999999999999999997643 2222 456665544332 11
Q ss_pred cccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhcCCCCC-ceEEccCCCcccHHHHHHHHHHHh
Q psy7590 227 PFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREYDSVEP-IILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 227 ~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~-~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
...+.++| +|...||||||.|+|++++.+++....++. .+||+++|.-.|..|+++.+.++.
T Consensus 203 -----------r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vt 271 (329)
T COG1087 203 -----------RDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVT 271 (329)
T ss_pred -----------CceeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHh
Confidence 22355555 466789999999999999999998655443 699999999999999999999999
Q ss_pred CCCcceeecCCCCCCccccccchHHHHhhhCCCCccc--cHHHHHHHHHHHHHH
Q psy7590 300 QFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT--PFQQAVQESVAWFRE 351 (358)
Q Consensus 300 g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~--~~~~~l~~~~~~~~~ 351 (358)
|.+++....+.++++......|++|+++.| ||+|+ +++++++++..|...
T Consensus 272 g~~ip~~~~~RR~GDpa~l~Ad~~kA~~~L--gw~p~~~~L~~ii~~aw~W~~~ 323 (329)
T COG1087 272 GRDIPVEIAPRRAGDPAILVADSSKARQIL--GWQPTYDDLEDIIKDAWDWHQQ 323 (329)
T ss_pred CCcCceeeCCCCCCCCceeEeCHHHHHHHh--CCCcccCCHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999 99954 899999999999884
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-47 Score=337.55 Aligned_cols=293 Identities=24% Similarity=0.337 Sum_probs=260.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------------------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------------------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
|++|||||.||||++.+++++++..+ .-.......++.+|+.|.+.+.+++.++++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 48999999999999999999988652 11112234556999999999999999888999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeeccceecCCCCC--CCccccccCCCCCCCCcchHH
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLSTCIFPDKTTY--PIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~~vy~~~~~~--~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
+||-.+ +..+...|..+.+.|+.||.+||+++++...+ ||+++||..|||+-... ..+|++ |..|++ +|+.
T Consensus 81 fAAESH-VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~t----p~~PsS-PYSA 154 (340)
T COG1088 81 FAAESH-VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETT----PYNPSS-PYSA 154 (340)
T ss_pred echhcc-ccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCC----CCCCCC-Ccch
Confidence 999876 46788999999999999999999999999864 89999999999987543 688999 888888 8999
Q ss_pred HHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCc
Q psy7590 143 AKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
||+.++.+++.|.+.+|++++|.|+++-|||...+. .+||.++...+.
T Consensus 155 SKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE----KlIP~~I~nal~---------------------------- 202 (340)
T COG1088 155 SKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE----KLIPLMIINALL---------------------------- 202 (340)
T ss_pred hhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch----hhhHHHHHHHHc----------------------------
Confidence 999999999999999999999999999999998764 567777666554
Q ss_pred cCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCC
Q psy7590 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFK 302 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~ 302 (358)
|++++++|+|.+.|||+||.|-++|+..++.+...+ ++||++++...+.-|+++.|++.+|+.
T Consensus 203 ---------------g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~G--E~YNIgg~~E~~Nlevv~~i~~~l~~~ 265 (340)
T COG1088 203 ---------------GKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKIG--ETYNIGGGNERTNLEVVKTICELLGKD 265 (340)
T ss_pred ---------------CCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcCC--ceEEeCCCccchHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999986553 489999999999999999999999998
Q ss_pred cc-----eeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 303 GR-----ITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 303 ~~-----i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.+ +++...+++-...+..|.+|++++| ||.|. +||++|+++++||.+++.
T Consensus 266 ~~~~~~li~~V~DRpGHD~RYaid~~Ki~~eL--gW~P~~~fe~GlrkTv~WY~~N~~ 321 (340)
T COG1088 266 KPDYRDLITFVEDRPGHDRRYAIDASKIKREL--GWRPQETFETGLRKTVDWYLDNEW 321 (340)
T ss_pred ccchhhheEeccCCCCCccceeechHHHhhhc--CCCcCCCHHHHHHHHHHHHHhchH
Confidence 77 8899999988888999999999999 99976 999999999999998764
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=352.88 Aligned_cols=299 Identities=18% Similarity=0.238 Sum_probs=241.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------------CceeeecccccCCCHHHHHHHHhccCC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------------TWIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------------~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
++|+|||||||||||++|+++|+++|++ ... .+..+.++.+|++|.+.+.++++ ++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--~~ 91 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--NV 91 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--CC
Confidence 4579999999999999999999999873 000 01235567899999999999998 59
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
|+|||+|+.... .....++....++|+.++.+|+++|++.++++|||+||++|||.....+..|++ +..|.+ +|
T Consensus 92 d~ViHlAa~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~----~~~p~~-~Y 165 (348)
T PRK15181 92 DYVLHQAALGSV-PRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEER----IGRPLS-PY 165 (348)
T ss_pred CEEEECccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCC----CCCCCC-hh
Confidence 999999997542 234467778899999999999999999999999999999999976566677776 566766 79
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
+.+|.++|.++..+.++++++++++||+++|||+..+......+++.++..++ .
T Consensus 166 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~----~---------------------- 219 (348)
T PRK15181 166 AVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLL----K---------------------- 219 (348)
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHH----c----------------------
Confidence 99999999999999888899999999999999987644323345666665543 3
Q ss_pred CccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 221 DKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
|+++.+++++.+.++|+|++|+|++++.++.+... ..+++||+++++.+|+.|+++.+.+.+
T Consensus 220 -----------------~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~ 282 (348)
T PRK15181 220 -----------------DEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGL 282 (348)
T ss_pred -----------------CCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHh
Confidence 77888889999999999999999999988765322 233589999999999999999999998
Q ss_pred CCC------cceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 300 QFK------GRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 300 g~~------~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+.. ..+.+.+.+........+|++|+++.| ||+|+ +++|+|+++++|++.++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--Gw~P~~sl~egl~~~~~w~~~~~~ 342 (348)
T PRK15181 283 NLWRNEQSRAEPIYKDFRDGDVKHSQADITKIKTFL--SYEPEFDIKEGLKQTLKWYIDKHS 342 (348)
T ss_pred CcccccccCCCcccCCCCCCcccccccCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHhcc
Confidence 732 122223333333445678999999999 99977 999999999999988765
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=325.54 Aligned_cols=301 Identities=38% Similarity=0.617 Sum_probs=243.9
Q ss_pred EEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHH
Q psy7590 8 LVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVN 87 (358)
Q Consensus 8 lItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n 87 (358)
||||||||||++|++.|++.|+. .........+|+++.+++.++++..++|+|||||+..+.......++..+++.|
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~---v~~~~~~~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n 77 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFT---NLVLRTHKELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIREN 77 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCc---EEEeeccccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHH
Confidence 69999999999999999998863 122233457999999999999998789999999997542222345677889999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEec
Q psy7590 88 MKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIP 167 (358)
Q Consensus 88 v~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp 167 (358)
+.++.+|+++|++.++++|||+||+.||+.....+++|+++...+..|.+..|+.+|..+|++++.+.+..+++++++||
T Consensus 78 ~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~ 157 (306)
T PLN02725 78 LQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMP 157 (306)
T ss_pred hHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 99999999999999999999999999999776778999875444555654359999999999999998888999999999
Q ss_pred CcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEE-cCC
Q psy7590 168 CNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKV-LGT 246 (358)
Q Consensus 168 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~ 246 (358)
+++|||........+.+++.++..++..... +.++.+ +++
T Consensus 158 ~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~---------------------------------------~~~~~~~~~~ 198 (306)
T PLN02725 158 TNLYGPHDNFHPENSHVIPALIRRFHEAKAN---------------------------------------GAPEVVVWGS 198 (306)
T ss_pred cceeCCCCCCCCCCCcccHHHHHHHHHHhhc---------------------------------------CCCeEEEcCC
Confidence 9999998654333345667777666554444 666655 788
Q ss_pred CCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHH
Q psy7590 247 GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLR 326 (358)
Q Consensus 247 ~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~ 326 (358)
+.+.++|+|++|++++++.++++.... +.||++++..+|+.|+++.+.+.++.+..+...+.+........+|++|++
T Consensus 199 g~~~~~~i~v~Dv~~~~~~~~~~~~~~--~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 276 (306)
T PLN02725 199 GSPLREFLHVDDLADAVVFLMRRYSGA--EHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTSKPDGTPRKLMDSSKLR 276 (306)
T ss_pred CCeeeccccHHHHHHHHHHHHhccccC--cceEeCCCCcccHHHHHHHHHHHhCCCCceeecCCCCCcccccccCHHHHH
Confidence 888999999999999999999874332 368999999999999999999999987766654444433445678999997
Q ss_pred hhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 327 ELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 327 ~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
. + ||+|+ +++++++++++|++++.+.
T Consensus 277 ~-l--g~~p~~~~~~~l~~~~~~~~~~~~~ 303 (306)
T PLN02725 277 S-L--GWDPKFSLKDGLQETYKWYLENYET 303 (306)
T ss_pred H-h--CCCCCCCHHHHHHHHHHHHHhhhhc
Confidence 5 7 99976 9999999999999988764
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=322.55 Aligned_cols=294 Identities=22% Similarity=0.313 Sum_probs=234.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC---CC---------ceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD---ET---------WIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~---~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
||+|||||||||||++|++.|+++|+. .. .. ...+.++.+|++|++++.+++++.++|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 468999999999999999999999863 00 00 0124567899999999999998767999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhc---------CCCEEEEeeccceecCCC--CCCCccccccCCCCC
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ---------GVKKVVSCLSTCIFPDKT--TYPIDETMVHNGPPH 134 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~---------~v~r~V~~SS~~vy~~~~--~~~~~E~~~~~~~~~ 134 (358)
+|+.... .....++..++++|+.++.+++++|.+. ++++|||+||.++|+... ..+++|+. +..
T Consensus 81 ~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~----~~~ 155 (355)
T PRK10217 81 LAAESHV-DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETT----PYA 155 (355)
T ss_pred CCcccCc-chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCC----CCC
Confidence 9997642 1233567889999999999999999863 467999999999998642 35688887 666
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPG 214 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (358)
|.+ .|+.||..+|.+++.++++.+++++++||+++|||+..+. .+++.++... ..
T Consensus 156 p~s-~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~----~~~~~~~~~~----~~---------------- 210 (355)
T PRK10217 156 PSS-PYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE----KLIPLMILNA----LA---------------- 210 (355)
T ss_pred CCC-hhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc----cHHHHHHHHH----hc----------------
Confidence 666 7999999999999999888899999999999999986432 3444444433 33
Q ss_pred CCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHH
Q psy7590 215 ANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEA 294 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~ 294 (358)
+.++.+++++++.++|+|++|++++++.++++... +++||+++++.+|+.|+++.
T Consensus 211 -----------------------~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~~~--~~~yni~~~~~~s~~~~~~~ 265 (355)
T PRK10217 211 -----------------------GKPLPVYGNGQQIRDWLYVEDHARALYCVATTGKV--GETYNIGGHNERKNLDVVET 265 (355)
T ss_pred -----------------------CCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcCCC--CCeEEeCCCCcccHHHHHHH
Confidence 67788889999999999999999999999987432 35899999999999999999
Q ss_pred HHHHhCCCcc------------eeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 295 IANAFQFKGR------------ITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 295 i~~~~g~~~~------------i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+++.++.... +...+.++.....+..|++|+++.| ||+|. +++++|+++++|++.+.+
T Consensus 266 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--g~~p~~~l~e~l~~~~~~~~~~~~ 336 (355)
T PRK10217 266 ICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIAREL--GWLPQETFESGMRKTVQWYLANES 336 (355)
T ss_pred HHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhc--CCCCcCcHHHHHHHHHHHHHhCHH
Confidence 9999885321 1112222333445678999999999 99965 999999999999988765
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=320.97 Aligned_cols=303 Identities=17% Similarity=0.231 Sum_probs=230.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHc-ccc------CCC------CceeeecccccCC-CHHHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEE-EKR------DDE------TWIFVSSKEADLS-NLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~-g~~------~~~------~~~~~~~~~~Dl~-~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
||+|||||||||||++|+++|++. |++ ... ....++++.+|++ +.+.+.++++ ++|+|||+|+.
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH~aa~ 78 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK--KCDVILPLVAI 78 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc--CCCEEEECccc
Confidence 458999999999999999999986 452 110 1124667789997 7788888887 59999999997
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccC--CC-CCCCCcchHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN--GP-PHPSNFGYSHAKRM 146 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~--~~-~~p~~~~Y~~sK~~ 146 (358)
..+ .....++...++.|+.++.+|+++|++.+ ++|||+||..|||.....+++|+.+.. .+ ..|.+ .|+.+|..
T Consensus 79 ~~~-~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~-~Y~~sK~~ 155 (347)
T PRK11908 79 ATP-ATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRW-IYACSKQL 155 (347)
T ss_pred CCh-HHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccc-hHHHHHHH
Confidence 542 12346778889999999999999999988 699999999999976555677765211 11 13444 79999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCC----CCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCc
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYN----LESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
+|++++.+++..+++++++||+++|||+..+. .....+++.++..+ ..
T Consensus 156 ~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~----~~------------------------ 207 (347)
T PRK11908 156 MDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHI----VR------------------------ 207 (347)
T ss_pred HHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHH----hC------------------------
Confidence 99999999888899999999999999986431 11123444444443 33
Q ss_pred cCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCC-CcccHHHHHHHHHHHhC
Q psy7590 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEK-DEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~-~~~s~~ei~~~i~~~~g 300 (358)
|+++.+++++++.++|+|++|++++++.+++++.. ..+++||++++ ..+|+.|+++.+.+.++
T Consensus 208 ---------------~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~ 272 (347)
T PRK11908 208 ---------------GEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAA 272 (347)
T ss_pred ---------------CCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhc
Confidence 77888888889999999999999999999987532 23458999987 47999999999999998
Q ss_pred CCccee-------ecCCC--------CCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhccc
Q psy7590 301 FKGRIT-------FDTNA--------ADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSVA 356 (358)
Q Consensus 301 ~~~~i~-------~~~~~--------~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~~ 356 (358)
....+. ..... .........|.+|+++.| ||+|+ +++++++++++|++++...+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--Gw~p~~~l~~~l~~~~~~~~~~~~~~ 342 (347)
T PRK11908 273 EYPEYAESAKKVKLVETTSGAYYGKGYQDVQNRVPKIDNTMQEL--GWAPKTTMDDALRRIFEAYRGHVAEA 342 (347)
T ss_pred CcccccccccccccccCCchhccCcCcchhccccCChHHHHHHc--CCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 543321 11100 011224456889999999 99976 99999999999998876544
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=328.91 Aligned_cols=291 Identities=21% Similarity=0.290 Sum_probs=232.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C-CC---C------ceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D-DE---T------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~-~~---~------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.|||||||||||||++|+++|+++|++ . .. . ...++++.+|+.+. .+. ++|+|||||
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~--~~D~ViHlA 192 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILL--EVDQIYHLA 192 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----ccc--CCCEEEECc
Confidence 469999999999999999999999873 0 00 0 01344556777554 233 599999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccC-CCCCCCCcchHHHHHH
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN-GPPHPSNFGYSHAKRM 146 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK~~ 146 (358)
+..++. ....++...++.|+.++.+|+++|++.++ +|||+||.+||++....+.+|+.+.. .+..|.+ .|+.+|..
T Consensus 193 a~~~~~-~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s-~Yg~SK~~ 269 (436)
T PLN02166 193 CPASPV-HYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS-CYDEGKRT 269 (436)
T ss_pred eeccch-hhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCC-chHHHHHH
Confidence 976532 23356788999999999999999999986 89999999999987666788875321 1444555 79999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCC
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
+|+++..+.+..+++++++||+++|||+.... ...+++.++..++ +
T Consensus 270 aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~--~~~~i~~~i~~~l----~---------------------------- 315 (436)
T PLN02166 270 AETLAMDYHRGAGVEVRIARIFNTYGPRMCLD--DGRVVSNFVAQTI----R---------------------------- 315 (436)
T ss_pred HHHHHHHHHHHhCCCeEEEEEccccCCCCCCC--ccchHHHHHHHHh----c----------------------------
Confidence 99999999888899999999999999986432 1234455554443 3
Q ss_pred cccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCccee
Q psy7590 227 PFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 227 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
++++.+++++++.++|+|++|+++++..++++.. .++||++++..+|+.|+++.+.+.+|.+..+.
T Consensus 316 -----------~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~---~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~ 381 (436)
T PLN02166 316 -----------KQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH---VGPFNLGNPGEFTMLELAEVVKETIDSSATIE 381 (436)
T ss_pred -----------CCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC---CceEEeCCCCcEeHHHHHHHHHHHhCCCCCee
Confidence 7788888999999999999999999999987532 23899999999999999999999999887777
Q ss_pred ecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 307 FDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 307 ~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+.+.+.........|++|++++| ||+|+ +++++|+++++|++++..
T Consensus 382 ~~p~~~~~~~~~~~d~~Ka~~~L--Gw~P~~sl~egl~~~i~~~~~~~~ 428 (436)
T PLN02166 382 FKPNTADDPHKRKPDISKAKELL--NWEPKISLREGLPLMVSDFRNRIL 428 (436)
T ss_pred eCCCCCCCccccccCHHHHHHHc--CCCCCCCHHHHHHHHHHHHHHHhc
Confidence 76655555556678999999999 99975 999999999999987654
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=320.98 Aligned_cols=298 Identities=21% Similarity=0.311 Sum_probs=233.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
.|+|||||||||||++|++.|+++|++ .... ....+++.+|+++.+.+.+++. ++|+|||+|+..++
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih~Aa~~~~ 98 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTK--GVDHVFNLAADMGG 98 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHh--CCCEEEEcccccCC
Confidence 579999999999999999999999973 1110 0123566799999999888887 59999999997643
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCC----CCCccccccCCCCCCCCcchHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT----YPIDETMVHNGPPHPSNFGYSHAKRMLD 148 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~----~~~~E~~~~~~~~~p~~~~Y~~sK~~~E 148 (358)
......++......|+.++.+|+++|++.++++|||+||.++|++... .++.|++.. +..|.+ .|+.+|..+|
T Consensus 99 ~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~--p~~p~s-~Yg~sK~~~E 175 (370)
T PLN02695 99 MGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAW--PAEPQD-AYGLEKLATE 175 (370)
T ss_pred ccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCC--CCCCCC-HHHHHHHHHH
Confidence 222223455677899999999999999999999999999999986532 235555421 445655 8999999999
Q ss_pred HHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcc
Q psy7590 149 VLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPF 228 (358)
Q Consensus 149 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (358)
+++..+..+.|++++++||+++|||+..+......+.+.++..++. .
T Consensus 176 ~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~---~------------------------------ 222 (370)
T PLN02695 176 ELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALT---S------------------------------ 222 (370)
T ss_pred HHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHc---C------------------------------
Confidence 9999998888999999999999999765432222334455554432 1
Q ss_pred cCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeec
Q psy7590 229 SLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFD 308 (358)
Q Consensus 229 ~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~ 308 (358)
+.++.+++++++.++|+|++|++++++.++++.. .++||++++..+|+.|+++.+.+..|.+.++...
T Consensus 223 ---------~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~ 290 (370)
T PLN02695 223 ---------TDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEIALSFENKKLPIKHI 290 (370)
T ss_pred ---------CCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhccC---CCceEecCCCceeHHHHHHHHHHHhCCCCCceec
Confidence 4678888999999999999999999999887642 2479999999999999999999999977666654
Q ss_pred CCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 309 TNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 309 ~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+.+. .......|++|+++.| ||+|+ +++++|+++++|++++..
T Consensus 291 ~~~~-~~~~~~~d~sk~~~~l--gw~p~~~l~e~i~~~~~~~~~~~~ 334 (370)
T PLN02695 291 PGPE-GVRGRNSDNTLIKEKL--GWAPTMRLKDGLRITYFWIKEQIE 334 (370)
T ss_pred CCCC-CccccccCHHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4322 2234568999999999 99976 999999999999988765
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=321.52 Aligned_cols=304 Identities=15% Similarity=0.213 Sum_probs=228.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc------CCC------------CceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR------DDE------------TWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
.|||||||||||||++|++.|+++| ++ ... ....++++.+|++|.+.+.+++. ++|+||
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~--~~d~Vi 91 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK--MADLTI 91 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh--cCCEEE
Confidence 5799999999999999999999984 53 110 01246777999999999999998 599999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCC-------------
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG------------- 131 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~------------- 131 (358)
|||+...+. ....++...+..|+.++.+|+++|++.+ ++|||+||.+|||.....+.+|+.+...
T Consensus 92 HlAa~~~~~-~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~ 169 (386)
T PLN02427 92 NLAAICTPA-DYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESP 169 (386)
T ss_pred EcccccChh-hhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccc
Confidence 999975431 2224555677889999999999999887 7999999999999754334444432100
Q ss_pred ----C-CCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCC---cccchhHHHHHHHHhhhhcCccc
Q psy7590 132 ----P-PHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE---SSHVIPGLIRKLYDTIEKGKDQS 203 (358)
Q Consensus 132 ----~-~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 203 (358)
+ ..|.+ .|+.+|.++|+++..+++.++++++++||++||||....... ....++.++..+...+.+
T Consensus 170 ~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~----- 243 (386)
T PLN02427 170 CIFGSIEKQRW-SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR----- 243 (386)
T ss_pred cccCCCCcccc-chHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhc-----
Confidence 0 12233 799999999999999988889999999999999998542110 112334455545444444
Q ss_pred hhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCC
Q psy7590 204 VFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEK 283 (358)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~ 283 (358)
++++.+++++.+.++|||++|+|++++.+++++....+++||++++
T Consensus 244 ----------------------------------~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~ 289 (386)
T PLN02427 244 ----------------------------------REPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNP 289 (386)
T ss_pred ----------------------------------CCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCC
Confidence 7788888888889999999999999999998754223358999987
Q ss_pred -CcccHHHHHHHHHHHhCCCcc-----ee--ecCC------CCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHH
Q psy7590 284 -DEVTIAEVAEAIANAFQFKGR-----IT--FDTN------AADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAW 348 (358)
Q Consensus 284 -~~~s~~ei~~~i~~~~g~~~~-----i~--~~~~------~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~ 348 (358)
..+++.|+++.+.+.+|.... .. ..+. ...+......|.+|++++| ||+|+ +++++|+++++|
T Consensus 290 ~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--Gw~p~~~l~~gl~~~~~~ 367 (386)
T PLN02427 290 NNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQL--GWNPKTSLWDLLESTLTY 367 (386)
T ss_pred CCCccHHHHHHHHHHHhccccccccccccccccCcccccCccccchhhccCCHHHHHHhc--CCCcCccHHHHHHHHHHH
Confidence 599999999999999984210 11 0111 0122345567999999999 99975 999999999999
Q ss_pred HHHhh
Q psy7590 349 FRENH 353 (358)
Q Consensus 349 ~~~~~ 353 (358)
+++.-
T Consensus 368 ~~~~~ 372 (386)
T PLN02427 368 QHKTY 372 (386)
T ss_pred HHHHH
Confidence 87753
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=325.08 Aligned_cols=289 Identities=21% Similarity=0.296 Sum_probs=229.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----C------CC------CceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----D------DE------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----~------~~------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.|||||||||||||++|+++|+++|++ . .. ....++++.+|+.++. +. ++|+|||||
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~--~~D~ViHlA 191 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LL--EVDQIYHLA 191 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hc--CCCEEEEee
Confidence 479999999999999999999999874 0 00 0113455567776653 33 599999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccC-CCCCCCCcchHHHHHH
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN-GPPHPSNFGYSHAKRM 146 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK~~ 146 (358)
+...+. ....++...++.|+.++.+|+++|++.++ +|||+||.+||++....+.+|+.+.. .+..+.+ .|+.+|..
T Consensus 192 a~~~~~-~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s-~Y~~SK~~ 268 (442)
T PLN02206 192 CPASPV-HYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRS-CYDEGKRT 268 (442)
T ss_pred eecchh-hhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccc-hHHHHHHH
Confidence 976532 22356788999999999999999999997 89999999999977666777775321 1333444 79999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCC
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
+|+++..+.+.++++++++||+++|||..... ...+++.++..+ ..
T Consensus 269 aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~--~~~~v~~~i~~~----l~---------------------------- 314 (442)
T PLN02206 269 AETLTMDYHRGANVEVRIARIFNTYGPRMCID--DGRVVSNFVAQA----LR---------------------------- 314 (442)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCcc--ccchHHHHHHHH----Hc----------------------------
Confidence 99999999888899999999999999975422 123444444433 33
Q ss_pred cccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCccee
Q psy7590 227 PFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 227 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
++++.+++++++.++|+|++|+|++++.++++.. .++||+++++.+|+.|+++.+.+.+|.+..+.
T Consensus 315 -----------~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~---~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~ 380 (442)
T PLN02206 315 -----------KEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH---VGPFNLGNPGEFTMLELAKVVQETIDPNAKIE 380 (442)
T ss_pred -----------CCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCCCcee
Confidence 7788888999999999999999999999987642 23899999999999999999999999877777
Q ss_pred ecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHh
Q psy7590 307 FDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFREN 352 (358)
Q Consensus 307 ~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~ 352 (358)
+.+.+.........|++|++++| ||+|+ +++|+|+++++|+++.
T Consensus 381 ~~p~~~~~~~~~~~d~sKa~~~L--Gw~P~~~l~egl~~~~~~~~~~ 425 (442)
T PLN02206 381 FRPNTEDDPHKRKPDITKAKELL--GWEPKVSLRQGLPLMVKDFRQR 425 (442)
T ss_pred eCCCCCCCccccccCHHHHHHHc--CCCCCCCHHHHHHHHHHHHHHh
Confidence 66655444556778999999999 99976 9999999999999764
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=325.32 Aligned_cols=304 Identities=16% Similarity=0.160 Sum_probs=228.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----C--CC---C-------------------------ceeeecccccCCCHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----D--DE---T-------------------------WIFVSSKEADLSNLE 49 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----~--~~---~-------------------------~~~~~~~~~Dl~~~~ 49 (358)
+|+||||||+||||++|+++|+++|++ . .. . ...++++.+|++|++
T Consensus 47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~ 126 (442)
T PLN02572 47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFE 126 (442)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHH
Confidence 579999999999999999999999873 0 00 0 013567789999999
Q ss_pred HHHHHHhccCCcEEEEcccccCCccccccc---hhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeeccceecCCCCCCCcc
Q psy7590 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSH---NLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLSTCIFPDKTTYPIDE 125 (358)
Q Consensus 50 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~~vy~~~~~~~~~E 125 (358)
.+.++++..++|+|||+|+..+.. ....+ ....++.|+.++.+++++|++.+++ +|||+||.+|||... .+++|
T Consensus 127 ~v~~~l~~~~~D~ViHlAa~~~~~-~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~~~E 204 (442)
T PLN02572 127 FLSEAFKSFEPDAVVHFGEQRSAP-YSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-IDIEE 204 (442)
T ss_pred HHHHHHHhCCCCEEEECCCcccCh-hhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CCCcc
Confidence 999999977799999999864421 22222 3456789999999999999999986 899999999999642 23333
Q ss_pred ccc----------cCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCc---------ccchh
Q psy7590 126 TMV----------HNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLES---------SHVIP 186 (358)
Q Consensus 126 ~~~----------~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~---------~~~~~ 186 (358)
... ...+..|.+ +|+.+|..+|.+++.+++.+|++++++||++||||+....... .....
T Consensus 205 ~~i~~~~~~~e~~~~~~~~P~s-~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~ 283 (442)
T PLN02572 205 GYITITHNGRTDTLPYPKQASS-FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFG 283 (442)
T ss_pred cccccccccccccccCCCCCCC-cchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchh
Confidence 210 001455656 7999999999999999999999999999999999986431000 00001
Q ss_pred HHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHH
Q psy7590 187 GLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWV 266 (358)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 266 (358)
.++..++..+.+ |+++.+++++.+.|+|+||+|+|++++.+
T Consensus 284 ~~i~~~~~~~~~---------------------------------------g~~i~v~g~G~~~Rdfi~V~Dva~a~~~a 324 (442)
T PLN02572 284 TALNRFCVQAAV---------------------------------------GHPLTVYGKGGQTRGFLDIRDTVRCIEIA 324 (442)
T ss_pred hHHHHHHHHHhc---------------------------------------CCCceecCCCCEEECeEEHHHHHHHHHHH
Confidence 223333333333 77888899999999999999999999999
Q ss_pred HHhcCC-CCCceEEccCCCcccHHHHHHHHHHH---hCCCcceeecCCCCC--CccccccchHHHHhhhCCCCccc----
Q psy7590 267 LREYDS-VEPIILSVDEKDEVTIAEVAEAIANA---FQFKGRITFDTNAAD--GQLKKTASNRKLRELRGPGFEFT---- 336 (358)
Q Consensus 267 ~~~~~~-~~~~v~n~~~~~~~s~~ei~~~i~~~---~g~~~~i~~~~~~~~--~~~~~~~~~~k~~~~l~~G~~~~---- 336 (358)
+++... +...+||+++ ..+|+.|+++.+.+. +|.+.++...+.+.. .......|.+|+++ | ||+|+
T Consensus 325 l~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~-L--Gw~p~~~~~ 400 (442)
T PLN02572 325 IANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGEKLGLDVEVISVPNPRVEAEEHYYNAKHTKLCE-L--GLEPHLLSD 400 (442)
T ss_pred HhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHHhhCCCCCeeeCCCCcccccccccCccHHHHHH-c--CCCCCCcHH
Confidence 986432 2235899986 679999999999999 887776665543322 22345678999986 8 99976
Q ss_pred cHHHHHHHHHHHHHHhh
Q psy7590 337 PFQQAVQESVAWFRENH 353 (358)
Q Consensus 337 ~~~~~l~~~~~~~~~~~ 353 (358)
++++++.+++.||+++-
T Consensus 401 ~l~~~l~~~~~~~~~~~ 417 (442)
T PLN02572 401 SLLDSLLNFAVKYKDRV 417 (442)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 78999999999998553
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=315.14 Aligned_cols=292 Identities=18% Similarity=0.146 Sum_probs=231.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-----C------------ceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----T------------WIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----~------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
|+||||||+||||++|+++|+++|++ ... . ...+.++.+|++|.+++.++++..++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 48999999999999999999999984 111 0 013567789999999999999977799
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC---EEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK---KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~---r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|||+|+..+. .....++....++|+.++.+|+++|++.+++ +|||+||.++||.....+.+|+. +..|.+
T Consensus 81 ~ViH~Aa~~~~-~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~----~~~p~~- 154 (343)
T TIGR01472 81 EIYNLAAQSHV-KVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETT----PFYPRS- 154 (343)
T ss_pred EEEECCccccc-chhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCC----CCCCCC-
Confidence 99999997542 2233456778889999999999999998863 89999999999976666788887 667776
Q ss_pred chHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSF 218 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (358)
+|+.||..+|.+++.++++.++++++.|+.++|||.... .+++..+..++..+..
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~-----~~~~~~~~~~~~~~~~-------------------- 209 (343)
T TIGR01472 155 PYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGE-----NFVTRKITRAAAKIKL-------------------- 209 (343)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCc-----cccchHHHHHHHHHHc--------------------
Confidence 799999999999999988889999999999999997432 1222333333333333
Q ss_pred CCCccCCCcccCCccccCCCc-eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHH
Q psy7590 219 GLDKLDLIPFSLFPFCFTGGD-EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIAN 297 (358)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~ 297 (358)
|+ ...+++++.+.++|+|++|+|++++.++++.. . ++||+++++.+|+.|+++.+.+
T Consensus 210 -------------------~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~--~-~~yni~~g~~~s~~e~~~~i~~ 267 (343)
T TIGR01472 210 -------------------GLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK--P-DDYVIATGETHSVREFVEVSFE 267 (343)
T ss_pred -------------------CCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC--C-ccEEecCCCceeHHHHHHHHHH
Confidence 44 34456888999999999999999999998643 2 3799999999999999999999
Q ss_pred HhCCCcce-------------------eecC--CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHH
Q psy7590 298 AFQFKGRI-------------------TFDT--NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRE 351 (358)
Q Consensus 298 ~~g~~~~i-------------------~~~~--~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~ 351 (358)
.+|++..+ .+.. .++........|++|++++| ||+|+ +++++|+++++||++
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--gw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 268 YIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDATKAKEKL--GWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred HcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHHHHHHhh--CCCCCCCHHHHHHHHHHHHHh
Confidence 99975431 1111 13333445567999999999 99987 999999999999984
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=308.43 Aligned_cols=308 Identities=20% Similarity=0.266 Sum_probs=236.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc----C--C--C-------------CceeeecccccCCCHHHHHHHHhccCC
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR----D--D--E-------------TWIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~----~--~--~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
|++++|||||||||+|++|+++|+++|+. . . . ....+.++.+|+++++.+.++++..++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 82 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF 82 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence 34579999999999999999999999873 0 0 0 011355678999999999999986679
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
|+|||+|+.... .....++...++.|+.++.+++++|++.++++|||+||.++|+.....+++|++ +..|.+ .|
T Consensus 83 d~vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~----~~~~~~-~Y 156 (352)
T PLN02240 83 DAVIHFAGLKAV-GESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEF----PLSATN-PY 156 (352)
T ss_pred CEEEEccccCCc-cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCC----CCCCCC-HH
Confidence 999999997532 233456778999999999999999999999999999999999876667899998 666766 79
Q ss_pred HHHHHHHHHHHHHHHhh-cCceEEEEecCcccCCCCCCCC--CcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQ-HGVTYTSVIPCNVFGPHDNYNL--ESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANS 217 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (358)
+.+|..+|.+++.++.. .+++++++|++++||++..... ....+...++. ++..+..++
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~----------------- 218 (352)
T PLN02240 157 GRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMP-YVQQVAVGR----------------- 218 (352)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHH-HHHHHHhCC-----------------
Confidence 99999999999988654 5789999999999998542110 00011111111 122222200
Q ss_pred CCCCccCCCcccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhc---CCCCCceEEccCCCcccH
Q psy7590 218 FGLDKLDLIPFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREY---DSVEPIILSVDEKDEVTI 288 (358)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~~v~n~~~~~~~s~ 288 (358)
...+.+++ ++.+.++|+|++|+|++++.++++. ....+++||+++++++|+
T Consensus 219 --------------------~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~ 278 (352)
T PLN02240 219 --------------------RPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSV 278 (352)
T ss_pred --------------------CCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeH
Confidence 22445554 6788899999999999999888753 122335899999999999
Q ss_pred HHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 289 AEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 289 ~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
.|+++.+.+.+|.+.++...+.+.........|++|++++| ||+|+ +++++|+++++|++++...
T Consensus 279 ~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--g~~p~~~l~~~l~~~~~~~~~~~~~ 344 (352)
T PLN02240 279 LEMVAAFEKASGKKIPLKLAPRRPGDAEEVYASTEKAEKEL--GWKAKYGIDEMCRDQWNWASKNPYG 344 (352)
T ss_pred HHHHHHHHHHhCCCCCceeCCCCCCChhhhhcCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHhCccc
Confidence 99999999999988777766554444455567999999999 99977 9999999999999987654
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=310.87 Aligned_cols=293 Identities=20% Similarity=0.298 Sum_probs=229.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----CC----CC---------ceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----DD----ET---------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~~----~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|||||||||||||++|+++|+++|+. .. .. ...++++.+|++|.+++.++++..++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 48999999999999999999998852 00 00 01244578999999999999987679999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhc---------CCCEEEEeeccceecCCC---------C-CCCcccc
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ---------GVKKVVSCLSTCIFPDKT---------T-YPIDETM 127 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~---------~v~r~V~~SS~~vy~~~~---------~-~~~~E~~ 127 (358)
|+.... .....++..++++|+.++.+++++|++. ++++|||+||.++|+... . .+++|++
T Consensus 81 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 81 AAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 997542 1233567889999999999999999874 467999999999998531 1 2367776
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhc
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (358)
+..|.+ .|+.+|..+|.+++.+++.+|++++++|+++||||..... .+++.++.. +..
T Consensus 160 ----~~~p~~-~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~----~~~~~~~~~----~~~--------- 217 (352)
T PRK10084 160 ----AYAPSS-PYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE----KLIPLVILN----ALE--------- 217 (352)
T ss_pred ----CCCCCC-hhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc----chHHHHHHH----Hhc---------
Confidence 667777 7999999999999999888899999999999999985321 234444333 333
Q ss_pred ccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCccc
Q psy7590 208 RARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVT 287 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s 287 (358)
+.++.+++++++.++|+|++|+|++++.++++... +++||+++++.++
T Consensus 218 ------------------------------~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~~--~~~yni~~~~~~s 265 (352)
T PRK10084 218 ------------------------------GKPLPIYGKGDQIRDWLYVEDHARALYKVVTEGKA--GETYNIGGHNEKK 265 (352)
T ss_pred ------------------------------CCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcCCC--CceEEeCCCCcCc
Confidence 66778888899999999999999999999886432 3589999999999
Q ss_pred HHHHHHHHHHHhCCCcce--------eecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 288 IAEVAEAIANAFQFKGRI--------TFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 288 ~~ei~~~i~~~~g~~~~i--------~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+.|+++.+++.+|...+. ...+.++.......+|++|+++.| ||+|+ +++++|+++++|++++..
T Consensus 266 ~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--g~~p~~~l~~~l~~~~~~~~~~~~ 339 (352)
T PRK10084 266 NLDVVLTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDASKISREL--GWKPQETFESGIRKTVEWYLANTE 339 (352)
T ss_pred HHHHHHHHHHHhccccccccchhhhccccccCCCCCceeeeCHHHHHHHc--CCCCcCCHHHHHHHHHHHHHhCHH
Confidence 999999999999853221 111222223344568999999999 99975 999999999999987543
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=292.98 Aligned_cols=292 Identities=23% Similarity=0.330 Sum_probs=244.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----------------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----------------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.++|+||||.||||+||++.|+.+|+. .......++.+.-|+ ...++. .+|.|+|+|
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv-----~~pl~~--evD~IyhLA 99 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDV-----VEPLLK--EVDQIYHLA 99 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeec-----hhHHHH--Hhhhhhhhc
Confidence 469999999999999999999999983 000111122223344 344677 499999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCC-CCCCCCcchHHHHHH
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG-PPHPSNFGYSHAKRM 146 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~-~~~p~~~~Y~~sK~~ 146 (358)
++.++. .-..+|-..++.|+.++.+++..|++.+ +||+++||++|||++...|..|+.|..- +..|.. .|...|..
T Consensus 100 apasp~-~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~-cydegKr~ 176 (350)
T KOG1429|consen 100 APASPP-HYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRS-CYDEGKRV 176 (350)
T ss_pred cCCCCc-ccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchh-hhhHHHHH
Confidence 998865 4447888899999999999999999999 6999999999999988888888887543 444444 89999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCC
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
+|.++..|.++.|+.+.|.|+.+.|||..+... ..+++.|+.+.+ +
T Consensus 177 aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~d--grvvsnf~~q~l----r---------------------------- 222 (350)
T KOG1429|consen 177 AETLCYAYHKQEGIEVRIARIFNTYGPRMHMDD--GRVVSNFIAQAL----R---------------------------- 222 (350)
T ss_pred HHHHHHHhhcccCcEEEEEeeecccCCccccCC--ChhhHHHHHHHh----c----------------------------
Confidence 999999999999999999999999999986543 455555554444 4
Q ss_pred cccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCccee
Q psy7590 227 PFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 227 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
++++.++++|.+.|+|.|++|+.++++.+++++... .+|++++..+|+.|+++++.+..+....+.
T Consensus 223 -----------~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~~---pvNiGnp~e~Tm~elAemv~~~~~~~s~i~ 288 (350)
T KOG1429|consen 223 -----------GEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYRG---PVNIGNPGEFTMLELAEMVKELIGPVSEIE 288 (350)
T ss_pred -----------CCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCcC---CcccCCccceeHHHHHHHHHHHcCCCccee
Confidence 999999999999999999999999999999986554 399999999999999999999998888888
Q ss_pred ecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 307 FDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 307 ~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
+....+++...+..|++++++.| ||+|. +|+|+|+.++.|++++-..
T Consensus 289 ~~~~~~Ddp~kR~pDit~ake~L--gW~Pkv~L~egL~~t~~~fr~~i~~ 336 (350)
T KOG1429|consen 289 FVENGPDDPRKRKPDITKAKEQL--GWEPKVSLREGLPLTVTYFRERIAR 336 (350)
T ss_pred ecCCCCCCccccCccHHHHHHHh--CCCCCCcHHHhhHHHHHHHHHHHHH
Confidence 88777778888899999999999 99977 9999999999999887653
|
|
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=293.36 Aligned_cols=294 Identities=21% Similarity=0.384 Sum_probs=247.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------------------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------------------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
++|+||||+||+|++.+..+.+.-.. .........++.+|+.+...+...+....+|.|||
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 58999999999999999999876431 12223334556999999999999998778999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCc-cccccCCCCCCCCcchHHH
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPID-ETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~-E~~~~~~~~~p~~~~Y~~s 143 (358)
.|+..+. ..+..++..+.+.|+.++..|+++++..| +++|||+||..|||+....... |.+ .+.|.+ +|+.+
T Consensus 87 faa~t~v-d~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s----~~nPtn-pyAas 160 (331)
T KOG0747|consen 87 FAAQTHV-DRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEAS----LLNPTN-PYAAS 160 (331)
T ss_pred hHhhhhh-hhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccc----cCCCCC-chHHH
Confidence 9998763 35567888999999999999999999995 9999999999999998876655 888 889988 89999
Q ss_pred HHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCcc
Q psy7590 144 KRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223 (358)
Q Consensus 144 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
|+++|..++.|.+.++++++++|.++||||++.+. ..+|.|+ ....+
T Consensus 161 KaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~----klipkFi----~l~~~------------------------- 207 (331)
T KOG0747|consen 161 KAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE----KLIPKFI----KLAMR------------------------- 207 (331)
T ss_pred HHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH----HHhHHHH----HHHHh-------------------------
Confidence 99999999999999999999999999999998653 3445444 33344
Q ss_pred CCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCC-
Q psy7590 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFK- 302 (358)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~- 302 (358)
+++..+.+++.+.++|+||+|++.++..++++. +. ++|||+++.+.++..|+++.+.+.+.+.
T Consensus 208 --------------~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg-~~-geIYNIgtd~e~~~~~l~k~i~eli~~~~ 271 (331)
T KOG0747|consen 208 --------------GKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKG-EL-GEIYNIGTDDEMRVIDLAKDICELFEKRL 271 (331)
T ss_pred --------------CCCcceecCcccceeeEeHHHHHHHHHHHHhcC-Cc-cceeeccCcchhhHHHHHHHHHHHHHHhc
Confidence 888899999999999999999999999999983 32 3599999999999999999999998762
Q ss_pred ------cceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhccc
Q psy7590 303 ------GRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSVA 356 (358)
Q Consensus 303 ------~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~~ 356 (358)
.-+.+.+.++.......++.+|++ .| ||+|+ +|+++|+.+++|+.++.+..
T Consensus 272 ~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik-~L--Gw~~~~p~~eGLrktie~y~~~~~~v 329 (331)
T KOG0747|consen 272 PNIDTEPFIFFVEDRPYNDLRYFLDDEKIK-KL--GWRPTTPWEEGLRKTIEWYTKNFKDV 329 (331)
T ss_pred cCCCCCCcceecCCCCcccccccccHHHHH-hc--CCcccCcHHHHHHHHHHHHHhhhccc
Confidence 234456677777777899999999 56 99965 99999999999999887543
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=307.97 Aligned_cols=295 Identities=20% Similarity=0.176 Sum_probs=236.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----Cc-----------eeeecccccCCCHHHHHHHHhccCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----TW-----------IFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----~~-----------~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
+|+||||||+||||++|+++|+++|++ ... .. ..++++.+|++|.+++.++++..++|
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 85 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKPD 85 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCCC
Confidence 578999999999999999999999974 111 01 12556789999999999999877799
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-----EEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-----KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-----r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
+|||+|+.... .....++...+++|+.++.+|+++|...+++ +|||+||.++||.... +++|++ +..|.
T Consensus 86 ~Vih~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~----~~~p~ 159 (340)
T PLN02653 86 EVYNLAAQSHV-AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETT----PFHPR 159 (340)
T ss_pred EEEECCcccch-hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCC----CCCCC
Confidence 99999997542 1233566777899999999999999998875 8999999999997654 788888 77777
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
+ .|+.||..+|.+++.++.++++.++..|+.++|||+... .+++.++..++..+..
T Consensus 160 ~-~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~-----~~~~~~~~~~~~~~~~------------------ 215 (340)
T PLN02653 160 S-PYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGE-----NFVTRKITRAVGRIKV------------------ 215 (340)
T ss_pred C-hhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCc-----ccchhHHHHHHHHHHc------------------
Confidence 6 799999999999999988889999999999999997432 2344455555544444
Q ss_pred CCCCCccCCCcccCCccccCCCceEE-EcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFK-VLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAI 295 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i 295 (358)
+.++. +.+++++.++|+|++|+|++++.++++.. + ++||+++++.+|+.|+++.+
T Consensus 216 ---------------------~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~--~-~~yni~~g~~~s~~e~~~~i 271 (340)
T PLN02653 216 ---------------------GLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQEK--P-DDYVVATEESHTVEEFLEEA 271 (340)
T ss_pred ---------------------CCCCceEeCCCcceecceeHHHHHHHHHHHHhcCC--C-CcEEecCCCceeHHHHHHHH
Confidence 55443 34888999999999999999999998742 2 37999999999999999999
Q ss_pred HHHhCCC--cceeecC--CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 296 ANAFQFK--GRITFDT--NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 296 ~~~~g~~--~~i~~~~--~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.+.+|.+ ..+.... .++........|++|++++| ||+|+ +++++|+++++||++.-+
T Consensus 272 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--gw~p~~~l~~gi~~~~~~~~~~~~ 333 (340)
T PLN02653 272 FGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASKAREVL--GWKPKVGFEQLVKMMVDEDLELAK 333 (340)
T ss_pred HHHcCCCCCcceeeCcccCCccccccccCCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHhcC
Confidence 9999964 2233222 23334445678999999999 99977 999999999999886554
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=305.77 Aligned_cols=279 Identities=15% Similarity=0.142 Sum_probs=216.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDF 83 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~ 83 (358)
||||||||+||||++|+++|+++|+- .-.+. ...+.+|++|++.+.+++++.++|+|||||+.... .....++...
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g~V~~~~~~--~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~-~~~~~~~~~~ 77 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLGNLIALDVH--STDYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAV-DKAESEPEFA 77 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccCCEEEeccc--cccccCCCCCHHHHHHHHHhcCCCEEEECCccCCc-chhhcCHHHH
Confidence 48999999999999999999988731 00000 12346899999999999997779999999998653 2344567788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEE
Q psy7590 84 FRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYT 163 (358)
Q Consensus 84 ~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 163 (358)
+++|+.++.+|+++|++.++ +|||+||.+||+.....|++|++ ++.|.+ .|+.+|..+|+++..+. .+++
T Consensus 78 ~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~----~~~P~~-~Yg~sK~~~E~~~~~~~----~~~~ 147 (299)
T PRK09987 78 QLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETD----ATAPLN-VYGETKLAGEKALQEHC----AKHL 147 (299)
T ss_pred HHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCC----CCCCCC-HHHHHHHHHHHHHHHhC----CCEE
Confidence 89999999999999999997 79999999999887667899998 778877 79999999999997763 3579
Q ss_pred EEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEE
Q psy7590 164 SVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKV 243 (358)
Q Consensus 164 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (358)
++|++++|||... . ++..+++.+.+ ++++.+
T Consensus 148 ilR~~~vyGp~~~------~----~~~~~~~~~~~---------------------------------------~~~~~v 178 (299)
T PRK09987 148 IFRTSWVYAGKGN------N----FAKTMLRLAKE---------------------------------------REELSV 178 (299)
T ss_pred EEecceecCCCCC------C----HHHHHHHHHhc---------------------------------------CCCeEE
Confidence 9999999999643 2 33334444444 778888
Q ss_pred cCC--CCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh---CCCc---ceeecC-----C
Q psy7590 244 LGT--GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF---QFKG---RITFDT-----N 310 (358)
Q Consensus 244 ~~~--~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~---g~~~---~i~~~~-----~ 310 (358)
+++ +.+.+++.+++|++.++..++.+... . ++||+++++.+|+.|+++.+.+.+ |.+. .+...+ .
T Consensus 179 ~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~-~-giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~ 256 (299)
T PRK09987 179 INDQFGAPTGAELLADCTAHAIRVALNKPEV-A-GLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPT 256 (299)
T ss_pred eCCCcCCCCCHHHHHHHHHHHHHHhhccCCC-C-CeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCC
Confidence 877 56656666778888888877765322 2 389999999999999999998864 4332 122222 2
Q ss_pred CCCCccccccchHHHHhhhCCCCccccHHHHHHHHHHHH
Q psy7590 311 AADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWF 349 (358)
Q Consensus 311 ~~~~~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~ 349 (358)
+........+|++|+++.| ||++++|+++|+++++.+
T Consensus 257 ~~~rp~~~~ld~~k~~~~l--g~~~~~~~~~l~~~~~~~ 293 (299)
T PRK09987 257 PARRPHNSRLNTEKFQQNF--ALVLPDWQVGVKRMLTEL 293 (299)
T ss_pred CCCCCCcccCCHHHHHHHh--CCCCccHHHHHHHHHHHH
Confidence 2223445678999999999 999889999999999765
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=331.61 Aligned_cols=293 Identities=19% Similarity=0.344 Sum_probs=233.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc--cc----CC----C---------CceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE--KR----DD----E---------TWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g--~~----~~----~---------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
+|+|||||||||||++|++.|++++ ++ .. . ....++++.+|++|++.+..++...++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 5799999999999999999999874 32 10 0 0124567789999999888877655799999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCC---CccccccCCCCCCCCcch
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYP---IDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~---~~E~~~~~~~~~p~~~~Y 140 (358)
|+|+.... .....++..+++.|+.++.+|+++|++.+ +++|||+||.+|||+....+ .+|++ +..|.+ .|
T Consensus 86 HlAa~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~----~~~p~~-~Y 159 (668)
T PLN02260 86 HFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEAS----QLLPTN-PY 159 (668)
T ss_pred ECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccC----CCCCCC-Cc
Confidence 99998652 12335667889999999999999999987 89999999999999764322 35665 566766 79
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
+.+|..+|.+++.+.+..+++++++||++||||..... .+++.++. ....
T Consensus 160 ~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~----~~i~~~~~----~a~~---------------------- 209 (668)
T PLN02260 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE----KLIPKFIL----LAMQ---------------------- 209 (668)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc----cHHHHHHH----HHhC----------------------
Confidence 99999999999999888899999999999999986432 34444433 3333
Q ss_pred CccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhC
Q psy7590 221 DKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g 300 (358)
|.++.+++++.+.++|+|++|+|+++..++++... +++||+++++.+++.|+++.+++.+|
T Consensus 210 -----------------g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~~--~~vyni~~~~~~s~~el~~~i~~~~g 270 (668)
T PLN02260 210 -----------------GKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEV--GHVYNIGTKKERRVIDVAKDICKLFG 270 (668)
T ss_pred -----------------CCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCCC--CCEEEECCCCeeEHHHHHHHHHHHhC
Confidence 77888889999999999999999999999876433 24899999999999999999999999
Q ss_pred CCcc--eeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 301 FKGR--ITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 301 ~~~~--i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.+.. +...+.++........|++|+++ | ||+|+ +++|+++++++|++++.+
T Consensus 271 ~~~~~~i~~~~~~p~~~~~~~~d~~k~~~-l--Gw~p~~~~~egl~~~i~w~~~~~~ 324 (668)
T PLN02260 271 LDPEKSIKFVENRPFNDQRYFLDDQKLKK-L--GWQERTSWEEGLKKTMEWYTSNPD 324 (668)
T ss_pred CCCcceeeecCCCCCCcceeecCHHHHHH-c--CCCCCCCHHHHHHHHHHHHHhChh
Confidence 7653 33333334344456689999975 7 99965 999999999999998765
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=330.55 Aligned_cols=301 Identities=22% Similarity=0.286 Sum_probs=230.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHc-ccc------CCC------CceeeecccccCCCHHH-HHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEE-EKR------DDE------TWIFVSSKEADLSNLES-TQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~-g~~------~~~------~~~~~~~~~~Dl~~~~~-~~~~~~~~~~d~Vih~a~~ 69 (358)
+|+|||||||||||++|+++|+++ |++ ... ....++++.+|++|... +.++++ ++|+|||+|+.
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViHlAa~ 392 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIK--KCDVVLPLVAI 392 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhc--CCCEEEECccc
Confidence 679999999999999999999986 563 111 11246677899998765 566777 69999999997
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccC--CCC-CCCCcchHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN--GPP-HPSNFGYSHAKRM 146 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~--~~~-~p~~~~Y~~sK~~ 146 (358)
.++. ....++...+++|+.++.+++++|++++ ++|||+||.++||.....+++|+++.. .+. .|.+ .|+.+|.+
T Consensus 393 ~~~~-~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s-~Yg~sK~~ 469 (660)
T PRK08125 393 ATPI-EYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRW-IYSVSKQL 469 (660)
T ss_pred cCch-hhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCcc-chHHHHHH
Confidence 6532 3345677889999999999999999998 799999999999976556788887421 122 2333 79999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCCCC----cccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCc
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE----SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
+|.+++.+++.+|++++++||+++|||+...... ...+++.++..+ ..
T Consensus 470 ~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~----~~------------------------ 521 (660)
T PRK08125 470 LDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNL----VE------------------------ 521 (660)
T ss_pred HHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHh----cC------------------------
Confidence 9999999988889999999999999997643110 123445554443 33
Q ss_pred cCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCC-cccHHHHHHHHHHHhC
Q psy7590 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKD-EVTIAEVAEAIANAFQ 300 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~-~~s~~ei~~~i~~~~g 300 (358)
++++.+++++.+.++|+|++|+|++++.++++... ..+++||+++++ .+|++|+++.+.+.+|
T Consensus 522 ---------------~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g 586 (660)
T PRK08125 522 ---------------GSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFE 586 (660)
T ss_pred ---------------CCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhc
Confidence 77888888999999999999999999999987532 234589999985 7999999999999998
Q ss_pred CCcc-eeecCC--------------CCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 301 FKGR-ITFDTN--------------AADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 301 ~~~~-i~~~~~--------------~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.+.. +..... ..........|++|++++| ||+|. +++++|+++++|+++.-+
T Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~L--Gw~P~~~lee~l~~~i~~~~~~~~ 654 (660)
T PRK08125 587 KHPLRDHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRLL--DWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_pred cCcccccCCccccccccccccccccccccccccCCChHHHHHHh--CCCCCCcHHHHHHHHHHHHHhccc
Confidence 5321 111000 0012223457999999999 99975 999999999999998765
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=300.52 Aligned_cols=297 Identities=21% Similarity=0.249 Sum_probs=231.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
++|+||||||+||||++|++.|+++|++ .... ...+.++.+|+++++++.++++..++|+|||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4579999999999999999999999974 1110 01244568999999999999997779999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCC-CCCCccccccCCCCCCCCcchHHHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKT-TYPIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~-~~~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
|+.... .....++...+++|+.++.+++++|++.+ +++|||+||..+|+... ..+++|+. +..|.+ +|+.+|
T Consensus 83 A~~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~----~~~p~~-~Y~~sK 156 (349)
T TIGR02622 83 AAQPLV-RKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETD----PLGGHD-PYSSSK 156 (349)
T ss_pred Cccccc-ccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCC----CCCCCC-cchhHH
Confidence 996432 23445778899999999999999999887 78999999999998653 24677776 556666 799999
Q ss_pred HHHHHHHHHHHhhc-------CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCC
Q psy7590 145 RMLDVLNKAYYQQH-------GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANS 217 (358)
Q Consensus 145 ~~~E~~~~~~~~~~-------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (358)
..+|.+++.+++.+ +++++++||+++|||++.. ...+++.++..+. .
T Consensus 157 ~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~---~~~~~~~~~~~~~----~------------------- 210 (349)
T TIGR02622 157 ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWA---EDRLIPDVIRAFS----S------------------- 210 (349)
T ss_pred HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcch---hhhhhHHHHHHHh----c-------------------
Confidence 99999999887654 8999999999999997532 1245555554443 3
Q ss_pred CCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcC---CCCCceEEccCC--CcccHHHHH
Q psy7590 218 FGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYD---SVEPIILSVDEK--DEVTIAEVA 292 (358)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~---~~~~~v~n~~~~--~~~s~~ei~ 292 (358)
|+++.+ +++.+.++|+|++|++++++.++++.. ...+++||++++ ..+++.|++
T Consensus 211 --------------------g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~ 269 (349)
T TIGR02622 211 --------------------NKIVII-RNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELV 269 (349)
T ss_pred --------------------CCCeEE-CCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHH
Confidence 667665 468889999999999999998887531 111358999975 689999999
Q ss_pred HHHHHHhC-CCcceeecC--CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 293 EAIANAFQ-FKGRITFDT--NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 293 ~~i~~~~g-~~~~i~~~~--~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+.+.+.++ .+..+...+ .+.........|++|++++| ||+|+ +++++++++++|+++..+
T Consensus 270 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--gw~p~~~l~~gi~~~i~w~~~~~~ 333 (349)
T TIGR02622 270 VDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSKARTLL--GWHPRWGLEEAVSRTVDWYKAWLR 333 (349)
T ss_pred HHHHHHhcCCCCceeeccCCCCCcccceeecCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHhc
Confidence 99998875 334444322 22333445678999999999 99977 999999999999987654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=295.28 Aligned_cols=292 Identities=23% Similarity=0.326 Sum_probs=231.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHcc--cc----CC-------CC------ceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEE--KR----DD-------ET------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g--~~----~~-------~~------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
+||||||||++|++|+++|++.| ++ .. .. ...++++.+|++|++++.++++..++|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 59999999999999999999986 31 00 00 01345678999999999999997679999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeeccceecCCCCC-CCccccccCCCCCCCCcchHHHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLSTCIFPDKTTY-PIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~~vy~~~~~~-~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
|+.... .....++..++++|+.++.+++++|.+.+.+ ++||+||.++|+..... +++|+. +..|.+ .|+.+|
T Consensus 81 a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~----~~~~~~-~Y~~sK 154 (317)
T TIGR01181 81 AAESHV-DRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETT----PLAPSS-PYSASK 154 (317)
T ss_pred ccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCC----CCCCCC-chHHHH
Confidence 997542 1233567788999999999999999997544 89999999999965433 678887 566666 799999
Q ss_pred HHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccC
Q psy7590 145 RMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLD 224 (358)
Q Consensus 145 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
..+|.+++.++.+.+++++++||+++||+...+. .+++.++.. ...
T Consensus 155 ~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~----~~~~~~~~~----~~~-------------------------- 200 (317)
T TIGR01181 155 AASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE----KLIPLMITN----ALA-------------------------- 200 (317)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc----cHHHHHHHH----Hhc--------------------------
Confidence 9999999999888899999999999999975432 344444443 333
Q ss_pred CCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcc
Q psy7590 225 LIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR 304 (358)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~ 304 (358)
+.++.+++++++.++|+|++|+|+++..++++... +++||+++++.+++.|+++.+.+.+|.+..
T Consensus 201 -------------~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~ 265 (317)
T TIGR01181 201 -------------GKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGRV--GETYNIGGGNERTNLEVVETILELLGKDED 265 (317)
T ss_pred -------------CCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCCC--CceEEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence 66777888888899999999999999999976432 348999999999999999999999997543
Q ss_pred e-eecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 305 I-TFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 305 i-~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+ ......+........|++|++++| ||+|. +++++++++++|++++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~k~~~~l--G~~p~~~~~~~i~~~~~~~~~~~~ 315 (317)
T TIGR01181 266 LITHVEDRPGHDRRYAIDASKIKREL--GWAPKYTFEEGLRKTVQWYLDNEW 315 (317)
T ss_pred cccccCCCccchhhhcCCHHHHHHHh--CCCCCCcHHHHHHHHHHHHHhccC
Confidence 2 222222223334468999999999 99975 999999999999988764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-38 Score=298.17 Aligned_cols=305 Identities=16% Similarity=0.235 Sum_probs=231.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C-CCC-----------ceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D-DET-----------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~-~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|+|||||||||||++|++.|+++|++ . ... ...+.++.+|++|++++.+++...++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 48999999999999999999999873 0 000 01234568999999999999986679999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCC-CCCCcchHHHHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP-HPSNFGYSHAKR 145 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~-~p~~~~Y~~sK~ 145 (358)
|+.... ......+...+++|+.++.+|+++|+++++++||++||.++|+.....+++|++ +. .|.. .|+.+|.
T Consensus 81 a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~----~~~~p~~-~Y~~sK~ 154 (338)
T PRK10675 81 AGLKAV-GESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESF----PTGTPQS-PYGKSKL 154 (338)
T ss_pred Cccccc-cchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCcccccc----CCCCCCC-hhHHHHH
Confidence 987542 122345677899999999999999999999999999999999976667788887 44 4555 8999999
Q ss_pred HHHHHHHHHHhhc-CceEEEEecCcccCCCCCCCC-Ccc-cchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCc
Q psy7590 146 MLDVLNKAYYQQH-GVTYTSVIPCNVFGPHDNYNL-ESS-HVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222 (358)
Q Consensus 146 ~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
.+|++++.+++.. +++++++|++++||+...... ... .....++..+...... +
T Consensus 155 ~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~---------------------- 211 (338)
T PRK10675 155 MVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVG-R---------------------- 211 (338)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhc-C----------------------
Confidence 9999999987653 799999999999998532110 000 1111222222221111 0
Q ss_pred cCCCcccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhcC-CCCCceEEccCCCcccHHHHHHHH
Q psy7590 223 LDLIPFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREYD-SVEPIILSVDEKDEVTIAEVAEAI 295 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~v~n~~~~~~~s~~ei~~~i 295 (358)
..++.+++ ++.+.++|+|++|+|++++.++++.. ..++++||+++++.+|+.|+++.+
T Consensus 212 ---------------~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i 276 (338)
T PRK10675 212 ---------------RDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAF 276 (338)
T ss_pred ---------------CCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHH
Confidence 22344443 56778999999999999999998632 222358999999999999999999
Q ss_pred HHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 296 ANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 296 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
.+.+|++.++...+...........|++|+++.+ ||+|. +++++++++++|++++...
T Consensus 277 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~k~~~~l--g~~p~~~~~~~~~~~~~~~~~~~~~ 335 (338)
T PRK10675 277 SKACGKPVNYHFAPRREGDLPAYWADASKADREL--NWRVTRTLDEMAQDTWHWQSRHPQG 335 (338)
T ss_pred HHHhCCCCCeeeCCCCCCchhhhhcCHHHHHHHh--CCCCcCcHHHHHHHHHHHHHhhhhc
Confidence 9999988776655544444455678999999999 99965 9999999999999887553
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=296.50 Aligned_cols=285 Identities=19% Similarity=0.289 Sum_probs=210.1
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------CCCCc-eeeecccccCCCHHHHHH----HHhc---cCCcEEEEcccccCC
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------DDETW-IFVSSKEADLSNLESTQQ----LFSK---YKPTHVIHLAAMVGG 72 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~~~~~-~~~~~~~~Dl~~~~~~~~----~~~~---~~~d~Vih~a~~~~~ 72 (358)
|||||||||||++|+++|++.|+. ..... .......+|+.|..+... ++.. .++|+|||+|+..+.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~ 81 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSST 81 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCC
Confidence 899999999999999999999873 11110 011223456665443322 3221 269999999996542
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
...++...++.|+.++.+|+++|++.++ +|||+||.++|++....+.+|+. +..|.+ .|+.+|..+|++++
T Consensus 82 ---~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E~~~~ 152 (308)
T PRK11150 82 ---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEERE----YEKPLN-VYGYSKFLFDEYVR 152 (308)
T ss_pred ---cCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCC----CCCCCC-HHHHHHHHHHHHHH
Confidence 1234556899999999999999999998 69999999999976555677776 667766 79999999999999
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
.+....+++++++||+++|||+..+. ..++.++..+...+.+
T Consensus 153 ~~~~~~~~~~~~lR~~~vyG~~~~~~----~~~~~~~~~~~~~~~~---------------------------------- 194 (308)
T PRK11150 153 QILPEANSQICGFRYFNVYGPREGHK----GSMASVAFHLNNQLNN---------------------------------- 194 (308)
T ss_pred HHHHHcCCCEEEEeeeeecCCCCCCC----CccchhHHHHHHHHhc----------------------------------
Confidence 99888899999999999999986432 1223333333333333
Q ss_pred cccCCCceEEEc-CCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCC
Q psy7590 233 FCFTGGDEFKVL-GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNA 311 (358)
Q Consensus 233 ~~~~~g~~~~~~-~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~ 311 (358)
|.++.++ ++++..++|+|++|+|++++.++++.. + ++||++++..+|+.|+++.+.+.+|.. ++...+.+
T Consensus 195 -----~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~--~-~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~ 265 (308)
T PRK11150 195 -----GENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV--S-GIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFP 265 (308)
T ss_pred -----CCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC--C-CeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccCc
Confidence 5444344 556678999999999999999988642 2 389999999999999999999999853 23222222
Q ss_pred CC----CccccccchHHHHhhhCCCCcc--ccHHHHHHHHHHHHH
Q psy7590 312 AD----GQLKKTASNRKLRELRGPGFEF--TPFQQAVQESVAWFR 350 (358)
Q Consensus 312 ~~----~~~~~~~~~~k~~~~l~~G~~~--~~~~~~l~~~~~~~~ 350 (358)
.. .......|++|+++ + ||+| ++++++|+++++|+.
T Consensus 266 ~~~~~~~~~~~~~d~~k~~~-~--g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 266 DKLKGRYQAFTQADLTKLRA-A--GYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred cccccccceecccCHHHHHh-c--CCCCCCCCHHHHHHHHHHHhh
Confidence 11 12234689999996 6 9995 399999999999975
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-38 Score=298.90 Aligned_cols=286 Identities=19% Similarity=0.204 Sum_probs=215.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
+|+||||||+||||++|+++|+++|++ .... ...+.++.+|+++++++.+++. ++|+|||
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vih 87 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID--GCDGVFH 87 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh--cCCEEEE
Confidence 468999999999999999999999984 1111 0135567899999999999998 5999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc-ceecCCCC---CCCccccccC--CCCCCCCcc
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST-CIFPDKTT---YPIDETMVHN--GPPHPSNFG 139 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~-~vy~~~~~---~~~~E~~~~~--~~~~p~~~~ 139 (358)
+|+... .++...++.|+.++.+++++|++++++||||+||. ++|+.... .+++|+++.. .+..|.+ .
T Consensus 88 ~A~~~~------~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~-~ 160 (342)
T PLN02214 88 TASPVT------DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKN-W 160 (342)
T ss_pred ecCCCC------CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcccccc-H
Confidence 999642 45778899999999999999999999999999996 68975432 3578876421 1233545 7
Q ss_pred hHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
|+.+|..+|.++..+.++.|++++++||++||||...+.. ...+ ..++... .
T Consensus 161 Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~--~~~~----~~~~~~~-~--------------------- 212 (342)
T PLN02214 161 YCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTI--NASL----YHVLKYL-T--------------------- 212 (342)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCC--CchH----HHHHHHH-c---------------------
Confidence 9999999999999998888999999999999999865321 1111 1122111 1
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
|.... + ++..++|||++|+|++++.+++++..++ .||+++ ...++.|+++.+.+.+
T Consensus 213 ------------------g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~~~~g--~yn~~~-~~~~~~el~~~i~~~~ 268 (342)
T PLN02214 213 ------------------GSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAPSASG--RYLLAE-SARHRGEVVEILAKLF 268 (342)
T ss_pred ------------------CCccc-C--CCCCcCeeEHHHHHHHHHHHHhCcccCC--cEEEec-CCCCHHHHHHHHHHHC
Confidence 32221 2 2346899999999999999998754332 699986 5789999999999999
Q ss_pred CC-CcceeecCCCCCCccccccchHHHHhhhCCCCccccHHHHHHHHHHHHHHhh
Q psy7590 300 QF-KGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENH 353 (358)
Q Consensus 300 g~-~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~~~ 353 (358)
+. +.+...............+|++|+++ | ||+|++++|+|+++++|+++..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-L--G~~p~~lee~i~~~~~~~~~~~ 320 (342)
T PLN02214 269 PEYPLPTKCKDEKNPRAKPYKFTNQKIKD-L--GLEFTSTKQSLYDTVKSLQEKG 320 (342)
T ss_pred CCCCCCCCCccccCCCCCccccCcHHHHH-c--CCcccCHHHHHHHHHHHHHHcC
Confidence 63 22222222222233345689999985 8 9999999999999999998764
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=287.00 Aligned_cols=295 Identities=29% Similarity=0.421 Sum_probs=234.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------CCCCc----eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------DDETW----IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 75 (358)
+|||||||||||++|++.|+++|++ ..... ..+..+.+|+++.+...++....+ |+|||+|+.......
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-d~vih~aa~~~~~~~ 80 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGVEFVVLDLTDRDLVDELAKGVP-DAVIHLAAQSSVPDS 80 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccccccceeeecccchHHHHHHHhcCC-CEEEEccccCchhhh
Confidence 5999999999999999999999884 11111 245667899999988888888522 999999998753211
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCC-CCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHH
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDK-TTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~-~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 154 (358)
...++..+++.|+.++.+++++|++.++++|||.||.++|+.. ...+++|+. .+..|.+ +|+.+|+.+|+.+..+
T Consensus 81 ~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~---~~~~p~~-~Yg~sK~~~E~~~~~~ 156 (314)
T COG0451 81 NASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDL---GPPRPLN-PYGVSKLAAEQLLRAY 156 (314)
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCccccc---CCCCCCC-HHHHHHHHHHHHHHHH
Confidence 1114567999999999999999999999999998888877755 334788883 2777877 7999999999999999
Q ss_pred HhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccc
Q psy7590 155 YQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFC 234 (358)
Q Consensus 155 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (358)
..+.|++++++||++||||++.+. ..+.++..++..+. .
T Consensus 157 ~~~~~~~~~ilR~~~vyGp~~~~~-~~~~~~~~~~~~~~----~------------------------------------ 195 (314)
T COG0451 157 ARLYGLPVVILRPFNVYGPGDKPD-LSSGVVSAFIRQLL----K------------------------------------ 195 (314)
T ss_pred HHHhCCCeEEEeeeeeeCCCCCCC-CCcCcHHHHHHHHH----h------------------------------------
Confidence 988899999999999999998765 22233333333222 2
Q ss_pred cCCCce-EEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCC-cccHHHHHHHHHHHhCCCcc-eeecC--
Q psy7590 235 FTGGDE-FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKD-EVTIAEVAEAIANAFQFKGR-ITFDT-- 309 (358)
Q Consensus 235 ~~~g~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~-~~s~~ei~~~i~~~~g~~~~-i~~~~-- 309 (358)
+.+ +.+.+++...++|+|++|++++++.+++++... +||++++. ..++.|+++.+.+.+|.+.. +...+
T Consensus 196 ---~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~---~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 269 (314)
T COG0451 196 ---GEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG---VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLG 269 (314)
T ss_pred ---CCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc---EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCC
Confidence 554 566677788899999999999999999986555 79999987 89999999999999998766 44443
Q ss_pred CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 310 NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 310 ~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
...........|.+|++..| ||+|. ++++++.+++.|+.....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~l--g~~p~~~~~~~i~~~~~~~~~~~~ 313 (314)
T COG0451 270 RRGDLREGKLLDISKARAAL--GWEPKVSLEEGLADTLEWLLKKLE 313 (314)
T ss_pred CCCcccccccCCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHhhc
Confidence 23334556788999999999 99986 999999999999987653
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=281.61 Aligned_cols=310 Identities=22% Similarity=0.291 Sum_probs=253.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc--------------------CCCCceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR--------------------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~--------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
++||||||.||||+|.+-+|++.|+. .......+.++++|++|.+.++++|+..++|.|+
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~ 82 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM 82 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence 58999999999999999999999994 1122355677899999999999999999999999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCC-CCCcchHHH
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH-PSNFGYSHA 143 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~-p~~~~Y~~s 143 (358)
|+|+... ..++.++|..++..|+.|+.+||+.+++++++.+||.||+.|||.....|++|+. +.. |.+ +|+.+
T Consensus 83 Hfa~~~~-vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~----~t~~p~~-pyg~t 156 (343)
T KOG1371|consen 83 HFAALAA-VGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEED----PTDQPTN-PYGKT 156 (343)
T ss_pred eehhhhc-cchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcC----CCCCCCC-cchhh
Confidence 9999865 4578899999999999999999999999999999999999999999899999999 444 666 89999
Q ss_pred HHHHHHHHHHHHhhcCceEEEEecCcccC--CCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCC
Q psy7590 144 KRMLDVLNKAYYQQHGVTYTSVIPCNVFG--PHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLD 221 (358)
Q Consensus 144 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (358)
|.+.|+++..+....++.++.||.++++| |......+...+-..++..+.+ .. ...+.
T Consensus 157 K~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~--------------va------igr~~ 216 (343)
T KOG1371|consen 157 KKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQ--------------VA------IGRRP 216 (343)
T ss_pred hHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccc--------------hh------hcccc
Confidence 99999999999999899999999999999 4333222211111111110000 00 00000
Q ss_pred ccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccHHHHHHHHHHHhC
Q psy7590 222 KLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~~ei~~~i~~~~g 300 (358)
.+.- -|.++... +++..++++|+-|+|..+..++++... ...++||++++...+..++...++++.|
T Consensus 217 ~l~v-----------~g~d~~t~-dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g 284 (343)
T KOG1371|consen 217 NLQV-----------VGRDYTTI-DGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALG 284 (343)
T ss_pred ccee-----------ecCccccc-CCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhc
Confidence 0111 15555533 558899999999999999999998754 4446999999999999999999999999
Q ss_pred CCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 301 FKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 301 ~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
++.++...+.+.++....+.+.++++++| ||++. ++++++++...|..++..
T Consensus 285 ~~~k~~~v~~R~gdv~~~ya~~~~a~~el--gwk~~~~iee~c~dlw~W~~~np~ 337 (343)
T KOG1371|consen 285 VKIKKKVVPRRNGDVAFVYANPSKAQREL--GWKAKYGLQEMLKDLWRWQKQNPS 337 (343)
T ss_pred CCCCccccCCCCCCceeeeeChHHHHHHh--CCccccCHHHHHHHHHHHHhcCCC
Confidence 99999988888888889999999999999 99965 999999999999988764
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=288.91 Aligned_cols=284 Identities=19% Similarity=0.242 Sum_probs=212.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
.|+|||||||||||++|+++|+++|++ .... ...++++.+|+++++.+..+++ ++|+||
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vi 81 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD--GCEGVF 81 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc--CCCEEE
Confidence 368999999999999999999999974 1110 0134567899999999999998 599999
Q ss_pred EcccccCCccccccchh-hHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccc--eecCC---CCCCCccccccCCCCCCC-
Q psy7590 65 HLAAMVGGLFHNMSHNL-DFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTC--IFPDK---TTYPIDETMVHNGPPHPS- 136 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~-~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~--vy~~~---~~~~~~E~~~~~~~~~p~- 136 (358)
|+|+... ....++. ..+++|+.++.+++++|.+. +++||||+||.+ +|+.. ...+++|+. +..|.
T Consensus 82 h~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~----~~~p~~ 154 (322)
T PLN02662 82 HTASPFY---HDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETW----FSDPAF 154 (322)
T ss_pred EeCCccc---CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCccc----CCChhH
Confidence 9999753 2233443 78899999999999999988 899999999986 46532 224577876 33331
Q ss_pred ----CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCC
Q psy7590 137 ----NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFP 212 (358)
Q Consensus 137 ----~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (358)
...|+.+|..+|++++.+.++++++++++||+++|||...+.. ...+.++..++ .
T Consensus 155 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~---~~~~~~~~~~~----~-------------- 213 (322)
T PLN02662 155 CEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTL---NTSAEAILNLI----N-------------- 213 (322)
T ss_pred hhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCC---CchHHHHHHHh----c--------------
Confidence 1269999999999999998888999999999999999754321 22233333322 1
Q ss_pred CCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHH
Q psy7590 213 PGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVA 292 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~ 292 (358)
|.+. . +.+.++|+|++|+|++++.+++++...+ .||++ +..+++.|++
T Consensus 214 -------------------------~~~~--~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~--~~~~~-g~~~s~~e~~ 261 (322)
T PLN02662 214 -------------------------GAQT--F--PNASYRWVDVRDVANAHIQAFEIPSASG--RYCLV-ERVVHYSEVV 261 (322)
T ss_pred -------------------------CCcc--C--CCCCcCeEEHHHHHHHHHHHhcCcCcCC--cEEEe-CCCCCHHHHH
Confidence 3221 1 2356899999999999999998754432 58886 5789999999
Q ss_pred HHHHHHhCCCcceeec-CCCCCCccccccchHHHHhhhCCCCccccHHHHHHHHHHHHHHhh
Q psy7590 293 EAIANAFQFKGRITFD-TNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENH 353 (358)
Q Consensus 293 ~~i~~~~g~~~~i~~~-~~~~~~~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~~~ 353 (358)
+.+.+.++.. .+... ............|++|+++ | ||++++++++|+++++|++++.
T Consensus 262 ~~i~~~~~~~-~~~~~~~~~~~~~~~~~~d~~k~~~-l--g~~~~~~~~~l~~~~~~~~~~~ 319 (322)
T PLN02662 262 KILHELYPTL-QLPEKCADDKPYVPTYQVSKEKAKS-L--GIEFIPLEVSLKDTVESLKEKG 319 (322)
T ss_pred HHHHHHCCCC-CCCCCCCCccccccccccChHHHHH-h--CCccccHHHHHHHHHHHHHHcC
Confidence 9999998742 11111 1111133456789999996 8 9998899999999999998765
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=290.61 Aligned_cols=290 Identities=20% Similarity=0.283 Sum_probs=211.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
+|+||||||+||||++|+++|+++|++ .... ...+.++.+|++|++++.+++. ++|+|||
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih 86 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA--GCDLVFH 86 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh--cCCEEEE
Confidence 578999999999999999999999974 1111 0135667899999999999998 5999999
Q ss_pred cccccCCccccccch-hhHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccceecCCC----CCCCcccccc-----CCCCC
Q psy7590 66 LAAMVGGLFHNMSHN-LDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTCIFPDKT----TYPIDETMVH-----NGPPH 134 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~vy~~~~----~~~~~E~~~~-----~~~~~ 134 (358)
+|+... ....++ ..++++|+.++.+|++++.+. ++++|||+||.++|+... ..+++|+.+. ..+..
T Consensus 87 ~A~~~~---~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~ 163 (338)
T PLN00198 87 VATPVN---FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKP 163 (338)
T ss_pred eCCCCc---cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCC
Confidence 999643 222333 356799999999999999887 589999999999998532 3456665321 11233
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPG 214 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (358)
|.+ +|+.||..+|.+++.+++.++++++++||++||||..... ++.++..+. ....
T Consensus 164 p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~------~~~~~~~~~-~~~~---------------- 219 (338)
T PLN00198 164 PTW-GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSD------IPSSLSLAM-SLIT---------------- 219 (338)
T ss_pred ccc-hhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCC------CCCcHHHHH-HHHc----------------
Confidence 444 7999999999999999998899999999999999986432 111221111 1222
Q ss_pred CCCCCCCccCCCcccCCccccCCCceEEEcC-CCC----ceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHH
Q psy7590 215 ANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG-TGK----PLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~----~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ 289 (358)
++++.+.+ .+. ..++|+|++|+|++++.++++....+ .| ++++..+++.
T Consensus 220 -----------------------~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~~~~--~~-~~~~~~~s~~ 273 (338)
T PLN00198 220 -----------------------GNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKESASG--RY-ICCAANTSVP 273 (338)
T ss_pred -----------------------CCccccccccccccccCCcceeEHHHHHHHHHHHhhCcCcCC--cE-EEecCCCCHH
Confidence 33443333 121 23799999999999999998754332 47 4556789999
Q ss_pred HHHHHHHHHhCC-CcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 290 EVAEAIANAFQF-KGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 290 ei~~~i~~~~g~-~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
|+++.+.+.++. +.++.+... + .......|++|+++ + ||+|+ +++++|+++++|++++.
T Consensus 274 el~~~i~~~~~~~~~~~~~~~~-~-~~~~~~~~~~k~~~-~--G~~p~~~l~~gi~~~~~~~~~~~ 334 (338)
T PLN00198 274 ELAKFLIKRYPQYQVPTDFGDF-P-SKAKLIISSEKLIS-E--GFSFEYGIEEIYDQTVEYFKAKG 334 (338)
T ss_pred HHHHHHHHHCCCCCCCcccccc-C-CCCccccChHHHHh-C--CceecCcHHHHHHHHHHHHHHcC
Confidence 999999999863 222222211 1 12345689999988 6 99977 99999999999998754
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=283.77 Aligned_cols=287 Identities=19% Similarity=0.281 Sum_probs=215.4
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc-------CC--CCcee--eecccccCCCHHHHHHHHhc--cCCcEEEEcccccCCc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR-------DD--ETWIF--VSSKEADLSNLESTQQLFSK--YKPTHVIHLAAMVGGL 73 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~-------~~--~~~~~--~~~~~~Dl~~~~~~~~~~~~--~~~d~Vih~a~~~~~~ 73 (358)
|||||||||||+++++.|++.|+. .. ..+.. ...+..|+.+.+.+..+.+. .++|+|||+|+...
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~-- 78 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD-- 78 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccC--
Confidence 699999999999999999999962 11 11110 12245778887777665541 37999999999754
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
....++...+++|+.++.+|+++|.+.++ +|||+||.+||++.. .+++|+++ +..|.+ .|+.+|..+|.++++
T Consensus 79 -~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~-~~~~e~~~---~~~p~~-~Y~~sK~~~e~~~~~ 151 (314)
T TIGR02197 79 -TTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGE-AGFREGRE---LERPLN-VYGYSKFLFDQYVRR 151 (314)
T ss_pred -ccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCC-CCcccccC---cCCCCC-HHHHHHHHHHHHHHH
Confidence 23456778899999999999999999987 799999999999763 45666652 234655 799999999999987
Q ss_pred HHh--hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCC
Q psy7590 154 YYQ--QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLF 231 (358)
Q Consensus 154 ~~~--~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (358)
+.. ..+++++++||+++||++..+.... ..++..++..+..
T Consensus 152 ~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~----~~~~~~~~~~~~~--------------------------------- 194 (314)
T TIGR02197 152 RVLPEALSAQVVGLRYFNVYGPREYHKGKM----ASVAFHLFNQIKA--------------------------------- 194 (314)
T ss_pred HhHhhccCCceEEEEEeeccCCCCCCCCCc----ccHHHHHHHHHhc---------------------------------
Confidence 643 2357999999999999986542211 1233334433333
Q ss_pred ccccCCCceEEEc------CCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcce
Q psy7590 232 PFCFTGGDEFKVL------GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI 305 (358)
Q Consensus 232 ~~~~~~g~~~~~~------~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i 305 (358)
+.++.++ +++.+.++|+|++|+++++..++.+ .. .++||+++++++|+.|+++.+.+.+|.+.++
T Consensus 195 ------~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~~--~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~ 265 (314)
T TIGR02197 195 ------GGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-GV--SGIFNLGTGRARSFNDLADAVFKALGKDEKI 265 (314)
T ss_pred ------CCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-cc--CceEEcCCCCCccHHHHHHHHHHHhCCCCcc
Confidence 5555543 4567789999999999999999987 22 2489999999999999999999999987655
Q ss_pred eecCCCCC----CccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHH
Q psy7590 306 TFDTNAAD----GQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFR 350 (358)
Q Consensus 306 ~~~~~~~~----~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~ 350 (358)
...+.+.. .......|++|+++.+ ||+|+ +++++++++++|++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~k~~~~l--~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 266 EYIPMPEALRGKYQYFTQADITKLRAAG--YYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred eeccCccccccccccccccchHHHHHhc--CCCCcccHHHHHHHHHHHHh
Confidence 54433221 1224568999999999 99965 99999999999985
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=284.64 Aligned_cols=277 Identities=24% Similarity=0.350 Sum_probs=203.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFF 84 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 84 (358)
||||||||+|+||++|.+.|.+.|+ ..........|++|.+++.+.++..+||+|||||+...+ ...+.++...+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~----~v~~~~r~~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~-~~ce~~p~~a~ 75 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGY----EVIATSRSDLDLTDPEAVAKLLEAFKPDVVINCAAYTNV-DACEKNPEEAY 75 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSE----EEEEESTTCS-TTSHHHHHHHHHHH--SEEEE------H-HHHHHSHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCC----EEEEeCchhcCCCCHHHHHHHHHHhCCCeEeccceeecH-HhhhhChhhhH
Confidence 5999999999999999999998875 222222337899999999999998889999999998652 34557899999
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEE
Q psy7590 85 RVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTS 164 (358)
Q Consensus 85 ~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~i 164 (358)
++|+.++.+|+++|...++ ++||+||..||+.....|++|++ ++.|.+ .||++|+.+|+.+++... +++|
T Consensus 76 ~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d----~~~P~~-~YG~~K~~~E~~v~~~~~----~~~I 145 (286)
T PF04321_consen 76 AINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDD----PPNPLN-VYGRSKLEGEQAVRAACP----NALI 145 (286)
T ss_dssp HHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS--------SS-HHHHHHHHHHHHHHHH-S----SEEE
T ss_pred HHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCC----CCCCCC-HHHHHHHHHHHHHHHhcC----CEEE
Confidence 9999999999999999998 79999999999887778899999 888988 799999999999987433 6899
Q ss_pred EecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEc
Q psy7590 165 VIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244 (358)
Q Consensus 165 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 244 (358)
+|++++||+... .++..+++...+ ++++.++
T Consensus 146 lR~~~~~g~~~~----------~~~~~~~~~~~~---------------------------------------~~~i~~~ 176 (286)
T PF04321_consen 146 LRTSWVYGPSGR----------NFLRWLLRRLRQ---------------------------------------GEPIKLF 176 (286)
T ss_dssp EEE-SEESSSSS----------SHHHHHHHHHHC---------------------------------------TSEEEEE
T ss_pred EecceecccCCC----------chhhhHHHHHhc---------------------------------------CCeeEee
Confidence 999999999432 166666666666 8888876
Q ss_pred CCCCceeeeeeHHHHHHHHHHHHHhcCC--CCCceEEccCCCcccHHHHHHHHHHHhCCCc-ceeecCCC-----CCCcc
Q psy7590 245 GTGKPLRQFIYSLDLARLFIWVLREYDS--VEPIILSVDEKDEVTIAEVAEAIANAFQFKG-RITFDTNA-----ADGQL 316 (358)
Q Consensus 245 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~-~i~~~~~~-----~~~~~ 316 (358)
. +..++.+|++|+|+++..++++... ...++||+++++.+|+.|+++.+++.+|.+. .+...... .....
T Consensus 177 ~--d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~ 254 (286)
T PF04321_consen 177 D--DQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPR 254 (286)
T ss_dssp S--SCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-S
T ss_pred C--CceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCC
Confidence 5 4567889999999999999998644 1235999999999999999999999999877 44433221 22233
Q ss_pred ccccchHHHHhhhCCCCccccHHHHHHHHHHHH
Q psy7590 317 KKTASNRKLRELRGPGFEFTPFQQAVQESVAWF 349 (358)
Q Consensus 317 ~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~ 349 (358)
...+|++|+++.+ |+++++|+++|+++++.+
T Consensus 255 ~~~L~~~kl~~~~--g~~~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 255 NTSLDCRKLKNLL--GIKPPPWREGLEELVKQY 285 (286)
T ss_dssp BE-B--HHHHHCT--TS---BHHHHHHHHHHHH
T ss_pred cccccHHHHHHcc--CCCCcCHHHHHHHHHHHh
Confidence 5679999999999 999999999999999865
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=277.91 Aligned_cols=274 Identities=20% Similarity=0.280 Sum_probs=215.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHH
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFR 85 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~ 85 (358)
||||||||||+|++|+++|+++|++ ...+....+|+.+++++.+++++.++|+|||+|+.... .....++...++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~----v~~~~r~~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~~~ 75 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRV----VVALTSSQLDLTDPEALERLLRAIRPDAVVNTAAYTDV-DGAESDPEKAFA 75 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCE----EEEeCCcccCCCCHHHHHHHHHhCCCCEEEECCccccc-cccccCHHHHHH
Confidence 5899999999999999999999873 22222236899999999999998778999999997542 122345677899
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEE
Q psy7590 86 VNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSV 165 (358)
Q Consensus 86 ~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~il 165 (358)
.|+.++.+++++|++.+. +|||+||.+||+.....+++|++ ++.|.+ .|+.+|..+|+.++.+ +.+++++
T Consensus 76 ~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~----~~~~~~-~Y~~~K~~~E~~~~~~----~~~~~il 145 (287)
T TIGR01214 76 VNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDD----ATNPLN-VYGQSKLAGEQAIRAA----GPNALIV 145 (287)
T ss_pred HHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCC----CCCCcc-hhhHHHHHHHHHHHHh----CCCeEEE
Confidence 999999999999999886 89999999999876667899988 667766 7999999999999764 6799999
Q ss_pred ecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcC
Q psy7590 166 IPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG 245 (358)
Q Consensus 166 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 245 (358)
||+++||+.... . ++..++..+.+ +.++.+.+
T Consensus 146 R~~~v~G~~~~~-----~----~~~~~~~~~~~---------------------------------------~~~~~~~~ 177 (287)
T TIGR01214 146 RTSWLYGGGGGR-----N----FVRTMLRLAGR---------------------------------------GEELRVVD 177 (287)
T ss_pred EeeecccCCCCC-----C----HHHHHHHHhhc---------------------------------------CCCceEec
Confidence 999999997421 1 23333333333 55666655
Q ss_pred CCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcce------eec-----CCCCCC
Q psy7590 246 TGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI------TFD-----TNAADG 314 (358)
Q Consensus 246 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i------~~~-----~~~~~~ 314 (358)
+ ..++|+|++|+|+++..++.+....+ ++||+++++.+++.|+++.+.+.+|++... ... +.+...
T Consensus 178 ~--~~~~~v~v~Dva~a~~~~~~~~~~~~-~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (287)
T TIGR01214 178 D--QIGSPTYAKDLARVIAALLQRLARAR-GVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARR 254 (287)
T ss_pred C--CCcCCcCHHHHHHHHHHHHhhccCCC-CeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCC
Confidence 3 56789999999999999998753333 489999999999999999999999976531 111 111112
Q ss_pred ccccccchHHHHhhhCCCCccccHHHHHHHHHH
Q psy7590 315 QLKKTASNRKLRELRGPGFEFTPFQQAVQESVA 347 (358)
Q Consensus 315 ~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~ 347 (358)
.....+|++|++++| ||++++++++|+++++
T Consensus 255 ~~~~~~d~~~~~~~l--g~~~~~~~~~l~~~~~ 285 (287)
T TIGR01214 255 PAYSVLDNTKLVKTL--GTPLPHWREALRAYLQ 285 (287)
T ss_pred CCccccchHHHHHHc--CCCCccHHHHHHHHHh
Confidence 234579999999999 9988899999998875
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=279.75 Aligned_cols=301 Identities=23% Similarity=0.317 Sum_probs=229.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccC------C----CCce------eeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRD------D----ETWI------FVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~------~----~~~~------~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
|||||||||++|++|++.|+++|++- . .... .+..+.+|+++++++.++++..++|+|||+|+.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 58999999999999999999998730 0 0001 244668999999999999986679999999997
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
... .....++...++.|+.++.+++++|.+.+++++|++||.++|+.....+++|++ +..|.. .|+.+|..+|.
T Consensus 81 ~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~----~~~~~~-~y~~sK~~~e~ 154 (328)
T TIGR01179 81 IAV-GESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDS----PLGPIN-PYGRSKLMSER 154 (328)
T ss_pred cCc-chhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccC----CCCCCC-chHHHHHHHHH
Confidence 532 123346667889999999999999999999999999999999877666788888 666666 79999999999
Q ss_pred HHHHHHhh-cCceEEEEecCcccCCCCCCCCCc-ccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCc
Q psy7590 150 LNKAYYQQ-HGVTYTSVIPCNVFGPHDNYNLES-SHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIP 227 (358)
Q Consensus 150 ~~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (358)
++..+++. .+++++++||+++||+........ ......++..+...... +
T Consensus 155 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------------------- 206 (328)
T TIGR01179 155 ILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVG-K--------------------------- 206 (328)
T ss_pred HHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHh-C---------------------------
Confidence 99998776 789999999999999964321100 01112233333322211 0
Q ss_pred ccCCccccCCCceEEEc------CCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccHHHHHHHHHHHhC
Q psy7590 228 FSLFPFCFTGGDEFKVL------GTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 228 ~~~~~~~~~~g~~~~~~------~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~~ei~~~i~~~~g 300 (358)
..++.++ .++...++|||++|+++++..++.+... ..+++||++++.++|+.|+++.+++.+|
T Consensus 207 ----------~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g 276 (328)
T TIGR01179 207 ----------RDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSG 276 (328)
T ss_pred ----------CCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhC
Confidence 2233332 2456678999999999999999986422 2345899999999999999999999999
Q ss_pred CCcceeecCCCCCCccccccchHHHHhhhCCCCccc--cHHHHHHHHHHHHHHh
Q psy7590 301 FKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT--PFQQAVQESVAWFREN 352 (358)
Q Consensus 301 ~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~--~~~~~l~~~~~~~~~~ 352 (358)
++..+...+...........|++|++++| ||+|+ +++++++++++|++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--g~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 277 VDFPVELAPRRPGDPASLVADASKIRREL--GWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred CCcceEeCCCCCccccchhcchHHHHHHh--CCCCCcchHHHHHHHHHHHHhcC
Confidence 88777655544333445567999999999 99976 4999999999998764
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=281.82 Aligned_cols=292 Identities=20% Similarity=0.182 Sum_probs=214.4
Q ss_pred CCC-CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhccCC
Q psy7590 1 MAE-EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 1 m~~-~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
|.. .|+||||||+||||++|++.|+++|++ .... ...+.++.+|+++++++.++++ ++
T Consensus 1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~ 78 (325)
T PLN02989 1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID--GC 78 (325)
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc--CC
Confidence 444 478999999999999999999999874 1111 0134567899999999999998 59
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccceecCC-----CCCCCccccccCCC--
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTCIFPDK-----TTYPIDETMVHNGP-- 132 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~vy~~~-----~~~~~~E~~~~~~~-- 132 (358)
|+|||+|+.... .....++...+++|+.++.+++++|.+. ++++||++||.++|+.. ...+++|+++....
T Consensus 79 d~vih~A~~~~~-~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~ 157 (325)
T PLN02989 79 ETVFHTASPVAI-TVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFA 157 (325)
T ss_pred CEEEEeCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHh
Confidence 999999996532 1233455678999999999999999886 57899999999876542 23467888732100
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFP 212 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (358)
..+.+ .|+.+|..+|.++..+.+.+|++++++||+++|||...+.. .+++.++..++ .
T Consensus 158 ~~~~~-~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~---~~~~~~i~~~~----~-------------- 215 (325)
T PLN02989 158 EERKQ-WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTL---NFSVAVIVELM----K-------------- 215 (325)
T ss_pred ccccc-chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCC---CchHHHHHHHH----c--------------
Confidence 01123 69999999999999998888999999999999999865421 23333433332 2
Q ss_pred CCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHH
Q psy7590 213 PGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVA 292 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~ 292 (358)
|+.+ .+ .+.++|+|++|+|++++.+++++... ++||++ +..+|+.|++
T Consensus 216 -------------------------~~~~--~~--~~~r~~i~v~Dva~a~~~~l~~~~~~--~~~ni~-~~~~s~~ei~ 263 (325)
T PLN02989 216 -------------------------GKNP--FN--TTHHRFVDVRDVALAHVKALETPSAN--GRYIID-GPVVTIKDIE 263 (325)
T ss_pred -------------------------CCCC--CC--CcCcCeeEHHHHHHHHHHHhcCcccC--ceEEEe-cCCCCHHHHH
Confidence 3322 11 23578999999999999999875432 379995 5689999999
Q ss_pred HHHHHHhCCCcceeecCC--CCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 293 EAIANAFQFKGRITFDTN--AADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 293 ~~i~~~~g~~~~i~~~~~--~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
+.+.+.++.. .+...+. +......+..|++|+++ | ||.|. +++++|+++++|+++..
T Consensus 264 ~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~-l--g~~p~~~l~~gi~~~~~~~~~~~ 323 (325)
T PLN02989 264 NVLREFFPDL-CIADRNEDITELNSVTFNVCLDKVKS-L--GIIEFTPTETSLRDTVLSLKEKC 323 (325)
T ss_pred HHHHHHCCCC-CCCCCCCCcccccccCcCCCHHHHHH-c--CCCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999732 2211111 11112355788999987 7 99865 99999999999997653
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=281.19 Aligned_cols=284 Identities=20% Similarity=0.229 Sum_probs=210.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
++|||||||||||++|+++|+++|++ .... ...++++.+|+++++++.++++ ++|+|||
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~vih 83 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE--GCDAVFH 83 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh--CCCEEEE
Confidence 68999999999999999999999984 1110 1135667899999999999998 5999999
Q ss_pred cccccCCccccccch-hhHHHHHHHHHHHHHHHHHhc-CCCEEEEeecccee--cCC---CCCCCccccccCC--CCCCC
Q psy7590 66 LAAMVGGLFHNMSHN-LDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTCIF--PDK---TTYPIDETMVHNG--PPHPS 136 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~vy--~~~---~~~~~~E~~~~~~--~~~p~ 136 (358)
+|+.... ...++ ...+++|+.++.+++++|++. +++||||+||.++| +.. ...+++|+++... +..+.
T Consensus 84 ~A~~~~~---~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~ 160 (322)
T PLN02986 84 TASPVFF---TVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK 160 (322)
T ss_pred eCCCcCC---CCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence 9997531 22233 357899999999999999986 68999999999754 432 1345777764210 01233
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
+ .|+.+|..+|.+++.+.++++++++++||+++|||...+.. .+...++..++ .
T Consensus 161 ~-~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~---~~~~~~~~~~~----~------------------ 214 (322)
T PLN02986 161 N-WYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTL---NFSVELIVDFI----N------------------ 214 (322)
T ss_pred c-chHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCC---CccHHHHHHHH----c------------------
Confidence 4 79999999999999999888999999999999999754321 11222333332 1
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
|+++ ++ .+.++|+|++|+|++++.+++++... + .||++ +..+|+.|+++.+.
T Consensus 215 ---------------------g~~~--~~--~~~~~~v~v~Dva~a~~~al~~~~~~-~-~yni~-~~~~s~~e~~~~i~ 266 (322)
T PLN02986 215 ---------------------GKNL--FN--NRFYRFVDVRDVALAHIKALETPSAN-G-RYIID-GPIMSVNDIIDILR 266 (322)
T ss_pred ---------------------CCCC--CC--CcCcceeEHHHHHHHHHHHhcCcccC-C-cEEEe-cCCCCHHHHHHHHH
Confidence 4332 22 45678999999999999999876443 3 69995 56899999999999
Q ss_pred HHhCCCcceeecCCCCCCccc--cccchHHHHhhhCCCCccccHHHHHHHHHHHHHHh
Q psy7590 297 NAFQFKGRITFDTNAADGQLK--KTASNRKLRELRGPGFEFTPFQQAVQESVAWFREN 352 (358)
Q Consensus 297 ~~~g~~~~i~~~~~~~~~~~~--~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~~ 352 (358)
+.++. ..+... .+...... ...|++|++. | ||++++++|+|+++++|+++.
T Consensus 267 ~~~~~-~~~~~~-~~~~~~~~~~~~~d~~~~~~-l--g~~~~~l~e~~~~~~~~~~~~ 319 (322)
T PLN02986 267 ELFPD-LCIADT-NEESEMNEMICKVCVEKVKN-L--GVEFTPMKSSLRDTILSLKEK 319 (322)
T ss_pred HHCCC-CCCCCC-CccccccccCCccCHHHHHH-c--CCcccCHHHHHHHHHHHHHHc
Confidence 99973 222221 11111212 2379999876 7 999999999999999999874
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=270.06 Aligned_cols=290 Identities=22% Similarity=0.241 Sum_probs=216.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
+|+|||||||||||+||++.||++||+ ++.. ......+.+||++++++.++++ +||.||
T Consensus 6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--gcdgVf 83 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID--GCDGVF 83 (327)
T ss_pred CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh--CCCEEE
Confidence 479999999999999999999999993 1111 1124566999999999999999 699999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceec-C----CCCCCCccccccCC--CCCCC
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFP-D----KTTYPIDETMVHNG--PPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~-~----~~~~~~~E~~~~~~--~~~p~ 136 (358)
|+|+++.. ....+..++.++.+.||.|+|++|++.. ||||||+||.++.. . +....++|+.|... .....
T Consensus 84 H~Asp~~~--~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~ 161 (327)
T KOG1502|consen 84 HTASPVDF--DLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK 161 (327)
T ss_pred EeCccCCC--CCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence 99999763 2222345899999999999999999998 99999999995443 2 12356888876321 11112
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
. .|..+|..+|+...+++.+.+++.+++-|+.|+||...+.... ....++..+.
T Consensus 162 ~-~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~------s~~~~l~~i~------------------- 215 (327)
T KOG1502|consen 162 L-WYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNS------SLNALLKLIK------------------- 215 (327)
T ss_pred H-HHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccch------hHHHHHHHHh-------------------
Confidence 3 5999999999999999999999999999999999987663321 1222222222
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
|. ...+ .+....|+||+|+|.+++.+++++...++ |.+ .+..+++.|+++.+.
T Consensus 216 ---------------------G~-~~~~--~n~~~~~VdVrDVA~AHv~a~E~~~a~GR--yic-~~~~~~~~ei~~~l~ 268 (327)
T KOG1502|consen 216 ---------------------GL-AETY--PNFWLAFVDVRDVALAHVLALEKPSAKGR--YIC-VGEVVSIKEIADILR 268 (327)
T ss_pred ---------------------cc-cccC--CCCceeeEeHHHHHHHHHHHHcCcccCce--EEE-ecCcccHHHHHHHHH
Confidence 21 1111 12234489999999999999999888765 644 456777999999999
Q ss_pred HHhCCCcceeec-CCC-CCCccccccchHHHHhhhCCCCccccHHHHHHHHHHHHHHhh
Q psy7590 297 NAFQFKGRITFD-TNA-ADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENH 353 (358)
Q Consensus 297 ~~~g~~~~i~~~-~~~-~~~~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~~~ 353 (358)
+.++... +... ... ........++++|++.+. |+++++++|++.+++.++++..
T Consensus 269 ~~~P~~~-ip~~~~~~~~~~~~~~~~~~~k~k~lg--~~~~~~l~e~~~dt~~sl~~~~ 324 (327)
T KOG1502|consen 269 ELFPDYP-IPKKNAEEHEGFLTSFKVSSEKLKSLG--GFKFRPLEETLSDTVESLREKG 324 (327)
T ss_pred HhCCCCC-CCCCCCccccccccccccccHHHHhcc--cceecChHHHHHHHHHHHHHhc
Confidence 9998544 2111 111 222333468999999985 5889999999999999998764
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=280.12 Aligned_cols=296 Identities=21% Similarity=0.262 Sum_probs=211.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.|+||||||+||||++|+++|+++|++ ... ....+.++.+|+++++.+.++++ ++|+|||+|
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~d~Vih~A 87 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK--GCDGVFHVA 87 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc--CCCEEEECC
Confidence 469999999999999999999999974 110 01235667899999999999998 599999999
Q ss_pred cccCCcc-ccccchhhH-----HHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCC-----CCCCccccccCC----
Q psy7590 68 AMVGGLF-HNMSHNLDF-----FRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKT-----TYPIDETMVHNG---- 131 (358)
Q Consensus 68 ~~~~~~~-~~~~~~~~~-----~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~-----~~~~~E~~~~~~---- 131 (358)
+..+... ....++... ++.|+.++.+|+++|++.+ +++|||+||.++|+... ..+++|+.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~ 167 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW 167 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence 9764311 122344433 4455699999999999885 88999999999998432 135677632110
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARF 211 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (358)
++.+...+|+.||.++|+++..+++..+++++++||++||||..... ++.++..++..+.
T Consensus 168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~------~~~~~~~~~~~~~-------------- 227 (353)
T PLN02896 168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS------VPSSIQVLLSPIT-------------- 227 (353)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC------CCchHHHHHHHhc--------------
Confidence 11222337999999999999999998899999999999999976432 3344544433211
Q ss_pred CCCCCCCCCCccCCCcccCCccccCCCce--EEEcCC---CCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcc
Q psy7590 212 PPGANSFGLDKLDLIPFSLFPFCFTGGDE--FKVLGT---GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEV 286 (358)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~---~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~ 286 (358)
|+. +...+. ....++|||++|+|++++.++++.... + +|++ ++..+
T Consensus 228 --------------------------g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~~-~-~~~~-~~~~~ 278 (353)
T PLN02896 228 --------------------------GDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQTKAE-G-RYIC-CVDSY 278 (353)
T ss_pred --------------------------CCccccccccccccccCceeEEeHHHHHHHHHHHHhCCCcC-c-cEEe-cCCCC
Confidence 211 111111 112469999999999999999864333 2 5754 56889
Q ss_pred cHHHHHHHHHHHhCCC-cceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 287 TIAEVAEAIANAFQFK-GRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 287 s~~ei~~~i~~~~g~~-~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
++.|+++.+.+.++.. ..+...+...... ....|+++++. | ||+|+ +++++|++++.|++++.-
T Consensus 279 s~~el~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-l--Gw~p~~~l~~~i~~~~~~~~~~~~ 344 (353)
T PLN02896 279 DMSELINHLSKEYPCSNIQVRLDEEKRGSI-PSEISSKKLRD-L--GFEYKYGIEEIIDQTIDCCVDHGF 344 (353)
T ss_pred CHHHHHHHHHHhCCCCCccccccccccCcc-ccccCHHHHHH-c--CCCccCCHHHHHHHHHHHHHHCCC
Confidence 9999999999999732 2222222222222 24568888875 7 99977 999999999999998764
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=263.86 Aligned_cols=272 Identities=21% Similarity=0.274 Sum_probs=226.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHH
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFR 85 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~ 85 (358)
+|||||++|++|++|++.|. .++ ..........|++|++.+.+++...+||+|||+|+.... ...+.+++..+.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~~~----~v~a~~~~~~Ditd~~~v~~~i~~~~PDvVIn~AAyt~v-D~aE~~~e~A~~ 75 (281)
T COG1091 2 KILITGANGQLGTELRRALP-GEF----EVIATDRAELDITDPDAVLEVIRETRPDVVINAAAYTAV-DKAESEPELAFA 75 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-CCc----eEEeccCccccccChHHHHHHHHhhCCCEEEECcccccc-ccccCCHHHHHH
Confidence 59999999999999999998 222 233333345899999999999999899999999998763 456677899999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEE
Q psy7590 86 VNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSV 165 (358)
Q Consensus 86 ~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~il 165 (358)
+|..++.++.++|++.|. ++||+||.+||....+.|+.|++ ++.|.+ .||+||+.+|+.++.+ +-+.+|+
T Consensus 76 vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D----~~~P~n-vYG~sKl~GE~~v~~~----~~~~~I~ 145 (281)
T COG1091 76 VNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETD----TPNPLN-VYGRSKLAGEEAVRAA----GPRHLIL 145 (281)
T ss_pred hHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCC----CCCChh-hhhHHHHHHHHHHHHh----CCCEEEE
Confidence 999999999999999998 69999999999988788999999 999999 7999999999999875 4568999
Q ss_pred ecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcC
Q psy7590 166 IPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG 245 (358)
Q Consensus 166 Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 245 (358)
|.+++||.... .|+..+++...+ |+++.+..
T Consensus 146 Rtswv~g~~g~----------nFv~tml~la~~---------------------------------------~~~l~vv~ 176 (281)
T COG1091 146 RTSWVYGEYGN----------NFVKTMLRLAKE---------------------------------------GKELKVVD 176 (281)
T ss_pred EeeeeecCCCC----------CHHHHHHHHhhc---------------------------------------CCceEEEC
Confidence 99999999763 277788888877 77777653
Q ss_pred CCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCccee-ecC-----CCCCCccccc
Q psy7590 246 TGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT-FDT-----NAADGQLKKT 319 (358)
Q Consensus 246 ~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~-~~~-----~~~~~~~~~~ 319 (358)
++..+.+++.|+|+++..++......+ +||+++....||.|+++.|.+.++.+..+. ... .....+....
T Consensus 177 --Dq~gsPt~~~dlA~~i~~ll~~~~~~~--~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~ 252 (281)
T COG1091 177 --DQYGSPTYTEDLADAILELLEKEKEGG--VYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSS 252 (281)
T ss_pred --CeeeCCccHHHHHHHHHHHHhccccCc--EEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccc
Confidence 455667999999999999998865543 899999888999999999999998665433 111 1122333456
Q ss_pred cchHHHHhhhCCCCccccHHHHHHHHHHH
Q psy7590 320 ASNRKLRELRGPGFEFTPFQQAVQESVAW 348 (358)
Q Consensus 320 ~~~~k~~~~l~~G~~~~~~~~~l~~~~~~ 348 (358)
+++.|+++.+ |+.++.|+++++++++.
T Consensus 253 L~~~k~~~~~--g~~~~~w~~~l~~~~~~ 279 (281)
T COG1091 253 LDTKKLEKAF--GLSLPEWREALKALLDE 279 (281)
T ss_pred cchHHHHHHh--CCCCccHHHHHHHHHhh
Confidence 8999999999 99999999999998864
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=279.43 Aligned_cols=290 Identities=19% Similarity=0.231 Sum_probs=208.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-------------eeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-------------IFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-------------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
.++||||||+||||++|+++|+++|++ ..... ..+.++.+|+++++.+.++++ ++|+||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--~~d~Vi 82 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR--GCTGVF 82 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh--CCCEEE
Confidence 468999999999999999999999874 11110 124567899999999999998 599999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCC-CCC-CccccccC-----CCCCCC
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKT-TYP-IDETMVHN-----GPPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~-~~~-~~E~~~~~-----~~~~p~ 136 (358)
|+|+.... .........+++|+.++.+|+++|.+.+ +++|||+||.++|+... ..+ ++|+.+.. .+..|.
T Consensus 83 H~A~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 160 (351)
T PLN02650 83 HVATPMDF--ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTG 160 (351)
T ss_pred EeCCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccccc
Confidence 99987541 1112234688999999999999999987 78999999997776432 233 56664311 112233
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
+ +|+.||..+|.+++.+++.+|++++++||+++|||..... ..+.++..+. .. .
T Consensus 161 ~-~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~-----~~~~~~~~~~-~~-~------------------ 214 (351)
T PLN02650 161 W-MYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTS-----MPPSLITALS-LI-T------------------ 214 (351)
T ss_pred c-hHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCC-----CCccHHHHHH-Hh-c------------------
Confidence 3 7999999999999999988999999999999999976432 1222332221 11 1
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
+.... ++. ...++|+|++|+|++++.+++++...+ +| ++++..+++.|+++.+.
T Consensus 215 ---------------------~~~~~-~~~-~~~r~~v~V~Dva~a~~~~l~~~~~~~--~~-i~~~~~~s~~el~~~i~ 268 (351)
T PLN02650 215 ---------------------GNEAH-YSI-IKQGQFVHLDDLCNAHIFLFEHPAAEG--RY-ICSSHDATIHDLAKMLR 268 (351)
T ss_pred ---------------------CCccc-cCc-CCCcceeeHHHHHHHHHHHhcCcCcCc--eE-EecCCCcCHHHHHHHHH
Confidence 21111 121 124799999999999999998754332 57 56678899999999999
Q ss_pred HHhCCC-cceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 297 NAFQFK-GRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 297 ~~~g~~-~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
+.++.. .+... ............|++|++ .| ||+|+ +++++|+++++|+++..
T Consensus 269 ~~~~~~~~~~~~-~~~~~~~~~~~~d~~k~~-~l--G~~p~~~l~egl~~~i~~~~~~~ 323 (351)
T PLN02650 269 EKYPEYNIPARF-PGIDEDLKSVEFSSKKLT-DL--GFTFKYSLEDMFDGAIETCREKG 323 (351)
T ss_pred HhCcccCCCCCC-CCcCcccccccCChHHHH-Hh--CCCCCCCHHHHHHHHHHHHHHcC
Confidence 988631 11111 111223334456888875 57 99987 99999999999998765
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=273.80 Aligned_cols=242 Identities=21% Similarity=0.322 Sum_probs=189.4
Q ss_pred EEEcCCChhHHHHHHHHHHccc--c-------CCC-------CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 8 LVTGGTGLVGKAIEKIVKEEEK--R-------DDE-------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 8 lItGatG~lG~~l~~~L~~~g~--~-------~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
|||||+||||++|+++|+++|+ . ... ......++.+|++|++++.++++ ++|+|||+|++.+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~--g~d~V~H~Aa~~~ 78 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALE--GVDVVFHTAAPVP 78 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhc--CCceEEEeCcccc
Confidence 6999999999999999999993 1 111 11122367999999999999999 6999999999865
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC-CCC---CccccccCCCCCCCCcchHHHHHHH
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT-TYP---IDETMVHNGPPHPSNFGYSHAKRML 147 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~-~~~---~~E~~~~~~~~~p~~~~Y~~sK~~~ 147 (358)
. ....+.+.++++|+.||++|+++|++++++||||+||.+|+++.. ..+ .+|+++. +..+.+ .|+.||+++
T Consensus 79 ~--~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~--~~~~~~-~Y~~SK~~A 153 (280)
T PF01073_consen 79 P--WGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPY--PSSPLD-PYAESKALA 153 (280)
T ss_pred c--cCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcc--cccccC-chHHHHHHH
Confidence 3 223567789999999999999999999999999999999988622 222 4566543 344555 799999999
Q ss_pred HHHHHHHHh---h--cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCc
Q psy7590 148 DVLNKAYYQ---Q--HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222 (358)
Q Consensus 148 E~~~~~~~~---~--~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
|+++.++.. + ..+..|+|||+.||||++.. +.+.+.. ..+.
T Consensus 154 E~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~------~~~~~~~----~~~~------------------------ 199 (280)
T PF01073_consen 154 EKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR------LVPRLVK----MVRS------------------------ 199 (280)
T ss_pred HHHHHhhcccccccccceeEEEEeccEEeCccccc------ccchhhH----HHHh------------------------
Confidence 999999876 2 25999999999999998753 2222332 2233
Q ss_pred cCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhc------CCCCCceEEccCCCccc-HHHHHHHH
Q psy7590 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREY------DSVEPIILSVDEKDEVT-IAEVAEAI 295 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~------~~~~~~v~n~~~~~~~s-~~ei~~~i 295 (358)
|......+++....+|+||+|+|.+++.+.++. ....++.|++.+++++. +.|++..+
T Consensus 200 ---------------g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~ 264 (280)
T PF01073_consen 200 ---------------GLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPL 264 (280)
T ss_pred ---------------cccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHH
Confidence 545556677888899999999999999987652 22355799999999999 99999999
Q ss_pred HHHhCCCcce
Q psy7590 296 ANAFQFKGRI 305 (358)
Q Consensus 296 ~~~~g~~~~i 305 (358)
.+.+|.+.+-
T Consensus 265 ~~~~G~~~~~ 274 (280)
T PF01073_consen 265 WEALGYPPPK 274 (280)
T ss_pred HHHCCCCCCc
Confidence 9999987543
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=271.18 Aligned_cols=286 Identities=19% Similarity=0.215 Sum_probs=216.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|+||||||+|++|++|++.|+++|+. .... ...+..+.+|+.+++++.++++ ++|+|||+|+...
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~--~~d~vi~~a~~~~-- 76 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVA--GCRALFHVAADYR-- 76 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHh--CCCEEEEeceecc--
Confidence 48999999999999999999999973 1111 1145667999999999999998 5999999998643
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecC-CCCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPD-KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~-~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
....++...++.|+.++.++++++.+.++++||++||.++|+. ....+.+|+.+.. +..+.. .|+.+|..+|++++
T Consensus 77 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~-~~~~~~-~Y~~sK~~~e~~~~ 153 (328)
T TIGR03466 77 -LWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSS-LDDMIG-HYKRSKFLAEQAAL 153 (328)
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCC-cccccC-hHHHHHHHHHHHHH
Confidence 2235677889999999999999999999999999999999985 3345788887321 111123 79999999999999
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
.+...++++++++||+++||+...... ....++...+ ..
T Consensus 154 ~~~~~~~~~~~ilR~~~~~G~~~~~~~----~~~~~~~~~~---~~---------------------------------- 192 (328)
T TIGR03466 154 EMAAEKGLPVVIVNPSTPIGPRDIKPT----PTGRIIVDFL---NG---------------------------------- 192 (328)
T ss_pred HHHHhcCCCEEEEeCCccCCCCCCCCC----cHHHHHHHHH---cC----------------------------------
Confidence 998888999999999999999754221 1111222211 11
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCC--
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTN-- 310 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~-- 310 (358)
+.+. ..+ ...+|+|++|+|++++.++++... +..|+++ ++.+++.|+++.+.+.+|++......+.
T Consensus 193 -----~~~~-~~~---~~~~~i~v~D~a~a~~~~~~~~~~--~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 260 (328)
T TIGR03466 193 -----KMPA-YVD---TGLNLVHVDDVAEGHLLALERGRI--GERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWL 260 (328)
T ss_pred -----CCce-eeC---CCcceEEHHHHHHHHHHHHhCCCC--CceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHH
Confidence 2121 112 235799999999999999987433 3468875 6889999999999999997654432221
Q ss_pred -----------------CCC--------CccccccchHHHHhhhCCCCccccHHHHHHHHHHHHHHh
Q psy7590 311 -----------------AAD--------GQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFREN 352 (358)
Q Consensus 311 -----------------~~~--------~~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~~ 352 (358)
.+. ......+|++|+++.| ||+|+++++++++++.|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--g~~p~~~~~~i~~~~~~~~~~ 325 (328)
T TIGR03466 261 LLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVREL--GYRQRPAREALRDAVEWFRAN 325 (328)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHc--CCCCcCHHHHHHHHHHHHHHh
Confidence 000 0124568999999999 999999999999999999875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=259.11 Aligned_cols=224 Identities=30% Similarity=0.447 Sum_probs=190.1
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------CCCCc------eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------DDETW------IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLF 74 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~ 74 (358)
|||||||||||++|+++|+++|+. ..... ..++++.+|+.|.+.+.++++..++|+|||+|+... ..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~-~~ 79 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSS-NP 79 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSS-HH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecccc-cc
Confidence 799999999999999999999984 11111 155677999999999999999878899999999853 11
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHH
Q psy7590 75 HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154 (358)
Q Consensus 75 ~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 154 (358)
.....+...++.|+.++.+++++|.+.++++|||+||..+|+.....+++|++ +..|.+ .|+.+|..+|++++.+
T Consensus 80 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~----~~~~~~-~Y~~~K~~~e~~~~~~ 154 (236)
T PF01370_consen 80 ESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDS----PINPLS-PYGASKRAAEELLRDY 154 (236)
T ss_dssp HHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTS----GCCHSS-HHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc----cccccc-cccccccccccccccc
Confidence 23367888999999999999999999999999999999999998778899998 667766 7999999999999999
Q ss_pred HhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccc
Q psy7590 155 YQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFC 234 (358)
Q Consensus 155 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (358)
.++++++++++||+++|||. .+......+++.++..+. .
T Consensus 155 ~~~~~~~~~~~R~~~vyG~~-~~~~~~~~~~~~~~~~~~----~------------------------------------ 193 (236)
T PF01370_consen 155 AKKYGLRVTILRPPNVYGPG-NPNNNSSSFLPSLIRQAL----K------------------------------------ 193 (236)
T ss_dssp HHHHTSEEEEEEESEEESTT-SSSSSTSSHHHHHHHHHH----T------------------------------------
T ss_pred cccccccccccccccccccc-ccccccccccchhhHHhh----c------------------------------------
Confidence 99889999999999999998 333334566666665554 3
Q ss_pred cCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEcc
Q psy7590 235 FTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVD 281 (358)
Q Consensus 235 ~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~ 281 (358)
|+++.+++++++.++|+|++|+|++++.+++++. ..+++||++
T Consensus 194 ---~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~yNig 236 (236)
T PF01370_consen 194 ---GKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK-AAGGIYNIG 236 (236)
T ss_dssp ---TSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC-TTTEEEEES
T ss_pred ---CCcccccCCCCCccceEEHHHHHHHHHHHHhCCC-CCCCEEEeC
Confidence 8889999999999999999999999999999987 334589985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=274.66 Aligned_cols=267 Identities=20% Similarity=0.245 Sum_probs=205.3
Q ss_pred CCEEEEE----cCCChhHHHHHHHHHHcccc------CCCC----------------ceeeecccccCCCHHHHHHHHhc
Q psy7590 4 EKIILVT----GGTGLVGKAIEKIVKEEEKR------DDET----------------WIFVSSKEADLSNLESTQQLFSK 57 (358)
Q Consensus 4 ~~~VlIt----GatG~lG~~l~~~L~~~g~~------~~~~----------------~~~~~~~~~Dl~~~~~~~~~~~~ 57 (358)
+|+|||| |||||+|++|++.|+++|++ .... ...++++.+|+.| +.+++..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~ 128 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAG 128 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhcc
Confidence 3689999 99999999999999999983 1110 1135666788766 4555544
Q ss_pred cCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 58 YKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
.++|+|||+++.. ..++.+|+++|++.|+++|||+||.++|+.....+..|++ +..|.
T Consensus 129 ~~~d~Vi~~~~~~-----------------~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~----~~~p~- 186 (378)
T PLN00016 129 AGFDVVYDNNGKD-----------------LDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGD----AVKPK- 186 (378)
T ss_pred CCccEEEeCCCCC-----------------HHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCC----cCCCc-
Confidence 4799999986521 4468899999999999999999999999976666777776 44442
Q ss_pred cchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANS 217 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (358)
. +|..+|.+++. .+++++++||+++||+..... +.+.+ +..+..
T Consensus 187 ---~-sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~~-----~~~~~----~~~~~~------------------- 230 (378)
T PLN00016 187 ---A-GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNKD-----CEEWF----FDRLVR------------------- 230 (378)
T ss_pred ---c-hHHHHHHHHHH----cCCCeEEEeceeEECCCCCCc-----hHHHH----HHHHHc-------------------
Confidence 2 79999988753 589999999999999975421 12223 333334
Q ss_pred CCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHH
Q psy7590 218 FGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIAN 297 (358)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~ 297 (358)
++++.+++++.+.++|+|++|+|+++..+++++...+ ++||+++++.+|+.|+++.+.+
T Consensus 231 --------------------~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~-~~yni~~~~~~s~~el~~~i~~ 289 (378)
T PLN00016 231 --------------------GRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKAAG-QIFNIVSDRAVTFDGMAKACAK 289 (378)
T ss_pred --------------------CCceeecCCCCeeeceecHHHHHHHHHHHhcCccccC-CEEEecCCCccCHHHHHHHHHH
Confidence 7788888888889999999999999999998754433 5899999999999999999999
Q ss_pred HhCCCcceeecCCC----------CCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 298 AFQFKGRITFDTNA----------ADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 298 ~~g~~~~i~~~~~~----------~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.+|.+.++...+.. +........|++|++++| ||+|+ +++++|+++++|++++..
T Consensus 290 ~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~L--Gw~p~~~l~egl~~~~~~~~~~~~ 355 (378)
T PLN00016 290 AAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEEL--GWTPKFDLVEDLKDRYELYFGRGR 355 (378)
T ss_pred HhCCCCceeecCccccCccccccccccccccccCHHHHHHhc--CCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99987765432211 011223456999999999 99977 999999999999987764
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=268.25 Aligned_cols=275 Identities=19% Similarity=0.153 Sum_probs=205.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------------ceeeecccccCCCHHHHHHHHhccCC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------------WIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------------~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
++|+||||||+||||++|++.|+++|++ .... ...+.++.+|++|++++.++++ ++
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--~~ 129 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--GC 129 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--hc
Confidence 4579999999999999999999999974 1100 0135667899999999999998 59
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeecc--ceecCC--CC--CCCccccccC--C
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLST--CIFPDK--TT--YPIDETMVHN--G 131 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~--~vy~~~--~~--~~~~E~~~~~--~ 131 (358)
|+|||+|+...+.. .........+.|+.++.+++++|++. +++||||+||. .+|+.. .. ..++|+++.. .
T Consensus 130 d~V~hlA~~~~~~~-~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~ 208 (367)
T PLN02686 130 AGVFHTSAFVDPAG-LSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF 208 (367)
T ss_pred cEEEecCeeecccc-cccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence 99999999764211 11123456788999999999999986 79999999996 578742 11 3467765422 1
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARF 211 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (358)
+..|.+ .|+.+|..+|.+++.+++..|++++++||++||||...... +..+..++ .
T Consensus 209 ~~~p~~-~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~------~~~~~~~~----~------------- 264 (367)
T PLN02686 209 CRDNKL-WYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRN------STATIAYL----K------------- 264 (367)
T ss_pred cccccc-hHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCC------ChhHHHHh----c-------------
Confidence 344545 69999999999999998888999999999999999753211 11111121 1
Q ss_pred CCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhc-CCCCCceEEccCCCcccHHH
Q psy7590 212 PPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREY-DSVEPIILSVDEKDEVTIAE 290 (358)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~~~~~~v~n~~~~~~~s~~e 290 (358)
|. +.+++++. ++|+||+|+|++++.+++.. ....+++| ++++..+++.|
T Consensus 265 --------------------------g~-~~~~g~g~--~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e 314 (367)
T PLN02686 265 --------------------------GA-QEMLADGL--LATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSRED 314 (367)
T ss_pred --------------------------CC-CccCCCCC--cCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHH
Confidence 32 33454443 46999999999999999853 11222367 88889999999
Q ss_pred HHHHHHHHhCCCcceeecCCC-CCCccccccchHHHHhhhCCCCccc
Q psy7590 291 VAEAIANAFQFKGRITFDTNA-ADGQLKKTASNRKLRELRGPGFEFT 336 (358)
Q Consensus 291 i~~~i~~~~g~~~~i~~~~~~-~~~~~~~~~~~~k~~~~l~~G~~~~ 336 (358)
+++.+.+.+|.+..+...+.+ ..+...+..|++|++++| ||.++
T Consensus 315 ~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~d~~kl~~~l--~~~~~ 359 (367)
T PLN02686 315 EAEELARQIGLPINKIAGNSSSDDTPARFELSNKKLSRLM--SRTRR 359 (367)
T ss_pred HHHHHHHHcCCCCCcCCCchhhcCCcccccccHHHHHHHH--HHhhh
Confidence 999999999987766655544 556777889999999999 99865
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=260.21 Aligned_cols=296 Identities=20% Similarity=0.264 Sum_probs=230.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc--c-------CC----------CCceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK--R-------DD----------ETWIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~--~-------~~----------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
|+++.++|||||+||+|+||+++|++.+. + .. .....+++..+|+.+...+.+++. ++
T Consensus 1 ~~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~--~~- 77 (361)
T KOG1430|consen 1 MEKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ--GA- 77 (361)
T ss_pred CCcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc--Cc-
Confidence 78888999999999999999999999982 1 00 014456677899999999999999 57
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCC-CCCccccccCCCCCCCCcch
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT-YPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~-~~~~E~~~~~~~~~p~~~~Y 140 (358)
.|+|||+...+ .....+++...++|+.||++++++|.+.+++++||+||.+|+..... ..-+|+.+. |.+... .|
T Consensus 78 ~Vvh~aa~~~~-~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~--p~~~~d-~Y 153 (361)
T KOG1430|consen 78 VVVHCAASPVP-DFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPY--PLKHID-PY 153 (361)
T ss_pred eEEEeccccCc-cccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCC--cccccc-cc
Confidence 77887775432 12334688999999999999999999999999999999998876654 556666644 333333 79
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
+.||+.+|+++++.+...++..|.+||+.||||++. ..+|.++. .++.
T Consensus 154 ~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~------~~~~~i~~----~~~~---------------------- 201 (361)
T KOG1430|consen 154 GESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDK------RLLPKIVE----ALKN---------------------- 201 (361)
T ss_pred chHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCc------cccHHHHH----HHHc----------------------
Confidence 999999999999998766899999999999999876 33444333 3333
Q ss_pred CccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhc----CCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 221 DKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREY----DSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~----~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
|......+++....||+|+..++.+++.+.... ....+++|++.++.++...++...+.
T Consensus 202 -----------------g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~ 264 (361)
T KOG1430|consen 202 -----------------GGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLV 264 (361)
T ss_pred -----------------cCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHH
Confidence 666666677788899999999999888876543 33456799999999999999999999
Q ss_pred HHhCCCcc-eeec--------------------CCCC--------CCccccccchHHHHhhhCCCCccc-cHHHHHHHHH
Q psy7590 297 NAFQFKGR-ITFD--------------------TNAA--------DGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESV 346 (358)
Q Consensus 297 ~~~g~~~~-i~~~--------------------~~~~--------~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~ 346 (358)
+.+|...+ .... +..+ .......++..|+++.| ||+|. ++++++++++
T Consensus 265 ~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~f~~~kA~~~l--gY~P~~~~~e~~~~~~ 342 (361)
T KOG1430|consen 265 KALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRTFSIEKAKREL--GYKPLVSLEEAIQRTI 342 (361)
T ss_pred HhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccccCHHHHHHhh--CCCCcCCHHHHHHHHH
Confidence 99998766 2211 0011 01124568999999999 99976 9999999999
Q ss_pred HHHHHhhc
Q psy7590 347 AWFRENHS 354 (358)
Q Consensus 347 ~~~~~~~~ 354 (358)
.|+....+
T Consensus 343 ~~~~~~~~ 350 (361)
T KOG1430|consen 343 HWVASESD 350 (361)
T ss_pred HHHhhhhh
Confidence 98876654
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=251.58 Aligned_cols=273 Identities=17% Similarity=0.154 Sum_probs=201.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcc--ccccchhh
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLF--HNMSHNLD 82 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~--~~~~~~~~ 82 (358)
||||||||+||||++|++.|+++|++ +....+|+.+.+.+...+...++|+|||+|+..+... ....++..
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g~~-------V~~~~~~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~ 82 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQGID-------FHYGSGRLENRASLEADIDAVKPTHVFNAAGVTGRPNVDWCESHKVE 82 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCE-------EEEecCccCCHHHHHHHHHhcCCCEEEECCcccCCCCchhhhhCHHH
Confidence 68999999999999999999999872 2223578889888988888778999999999865321 23467889
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC------CCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy7590 83 FFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT------TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156 (358)
Q Consensus 83 ~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~------~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~ 156 (358)
.+++|+.++.+|+++|++.+++ ++++||.++|+... ..+++|++ ++.+..+.|+.+|+++|.++..+.+
T Consensus 83 ~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~----~p~~~~s~Yg~sK~~~E~~~~~y~~ 157 (298)
T PLN02778 83 TIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEED----TPNFTGSFYSKTKAMVEELLKNYEN 157 (298)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCC----CCCCCCCchHHHHHHHHHHHHHhhc
Confidence 9999999999999999999996 66778888887532 12467776 4444433799999999999988753
Q ss_pred hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccC
Q psy7590 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFT 236 (358)
Q Consensus 157 ~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (358)
..++|+..++|+.... .+.|+..++ .
T Consensus 158 -----~~~lr~~~~~~~~~~~-------~~~fi~~~~----~-------------------------------------- 183 (298)
T PLN02778 158 -----VCTLRVRMPISSDLSN-------PRNFITKIT----R-------------------------------------- 183 (298)
T ss_pred -----cEEeeecccCCccccc-------HHHHHHHHH----c--------------------------------------
Confidence 5688888777764221 123444333 2
Q ss_pred CCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcce---eecCC---
Q psy7590 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI---TFDTN--- 310 (358)
Q Consensus 237 ~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i---~~~~~--- 310 (358)
+.++...+ .+|+|++|++++++.++++.. . ++||++++..+|+.|+++.+++.+|....+ ...+.
T Consensus 184 -~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~--~-g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~ 254 (298)
T PLN02778 184 -YEKVVNIP-----NSMTILDELLPISIEMAKRNL--T-GIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKV 254 (298)
T ss_pred -CCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC--C-CeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHH
Confidence 44443332 268999999999999997532 2 389999999999999999999999964321 11111
Q ss_pred CCCCccccccchHHHHhhhCCCCccccHHHHHHHHHHHHHHhhc
Q psy7590 311 AADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHS 354 (358)
Q Consensus 311 ~~~~~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~~~~ 354 (358)
.........+|++|+++.+ +-.+...+++++..++..+..++
T Consensus 255 ~~~~~~~~~Ld~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 296 (298)
T PLN02778 255 IVAPRSNNELDTTKLKREF--PELLPIKESLIKYVFEPNKKTKK 296 (298)
T ss_pred HhCCCccccccHHHHHHhc--ccccchHHHHHHHHHHHHHhhhc
Confidence 0111122368999999997 65577889999999988865543
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-32 Score=255.59 Aligned_cols=262 Identities=23% Similarity=0.219 Sum_probs=200.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcc--cc------CCCC---------ceeeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEE--KR------DDET---------WIFVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g--~~------~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
|++.|+||||||+|+||++|+++|+++| ++ .... ...+.++.+|++|++++.++++ ++|+|
T Consensus 1 ~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~--~iD~V 78 (324)
T TIGR03589 1 MFNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR--GVDYV 78 (324)
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh--cCCEE
Confidence 6677899999999999999999999986 32 1111 1235667899999999999998 59999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
||+|+.... .....++...+++|+.++.+++++|.++++++||++||.. +..|.+ +|+.+
T Consensus 79 ih~Ag~~~~-~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~------------------~~~p~~-~Y~~s 138 (324)
T TIGR03589 79 VHAAALKQV-PAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK------------------AANPIN-LYGAT 138 (324)
T ss_pred EECcccCCC-chhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC------------------CCCCCC-HHHHH
Confidence 999997542 2234566789999999999999999999999999999953 223444 79999
Q ss_pred HHHHHHHHHHHH---hhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 144 KRMLDVLNKAYY---QQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 144 K~~~E~~~~~~~---~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
|..+|.+++.++ +..|++++++||+++|||.. .+++.+...+ ..
T Consensus 139 K~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-------~~i~~~~~~~----~~---------------------- 185 (324)
T TIGR03589 139 KLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-------SVVPFFKSLK----EE---------------------- 185 (324)
T ss_pred HHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-------CcHHHHHHHH----Hh----------------------
Confidence 999999997754 35689999999999999853 2344443332 22
Q ss_pred CccCCCcccCCccccCCCc-eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 221 DKLDLIPFSLFPFCFTGGD-EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
+. ++++. ++.+.++|+|++|++++++.++++... +++| ++++..+++.|+++.+.+..
T Consensus 186 -----------------~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~~~~~--~~~~-~~~~~~~sv~el~~~i~~~~ 244 (324)
T TIGR03589 186 -----------------GVTELPIT-DPRMTRFWITLEQGVNFVLKSLERMLG--GEIF-VPKIPSMKITDLAEAMAPEC 244 (324)
T ss_pred -----------------CCCCeeeC-CCCceEeeEEHHHHHHHHHHHHhhCCC--CCEE-ccCCCcEEHHHHHHHHHhhC
Confidence 54 56665 667789999999999999999987432 2477 56677899999999999865
Q ss_pred CCCcceeecCCCCCCc-cccccchHHHHhhhCCCCccc-cHHHHHHH
Q psy7590 300 QFKGRITFDTNAADGQ-LKKTASNRKLRELRGPGFEFT-PFQQAVQE 344 (358)
Q Consensus 300 g~~~~i~~~~~~~~~~-~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~ 344 (358)
+ +...+.++.+. .....|.+|+++.| ||+|. +++++++.
T Consensus 245 ~----~~~~~~~~g~~~~~~~~~~~~~~~~l--g~~~~~~l~~~~~~ 285 (324)
T TIGR03589 245 P----HKIVGIRPGEKLHEVMITEDDARHTY--ELGDYYAILPSISF 285 (324)
T ss_pred C----eeEeCCCCCchhHhhhcChhhhhhhc--CCCCeEEEcccccc
Confidence 3 33344444432 33557999999999 99966 99998753
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-31 Score=251.26 Aligned_cols=263 Identities=14% Similarity=0.069 Sum_probs=197.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-----CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|+|||||||||+|++|+++|+++|++ ... ....++++.+|++|++++.++++ ++|+|||+++...
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~--g~d~Vi~~~~~~~-- 76 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFK--GVTAIIDASTSRP-- 76 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHC--CCCEEEECCCCCC--
Confidence 48999999999999999999999984 111 12356778999999999999999 5999999876431
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
.++..+.++|+.++.+++++|++++++||||+||.++.. .+.. +|..+|..+|++++.
T Consensus 77 ----~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~-----------------~~~~-~~~~~K~~~e~~l~~ 134 (317)
T CHL00194 77 ----SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ-----------------YPYI-PLMKLKSDIEQKLKK 134 (317)
T ss_pred ----CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc-----------------cCCC-hHHHHHHHHHHHHHH
Confidence 345567889999999999999999999999999964321 1112 589999999998753
Q ss_pred HHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcc
Q psy7590 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPF 233 (358)
Q Consensus 154 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (358)
++++++++||+.+|+.. +.........
T Consensus 135 ----~~l~~tilRp~~~~~~~--------------~~~~~~~~~~----------------------------------- 161 (317)
T CHL00194 135 ----SGIPYTIFRLAGFFQGL--------------ISQYAIPILE----------------------------------- 161 (317)
T ss_pred ----cCCCeEEEeecHHhhhh--------------hhhhhhhhcc-----------------------------------
Confidence 68999999999887531 1111111111
Q ss_pred ccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCC-
Q psy7590 234 CFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAA- 312 (358)
Q Consensus 234 ~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~- 312 (358)
+.++.+. .+.+.++|||++|+|++++.+++++... +++||+++++.+|++|+++.+.+.+|++..+...+...
T Consensus 162 ----~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~~~-~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~ 235 (317)
T CHL00194 162 ----KQPIWIT-NESTPISYIDTQDAAKFCLKSLSLPETK-NKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLL 235 (317)
T ss_pred ----CCceEec-CCCCccCccCHHHHHHHHHHHhcCcccc-CcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHH
Confidence 3444443 4456679999999999999999875443 45999999999999999999999999876655332210
Q ss_pred ----------------CC----------ccccccchHHHHhhhCCCCcc---ccHHHHHHHHHHHHHHhhc
Q psy7590 313 ----------------DG----------QLKKTASNRKLRELRGPGFEF---TPFQQAVQESVAWFRENHS 354 (358)
Q Consensus 313 ----------------~~----------~~~~~~~~~k~~~~l~~G~~~---~~~~~~l~~~~~~~~~~~~ 354 (358)
.. ......+.+++++.| |+.| .+++++++++++...++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--g~~p~~~~~~~~~~~~~~~~~~~~~~ 304 (317)
T CHL00194 236 KLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIF--KIDPNELISLEDYFQEYFERILKRLK 304 (317)
T ss_pred HHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHh--CCChhhhhhHHHHHHHHHHHHHHHHH
Confidence 00 001224677889999 9986 5899999999988777554
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=262.17 Aligned_cols=297 Identities=15% Similarity=0.135 Sum_probs=209.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHH--cccc------CCCC-----------ceeeecccccCCCH------HHHHHHHhccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKE--EEKR------DDET-----------WIFVSSKEADLSNL------ESTQQLFSKYK 59 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~--~g~~------~~~~-----------~~~~~~~~~Dl~~~------~~~~~~~~~~~ 59 (358)
|+|||||||||||++|+++|++ .+++ .... ...++.+.+|++|+ +.+.++ . +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~--~ 77 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-G--D 77 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-c--C
Confidence 4899999999999999999994 5652 1100 02456678999984 445554 4 6
Q ss_pred CcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
+|+|||||+.... ........++|+.++.+++++|++.++++|||+||.++|+... .+.+|+++.. +..+.+ .
T Consensus 78 ~D~Vih~Aa~~~~----~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~-~~~~e~~~~~-~~~~~~-~ 150 (657)
T PRK07201 78 IDHVVHLAAIYDL----TADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYE-GVFREDDFDE-GQGLPT-P 150 (657)
T ss_pred CCEEEECceeecC----CCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCcc-Cccccccchh-hcCCCC-c
Confidence 9999999997542 2455678899999999999999999999999999999998653 3455554211 223334 7
Q ss_pred hHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
|+.+|+.+|+++.+ ..+++++++||++|||+........ ...+.++..++.....
T Consensus 151 Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~-~~~~~~~~~~~~~~~~--------------------- 205 (657)
T PRK07201 151 YHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDK-IDGPYYFFKVLAKLAK--------------------- 205 (657)
T ss_pred hHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCcccc-CCcHHHHHHHHHHhcc---------------------
Confidence 99999999999864 3589999999999999875432111 0011122222211111
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
....+.+.+.+....+++|++|+++++..++..+.. .+++||+++++++++.|+++.+.+.+
T Consensus 206 -----------------~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~~-~g~~~ni~~~~~~s~~el~~~i~~~~ 267 (657)
T PRK07201 206 -----------------LPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDGR-DGQTFHLTDPKPQRVGDIYNAFARAA 267 (657)
T ss_pred -----------------CCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcCC-CCCEEEeCCCCCCcHHHHHHHHHHHh
Confidence 012233445555678999999999999999875433 33589999999999999999999999
Q ss_pred CCCc---ceeecCCC----------------------C--------CCccccccchHHHHhhhC-CCCccccHHHHHHHH
Q psy7590 300 QFKG---RITFDTNA----------------------A--------DGQLKKTASNRKLRELRG-PGFEFTPFQQAVQES 345 (358)
Q Consensus 300 g~~~---~i~~~~~~----------------------~--------~~~~~~~~~~~k~~~~l~-~G~~~~~~~~~l~~~ 345 (358)
|.+. .....+.. . .......+|++++++.|. .|+...++++.+...
T Consensus 268 g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p~~~~~~~~~ 347 (657)
T PRK07201 268 GAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVPRLASYAPRL 347 (657)
T ss_pred CCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCCChHHHHHHH
Confidence 9876 22211110 0 011234688999999884 567777899999999
Q ss_pred HHHHHHhhc
Q psy7590 346 VAWFRENHS 354 (358)
Q Consensus 346 ~~~~~~~~~ 354 (358)
++||.++..
T Consensus 348 ~~~~~~~~~ 356 (657)
T PRK07201 348 WDYWERHLD 356 (657)
T ss_pred HHHHHhcCC
Confidence 999988753
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=251.85 Aligned_cols=247 Identities=19% Similarity=0.164 Sum_probs=181.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc---------CC---------------------------CCc-----eeeeccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR---------DD---------------------------ETW-----IFVSSKE 42 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~---------~~---------------------------~~~-----~~~~~~~ 42 (358)
.++|||||||||||++|+..|++.+.. +. ... ..+..+.
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 478999999999999999999975321 00 000 3456778
Q ss_pred ccCC-------CHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccce
Q psy7590 43 ADLS-------NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTCI 114 (358)
Q Consensus 43 ~Dl~-------~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~v 114 (358)
+|++ +.+.+..+++ ++|+|||+|+.... ..++....++|+.++.+|+++|++. ++++|||+||.+|
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~--~vD~ViH~AA~v~~----~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~v 164 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWK--EIDIVVNLAATTNF----DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYV 164 (491)
T ss_pred cccCCcCCCCChHHHHHHHHh--CCCEEEECccccCC----cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEE
Confidence 9998 4455667777 59999999998752 3567889999999999999999986 6899999999999
Q ss_pred ecCCCCCCCcccccc---------------------------------------------CC---CCCCCCcchHHHHHH
Q psy7590 115 FPDKTTYPIDETMVH---------------------------------------------NG---PPHPSNFGYSHAKRM 146 (358)
Q Consensus 115 y~~~~~~~~~E~~~~---------------------------------------------~~---~~~p~~~~Y~~sK~~ 146 (358)
||.... .+.|.... .. ...+++ .|+.||++
T Consensus 165 yG~~~~-~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn-~Y~~TK~~ 242 (491)
T PLN02996 165 CGEKSG-LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPN-TYVFTKAM 242 (491)
T ss_pred ecCCCc-eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCC-chHhhHHH
Confidence 986431 11111000 00 011334 69999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHH--HHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccC
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGL--IRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLD 224 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
+|.++..+.. +++++++||++|||+...+.. .++..+ ...++.....
T Consensus 243 aE~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~---gwi~~~~~~~~i~~~~~~-------------------------- 291 (491)
T PLN02996 243 GEMLLGNFKE--NLPLVIIRPTMITSTYKEPFP---GWIEGLRTIDSVIVGYGK-------------------------- 291 (491)
T ss_pred HHHHHHHhcC--CCCEEEECCCEeccCCcCCCC---CcccchhhHHHHHHHhcc--------------------------
Confidence 9999988743 899999999999999876532 122111 1122222222
Q ss_pred CCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcC--CCCCceEEccCC--CcccHHHHHHHHHHHhC
Q psy7590 225 LIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYD--SVEPIILSVDEK--DEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~v~n~~~~--~~~s~~ei~~~i~~~~g 300 (358)
|....+++++++.+||+||+|++++++.++.+.. .....+||++++ .++|+.|+++.+.+.++
T Consensus 292 -------------g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~ 358 (491)
T PLN02996 292 -------------GKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFS 358 (491)
T ss_pred -------------ceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhh
Confidence 6666788999999999999999999999988631 123459999998 89999999999999887
Q ss_pred CC
Q psy7590 301 FK 302 (358)
Q Consensus 301 ~~ 302 (358)
.-
T Consensus 359 ~~ 360 (491)
T PLN02996 359 KN 360 (491)
T ss_pred hC
Confidence 43
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-29 Score=220.81 Aligned_cols=296 Identities=16% Similarity=0.122 Sum_probs=238.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------------------CCCCceeeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------------------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
|+.||||-||+-|++|++.|++.|++ +......+..+.+|++|...+..+++..+||.|
T Consensus 3 K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdEI 82 (345)
T COG1089 3 KVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDEI 82 (345)
T ss_pred ceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchhh
Confidence 47899999999999999999999993 111122255679999999999999999999999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC--CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV--KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
+|+||... +..+++.|....+++-.|+.+||++.+..+. -||.+.||+..||.-...|.+|++ |..|.+ +|+
T Consensus 83 YNLaAQS~-V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~T----PFyPrS-PYA 156 (345)
T COG1089 83 YNLAAQSH-VGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETT----PFYPRS-PYA 156 (345)
T ss_pred eecccccc-ccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCC----CCCCCC-HHH
Confidence 99999865 4578899999999999999999999999863 389999999999998889999999 889988 899
Q ss_pred HHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCC
Q psy7590 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLD 221 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (358)
.+|..+--+...|.+.+|+-.|.=+..+--+|.+... |+.+=+...+..+..+
T Consensus 157 vAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~-----FVTRKIt~ava~Ik~G---------------------- 209 (345)
T COG1089 157 VAKLYAYWITVNYRESYGLFACNGILFNHESPLRGET-----FVTRKITRAVARIKLG---------------------- 209 (345)
T ss_pred HHHHHHHheeeehHhhcCceeecceeecCCCCCCccc-----eehHHHHHHHHHHHcc----------------------
Confidence 9999999999999999999999888888777766532 2222222222333320
Q ss_pred ccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCC
Q psy7590 222 KLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQF 301 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~ 301 (358)
.+.-...|+-+..|||-|+.|.+++++.++++..+. -|.++++...|++|+++...+..|.
T Consensus 210 ----------------~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~~Pd---dyViATg~t~sVrefv~~Af~~~g~ 270 (345)
T COG1089 210 ----------------LQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQEEPD---DYVIATGETHSVREFVELAFEMVGI 270 (345)
T ss_pred ----------------ccceEEeccccccccccchHHHHHHHHHHHccCCCC---ceEEecCceeeHHHHHHHHHHHcCc
Confidence 223344688899999999999999999999987644 5899999999999999999999997
Q ss_pred Cccee-------------------ecC--CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 302 KGRIT-------------------FDT--NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 302 ~~~i~-------------------~~~--~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
..++. ..+ .++..-.....|.+|+++.| ||+|. ++++.+++++++..+..+
T Consensus 271 ~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~~~L--GW~~~~~~~elv~~Mv~~dl~~~~ 343 (345)
T COG1089 271 DLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAKEKL--GWRPEVSLEELVREMVEADLEAAR 343 (345)
T ss_pred eEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHHHHc--CCccccCHHHHHHHHHHHHHHHhh
Confidence 66643 111 12223334567999999999 99965 999999999998766543
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=233.10 Aligned_cols=270 Identities=17% Similarity=0.204 Sum_probs=185.5
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------CCCCceeee-cccccCCCHHHHHHHHhccCCcEEEEcccccCCc-ccccc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVS-SKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL-FHNMS 78 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~-~~~~~ 78 (358)
|||||||||||+++++.|++.|++ ......... ....|+.. ..+...+. ++|+|||+|+..... .....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~D~Vvh~a~~~~~~~~~~~~ 77 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEGYKPWAP-LAESEALE--GADAVINLAGEPIADKRWTEE 77 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccceeeecccc-cchhhhcC--CCCEEEECCCCCcccccCCHH
Confidence 699999999999999999999884 111111100 00112222 33445555 699999999964311 01123
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCC--EEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVK--KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~--r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~ 156 (358)
.+..+++.|+.++.+|+++|++++++ +||+.||.++|+.....+++|++ ++.+.+ .|+..+...|..+..+ +
T Consensus 78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~----~~~~~~-~~~~~~~~~e~~~~~~-~ 151 (292)
T TIGR01777 78 RKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEED----SPAGDD-FLAELCRDWEEAAQAA-E 151 (292)
T ss_pred HHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCccc----CCCCCC-hHHHHHHHHHHHhhhc-h
Confidence 45678899999999999999999874 57777777899976667888887 444544 4667776777766544 4
Q ss_pred hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccC
Q psy7590 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFT 236 (358)
Q Consensus 157 ~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (358)
+.+++++++||+++||+... .++.++. .+....
T Consensus 152 ~~~~~~~ilR~~~v~G~~~~-------~~~~~~~-~~~~~~--------------------------------------- 184 (292)
T TIGR01777 152 DLGTRVVLLRTGIVLGPKGG-------ALAKMLP-PFRLGL--------------------------------------- 184 (292)
T ss_pred hcCCceEEEeeeeEECCCcc-------hhHHHHH-HHhcCc---------------------------------------
Confidence 46899999999999999632 1222221 111100
Q ss_pred CCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCC-----
Q psy7590 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNA----- 311 (358)
Q Consensus 237 ~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~----- 311 (358)
+.+ +++++..++|+|++|+|+++..+++++... ++||+++++.+|+.|+++.+++.+|.+..+. .+..
T Consensus 185 -~~~---~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~--g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~-~p~~~~~~~ 257 (292)
T TIGR01777 185 -GGP---LGSGRQWFSWIHIEDLVQLILFALENASIS--GPVNATAPEPVRNKEFAKALARALHRPAFFP-VPAFVLRAL 257 (292)
T ss_pred -ccc---cCCCCcccccEeHHHHHHHHHHHhcCcccC--CceEecCCCccCHHHHHHHHHHHhCCCCcCc-CCHHHHHHH
Confidence 212 367788899999999999999999875433 3799999999999999999999999764332 1110
Q ss_pred ----CC-CccccccchHHHHhhhCCCCccc--cHHHHH
Q psy7590 312 ----AD-GQLKKTASNRKLRELRGPGFEFT--PFQQAV 342 (358)
Q Consensus 312 ----~~-~~~~~~~~~~k~~~~l~~G~~~~--~~~~~l 342 (358)
+. .......+++|+++ + ||+|. +++|++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~-~--g~~~~~~~~~~~~ 292 (292)
T TIGR01777 258 LGEMADLLLKGQRVLPEKLLE-A--GFQFQYPDLDEAL 292 (292)
T ss_pred hchhhHHHhCCcccccHHHHh-c--CCeeeCcChhhcC
Confidence 10 12345678899987 6 99965 688764
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-29 Score=256.58 Aligned_cols=247 Identities=17% Similarity=0.171 Sum_probs=185.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-C-ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-T-WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN 76 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 76 (358)
|+|+|||||||||++++++|+++|++ ... . ...+.++.+|++|.+++.++++ ++|+|||+|+...+
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al~--~vD~VVHlAa~~~~---- 74 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMT--GADVVAHCAWVRGR---- 74 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHHh--CCCEEEECCCcccc----
Confidence 48999999999999999999999984 111 1 1235667899999999999998 59999999986431
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy7590 77 MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156 (358)
Q Consensus 77 ~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~ 156 (358)
..++|+.++.+++++|++.++++|||+||.. |..+|+++..
T Consensus 75 ------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~------------------------------K~aaE~ll~~--- 115 (854)
T PRK05865 75 ------NDHINIDGTANVLKAMAETGTGRIVFTSSGH------------------------------QPRVEQMLAD--- 115 (854)
T ss_pred ------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH------------------------------HHHHHHHHHH---
Confidence 4688999999999999999999999999851 7888887743
Q ss_pred hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccC
Q psy7590 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFT 236 (358)
Q Consensus 157 ~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (358)
++++++++||+++|||... .++..+.
T Consensus 116 -~gl~~vILRp~~VYGP~~~----------~~i~~ll------------------------------------------- 141 (854)
T PRK05865 116 -CGLEWVAVRCALIFGRNVD----------NWVQRLF------------------------------------------- 141 (854)
T ss_pred -cCCCEEEEEeceEeCCChH----------HHHHHHh-------------------------------------------
Confidence 5899999999999999621 2333322
Q ss_pred CCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhC---CCcceeecCCC--
Q psy7590 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQ---FKGRITFDTNA-- 311 (358)
Q Consensus 237 ~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g---~~~~i~~~~~~-- 311 (358)
..++...+++...++|+|++|+|+++..++++....+ ++||++++..+|+.|+++.+.+... .+.........
T Consensus 142 -~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~g-gvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~ 219 (854)
T PRK05865 142 -ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDS-GPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAEL 219 (854)
T ss_pred -cCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCC-CeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhh
Confidence 1122223445567899999999999999987543323 4899999999999999999887542 11111111000
Q ss_pred CCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 312 ADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 312 ~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.........|++|+++.| ||+|+ +++++|+++++||+.+..
T Consensus 220 ~~~~~~~~~D~sKar~~L--Gw~P~~sLeeGL~dti~~~r~ri~ 261 (854)
T PRK05865 220 ELLHSAPLMDVTLLRDRW--GFQPAWNAEECLEDFTLAVRGRIG 261 (854)
T ss_pred hcccCCccCCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHhhcc
Confidence 001123367999999999 99976 999999999999987644
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=228.14 Aligned_cols=263 Identities=15% Similarity=0.064 Sum_probs=187.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC---------C----ceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE---------T----WIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~---------~----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
.++|||||||||||++|+++|+++|++ ... . ...+.++.+|++|.+++.+++. ++|.|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~--~~d~v~ 83 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK--GCSGLF 83 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc--CCCEEE
Confidence 468999999999999999999999984 110 0 0135667899999999999998 599999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeecccee--cCC---CCCCCccccccCC--CCCCC
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTCIF--PDK---TTYPIDETMVHNG--PPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~vy--~~~---~~~~~~E~~~~~~--~~~p~ 136 (358)
|+++... .........+++|+.++.+++++|.+. +++|||++||..++ +.. ...+++|++|... ...+.
T Consensus 84 ~~~~~~~---~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 160 (297)
T PLN02583 84 CCFDPPS---DYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFK 160 (297)
T ss_pred EeCccCC---cccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcc
Confidence 9876543 112345678999999999999999987 58999999999664 311 1235777764210 01111
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
. .|+.||..+|+++..++++.|++++++||++||||...... + .+.
T Consensus 161 ~-~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~------~-----~~~---------------------- 206 (297)
T PLN02583 161 L-WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN------P-----YLK---------------------- 206 (297)
T ss_pred c-HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch------h-----hhc----------------------
Confidence 2 59999999999999998888999999999999999754210 0 110
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
+.. ....+ ..++||||+|+|++++.+++++...+ .|+++++....+.++++.+.
T Consensus 207 ---------------------~~~-~~~~~--~~~~~v~V~Dva~a~~~al~~~~~~~--r~~~~~~~~~~~~~~~~~~~ 260 (297)
T PLN02583 207 ---------------------GAA-QMYEN--GVLVTVDVNFLVDAHIRAFEDVSSYG--RYLCFNHIVNTEEDAVKLAQ 260 (297)
T ss_pred ---------------------CCc-ccCcc--cCcceEEHHHHHHHHHHHhcCcccCC--cEEEecCCCccHHHHHHHHH
Confidence 111 11111 23569999999999999999765544 48777665566789999999
Q ss_pred HHhCCCcceeec-CCCCCCccccccchHHHHhhhCCCCcc
Q psy7590 297 NAFQFKGRITFD-TNAADGQLKKTASNRKLRELRGPGFEF 335 (358)
Q Consensus 297 ~~~g~~~~i~~~-~~~~~~~~~~~~~~~k~~~~l~~G~~~ 335 (358)
+.++. .++... ...........++++|++++ |+++
T Consensus 261 ~~~p~-~~~~~~~~~~~~~~~~~~~~~~k~~~l---~~~~ 296 (297)
T PLN02583 261 MLSPL-IPSPPPYEMQGSEVYQQRIRNKKLNKL---MEDF 296 (297)
T ss_pred HhCCC-CCCCCcccccCCCccccccChHHHHHh---Cccc
Confidence 99974 222211 10011234567899999885 8863
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=248.81 Aligned_cols=266 Identities=17% Similarity=0.171 Sum_probs=195.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC--ccccccchh
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG--LFHNMSHNL 81 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~--~~~~~~~~~ 81 (358)
.||||||||+||||++|++.|.++|+. +.+..+|++|++.+...+...++|+|||||+..+. ......++.
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~-------v~~~~~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~ 452 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIA-------YEYGKGRLEDRSSLLADIRNVKPTHVFNAAGVTGRPNVDWCESHKV 452 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCe-------EEeeccccccHHHHHHHHHhhCCCEEEECCcccCCCCCChHHhCHH
Confidence 468999999999999999999988762 22335789999999999988889999999998642 123346788
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCC------CCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHH
Q psy7590 82 DFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDK------TTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYY 155 (358)
Q Consensus 82 ~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~------~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~ 155 (358)
..+++|+.++.+|+++|++.+++ +|++||.+||+.. ...+++|++ ++.|..+.|+.+|+.+|+++..+.
T Consensus 453 ~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~----~~~~~~~~Yg~sK~~~E~~~~~~~ 527 (668)
T PLN02260 453 ETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEED----KPNFTGSFYSKTKAMVEELLREYD 527 (668)
T ss_pred HHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCC----CCCCCCChhhHHHHHHHHHHHhhh
Confidence 99999999999999999999995 7788999998742 124788887 555542379999999999998863
Q ss_pred hhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcccc
Q psy7590 156 QQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCF 235 (358)
Q Consensus 156 ~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (358)
+..++|+.++||..... ...|+..+++.
T Consensus 528 -----~~~~~r~~~~~~~~~~~-------~~nfv~~~~~~---------------------------------------- 555 (668)
T PLN02260 528 -----NVCTLRVRMPISSDLSN-------PRNFITKISRY---------------------------------------- 555 (668)
T ss_pred -----hheEEEEEEecccCCCC-------ccHHHHHHhcc----------------------------------------
Confidence 35788888888754211 01255554431
Q ss_pred CCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCc---ceeecCC--
Q psy7590 236 TGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKG---RITFDTN-- 310 (358)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~---~i~~~~~-- 310 (358)
.+.+.+. .+..+++|++.+++.+++... +++||++++..+|+.|+++.+.+.++... ++.....
T Consensus 556 --~~~~~vp------~~~~~~~~~~~~~~~l~~~~~---~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~ 624 (668)
T PLN02260 556 --NKVVNIP------NSMTVLDELLPISIEMAKRNL---RGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAK 624 (668)
T ss_pred --ceeeccC------CCceehhhHHHHHHHHHHhCC---CceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhh
Confidence 2223331 235778889998888887422 24999999999999999999999884211 1111111
Q ss_pred -CCCCccccccchHHHHhhhCCCCccccHHHHHHHHHH
Q psy7590 311 -AADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVA 347 (358)
Q Consensus 311 -~~~~~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~ 347 (358)
.....+...+|++|+++.+ |+ +.+|+++|++++.
T Consensus 625 ~~~a~rp~~~l~~~k~~~~~--~~-~~~~~~~l~~~~~ 659 (668)
T PLN02260 625 VIVAPRSNNEMDASKLKKEF--PE-LLSIKESLIKYVF 659 (668)
T ss_pred HhhCCCccccccHHHHHHhC--cc-ccchHHHHHHHHh
Confidence 1111223379999999998 99 8899999998875
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-28 Score=233.40 Aligned_cols=228 Identities=18% Similarity=0.229 Sum_probs=179.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc--C
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY--K 59 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~--~ 59 (358)
|.++|+||||||||+||++++++|+++|++ ... ....++++.+|++|++++.+++++. +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 456789999999999999999999999983 111 1124667899999999999999864 5
Q ss_pred CcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
+|+||||++... ......+++|+.++.+++++|++.++++||++||.++++. .. .
T Consensus 137 ~D~Vi~~aa~~~------~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p------------------~~-~ 191 (390)
T PLN02657 137 VDVVVSCLASRT------GGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKP------------------LL-E 191 (390)
T ss_pred CcEEEECCccCC------CCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCc------------------ch-H
Confidence 999999987532 1223456789999999999999999999999999987531 12 5
Q ss_pred hHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
|..+|...|+.+.. ..++++++++||+.+||+.. .++. .+..
T Consensus 192 ~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~-----------~~~~----~~~~--------------------- 233 (390)
T PLN02657 192 FQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG-----------GQVE----IVKD--------------------- 233 (390)
T ss_pred HHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH-----------HHHH----hhcc---------------------
Confidence 88999999998865 34689999999999997421 1222 2223
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCcee-eeeeHHHHHHHHHHHHHhcCCCCCceEEccCC-CcccHHHHHHHHHH
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLR-QFIYSLDLARLFIWVLREYDSVEPIILSVDEK-DEVTIAEVAEAIAN 297 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~-~~~s~~ei~~~i~~ 297 (358)
|.++.++++++..+ ++||++|+|+++..++.++...+ ++||++++ +.+|+.|+++.+.+
T Consensus 234 ------------------g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~~~-~~~~Iggp~~~~S~~Eia~~l~~ 294 (390)
T PLN02657 234 ------------------GGPYVMFGDGKLCACKPISEADLASFIADCVLDESKIN-KVLPIGGPGKALTPLEQGEMLFR 294 (390)
T ss_pred ------------------CCceEEecCCcccccCceeHHHHHHHHHHHHhCccccC-CEEEcCCCCcccCHHHHHHHHHH
Confidence 77888888887644 57999999999999997654433 58999986 58999999999999
Q ss_pred HhCCCcceeecCC
Q psy7590 298 AFQFKGRITFDTN 310 (358)
Q Consensus 298 ~~g~~~~i~~~~~ 310 (358)
.+|++.++...+.
T Consensus 295 ~lG~~~~~~~vp~ 307 (390)
T PLN02657 295 ILGKEPKFFKVPI 307 (390)
T ss_pred HhCCCCceEEcCH
Confidence 9998877765543
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-28 Score=220.51 Aligned_cols=234 Identities=22% Similarity=0.276 Sum_probs=171.3
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc-----------------------CCCCce-eeecccccCCCHHHHHHHHhccCCcE
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR-----------------------DDETWI-FVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~-----------------------~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
||||||+|.||+.|+++|++.+.. ...+.. .+..+.+|++|.+.+..+++.++||+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 799999999999999999998752 112222 23456899999999999999889999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
|||.||..+. ...+.+|.+..+.|+.||+|++++|.++++++||++||..+ .+|.+ .||.
T Consensus 81 VfHaAA~KhV-pl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA------------------v~Ptn-vmGa 140 (293)
T PF02719_consen 81 VFHAAALKHV-PLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA------------------VNPTN-VMGA 140 (293)
T ss_dssp EEE------H-HHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC------------------SS--S-HHHH
T ss_pred EEEChhcCCC-ChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc------------------CCCCc-HHHH
Confidence 9999998663 24567999999999999999999999999999999999753 45667 7999
Q ss_pred HHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 143 AKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
||+.+|+++..++... +.+++++|+|+|.|+. ++++|.|..++. +
T Consensus 141 tKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-------GSVip~F~~Qi~----~--------------------- 188 (293)
T PF02719_consen 141 TKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-------GSVIPLFKKQIK----N--------------------- 188 (293)
T ss_dssp HHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-------TSCHHHHHHHHH----T---------------------
T ss_pred HHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-------CcHHHHHHHHHH----c---------------------
Confidence 9999999999998876 6899999999999985 367777766654 3
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
|.|+.+. +++..|-|+.+++++..++.++..... +++|-+--+.++++.|+++.+.+.+
T Consensus 189 ------------------g~PlTvT-~p~mtRffmti~EAv~Lvl~a~~~~~~--geifvl~mg~~v~I~dlA~~~i~~~ 247 (293)
T PF02719_consen 189 ------------------GGPLTVT-DPDMTRFFMTIEEAVQLVLQAAALAKG--GEIFVLDMGEPVKILDLAEAMIELS 247 (293)
T ss_dssp ------------------TSSEEEC-ETT-EEEEE-HHHHHHHHHHHHHH--T--TEEEEE---TCEECCCHHHHHHHHT
T ss_pred ------------------CCcceeC-CCCcEEEEecHHHHHHHHHHHHhhCCC--CcEEEecCCCCcCHHHHHHHHHhhc
Confidence 8899876 567778899999999999999987543 3488887789999999999999999
Q ss_pred CC------CcceeecCCCCC
Q psy7590 300 QF------KGRITFDTNAAD 313 (358)
Q Consensus 300 g~------~~~i~~~~~~~~ 313 (358)
|. ..++.+...+++
T Consensus 248 g~~~~~~~~i~I~~~GlRpG 267 (293)
T PF02719_consen 248 GLEPGKKPDIPIKFTGLRPG 267 (293)
T ss_dssp T-EEEESSSS-EEE----TT
T ss_pred ccccccCCCcceEEcCCCCC
Confidence 75 445566555554
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=225.02 Aligned_cols=237 Identities=21% Similarity=0.210 Sum_probs=195.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc--------------------CCCCceeeecccccCCCHHHHHHHHhccCCcE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR--------------------DDETWIFVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~--------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
..|+||||||+|-+|+.+++++++.+.. .......+..+-+|+.|.+.+..++++++||+
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 4689999999999999999999998762 11112344556899999999999999999999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
|||.||..+. .-.+.+|.+..+.|+.||.|++++|.++++++||.+||.. ..+|.| .||.
T Consensus 329 VfHAAA~KHV-Pl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK------------------AV~PtN-vmGa 388 (588)
T COG1086 329 VFHAAALKHV-PLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK------------------AVNPTN-VMGA 388 (588)
T ss_pred EEEhhhhccC-cchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc------------------ccCCch-HhhH
Confidence 9999998764 3556899999999999999999999999999999999974 455677 7999
Q ss_pred HHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 143 AKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
||+++|+.+..+++.. +..++.+|+|||.|+. ++++|-|..++. +
T Consensus 389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-------GSViPlFk~QI~----~--------------------- 436 (588)
T COG1086 389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-------GSVIPLFKKQIA----E--------------------- 436 (588)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-------CCCHHHHHHHHH----c---------------------
Confidence 9999999999997743 3899999999999995 357776665554 4
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
|.|+++. +++..|=|+.+.|.++.++.+...... +.+|-+--|+++++.|+++.+.+.+
T Consensus 437 ------------------GgplTvT-dp~mtRyfMTI~EAv~LVlqA~a~~~g--GeifvldMGepvkI~dLAk~mi~l~ 495 (588)
T COG1086 437 ------------------GGPLTVT-DPDMTRFFMTIPEAVQLVLQAGAIAKG--GEIFVLDMGEPVKIIDLAKAMIELA 495 (588)
T ss_pred ------------------CCCcccc-CCCceeEEEEHHHHHHHHHHHHhhcCC--CcEEEEcCCCCeEHHHHHHHHHHHh
Confidence 8899875 677788899999999999999987433 3489888889999999999999999
Q ss_pred C----CCcceeecCCCC
Q psy7590 300 Q----FKGRITFDTNAA 312 (358)
Q Consensus 300 g----~~~~i~~~~~~~ 312 (358)
| ..+++.+...++
T Consensus 496 g~~~~~dI~I~~~GlRp 512 (588)
T COG1086 496 GQTPPGDIAIKIIGLRP 512 (588)
T ss_pred CCCCCCCCCeEEEecCC
Confidence 7 333455444444
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-26 Score=220.44 Aligned_cols=244 Identities=16% Similarity=0.182 Sum_probs=174.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHccc--------cCCC------C--------------c--eeeecccccCCCH------H
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEK--------RDDE------T--------------W--IFVSSKEADLSNL------E 49 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~--------~~~~------~--------------~--~~~~~~~~Dl~~~------~ 49 (358)
+|||||||||+|++|+++|+++|+ |... + . ..+..+.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 589999999999999999999983 1111 0 0 3466778998754 4
Q ss_pred HHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 50 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
.+..+.. ++|+|||+|+... ...+...+.+.|+.++.+++++|.+.++++|||+||.++|+.....+..|+++.
T Consensus 81 ~~~~~~~--~~d~vih~a~~~~----~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~ 154 (367)
T TIGR01746 81 EWERLAE--NVDTIVHNGALVN----WVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAI 154 (367)
T ss_pred HHHHHHh--hCCEEEeCCcEec----cCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccc
Confidence 5666665 6999999999764 224556778899999999999999999989999999999986543334444422
Q ss_pred CCC-CCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcc
Q psy7590 130 NGP-PHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESR 208 (358)
Q Consensus 130 ~~~-~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (358)
... ..+.+ .|+.+|+.+|.+++.+.+. |++++++||+.++|+.......... ++..++.....
T Consensus 155 ~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~----~~~~~~~~~~~---------- 218 (367)
T TIGR01746 155 VTPPPGLAG-GYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSD----ILWRMVKGCLA---------- 218 (367)
T ss_pred cccccccCC-ChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchh----HHHHHHHHHHH----------
Confidence 111 12233 7999999999999887665 9999999999999984432211112 22222222111
Q ss_pred cCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCC-ceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcc
Q psy7590 209 ARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGK-PLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEV 286 (358)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~ 286 (358)
... +.... ...+|+|++|++++++.++.++.. ..+++||++++.++
T Consensus 219 -----------------------------~~~---~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~ 266 (367)
T TIGR01746 219 -----------------------------LGA---YPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPV 266 (367)
T ss_pred -----------------------------hCC---CCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCC
Confidence 111 11222 256799999999999999877543 12458999999999
Q ss_pred cHHHHHHHHHHHhCCCcc
Q psy7590 287 TIAEVAEAIANAFQFKGR 304 (358)
Q Consensus 287 s~~ei~~~i~~~~g~~~~ 304 (358)
++.|+++.+.+ +|.+.+
T Consensus 267 s~~e~~~~i~~-~g~~~~ 283 (367)
T TIGR01746 267 SLDEFLEWLER-AGYNLK 283 (367)
T ss_pred CHHHHHHHHHH-cCCCCC
Confidence 99999999999 887654
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-26 Score=202.59 Aligned_cols=274 Identities=17% Similarity=0.226 Sum_probs=196.0
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------CCCCc-eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcc-cccc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------DDETW-IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLF-HNMS 78 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~-~~~~ 78 (358)
|+|||||||||++|+..|.+.||. ...+. ... ..-+..-+.+.+..+. ++|+|||+||..-... ++..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---~~~v~~~~~~~~~~~~-~~DavINLAG~~I~~rrWt~~ 76 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---HPNVTLWEGLADALTL-GIDAVINLAGEPIAERRWTEK 76 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---CccccccchhhhcccC-CCCEEEECCCCccccccCCHH
Confidence 689999999999999999999983 11111 111 1111233445555553 5999999999644322 5666
Q ss_pred chhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~ 156 (358)
..+.+++..+..|+.|.++..+. +++.+|..|..+.||++.+..++|++ ++. .. .-++....-|+....+ +
T Consensus 77 ~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~----~~g-~~-Fla~lc~~WE~~a~~a-~ 149 (297)
T COG1090 77 QKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEES----PPG-DD-FLAQLCQDWEEEALQA-Q 149 (297)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCC----CCC-CC-hHHHHHHHHHHHHhhh-h
Confidence 78889999999999999999954 57789999999999999889999996 222 22 4566666666666554 4
Q ss_pred hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccC
Q psy7590 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFT 236 (358)
Q Consensus 157 ~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (358)
..|.++|++|.++|.|+.... ++.++. .++ .+
T Consensus 150 ~~gtRvvllRtGvVLs~~GGa-------L~~m~~-~fk----------------------------------------~g 181 (297)
T COG1090 150 QLGTRVVLLRTGVVLSPDGGA-------LGKMLP-LFK----------------------------------------LG 181 (297)
T ss_pred hcCceEEEEEEEEEecCCCcc-------hhhhcc-hhh----------------------------------------hc
Confidence 569999999999999986542 222221 111 11
Q ss_pred CCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCC----C
Q psy7590 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNA----A 312 (358)
Q Consensus 237 ~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~----~ 312 (358)
-|.+ .|+|.+.++|||++|+++++.+++++..-.+ +||++++.+++.+++.+++.+.+++|..+..-... .
T Consensus 182 lGG~---~GsGrQ~~SWIhieD~v~~I~fll~~~~lsG--p~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~L 256 (297)
T COG1090 182 LGGK---LGSGRQWFSWIHIEDLVNAILFLLENEQLSG--PFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLL 256 (297)
T ss_pred cCCc---cCCCCceeeeeeHHHHHHHHHHHHhCcCCCC--cccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHh
Confidence 1444 4899999999999999999999999966554 59999999999999999999999977654421110 0
Q ss_pred C-----CccccccchHHHHhhhCCCCcc--ccHHHHHHHHHH
Q psy7590 313 D-----GQLKKTASNRKLRELRGPGFEF--TPFQQAVQESVA 347 (358)
Q Consensus 313 ~-----~~~~~~~~~~k~~~~l~~G~~~--~~~~~~l~~~~~ 347 (358)
+ -......-..|+.+. ||++ .+++++|++.+.
T Consensus 257 Ge~a~~lL~gQrvlP~kl~~a---GF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 257 GEMADLLLGGQRVLPKKLEAA---GFQFQYPDLEEALADILK 295 (297)
T ss_pred hhhHHHHhccchhhHHHHHHC---CCeeecCCHHHHHHHHHh
Confidence 1 111233445667666 9884 499999998775
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.1e-24 Score=213.45 Aligned_cols=248 Identities=11% Similarity=0.099 Sum_probs=175.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc---------CCC--------------------------------Cceeeeccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR---------DDE--------------------------------TWIFVSSKE 42 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~---------~~~--------------------------------~~~~~~~~~ 42 (358)
.++|||||||||||++|++.|++.+.. ... ....+..+.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 478999999999999999999976431 000 012355678
Q ss_pred ccCCCH------HHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeecccee
Q psy7590 43 ADLSNL------ESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIF 115 (358)
Q Consensus 43 ~Dl~~~------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy 115 (358)
+|++++ +..+.+.+ ++|+|||+|+... ...++....++|+.++.+|+++|++.+ +++|||+||++||
T Consensus 199 GDl~d~~LGLs~~~~~~L~~--~vDiVIH~AA~v~----f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy 272 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAK--EVDVIINSAANTT----FDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN 272 (605)
T ss_pred eeCCCcccCCCHHHHHHHHh--cCCEEEECccccc----cccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence 999987 34455555 5999999999875 235688899999999999999999874 7899999999999
Q ss_pred cCCCCCCCccccccC----------------------------------C--------------------CCCC-CCcch
Q psy7590 116 PDKTTYPIDETMVHN----------------------------------G--------------------PPHP-SNFGY 140 (358)
Q Consensus 116 ~~~~~~~~~E~~~~~----------------------------------~--------------------~~~p-~~~~Y 140 (358)
|+..+ .+.|..... . ...+ ++ .|
T Consensus 273 G~~~G-~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pN-tY 350 (605)
T PLN02503 273 GQRQG-RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQD-TY 350 (605)
T ss_pred cCCCC-eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCC-hH
Confidence 87631 222221100 0 0011 24 69
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
..+|.++|.+++++. .+++++|+||+.|.+....|. |+|++...
T Consensus 351 t~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~-------pGw~d~~~--------------------------- 394 (605)
T PLN02503 351 VFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPF-------PGWMEGNR--------------------------- 394 (605)
T ss_pred HHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCc-------cccccCcc---------------------------
Confidence 999999999998654 379999999999977655543 23332200
Q ss_pred CccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcC-C--CCCceEEccCC--CcccHHHHHHHH
Q psy7590 221 DKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYD-S--VEPIILSVDEK--DEVTIAEVAEAI 295 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~--~~~~v~n~~~~--~~~s~~ei~~~i 295 (358)
..+|..+.. + .|.--.++++++...|+|+||.++.+++.++.... . ....+||++++ +++++.++.+.+
T Consensus 395 ---~~~p~~~~~--g-~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~ 468 (605)
T PLN02503 395 ---MMDPIVLYY--G-KGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLL 468 (605)
T ss_pred ---ccchhhhhe--e-ccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHH
Confidence 011111111 1 14333367888999999999999999999854321 1 13469999988 899999999999
Q ss_pred HHHhCC
Q psy7590 296 ANAFQF 301 (358)
Q Consensus 296 ~~~~g~ 301 (358)
.+.+..
T Consensus 469 ~~~~~~ 474 (605)
T PLN02503 469 YEHYKS 474 (605)
T ss_pred HHHHhh
Confidence 988754
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-24 Score=195.54 Aligned_cols=205 Identities=21% Similarity=0.204 Sum_probs=121.8
Q ss_pred EEcCCChhHHHHHHHHHHccc--c------CC---------------C---------CceeeecccccCCCH------HH
Q psy7590 9 VTGGTGLVGKAIEKIVKEEEK--R------DD---------------E---------TWIFVSSKEADLSNL------ES 50 (358)
Q Consensus 9 ItGatG~lG~~l~~~L~~~g~--~------~~---------------~---------~~~~~~~~~~Dl~~~------~~ 50 (358)
|||||||||++|+++|++++. + .. . ....+..+.||++.+ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999875 2 00 0 133556679999875 45
Q ss_pred HHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCC------Cc
Q psy7590 51 TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYP------ID 124 (358)
Q Consensus 51 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~------~~ 124 (358)
+..+.+ ++|+|||||+.++ ...+...+.+.|+.||++|++.|.+.+.++|+|+||..+.+...... ..
T Consensus 81 ~~~L~~--~v~~IiH~Aa~v~----~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~ 154 (249)
T PF07993_consen 81 YQELAE--EVDVIIHCAASVN----FNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEE 154 (249)
T ss_dssp HHHHHH--H--EEEE--SS-S----BS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH
T ss_pred hhcccc--ccceeeecchhhh----hcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccc
Confidence 666666 4999999999876 33466678999999999999999987777999999965555443211 11
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccch
Q psy7590 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSV 204 (358)
Q Consensus 125 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (358)
+.. ........+ +|.+||+.+|++++++.++.|++++|+||+.|+|...........+++.++...+. .
T Consensus 155 ~~~-~~~~~~~~~-gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~---~------ 223 (249)
T PF07993_consen 155 EDD-LDPPQGFPN-GYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIA---L------ 223 (249)
T ss_dssp --E-EE--TTSEE--HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHH---H------
T ss_pred ccc-chhhccCCc-cHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHH---c------
Confidence 111 111233334 89999999999999998888999999999999995554443333434444443332 2
Q ss_pred hhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHH
Q psy7590 205 FESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLF 263 (358)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~ 263 (358)
|....+.++.....|+++||.+|++|
T Consensus 224 ---------------------------------~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 224 ---------------------------------GAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp ----------------------------------EEES-SB---TT--EEEHHHHHHHH
T ss_pred ---------------------------------CCcccccCCCCceEeEECHHHHHhhC
Confidence 43333555555679999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-22 Score=207.09 Aligned_cols=227 Identities=15% Similarity=0.115 Sum_probs=159.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC--CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE--TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN 76 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 76 (358)
||||||||+||||++|++.|+++|++ ... ....++++.+|++++. +.+++. ++|+|||+|+...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~-l~~al~--~~D~VIHLAa~~~----- 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDALDPRVDYVCASLRNPV-LQELAG--EADAVIHLAPVDT----- 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcccCCceEEEccCCCHH-HHHHhc--CCCEEEEcCccCc-----
Confidence 48999999999999999999999974 111 1124567789999985 777777 5999999998642
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy7590 77 MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156 (358)
Q Consensus 77 ~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~ 156 (358)
.. ...+|+.++.+++++|+++++ ++||+||. +|+. . .|. .+|.++..
T Consensus 73 -~~---~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~------------------~-~~~----~aE~ll~~--- 119 (699)
T PRK12320 73 -SA---PGGVGITGLAHVANAAARAGA-RLLFVSQA--AGRP------------------E-LYR----QAETLVST--- 119 (699)
T ss_pred -cc---hhhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCC------------------c-ccc----HHHHHHHh---
Confidence 11 125799999999999999998 79999986 3321 0 132 35666543
Q ss_pred hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccC
Q psy7590 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFT 236 (358)
Q Consensus 157 ~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (358)
++++++++|++++||+..... ...++..++....+
T Consensus 120 -~~~p~~ILR~~nVYGp~~~~~------~~r~I~~~l~~~~~-------------------------------------- 154 (699)
T PRK12320 120 -GWAPSLVIRIAPPVGRQLDWM------VCRTVATLLRSKVS-------------------------------------- 154 (699)
T ss_pred -cCCCEEEEeCceecCCCCccc------HhHHHHHHHHHHHc--------------------------------------
Confidence 468999999999999964321 12233333332222
Q ss_pred CCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCCCCcc
Q psy7590 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQL 316 (358)
Q Consensus 237 ~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~ 316 (358)
++++. ++|++|++++++.++++.. . ++||+++++.+|+.|+++.+..... ...+. ...+..
T Consensus 155 -~~pI~----------vIyVdDvv~alv~al~~~~--~-GiyNIG~~~~~Si~el~~~i~~~~p-~~~~~----~~~~~~ 215 (699)
T PRK12320 155 -ARPIR----------VLHLDDLVRFLVLALNTDR--N-GVVDLATPDTTNVVTAWRLLRSVDP-HLRTR----RVRSWE 215 (699)
T ss_pred -CCceE----------EEEHHHHHHHHHHHHhCCC--C-CEEEEeCCCeeEHHHHHHHHHHhCC-Ccccc----ccccHH
Confidence 44544 4899999999999997632 2 3899999999999999999977632 11111 122233
Q ss_pred ccccchHHHHhhhCCCCccc-cH
Q psy7590 317 KKTASNRKLRELRGPGFEFT-PF 338 (358)
Q Consensus 317 ~~~~~~~k~~~~l~~G~~~~-~~ 338 (358)
....+....+..+ +|+|+ +|
T Consensus 216 ~~~pdi~~a~~~~--~w~~~~~~ 236 (699)
T PRK12320 216 QLIPEVDIAAVQE--DWNFEFGW 236 (699)
T ss_pred HhCCCCchhhhhc--CCCCcchH
Confidence 4456667777777 99866 44
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-23 Score=192.69 Aligned_cols=246 Identities=18% Similarity=0.156 Sum_probs=168.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------CC--CCceeeecccccCCCHHHHHHHHhc----cC-CcEEEEcccccCC
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------DD--ETWIFVSSKEADLSNLESTQQLFSK----YK-PTHVIHLAAMVGG 72 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~~--~~~~~~~~~~~Dl~~~~~~~~~~~~----~~-~d~Vih~a~~~~~ 72 (358)
+||||||||++|++++++|++.|++ +. .....++.+.+|+.|++++.++++. .+ +|.|+|+++...
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~- 79 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIP- 79 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCC-
Confidence 4999999999999999999999984 22 1223455678999999999999942 25 899999876421
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
. ....+.+++++|+++|++||||+||..++... + .+...|++++
T Consensus 80 -----~--------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~----------------~-------~~~~~~~~l~ 123 (285)
T TIGR03649 80 -----D--------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG----------------P-------AMGQVHAHLD 123 (285)
T ss_pred -----C--------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC----------------c-------hHHHHHHHHH
Confidence 1 02355689999999999999999987553110 0 1122344432
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
. ..|++++++||+++++..... + ....+.+
T Consensus 124 ~---~~gi~~tilRp~~f~~~~~~~----------~---~~~~~~~---------------------------------- 153 (285)
T TIGR03649 124 S---LGGVEYTVLRPTWFMENFSEE----------F---HVEAIRK---------------------------------- 153 (285)
T ss_pred h---ccCCCEEEEeccHHhhhhccc----------c---ccccccc----------------------------------
Confidence 2 148999999999888542110 0 0011111
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCC
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAA 312 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~ 312 (358)
+..+. .+.++..++||+++|+|+++..++.++...+ ++|++.+++.+|+.|+++.+.+.+|++++....+...
T Consensus 154 -----~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~-~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~ 226 (285)
T TIGR03649 154 -----ENKIY-SATGDGKIPFVSADDIARVAYRALTDKVAPN-TDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTEEE 226 (285)
T ss_pred -----CCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCcCC-CeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCHHH
Confidence 22333 3456777899999999999999998764443 4799999999999999999999999987655432210
Q ss_pred --------CCcc----------------ccccchHHHHhhhCCCCccccHHHHHHHHHH
Q psy7590 313 --------DGQL----------------KKTASNRKLRELRGPGFEFTPFQQAVQESVA 347 (358)
Q Consensus 313 --------~~~~----------------~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~ 347 (358)
+... .....+..+++.+ |.+|++|++-+++..+
T Consensus 227 ~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--G~~p~~~~~~~~~~~~ 283 (285)
T TIGR03649 227 LAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVT--GSKPRGFRDFAESNKA 283 (285)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHh--CcCCccHHHHHHHhhh
Confidence 0000 0011245556777 8888898888877643
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-23 Score=177.34 Aligned_cols=296 Identities=15% Similarity=0.163 Sum_probs=221.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHc-ccc---------C-CCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEE-EKR---------D-DETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~-g~~---------~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
..+|||||+-|.+|..+++.|..+ |.. + ......-+++..|+.|...++++.-+.++|++||..+..+.
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALLSA 123 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALLSA 123 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcccCCchhhhhhccccHHHhhcccccceeeeHHHHHHH
Confidence 358999999999999999999876 432 1 12233346779999999999999988899999999987653
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
..+.+-....++|+.|..|+++.|++++.+-|| -||.++||.+.+..-+.+-. -..|.. .||.||..+|.+-+
T Consensus 124 --vGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFV-PSTIGAFGPtSPRNPTPdlt---IQRPRT-IYGVSKVHAEL~GE 196 (366)
T KOG2774|consen 124 --VGETNVPLALQVNIRGVHNILQVAAKHKLKVFV-PSTIGAFGPTSPRNPTPDLT---IQRPRT-IYGVSKVHAELLGE 196 (366)
T ss_pred --hcccCCceeeeecchhhhHHHHHHHHcCeeEee-cccccccCCCCCCCCCCCee---eecCce-eechhHHHHHHHHH
Confidence 345677788999999999999999999986444 88899999876554443331 344544 89999999999999
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
.+..+.|+++-++|.+.+.........++.. .+..+.++..
T Consensus 197 y~~hrFg~dfr~~rfPg~is~~~pgggttdy----a~A~f~~Al~----------------------------------- 237 (366)
T KOG2774|consen 197 YFNHRFGVDFRSMRFPGIISATKPGGGTTDY----AIAIFYDALQ----------------------------------- 237 (366)
T ss_pred HHHhhcCccceecccCcccccCCCCCCcchh----HHHHHHHHHH-----------------------------------
Confidence 9999999999999988887764332222211 2222333322
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCC
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNA 311 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~ 311 (358)
+.+...+-.++.+.++.|..||-++++.++..+.. ..+++||+. +.+.|..|++..+.++.. ..++.+.+..
T Consensus 238 -----~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt-~~sftpee~~~~~~~~~p-~~~i~y~~~s 310 (366)
T KOG2774|consen 238 -----KGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVT-GFSFTPEEIADAIRRVMP-GFEIDYDICT 310 (366)
T ss_pred -----cCCcccccCCCccCceeehHHHHHHHHHHHhCCHHHhhhheeeec-eeccCHHHHHHHHHhhCC-Cceeecccch
Confidence 33445666788889999999999999999987644 456799986 589999999999999986 4566665432
Q ss_pred ---CCCccccccchHHHHhhhCCCCc-cccHHHHHHHHHHHHHHhhc
Q psy7590 312 ---ADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAWFRENHS 354 (358)
Q Consensus 312 ---~~~~~~~~~~~~k~~~~l~~G~~-~~~~~~~l~~~~~~~~~~~~ 354 (358)
..+.+...+|.+.++++. .|+ ...+-..+.-+++-.+.+.+
T Consensus 311 rq~iad~wp~~~dds~ar~~w--h~~h~~~l~~~i~~~i~~~~~n~~ 355 (366)
T KOG2774|consen 311 RQSIADSWPMSLDDSEARTEW--HEKHSLHLLSIISTVVAVHKSNLK 355 (366)
T ss_pred hhhhhhhcccccCchhHhhHH--HHhhhhhHHHHHHHHHHHHHhhhh
Confidence 335667788999999988 887 44676667777766655544
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-22 Score=221.02 Aligned_cols=245 Identities=16% Similarity=0.128 Sum_probs=172.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc----c------cCCCC---------------------ceeeecccccCCC-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE----K------RDDET---------------------WIFVSSKEADLSN----- 47 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g----~------~~~~~---------------------~~~~~~~~~Dl~~----- 47 (358)
.++|||||||||+|++|++.|++++ + |.... ...+.++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 3689999999999999999999876 2 11000 1235667899874
Q ss_pred -HHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC-------
Q psy7590 48 -LESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT------- 119 (358)
Q Consensus 48 -~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~------- 119 (358)
.+.+.++.. ++|+|||+|+... ...+...+...|+.++.+++++|.+.++++|+|+||.++|+...
T Consensus 1051 ~~~~~~~l~~--~~d~iiH~Aa~~~----~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~ 1124 (1389)
T TIGR03443 1051 SDEKWSDLTN--EVDVIIHNGALVH----WVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDE 1124 (1389)
T ss_pred CHHHHHHHHh--cCCEEEECCcEec----CccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhh
Confidence 455666655 5999999999864 22344556678999999999999999999999999999996421
Q ss_pred -----CCCCccccccCC-CCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHH
Q psy7590 120 -----TYPIDETMVHNG-PPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLY 193 (358)
Q Consensus 120 -----~~~~~E~~~~~~-~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~ 193 (358)
...+.|+.+... ...+.+ +|+.||+.+|.++..+.+. |++++++||+.|||+......... .++..++
T Consensus 1125 ~~~~~~~~~~e~~~~~~~~~~~~~-~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~----~~~~~~~ 1198 (1389)
T TIGR03443 1125 LVQAGGAGIPESDDLMGSSKGLGT-GYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTGATNTD----DFLLRML 1198 (1389)
T ss_pred hhhccCCCCCcccccccccccCCC-ChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcCCCCch----hHHHHHH
Confidence 122444432211 222333 7999999999999987664 999999999999999754332222 2333333
Q ss_pred HhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-
Q psy7590 194 DTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS- 272 (358)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~- 272 (358)
..... ...+.+....++|++++|++++++.++.++..
T Consensus 1199 ~~~~~------------------------------------------~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~ 1236 (1389)
T TIGR03443 1199 KGCIQ------------------------------------------LGLIPNINNTVNMVPVDHVARVVVAAALNPPKE 1236 (1389)
T ss_pred HHHHH------------------------------------------hCCcCCCCCccccccHHHHHHHHHHHHhCCccc
Confidence 22211 11122344468999999999999999876532
Q ss_pred CCCceEEccCCCcccHHHHHHHHHHHhCCCc
Q psy7590 273 VEPIILSVDEKDEVTIAEVAEAIANAFQFKG 303 (358)
Q Consensus 273 ~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~ 303 (358)
....+||++++..+++.++++.+.+. |.+.
T Consensus 1237 ~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~ 1266 (1389)
T TIGR03443 1237 SELAVAHVTGHPRIRFNDFLGTLKTY-GYDV 1266 (1389)
T ss_pred CCCCEEEeCCCCCCcHHHHHHHHHHh-CCCC
Confidence 23358999998899999999999764 5543
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-21 Score=180.72 Aligned_cols=182 Identities=19% Similarity=0.175 Sum_probs=137.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc----------------------------CCCCceeeecccccCC------CHHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR----------------------------DDETWIFVSSKEADLS------NLES 50 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~----------------------------~~~~~~~~~~~~~Dl~------~~~~ 50 (358)
++||+||||||+|.+|+.+|+..-.. .......++.+.+|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 47999999999999999999987541 1123445667788887 4467
Q ss_pred HHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCC----CCccc
Q psy7590 51 TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTY----PIDET 126 (358)
Q Consensus 51 ~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~----~~~E~ 126 (358)
+..+.+ .+|.|||+|+.+. ...++..+...||.||..+++.|...++|.|.|+||.+|+...... ..+|+
T Consensus 81 ~~~La~--~vD~I~H~gA~Vn----~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~ 154 (382)
T COG3320 81 WQELAE--NVDLIIHNAALVN----HVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEI 154 (382)
T ss_pred HHHHhh--hcceEEecchhhc----ccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccc
Confidence 777777 4999999999875 4578889999999999999999999999999999999998644322 22233
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHH
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLY 193 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~ 193 (358)
++....-.....+|++||+.+|.+++++... |++++|+||++|.|...+.......++..++..++
T Consensus 155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~ 220 (382)
T COG3320 155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLL 220 (382)
T ss_pred cccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHH
Confidence 3322222222238999999999999999888 99999999999999987554434344444444333
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=171.33 Aligned_cols=289 Identities=17% Similarity=0.123 Sum_probs=217.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc---------------------CC--CCceeeecccccCCCHHHHHHHHhccCCcE
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR---------------------DD--ETWIFVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~---------------------~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
-.||||-||+=|++|+..|++.||. .+ .+........+|++|...+.+++...+|+-
T Consensus 30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPtE 109 (376)
T KOG1372|consen 30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPTE 109 (376)
T ss_pred EEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCchh
Confidence 3599999999999999999999983 11 111234557899999999999999999999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC---CEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV---KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+|+|+.... ..+.+-++..-++...|+.+||+|.+..+. -||...||+..||.-...|-.|.+ |..|.+ +
T Consensus 110 iYnLaAQSHV-kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~T----PFyPRS-P 183 (376)
T KOG1372|consen 110 VYNLAAQSHV-KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETT----PFYPRS-P 183 (376)
T ss_pred hhhhhhhcce-EEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCC----CCCCCC-h
Confidence 9999998652 344455666777888899999999999862 279999999999988888999999 888888 8
Q ss_pred hHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
|+.+|..+--++-.|.+.+++-.|-=...+--.|.+..+ |+.+=+...+..+.- -
T Consensus 184 Ya~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGen-----FVTRKItRsvakI~~--------g------------ 238 (376)
T KOG1372|consen 184 YAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGEN-----FVTRKITRSVAKISL--------G------------ 238 (376)
T ss_pred hHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccc-----hhhHHHHHHHHHhhh--------c------------
Confidence 999999888888888888887666555555555554432 222222222211111 0
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
.+.-...|+-+..|||-|..|.+++++.++++..+.. |-+..++..|.+|+++......
T Consensus 239 ------------------qqe~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d~PdD---fViATge~hsVrEF~~~aF~~i 297 (376)
T KOG1372|consen 239 ------------------QQEKIELGNLSALRDWGHAGDYVEAMWLMLQQDSPDD---FVIATGEQHSVREFCNLAFAEI 297 (376)
T ss_pred ------------------ceeeEEecchhhhcccchhHHHHHHHHHHHhcCCCCc---eEEecCCcccHHHHHHHHHHhh
Confidence 2233345788889999999999999999999976653 6778899999999999999999
Q ss_pred CCCcceeec--------------------CCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHH
Q psy7590 300 QFKGRITFD--------------------TNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAW 348 (358)
Q Consensus 300 g~~~~i~~~--------------------~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~ 348 (358)
|....+.-. -.++..-.....|.+|+++.| ||+|+ .+++.++++++-
T Consensus 298 g~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdasKAk~~L--gW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 298 GEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDASKAKKTL--GWKPKVTFPELVKEMVAS 365 (376)
T ss_pred CcEEeecccccccccccCCceEEEEecccccCcchhhhhcCChHHHHHhh--CCCCccCHHHHHHHHHHh
Confidence 865444311 112222234457899999999 99987 999999999864
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-20 Score=170.99 Aligned_cols=217 Identities=15% Similarity=0.116 Sum_probs=147.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------CceeeecccccCCC-HHHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------TWIFVSSKEADLSN-LESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
||+||||||||++|++|+++|+++|++ ... ....+.++.+|+++ .+.+.+.+.. ++|+|||+++.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~-~~d~vi~~~g~ 95 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGD-DSDAVICATGF 95 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhc-CCCEEEECCCC
Confidence 679999999999999999999999873 111 11236677899998 4667677621 59999999875
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
... .++...++.|..++.++++++.+.++++|||+||.++|+.....+..+.+. ..++.. .|..+|..+|+
T Consensus 96 ~~~-----~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~---~~~~~~-~~~~~k~~~e~ 166 (251)
T PLN00141 96 RRS-----FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYI---FLNLFG-LTLVAKLQAEK 166 (251)
T ss_pred CcC-----CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchh---HHHHHH-HHHHHHHHHHH
Confidence 321 122233567889999999999999999999999999998543322222110 111112 24556888887
Q ss_pred HHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCccc
Q psy7590 150 LNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229 (358)
Q Consensus 150 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (358)
+++. +|++++++||+++++....
T Consensus 167 ~l~~----~gi~~~iirpg~~~~~~~~----------------------------------------------------- 189 (251)
T PLN00141 167 YIRK----SGINYTIVRPGGLTNDPPT----------------------------------------------------- 189 (251)
T ss_pred HHHh----cCCcEEEEECCCccCCCCC-----------------------------------------------------
Confidence 7643 5899999999999976321
Q ss_pred CCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccC---CCcccHHHHHHHHHH
Q psy7590 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE---KDEVTIAEVAEAIAN 297 (358)
Q Consensus 230 ~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~---~~~~s~~ei~~~i~~ 297 (358)
+. +.+.........+|+.+|+|+++..++..+..... ++.+.+ +...++++++..+++
T Consensus 190 --------~~-~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 190 --------GN-IVMEPEDTLYEGSISRDQVAEVAVEALLCPESSYK-VVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred --------ce-EEECCCCccccCcccHHHHHHHHHHHhcChhhcCc-EEEEecCCCCCchhHHHHHHHhhc
Confidence 11 11111111112468999999999999987654333 566665 234788998887764
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.3e-20 Score=169.09 Aligned_cols=230 Identities=13% Similarity=0.082 Sum_probs=157.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC--------CceeeecccccCCCHHHHHHHHhc-----cCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------TWIFVSSKEADLSNLESTQQLFSK-----YKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vih 65 (358)
|+||||||+|+||++|+++|+++|++ ... ....+.++.+|++|.+++.+++.+ .++|+|||
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 58999999999999999999999974 100 011355678999999998887753 25899999
Q ss_pred cccccCCccc---cccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 66 LAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 66 ~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|+....... ...+....+++|+.++.++++++ ++.+.+++|++||...... .|...
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~~~~ 146 (276)
T PRK06482 83 NAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA----------------YPGFS 146 (276)
T ss_pred CCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC----------------CCCCc
Confidence 9997542111 12334568889999999999997 5566789999999754211 11222
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecCcc---cCCCCCCCCCcccchhH-HHHHHHHhhhhcCccchhhcccCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNV---FGPHDNYNLESSHVIPG-LIRKLYDTIEKGKDQSVFESRARF 211 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v---~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 211 (358)
.|+.+|+..|.+++.+++. +|++++++||+.+ ||+...... ....... ....+.+...
T Consensus 147 ~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------------- 211 (276)
T PRK06482 147 LYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGA-PLDAYDDTPVGDLRRALA-------------- 211 (276)
T ss_pred hhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccC-CCccccchhhHHHHHHHh--------------
Confidence 7999999999999888765 5899999999987 554322110 0000000 0111111111
Q ss_pred CCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHH
Q psy7590 212 PPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEV 291 (358)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei 291 (358)
..++.+ +.+++|++++++.++.++... ..||++++...++.|+
T Consensus 212 --------------------------~~~~~~---------~~d~~~~~~a~~~~~~~~~~~--~~~~~g~~~~~~~~~~ 254 (276)
T PRK06482 212 --------------------------DGSFAI---------PGDPQKMVQAMIASADQTPAP--RRLTLGSDAYASIRAA 254 (276)
T ss_pred --------------------------hccCCC---------CCCHHHHHHHHHHHHcCCCCC--eEEecChHHHHHHHHH
Confidence 112211 257899999999999765333 3699999988999988
Q ss_pred HHHHHHHhCCC
Q psy7590 292 AEAIANAFQFK 302 (358)
Q Consensus 292 ~~~i~~~~g~~ 302 (358)
++.+.+.++..
T Consensus 255 ~~~~~~~~~~~ 265 (276)
T PRK06482 255 LSERLAALEAQ 265 (276)
T ss_pred HHHHHHHHHHH
Confidence 88888887643
|
|
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.4e-20 Score=165.65 Aligned_cols=215 Identities=17% Similarity=0.245 Sum_probs=165.5
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------CC----------CCceeeecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------DD----------ETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~~----------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
+-|.|||||+|++++++|.+.|.. .+ ..+-.+-+...|+.|+++++++.+ ...+|||+.|--
T Consensus 64 aTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk--~sNVVINLIGrd 141 (391)
T KOG2865|consen 64 ATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK--HSNVVINLIGRD 141 (391)
T ss_pred EEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH--hCcEEEEeeccc
Confidence 478899999999999999999973 11 112233455789999999999999 589999998853
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHH
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 150 (358)
-+.....+.++|+.+.+.|...|+++|+.|||++|+... ..+..+ -|-++|..+|+.
T Consensus 142 -----~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga-----------------nv~s~S-r~LrsK~~gE~a 198 (391)
T KOG2865|consen 142 -----YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA-----------------NVKSPS-RMLRSKAAGEEA 198 (391)
T ss_pred -----cccCCcccccccchHHHHHHHHHHhhChhheeehhhccc-----------------cccChH-HHHHhhhhhHHH
Confidence 224456688999999999999999999999999999863 333344 599999999999
Q ss_pred HHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccC
Q psy7590 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSL 230 (358)
Q Consensus 151 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (358)
+++.- -+.+|+||+.|||..+. |+..+..-.++
T Consensus 199 Vrdaf----PeAtIirPa~iyG~eDr-----------fln~ya~~~rk-------------------------------- 231 (391)
T KOG2865|consen 199 VRDAF----PEATIIRPADIYGTEDR-----------FLNYYASFWRK-------------------------------- 231 (391)
T ss_pred HHhhC----Ccceeechhhhcccchh-----------HHHHHHHHHHh--------------------------------
Confidence 98742 34899999999999775 34333332222
Q ss_pred CccccCCCceEEEcCCC-CceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCC
Q psy7590 231 FPFCFTGGDEFKVLGTG-KPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQF 301 (358)
Q Consensus 231 ~~~~~~~g~~~~~~~~~-~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~ 301 (358)
=..+++++.| +....-+||-|+|.+|+.++..+...+ .+|.+.++....+.|+++.+-+..-.
T Consensus 232 -------~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~G-ktye~vGP~~yql~eLvd~my~~~~~ 295 (391)
T KOG2865|consen 232 -------FGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMG-KTYEFVGPDRYQLSELVDIMYDMARE 295 (391)
T ss_pred -------cCceeeecCCcceeeccEEEehHHHHHHHhccCccccC-ceeeecCCchhhHHHHHHHHHHHHhh
Confidence 2244455544 234456999999999999999886654 48999999999999999998877643
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.6e-20 Score=159.26 Aligned_cols=142 Identities=27% Similarity=0.358 Sum_probs=113.6
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------CCCC---ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------DDET---WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNM 77 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 77 (358)
|+|+||||++|+.|+++|+++|++ ...+ ...++++.+|+.|++++.+++. ++|+|||+++...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~~~d~~d~~~~~~al~--~~d~vi~~~~~~~------ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEIIQGDLFDPDSVKAALK--GADAVIHAAGPPP------ 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEEESCTTCHHHHHHHHT--TSSEEEECCHSTT------
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccceeeehhhhhhhhhhh--hcchhhhhhhhhc------
Confidence 799999999999999999999983 2222 3467778999999999999999 6999999987643
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh
Q psy7590 78 SHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ 157 (358)
Q Consensus 78 ~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~ 157 (358)
. ....++++++++++++++|+|++||.++|.+.......+.. ..+ . .|...|..+|+.++ .
T Consensus 73 ~--------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~-----~~~-~-~~~~~~~~~e~~~~----~ 133 (183)
T PF13460_consen 73 K--------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDK-----PIF-P-EYARDKREAEEALR----E 133 (183)
T ss_dssp T--------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTC-----GGG-H-HHHHHHHHHHHHHH----H
T ss_pred c--------cccccccccccccccccccceeeeccccCCCCCcccccccc-----cch-h-hhHHHHHHHHHHHH----h
Confidence 1 17788999999999999999999999999865332111111 111 2 68899988888874 3
Q ss_pred cCceEEEEecCcccCCCC
Q psy7590 158 HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 158 ~g~~~~ilRp~~v~G~~~ 175 (358)
++++++++||+.+||+..
T Consensus 134 ~~~~~~ivrp~~~~~~~~ 151 (183)
T PF13460_consen 134 SGLNWTIVRPGWIYGNPS 151 (183)
T ss_dssp STSEEEEEEESEEEBTTS
T ss_pred cCCCEEEEECcEeEeCCC
Confidence 699999999999999963
|
... |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-19 Score=161.61 Aligned_cols=157 Identities=20% Similarity=0.169 Sum_probs=120.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
||+||||||||++|++|+++|+++|++ ... ....+.++.+|+.+++++.++++.. ++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 85 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999999999984 000 0123556789999999999888642 68
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+++...... ...+.....++.|+.++.++++++ ++.+.+++|++||...+...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~--------------- 150 (249)
T PRK12825 86 DILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW--------------- 150 (249)
T ss_pred CEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC---------------
Confidence 99999999643211 122344667899999999999888 45678899999998765321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~ 176 (358)
.+.. .|+.+|...|.+++.+++. .+++++++||+.++++...
T Consensus 151 ~~~~-~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~ 195 (249)
T PRK12825 151 PGRS-NYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKE 195 (249)
T ss_pred CCch-HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccc
Confidence 1122 6999999999988877665 5899999999999998643
|
|
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.8e-19 Score=174.30 Aligned_cols=247 Identities=20% Similarity=0.166 Sum_probs=180.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc---------c--------------------------CCCCceeeecccccCCCH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK---------R--------------------------DDETWIFVSSKEADLSNL 48 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~---------~--------------------------~~~~~~~~~~~~~Dl~~~ 48 (358)
.++|+|||||||+|..|+..|+..-. | .+.....+..+.||+.++
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~ 91 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP 91 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence 46899999999999999999997642 0 222334455668888754
Q ss_pred ------HHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCC---
Q psy7590 49 ------ESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDK--- 118 (358)
Q Consensus 49 ------~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~--- 118 (358)
++++.+.+ .+++|||+||.+. ..+........|..||+++++.|++.. .+.+||+||+++--..
T Consensus 92 ~LGis~~D~~~l~~--eV~ivih~AAtvr----Fde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i 165 (467)
T KOG1221|consen 92 DLGISESDLRTLAD--EVNIVIHSAATVR----FDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHI 165 (467)
T ss_pred ccCCChHHHHHHHh--cCCEEEEeeeeec----cchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccc
Confidence 45554555 5999999999875 346677889999999999999999986 7899999999765211
Q ss_pred CCCC--------------Ccccc---------ccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCC
Q psy7590 119 TTYP--------------IDETM---------VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 119 ~~~~--------------~~E~~---------~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
.+.+ .+|+. +.... ..++ .|..+|+++|.++..+. .+++.+|+||+.|.+...
T Consensus 166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~-~~PN-TYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~ 241 (467)
T KOG1221|consen 166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLG-GWPN-TYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYK 241 (467)
T ss_pred cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcC-CCCC-ceeehHhhHHHHHHhhc--cCCCeEEEcCCceecccc
Confidence 0011 11110 11111 2245 59999999999998753 469999999999999887
Q ss_pred CCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeee
Q psy7590 176 NYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIY 255 (358)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~ 255 (358)
.| +|+|++.+ .||.+++.+++.|.-.- +..+.+...|+|.
T Consensus 242 EP-------~pGWidn~--------------------------------~gp~g~i~g~gkGvlr~-~~~d~~~~adiIP 281 (467)
T KOG1221|consen 242 EP-------FPGWIDNL--------------------------------NGPDGVIIGYGKGVLRC-FLVDPKAVADIIP 281 (467)
T ss_pred CC-------CCCccccC--------------------------------CCCceEEEEeccceEEE-EEEccccccceee
Confidence 65 34566543 36777887777766553 4568888999999
Q ss_pred HHHHHHHHHHHHHhcCC----CCCceEEccCC--CcccHHHHHHHHHHHhC
Q psy7590 256 SLDLARLFIWVLREYDS----VEPIILSVDEK--DEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 256 v~D~a~~~~~~~~~~~~----~~~~v~n~~~~--~~~s~~ei~~~i~~~~g 300 (358)
||.++.+++.+.-.... ....|||++++ .+++++++.+...+.+-
T Consensus 282 vD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 282 VDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHhcc
Confidence 99999999876633211 12359999986 46999999999999875
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-19 Score=160.93 Aligned_cols=155 Identities=16% Similarity=0.074 Sum_probs=116.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++||||||+|+||+++++.|+++|++ ... ....+.++.+|+++++++.+++... ++|
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 86 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD 86 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999974 110 0112445689999999998887642 489
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHH----HHHHHHHH-HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKI----NDNVLDTS-YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~----~~~ll~aa-~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+...... ...+.....+++|+.+ ++++++++ +..+.+++|++||...+.. .
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~---------------~ 151 (262)
T PRK13394 87 ILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA---------------S 151 (262)
T ss_pred EEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC---------------C
Confidence 9999999753211 1223345678899999 77778877 6667889999999754321 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+.. .|+.+|...+.+++.++.+ .++.++++||+.++++.
T Consensus 152 ~~~~-~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~ 194 (262)
T PRK13394 152 PLKS-AYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPL 194 (262)
T ss_pred CCCc-ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence 1122 7999999999998888765 48999999999999875
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-18 Score=158.78 Aligned_cols=156 Identities=20% Similarity=0.216 Sum_probs=115.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
++||||||+|+||++++++|+++|++ .... ...+.++.+|+++.+++.++++.. ++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRL 86 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999874 1100 113456789999999999888752 58
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|+|||+|+...... ...++....++.|+.++.++++++... .-..++++|+.. + .. +..
T Consensus 87 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~--~---------~~----~~~ 151 (249)
T PRK09135 87 DALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH--A---------ER----PLK 151 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh--h---------cC----CCC
Confidence 99999999643211 122345678999999999999999642 122455555422 1 11 334
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~ 176 (358)
+.. .|+.+|...|.+++.++.+. +++++++||+.++|+...
T Consensus 152 ~~~-~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~ 194 (249)
T PRK09135 152 GYP-VYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDG 194 (249)
T ss_pred Cch-hHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcccc
Confidence 444 79999999999999988765 599999999999999753
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-19 Score=162.80 Aligned_cols=217 Identities=17% Similarity=0.193 Sum_probs=149.7
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------CCC-------CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------DDE-------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|+|+||||.+|+++++.|++.+++ +.. ...+++.+.+|+.|++++.++|+ ++|+||.+.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~--g~d~v~~~~~~~~-- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALK--GVDAVFSVTPPSH-- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHT--TCSEEEEESSCSC--
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHc--CCceEEeecCcch--
Confidence 799999999999999999998873 111 11345667999999999999999 6999997766431
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
........++++||+++|+++||+.|....+.. .. ...|.. .....|...|+.+++
T Consensus 77 -----------~~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~~--------~~----~~~p~~-~~~~~k~~ie~~l~~ 132 (233)
T PF05368_consen 77 -----------PSELEQQKNLIDAAKAAGVKHFVPSSFGADYDE--------SS----GSEPEI-PHFDQKAEIEEYLRE 132 (233)
T ss_dssp -----------CCHHHHHHHHHHHHHHHT-SEEEESEESSGTTT--------TT----TSTTHH-HHHHHHHHHHHHHHH
T ss_pred -----------hhhhhhhhhHHHhhhccccceEEEEEecccccc--------cc----cccccc-hhhhhhhhhhhhhhh
Confidence 112556678999999999999997554444311 10 122222 355678888877755
Q ss_pred HHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcc
Q psy7590 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPF 233 (358)
Q Consensus 154 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (358)
.+++++++||+..+... +..+... ..
T Consensus 133 ----~~i~~t~i~~g~f~e~~--------------~~~~~~~-~~----------------------------------- 158 (233)
T PF05368_consen 133 ----SGIPYTIIRPGFFMENL--------------LPPFAPV-VD----------------------------------- 158 (233)
T ss_dssp ----CTSEBEEEEE-EEHHHH--------------HTTTHHT-TC-----------------------------------
T ss_pred ----ccccceeccccchhhhh--------------hhhhccc-cc-----------------------------------
Confidence 59999999998665321 1111100 00
Q ss_pred ccCCCceEEEcCCCCceeeee-eHHHHHHHHHHHHHhcCCC-CCceEEccCCCcccHHHHHHHHHHHhCCCccee
Q psy7590 234 CFTGGDEFKVLGTGKPLRQFI-YSLDLARLFIWVLREYDSV-EPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 234 ~~~~g~~~~~~~~~~~~~~~i-~v~D~a~~~~~~~~~~~~~-~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
...+...+.++++++....++ ..+|+++++..++.++... .++.+.+++ +.+|++|+++.+.+.+|++++..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v~y~ 232 (233)
T PF05368_consen 159 IKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIAAILSKVLGKKVKYV 232 (233)
T ss_dssp SCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHHHHHHHHHTSEEEEE
T ss_pred ccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHHHHHHHHHCCccEEe
Confidence 000123567777877766675 9999999999999997665 455777765 88999999999999999886543
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=171.76 Aligned_cols=219 Identities=16% Similarity=0.159 Sum_probs=149.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------------------ceeeecccccCCCHHHHHHH
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------------------WIFVSSKEADLSNLESTQQL 54 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------------------~~~~~~~~~Dl~~~~~~~~~ 54 (358)
|++.++||||||+|+||++++++|++.|++ ...+ ...+.++.+|+++.+++.++
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 345578999999999999999999999984 1100 01255679999999999998
Q ss_pred HhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 55 FSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 55 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+. ++|+|||++|... ....+....+++|+.++.+++++|.+.+++|||++||.+++.... .+. ...
T Consensus 157 Lg--giDiVVn~AG~~~---~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~----p~~-----~~~ 222 (576)
T PLN03209 157 LG--NASVVICCIGASE---KEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF----PAA-----ILN 222 (576)
T ss_pred hc--CCCEEEEcccccc---ccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc----ccc-----chh
Confidence 88 5999999998643 112234567889999999999999999999999999987632110 000 111
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPG 214 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (358)
.. +.|...|..+|+.+.. +|+++++|||++++++.+.....
T Consensus 223 sk-~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~~t---------------------------------- 263 (576)
T PLN03209 223 LF-WGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET---------------------------------- 263 (576)
T ss_pred hH-HHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCccccccc----------------------------------
Confidence 11 2578888888888753 69999999999998774331100
Q ss_pred CCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHH
Q psy7590 215 ANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEA 294 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~ 294 (358)
+ .+.+..........+.-.|+|++++.++.++......+|.+.++.......+.+.
T Consensus 264 -----------------------~-~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~ 319 (576)
T PLN03209 264 -----------------------H-NLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEEL 319 (576)
T ss_pred -----------------------c-ceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHH
Confidence 0 0000000011112477899999999999876545455888887654333444444
Q ss_pred HH
Q psy7590 295 IA 296 (358)
Q Consensus 295 i~ 296 (358)
+.
T Consensus 320 ~~ 321 (576)
T PLN03209 320 LA 321 (576)
T ss_pred HH
Confidence 44
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-18 Score=155.09 Aligned_cols=155 Identities=19% Similarity=0.144 Sum_probs=114.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++||||||+|+||+++++.|+++|++ ... ....+..+.+|+.+++++.++++.. ++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 358999999999999999999999973 110 0113455689999999887766532 589
Q ss_pred EEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++....... ...+....++.|+.++..+++++ ++.+++++|++||...+...
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~---------------- 144 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS---------------- 144 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC----------------
Confidence 99999997542111 11233556788999988888777 55677899999998654321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...|.+.+.++.+ .+++++++||+.++++.
T Consensus 145 ~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 145 PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 11127999999999998877654 38999999999998874
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-17 Score=155.65 Aligned_cols=158 Identities=15% Similarity=0.109 Sum_probs=118.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC--------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
||.+++||||||+|+||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 1 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 1 MSSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 777789999999999999999999999873 111 0112445689999999998887742 589
Q ss_pred EEEEcccccCCcccc---ccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLFHN---MSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+|+........ .......+++|+.++.++++++. +.+..++|++||...+...
T Consensus 81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~---------------- 144 (277)
T PRK06180 81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM---------------- 144 (277)
T ss_pred EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC----------------
Confidence 999999974321111 12234568999999999999854 3456689999998654321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
|....|+.+|...|.+++.++.. .|++++++||+.+.++.
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 187 (277)
T PRK06180 145 PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDW 187 (277)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCc
Confidence 11227999999999988887654 48999999999998764
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.5e-18 Score=157.26 Aligned_cols=232 Identities=15% Similarity=0.034 Sum_probs=156.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
|| +++||||||+|+||++++++|+++|++ .... ...+.++.+|++|++++.++++.. ++|
T Consensus 1 ~~-~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 1 MM-EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 44 368999999999999999999999873 1100 112345589999999988877642 689
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+|+..... ....++....+++|+.++..+++++ ++.+.+++|++||.+.+...
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------- 143 (275)
T PRK08263 80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF---------------- 143 (275)
T ss_pred EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC----------------
Confidence 999999975321 1123456778999999988777776 55667799999998665422
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARF 211 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (358)
+....|+.+|...+.+.+.++.. +|++++++||+.+..+............+. ...+.....
T Consensus 144 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~-~~~~~~~~~-------------- 208 (275)
T PRK08263 144 PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDA-YDTLREELA-------------- 208 (275)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchh-hhhHHHHHH--------------
Confidence 11226999999999988887664 689999999998876543211100000000 011111000
Q ss_pred CCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeee-eeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHH
Q psy7590 212 PPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQF-IYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAE 290 (358)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~e 290 (358)
+......+ +..+|+|++++.++++..... ..++...+..+++.+
T Consensus 209 ----------------------------------~~~~~~~~~~~p~dva~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 253 (275)
T PRK08263 209 ----------------------------------EQWSERSVDGDPEAAAEALLKLVDAENPPL-RLFLGSGVLDLAKAD 253 (275)
T ss_pred ----------------------------------HHHHhccCCCCHHHHHHHHHHHHcCCCCCe-EEEeCchHHHHHHHH
Confidence 00111234 788999999999998764433 355544556899999
Q ss_pred HHHHHHHHh
Q psy7590 291 VAEAIANAF 299 (358)
Q Consensus 291 i~~~i~~~~ 299 (358)
+.+.+.+.-
T Consensus 254 ~~~~~~~~~ 262 (275)
T PRK08263 254 YERRLATWE 262 (275)
T ss_pred HHHHHHHHH
Confidence 999988763
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.1e-18 Score=153.95 Aligned_cols=159 Identities=19% Similarity=0.151 Sum_probs=116.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
||++++||||||+|++|++++++|+++|++ .... ...+..+.+|+++++++.++++..
T Consensus 1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG 80 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 777789999999999999999999999984 1110 113445689999999998888742
Q ss_pred CCcEEEEcccccCCcc---ccccchhhHHHHHHHH----HHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 59 KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKI----NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~----~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
++|+|||+|+...... .........++.|+.+ ++.+++++++.+.++||++||...+...
T Consensus 81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~------------- 147 (258)
T PRK12429 81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS------------- 147 (258)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-------------
Confidence 6899999998643211 1112334567788888 5555566666778899999998554321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
.+.. .|+.+|...+.+.+.++.+ .++.++++||+.++++..
T Consensus 148 --~~~~-~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~ 191 (258)
T PRK12429 148 --AGKA-AYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLV 191 (258)
T ss_pred --CCcc-hhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence 1122 7999999999888877554 379999999999998753
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.1e-18 Score=154.02 Aligned_cols=161 Identities=16% Similarity=0.083 Sum_probs=121.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
|++.|+||||||+|++|.+|+++|+++|+. ... ....+..+.+|+.|++++.++++..
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 344568999999999999999999999873 100 0112556789999999999988642
Q ss_pred CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 59 KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
++|+|||+++..... ....++....++.|+.++.++++++. +.+.++||++||...++.
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~-------------- 148 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV-------------- 148 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc--------------
Confidence 599999999875421 11223456789999999999999884 455778999999866511
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~ 176 (358)
+..+.. .|+.+|...|.+++.++.. .+++++++||+.++|+...
T Consensus 149 ~~~~~~-~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~ 195 (251)
T PRK12826 149 GYPGLA-HYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAG 195 (251)
T ss_pred CCCCcc-HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhh
Confidence 111122 7999999999999887665 4899999999999998643
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-17 Score=154.08 Aligned_cols=227 Identities=18% Similarity=0.117 Sum_probs=156.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
+.++||||||+|+||+++++.|+++|++ .... ...+.++.+|++|++++.++++..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3479999999999999999999999984 1000 123445678999999998888753
Q ss_pred CCcEEEEcccccCC---c-cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 KPTHVIHLAAMVGG---L-FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 ~~d~Vih~a~~~~~---~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|+|||+|+.... . ....+.....++.|+.++..+++++.+. +..++|++||...+...
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------ 153 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH------------ 153 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC------------
Confidence 68999999985421 0 1122334567889999999999887653 33489999998765321
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhc
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (358)
|....|+.+|...|.+++.++... +++++++||+.+.++....... .......+. .
T Consensus 154 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~----~~~~~~~~~----~--------- 212 (276)
T PRK05875 154 ----RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE----SPELSADYR----A--------- 212 (276)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc----CHHHHHHHH----c---------
Confidence 112279999999999999887654 6999999999886653221000 000111110 0
Q ss_pred ccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCC-CCceEEccCCCcc
Q psy7590 208 RARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSV-EPIILSVDEKDEV 286 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~~v~n~~~~~~~ 286 (358)
..+ ...+++++|+|+++.+++.++... .+++++++++..+
T Consensus 213 ------------------------------~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~ 253 (276)
T PRK05875 213 ------------------------------CTP---------LPRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHML 253 (276)
T ss_pred ------------------------------CCC---------CCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeec
Confidence 111 123578999999999999875432 3468999988776
Q ss_pred ----cHHHHHHHHHHHhCC
Q psy7590 287 ----TIAEVAEAIANAFQF 301 (358)
Q Consensus 287 ----s~~ei~~~i~~~~g~ 301 (358)
+..|+++.+.+..+.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 254 RRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred cCCccHHHHHHHHhhHHHH
Confidence 788888877766543
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4e-17 Score=151.52 Aligned_cols=154 Identities=12% Similarity=0.044 Sum_probs=114.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++|+||||+|+||+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999974 0000 113445679999999998888742 589
Q ss_pred EEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+|+....... ..+.....++.|+.++.++++++.. .+..+||++||...+...
T Consensus 90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~---------------- 153 (274)
T PRK07775 90 VLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR---------------- 153 (274)
T ss_pred EEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC----------------
Confidence 99999997532111 1123445679999999999988753 345689999998766422
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...|.+++.++... |++++++||+.+..+
T Consensus 154 ~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~ 195 (274)
T PRK07775 154 PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG 195 (274)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence 112269999999999999887654 899999999877544
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.3e-17 Score=155.52 Aligned_cols=208 Identities=17% Similarity=0.136 Sum_probs=142.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++||||||+|+||++++++|+++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999999999999974 100 0113445689999999998888742 589
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCC------CEEEEeeccceecCCCCCCCccccc
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGV------KKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v------~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
+|||+|+...... ...++....+++|+.++.++++++ .+++. .++|++||...+...
T Consensus 86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 155 (287)
T PRK06194 86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP---------- 155 (287)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC----------
Confidence 9999999854211 122344567899999999977774 33332 489999998665322
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhcC-----ceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccc
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQHG-----VTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQS 203 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g-----~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (358)
.+.. .|+.+|...|.+++.++...+ +.+..+.|+.+..+ +... ..
T Consensus 156 -----~~~~-~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~---------------~~~~----~~----- 205 (287)
T PRK06194 156 -----PAMG-IYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG---------------IWQS----ER----- 205 (287)
T ss_pred -----CCCc-chHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc---------------cccc----cc-----
Confidence 1112 799999999999998877654 44445555433221 1110 11
Q ss_pred hhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCC
Q psy7590 204 VFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEK 283 (358)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~ 283 (358)
+++..+++++.+.++|++++|++..+...
T Consensus 206 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 234 (287)
T PRK06194 206 ----------------------------------NRPADLANTAPPTRSQLIAQAMSQKAVGS----------------- 234 (287)
T ss_pred ----------------------------------cCchhcccCccccchhhHHHHHHHhhhhc-----------------
Confidence 44556667777788899999988764311
Q ss_pred CcccHHHHHHHHHHHhCCC
Q psy7590 284 DEVTIAEVAEAIANAFQFK 302 (358)
Q Consensus 284 ~~~s~~ei~~~i~~~~g~~ 302 (358)
..++..|+++.+.+.....
T Consensus 235 ~~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 235 GKVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred cCCCHHHHHHHHHHHHHcC
Confidence 0168899999998877543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.7e-17 Score=150.46 Aligned_cols=154 Identities=17% Similarity=0.155 Sum_probs=115.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccC-------CCC-----------ceeeecccccCCCHHHHHHHHhcc--------
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRD-------DET-----------WIFVSSKEADLSNLESTQQLFSKY-------- 58 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~-------~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-------- 58 (358)
++|+||||+|+||++++++|+++|++- ..+ ...+..+.+|++|++++.++++..
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~ 86 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV 86 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence 689999999999999999999998730 000 012446789999999998888742
Q ss_pred ---CCcEEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 ---KPTHVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 ---~~d~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|+|||+|+....... ........+++|+.++.++++++... ...++|++||..++...
T Consensus 87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~------------ 154 (254)
T PRK12746 87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF------------ 154 (254)
T ss_pred CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC------------
Confidence 58999999997542111 11122557789999999999998763 34589999998775421
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+.. .|+.+|...|.+++.++.. .++++++++|+.++++.
T Consensus 155 ---~~~~-~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 155 ---TGSI-AYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred ---CCCc-chHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 1222 6999999999998877664 47999999999998774
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.2e-17 Score=149.92 Aligned_cols=153 Identities=16% Similarity=0.134 Sum_probs=113.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhc-----cC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSK-----YK 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~-----~~ 59 (358)
+++||||||+|++|+++++.|+++|++ .... ...+.++.+|++|++++.+ ++. .+
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence 468999999999999999999999973 1100 1235566899999998876 543 25
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccce-ecCCCCCCCccccccCC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCI-FPDKTTYPIDETMVHNG 131 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~v-y~~~~~~~~~E~~~~~~ 131 (358)
+|+|||+|+...+.. ...+.....+++|+.++.++++++ ++.+..++|++||... ++.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------- 147 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGF-------------- 147 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCC--------------
Confidence 899999998754211 112334567889999988888885 5566779999999743 321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHH---hhcCceEEEEecCcccCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYY---QQHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~---~~~g~~~~ilRp~~v~G~~ 174 (358)
.+.. .|+.+|...|.+++.++ ...|++++++||+.+..+.
T Consensus 148 --~~~~-~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 148 --PGLS-PYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred --CCCc-hhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence 1122 79999999999888876 3458999999999988774
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.9e-17 Score=145.37 Aligned_cols=156 Identities=19% Similarity=0.149 Sum_probs=116.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
+|+||||||+|++|++|++.|+++|++ .... ...+.++.+|+.+++++.++++. .++|
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD 84 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999984 1111 01234557999999998888764 2579
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++...... ...+.....++.|+.++.++++++. +.+++++|++||...... ..
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~---------------~~ 149 (246)
T PRK05653 85 ILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG---------------NP 149 (246)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC---------------CC
Confidence 9999998754211 1122345678899999999998885 456789999999743211 11
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
+.. .|+.+|...|.+++.+++. .++.++++||+.++++..
T Consensus 150 ~~~-~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~ 192 (246)
T PRK05653 150 GQT-NYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMT 192 (246)
T ss_pred CCc-HhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcch
Confidence 122 6999999999988887664 489999999999998854
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.8e-17 Score=149.79 Aligned_cols=221 Identities=18% Similarity=0.143 Sum_probs=153.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC---------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET---------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
+++|||||+|+||.++++.|+++|++ .... ...+..+.+|+.|++++.+++... ++|+||
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLV 82 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 48999999999999999999999873 1110 123456689999999998888642 589999
Q ss_pred EcccccCCccccccc---hhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGLFHNMSH---NLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~~~~~~~---~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+++..........+ .......|+.++.++++++. +.+..++|++||...+.. .. .
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--------------~~---~ 145 (257)
T PRK07074 83 ANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA--------------LG---H 145 (257)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC--------------CC---C
Confidence 999975421111112 23456789999988888883 455678999999643211 00 1
Q ss_pred cchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPG 214 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (358)
..|+.+|...+.+++.++.+. |+++++++|+.+.++....... ..+.+.... .
T Consensus 146 ~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~----~----------------- 201 (257)
T PRK07074 146 PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVA---ANPQVFEEL----K----------------- 201 (257)
T ss_pred cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccc---cChHHHHHH----H-----------------
Confidence 169999999999999887654 7999999999998774321100 001111111 0
Q ss_pred CCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccHHHHHH
Q psy7590 215 ANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTIAEVAE 293 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~~ei~~ 293 (358)
...+.++|++++|++++++.++..... ..+.++++.++...+..|+++
T Consensus 202 -------------------------------~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 250 (257)
T PRK07074 202 -------------------------------KWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMAR 250 (257)
T ss_pred -------------------------------hcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhh
Confidence 011235689999999999999965322 234578888888999999998
Q ss_pred HHHH
Q psy7590 294 AIAN 297 (358)
Q Consensus 294 ~i~~ 297 (358)
.+..
T Consensus 251 ~~~~ 254 (257)
T PRK07074 251 TLTL 254 (257)
T ss_pred hhcc
Confidence 8754
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.6e-18 Score=154.94 Aligned_cols=222 Identities=16% Similarity=0.148 Sum_probs=149.6
Q ss_pred CCC--CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 1 MAE--EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 1 m~~--~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
||. .++||||||+|+||.+|++.|+++|++ ... ....+..+.+|++|++++.++++.. +
T Consensus 1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (257)
T PRK07067 1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGG 80 (257)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 664 358999999999999999999999974 110 0112455689999999998888753 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcC-----CCEEEEeeccc-eecCCCCCCCccccccC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQG-----VKKVVSCLSTC-IFPDKTTYPIDETMVHN 130 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-----v~r~V~~SS~~-vy~~~~~~~~~E~~~~~ 130 (358)
+|++||+|+..... ....++....++.|+.++.++++++.... -.++|++||.. .++.
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------- 147 (257)
T PRK07067 81 IDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE------------- 147 (257)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC-------------
Confidence 89999999864321 11234566789999999999999996532 13799999963 3221
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhc
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (358)
.+.. .|+.+|...+.+++.++.. .|+++++++|+.++++...... ..+..... ...
T Consensus 148 ---~~~~-~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~-------~~~~~~~~-~~~--------- 206 (257)
T PRK07067 148 ---ALVS-HYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVD-------ALFARYEN-RPP--------- 206 (257)
T ss_pred ---CCCc-hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhh-------hhhhhccC-CCH---------
Confidence 1222 7999999999999887763 5899999999999987422100 00000000 000
Q ss_pred ccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcc
Q psy7590 208 RARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEV 286 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~ 286 (358)
+......+...+.+.+++.+|+|+++..++..... ..+.+|++.++..+
T Consensus 207 ------------------------------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~ 256 (257)
T PRK07067 207 ------------------------------GEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGGNWM 256 (257)
T ss_pred ------------------------------HHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence 00001122333456689999999999999976433 23458999877554
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.3e-17 Score=146.77 Aligned_cols=153 Identities=22% Similarity=0.236 Sum_probs=116.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++|+||||+|+||++++++|+++|++ .... ...+..+.+|+++++++.++++.. ++|
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 85 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGID 85 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 368999999999999999999999874 1100 012345689999999988877642 589
Q ss_pred EEEEcccccCCc------cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 62 HVIHLAAMVGGL------FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 62 ~Vih~a~~~~~~------~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
+|||+|+..... ..........++.|+.++.++++++... +.+++|++||...|..
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-------------- 151 (250)
T PRK07774 86 YLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-------------- 151 (250)
T ss_pred EEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC--------------
Confidence 999999974310 1122344567889999999999998864 3468999999876531
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
.+ .|+.+|...|.+++.++++. ++.+++++|+.+..+..
T Consensus 152 ----~~-~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 193 (250)
T PRK07774 152 ----SN-FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT 193 (250)
T ss_pred ----cc-ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence 12 69999999999999987764 79999999988876653
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=150.68 Aligned_cols=157 Identities=19% Similarity=0.084 Sum_probs=113.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhc-----cC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSK-----YK 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~-----~~ 59 (358)
+.++|+||||+|+||++++++|+++|++ .... ...+..+.+|+++++++.++++. .+
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3478999999999999999999999974 1111 01234568999999999887764 25
Q ss_pred CcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
+|+|||+|+... ....++...+++|+.++.++++++.+.- ..++|++||....... ..+. .|..
T Consensus 85 ~d~vi~~ag~~~---~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~----~~~~-------~~~~ 150 (248)
T PRK07806 85 LDALVLNASGGM---ESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP----TVKT-------MPEY 150 (248)
T ss_pred CcEEEECCCCCC---CCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc----cccC-------Cccc
Confidence 899999998643 1223456678899999999999998752 2489999996432110 0111 1112
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...|.+++.++.. .++++++++|+.+-++
T Consensus 151 ~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~ 189 (248)
T PRK07806 151 EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGT 189 (248)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCc
Confidence 27999999999999888654 4788999988766554
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.8e-17 Score=147.43 Aligned_cols=158 Identities=16% Similarity=-0.004 Sum_probs=116.7
Q ss_pred CCC--CCEEEEEcCCChhHHHHHHHHHHccccC----CCC--------------ceeeecccccCCCHHHHHHHHhc---
Q psy7590 1 MAE--EKIILVTGGTGLVGKAIEKIVKEEEKRD----DET--------------WIFVSSKEADLSNLESTQQLFSK--- 57 (358)
Q Consensus 1 m~~--~~~VlItGatG~lG~~l~~~L~~~g~~~----~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~--- 57 (358)
||+ +++||||||+|+||++++++|+++|++. ... ...+..+.+|+++++++..+++.
T Consensus 1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence 665 4699999999999999999999998740 000 01233567999999988887764
Q ss_pred --cCCcEEEEcccccCCcccc---ccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 58 --YKPTHVIHLAAMVGGLFHN---MSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 58 --~~~d~Vih~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
.++|+|||+|+........ .......+++|+.++..+++++.+. ...+||++||...+..
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------- 147 (252)
T PRK06077 81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP------------- 147 (252)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC-------------
Confidence 2689999999964321111 1122467899999999999988864 2348999999876532
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~ 174 (358)
..+.. .|+.+|...|.+++.++++. ++.+.+++|+.+.++.
T Consensus 148 --~~~~~-~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~ 190 (252)
T PRK06077 148 --AYGLS-IYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL 190 (252)
T ss_pred --CCCch-HHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH
Confidence 22233 79999999999999887765 6899999999887653
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.9e-17 Score=147.39 Aligned_cols=156 Identities=20% Similarity=0.216 Sum_probs=116.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+.++++||||+|.+|++|+++|+++|++ .... ...+..+.+|++|++++.++++.. ++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4568999999999999999999999874 1100 112456789999999998887642 699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++...... ...+.....++.|+.++.++.+++ ++.+.+++|++||...+... +
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-------------~-- 148 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG-------------R-- 148 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-------------C--
Confidence 9999999754211 122234556889999987666655 45667799999998543211 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+.. .|+.+|...+.+++.++.+. |++++++||+.++++.
T Consensus 149 ~~~-~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (252)
T PRK06138 149 GRA-AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPY 190 (252)
T ss_pred Ccc-HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence 112 79999999999998887654 8999999999998875
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=146.88 Aligned_cols=157 Identities=19% Similarity=0.216 Sum_probs=115.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------ce--eeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------WI--FVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------~~--~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
+.++||||||+|++|+++++.|+++|++ .... .. .+..+.+|++|++++.++++.. ++|+
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDV 89 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3468999999999999999999999884 1100 00 2355689999999998888642 6999
Q ss_pred EEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHH----hcCC-CEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 63 VIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSY----KQGV-KKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 63 Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v-~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|||+++..... ....++....++.|+.++.++++++. ..+. +++|++||......
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~---------------- 153 (264)
T PRK12829 90 LVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG---------------- 153 (264)
T ss_pred EEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC----------------
Confidence 99999975211 11223456789999999999999874 3444 57888887643211
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
.+....|+.+|...|.+++.++... +++++++||++++++..
T Consensus 154 ~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~ 198 (264)
T PRK12829 154 YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM 198 (264)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence 1112269999999999998887653 89999999999998853
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.4e-16 Score=144.77 Aligned_cols=153 Identities=17% Similarity=0.079 Sum_probs=112.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
++++|||||+|+||+++++.|+++|++ ... ....+..+.+|+++++++.++++.. ++|+
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV 87 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence 468999999999999999999999973 110 0112445689999999888777642 6899
Q ss_pred EEEcccccCC--c--cccccchhhHHHHHHHHHHHHH----HHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGG--L--FHNMSHNLDFFRVNMKINDNVL----DTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~--~--~~~~~~~~~~~~~nv~~~~~ll----~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+||+|+.... + .....+....+++|+.++..++ ..+++.+..++|++||...++..
T Consensus 88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------------- 151 (260)
T PRK12823 88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN---------------- 151 (260)
T ss_pred EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC----------------
Confidence 9999985321 1 1122334556788888776554 44445666789999998765311
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.. .|+.+|...+.+++.++... |+++++++|+.++++.
T Consensus 152 -~~-~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 152 -RV-PYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred -CC-ccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence 12 69999999999999887765 8999999999999873
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.5e-16 Score=144.53 Aligned_cols=159 Identities=18% Similarity=0.173 Sum_probs=122.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------C---CCCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------D---DETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHL 66 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~ 66 (358)
||+.++|+||||+|+||++++++|.++|++ . ......+.++.+|++|++++.++++.. ++|+|||+
T Consensus 1 m~~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 1 MSNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 787789999999999999999999999973 1 112234566799999999999988752 58999999
Q ss_pred ccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 67 AAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 67 a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+...... ...++....+++|+.++.++++++ ++.+.+++|++||...+.. .|....
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~~~~~ 144 (270)
T PRK06179 81 AGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP----------------APYMAL 144 (270)
T ss_pred CCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC----------------CCCccH
Confidence 99753211 122345678999999999888885 5567789999999755432 122237
Q ss_pred hHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
|+.+|...|.+.+.++.. .|+++++++|+.+.++..
T Consensus 145 Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 145 YAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 999999999988877554 589999999999887753
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.5e-16 Score=145.01 Aligned_cols=158 Identities=20% Similarity=0.101 Sum_probs=117.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc-------CCCC-----------ceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR-------DDET-----------WIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
||.+++||||||+|.||+++++.|+++|++ .... ...+.++.+|++|++++.+++++.
T Consensus 1 ~~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 1 VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 566789999999999999999999999874 0000 113456689999999998888753
Q ss_pred -CCcEEEEcccccCCcccc---ccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 -KPTHVIHLAAMVGGLFHN---MSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|+|||+|+........ .......+++|+.++..+++++.. .+.++||++||...+..
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------- 147 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY------------- 147 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-------------
Confidence 589999999864321111 122234678999999999888875 34569999999754321
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
..+.. .|+.+|...|.+++.++.. .|+++++++|+.+..+.
T Consensus 148 --~~~~~-~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 148 --LENYT-TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred --CCCcc-HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 11222 7999999999999888655 48999999999887654
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.3e-16 Score=142.62 Aligned_cols=154 Identities=21% Similarity=0.165 Sum_probs=116.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC-------CCC-----------ceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD-------DET-----------WIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~-------~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
.++++||||+|+||++++++|+++|++- ... ...+.++.+|+++++++.++++. ..+
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV 85 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999988740 000 01345678999999999888875 258
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+..... ....+.....++.|+.++..+++++.. .+..++|++||...+...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------- 150 (247)
T PRK12935 86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG--------------- 150 (247)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC---------------
Confidence 9999999975421 112245677899999999999999874 345689999997443211
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.+.. .|+.+|...+.+++.++.+. ++++++++|+.+.++
T Consensus 151 ~~~~-~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~ 192 (247)
T PRK12935 151 FGQT-NYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTE 192 (247)
T ss_pred CCCc-chHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcCh
Confidence 1222 79999999988887776653 899999999988765
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.1e-16 Score=142.71 Aligned_cols=154 Identities=15% Similarity=0.118 Sum_probs=116.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
|+||||||+|+||++|++.|+++|++ .... ...+.++.+|+++++++.++++.. ++|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 47999999999999999999999973 1110 123556789999999988877643 689
Q ss_pred EEEEcccccCCc-----cccccchhhHHHHHHHHHHHHHHHHHhc-----C-----CCEEEEeeccceecCCCCCCCccc
Q psy7590 62 HVIHLAAMVGGL-----FHNMSHNLDFFRVNMKINDNVLDTSYKQ-----G-----VKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 62 ~Vih~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~~-----~-----v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
+|||+|+..... ..........+++|+.++.++++++... + ..++|++||...+...
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 154 (256)
T PRK12745 83 CLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS-------- 154 (256)
T ss_pred EEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC--------
Confidence 999999874321 1122445667999999999999988653 1 4679999998653211
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+.. .|+.+|...|.+++.++.. .|+++++++|+.+.++.
T Consensus 155 -------~~~~-~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 197 (256)
T PRK12745 155 -------PNRG-EYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDM 197 (256)
T ss_pred -------CCCc-ccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcc
Confidence 1122 6999999999999988764 58999999999988764
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.2e-16 Score=141.14 Aligned_cols=156 Identities=18% Similarity=0.176 Sum_probs=118.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC------CCC---------------ceeeecccccCCCHHHHHHHHhc-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD------DET---------------WIFVSSKEADLSNLESTQQLFSK----- 57 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~------~~~---------------~~~~~~~~~Dl~~~~~~~~~~~~----- 57 (358)
+|+|+||||+|+||+++++.|+++|++- ..+ ...+.++.+|+.+++++.++++.
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF 85 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999998741 000 01245678999999999888753
Q ss_pred cCCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH-----hcCCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 58 YKPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY-----KQGVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~-----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
.++|+|||+++..... ....++....+++|+.++.++++++. +.+.+++|++||...+...
T Consensus 86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 154 (249)
T PRK12827 86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN----------- 154 (249)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC-----------
Confidence 2689999999975421 11223345688999999999999998 4566789999998654321
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
.+.. .|+.+|...+.+++.++.. .+++++++||+.+.++..
T Consensus 155 ----~~~~-~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 198 (249)
T PRK12827 155 ----RGQV-NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA 198 (249)
T ss_pred ----CCCc-hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence 1122 7999999999888887665 389999999999998754
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-16 Score=141.81 Aligned_cols=155 Identities=18% Similarity=0.222 Sum_probs=116.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC---------CceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE---------TWIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~---------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
.++||||||+|+||+++++.|+++|++ ... ....+..+.+|+.|.+++.++++.. ++|+|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 86 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDAL 86 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEE
Confidence 368999999999999999999999974 111 1123455679999999998887642 68999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+++...... ...+.....+..|+.++.++++++. +.+.+++|++||...++.. +.
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------~~ 150 (239)
T PRK12828 87 VNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG----------------PG 150 (239)
T ss_pred EECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC----------------CC
Confidence 99998643111 1122345668899999999988875 4567899999999776432 11
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...|+.+|...+.+++.+++. .++++.++||+.++++.
T Consensus 151 ~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~ 191 (239)
T PRK12828 151 MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP 191 (239)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 226999999998888777654 48999999999999873
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-16 Score=147.23 Aligned_cols=157 Identities=17% Similarity=0.109 Sum_probs=115.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
|++++|+||||+|.||++++++|+++|++ ...+ ...+..+.+|++|++++.++++.. ++|+|||
T Consensus 1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 35679999999999999999999999974 1111 113456789999999998888642 6999999
Q ss_pred cccccCCc---cccccchhhHHHHHHHH----HHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 66 LAAMVGGL---FHNMSHNLDFFRVNMKI----NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 66 ~a~~~~~~---~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|+..... ....++....+++|+.+ ++.+++.+++.+..++|++||...+.. .|...
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~----------------~~~~~ 144 (273)
T PRK06182 81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY----------------TPLGA 144 (273)
T ss_pred CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC----------------CCCcc
Confidence 99975321 11234456788899988 455666667777779999999753211 11122
Q ss_pred chHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~~ 174 (358)
.|+.+|...+.+.+.++. ..|+++++++|+.+..+.
T Consensus 145 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 145 WYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred HhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence 699999999998776653 458999999999998764
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=139.03 Aligned_cols=156 Identities=17% Similarity=0.151 Sum_probs=117.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
++++||||||+|+||++++++|+++|++ .... ...+.++.+|+++.+++.++++.. ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4579999999999999999999999873 1100 113556799999999998887642 58
Q ss_pred cEEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+++....... ........+++|+.++.++++++. +.+.+++|++||...+....
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~-------------- 147 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS-------------- 147 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC--------------
Confidence 999999986431111 112235679999999999988875 45667999999987764321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
... .|+.+|...+.+++.++.+. ++++++++|+.++++.
T Consensus 148 -~~~-~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 148 -GEA-VYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred -CCc-hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 112 79999999998888887664 8999999999998774
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.4e-15 Score=138.45 Aligned_cols=155 Identities=19% Similarity=0.139 Sum_probs=115.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.++||||||+|++|++++++|+++|++ .... ...+.++.+|+.+++++..+++.. ++|+
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 84 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDI 84 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999999999999999999999974 1110 012446789999999999888653 6899
Q ss_pred EEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|||+++..... ..+.+.....++.|+.++..+++.+.. .+.++||++||...+... .
T Consensus 85 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------~ 149 (251)
T PRK07231 85 LVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR---------------P 149 (251)
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC---------------C
Confidence 99999874311 112234456889999987777776654 567799999998765422 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+.. .|+.+|...+.+++.++.+. ++++++++|+.+..+.
T Consensus 150 ~~~-~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~ 191 (251)
T PRK07231 150 GLG-WYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGL 191 (251)
T ss_pred Cch-HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCc
Confidence 222 79999999999888887653 8999999999886553
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=138.52 Aligned_cols=156 Identities=16% Similarity=0.159 Sum_probs=114.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
||+.++||||||||++|+++++.|++.|++ ... ....+..+.+|+++++++.++++..
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 455679999999999999999999999874 111 0123445678999999998887642
Q ss_pred -CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeecc-ceecCCCCCCCcccccc
Q psy7590 59 -KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLST-CIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~-~vy~~~~~~~~~E~~~~ 129 (358)
++|+|||+++...... ...+.....+..|+.++.++++++... +.++||++||. ++++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~----------- 150 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP----------- 150 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC-----------
Confidence 6899999998754211 112234567889999999999888754 45689999997 343321
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...|.+++.+++. .++.+++++|+.+.++
T Consensus 151 ------~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~ 191 (248)
T PRK05557 151 ------GQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETD 191 (248)
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCc
Confidence 1126999999999888777654 4899999999877544
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.6e-15 Score=137.44 Aligned_cols=158 Identities=18% Similarity=0.098 Sum_probs=119.2
Q ss_pred CCCC--CEEEEEcCCChhHHHHHHHHHHccc-c------CCCCc----eeeecccccCCCHHHHHHHHhcc-CCcEEEEc
Q psy7590 1 MAEE--KIILVTGGTGLVGKAIEKIVKEEEK-R------DDETW----IFVSSKEADLSNLESTQQLFSKY-KPTHVIHL 66 (358)
Q Consensus 1 m~~~--~~VlItGatG~lG~~l~~~L~~~g~-~------~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~ 66 (358)
||++ ++|+||||+|++|+++++.|+++|+ + ..... ..+.++.+|+.+++++.++++.. .+|+|||+
T Consensus 1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhcCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 6653 5899999999999999999999997 3 11111 24556789999999999988764 38999999
Q ss_pred ccccCCc----cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 67 AAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 67 a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
++..... ....++....+++|+.++..+++++. ..+..++|++||...+... .+..
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~---------------~~~~- 144 (238)
T PRK08264 81 AGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF---------------PNLG- 144 (238)
T ss_pred CCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC---------------CCch-
Confidence 9972211 11223455678899999999999875 3456789999998665321 1122
Q ss_pred chHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.|+.+|...|.+.+.++... +++++++||+.+.++.
T Consensus 145 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 145 TYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred HhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 79999999999988876653 8999999999887653
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.1e-16 Score=138.79 Aligned_cols=152 Identities=19% Similarity=0.133 Sum_probs=107.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------CceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------TWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~ 69 (358)
||+||||||+|++|+++++.|+++ ++ ... ....+.++.+|++|++++.+++... ++|+|||+++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 569999999999999999999988 63 111 1113556789999999999998753 59999999997
Q ss_pred cCCccc---cccchhhHHHHHHHH----HHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 70 VGGLFH---NMSHNLDFFRVNMKI----NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 70 ~~~~~~---~~~~~~~~~~~nv~~----~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
...... ........++.|+.+ ++++++++++.+ +++|++||...++.. .+.. .|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~v~~ss~~~~~~~---------------~~~~-~y~~ 144 (227)
T PRK08219 82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH-GHVVFINSGAGLRAN---------------PGWG-SYAA 144 (227)
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEcchHhcCcC---------------CCCc-hHHH
Confidence 542111 112234457888888 555555555554 589999998765422 1122 7999
Q ss_pred HHHHHHHHHHHHHhhc-C-ceEEEEecCcccCC
Q psy7590 143 AKRMLDVLNKAYYQQH-G-VTYTSVIPCNVFGP 173 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~-g-~~~~ilRp~~v~G~ 173 (358)
+|...|.+++.++... + +++..++|+.+.++
T Consensus 145 ~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~ 177 (227)
T PRK08219 145 SKFALRALADALREEEPGNVRVTSVHPGRTDTD 177 (227)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEecCCccch
Confidence 9999998888775542 4 78888888765443
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.1e-16 Score=142.88 Aligned_cols=155 Identities=16% Similarity=0.161 Sum_probs=116.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|+||++++++|+++|++ .... ...+..+.+|++|++++.++++.. ++|
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 89 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPID 89 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 368999999999999999999999974 1000 012445688999999999888752 489
Q ss_pred EEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++....... ..+.....+.+|+.++.++++++.+. +..++|++||...... .
T Consensus 90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~---------------~- 153 (255)
T PRK07523 90 ILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA---------------R- 153 (255)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC---------------C-
Confidence 99999997532111 12233567889999999999988753 5679999999754311 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...|.+++.++. ..|+++.++||+.+.++.
T Consensus 154 ~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 196 (255)
T PRK07523 154 PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL 196 (255)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence 1122799999999999988876 358999999999988874
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-15 Score=139.68 Aligned_cols=167 Identities=22% Similarity=0.176 Sum_probs=115.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc---
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
|++.|+||||||+|.||+++++.|+++|++ .... ...+.++.+|++|++++.++++..
T Consensus 1 ~~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 1 MLKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 777789999999999999999999999974 1111 112334589999999998888752
Q ss_pred --CCcEEEEcccccCCc------cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccc
Q psy7590 59 --KPTHVIHLAAMVGGL------FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 59 --~~d~Vih~a~~~~~~------~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
++|+|||+|+..... ..+.......++.|+.++..+++++ ++.+.+++|++||.+.+.... ....++
T Consensus 81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~ 159 (256)
T PRK09186 81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK-FEIYEG 159 (256)
T ss_pred cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc-chhccc
Confidence 389999999753210 1112234556777887766555544 445677999999976543221 111222
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+ +..... .|+.+|...+.+.+.++.. .++++++++|+.++++
T Consensus 160 ~----~~~~~~-~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~ 204 (256)
T PRK09186 160 T----SMTSPV-EYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDN 204 (256)
T ss_pred c----ccCCcc-hhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCC
Confidence 2 222223 6999999999998877664 4799999999988754
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.5e-16 Score=144.52 Aligned_cols=155 Identities=17% Similarity=0.184 Sum_probs=119.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--C-----------ceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--T-----------WIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
+|+||||||+|.||+++++.|+++|++ ... . ...+..+.+|+++++++.++++.. +
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 134 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGG 134 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999873 100 0 112345689999999998887642 6
Q ss_pred CcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 60 PTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 60 ~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|+|||+|+..... ..+.++....+++|+.++..+++++... .-.++|++||...|...
T Consensus 135 iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~--------------- 199 (300)
T PRK06128 135 LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS--------------- 199 (300)
T ss_pred CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC---------------
Confidence 99999999964211 1123456779999999999999999764 12489999998776432
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+++.++.+ .|+++.+++|+.+.++.
T Consensus 200 -~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 200 -PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 11126999999999999888775 48999999999998875
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.6e-15 Score=137.08 Aligned_cols=154 Identities=18% Similarity=0.102 Sum_probs=117.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC--CCceeeecccccCCCHHHHHHHHhc-----cCCcEEEEcccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD--ETWIFVSSKEADLSNLESTQQLFSK-----YKPTHVIHLAAMVG 71 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~--~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vih~a~~~~ 71 (358)
|++|||||+|++|++++++|+++|++ .. .....+..+.+|+++++++.++++. .++|+|||+++...
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 88 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILR 88 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 58999999999999999999999974 11 0112345568999999999988864 24899999999754
Q ss_pred Ccc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHH
Q psy7590 72 GLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 72 ~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
... ...++....+++|+.++..+++++.. .+..++|++||..... +..+.. .|+.+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~---------------~~~~~~-~Y~~sK 152 (252)
T PRK08220 89 MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHV---------------PRIGMA-AYGASK 152 (252)
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhcc---------------CCCCCc-hhHHHH
Confidence 211 12345567899999999999999853 3456899999975431 111223 799999
Q ss_pred HHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 145 RMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 145 ~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...|.+++.++.. .|+++++++|+.++++.
T Consensus 153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 185 (252)
T PRK08220 153 AALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM 185 (252)
T ss_pred HHHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence 9999999888765 58999999999998875
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.1e-16 Score=140.82 Aligned_cols=153 Identities=20% Similarity=0.153 Sum_probs=112.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
++||||||+|+||+++++.|.++|++ .... ...+..+.+|+++.+++.++++. .++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 82 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV 82 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999974 1100 02355678999999998887764 268
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCC-CEEEEeeccc-eecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGV-KKVVSCLSTC-IFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v-~r~V~~SS~~-vy~~~~~~~~~E~~~~~~ 131 (358)
|+|||+|+...... ...++....++.|+.++..+++++.. .+. .++|++||.. .++..
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~------------- 149 (259)
T PRK12384 83 DLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK------------- 149 (259)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-------------
Confidence 99999998654211 11233456789999998877777754 443 4899999864 33211
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~~ 174 (358)
....|+.+|...+.+++.++. ..|+++.++||+.++++.
T Consensus 150 ----~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~ 191 (259)
T PRK12384 150 ----HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSP 191 (259)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccch
Confidence 122799999999888888765 368999999999988764
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=138.92 Aligned_cols=155 Identities=14% Similarity=0.138 Sum_probs=117.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.|+||||||+|+||++|+++|+++|++ .... ...+..+.+|+++++++..+++.. ++|
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d 84 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVD 84 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCcc
Confidence 468999999999999999999999983 1100 112455689999999998877642 689
Q ss_pred EEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+|+..... ....+.....++.|+.++..+++++... ...++|++||...+.. ..
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~---------------~~ 149 (258)
T PRK07890 85 ALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS---------------QP 149 (258)
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC---------------CC
Confidence 999999864321 1223455678999999999999999753 2358999999855321 11
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+.. .|+.+|...+.+++.++.. .++++++++|+.++++.
T Consensus 150 ~~~-~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~ 191 (258)
T PRK07890 150 KYG-AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP 191 (258)
T ss_pred Ccc-hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence 222 7999999999999988764 38999999999999885
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.4e-15 Score=137.98 Aligned_cols=155 Identities=18% Similarity=0.085 Sum_probs=110.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
++++|||||+|.||+++++.|.++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 85 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVD 85 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 457999999999999999999999974 000 0112445689999999998887653 589
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcC-CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+...... ...+.....+++|+.++.++++++. +.+ ..++|++||...+...
T Consensus 86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~--------------- 150 (275)
T PRK05876 86 VVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN--------------- 150 (275)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC---------------
Confidence 9999999743111 1122345678999999999998875 333 4589999998665321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~~ 174 (358)
|....|+.+|...+.+.+.++. ..|+.+++++|+.+.++.
T Consensus 151 -~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 193 (275)
T PRK05876 151 -AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNL 193 (275)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccc
Confidence 1222799999974444444332 248999999999887663
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.8e-16 Score=139.80 Aligned_cols=155 Identities=17% Similarity=0.156 Sum_probs=114.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
.++|+||||+|.||++|++.|+++|++ ... ....+..+.+|+++++++.++++. .++|
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 86 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLD 86 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999874 111 011355678999999999888864 2699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++...... ...+.....++.|+.++.++++++... +..++|++||...+...
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 150 (250)
T PRK12939 87 GLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA---------------- 150 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC----------------
Confidence 9999999753211 122334566889999999999988653 23489999997554221
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...|.+++.++.. .++.++.++|+.+..+.
T Consensus 151 ~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (250)
T PRK12939 151 PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEA 193 (250)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcc
Confidence 11126999999999999887654 47999999999876554
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.2e-15 Score=135.87 Aligned_cols=158 Identities=17% Similarity=0.149 Sum_probs=115.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
.++||||||+|+||+++++.|+++|++ ...+ ...+.++.+|++|++++.+++.. .++|
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id 91 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVD 91 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 478999999999999999999999874 1000 11344578999999999776653 2589
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc-----CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ-----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~-----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+...... ...+.....++.|+.++.++++++... +..+||++||...+..... ..
T Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-----------~~ 160 (259)
T PRK08213 92 ILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-----------EV 160 (259)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-----------cc
Confidence 9999998642111 112234567889999999999988654 5679999999865432210 01
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.+.. .|+.+|+..|.+++.+++.+ |+.+.+++|+.+-.+
T Consensus 161 ~~~~-~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~ 202 (259)
T PRK08213 161 MDTI-AYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTK 202 (259)
T ss_pred cCcc-hHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCc
Confidence 1223 79999999999999987753 799999999877554
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.5e-16 Score=139.59 Aligned_cols=155 Identities=17% Similarity=0.168 Sum_probs=116.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC------ceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET------WIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMVG 71 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~~ 71 (358)
++++||||+|++|+++++.|+++|++ .... ......+.+|+++++++.++++.. ++|+|||+++...
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~~~ 89 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGIAS 89 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 68999999999999999999999974 1110 012345679999999998888753 4899999999743
Q ss_pred Cc---cccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 72 GL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 72 ~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
.. .....+....+..|+.++.++++++.+. + ..+||++||...+... .+.. .|+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------~~~~-~y~~s 153 (245)
T PRK07060 90 LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL---------------PDHL-AYCAS 153 (245)
T ss_pred CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC---------------CCCc-HhHHH
Confidence 21 1122344567789999999999988763 2 3589999998654321 1122 79999
Q ss_pred HHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 144 KRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 144 K~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
|...|.+++.++.. .+++++.+||+.++++..
T Consensus 154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 188 (245)
T PRK07060 154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA 188 (245)
T ss_pred HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence 99999999988765 379999999999988753
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.3e-15 Score=135.31 Aligned_cols=154 Identities=14% Similarity=0.116 Sum_probs=113.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+|++|||||+|+||+++++.|+++|++ .... ...+..+.+|++|.+++.++++.. ++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i 88 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPI 88 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999873 1100 113455689999999998887642 58
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcC----CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQG----VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~----v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+..... ....+.....+++|+.++..+++++.... -.++|++||...+. +
T Consensus 89 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~----------------~ 152 (258)
T PRK09134 89 TLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN----------------L 152 (258)
T ss_pred CEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC----------------C
Confidence 9999999964321 11223456789999999999999887642 34788887764432 2
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...|.+.+.+++.. ++.++.++|+.+...
T Consensus 153 ~p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~ 194 (258)
T PRK09134 153 NPDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPS 194 (258)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCC
Confidence 2222379999999999999987754 489999999887654
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.2e-15 Score=137.49 Aligned_cols=154 Identities=18% Similarity=0.168 Sum_probs=115.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.|++|||||+|.||++++++|+++|++ ... ....+..+.+|++|++++.++++.. ++|+
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~ 97 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI 97 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999999999999999999999974 100 0123556789999999998887642 6999
Q ss_pred EEEcccccCCc-----cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccce-ecCCCCCCCccccccCCC
Q psy7590 63 VIHLAAMVGGL-----FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCI-FPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 63 Vih~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~v-y~~~~~~~~~E~~~~~~~ 132 (358)
|||+|+..... ....++....+++|+.++.++++++... +..++|++||... ++..
T Consensus 98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-------------- 163 (280)
T PLN02253 98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL-------------- 163 (280)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC--------------
Confidence 99999975321 1122445678999999999999888643 3347888888743 3211
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
... .|+.+|...|.+.+.++.+. |+.+.+++|+.+..+.
T Consensus 164 --~~~-~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 205 (280)
T PLN02253 164 --GPH-AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTAL 205 (280)
T ss_pred --CCc-ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 112 69999999999999887764 7999999999887653
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.1e-15 Score=143.07 Aligned_cols=155 Identities=15% Similarity=0.198 Sum_probs=117.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+|+||||||+|+||++++++|+++|++ .... ...+.++.+|+++.+++.++++.. ++
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~i 125 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRL 125 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999984 1100 112445689999999998887642 68
Q ss_pred cEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 61 THVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 61 d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|+|||+|+..... ....+.....++.|+.++.++++++... .-.++|++||...|....
T Consensus 126 D~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~--------------- 190 (290)
T PRK06701 126 DILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE--------------- 190 (290)
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC---------------
Confidence 9999999964311 0112334568999999999999999763 224899999987764321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
....|+.+|...+.+++.++... |++++.++|+.++.+.
T Consensus 191 -~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~ 232 (290)
T PRK06701 191 -TLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL 232 (290)
T ss_pred -CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence 11269999999999999888764 8999999999888764
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=6e-15 Score=134.33 Aligned_cols=154 Identities=14% Similarity=0.170 Sum_probs=114.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-C-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-T-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++|||||+|+||++++++|+++|+. ... . ...+.++.+|++|.+++.++++.. ++|
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLD 82 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 47999999999999999999999863 000 0 012345689999999998888642 589
Q ss_pred EEEEcccccCCcc----ccccchhhHHHHHHHHHHHHHHHHHhcC-------CCEEEEeeccc-eecCCCCCCCcccccc
Q psy7590 62 HVIHLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLDTSYKQG-------VKKVVSCLSTC-IFPDKTTYPIDETMVH 129 (358)
Q Consensus 62 ~Vih~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~aa~~~~-------v~r~V~~SS~~-vy~~~~~~~~~E~~~~ 129 (358)
+|||+|+...... ...++....+++|+.++.++++++...- -.++|++||.. +++..
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------- 151 (248)
T PRK06123 83 ALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP----------- 151 (248)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-----------
Confidence 9999999753211 1222345789999999999988886531 12699999974 44321
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
. ... .|+.+|...|.+++.++.+. |++++++||+.++++.
T Consensus 152 ---~-~~~-~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 152 ---G-EYI-DYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred ---C-Ccc-chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence 0 011 59999999999998887764 8999999999999985
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-15 Score=136.84 Aligned_cols=154 Identities=17% Similarity=0.148 Sum_probs=114.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++||||||+|++|+++++.|+++|++ .... ...+.++.+|++|++++.++++.. ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 358999999999999999999999873 1100 113455689999999998888753 689
Q ss_pred EEEEcccccCCccc----cccchhhHHHHHHHHHHHHHHHHHh---cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLFH----NMSHNLDFFRVNMKINDNVLDTSYK---QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~~----~~~~~~~~~~~nv~~~~~ll~aa~~---~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++....... ..+.....++.|+.++.++++++.. .+..++|++||...+... .
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------~ 145 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV---------------P 145 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC---------------C
Confidence 99999986432111 1122355799999999999999853 234689999998765321 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+.. .|+.+|...|.+.+.++.. .++++++++|+.+..+
T Consensus 146 ~~~-~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~ 186 (263)
T PRK06181 146 TRS-GYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATD 186 (263)
T ss_pred Ccc-HHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccC
Confidence 122 7999999999998777543 4899999999988765
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-15 Score=141.58 Aligned_cols=157 Identities=17% Similarity=0.152 Sum_probs=116.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhcc------CCcEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKY------KPTHV 63 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~V 63 (358)
|..+++|+||||+|.||+++++.|.++|++ .... ...+..+.+|++|++++.++++.. ++|+|
T Consensus 1 m~~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 1 MDMKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence 555568999999999999999999999974 1111 113456689999999888877642 58999
Q ss_pred EEcccccCCccc---cccchhhHHHHHHHH----HHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLFH---NMSHNLDFFRVNMKI----NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~~---~~~~~~~~~~~nv~~----~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+|+....... ..+.....+++|+.+ ++.+++++++.+..++|++||...+.. ..+.
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---------------~~~~ 145 (277)
T PRK05993 81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP---------------MKYR 145 (277)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC---------------CCcc
Confidence 999986432111 112335678999998 777888888888889999999754321 1122
Q ss_pred CcchHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~ 173 (358)
. .|+.+|...|.+.+.++. ..|+++++++|+.+-.+
T Consensus 146 ~-~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 146 G-AYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred c-hHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 2 799999999999887753 35899999999977544
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-14 Score=133.37 Aligned_cols=214 Identities=18% Similarity=0.148 Sum_probs=154.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|+||||||||++|++++++|+++|++ .... ..++.+.+|+.++.++..++. +.+.++++.+...
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~--G~~~~~~i~~~~~-- 75 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAK--GVDGVLLISGLLD-- 75 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhc--cccEEEEEecccc--
Confidence 47999999999999999999999984 1112 567788999999999999999 6899999877541
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
... ...........+..+++. .++++++++|...+- ..... .|..+|..+|..+..
T Consensus 76 ----~~~-~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~-----------------~~~~~-~~~~~~~~~e~~l~~ 131 (275)
T COG0702 76 ----GSD-AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGAD-----------------AASPS-ALARAKAAVEAALRS 131 (275)
T ss_pred ----ccc-chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCC-----------------CCCcc-HHHHHHHHHHHHHHh
Confidence 111 233333444444444444 447789988877542 11223 699999999999966
Q ss_pred HHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcc
Q psy7590 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPF 233 (358)
Q Consensus 154 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (358)
+|++++++|+..+|...... ++... ...
T Consensus 132 ----sg~~~t~lr~~~~~~~~~~~----------~~~~~---~~~----------------------------------- 159 (275)
T COG0702 132 ----SGIPYTTLRRAAFYLGAGAA----------FIEAA---EAA----------------------------------- 159 (275)
T ss_pred ----cCCCeEEEecCeeeeccchh----------HHHHH---Hhh-----------------------------------
Confidence 79999999977776554331 11111 111
Q ss_pred ccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCccee
Q psy7590 234 CFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 234 ~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
+.++.....+ ..+++..+|++.++...+..+... .++|.+.+++..+..++++.+....|++..+.
T Consensus 160 ----~~~~~~~~~~--~~~~i~~~d~a~~~~~~l~~~~~~-~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~~ 225 (275)
T COG0702 160 ----GLPVIPRGIG--RLSPIAVDDVAEALAAALDAPATA-GRTYELAGPEALTLAELASGLDYTIGRPVGLI 225 (275)
T ss_pred ----CCceecCCCC--ceeeeEHHHHHHHHHHHhcCCccc-CcEEEccCCceecHHHHHHHHHHHhCCcceee
Confidence 3333333333 677899999999999999887643 35899999999999999999999999987763
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.3e-15 Score=133.74 Aligned_cols=157 Identities=20% Similarity=0.118 Sum_probs=114.6
Q ss_pred CCCC--CEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhc-----cC
Q psy7590 1 MAEE--KIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSK-----YK 59 (358)
Q Consensus 1 m~~~--~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~-----~~ 59 (358)
|+.+ ++|+||||+|+||++++++|+++|++ .... ...+..+.+|+++.+++..+++. .+
T Consensus 1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (249)
T PRK06500 1 MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGR 80 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 5543 58999999999999999999999974 1100 01234568899999887766553 25
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeecc-ceecCCCCCCCccccccCCCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLST-CIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~-~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|+|||+|+..... ....+.....+++|+.++.++++++... ...++|++||. +.|+..
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~--------------- 145 (249)
T PRK06500 81 LDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP--------------- 145 (249)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC---------------
Confidence 89999999864321 1223455678999999999999999752 22467777775 444321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
... .|+.+|...|.+++.++.+. |+++++++|+.++++.
T Consensus 146 -~~~-~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 146 -NSS-VYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred -Ccc-HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 112 79999999999998776543 8999999999998873
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-14 Score=129.76 Aligned_cols=155 Identities=17% Similarity=0.179 Sum_probs=114.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhc----cCCcEEEEcccccCC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSK----YKPTHVIHLAAMVGG 72 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~d~Vih~a~~~~~ 72 (358)
+.|+||||||+|.||++++++|+++|++ .........++.+|+++++++.++++. .++|+|||+++....
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 81 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALP 81 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCC
Confidence 3478999999999999999999999973 211111224568999999988777763 368999999997542
Q ss_pred ccc---cccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 73 LFH---NMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 73 ~~~---~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
... ..++....++.|+.++.++.+++. +.+..++|++||...|+.. ....|+.+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------------~~~~Y~~sK~ 144 (234)
T PRK07577 82 QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL-----------------DRTSYSAAKS 144 (234)
T ss_pred CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-----------------CchHHHHHHH
Confidence 111 223445678889998877766654 4567799999998766432 1127999999
Q ss_pred HHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 146 MLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 146 ~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
..|.+++.++.. .|+.+++++|+.+..+.
T Consensus 145 a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 145 ALVGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred HHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 999888877654 48999999999887664
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-14 Score=132.37 Aligned_cols=155 Identities=17% Similarity=0.085 Sum_probs=115.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
+++|+||||+|+||+++++.|+++|++ .... ...+.++.+|+++++++.++++.. ++|+||
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li 89 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDALV 89 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 468999999999999999999999873 1100 012445689999999887766542 589999
Q ss_pred EcccccCCcc-----ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 65 HLAAMVGGLF-----HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
|+|+...... .+.++....++.|+.++.++++++... ...++|++||...+... +.
T Consensus 90 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~----------------~~ 153 (255)
T PRK05717 90 CNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE----------------PD 153 (255)
T ss_pred ECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC----------------CC
Confidence 9999753210 122345678999999999999999642 23579999988553211 11
Q ss_pred CcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~ 174 (358)
...|+.+|...|.+++.++... ++.+.+++|+.+.++.
T Consensus 154 ~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 154 TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence 1279999999999999888775 4899999999998864
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-14 Score=133.04 Aligned_cols=157 Identities=18% Similarity=0.135 Sum_probs=116.6
Q ss_pred CCCC--CEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcc
Q psy7590 1 MAEE--KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLA 67 (358)
Q Consensus 1 m~~~--~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a 67 (358)
|+++ ++||||||+|.||+++++.|+++|++ .......+..+.+|+++++++.++++.. ++|+|||+|
T Consensus 1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A 80 (258)
T PRK06398 1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA 80 (258)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5443 68999999999999999999999974 2222224556789999999988887642 599999999
Q ss_pred cccCCccc---cccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 68 AMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 68 ~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
+....... ..++....+++|+.++..+++++.. .+..++|++||...+.. ..+.. .|
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------~~~~~-~Y 144 (258)
T PRK06398 81 GIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV---------------TRNAA-AY 144 (258)
T ss_pred CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC---------------CCCCc-hh
Confidence 97432111 1223455689999999998888754 34568999999865431 11222 79
Q ss_pred HHHHHHHHHHHHHHHhhc--CceEEEEecCcccCC
Q psy7590 141 SHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~ 173 (358)
+.+|...+.+.+.++.+. ++.+..++|+.+-.+
T Consensus 145 ~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 145 VTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred hhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence 999999999999887764 388999999877544
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.2e-15 Score=140.01 Aligned_cols=170 Identities=15% Similarity=0.104 Sum_probs=118.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
+++|+||||+|+||.++++.|+++|++ ... ....+.++.+|+++.+++.++++. .++|
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD 85 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLD 85 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCcc
Confidence 568999999999999999999999973 100 011345668999999999888764 2599
Q ss_pred EEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHh----cC--CCEEEEeeccceecCCC----CCC--Ccc
Q psy7590 62 HVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYK----QG--VKKVVSCLSTCIFPDKT----TYP--IDE 125 (358)
Q Consensus 62 ~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~--v~r~V~~SS~~vy~~~~----~~~--~~E 125 (358)
+|||+|+..... ..+.+.....+.+|+.++..+++++.. .+ ..|+|++||...+.... ..+ .+.
T Consensus 86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~ 165 (322)
T PRK07453 86 ALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADL 165 (322)
T ss_pred EEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccch
Confidence 999999975321 123345567899999999999888765 22 35999999986543210 001 010
Q ss_pred ccc--------------cCCCCCCCCcchHHHHHHHHHHHHHHHhhc----CceEEEEecCcccCCC
Q psy7590 126 TMV--------------HNGPPHPSNFGYSHAKRMLDVLNKAYYQQH----GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 126 ~~~--------------~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~ 174 (358)
++. ...+..|.. .|+.||+..+.+.+.+++++ |+.+++++||+|++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 166 GDLSGFEAGFKAPISMADGKKFKPGK-AYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred hhhhcchhcccccccccCccCCCccc-hhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 000 001223444 79999999988888877764 7999999999998754
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.5e-15 Score=136.54 Aligned_cols=154 Identities=17% Similarity=0.146 Sum_probs=114.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--------CceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------TWIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.++||||||+|.||+++++.|+++|++ ... ....+..+.+|+++++++.++++.. ++|+||
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi 94 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILV 94 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 468999999999999999999999974 110 0112335689999999998887642 689999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccce-ecCCCCCCCccccccCCCCCCC
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCI-FPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~v-y~~~~~~~~~E~~~~~~~~~p~ 136 (358)
|+++...... ....+....++.|+.++.++++++.. .+..++|++||... ++.. .
T Consensus 95 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------------~ 157 (255)
T PRK06841 95 NSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE-----------------R 157 (255)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC-----------------C
Confidence 9999753211 11233456889999999999999865 35669999999843 3211 1
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...|+.+|...+.+.+.++.. .|+.+..++|+.+..+.
T Consensus 158 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 198 (255)
T PRK06841 158 HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTEL 198 (255)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcc
Confidence 127999999999888888775 38999999999887653
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=130.53 Aligned_cols=154 Identities=22% Similarity=0.217 Sum_probs=114.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
++||||||+|+||+++++.|.++|++ ... ....+.++.+|+++++++.++++.. ++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 48999999999999999999999873 110 0113556789999999988887642 599
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHH----HHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLD----TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++..... ....+.....++.|+.++.++.. ++++.+..++|++||...+... +.
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-------------~~- 148 (245)
T PRK12824 83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ-------------FG- 148 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC-------------CC-
Confidence 999999864311 12234456788899999888754 4455667799999998665321 11
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...|+.+|...+.+++.++.. .|+.+++++|+.+.++.
T Consensus 149 --~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 149 --QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM 189 (245)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence 127999999998888877653 48999999999988764
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.7e-15 Score=134.03 Aligned_cols=156 Identities=17% Similarity=0.147 Sum_probs=113.2
Q ss_pred CCCC--CEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhc-----cC
Q psy7590 1 MAEE--KIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSK-----YK 59 (358)
Q Consensus 1 m~~~--~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~-----~~ 59 (358)
|+++ +++|||||+|+||+++++.|+++|++ ...+ ...+..+.+|+++.+++.++++. .+
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T PRK12936 1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEG 80 (245)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6653 68999999999999999999999873 1100 01245568999999999887653 25
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccc-eecCCCCCCCccccccCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTC-IFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~ 131 (358)
+|+|||+|+..... .....+....+++|+.++.++++++.. .+..++|++||.. .++..
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 147 (245)
T PRK12936 81 VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP------------- 147 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC-------------
Confidence 89999999974311 112234567889999999988887753 3556899999974 43321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...+.+.+.++.+ .++++++++|+.+..+
T Consensus 148 ----~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~ 188 (245)
T PRK12936 148 ----GQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESA 188 (245)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCc
Confidence 1126999999888777776554 4799999999977543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=130.76 Aligned_cols=157 Identities=17% Similarity=0.078 Sum_probs=114.4
Q ss_pred CCCC--CEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEE--KIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~--~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
||.| ++|+||||+|++|++++++|+++|++ .... ...+..+.+|+.+++++.+++++.
T Consensus 1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (237)
T PRK07326 1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAF 80 (237)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 6654 58999999999999999999999873 1100 023456789999999998888742
Q ss_pred -CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 59 -KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
++|+|||+++..... ....++....+++|+.++..+++++... +..++|++||...+..
T Consensus 81 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-------------- 146 (237)
T PRK07326 81 GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-------------- 146 (237)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC--------------
Confidence 699999999864321 0122334567899999999998888643 4568999999754321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..+.. .|+.+|+..+.+.+.++.. .|++++++||+.+..+
T Consensus 147 -~~~~~-~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~ 189 (237)
T PRK07326 147 -FAGGA-AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATH 189 (237)
T ss_pred -CCCCc-hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCc
Confidence 11122 6999999888888776533 4899999999988655
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-14 Score=130.88 Aligned_cols=157 Identities=17% Similarity=0.127 Sum_probs=112.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC-------CCC-----------ceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD-------DET-----------WIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~-------~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
|++|+||||+|+||++++++|+++|++- ... ...+..+.+|++|++++.++++. .++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 4589999999999999999999998631 000 01244568999999999888874 257
Q ss_pred cEEEEcccccCCcc----ccccchhhHHHHHHHHHHHHHHHHHhcC-------CCEEEEeeccceecCCCCCCCcccccc
Q psy7590 61 THVIHLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLDTSYKQG-------VKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 61 d~Vih~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~aa~~~~-------v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
|+|||+++...... ...++....+++|+.++..+++++...- ..+||++||...+...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~----------- 149 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA----------- 149 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC-----------
Confidence 99999999643110 1112334688999999988877765431 2469999998543211
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
+ .... .|+.+|...|.+++.++.+ .+++++++||+.++++..
T Consensus 150 --~-~~~~-~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~ 194 (247)
T PRK09730 150 --P-GEYV-DYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMH 194 (247)
T ss_pred --C-Cccc-chHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccc
Confidence 1 1112 5999999999888876554 489999999999999853
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.2e-14 Score=133.40 Aligned_cols=155 Identities=19% Similarity=0.224 Sum_probs=116.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.++||||||+|.||++++++|+++|++ +... ...+.++.+|+++++++.++++.. ++|+
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 86 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDG 86 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 468999999999999999999999974 1111 112456789999999998888642 6899
Q ss_pred EEEcccccCCc--cccccchhhHHHHHHHHHHHHHHHHHh---cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 63 VIHLAAMVGGL--FHNMSHNLDFFRVNMKINDNVLDTSYK---QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 63 Vih~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|||+|+..... ....++....++.|+.++.++.+++.. .+..++|++||...+... .+..
T Consensus 87 vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------~~~~ 151 (258)
T PRK08628 87 LVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ---------------GGTS 151 (258)
T ss_pred EEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC---------------CCCc
Confidence 99999964321 111134456788999999999888764 234589999998554211 1122
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.|+.+|...|.+++.++.. .+++++.++|+.++++.
T Consensus 152 -~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 152 -GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred -hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 7999999999999988754 48999999999998874
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=132.29 Aligned_cols=154 Identities=21% Similarity=0.190 Sum_probs=113.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC----CCC-----------ceeeecccccCCCHHHHHHHHhcc------CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD----DET-----------WIFVSSKEADLSNLESTQQLFSKY------KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~----~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~ 62 (358)
.++||||||+|+||+++++.|+++|++- ... ...+..+.+|+++++++.++++.. ++|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 3689999999999999999999999740 100 013445689999999998888652 2899
Q ss_pred EEEcccccCC---------ccccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 63 VIHLAAMVGG---------LFHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 63 Vih~a~~~~~---------~~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
+||+|+.... ...+.++....++.|+.++..+++++.. .+..++|++||.....
T Consensus 85 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~------------- 151 (253)
T PRK08642 85 VVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN------------- 151 (253)
T ss_pred EEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-------------
Confidence 9999975310 0112233456799999999999999863 4456899999863321
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+..+.. .|+.+|...|.+++.++++. |+.+..++|+.+..+
T Consensus 152 --~~~~~~-~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~ 195 (253)
T PRK08642 152 --PVVPYH-DYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT 195 (253)
T ss_pred --CCCCcc-chHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence 222333 79999999999999987763 789999999887554
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.5e-14 Score=131.31 Aligned_cols=155 Identities=20% Similarity=0.148 Sum_probs=113.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC--CCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD--ETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMVG 71 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~~ 71 (358)
++||||||+|.||+++++.|.++|++ .. .....+.++.+|++|++++.++++.. ++|+|||+|+...
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~ 89 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSS 89 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccc
Confidence 68999999999999999999999974 11 11123456689999999888766432 5899999998542
Q ss_pred Cc-----cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 72 GL-----FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 72 ~~-----~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
.. ....++....+++|+.++..+.+++ ++.+..++|++||...+... +.+.. .|+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--------------~~~~~-~Y~~ 154 (260)
T PRK06523 90 APAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL--------------PESTT-AYAA 154 (260)
T ss_pred cCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC--------------CCCcc-hhHH
Confidence 11 0122345667889999997776655 44555689999998654210 11222 7999
Q ss_pred HHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 143 AKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 143 sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+|...+.+++.++.. .|+.+.+++|+.+..+.
T Consensus 155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 999999998888765 37999999999998764
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.5e-14 Score=130.77 Aligned_cols=158 Identities=21% Similarity=0.218 Sum_probs=114.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccC----CCC--------------ceeeecccccCCCHHHHHHHHhc-----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRD----DET--------------WIFVSSKEADLSNLESTQQLFSK----- 57 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~----~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~----- 57 (358)
|++.|+++||||+|+||+++++.|.+.|++- ..+ ...+..+.+|+++.+++..+++.
T Consensus 1 ~~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 1 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 80 (252)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHh
Confidence 6777899999999999999999999999730 000 01122346899998877655532
Q ss_pred ------cCCcEEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccc
Q psy7590 58 ------YKPTHVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 58 ------~~~d~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
.++|++||+|+....... ..+.....+++|+.++..+++++...- ..++|++||...+...
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------- 152 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-------- 152 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC--------
Confidence 159999999996432111 112235678899999999998887642 2489999998654321
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+++.++.+. |+++.++.|+.|.++.
T Consensus 153 --------~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 153 --------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 111279999999999998876653 8999999999987764
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.3e-14 Score=130.18 Aligned_cols=154 Identities=16% Similarity=0.155 Sum_probs=114.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC------CC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD------DE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~------~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|.||+++++.|.++|++. .. ....+.++.+|+++++++.++++.. ++
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRI 84 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999741 00 0112456689999999998888752 69
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|+|||+|+..... ....+.....+++|+.++.++++++.+.- ..++|++||...+.. .|
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----------------~~ 148 (245)
T PRK12937 85 DVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP----------------LP 148 (245)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC----------------CC
Confidence 9999999964311 11223455678999999999998887642 248999998755321 12
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...+.+++.++.+ .++.+++++|+.+-.+
T Consensus 149 ~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~ 189 (245)
T PRK12937 149 GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATE 189 (245)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCc
Confidence 2227999999999999887654 3799999999877654
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-14 Score=131.50 Aligned_cols=155 Identities=17% Similarity=0.136 Sum_probs=112.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------ceeeecccccCCCHHHHHHHHhcc-----CCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~ 66 (358)
.|+++||||+|.||+++++.|.++|++ .... ...+..+.+|++|++++.++++.. ++|+|||+
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ 86 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNN 86 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 378999999999999999999999974 1100 002456689999999998887642 68999999
Q ss_pred ccccCCc---cccccchhhHHHHHHHHHH----HHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 67 AAMVGGL---FHNMSHNLDFFRVNMKIND----NVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 67 a~~~~~~---~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+..... ..+.++....+++|+.++. .+++..++.+..++|++||...++.. . +....
T Consensus 87 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~--------------~-~~~~~ 151 (255)
T PRK06463 87 AGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA--------------A-EGTTF 151 (255)
T ss_pred CCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC--------------C-CCccH
Confidence 9874311 1123345678899999954 44555554555689999998765321 1 11226
Q ss_pred hHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
|+.+|...+.+++.++.+ .|+++..++|+.+-.+
T Consensus 152 Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~ 188 (255)
T PRK06463 152 YAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETD 188 (255)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCc
Confidence 999999999999888765 4899999999877443
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-14 Score=132.38 Aligned_cols=154 Identities=17% Similarity=0.133 Sum_probs=112.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
|+|+||||+|++|.++++.|+++|++ .... ...+..+.+|+++.+++.++++.. ++|+|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 48999999999999999999999974 1110 113455689999999998877642 6999999
Q ss_pred cccccCC----ccccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 66 LAAMVGG----LFHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 66 ~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
+|+.... ...+.++....++.|+.++..+++++ .+.+..++|++||...+. +..+..
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------~~~~~~ 145 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW---------------PYAGGN 145 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC---------------CCCCCc
Confidence 9986421 01123345678899999965555554 556677999999975431 111223
Q ss_pred cchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.|+.+|...|.+.+.++... ++.+.+++|+.+.|+.
T Consensus 146 -~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 146 -VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred -hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 79999999999998887653 7999999999887664
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=133.12 Aligned_cols=152 Identities=16% Similarity=0.138 Sum_probs=108.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-----eeeecccccCCCHHHHHHHHhc------cCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-----IFVSSKEADLSNLESTQQLFSK------YKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~------~~~d~Vih~a 67 (358)
++|+||||+|+||.++++.|+++|++ ...+. ..+..+.+|+.+.+++.++++. .++|.+||++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 48999999999999999999999874 11111 1245568999999887776643 2579999999
Q ss_pred cccCCcc---ccccchhhHHHHHHHHHHHH----HHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 68 AMVGGLF---HNMSHNLDFFRVNMKINDNV----LDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 68 ~~~~~~~---~~~~~~~~~~~~nv~~~~~l----l~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
+...... ...+.....++.|+.++.++ ++++.+.+.+++|++||...+.. . +....|
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---------------~-~~~~~Y 146 (256)
T PRK08017 83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS---------------T-PGRGAY 146 (256)
T ss_pred CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC---------------C-CCccHH
Confidence 8643110 12234457889999888775 67777777789999999743321 1 112279
Q ss_pred HHHHHHHHHHHHHHH---hhcCceEEEEecCcccC
Q psy7590 141 SHAKRMLDVLNKAYY---QQHGVTYTSVIPCNVFG 172 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~---~~~g~~~~ilRp~~v~G 172 (358)
+.+|...|.+.+.++ ...++++++++|+.+..
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t 181 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRT 181 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCccc
Confidence 999999998876543 34589999999976643
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.6e-14 Score=127.39 Aligned_cols=153 Identities=18% Similarity=0.142 Sum_probs=114.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
++|+||||+|.||.+++++|+++|+. .... ...+.++.+|+++++++.++++.. ++|+
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDI 87 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccE
Confidence 58999999999999999999999883 1100 113456689999999998888742 6999
Q ss_pred EEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 63 VIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 63 Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|||+++..... ....++....+++|+.++.++++++.. .+.+++|++||...+... .+
T Consensus 88 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------~~ 152 (239)
T PRK07666 88 LINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA---------------AV 152 (239)
T ss_pred EEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC---------------CC
Confidence 99999874321 012233456789999999999888864 456789999998544221 12
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.. .|+.+|...+.+++.++.+ .|++++++||+.+..+
T Consensus 153 ~~-~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~ 192 (239)
T PRK07666 153 TS-AYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATD 192 (239)
T ss_pred Cc-chHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCc
Confidence 22 6999999999888777644 4899999999988765
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.9e-14 Score=148.39 Aligned_cols=155 Identities=23% Similarity=0.172 Sum_probs=115.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------c---eeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------W---IFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------~---~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.++||||||+|+||+++++.|+++|++ .... . ..+..+.+|+++++++.++++.. ++|+
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv 501 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDI 501 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 368999999999999999999999873 1100 0 13446689999999998887642 6999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCC-CEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGV-KKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v-~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|||+|+...... .........+++|+.++..+++++. +.+. .+||++||...+...
T Consensus 502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~---------------- 565 (681)
T PRK08324 502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG---------------- 565 (681)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC----------------
Confidence 999999643211 1223445678999999999977775 3443 589999998654211
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCccc-CCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVF-GPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~-G~~ 174 (358)
+....|+.+|...+.+++.++... |+++.+++|+.+| ++.
T Consensus 566 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~ 609 (681)
T PRK08324 566 PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSG 609 (681)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCc
Confidence 112279999999999999887654 6999999999998 554
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.2e-14 Score=131.34 Aligned_cols=150 Identities=17% Similarity=0.147 Sum_probs=108.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
++||||||+|.||+++++.|++.|++ ... ....+..+.+|++|++++.+++.. ++|+|||+|
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~id~vi~~a 81 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEW-DVDVLLNNA 81 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcC-CCCEEEECC
Confidence 48999999999999999999999873 100 011345668999999999988864 699999999
Q ss_pred cccCCcc---ccccchhhHHHHHHHHHHHHHH----HHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 68 AMVGGLF---HNMSHNLDFFRVNMKINDNVLD----TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 68 ~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~----aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
+...... ...+.....+++|+.++..+.+ .+.+.+.+++|++||...+... |....|
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~----------------~~~~~Y 145 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG----------------PFTGAY 145 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC----------------CCcchh
Confidence 9653211 1112334567888887766554 4455667899999997443211 112279
Q ss_pred HHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 141 SHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
+.+|...|.+.+.+... .|++++++||+.+.
T Consensus 146 ~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 146 CASKHALEAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 99999999888776553 58999999998763
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-14 Score=130.02 Aligned_cols=156 Identities=21% Similarity=0.202 Sum_probs=117.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-C--------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-T--------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
+.++||||||+|.||++++++|+++|++ ... . ...+..+.+|+++++++.++++.. ++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3578999999999999999999999974 110 0 012456689999999998777642 5999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|||+|+...... .........++.|+.++..+++++.. .+ ..++|++||...+... +..
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------~~~ 150 (248)
T TIGR01832 84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG-------------IRV 150 (248)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC-------------CCC
Confidence 999999754211 11234556789999999999998864 23 3589999998776432 111
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
. .|+.+|...+.+++.++... |+++++++|+.+..+.
T Consensus 151 --~-~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 190 (248)
T TIGR01832 151 --P-SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN 190 (248)
T ss_pred --c-hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence 1 69999999999999887764 8999999999887653
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.3e-14 Score=128.41 Aligned_cols=150 Identities=15% Similarity=0.149 Sum_probs=112.5
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------CC-CC-----------ceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------DD-ET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~~-~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
|||||++|+||+++++.|+++|++ .. .. ...+..+.+|++|++++.+++... ++|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 689999999999999999999974 11 00 002346789999999998887642 58999
Q ss_pred EEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeecc-ceecCCCCCCCccccccCCCCCC
Q psy7590 64 IHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLST-CIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 64 ih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~-~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
||+++..... ....+.....++.|+.++.++++++.. .+.++||++||. ++|+..
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~----------------- 143 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA----------------- 143 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-----------------
Confidence 9999975321 122344567889999999999999875 345699999997 444421
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...+.+++.+++. .|+.+++++|+.+.++
T Consensus 144 ~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~ 184 (239)
T TIGR01830 144 GQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTD 184 (239)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCCh
Confidence 1126999999999888777654 4899999999987654
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.3e-14 Score=131.57 Aligned_cols=153 Identities=16% Similarity=0.152 Sum_probs=113.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
|+|+||||+|.||.++++.|+++|++ ... ....+.++.+|+++++++.++++.. .+|++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~l 82 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVV 82 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 58999999999999999999999873 000 0004566789999999998877642 48999
Q ss_pred EEcccccCCcc----ccccchhhHHHHHHHHHHHHHH----HHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 64 IHLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLD----TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 64 ih~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~----aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
||+|+...... .+.+.....+++|+.++..+++ +.++.+..++|++||...+.. .|
T Consensus 83 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~----------------~~ 146 (257)
T PRK07024 83 IANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG----------------LP 146 (257)
T ss_pred EECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC----------------CC
Confidence 99999753211 1223456789999999988776 455566678999999754311 11
Q ss_pred CCcchHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...+.+.+.++. ..|+++++++|+.+.++
T Consensus 147 ~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 187 (257)
T PRK07024 147 GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTP 187 (257)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCc
Confidence 222799999999999887753 35899999999999766
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-14 Score=130.51 Aligned_cols=157 Identities=17% Similarity=0.104 Sum_probs=116.1
Q ss_pred CCCC--CEEEEEcCCChhHHHHHHHHHHcccc------CC---CCceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 1 MAEE--KIILVTGGTGLVGKAIEKIVKEEEKR------DD---ETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 1 m~~~--~~VlItGatG~lG~~l~~~L~~~g~~------~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
||++ +++|||||+|.||+++++.|+++|++ .. .....+.++.+|+.+++++.++++.. ++|+||
T Consensus 1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 80 (252)
T PRK07856 1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV 80 (252)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4553 68999999999999999999999874 11 11123456789999999998888653 589999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh-----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK-----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~-----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
|+|+...... ...+.....+++|+.++..+++++.. .+..++|++||...+.. .+.
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~----------------~~~ 144 (252)
T PRK07856 81 NNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP----------------SPG 144 (252)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC----------------CCC
Confidence 9998643211 12233457889999999999998865 23458999999855321 111
Q ss_pred CcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...|.+++.++.++ .+.+..++|+.+..+
T Consensus 145 ~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~ 183 (252)
T PRK07856 145 TAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTE 183 (252)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccCh
Confidence 2279999999999999987764 278999999888655
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.2e-14 Score=132.72 Aligned_cols=155 Identities=15% Similarity=0.115 Sum_probs=117.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--C-----------ceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--T-----------WIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.+++|||||+|.||+++++.|+++|++ ... . ...+..+.+|+++++++.++++.. +
T Consensus 49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 128 (294)
T PRK07985 49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGG 128 (294)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 368999999999999999999999984 110 0 012345689999999888777642 5
Q ss_pred CcEEEEcccccCC----ccccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 60 PTHVIHLAAMVGG----LFHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 60 ~d~Vih~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|++||+|+.... ...+.++....+++|+.++..+++++... .-.++|++||...+...
T Consensus 129 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~--------------- 193 (294)
T PRK07985 129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS--------------- 193 (294)
T ss_pred CCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC---------------
Confidence 8999999986321 11223455778999999999999998753 12489999998776422
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+++.++.+ .|+++.+++|+.+.++.
T Consensus 194 -~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 194 -PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 11227999999999999888776 48999999999999875
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.9e-13 Score=124.31 Aligned_cols=156 Identities=19% Similarity=0.200 Sum_probs=111.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccC-------CCC-----------ceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRD-------DET-----------WIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~-------~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
+.+.++||||+|+||+++++.|+++|++- ... ...+..+.+|++|.+++.++++.. +
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 45689999999999999999999999730 000 012334579999999998877642 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|+|||+|+..... ....++....+++|+.++..+.+++ .+.+..++|++||......
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--------------- 146 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG--------------- 146 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC---------------
Confidence 89999999974311 1123345678899999966655554 4556779999999743211
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
..... .|+.+|...+.+.+.++++ .|+++.+++|+.+..+.
T Consensus 147 ~~~~~-~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~ 190 (246)
T PRK12938 147 QFGQT-NYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 190 (246)
T ss_pred CCCCh-hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCch
Confidence 11122 7999999888887777654 48999999999887664
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.1e-14 Score=127.82 Aligned_cols=155 Identities=17% Similarity=0.126 Sum_probs=114.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
+|++++||||+|.+|++|+++|+++|++ +... ...+.++.+|+++++++.++++. .++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999999873 1100 11344568999999998888764 259
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+++..... .....+....+++|+.++.++++++ .+.+..++|++||...+...
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------- 149 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF--------------- 149 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC---------------
Confidence 9999999864311 0122344567889999888877776 34456789999999776422
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+.. .|+.+|...+.+.+.+++. .|++++++||+.+-.+
T Consensus 150 ~~~~-~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~ 191 (241)
T PRK07454 150 PQWG-AYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTP 191 (241)
T ss_pred CCcc-HHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCC
Confidence 1112 7999999999988877543 4899999999988655
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=3.1e-14 Score=129.26 Aligned_cols=155 Identities=19% Similarity=0.166 Sum_probs=113.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc---C-C---CC-----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR---D-D---ET-----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~---~-~---~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+++||||||+|+||+++++.|+++|++ . . .. ...+.++.+|+++++++.++++.. ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 358999999999999999999998874 0 1 00 012556789999999998877642 69
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+++..... ....+.....++.|+.++.++++++.. .+.+++|++||...+... +.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-------------~~ 151 (247)
T PRK05565 85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA-------------SC 151 (247)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC-------------CC
Confidence 9999999975311 112233466889999998888877764 445689999998554321 11
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...|+.+|...+.+++.+++. .|+++++++|+.+..+.
T Consensus 152 ---~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~ 192 (247)
T PRK05565 152 ---EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM 192 (247)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence 126999999888887777664 38999999999886553
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-14 Score=135.77 Aligned_cols=168 Identities=17% Similarity=0.097 Sum_probs=115.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------ceeeecccccCCCHHHHHHHHhc-----cCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------WIFVSSKEADLSNLESTQQLFSK-----YKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vih 65 (358)
.++|+||||+|+||.+++++|+++|++ .... ...+..+.+|++|.+++.++++. .++|+|||
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~ 105 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILIN 105 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEE
Confidence 468999999999999999999999974 1110 11255678999999999887753 26999999
Q ss_pred cccccCCcc-ccccchhhHHHHHHHHHHHHHH----HHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 66 LAAMVGGLF-HNMSHNLDFFRVNMKINDNVLD----TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 66 ~a~~~~~~~-~~~~~~~~~~~~nv~~~~~ll~----aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
+|+...... ......+..+.+|+.++..+.+ ++++.+..++|++||....... ...++... ..+..+.. .|
T Consensus 106 nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~--~~~~~~~~-~~~~~~~~-~Y 181 (315)
T PRK06196 106 NAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP--IRWDDPHF-TRGYDKWL-AY 181 (315)
T ss_pred CCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC--CCccccCc-cCCCChHH-HH
Confidence 999754211 1223446678999999555544 5555555699999997543211 11111000 00222223 79
Q ss_pred HHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
+.||...+.+.+.+++. .|+.+++++|+.+.++..
T Consensus 182 ~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~ 219 (315)
T PRK06196 182 GQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQ 219 (315)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcc
Confidence 99999999988877654 489999999999988753
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.6e-13 Score=126.87 Aligned_cols=154 Identities=16% Similarity=0.084 Sum_probs=111.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~ 62 (358)
|+|+||||+|.||++++++|+++|++ .... ...+.++.+|+++++++.++++. .++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999873 1100 11244568999999998887763 26999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHH----HHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDT----SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a----a~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|||+|+...... ...++....+++|+.++..+.++ +.+.+..++|++||...+... +
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----------------~ 144 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG----------------P 144 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC----------------C
Confidence 999999753211 11123344678887777765555 556677799999998654321 1
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
....|+.+|...+.+.+.++.+ .|+++++++|+.+..+.
T Consensus 145 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 186 (270)
T PRK05650 145 AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL 186 (270)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence 1227999999988877777665 38999999999987764
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.4e-14 Score=128.74 Aligned_cols=153 Identities=16% Similarity=0.153 Sum_probs=112.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------C-CCCc-------------eeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------D-DETW-------------IFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~-~~~~-------------~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+|+||||+|+||.++++.|+++|++ . .... ..+..+.+|++|++++.++++.. ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 4899999999999999999999974 1 1110 01223578999999998877642 58
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHH----HHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMK----INDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~----~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+...... ...++....+++|+. +++.+++++++.+.+++|++||...+... +
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~-------------~- 146 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE-------------P- 146 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC-------------C-
Confidence 99999999754211 112233556778887 88888899888877899999998765432 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc-----CceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH-----GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~-----g~~~~ilRp~~v~G~~ 174 (358)
....|+.+|...+.+++.++... +++++.++|+.+.++.
T Consensus 147 --~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~ 190 (251)
T PRK07069 147 --DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGI 190 (251)
T ss_pred --CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcc
Confidence 11269999999999988876542 4889999999888774
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.5e-13 Score=125.98 Aligned_cols=154 Identities=12% Similarity=0.063 Sum_probs=113.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++|+||||+|.||+++++.|.++|++ .... ...+..+.+|+++.+++.+++... ++|
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d 90 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVD 90 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999999999999873 1100 012345589999999988876542 589
Q ss_pred EEEEcccccCCc--cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 62 HVIHLAAMVGGL--FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 62 ~Vih~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
+|||+|+...+. ....+.....++.|+.++.++++++.. .+..++|++||..... +..+
T Consensus 91 ~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------~~~~ 155 (255)
T PRK06113 91 ILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN---------------KNIN 155 (255)
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccC---------------CCCC
Confidence 999999975421 112234455689999999999999863 3445899999975431 1112
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.. .|+.+|...+.+++.++.. .|+.+.++.|+.+--+
T Consensus 156 ~~-~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~ 195 (255)
T PRK06113 156 MT-SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195 (255)
T ss_pred cc-hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccc
Confidence 22 7999999999999888764 4789999999877644
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=4e-14 Score=129.91 Aligned_cols=154 Identities=19% Similarity=0.225 Sum_probs=114.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
++||||||+|.||+++++.|+++|++ .... ...+..+.+|+++++++.++++. .++|
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRID 82 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 48999999999999999999999974 1100 11345668999999998887764 2589
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcC-----CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQG-----VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-----v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+++..... ....+.....+.+|+.++..+++++...- -.++|++||..... +.
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~---------------~~ 147 (256)
T PRK12743 83 VLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT---------------PL 147 (256)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC---------------CC
Confidence 999999975421 11223456789999999999999886532 24899999974321 12
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+.. .|+.+|...+.+++.++.. .|++++.++|+.+..+.
T Consensus 148 ~~~~-~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~ 190 (256)
T PRK12743 148 PGAS-AYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM 190 (256)
T ss_pred CCcc-hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence 2222 7999999999998887664 47999999999998764
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2e-13 Score=124.30 Aligned_cols=154 Identities=14% Similarity=0.189 Sum_probs=110.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.+++|||||+|.||.++++.|+++|++ ...+ ...+..+.+|+++++++.++++.. ++|
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLN 84 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 358999999999999999999999873 1100 112345689999999888777652 589
Q ss_pred EEEEcccccCCc------------cccccchhhHHHHHHHHHHHHHHHHHh----c-CCCEEEEeeccceecCCCCCCCc
Q psy7590 62 HVIHLAAMVGGL------------FHNMSHNLDFFRVNMKINDNVLDTSYK----Q-GVKKVVSCLSTCIFPDKTTYPID 124 (358)
Q Consensus 62 ~Vih~a~~~~~~------------~~~~~~~~~~~~~nv~~~~~ll~aa~~----~-~v~r~V~~SS~~vy~~~~~~~~~ 124 (358)
+|||+++..... ....+.....++.|+.++..+.+++.. . .-.++|++||...|+..
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------ 158 (253)
T PRK08217 85 GLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM------ 158 (253)
T ss_pred EEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC------
Confidence 999999863310 011233455778999999877665443 2 22368999988766432
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 125 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+.. .|+.+|...|.+++.++.. .+++++.++|+.+.++.
T Consensus 159 ----------~~~-~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~ 200 (253)
T PRK08217 159 ----------GQT-NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200 (253)
T ss_pred ----------CCc-hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 112 7999999999998888764 48999999999988764
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-13 Score=125.88 Aligned_cols=154 Identities=19% Similarity=0.234 Sum_probs=111.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------CCCC--------------ceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------DDET--------------WIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
++||||||+|.||.++++.|+++|++ .... ...+..+.+|+++++++.++++..
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 88 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFG 88 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhC
Confidence 68999999999999999999999874 0000 013455689999999998887642
Q ss_pred CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 59 KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++|++||+|+..... ..........+++|+.++..+++++...- ..++++++|+.+....
T Consensus 89 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~--------------- 153 (257)
T PRK12744 89 RPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT--------------- 153 (257)
T ss_pred CCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC---------------
Confidence 689999999974311 12223456788999999999999987541 2356665433221110
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
|....|+.+|...|.+++.++.+. |+++++++|+.+..+.
T Consensus 154 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~ 196 (257)
T PRK12744 154 -PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPF 196 (257)
T ss_pred -CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccch
Confidence 112279999999999999998764 6999999999886653
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.7e-14 Score=126.97 Aligned_cols=155 Identities=15% Similarity=0.112 Sum_probs=113.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC------C-CC------ceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD------D-ET------WIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~------~-~~------~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~ 69 (358)
.++||||||+|.||+++++.|+++|++- . .. ...+..+.+|++|.+++.++++.. ++|++||+|+.
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag~ 85 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAGI 85 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCCC
Confidence 3689999999999999999999998741 1 00 012345579999999988888754 48999999986
Q ss_pred cCCc---cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHH
Q psy7590 70 VGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 70 ~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
.... ..+.++....+++|+.++..++..+... ...++|++||...... +..+.. .|+.+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~--------------~~~~~~-~Y~~sK 150 (237)
T PRK12742 86 AVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM--------------PVAGMA-AYAASK 150 (237)
T ss_pred CCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC--------------CCCCCc-chHHhH
Confidence 4311 1122345678999999999997766654 2358999999743110 111223 799999
Q ss_pred HHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 145 RMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 145 ~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|.+++.++.. .|+.+++++|+.+..+
T Consensus 151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~ 182 (237)
T PRK12742 151 SALQGMARGLARDFGPRGITINVVQPGPIDTD 182 (237)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEecCcccCC
Confidence 9999999887665 4799999999988655
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.1e-14 Score=128.65 Aligned_cols=152 Identities=18% Similarity=0.116 Sum_probs=108.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------ceeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
+++||||||||.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|++||
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999999999999874 1110 012456689999999987777542 5899999
Q ss_pred cccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 66 LAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 66 ~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|+...... ...+.....+++|+.++..+.+++. +.+..++|++||...+... |...
T Consensus 85 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~ 148 (273)
T PRK07825 85 NAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV----------------PGMA 148 (273)
T ss_pred CCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC----------------CCCc
Confidence 999753211 1122345678899998888776664 4566799999998654211 1222
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
.|+.+|...+.+.+.++.. .|+++++++|+.+-
T Consensus 149 ~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~ 184 (273)
T PRK07825 149 TYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVN 184 (273)
T ss_pred chHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCc
Confidence 7999999887766665443 48999999998764
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-13 Score=124.83 Aligned_cols=153 Identities=20% Similarity=0.163 Sum_probs=110.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
+++|||||+|+||++|++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|+
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 58999999999999999999999974 1100 123345689999999988877642 5899
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|||+|+...... ...+.....+++|+.++..+++++... + -.++|++||...+...
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 146 (256)
T PRK08643 83 VVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN---------------- 146 (256)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC----------------
Confidence 999998643111 112234567889999988777776542 2 2479999997543211
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+++.++.+ .|+.++.++|+.+..+
T Consensus 147 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~ 188 (256)
T PRK08643 147 PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTP 188 (256)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCh
Confidence 11227999999999888887664 4899999999988765
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3e-13 Score=123.78 Aligned_cols=158 Identities=14% Similarity=0.113 Sum_probs=114.1
Q ss_pred CCCC--CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc---
Q psy7590 1 MAEE--KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 1 m~~~--~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
||++ ++++||||+|.||.++++.|.+.|++ ...+ ...+..+.+|+++++++.++++..
T Consensus 1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (254)
T PRK07478 1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER 80 (254)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 6653 58999999999999999999999984 1100 012445689999999988887642
Q ss_pred --CCcEEEEcccccCC--c--cccccchhhHHHHHHHHHHHHHH----HHHhcCCCEEEEeeccceecCCCCCCCccccc
Q psy7590 59 --KPTHVIHLAAMVGG--L--FHNMSHNLDFFRVNMKINDNVLD----TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 59 --~~d~Vih~a~~~~~--~--~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
++|++||+|+.... . ....++....+++|+.++..+.+ ..++.+..++|++||...+...
T Consensus 81 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~---------- 150 (254)
T PRK07478 81 FGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG---------- 150 (254)
T ss_pred cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC----------
Confidence 69999999997431 1 11223456688999987766654 4455556689999998654211
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
. +....|+.+|...+.+.+.++.+. |+.+.++.|+.+-.+
T Consensus 151 ----~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 193 (254)
T PRK07478 151 ----F-PGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP 193 (254)
T ss_pred ----C-CCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence 1 112279999999999998887764 699999999988655
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-13 Score=125.07 Aligned_cols=154 Identities=19% Similarity=0.192 Sum_probs=113.6
Q ss_pred CCEEEEEcCCC--hhHHHHHHHHHHcccc------C-----------CCC-----------ceeeecccccCCCHHHHHH
Q psy7590 4 EKIILVTGGTG--LVGKAIEKIVKEEEKR------D-----------DET-----------WIFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 4 ~~~VlItGatG--~lG~~l~~~L~~~g~~------~-----------~~~-----------~~~~~~~~~Dl~~~~~~~~ 53 (358)
+++||||||+| .||.++++.|+++|+. . ... ...+.++.+|+++.+++.+
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 84 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNR 84 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 35899999996 6999999999999873 1 000 0135667899999999888
Q ss_pred HHhc-----cCCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCC
Q psy7590 54 LFSK-----YKPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTY 121 (358)
Q Consensus 54 ~~~~-----~~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~ 121 (358)
+++. .++|+|||+|+...... ....+....+++|+.++..+++++... +..++|++||...+...
T Consensus 85 ~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~--- 161 (256)
T PRK12748 85 VFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM--- 161 (256)
T ss_pred HHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC---
Confidence 7764 25899999998643211 122345667999999999999998653 34589999998665321
Q ss_pred CCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 122 PIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 122 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.... .|+.+|...|.+++.++.. .+++++.++|+.+..+
T Consensus 162 ------------~~~~-~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~ 203 (256)
T PRK12748 162 ------------PDEL-AYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTG 203 (256)
T ss_pred ------------CCch-HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCC
Confidence 1122 6999999999998887665 4899999999876544
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.5e-13 Score=126.14 Aligned_cols=156 Identities=19% Similarity=0.158 Sum_probs=115.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-------CCCCc-----------eeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-------DDETW-----------IFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~~-----------~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
+.++|+||||+|.||+++++.|.++|++ ...+. ..+.++.+|+++++++.++++.. +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3468999999999999999999999874 11110 12445689999999998887642 5
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
+|+|||+++...... ...+.....+++|+.++.++++++... + ..++|++||...++..
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~------------- 151 (260)
T PRK06198 85 LDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ------------- 151 (260)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-------------
Confidence 899999999743211 122233557899999999998888542 2 3479999998776432
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+ ... .|+.+|...|.+.+.++... ++.++.++|+.+.++.
T Consensus 152 ~--~~~-~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 152 P--FLA-AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred C--Ccc-hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 1 112 79999999999988876643 6999999999998875
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-13 Score=125.16 Aligned_cols=154 Identities=18% Similarity=0.164 Sum_probs=113.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------ceeeecccccCCCHHHHHHHHhcc--CCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------WIFVSSKEADLSNLESTQQLFSKY--KPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vih~a~ 68 (358)
|++|+||||+|.||++++++|+++|++ .... ...+.++.+|+++++++.++++.. ++|.+||+|+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 468999999999999999999999984 1100 112445689999999999998763 4789999988
Q ss_pred ccCCccc---cccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccc-eecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 69 MVGGLFH---NMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 69 ~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
....... ..+.....+++|+.++.++++++... +-.++|++||.. .++. |....|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-----------------~~~~~Y~a 143 (240)
T PRK06101 81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL-----------------PRAEAYGA 143 (240)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC-----------------CCCchhhH
Confidence 5421111 12233568999999999999999863 234799998864 3221 12227999
Q ss_pred HHHHHHHHHHHHHh---hcCceEEEEecCcccCCC
Q psy7590 143 AKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 143 sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~~ 174 (358)
+|...+.+.+.++. ..|+++++++|+.++++.
T Consensus 144 sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~ 178 (240)
T PRK06101 144 SKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL 178 (240)
T ss_pred HHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence 99999999887763 458999999999998764
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-13 Score=123.88 Aligned_cols=152 Identities=17% Similarity=0.172 Sum_probs=110.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC--CCceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccccC---C
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD--ETWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMVG---G 72 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~~---~ 72 (358)
++++||||+|.||+++++.|.++|++ .. .....+..+.+|++++ +.++++.. ++|+|||+|+... +
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~id~lv~~ag~~~~~~~ 83 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLSGNFHFLQLDLSDD--LEPLFDWVPSVDILCNTAGILDDYKP 83 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccCCcEEEEECChHHH--HHHHHHhhCCCCEEEECCCCCCCCCC
Confidence 58999999999999999999999874 11 1112345668899887 44444432 5899999998642 1
Q ss_pred -ccccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHH
Q psy7590 73 -LFHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRML 147 (358)
Q Consensus 73 -~~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 147 (358)
.....++....+++|+.++.++++++.. .+..++|++||...+... +....|+.+|...
T Consensus 84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------~~~~~Y~~sK~a~ 147 (235)
T PRK06550 84 LLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG----------------GGGAAYTASKHAL 147 (235)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC----------------CCCcccHHHHHHH
Confidence 1112234567899999999999998864 344589999998554211 1112799999999
Q ss_pred HHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 148 DVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 148 E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+.+.+.++.+. |+++++++|+.+..+.
T Consensus 148 ~~~~~~la~~~~~~gi~v~~v~pg~v~t~~ 177 (235)
T PRK06550 148 AGFTKQLALDYAKDGIQVFGIAPGAVKTPM 177 (235)
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCCccCcc
Confidence 98888777654 8999999999997764
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.7e-13 Score=129.52 Aligned_cols=154 Identities=16% Similarity=0.095 Sum_probs=108.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++|+||||+|.||.++++.|.++|++ .... ...+..+.+|++|++++.++++.. ++|
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD 87 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPID 87 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence 358999999999999999999999974 1100 112345689999999998887642 699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHH----HHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDN----VLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~----ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++||+|+...... ...++....+++|+.++.. +++..++.+..++|++||...+...
T Consensus 88 ~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~---------------- 151 (334)
T PRK07109 88 TWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI---------------- 151 (334)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC----------------
Confidence 9999999643111 1223344567777666555 5555555556789999999776422
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh-----cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ-----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~-----~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++.+ .++.+++++|+.+-.+
T Consensus 152 ~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~ 195 (334)
T PRK07109 152 PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTP 195 (334)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCc
Confidence 11227999999988887766543 3699999999987654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=9e-14 Score=127.69 Aligned_cols=153 Identities=18% Similarity=0.151 Sum_probs=114.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC---------ceeeecccccCCCHHHHHHHHhc------cCCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET---------WIFVSSKEADLSNLESTQQLFSK------YKPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~------~~~d~ 62 (358)
||++|||||||+||++++++|+++|++ .... ...+.++.+|+++.+++.++++. .++|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 468999999999999999999999974 1110 12355678999999998887763 25799
Q ss_pred EEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccc-eecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|||+|+..... ....++....+++|+.++.++++++.. .+..++|++||.. +++..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------------- 144 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP---------------- 144 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC----------------
Confidence 99999975421 112234567899999999999988853 3456899999974 44321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...+.+.+.++.. .++++++++|+.+-.+
T Consensus 145 -~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 145 -GLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred -CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 1126999999999888887654 4799999999887644
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=6e-14 Score=130.00 Aligned_cols=155 Identities=17% Similarity=0.114 Sum_probs=113.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a 67 (358)
||+||||||+|++|+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|+|||+|
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 468999999999999999999999873 1110 012345689999999998877643 689999999
Q ss_pred cccCCc---cccccchhhHHHHHHHHHHHHHHHHHh---cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 68 AMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK---QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 68 ~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
+..... ....++....+++|+.++.++++++.. .+..++|++||...+... |....|+
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~Y~ 144 (274)
T PRK05693 81 GYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT----------------PFAGAYC 144 (274)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC----------------CCccHHH
Confidence 964311 112234567889999999999988754 234579999987543211 1122799
Q ss_pred HHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 142 HAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+|...+.+.+.++.+ .|+++++++|+.+..+.
T Consensus 145 ~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 145 ASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred HHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 9999999988777654 58999999999987653
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5e-13 Score=122.56 Aligned_cols=155 Identities=15% Similarity=0.110 Sum_probs=116.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.|+++||||+|.||+++++.|.++|++ .... ...+..+.+|+++++++.++++.. +
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 88 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDG 88 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999884 1000 123455689999999888777642 5
Q ss_pred CcEEEEcccccCC---ccccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGG---LFHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|+|||+|+.... .....++....+.+|+.++..+++++. +.+..++|++||...+...
T Consensus 89 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-------------- 154 (257)
T PRK09242 89 LHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-------------- 154 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC--------------
Confidence 8999999996321 112334556789999999999988875 3455689999998665322
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+.. .|+.+|...+.+++.++.+ .|++++.++|+.+..+.
T Consensus 155 -~~~~-~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 155 -RSGA-PYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred -CCCc-chHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence 1222 6999999999999887654 38999999999998764
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.7e-13 Score=124.53 Aligned_cols=154 Identities=24% Similarity=0.250 Sum_probs=114.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc--CCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY--KPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~V 63 (358)
||+|+||||+|+||.++++.|+++|++ ... ....+.++.+|+++++++.++++.. ++|+|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 468999999999999999999999973 110 0124566789999999998887642 47999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+++...... .+.++....++.|+.++..+++++.. .+..++|++||...... .+.
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~----------------~~~ 144 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG----------------RAS 144 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC----------------CCC
Confidence 99998643211 12233456789999999999988764 45678999999743211 112
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...+.+.+.++.+ .|+.+++++|+.+.++
T Consensus 145 ~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 145 NYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred CcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence 237999999999888887543 4899999999988765
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=125.43 Aligned_cols=155 Identities=17% Similarity=0.178 Sum_probs=114.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.++||||||+|.||.++++.|+++|++ ...+ ...+..+.+|+++.+++.+++++. ++|+
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~ 94 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDI 94 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999999999999999999999974 0111 113456789999999988888743 5899
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
+||+++...... ...++....++.|+.++..+.+++. +.+..++|++||...+... +
T Consensus 95 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~ 158 (258)
T PRK06935 95 LVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG----------------K 158 (258)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC----------------C
Confidence 999999743211 1223445678899999877776665 4455689999998665321 1
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
....|+.+|...+.+++.++++. |+++++++|+.+..+.
T Consensus 159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 200 (258)
T PRK06935 159 FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN 200 (258)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence 11279999999999999887754 7999999999887653
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=4.5e-13 Score=123.43 Aligned_cols=154 Identities=17% Similarity=0.118 Sum_probs=114.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|+||.++++.|+++|++ .... ...+.++.+|+++++++.++++.. ++|
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 89 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLD 89 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999974 1110 112445689999999998877642 689
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh-----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK-----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~-----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+..... ....++....+.+|+.++.++.+++.. .+..++|++||..... +.
T Consensus 90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~---------------~~ 154 (263)
T PRK07814 90 IVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL---------------AG 154 (263)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC---------------CC
Confidence 999999863311 122344567899999999999999974 4456899999973321 11
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~ 173 (358)
.+.. .|+.+|...+.+++.++.+. ++.++.+.|+.+..+
T Consensus 155 ~~~~-~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~ 195 (263)
T PRK07814 155 RGFA-AYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTS 195 (263)
T ss_pred CCCc-hhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCc
Confidence 1222 79999999999999887764 478889999877544
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.9e-13 Score=123.48 Aligned_cols=154 Identities=21% Similarity=0.151 Sum_probs=114.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.++|+||||+|.||.++++.|+++|++ ... ....+..+.+|++|++++.++++.. +
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 86 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGP 86 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999984 100 1123446689999999998887642 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+|+..... ....++....+++|+.++..+++++.. .+..++|++||...+..
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------- 151 (260)
T PRK07063 87 LDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI--------------- 151 (260)
T ss_pred CcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC---------------
Confidence 99999999964211 112234566788999999888888753 34568999999854321
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.+....|+.+|...+.+.+.++.+. |+.+..++|+.+-.+
T Consensus 152 -~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 152 -IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence 1122279999999999998887654 799999999887544
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3e-13 Score=124.58 Aligned_cols=154 Identities=18% Similarity=0.227 Sum_probs=113.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.++++||||+|.||+++++.|+++|++ .... ...+.++.+|+++++++.++++.. ++|++|
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv 85 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILV 85 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 468999999999999999999999974 1110 112456689999999998887652 689999
Q ss_pred EcccccCC--ccccccchhhHHHHHHHHHHHHHHHHHh---cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 65 HLAAMVGG--LFHNMSHNLDFFRVNMKINDNVLDTSYK---QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 65 h~a~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~aa~~---~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+|+.... .....+.....+++|+.++..+++++.. .+-.++|++||...+... +....
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------------~~~~~ 149 (261)
T PRK08265 86 NLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ----------------TGRWL 149 (261)
T ss_pred ECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC----------------CCCch
Confidence 99986431 1122344567889999999999888764 233589999998543211 11227
Q ss_pred hHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
|+.+|...+.+.+.++.+ .|+++.+++|+.+..+
T Consensus 150 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 150 YPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSR 186 (261)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccCh
Confidence 999999999998887765 3799999999876544
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=7.4e-13 Score=121.27 Aligned_cols=155 Identities=15% Similarity=0.144 Sum_probs=114.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++|+||||+|.||+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|
T Consensus 11 ~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 90 (256)
T PRK06124 11 GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLD 90 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 578999999999999999999999884 1100 112456689999999988877642 579
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++..... ....++....++.|+.++..+.+++.. .+..++|++||...+...
T Consensus 91 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------- 154 (256)
T PRK06124 91 ILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR---------------- 154 (256)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC----------------
Confidence 999999964321 112234456789999999999976654 566799999998543211
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+++.++.. .++.+.+++|+.+..+.
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 155 AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 11127999999999888877654 37999999999998874
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.3e-13 Score=122.14 Aligned_cols=155 Identities=14% Similarity=0.065 Sum_probs=114.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
.+++|||||+|.||++++++|+++|++ .... ...+..+.+|+++++++.+++.. .++|
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 88 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPID 88 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCC
Confidence 458999999999999999999999974 1100 11234567999999999887764 2589
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++..... .....+....+++|+.++..+++++.. .+..++|++||..... +..
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------~~~ 153 (254)
T PRK08085 89 VLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL---------------GRD 153 (254)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhcc---------------CCC
Confidence 999999964311 112234456899999999888888765 3456899999974321 111
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+.. .|+.+|...+.+++.++.+. |+++..++|+.+..+.
T Consensus 154 ~~~-~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~ 195 (254)
T PRK08085 154 TIT-PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM 195 (254)
T ss_pred CCc-chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence 122 79999999999999987653 8999999999888764
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.8e-13 Score=122.86 Aligned_cols=154 Identities=19% Similarity=0.166 Sum_probs=111.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|+||.+++++|.++|++ .... ...+..+.+|+.+.+++.++++.. ++|
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 87 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLD 87 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 368999999999999999999999974 1000 112345689999999988777642 589
Q ss_pred EEEEcccccCC----ccccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGG----LFHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+.... .....+.....+++|+.++..+++++ ++.+..++|++||...+.. .
T Consensus 88 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------~ 152 (252)
T PRK07035 88 ILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP---------------G 152 (252)
T ss_pred EEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC---------------C
Confidence 99999985321 11122334568889999988887776 4445678999998743321 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.+.. .|+.+|...|.+++.++.+. |++++.+.|+.+-.+
T Consensus 153 ~~~~-~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~ 194 (252)
T PRK07035 153 DFQG-IYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTK 194 (252)
T ss_pred CCCc-chHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCc
Confidence 1222 79999999999999887653 899999999887544
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-13 Score=129.31 Aligned_cols=166 Identities=15% Similarity=0.053 Sum_probs=113.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
++|+||||+|+||++++++|+++|++ ... ....+.++.+|++|.+++.++++.. ++
T Consensus 17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 96 (306)
T PRK06197 17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRI 96 (306)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCC
Confidence 58999999999999999999999973 100 0123456689999999998887642 58
Q ss_pred cEEEEcccccCCcc-ccccchhhHHHHHHHH----HHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 61 THVIHLAAMVGGLF-HNMSHNLDFFRVNMKI----NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 61 d~Vih~a~~~~~~~-~~~~~~~~~~~~nv~~----~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|+|||+|+...+.. ...+.....+++|+.+ +..+++.+++.+..++|++||...+.... .+.++..+ ..+..+
T Consensus 97 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~-~~~~~~~~-~~~~~~ 174 (306)
T PRK06197 97 DLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAA-IHFDDLQW-ERRYNR 174 (306)
T ss_pred CEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCC-CCccccCc-ccCCCc
Confidence 99999999754321 1223446678999999 77777777777667999999986442111 11111110 002223
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc---CceEE--EEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH---GVTYT--SVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~--ilRp~~v~G~ 173 (358)
.. .|+.||+..+.+.+.++.+. |++++ .+.||.|..+
T Consensus 175 ~~-~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 175 VA-AYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 33 79999999999998887764 55444 4468877654
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.5e-13 Score=122.28 Aligned_cols=150 Identities=16% Similarity=0.107 Sum_probs=113.9
Q ss_pred EEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-CCcEEEEccccc
Q psy7590 8 LVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMV 70 (358)
Q Consensus 8 lItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~ 70 (358)
|||||+|++|++++++|+++|++ .... ...+.++.+|+++++++.++++.. ++|++||+++..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 69999999999999999999974 1000 123556789999999999999864 479999999874
Q ss_pred CCc---cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHH
Q psy7590 71 GGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRML 147 (358)
Q Consensus 71 ~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 147 (358)
... ....++....+++|+.++.++.++....+..++|++||...+... .+.. .|+.+|...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~---------------~~~~-~Y~~sK~a~ 144 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS---------------ASGV-LQGAINAAL 144 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC---------------Ccch-HHHHHHHHH
Confidence 321 112345667899999999999997766666799999999776421 1222 799999999
Q ss_pred HHHHHHHHhhc-CceEEEEecCcccCC
Q psy7590 148 DVLNKAYYQQH-GVTYTSVIPCNVFGP 173 (358)
Q Consensus 148 E~~~~~~~~~~-g~~~~ilRp~~v~G~ 173 (358)
+.+.+.++... +++++.+.|+.+-.+
T Consensus 145 ~~~~~~la~e~~~irv~~i~pg~~~t~ 171 (230)
T PRK07041 145 EALARGLALELAPVRVNTVSPGLVDTP 171 (230)
T ss_pred HHHHHHHHHHhhCceEEEEeecccccH
Confidence 99998887664 578888888876543
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.4e-14 Score=127.40 Aligned_cols=153 Identities=14% Similarity=0.058 Sum_probs=110.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------ceeeecccccCCCHHHHHHHHhc---------cCCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------WIFVSSKEADLSNLESTQQLFSK---------YKPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------~~~~~~~~~Dl~~~~~~~~~~~~---------~~~d~ 62 (358)
||+||||||||.||++++++|+++|++ .... ...+.++.+|+.+++++.+++.. .++|+
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 458999999999999999999999974 1110 11345678999999998885543 25899
Q ss_pred EEEcccccCCcc----ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+||+++...+.. ...+.....+++|+.++..+.+.+.+ .+..++|++||...+.. ..
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------~~ 145 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA---------------YA 145 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC---------------CC
Confidence 999999753210 11233467788999996666655543 44568999999866431 11
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh--cCceEEEEecCcccC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ--HGVTYTSVIPCNVFG 172 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~--~g~~~~ilRp~~v~G 172 (358)
+.. .|+.+|...|.+++.++.. .++++.+++|+.+-.
T Consensus 146 ~~~-~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 146 GWS-VYCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred Cch-HHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 222 7999999999999988754 479999999987743
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-12 Score=120.59 Aligned_cols=154 Identities=18% Similarity=0.181 Sum_probs=115.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
.++++||||+|.||.+++++|+++|++ .... ...+..+.+|+++++++.+++.. .++|
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVID 89 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 368999999999999999999999984 1100 11244568999999999888864 2589
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccc-eecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+..... ....+.....+++|+.++..+.+++.. .+..++|++||.. .++.
T Consensus 90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 153 (265)
T PRK07097 90 ILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR---------------- 153 (265)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCC----------------
Confidence 999999975421 122334566788999998877777654 4566899999973 3321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+++.++.+. |+.++.++|+.+..+.
T Consensus 154 -~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (265)
T PRK07097 154 -ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ 196 (265)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence 112279999999999999987764 8999999999998764
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.8e-13 Score=121.75 Aligned_cols=154 Identities=18% Similarity=0.104 Sum_probs=113.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++|+||||+|.||++++++|+++|++ .... ...+..+.+|+++.+++.++++.. ++|
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id 86 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLD 86 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 368999999999999999999999873 1100 012455689999999998877643 579
Q ss_pred EEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+++..... ....++....+++|+.++..+++++. +.+..++|++||...+...
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~--------------- 151 (253)
T PRK06172 87 YAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA--------------- 151 (253)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC---------------
Confidence 999999964211 11234456678899999977766543 4455689999998665321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++.+. |+++.++.|+.+-.+
T Consensus 152 -~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~ 193 (253)
T PRK06172 152 -PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTD 193 (253)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccCh
Confidence 112279999999999998887764 799999999877544
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-12 Score=121.61 Aligned_cols=154 Identities=17% Similarity=0.111 Sum_probs=113.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~ 62 (358)
++++||||+|.||+++++.|+++|++ .... ...+..+.+|+.+++++.++++. .++|+
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~ 90 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDI 90 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 58999999999999999999999974 1100 11244568999999988887764 26999
Q ss_pred EEEcccccCCcc------------------ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCC
Q psy7590 63 VIHLAAMVGGLF------------------HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTT 120 (358)
Q Consensus 63 Vih~a~~~~~~~------------------~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~ 120 (358)
|||+|+...+.. ...++....+++|+.++..+++++ .+.+..++|++||...+...
T Consensus 91 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-- 168 (278)
T PRK08277 91 LINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL-- 168 (278)
T ss_pred EEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC--
Confidence 999999543210 112335567889999887665554 44455689999998765321
Q ss_pred CCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 121 ~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.+.. .|+.+|...+.+++.++.+. |+++.+++|+.+..+.
T Consensus 169 -------------~~~~-~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 169 -------------TKVP-AYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred -------------CCCc-hhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 1122 79999999999998887765 7999999999998774
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.53 E-value=6.4e-13 Score=120.31 Aligned_cols=155 Identities=23% Similarity=0.213 Sum_probs=110.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
+++|||||+|.||+++++.|+++|++ .... ...+..+.+|+++++++.++++. .++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 47999999999999999999999873 1100 11344678999999988887754 2589
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHH----HHhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDT----SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+++..... .....+....++.|+.++..++++ +++.+.+++|++||....... +
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-------------~-- 145 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-------------F-- 145 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-------------C--
Confidence 999999864321 112234456788999987775444 455667799999997432111 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
... .|+.+|...+.+++.++++ .+++++.++|+.+.++..
T Consensus 146 ~~~-~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~ 188 (242)
T TIGR01829 146 GQT-NYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMV 188 (242)
T ss_pred Ccc-hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccc
Confidence 112 6999999888887776554 489999999999887643
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.5e-13 Score=124.22 Aligned_cols=152 Identities=18% Similarity=0.155 Sum_probs=113.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC--CCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD--ETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~ 70 (358)
.++||||||+|.||+++++.|+++|++ .. .....+..+.+|+++++++.++++.. ++|+|||+|+..
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~ 88 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGIN 88 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 368999999999999999999999984 11 11123445689999999998887642 689999999964
Q ss_pred CCc------------cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 71 GGL------------FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 71 ~~~------------~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
... ....++....+++|+.++..+++++... +..++|++||...+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 152 (266)
T PRK06171 89 IPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS---------------- 152 (266)
T ss_pred CCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------------
Confidence 311 0122334568899999999999988753 33579999998654221
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
+....|+.+|...+.+++.++.+ .|+++.++.|+.+-
T Consensus 153 ~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 153 EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 11127999999999999888765 48999999999874
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.2e-12 Score=120.01 Aligned_cols=154 Identities=20% Similarity=0.174 Sum_probs=108.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc------CCCC-------------ceeeecccccCCCHHHHHHHHhc----cC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR------DDET-------------WIFVSSKEADLSNLESTQQLFSK----YK 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~----~~ 59 (358)
.++|+||||+|.||++++++|+++| +. .... ...+.++.+|++|++++.++++. .+
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~ 87 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD 87 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence 4689999999999999999999985 42 2111 01355678999999987665543 26
Q ss_pred CcEEEEcccccCCccccccch---hhHHHHHHHHHHH----HHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGLFHNMSHN---LDFFRVNMKINDN----VLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~~~~~---~~~~~~nv~~~~~----ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+++........+.+. ...+++|+.++.. +++++.+.+..++|++||...+..
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~--------------- 152 (253)
T PRK07904 88 VDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV--------------- 152 (253)
T ss_pred CCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC---------------
Confidence 999999988754211112222 2468999987765 677777777789999999854221
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~ 173 (358)
.+....|+.||+....+.+.+.. .+|+++++++|+.+..+
T Consensus 153 -~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~ 195 (253)
T PRK07904 153 -RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR 195 (253)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence 11122699999998866655533 45899999999988653
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.7e-13 Score=124.52 Aligned_cols=155 Identities=16% Similarity=0.125 Sum_probs=112.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
.++|+||||+|.||.++++.|+++|++ .... ...+..+.+|++|++++.++++. .++|
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id 119 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVD 119 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999873 1100 11234568999999999888873 1689
Q ss_pred EEEEcccccCCccc-----cccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 62 HVIHLAAMVGGLFH-----NMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 62 ~Vih~a~~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|||+||....... .+......+++|+.++..+++++. +.+..++|++||.+++...
T Consensus 120 ~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 185 (293)
T PRK05866 120 ILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA-------------- 185 (293)
T ss_pred EEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--------------
Confidence 99999997532111 112335678899999877777654 5566799999997665321
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+++.++.+ .|+.+++++|+.+-.+
T Consensus 186 -~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~ 228 (293)
T PRK05866 186 -SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP 228 (293)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence 111227999999999888887655 3899999999866433
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.1e-12 Score=118.36 Aligned_cols=157 Identities=13% Similarity=0.078 Sum_probs=113.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.+++|||||+|.||+++++.|.++|++ .... ...+..+.+|++|++++.++++.. ++
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 87 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGAL 87 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999974 1111 012345689999999998887642 57
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+...... ...++....+++|+.++..+++++. +.+..++|++||...+... +.
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------~~ 154 (254)
T PRK06114 88 TLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN-------------RG 154 (254)
T ss_pred CEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-------------CC
Confidence 99999999753211 1223456678899999977766654 4455689999997543211 00
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+++.++.+ .|+++.+++|+.+..+.
T Consensus 155 -~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~ 197 (254)
T PRK06114 155 -LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM 197 (254)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence 01126999999999888888764 48999999999887764
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.8e-13 Score=122.53 Aligned_cols=154 Identities=16% Similarity=0.157 Sum_probs=110.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC-CC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD-ET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~-~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
++||||||+|+||+++++.|+++|++ .. .. ...+..+.+|+++++++.++++.. ++|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 48999999999999999999999863 00 00 012446689999999988877642 599
Q ss_pred EEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhc-CC------CEEEEeeccc-eecCCCCCCCcccccc
Q psy7590 62 HVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQ-GV------KKVVSCLSTC-IFPDKTTYPIDETMVH 129 (358)
Q Consensus 62 ~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~v------~r~V~~SS~~-vy~~~~~~~~~E~~~~ 129 (358)
+|||+|+..... ....++....+.+|+.++..+++++... .. .++|++||.. +++..
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------- 151 (248)
T PRK06947 83 ALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP----------- 151 (248)
T ss_pred EEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-----------
Confidence 999999974321 1122233567899999998887654432 21 2599999974 33321
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.... .|+.+|...+.+++.++.+. |+.+++++|+.+..+.
T Consensus 152 ----~~~~-~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~ 194 (248)
T PRK06947 152 ----NEYV-DYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI 194 (248)
T ss_pred ----CCCc-ccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence 1112 69999999999988887764 7999999999987764
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.8e-12 Score=123.61 Aligned_cols=155 Identities=16% Similarity=0.163 Sum_probs=110.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
.++||||||+|.||+++++.|.++|++ .... ...+..+.+|++|++++.++++. .++|
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 86 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRID 86 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 358999999999999999999999984 1100 11234557899999999888753 2689
Q ss_pred EEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++||+|+....... ..+.....+++|+.++.++.+++. +.+..++|++||...+...
T Consensus 87 ~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~---------------- 150 (330)
T PRK06139 87 VWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ---------------- 150 (330)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC----------------
Confidence 99999996432111 122345679999999988877764 3444589999998654321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh----cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~~ 174 (358)
|....|+.+|...+.+.+.++.+ .++.++.+.|+.+..+.
T Consensus 151 p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~ 194 (330)
T PRK06139 151 PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG 194 (330)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence 22227999999766666655443 37999999999887664
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.6e-13 Score=121.68 Aligned_cols=155 Identities=17% Similarity=0.121 Sum_probs=113.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.++++||||+|.||+++++.|+++|++ ... ....+.++.+|+++++++.++++.. ++|+
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~ 85 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI 85 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 368999999999999999999999974 110 0112345689999999998887752 6899
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|||+|+...... .........+++|+.++..+++++.. .+..++|++||..... .+.+
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~---------------~~~~ 150 (263)
T PRK08226 86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM---------------VADP 150 (263)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc---------------cCCC
Confidence 999999743211 11123345788999999999988764 3456899999864310 1112
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...|.+++.++... |++++.++|+.+.++
T Consensus 151 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~ 191 (263)
T PRK08226 151 GETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTP 191 (263)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCH
Confidence 22279999999999998887654 799999999988776
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.9e-13 Score=120.06 Aligned_cols=154 Identities=16% Similarity=0.195 Sum_probs=112.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
++++||||+|.||++++++|+++|++ ... ....+.++.+|+++++++.++++.. ++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL 82 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999863 100 0123456689999999988877642 59
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+...... .........+++|+.++..+++++. +.+..++|++||...+... +
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------~ 148 (248)
T PRK08251 83 DRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL--------------P 148 (248)
T ss_pred CEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC--------------C
Confidence 99999999743211 1123345678899999988888774 4466789999997443211 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+.. .|+.+|...+.+.+.+..+ .++.+++++|+.+.++
T Consensus 149 ~~~~-~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~ 190 (248)
T PRK08251 149 GVKA-AYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSE 190 (248)
T ss_pred CCcc-cHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcch
Confidence 1122 6999999999888877654 3789999999988654
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=119.59 Aligned_cols=152 Identities=20% Similarity=0.166 Sum_probs=110.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
++++||||+|.||.+|++.|++.|.+ ... ....+..+.+|++|++++.+++... ++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999874 110 0113456689999999998877542 5899
Q ss_pred EEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccce-ecCCCCCCCccccccCCCC
Q psy7590 63 VIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCI-FPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 63 Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~v-y~~~~~~~~~E~~~~~~~~ 133 (358)
|||+++..... ....+.....+++|+.++..+++++.. .+ ..++|++||... ++.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 144 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN---------------- 144 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC----------------
Confidence 99999874321 112233456799999998877776653 23 258999998743 321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+++.++.+. ++.+++++|+.+..+
T Consensus 145 -~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 145 -PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence 112279999999999998776653 799999999977544
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=120.75 Aligned_cols=152 Identities=17% Similarity=0.159 Sum_probs=110.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
++||||||+|.||.+++++|+++|++ .... ...+.++.+|+++++++.++++.. ++|+
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~ 89 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDV 89 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 58999999999999999999999973 1000 012345689999999998887652 5899
Q ss_pred EEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 63 VIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 63 Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
|||+|+..... ....++....+++|+.++.++++++... .-.++|++||...+.. .+.
T Consensus 90 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~----------------~~~ 153 (264)
T PRK07576 90 LVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP----------------MPM 153 (264)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC----------------CCC
Confidence 99999753211 1122334567889999999999988653 1248999999754311 122
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
...|+.+|...|.+++..+.+ .|++++.++|+.+.+
T Consensus 154 ~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 154 QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence 227999999999999887665 379999999998765
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.7e-13 Score=120.70 Aligned_cols=154 Identities=17% Similarity=0.163 Sum_probs=106.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC---------CCceeeecccccCCCHHHHHHHHhcc---------C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD---------ETWIFVSSKEADLSNLESTQQLFSKY---------K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~---------~~~~~~~~~~~Dl~~~~~~~~~~~~~---------~ 59 (358)
||+||||||+|.||++|+++|+++|++ .. .....+..+.+|+++++++.++++.. +
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 368999999999999999999999973 11 01123456689999999998888642 1
Q ss_pred CcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHH----HhcC-CCEEEEeeccceecCCCCCCCccccccC
Q psy7590 60 PTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTS----YKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 60 ~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
..++||+|+...+. ....+.....+++|+.+...+++++ ++.+ .+++|++||...+.
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-------------- 146 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-------------- 146 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC--------------
Confidence 22789999864321 1122334556777888755555544 3333 45899999976532
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh-----cCceEEEEecCcccCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ-----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~-----~g~~~~ilRp~~v~G~ 173 (358)
+..+ ...|+.+|...+.+++.++.+ .++.+..++|+.+-.+
T Consensus 147 -~~~~-~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 147 -PYFG-WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred -CCCC-cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 1122 237999999999999888654 3789999999876543
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.4e-13 Score=123.54 Aligned_cols=156 Identities=15% Similarity=0.170 Sum_probs=110.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc------eeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW------IFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
++++|+||||+|+||.+++++|+++|++ ..... ....++.+|+++++++.++++.. ++|+|||
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3578999999999999999999999874 11100 11135689999999998888742 5899999
Q ss_pred cccccCCcc-----ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeecc-ceecCCCCCCCccccccCCCCCC
Q psy7590 66 LAAMVGGLF-----HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLST-CIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 66 ~a~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~-~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
+|+...+.. ...+.....+++|+.++..+++++. +.+..++|++||. ++++.. .+
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~---------------~~ 150 (255)
T PRK06057 86 NAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA---------------TS 150 (255)
T ss_pred CCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC---------------CC
Confidence 998643210 1122356788899999877777664 3445589999886 454421 11
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.. .|+.+|+..+.+.+..+.. .|+.+++++|+.+.++.
T Consensus 151 ~~-~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 191 (255)
T PRK06057 151 QI-SYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL 191 (255)
T ss_pred Cc-chHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence 12 6999998777666654332 38999999999998764
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=120.15 Aligned_cols=156 Identities=15% Similarity=0.082 Sum_probs=111.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.+++|||||+|.||.++++.|+++|++ ... ....+..+.+|+++++++.++++.. ++|
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 88 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGID 88 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999974 110 0112445689999999998887642 699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+|+...... ...+.....+++|+.++..+++++... + -.++|++||....-.. .+
T Consensus 89 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------~~ 155 (253)
T PRK05867 89 IAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN-------------VP 155 (253)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC-------------CC
Confidence 9999999743211 112234557789999999999988542 2 2368888887432100 01
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.... .|+.+|...+.+.+.++... |+++..+.|+.+-.+
T Consensus 156 ~~~~-~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~ 197 (253)
T PRK05867 156 QQVS-HYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTE 197 (253)
T ss_pred CCcc-chHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCc
Confidence 1112 69999999999998887653 899999999988554
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=7.7e-12 Score=118.44 Aligned_cols=165 Identities=16% Similarity=0.045 Sum_probs=116.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.++++||||+|.||.++++.|+++|++ ... ....+.++.+|+.+.+++.++++.. +
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~ 93 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRP 93 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999984 100 0113456689999999998887642 5
Q ss_pred CcEEEEcccccCCcc--ccccchhhHHHHHHHHHHHHHHHHHh---cCCCEEEEeecccee-cCCCCCCCccccccCCCC
Q psy7590 60 PTHVIHLAAMVGGLF--HNMSHNLDFFRVNMKINDNVLDTSYK---QGVKKVVSCLSTCIF-PDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~--~~~~~~~~~~~~nv~~~~~ll~aa~~---~~v~r~V~~SS~~vy-~~~~~~~~~E~~~~~~~~ 133 (358)
+|++||+||...... ...+..+..+.+|+.+...+.+.+.. .+..|+|++||...+ +......+.++. +.
T Consensus 94 iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~----~~ 169 (313)
T PRK05854 94 IHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWER----SY 169 (313)
T ss_pred ccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccc----cC
Confidence 899999999764321 23345667899999998777776652 233589999998543 221111222222 22
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh-----cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ-----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~-----~g~~~~ilRp~~v~G~ 173 (358)
.+.. .|+.||...+.+.++++++ .|+.+..+-||.+-.+
T Consensus 170 ~~~~-~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 170 AGMR-AYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred cchh-hhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 2333 7999999999999988763 3799999999988544
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.9e-13 Score=121.04 Aligned_cols=156 Identities=13% Similarity=0.092 Sum_probs=115.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++|+||||+|+||+++++.|+++|++ ...+ ...+..+.+|+++++++.++++.. ++|
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTID 88 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999999999873 1100 112456689999999998887642 589
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----C--------CCEEEEeeccceecCCCCCCCccc
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G--------VKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~--------v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
+|||+++..... ..........++.|+.++..+++++... . ..++|++||...+...
T Consensus 89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------- 160 (258)
T PRK06949 89 ILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL-------- 160 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC--------
Confidence 999999964311 0112345668899999999999887532 1 2489999998654211
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
.+.. .|+.+|...+.+++.++.+ .++++++++|+.++++..
T Consensus 161 -------~~~~-~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 161 -------PQIG-LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -------CCcc-HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 1122 7999999999999888765 489999999999988753
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.8e-12 Score=119.25 Aligned_cols=153 Identities=16% Similarity=0.107 Sum_probs=106.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.++||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. +
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 87 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDR 87 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 368999999999999999999999873 000 0112345689999999998888642 5
Q ss_pred CcEEEEcccccCCc---------cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccc
Q psy7590 60 PTHVIHLAAMVGGL---------FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---------~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
+|++||+|+..+.. ..........+++|+.+...+.+.+ ++.+..++|++||...+..
T Consensus 88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------- 158 (260)
T PRK08416 88 VDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY--------- 158 (260)
T ss_pred ccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC---------
Confidence 89999999854210 0111233456777777766555544 3334458999999743211
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFG 172 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G 172 (358)
.|....|+.+|...+.+++.++.++ |+.+..+.|+.+--
T Consensus 159 -------~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T 200 (260)
T PRK08416 159 -------IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDT 200 (260)
T ss_pred -------CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccC
Confidence 1112279999999999999888764 89999999987743
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=7.1e-13 Score=118.95 Aligned_cols=156 Identities=15% Similarity=0.047 Sum_probs=114.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhc---cCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSK---YKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~Vih~a~~ 69 (358)
|++++||||+|.||+++++.|+++|++ .... ...++.+.+|+++.+++.+++.. .++|+|||+++.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 468999999999999999999999874 1110 11234678999999998887543 258999999997
Q ss_pred cCCc-----cccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeecc-ceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 70 VGGL-----FHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLST-CIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 70 ~~~~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~-~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
.... ....++....++.|+.++.++++++... ...++|++||. ++++.. +..+.. .|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------~~~~~~-~Y 146 (222)
T PRK06953 81 YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDA-------------TGTTGW-LY 146 (222)
T ss_pred ccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccc-------------cCCCcc-cc
Confidence 5311 1133455778999999999999999752 23478888886 444422 111112 69
Q ss_pred HHHHHHHHHHHHHHHhhc-CceEEEEecCcccCC
Q psy7590 141 SHAKRMLDVLNKAYYQQH-GVTYTSVIPCNVFGP 173 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~ 173 (358)
+.+|...+.+++.++... ++.++.++|+.+.-+
T Consensus 147 ~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 147 RASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred HHhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 999999999999887664 788999999987655
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-12 Score=118.94 Aligned_cols=155 Identities=17% Similarity=0.193 Sum_probs=107.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCC--HHHHHHHHh----c--
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSN--LESTQQLFS----K-- 57 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~--~~~~~~~~~----~-- 57 (358)
.++|+||||+|++|.++++.|+++|++ ...+ ...+..+.+|+.+ .+++.++++ .
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~ 85 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQ 85 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhC
Confidence 368999999999999999999999874 1100 0112344678765 334444332 1
Q ss_pred cCCcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 58 YKPTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
.++|+|||+|+..... ....++....+++|+.++.++++++.+ .+..++|++||....
T Consensus 86 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-------------- 151 (239)
T PRK08703 86 GKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE-------------- 151 (239)
T ss_pred CCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc--------------
Confidence 2589999999964310 112234455789999998888888754 345689999986432
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhc----CceEEEEecCcccCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQH----GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~----g~~~~ilRp~~v~G~~ 174 (358)
.+.+....|+.+|...+.+++.++.+. ++++++++||.|.++.
T Consensus 152 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 152 --TPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred --cCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 111222279999999999998887764 5999999999998874
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3.2e-12 Score=115.63 Aligned_cols=151 Identities=13% Similarity=0.113 Sum_probs=109.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC------ceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a 67 (358)
|++|||||+|.||+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|++||+|
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a 82 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNA 82 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECC
Confidence 48999999999999999999999974 1111 012345689999999988877652 489999999
Q ss_pred cccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 68 AMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 68 ~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+..... ....++....+++|+.++..+.+++.. .+ ..++|++||..... ..+...
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~----------------~~~~~~ 146 (236)
T PRK06483 83 SDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEK----------------GSDKHI 146 (236)
T ss_pred ccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhcc----------------CCCCCc
Confidence 964321 112334567888999998877666654 22 34799998874321 111122
Q ss_pred chHHHHHHHHHHHHHHHhhc--CceEEEEecCccc
Q psy7590 139 GYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVF 171 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~ 171 (358)
.|+.+|...|.+++.++... ++.+.++.|+.+.
T Consensus 147 ~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 147 AYAASKAALDNMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcee
Confidence 79999999999999988875 5899999999874
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-12 Score=117.81 Aligned_cols=154 Identities=18% Similarity=0.141 Sum_probs=110.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhcc----CCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKY----KPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~V 63 (358)
.++||||||+|+||.+++++|+++|++ ... ....+.++.+|++|++++.++++.. ++|+|
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~l 84 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVL 84 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEE
Confidence 468999999999999999999999984 100 0113456689999999988777632 58999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+|+...... ...+.....+++|+.++.++++++.. .+..++|++||...+.. .+.
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~~ 148 (263)
T PRK09072 85 INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG----------------YPG 148 (263)
T ss_pred EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC----------------CCC
Confidence 99998743210 12233456788999999999988864 33457888888743211 111
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...+.+++.++.+ .++.++.+.|+.+..+
T Consensus 149 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~ 188 (263)
T PRK09072 149 YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTA 188 (263)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccc
Confidence 227999999988888777654 3789999999876543
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.4e-12 Score=113.52 Aligned_cols=149 Identities=17% Similarity=0.097 Sum_probs=107.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccccCCcc---ccccch
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMVGGLF---HNMSHN 80 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~~~~~---~~~~~~ 80 (358)
|+++||||+|.||.++++.|.++ ++-.........+.+|+++++++.++++.. ++|+|||+|+...... ...++.
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~ 79 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDF 79 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHH
Confidence 38999999999999999999987 420000000014578999999999998864 6999999999643211 122345
Q ss_pred hhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh-
Q psy7590 81 LDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ- 157 (358)
Q Consensus 81 ~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~- 157 (358)
...+++|+.++.++.+++... +..+++++||..... +.|....|+.+|...+.+.+.++.+
T Consensus 80 ~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~----------------~~~~~~~Y~~sK~a~~~~~~~la~e~ 143 (199)
T PRK07578 80 NVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE----------------PIPGGASAATVNGALEGFVKAAALEL 143 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC----------------CCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 567889999999999988753 224789888864321 1122227999999999998887764
Q ss_pred -cCceEEEEecCcc
Q psy7590 158 -HGVTYTSVIPCNV 170 (358)
Q Consensus 158 -~g~~~~ilRp~~v 170 (358)
.|+.+..+.|+.+
T Consensus 144 ~~gi~v~~i~Pg~v 157 (199)
T PRK07578 144 PRGIRINVVSPTVL 157 (199)
T ss_pred cCCeEEEEEcCCcc
Confidence 4899999999866
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.6e-12 Score=106.69 Aligned_cols=194 Identities=19% Similarity=0.207 Sum_probs=135.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCc---eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETW---IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 75 (358)
|||.|+||||.+|++|+++.+++||. +..+. ..+..++.|+.|++++.+.+. +.|+||..-+...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~--g~DaVIsA~~~~~---- 74 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLA--GHDAVISAFGAGA---- 74 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeecccccChhhhHhhhc--CCceEEEeccCCC----
Confidence 58999999999999999999999994 22222 556678999999999999999 5899997655431
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc-ceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHH
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST-CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~-~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 154 (358)
.++.... ......|++..++++++|++.++.. +-|-+.....+ ++ |.-|.. .|..++..+|.+ ..+
T Consensus 75 --~~~~~~~---~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLv--D~----p~fP~e-y~~~A~~~ae~L-~~L 141 (211)
T COG2910 75 --SDNDELH---SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLV--DT----PDFPAE-YKPEALAQAEFL-DSL 141 (211)
T ss_pred --CChhHHH---HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceee--cC----CCCchh-HHHHHHHHHHHH-HHH
Confidence 2222222 3347789999999999999988877 34433322222 22 444544 477788777754 333
Q ss_pred HhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccc
Q psy7590 155 YQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFC 234 (358)
Q Consensus 155 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (358)
....+++||.+-|+..|-|+..... .
T Consensus 142 r~~~~l~WTfvSPaa~f~PGerTg~------------------------------------------------------y 167 (211)
T COG2910 142 RAEKSLDWTFVSPAAFFEPGERTGN------------------------------------------------------Y 167 (211)
T ss_pred hhccCcceEEeCcHHhcCCccccCc------------------------------------------------------e
Confidence 3444699999999999998654221 0
Q ss_pred cCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCC
Q psy7590 235 FTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVE 274 (358)
Q Consensus 235 ~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~ 274 (358)
+.+|+.+.....+++ +|...|.|-+++-.++++....
T Consensus 168 rlggD~ll~n~~G~S---rIS~aDYAiA~lDe~E~~~h~r 204 (211)
T COG2910 168 RLGGDQLLVNAKGES---RISYADYAIAVLDELEKPQHIR 204 (211)
T ss_pred EeccceEEEcCCCce---eeeHHHHHHHHHHHHhcccccc
Confidence 112555555444544 5889999999999999876543
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1e-11 Score=114.51 Aligned_cols=154 Identities=13% Similarity=0.118 Sum_probs=110.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~----~~d 61 (358)
.+++|||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD 87 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPD 87 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCc
Confidence 357999999999999999999999984 1000 113456689999999998887642 589
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHH----HHhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDT----SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++||+|+..... ..+.++....+++|+.+...+.++ .++.+..++|++||...+.. .
T Consensus 88 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~----------------~ 151 (263)
T PRK08339 88 IFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP----------------I 151 (263)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC----------------C
Confidence 999999864321 112234556788887765555544 44555568999999865421 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+..+.+. |+++..+.|+.+-.+
T Consensus 152 ~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 152 PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence 222269999999998888887654 799999999887543
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.5e-12 Score=133.50 Aligned_cols=152 Identities=17% Similarity=0.144 Sum_probs=108.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.++||||||+|+||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. +
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~ 493 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGG 493 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999873 100 0012335689999999999888753 6
Q ss_pred CcEEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHH----HhcC-CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 60 PTHVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTS----YKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa----~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
+|+|||+|+....... ........+++|+.+...+..++ ++.+ -.++|++||...+...
T Consensus 494 iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~------------- 560 (676)
T TIGR02632 494 VDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG------------- 560 (676)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-------------
Confidence 9999999997432111 11233556788888876665444 3444 2489999997432111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
+....|+.+|...+.+++.++.. .|+.+..+.|+.|+
T Consensus 561 ---~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 561 ---KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 11237999999999999988775 37999999999886
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.2e-12 Score=119.71 Aligned_cols=155 Identities=12% Similarity=0.069 Sum_probs=111.2
Q ss_pred CCCC--CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------c-----------eeeecccccCCCHHHHHHH
Q psy7590 1 MAEE--KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------W-----------IFVSSKEADLSNLESTQQL 54 (358)
Q Consensus 1 m~~~--~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------~-----------~~~~~~~~Dl~~~~~~~~~ 54 (358)
||.+ ++++||||+|+||.++++.|+++|++ .... . ..+..+.+|+++++++.++
T Consensus 1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~ 80 (273)
T PRK08278 1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAA 80 (273)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence 5543 68999999999999999999999973 1110 0 1234567999999999888
Q ss_pred Hhcc-----CCcEEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCC
Q psy7590 55 FSKY-----KPTHVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYP 122 (358)
Q Consensus 55 ~~~~-----~~d~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~ 122 (358)
++.. ++|+|||+|+....... ..++....+++|+.++.++++++... +-.++|++||......
T Consensus 81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~----- 155 (273)
T PRK08278 81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDP----- 155 (273)
T ss_pred HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccc-----
Confidence 7753 69999999997432111 12334667889999999999999743 2347888887532110
Q ss_pred CccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCc
Q psy7590 123 IDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCN 169 (358)
Q Consensus 123 ~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~ 169 (358)
. .. +....|+.+|...|.+++.++.+. ++.++.+.|+.
T Consensus 156 ---~-----~~-~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 156 ---K-----WF-APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred ---c-----cc-CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 0 00 222379999999999999887764 78999999974
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.1e-12 Score=118.31 Aligned_cols=154 Identities=16% Similarity=0.124 Sum_probs=115.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
.+++|||||+|.||.+++++|.++|++ .... ...+..+.+|++|.+++.+++++. ++|++
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~l 89 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDIL 89 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999999974 0000 112445689999999998888752 69999
Q ss_pred EEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 64 IHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 64 ih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
||+|+..... ....++....+++|+.++..+++++... + -.++|++||...+... +.
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------~~-- 154 (253)
T PRK08993 90 VNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG-------------IR-- 154 (253)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC-------------CC--
Confidence 9999974321 1123456778999999999998887643 2 2479999998765422 11
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...|.+.+.++.+ .|+.+..++|+.+-.+
T Consensus 155 -~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~ 194 (253)
T PRK08993 155 -VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194 (253)
T ss_pred -CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCc
Confidence 127999999999988888665 4899999999988654
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.9e-12 Score=119.99 Aligned_cols=154 Identities=17% Similarity=0.161 Sum_probs=111.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc----C-CCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR----D-DET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~----~-~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++++|||||+|.||+++++.|+++|++ . ... ...+..+.+|+++++++.++++.. ++|
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 84 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD 84 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence 3568999999999999999999999974 0 010 112456689999999988877642 589
Q ss_pred EEEEcccccCCccc----cccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGLFH----NMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~~~----~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+|+....... ..+.....+++|+.++..+.+++.. .+ .++|++||...+...
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------------- 148 (272)
T PRK08589 85 VLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD--------------- 148 (272)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC---------------
Confidence 99999997532111 1123355778898888766666543 34 589999998654321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+++.++.+. |+.+..+.|+.|..+
T Consensus 149 -~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 149 -LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 111279999999999999887653 799999999988655
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.9e-12 Score=114.32 Aligned_cols=157 Identities=18% Similarity=0.194 Sum_probs=113.0
Q ss_pred CCCCEEEEEcCCC-hhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc---
Q psy7590 2 AEEKIILVTGGTG-LVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 2 ~~~~~VlItGatG-~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
++.++++||||+| -||+++++.|+++|++ ... ....+..+.+|+++++++.++++..
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3457899999998 5999999999999974 110 0013456689999999988877642
Q ss_pred --CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccc
Q psy7590 59 --KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 59 --~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
++|+|||+|+...... ...+.....++.|+.++..+++++.. .+ -.++|++||...+.
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------ 162 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------ 162 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------
Confidence 6899999999643111 11233456788999999888888754 22 34788888764321
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+..+.. .|+.+|...+.+++.++.+ .|+++.+++|+.+..+.
T Consensus 163 ---~~~~~~-~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~ 207 (262)
T PRK07831 163 ---AQHGQA-HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF 207 (262)
T ss_pred ---CCCCCc-chHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence 111222 7999999999999988765 58999999999887764
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.5e-12 Score=115.57 Aligned_cols=153 Identities=16% Similarity=0.114 Sum_probs=104.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC-CC------------ceeeecccccCCCHHHHH----HHHhc----
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD-ET------------WIFVSSKEADLSNLESTQ----QLFSK---- 57 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~-~~------------~~~~~~~~~Dl~~~~~~~----~~~~~---- 57 (358)
+.++||||+|.||+++++.|+++|++ .. .. ...+..+.+|++|.+++. ++++.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 47999999999999999999999874 10 00 011234689999987553 33321
Q ss_pred -cCCcEEEEcccccCCccc---ccc-----------chhhHHHHHHHHHHHHHHHHHhcC----------CCEEEEeecc
Q psy7590 58 -YKPTHVIHLAAMVGGLFH---NMS-----------HNLDFFRVNMKINDNVLDTSYKQG----------VKKVVSCLST 112 (358)
Q Consensus 58 -~~~d~Vih~a~~~~~~~~---~~~-----------~~~~~~~~nv~~~~~ll~aa~~~~----------v~r~V~~SS~ 112 (358)
.++|+|||+||...+... ... .....+++|+.++..+++++.... ..++|++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 159999999996432111 111 134678999999999988765331 1257777765
Q ss_pred ceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 113 CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 113 ~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.... +..+.. .|+.+|...+.+++.++.+ .|+++++++|+.+..+
T Consensus 162 ~~~~---------------~~~~~~-~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 162 MTDQ---------------PLLGFT-MYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP 209 (267)
T ss_pred hccC---------------CCcccc-hhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence 3321 112222 7999999999999988666 5899999999988655
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=117.15 Aligned_cols=156 Identities=17% Similarity=0.124 Sum_probs=107.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------CC------------CCceeeecccccCC--CHHHHHHHHhc----
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------DD------------ETWIFVSSKEADLS--NLESTQQLFSK---- 57 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~------------~~~~~~~~~~~Dl~--~~~~~~~~~~~---- 57 (358)
.+.++|+||||+|+||.+++++|++.|++ .. .....+.++.+|++ +++++.++++.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 34579999999999999999999999873 10 00111233456665 56655554432
Q ss_pred -cCCcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccc
Q psy7590 58 -YKPTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 58 -~~~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
.++|+|||+|+..... ....+.....+++|+.++.++++++. +.+..+||++||.......
T Consensus 90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~---------- 159 (247)
T PRK08945 90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR---------- 159 (247)
T ss_pred hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC----------
Confidence 1589999999864321 11223456789999999888888774 4567899999997543211
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...|.+++.++... ++.+++++|+.+-.+
T Consensus 160 ------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 160 ------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred ------CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 111279999999999988876655 688889999877543
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.5e-11 Score=115.52 Aligned_cols=154 Identities=18% Similarity=0.149 Sum_probs=112.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhc-----cCCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSK-----YKPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~ 62 (358)
.++||||||+|.||.++++.|.+.|++ ... ....+..+.+|++|++++.++++. .++|+
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 88 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV 88 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 368999999999999999999999974 000 011222345999999999887764 26899
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
|||+|+...... .+.+.....+++|+.++.++++++... ...++|++||...+... |.
T Consensus 89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~ 152 (296)
T PRK05872 89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA----------------PG 152 (296)
T ss_pred EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC----------------CC
Confidence 999999743211 112234567899999999999988642 22489999998665321 12
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...+.+.+.++.+ .|+.+.++.|+.+..+
T Consensus 153 ~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~ 192 (296)
T PRK05872 153 MAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTD 192 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccch
Confidence 227999999999998877643 4899999999887654
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.3e-12 Score=117.46 Aligned_cols=157 Identities=15% Similarity=0.109 Sum_probs=110.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------ceeeecccccCCCHHHHHHHHhc---cCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------WIFVSSKEADLSNLESTQQLFSK---YKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~Vih~a~ 68 (358)
|++|+||||+|.+|+++++.|+++|++ .... ...+....+|++|++++.++++. .++|+|||+|+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 468999999999999999999999973 1111 11244567899999988877764 26999999998
Q ss_pred ccCCc-----cccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 69 MVGGL-----FHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 69 ~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
..... .....+....+.+|+.++..+++++... +..+++++||.. +.... + +..+.. .|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~-~---------~~~~~~-~Y 147 (225)
T PRK08177 81 ISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVEL-P---------DGGEMP-LY 147 (225)
T ss_pred ccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccccc-C---------CCCCcc-ch
Confidence 75321 1122344567788999999888888643 234788887752 22100 0 111112 69
Q ss_pred HHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 141 SHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+.+|...+.+++.++.+ .++.+..++|+.+-.+
T Consensus 148 ~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 148 KASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 99999999999988765 3689999999977544
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.7e-12 Score=114.98 Aligned_cols=155 Identities=14% Similarity=0.169 Sum_probs=108.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++++||||+|.||.++++.|.++|++ .... ...+..+.+|+++.+++.++++.. ++
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 86 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTL 86 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999974 1100 112345689999999988877642 58
Q ss_pred cEEEEcccccCCccc---cccchhhHHHHHHHHHHHH----HHHHHhcCC-CEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNV----LDTSYKQGV-KKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~l----l~aa~~~~v-~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|++||+|+....... ..+.....+++|+.++..+ ++.+.+.+. .++|++||...+.
T Consensus 87 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~---------------- 150 (261)
T PRK08936 87 DVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI---------------- 150 (261)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC----------------
Confidence 999999997542111 1133445788998777554 444455543 5899999964321
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+.|....|+.+|...+.+.+.++... |+++++++|+.+..+.
T Consensus 151 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 195 (261)
T PRK08936 151 PWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence 11222279999988877777665543 8999999999887764
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.6e-11 Score=111.14 Aligned_cols=151 Identities=16% Similarity=0.108 Sum_probs=110.7
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhc-----cCCcEE
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSK-----YKPTHV 63 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~V 63 (358)
|+||||+|+||.++++.|.++|++ ... ....+..+.+|+++++++.++++. .+.|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999999999973 110 012355678999999998887764 157999
Q ss_pred EEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH-----hcCCCEEEEeeccc-eecCCCCCCCccccccCCCCC
Q psy7590 64 IHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY-----KQGVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 64 ih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~-----~~~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~~ 134 (358)
||+++..... ....++....++.|+.++.++++++. +.+..++|++||.. .++..
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------------- 144 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR---------------- 144 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC----------------
Confidence 9999864321 12334567789999999999988763 23445899999974 43321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
....|+.+|...+.+.+.++.+ .|++++.++|+.+..+.
T Consensus 145 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (239)
T TIGR01831 145 -GQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM 186 (239)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence 1126999999888877776554 38999999999887654
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.1e-12 Score=118.32 Aligned_cols=154 Identities=16% Similarity=0.110 Sum_probs=113.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC---------CceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE---------TWIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~---------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
.+++|||||+|.||++++++|.++|++ ... ....+..+.+|+++++++.++++.. ++|++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~l 87 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDIL 87 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 368999999999999999999999984 100 0112445689999999999888642 58999
Q ss_pred EEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 64 IHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 64 ih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
||+|+..... ....++....+++|+.++..+.+++.. .+ -.++|++||...+... +.
T Consensus 88 v~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------------~~-- 152 (251)
T PRK12481 88 INNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-------------IR-- 152 (251)
T ss_pred EECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC-------------CC--
Confidence 9999974321 112344567889999998888887754 22 2489999998665322 11
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...+.+.+.++.+ .|+++..+.|+.+-.+
T Consensus 153 -~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~ 192 (251)
T PRK12481 153 -VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATD 192 (251)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccC
Confidence 126999999999999887764 4899999999887544
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.7e-12 Score=117.20 Aligned_cols=154 Identities=20% Similarity=0.154 Sum_probs=111.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--------CceeeecccccCCCHHHHHHHHhc-----cCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------TWIFVSSKEADLSNLESTQQLFSK-----YKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vi 64 (358)
.++++||||+|.||+++++.|+++|++ ... ....+..+.+|+.+.+++.++++. .++|++|
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 84 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLI 84 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 468999999999999999999999984 110 011244568999999988877764 2689999
Q ss_pred EcccccCC--cccc--c----cchhhHHHHHHHHHHHHHHHHHhcC---CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 65 HLAAMVGG--LFHN--M----SHNLDFFRVNMKINDNVLDTSYKQG---VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 65 h~a~~~~~--~~~~--~----~~~~~~~~~nv~~~~~ll~aa~~~~---v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|+.... .... . +.....+++|+.++..+++++...- -.++|++||...+.. .
T Consensus 85 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~---------------~ 149 (262)
T TIGR03325 85 PNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP---------------N 149 (262)
T ss_pred ECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC---------------C
Confidence 99986421 0001 1 1234688999999999999987531 136888888754321 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhcC--ceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQHG--VTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~g--~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+++.++.+.+ +.+..+.|+.+..+
T Consensus 150 -~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 150 -GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSD 190 (262)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCC
Confidence 1112699999999999999888753 88999999988655
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.7e-11 Score=114.33 Aligned_cols=149 Identities=15% Similarity=0.100 Sum_probs=108.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-CC-----------ceeeecccccCCCHHHHHHHHhc----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-ET-----------WIFVSSKEADLSNLESTQQLFSK----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-~~-----------~~~~~~~~~Dl~~~~~~~~~~~~----~~~d 61 (358)
.++++||||+|.||++++++|+++|.+ .. .. ...+..+.+|+++++++.++++. .++|
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD 91 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLD 91 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCC
Confidence 478999999999999999999999873 11 00 11344668999999998887764 2589
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc--------C---CCEEEEeeccceecCCCCCCCcccc
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ--------G---VKKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~--------~---v~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
+|||+|+...... ...++....+++|+.++..+++++... + ..++|++||...+...
T Consensus 92 ~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 162 (306)
T PRK07792 92 IVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP--------- 162 (306)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC---------
Confidence 9999999754211 122345668899999999999887521 0 1389999987543211
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecC
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPC 168 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~ 168 (358)
+ ....|+.+|...+.+.+.++.. +|+.+..+.|+
T Consensus 163 ----~---~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg 199 (306)
T PRK07792 163 ----V---GQANYGAAKAGITALTLSAARALGRYGVRANAICPR 199 (306)
T ss_pred ----C---CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC
Confidence 1 1126999999999998887764 58888888885
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.9e-12 Score=115.68 Aligned_cols=153 Identities=18% Similarity=0.173 Sum_probs=111.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
|+++||||+|.||+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 68999999999999999999999974 1100 023446689999999998877642 5899
Q ss_pred EEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|||+++..... ..+.+.....+++|+.++.++++++.. .+ -.++|++||...+...
T Consensus 82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------------- 145 (252)
T PRK07677 82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG---------------- 145 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC----------------
Confidence 99999853210 112233466899999999999999953 22 2489999987432111
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh----cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+..+.. +|+++..++|+.+...
T Consensus 146 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 146 PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 11126999999999888876554 4899999999988743
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.8e-11 Score=109.36 Aligned_cols=156 Identities=15% Similarity=0.123 Sum_probs=106.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc--------CC-C--CceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR--------DD-E--TWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMVGG 72 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~--------~~-~--~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~~~ 72 (358)
|+|+||||+|.||++++++|++++.. .. . ....+.++.+|+++++++.++.+.. ++|+|||+||....
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~~~ 80 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGMLHT 80 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccccc
Confidence 48999999999999999999998531 11 1 1123455789999999888766543 58999999997642
Q ss_pred cc----c-----cccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 73 LF----H-----NMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 73 ~~----~-----~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
.. . ..+.....+.+|+.++..+.+++.. .+..+++++||.. +.. .+. + .+....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~-----~~~-----~-~~~~~~ 147 (235)
T PRK09009 81 QDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSI-----SDN-----R-LGGWYS 147 (235)
T ss_pred cccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccc-----ccC-----C-CCCcch
Confidence 10 0 0112335678888888877777754 3345888888742 110 000 1 122227
Q ss_pred hHHHHHHHHHHHHHHHhh-----cCceEEEEecCcccCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQ-----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~-----~g~~~~ilRp~~v~G~ 173 (358)
|+.+|...+.+.+.++.+ .++.+..+.|+.+-.+
T Consensus 148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~ 186 (235)
T PRK09009 148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTA 186 (235)
T ss_pred hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecC
Confidence 999999999999888754 3688888889877544
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.7e-12 Score=115.79 Aligned_cols=154 Identities=19% Similarity=0.178 Sum_probs=110.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
|+++||||+|.||.++++.|.++|++ .... ...+..+.+|+++++++.++++.. ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 47999999999999999999999873 1100 011223579999999888777642 589
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----c-CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----Q-GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~-~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+++..... ....++....+++|+.++..+++++.. . ...++|++||...+..
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~---------------- 144 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA---------------- 144 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC----------------
Confidence 999999864321 112234467899999999999999753 2 2358999999754311
Q ss_pred CCCCcchHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+..+. ..++++++++|+.+.++.
T Consensus 145 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 145 LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 12222699999977776665553 358999999999998764
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.5e-12 Score=114.82 Aligned_cols=154 Identities=18% Similarity=0.137 Sum_probs=110.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.++++||||+|.||+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|++|
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 85 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFV 85 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 468999999999999999999999974 1100 012345689999999888877642 699999
Q ss_pred EcccccCC--cccc--ccc----hhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 65 HLAAMVGG--LFHN--MSH----NLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 65 h~a~~~~~--~~~~--~~~----~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|+.... .... .+. ....+++|+.++..+++++... .-.++|++||...+...
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------------- 150 (263)
T PRK06200 86 GNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG--------------- 150 (263)
T ss_pred ECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC---------------
Confidence 99997431 1001 111 3456788999988888887643 12479999998655321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~ 173 (358)
.+.. .|+.+|...+.+++.++... ++.+..+.|+.+..+
T Consensus 151 ~~~~-~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~ 191 (263)
T PRK06200 151 GGGP-LYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTD 191 (263)
T ss_pred CCCc-hhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence 1112 69999999999999887764 489999999888554
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.9e-12 Score=113.00 Aligned_cols=155 Identities=15% Similarity=0.179 Sum_probs=111.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.++|+||||+|++|+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|.
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 84 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDG 84 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999999999999999999999973 1110 013456689999999998877642 4799
Q ss_pred EEEcccccCC-ccccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccce-ecCCCCCCCccccccCCCCCCCCc
Q psy7590 63 VIHLAAMVGG-LFHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCI-FPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 63 Vih~a~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~v-y~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+||+++.... .....+.....++.|+.+...+++.+... .-.++|++||... ++. . +...
T Consensus 85 ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------------~-~~~~ 148 (238)
T PRK05786 85 LVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA---------------S-PDQL 148 (238)
T ss_pred EEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC---------------C-CCch
Confidence 9999985321 11111334556788988888777777653 1247999998743 211 1 1122
Q ss_pred chHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.|+.+|...+.+++.++... |++++++||++++++.
T Consensus 149 ~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~ 187 (238)
T PRK05786 149 SYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF 187 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence 69999999998888877653 8999999999999874
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.4e-11 Score=110.53 Aligned_cols=154 Identities=19% Similarity=0.157 Sum_probs=110.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi 64 (358)
.++|+||||+|.+|.++++.|+++|++ ... ....+..+.+|+++++++.++++.. ++|++|
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv 86 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILV 86 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEEE
Confidence 468999999999999999999999873 100 0112445689999999999988764 599999
Q ss_pred EcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+++..... ....++....+++|+.+...+.+++. +.+..++|++||..... +. +..
T Consensus 87 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~---------------~~-~~~ 150 (259)
T PRK06125 87 NNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN---------------PD-ADY 150 (259)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC---------------CC-CCc
Confidence 999864311 11223345678899999888888763 33345799998864321 11 112
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...+.+.+..+.. .|+++..+.|+.+..+
T Consensus 151 ~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 151 ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence 26899999999988887653 4899999999877644
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.7e-11 Score=112.60 Aligned_cols=153 Identities=17% Similarity=0.092 Sum_probs=104.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhc-----cCCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSK-----YKPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~V 63 (358)
|+||||||+|.||++++++|+++|++ .... ...+..+.+|++|++++.++++. .++|+|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 48999999999999999999999984 1100 01244568999999999888764 269999
Q ss_pred EEcccccCCcc--cc---ccchhhHHHHHHHHHHHHH----HHHH-hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 64 IHLAAMVGGLF--HN---MSHNLDFFRVNMKINDNVL----DTSY-KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 64 ih~a~~~~~~~--~~---~~~~~~~~~~nv~~~~~ll----~aa~-~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
||+|+...... .. .++....+.+|+.++..+. .... +.+-.++|++||...+.. .
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~---------------~ 145 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP---------------M 145 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC---------------C
Confidence 99999642100 11 1122334566766654443 3332 233458999999865421 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++..+ |+.+..+.|+.+-.+
T Consensus 146 -~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 146 -PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 122279999999999999887764 789999999876544
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=125.14 Aligned_cols=155 Identities=16% Similarity=0.195 Sum_probs=115.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhc-----cCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSK-----YKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vi 64 (358)
.+++|||||+|.||.++++.|.++|++ .... ...+..+.+|++|++++.++++. .++|++|
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 348 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLV 348 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999999973 1000 01223458999999999888764 2589999
Q ss_pred EcccccCC--c--cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 65 HLAAMVGG--L--FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 65 h~a~~~~~--~--~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
|+|+.... . ..+.+.....+++|+.++..+++++... +-.++|++||...+... |...
T Consensus 349 ~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~ 412 (520)
T PRK06484 349 NNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL----------------PPRN 412 (520)
T ss_pred ECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC----------------CCCc
Confidence 99997521 1 1122345678999999999999988764 23589999998654211 1122
Q ss_pred chHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.|+.+|...+.+++.++.+. |+++.++.|+.+..+.
T Consensus 413 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 451 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA 451 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence 79999999999998887654 7999999999887653
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.38 E-value=1e-11 Score=106.08 Aligned_cols=149 Identities=17% Similarity=0.127 Sum_probs=110.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------CCCC--------------ceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------DDET--------------WIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
++++||||+|.+|.+++++|.++|.. .... ...+..+.+|+++++++.+++...
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 47999999999999999999988752 1111 113345689999999888877642
Q ss_pred CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccce-ecCCCCCCCccccccCCCCC
Q psy7590 59 KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCI-FPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~v-y~~~~~~~~~E~~~~~~~~~ 134 (358)
.+|+|||+++..... ....++....++.|+.++.++++++...+.+++|++||... ++..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~---------------- 144 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP---------------- 144 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC----------------
Confidence 479999999964321 12224456789999999999999998888889999998743 3321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCccc
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVF 171 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~ 171 (358)
....|+.+|...+.+++.. +..+++++.+.|+.+-
T Consensus 145 -~~~~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 145 -GQANYAAANAFLDALAAHR-RARGLPATSINWGAWA 179 (180)
T ss_pred -CchhhHHHHHHHHHHHHHH-HhcCCceEEEeecccc
Confidence 1127999999999999655 4568999999887653
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.4e-11 Score=104.60 Aligned_cols=153 Identities=16% Similarity=0.148 Sum_probs=111.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc---------------CCCCceeeecccccCCCHHHHHHHHhc----c-CCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR---------------DDETWIFVSSKEADLSNLESTQQLFSK----Y-KPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~---------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~-~~d~V 63 (358)
.|.|+|||||+-+|.++++.|.+.|+. .......+.....|++|++++.++++. + ++|++
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiL 85 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDIL 85 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEE
Confidence 356999999999999999999999983 111101234457899999987666653 3 59999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||.||.+.... ...++...++++|+.|..+...+.. +++..++|.+||.+-- .+.|.
T Consensus 86 vNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~----------------~~y~~ 149 (246)
T COG4221 86 VNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGR----------------YPYPG 149 (246)
T ss_pred EecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccccc----------------ccCCC
Confidence 99999765322 2334567899999999888777764 4445589999998521 22233
Q ss_pred CcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFG 172 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G 172 (358)
...|+.+|+....+.....++. +++++.+-|+.+-.
T Consensus 150 ~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~ 188 (246)
T COG4221 150 GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVET 188 (246)
T ss_pred CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecc
Confidence 3379999999888877776654 79999999987743
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.3e-11 Score=110.95 Aligned_cols=153 Identities=16% Similarity=0.084 Sum_probs=107.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
++++||||+|.||+++++.|+++|++ ...+ ...+..+.+|++|++++.++++.. ++
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 88 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGV 88 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 58999999999999999999999974 1110 113445689999999988877542 58
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|++||+|+...... ...+.....+++|+.+...+++++ ++.+..++|++||...+..
T Consensus 89 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 152 (265)
T PRK07062 89 DMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQP---------------- 152 (265)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCC----------------
Confidence 99999999643111 112234556778877766665554 4444568999999865321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+.+..+.+ .|+.++.+.|+.+-.+
T Consensus 153 ~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 153 EPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 112227999999888887766554 4899999999887554
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=2e-11 Score=111.28 Aligned_cols=156 Identities=20% Similarity=0.213 Sum_probs=114.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------------------CCCCceeeecccccCCCHHHHHHHHhc-----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------------------DDETWIFVSSKEADLSNLESTQQLFSK----- 57 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~----- 57 (358)
||++++++|||||+-||..+++.|.++|+. .......+.++.+|+++++++..+...
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 455679999999999999999999999983 111223456779999999988887653
Q ss_pred cCCcEEEEcccccCC---ccccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 58 YKPTHVIHLAAMVGG---LFHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
..+|++||+||+... ...++++...++++|+.++..|-.+.. +++..++|.++|...|
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~--------------- 147 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL--------------- 147 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhc---------------
Confidence 369999999998442 223455667899999998877776664 4455689999999765
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHH---hhcCceEEEEecCcccC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYY---QQHGVTYTSVIPCNVFG 172 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~---~~~g~~~~ilRp~~v~G 172 (358)
.+.|....|+.||...-.+-+... +..|+.++.+-|+.+.-
T Consensus 148 -~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T 191 (265)
T COG0300 148 -IPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRT 191 (265)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccc
Confidence 333444589999986654444433 33589999999976553
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.6e-11 Score=127.57 Aligned_cols=155 Identities=17% Similarity=0.157 Sum_probs=115.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+.|+++||||+|.||.++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 3468999999999999999999999973 1100 113455689999999998888742 59
Q ss_pred cEEEEcccccCCc--ccc---ccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGGL--FHN---MSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~~--~~~---~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+..... ... .++....+++|+.++.+++.++ ++.+..++|++||.+.+...
T Consensus 450 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 516 (657)
T PRK07201 450 DYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNA------------- 516 (657)
T ss_pred CEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-------------
Confidence 9999999964210 011 1345678899999988876665 44566799999999876432
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++.. .|+.+++++|+.+..+
T Consensus 517 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~ 558 (657)
T PRK07201 517 ---PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTP 558 (657)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccc
Confidence 11227999999999999887665 3899999999988755
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.2e-11 Score=108.77 Aligned_cols=154 Identities=21% Similarity=0.196 Sum_probs=109.4
Q ss_pred CCEEEEEcCCC--hhHHHHHHHHHHccccC-------CCC---------------------ceeeecccccCCCHHHHHH
Q psy7590 4 EKIILVTGGTG--LVGKAIEKIVKEEEKRD-------DET---------------------WIFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 4 ~~~VlItGatG--~lG~~l~~~L~~~g~~~-------~~~---------------------~~~~~~~~~Dl~~~~~~~~ 53 (358)
.++||||||+| -||.+++++|+++|.+- ..+ ...+..+.+|+++.+++.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~ 85 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKE 85 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 46899999995 79999999999998630 000 0123456899999999988
Q ss_pred HHhcc-----CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCC
Q psy7590 54 LFSKY-----KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTY 121 (358)
Q Consensus 54 ~~~~~-----~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~ 121 (358)
++... ++|+|||+|+...... .+.+.....+++|+.+...+..++. +.+-.++|++||.....
T Consensus 86 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~----- 160 (256)
T PRK12859 86 LLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG----- 160 (256)
T ss_pred HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC-----
Confidence 88642 4899999998643211 1122345578999999888865443 33345899999975431
Q ss_pred CCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 122 PIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 122 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+..+.. .|+.+|...+.+.+.++.. .|+.++.++|+.+-.+
T Consensus 161 ----------~~~~~~-~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 161 ----------PMVGEL-AYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG 204 (256)
T ss_pred ----------CCCCch-HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence 111222 7999999999998888765 4899999999877544
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.7e-12 Score=127.58 Aligned_cols=154 Identities=16% Similarity=0.148 Sum_probs=113.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.+++|||||+|+||++++++|.++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 394 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPD 394 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCc
Confidence 468999999999999999999999984 100 0113456689999999998888652 589
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+||..... ....++....+++|+.++.++.+++.. .+ -.++|++||.+.|...
T Consensus 395 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------------- 459 (582)
T PRK05855 395 IVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS--------------- 459 (582)
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC---------------
Confidence 999999975321 112234566788999999998887643 33 2489999999876532
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+.. .|+.+|...+.+.+.++.+ .|++++++.|+.|-.+
T Consensus 460 ~~~~-~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 460 RSLP-AYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred CCCc-HHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 1122 7999999998888777654 4899999999877543
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.8e-11 Score=108.36 Aligned_cols=156 Identities=14% Similarity=0.001 Sum_probs=112.0
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHHHcccc------CC--------CCceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 2 AEEKIILVTGGT--GLVGKAIEKIVKEEEKR------DD--------ETWIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 2 ~~~~~VlItGat--G~lG~~l~~~L~~~g~~------~~--------~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
++.|+++||||+ +-||..++++|+++|++ .. .....+..+.+|+++++++.++++. .++
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 335689999999 79999999999999974 10 0011234568999999998887654 258
Q ss_pred cEEEEcccccCC------c-cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGG------L-FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~------~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+.... . ....++....+++|+.++..+.+++...- -.++|++||.....
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~--------------- 149 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER--------------- 149 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc---------------
Confidence 999999996431 0 11223445678899999888888776531 24799999864321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|....|+.+|...+.+.+.++.+ .|+.+..|.|+.|-.+
T Consensus 150 -~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~ 193 (252)
T PRK06079 150 -AIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTL 193 (252)
T ss_pred -cCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccc
Confidence 1122237999999999999888775 4899999999988654
|
|
| >KOG3019|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=2e-11 Score=106.36 Aligned_cols=203 Identities=14% Similarity=0.154 Sum_probs=139.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy7590 81 LDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH 158 (358)
Q Consensus 81 ~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~ 158 (358)
.+.....+..+..|.+++.++. .+.+|.+|..++|-.+....++|++ +.+... .....-..-|....... .
T Consensus 98 kev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~----~~qgfd-~~srL~l~WE~aA~~~~--~ 170 (315)
T KOG3019|consen 98 KEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKI----VHQGFD-ILSRLCLEWEGAALKAN--K 170 (315)
T ss_pred HHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccccccc----ccCChH-HHHHHHHHHHHHhhccC--c
Confidence 3344445667889999999886 5689999999999988888899997 444433 23333333344433322 2
Q ss_pred CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCC
Q psy7590 159 GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGG 238 (358)
Q Consensus 159 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (358)
.++.+++|.+.|.|.+... +.. |++++..+-|
T Consensus 171 ~~r~~~iR~GvVlG~gGGa-----------~~~-------------------------------------M~lpF~~g~G 202 (315)
T KOG3019|consen 171 DVRVALIRIGVVLGKGGGA-----------LAM-------------------------------------MILPFQMGAG 202 (315)
T ss_pred ceeEEEEEEeEEEecCCcc-----------hhh-------------------------------------hhhhhhhccC
Confidence 4899999999999997542 211 3344444447
Q ss_pred ceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceee---------cC
Q psy7590 239 DEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITF---------DT 309 (358)
Q Consensus 239 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~---------~~ 309 (358)
.|+ +++.+.++|||++|++..+..+++++.-. + ++|-..+++++..|+++.+.++++.+.-+.. .+
T Consensus 203 GPl---GsG~Q~fpWIHv~DL~~li~~ale~~~v~-G-ViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~ 277 (315)
T KOG3019|consen 203 GPL---GSGQQWFPWIHVDDLVNLIYEALENPSVK-G-VINGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGP 277 (315)
T ss_pred CcC---CCCCeeeeeeehHHHHHHHHHHHhcCCCC-c-eecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCc
Confidence 674 78999999999999999999999985443 3 8998899999999999999999997753321 11
Q ss_pred CCCCC-ccccccchHHHHhhhCCCCcc--ccHHHHHHHHH
Q psy7590 310 NAADG-QLKKTASNRKLRELRGPGFEF--TPFQQAVQESV 346 (358)
Q Consensus 310 ~~~~~-~~~~~~~~~k~~~~l~~G~~~--~~~~~~l~~~~ 346 (358)
.+... ..-...-..|+.+. ||++ ..+.+++++.+
T Consensus 278 erA~~vLeGqKV~Pqral~~---Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 278 ERATVVLEGQKVLPQRALEL---GFEFKYPYVKDALRAIM 314 (315)
T ss_pred cceeEEeeCCcccchhHhhc---CceeechHHHHHHHHHh
Confidence 11100 00112234555554 9984 37899988764
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.6e-11 Score=109.15 Aligned_cols=146 Identities=13% Similarity=0.115 Sum_probs=108.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------CCCC------ceeeecccccCCCHHHHHHHHhcc--CCcEEEEcccccC
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------DDET------WIFVSSKEADLSNLESTQQLFSKY--KPTHVIHLAAMVG 71 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vih~a~~~~ 71 (358)
|++||||+|.+|+++++.|.++|++ ...+ ...+..+.+|+++++++.++++.. ++|++||+++...
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~ 81 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSW 81 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCccc
Confidence 7999999999999999999999974 1110 112345689999999999888642 5899999987421
Q ss_pred ----C----ccccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 72 ----G----LFHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 72 ----~----~~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
+ .....++....+++|+.++..+++++... .-.++|++||... +. ...|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~-----------------~~---~~~Y~ 141 (223)
T PRK05884 82 DAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP-----------------PA---GSAEA 141 (223)
T ss_pred cCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC-----------------CC---ccccH
Confidence 0 00122345678999999999999998653 1248999998640 11 12799
Q ss_pred HHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 142 HAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
.+|...+.+.+.++.+ .|+.+..+.|+.+.
T Consensus 142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~ 174 (223)
T PRK05884 142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSV 174 (223)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccC
Confidence 9999999999888775 47999999998774
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-10 Score=109.34 Aligned_cols=149 Identities=17% Similarity=0.170 Sum_probs=107.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC---------CC-----------ceeeecccccCCCHHHHHHHHhc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD---------ET-----------WIFVSSKEADLSNLESTQQLFSK 57 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~---------~~-----------~~~~~~~~~Dl~~~~~~~~~~~~ 57 (358)
.+++|||||++.||.++++.|.+.|.+ .. .. ...+..+.+|++|++++.++++.
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 85 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDA 85 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH
Confidence 468999999999999999999999873 11 00 01233567899999988877754
Q ss_pred -----cCCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----c---C---CCEEEEeeccceecCCC
Q psy7590 58 -----YKPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----Q---G---VKKVVSCLSTCIFPDKT 119 (358)
Q Consensus 58 -----~~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~---~---v~r~V~~SS~~vy~~~~ 119 (358)
.++|++||+|+..... ....+.....+++|+.++..+.+++.. . + -.++|++||...+..
T Consensus 86 ~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-- 163 (286)
T PRK07791 86 AVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG-- 163 (286)
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC--
Confidence 2689999999974321 112234567899999999888877752 1 1 138999999754321
Q ss_pred CCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecC
Q psy7590 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPC 168 (358)
Q Consensus 120 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~ 168 (358)
.+....|+.+|...+.+.+..+.+ .|+.+..|.|+
T Consensus 164 --------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg 201 (286)
T PRK07791 164 --------------SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA 201 (286)
T ss_pred --------------CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence 112227999999999888887665 48999999997
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.7e-10 Score=112.32 Aligned_cols=130 Identities=17% Similarity=0.150 Sum_probs=90.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc--------eeeecccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW--------IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
++|+|+||||+|.||++++++|.++|++ ...+. ..+..+.+|++|++++.+.+. ++|++||+||
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~--~IDiLInnAG 254 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLE--KVDILIINHG 254 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhC--CCCEEEECCC
Confidence 3578999999999999999999999874 11110 113356789999999999887 5999999998
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhc----C---CC-EEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ----G---VK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~---v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
.......+.++....+++|+.++.++++++... + .+ .+|.+|+... .+ +....|
T Consensus 255 i~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-----------------~~-~~~~~Y 316 (406)
T PRK07424 255 INVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-----------------NP-AFSPLY 316 (406)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-----------------cC-CCchHH
Confidence 653222233455678999999999999997542 2 12 2444443221 11 112269
Q ss_pred HHHHHHHHHHHH
Q psy7590 141 SHAKRMLDVLNK 152 (358)
Q Consensus 141 ~~sK~~~E~~~~ 152 (358)
+.||...+.+..
T Consensus 317 ~ASKaAl~~l~~ 328 (406)
T PRK07424 317 ELSKRALGDLVT 328 (406)
T ss_pred HHHHHHHHHHHH
Confidence 999999988753
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.29 E-value=1e-10 Score=110.75 Aligned_cols=167 Identities=13% Similarity=0.019 Sum_probs=111.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc-cc------CCC-----------CceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE-KR------DDE-----------TWIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g-~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
++++||||++-||.++++.|+++| ++ ... ....+..+.+|+++.+++.++++. .++|
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD 83 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLD 83 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 589999999999999999999999 73 100 012344568999999998877754 2599
Q ss_pred EEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHH----hcC--CCEEEEeeccceecCCC----CCCCcccc
Q psy7590 62 HVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSY----KQG--VKKVVSCLSTCIFPDKT----TYPIDETM 127 (358)
Q Consensus 62 ~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~--v~r~V~~SS~~vy~~~~----~~~~~E~~ 127 (358)
++||+||...+. ..+.+.....+++|+.++..+..++. +.+ ..++|++||...+.... ..+.+..+
T Consensus 84 ~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~ 163 (314)
T TIGR01289 84 ALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGD 163 (314)
T ss_pred EEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccc
Confidence 999999974321 11223445678999999877766554 332 35899999997653210 00111000
Q ss_pred c--------------cCCCCCCCCcchHHHHHHHHHHHHHHHhh----cCceEEEEecCcccC
Q psy7590 128 V--------------HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFG 172 (358)
Q Consensus 128 ~--------------~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G 172 (358)
. ...+..+.. .|+.||+....+.+.++++ .|+.++.+.||.|..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 225 (314)
T TIGR01289 164 LSGLAAGFKAPIAMIDGKEFKGAK-AYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIAD 225 (314)
T ss_pred cccccccCCCcccccCCCCcchhh-hHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccC
Confidence 0 000112223 7999999988888777664 379999999998853
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-10 Score=110.50 Aligned_cols=155 Identities=15% Similarity=0.171 Sum_probs=107.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCC--HHHHHHH---HhccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSN--LESTQQL---FSKYK 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~--~~~~~~~---~~~~~ 59 (358)
.+.++||||||.||++++++|.++|++ ...+ ...+..+.+|+++ .+.+.++ +...+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 368999999999999999999999973 1000 1123445678874 3433333 33334
Q ss_pred CcEEEEcccccCCc-----cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 60 PTHVIHLAAMVGGL-----FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 60 ~d~Vih~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
+|++||+||..... ..+.++....+++|+.++..+.+++.. .+..++|++||...+..
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~------------- 199 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVI------------- 199 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC-------------
Confidence 67999999975311 112233456899999999998888753 45568999999865421
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFG 172 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G 172 (358)
+..|....|+.||...+.+.+.++.+. |++++++.|+.+-.
T Consensus 200 -~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T 243 (320)
T PLN02780 200 -PSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVAT 243 (320)
T ss_pred -CCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceec
Confidence 111222379999999999988887654 89999999987753
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.2e-09 Score=99.96 Aligned_cols=148 Identities=17% Similarity=0.127 Sum_probs=97.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-CCc-----eeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-ETW-----IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
.++++||||+|.||+++++.|+++|++ .. ... .....+.+|+++.+++.+.+. ++|++||+||...
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~iDilVnnAG~~~ 91 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLA--SLDVLILNHGINP 91 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcC--CCCEEEECCccCC
Confidence 468999999999999999999999874 11 000 011345789999999988876 5999999999743
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhc-------CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHH
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQ-------GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~-------~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
....+.++....+++|+.++..+++++... +-..++..||.+.+. ++ ... .|+.||
T Consensus 92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~---------------~~-~~~-~Y~aSK 154 (245)
T PRK12367 92 GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQ---------------PA-LSP-SYEISK 154 (245)
T ss_pred cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccC---------------CC-CCc-hhHHHH
Confidence 222234566788999999999999987652 112243344432211 11 112 699999
Q ss_pred HHHHHHH---HHHH---hhcCceEEEEecCcc
Q psy7590 145 RMLDVLN---KAYY---QQHGVTYTSVIPCNV 170 (358)
Q Consensus 145 ~~~E~~~---~~~~---~~~g~~~~ilRp~~v 170 (358)
...+.+. ++.. ...++.+..+.|+.+
T Consensus 155 aal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~ 186 (245)
T PRK12367 155 RLIGQLVSLKKNLLDKNERKKLIIRKLILGPF 186 (245)
T ss_pred HHHHHHHHHHHHHHHhhcccccEEEEecCCCc
Confidence 9875433 2221 134677777776543
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.7e-10 Score=105.87 Aligned_cols=151 Identities=20% Similarity=0.239 Sum_probs=106.1
Q ss_pred EEEEEcCCChhHHHHHHHHHH----cccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc----
Q psy7590 6 IILVTGGTGLVGKAIEKIVKE----EEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~----~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
.|+||||+|.||.+++++|.+ .|++ ... ....+..+.+|+++++++.++++..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999999999999999997 5652 100 1123556789999999888777532
Q ss_pred -----CCcEEEEcccccCCc---cc---cccchhhHHHHHHHHHHHHHHHHHhc-----C-CCEEEEeeccceecCCCCC
Q psy7590 59 -----KPTHVIHLAAMVGGL---FH---NMSHNLDFFRVNMKINDNVLDTSYKQ-----G-VKKVVSCLSTCIFPDKTTY 121 (358)
Q Consensus 59 -----~~d~Vih~a~~~~~~---~~---~~~~~~~~~~~nv~~~~~ll~aa~~~-----~-v~r~V~~SS~~vy~~~~~~ 121 (358)
+.|+|||+|+..... .. ..++....+++|+.++..+.+++... + ..++|++||...+..
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~---- 157 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP---- 157 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC----
Confidence 136999999964311 01 11234568999999987777666442 2 247999999854321
Q ss_pred CCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 122 PIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 122 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
.|....|+.+|...+.+.+.++.+ .|+.++.+.|+.+-.
T Consensus 158 ------------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T 199 (256)
T TIGR01500 158 ------------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDT 199 (256)
T ss_pred ------------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccc
Confidence 122237999999999999887665 378999999987753
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=3e-11 Score=101.47 Aligned_cols=149 Identities=20% Similarity=0.206 Sum_probs=113.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccc---------c---CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEK---------R---DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~---------~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
|+||.++|+||||..|+.+++++++.+. | .+.....+..+..|....+++.+.+. ++|+.|-+-+.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~q~~vDf~Kl~~~a~~~q--g~dV~FcaLgT 93 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVAQVEVDFSKLSQLATNEQ--GPDVLFCALGT 93 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceeeeEEechHHHHHHHhhhc--CCceEEEeecc
Confidence 5678999999999999999999999875 1 22233344555788877788877777 69999987665
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
.. .....+-++++.-+-...+.++|++.||++|+.+||.++-. . ++..|.+.|-..|+
T Consensus 94 TR----gkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~-----------------s-SrFlY~k~KGEvE~ 151 (238)
T KOG4039|consen 94 TR----GKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP-----------------S-SRFLYMKMKGEVER 151 (238)
T ss_pred cc----cccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc-----------------c-cceeeeeccchhhh
Confidence 43 22335556777777777899999999999999999986521 1 23489999999998
Q ss_pred HHHHHHhhcCc-eEEEEecCcccCCCCCCC
Q psy7590 150 LNKAYYQQHGV-TYTSVIPCNVFGPHDNYN 178 (358)
Q Consensus 150 ~~~~~~~~~g~-~~~ilRp~~v~G~~~~~~ 178 (358)
-+.+. ++ .++|+||+.+.|......
T Consensus 152 ~v~eL----~F~~~~i~RPG~ll~~R~esr 177 (238)
T KOG4039|consen 152 DVIEL----DFKHIIILRPGPLLGERTESR 177 (238)
T ss_pred hhhhc----cccEEEEecCcceeccccccc
Confidence 88664 43 599999999999876543
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.9e-10 Score=105.40 Aligned_cols=157 Identities=11% Similarity=0.033 Sum_probs=111.5
Q ss_pred CCCCCEEEEEcCCC--hhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhc-----
Q psy7590 1 MAEEKIILVTGGTG--LVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSK----- 57 (358)
Q Consensus 1 m~~~~~VlItGatG--~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~----- 57 (358)
||+.+.+|||||++ -||.++++.|.++|++ ... .......+.+|++|++++.++++.
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 34456899999996 8999999999999974 100 000012457999999999888754
Q ss_pred cCCcEEEEcccccCC-----c--cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccc
Q psy7590 58 YKPTHVIHLAAMVGG-----L--FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~-----~--~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
.++|++||+|+.... . ....++....+++|+.++..+++++... .-.++|++||.+...
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~------------ 151 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR------------ 151 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc------------
Confidence 269999999996431 0 1122344567889999998888777542 114799999874321
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|....|+.+|...+.+.+..+.+ .|+.+..|.|+.+-.+
T Consensus 152 ----~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 152 ----VMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL 195 (271)
T ss_pred ----cCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence 1122227999999999988888776 3799999999988654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-10 Score=115.65 Aligned_cols=152 Identities=17% Similarity=0.189 Sum_probs=110.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----CC-CC---------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----DD-ET---------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----~~-~~---------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.+++|||||+|.||.++++.|.++|.+ .. .. ......+.+|+++++++.++++.. ++|+||
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi 289 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVV 289 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 468999999999999999999999874 10 00 011234578999999888877642 589999
Q ss_pred EcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcCC----CEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQGV----KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v----~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+|+..... ....+.....+++|+.++.++.+++..... .+||++||...+... +..
T Consensus 290 ~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~----------------~~~ 353 (450)
T PRK08261 290 HNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN----------------RGQ 353 (450)
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC----------------CCC
Confidence 999975311 012234566889999999999999977432 589999998543211 111
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
..|+.+|...+.+++.++.+ .|+.+..+.|+.+-
T Consensus 354 ~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~ 390 (450)
T PRK08261 354 TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIE 390 (450)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCc
Confidence 26999999877777766554 48999999998763
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.4e-10 Score=107.23 Aligned_cols=155 Identities=23% Similarity=0.127 Sum_probs=95.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------C------CCC----ceeeecccccCCCHHH-HHHHHhcc--CCc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------D------DET----WIFVSSKEADLSNLES-TQQLFSKY--KPT 61 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~------~~~----~~~~~~~~~Dl~~~~~-~~~~~~~~--~~d 61 (358)
|+++++|||+||||.+|+-+++.|+++|+. + ... ......+..|...+.+ +..+.+.. ...
T Consensus 76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~ 155 (411)
T KOG1203|consen 76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV 155 (411)
T ss_pred CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence 567789999999999999999999999983 1 001 1111222344333333 33333322 133
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
+++-+++-.+. .++...-.++.-.|++|+++||+.+|++|||++||.+.=-. .... +..-....+-
T Consensus 156 ~v~~~~ggrp~----~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~------~~~~----~~~~~~~~~~ 221 (411)
T KOG1203|consen 156 IVIKGAGGRPE----EEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKF------NQPP----NILLLNGLVL 221 (411)
T ss_pred eEEecccCCCC----cccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCccc------CCCc----hhhhhhhhhh
Confidence 45545443321 11223334566789999999999999999999988754111 1110 0000012455
Q ss_pred HHHHHHHHHHHHHHhhcCceEEEEecCcccCC
Q psy7590 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~ 173 (358)
.+|.++|+++. .+|++++|||++...-.
T Consensus 222 ~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~ 249 (411)
T KOG1203|consen 222 KAKLKAEKFLQ----DSGLPYTIIRPGGLEQD 249 (411)
T ss_pred HHHHhHHHHHH----hcCCCcEEEeccccccC
Confidence 78888888774 58999999999866543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.4e-09 Score=98.59 Aligned_cols=152 Identities=13% Similarity=0.014 Sum_probs=108.4
Q ss_pred CEEEEEcC--CChhHHHHHHHHHHccccC---------CCC-------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 5 KIILVTGG--TGLVGKAIEKIVKEEEKRD---------DET-------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 5 ~~VlItGa--tG~lG~~l~~~L~~~g~~~---------~~~-------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
++++|||| ++-||.++++.|+++|++- ... ......+.+|++|++++.++++. .++|
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 86 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGLD 86 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCCc
Confidence 67999996 6799999999999999740 000 00112457999999999888864 2699
Q ss_pred EEEEcccccCCc--------cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 62 HVIHLAAMVGGL--------FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 62 ~Vih~a~~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
++||+|+..... ..+.++....+++|+.++..+.+++... +-.++|++||.....
T Consensus 87 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~--------------- 151 (260)
T PRK06997 87 GLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER--------------- 151 (260)
T ss_pred EEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc---------------
Confidence 999999975310 0112334567889999998888887653 124799999875321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
+.|....|+.+|...+.+.+.++.+ .|+.+..+.|+.+-.
T Consensus 152 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T 194 (260)
T PRK06997 152 -VVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKT 194 (260)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCcccc
Confidence 1122226999999999999888765 479999999987754
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.2e-10 Score=102.54 Aligned_cols=154 Identities=13% Similarity=0.041 Sum_probs=105.8
Q ss_pred CCEEEEEcC--CChhHHHHHHHHHHcccc------CC----------CCceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 4 EKIILVTGG--TGLVGKAIEKIVKEEEKR------DD----------ETWIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 4 ~~~VlItGa--tG~lG~~l~~~L~~~g~~------~~----------~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
.++++|||| ++-||.++++.|.++|++ .. ........+.+|++|++++.++++. .++
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 85 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL 85 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 358999997 679999999999999973 00 0001122468999999999888754 269
Q ss_pred cEEEEcccccCCc-----c---ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 61 THVIHLAAMVGGL-----F---HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 61 d~Vih~a~~~~~~-----~---~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
|++||+||..... . ...+.....+++|+.+...+.+++... +-.++|++||...+.
T Consensus 86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~------------- 152 (261)
T PRK08690 86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR------------- 152 (261)
T ss_pred cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc-------------
Confidence 9999999975320 0 011223445778888887777665432 124799998875431
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+.|....|+.+|...+.+.+..+.+ .|+.+..+.|+.+--+
T Consensus 153 ---~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~ 196 (261)
T PRK08690 153 ---AIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTL 196 (261)
T ss_pred ---CCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccch
Confidence 1122237999999999888877553 4899999999887543
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.1e-09 Score=100.72 Aligned_cols=154 Identities=9% Similarity=-0.047 Sum_probs=109.4
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++++||||+ +-||.++++.|+++|++ .... ......+.+|++|++++.++++.. ++
T Consensus 10 ~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~l 89 (258)
T PRK07533 10 GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGRL 89 (258)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCCC
Confidence 3689999998 48999999999999974 1100 011234679999999998877542 58
Q ss_pred cEEEEcccccCCc-------cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGGL-------FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+..... ..+.++....+++|+.++..+.+++...- -.++|++||.....
T Consensus 90 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~--------------- 154 (258)
T PRK07533 90 DFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK--------------- 154 (258)
T ss_pred CEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc---------------
Confidence 9999999864310 11223456788999999999988876531 13789988864321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|....|+.+|...+.+.+..+.+ .|+.+..+.|+.+-.+
T Consensus 155 -~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~ 198 (258)
T PRK07533 155 -VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTR 198 (258)
T ss_pred -CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCCh
Confidence 1122227999999999888887665 4799999999877543
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.1e-10 Score=103.59 Aligned_cols=157 Identities=13% Similarity=0.050 Sum_probs=111.8
Q ss_pred CCC--CCEEEEEcCC--ChhHHHHHHHHHHcccc------CCC--C-----------ceeeecccccCCCHHHHHHHHhc
Q psy7590 1 MAE--EKIILVTGGT--GLVGKAIEKIVKEEEKR------DDE--T-----------WIFVSSKEADLSNLESTQQLFSK 57 (358)
Q Consensus 1 m~~--~~~VlItGat--G~lG~~l~~~L~~~g~~------~~~--~-----------~~~~~~~~~Dl~~~~~~~~~~~~ 57 (358)
|++ .++++||||+ +-||++++++|.++|++ ... + ...+..+.+|++|++++.++++.
T Consensus 1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 80 (258)
T PRK07370 1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFET 80 (258)
T ss_pred CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHH
Confidence 554 3579999986 79999999999999873 100 0 01123567999999999888764
Q ss_pred c-----CCcEEEEcccccCC-----cc--ccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCC
Q psy7590 58 Y-----KPTHVIHLAAMVGG-----LF--HNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPI 123 (358)
Q Consensus 58 ~-----~~d~Vih~a~~~~~-----~~--~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~ 123 (358)
. ++|++||+|+.... .. .+.+.....+++|+.++..+.+++... .-.++|++||.....
T Consensus 81 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~------- 153 (258)
T PRK07370 81 IKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR------- 153 (258)
T ss_pred HHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc-------
Confidence 2 69999999996421 11 122334668889999988888876542 124899999874321
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 124 DETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 124 ~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+.|....|+.+|...+.+.+.++.+. |+.+..+.|+.+-.+
T Consensus 154 ---------~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 154 ---------AIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred ---------CCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence 11222279999999999998887654 799999999988554
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=5e-10 Score=104.00 Aligned_cols=163 Identities=24% Similarity=0.217 Sum_probs=108.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc----cCCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK----YKPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~----~~~d~V 63 (358)
+.++|||| |.||+++++.|. +|++ .... ...+..+.+|++|++++.++++. .++|++
T Consensus 3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 36899997 689999999996 6763 1100 11244568999999999888864 259999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCC-CC-------CCCccccccCCC-
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDK-TT-------YPIDETMVHNGP- 132 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~-~~-------~~~~E~~~~~~~- 132 (358)
||+|+... ...+....+++|+.++.++++++... .-.+.|++||....... .. ...+..+....+
T Consensus 81 i~nAG~~~----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (275)
T PRK06940 81 VHTAGVSP----SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPF 156 (275)
T ss_pred EECCCcCC----chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccc
Confidence 99999753 23567789999999999999988754 11245667776432111 00 001111000000
Q ss_pred --C---CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 --P---HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 --~---~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+ .+....|+.||...+.+.+.++.+ .|+.+..+.||.+..+
T Consensus 157 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~ 205 (275)
T PRK06940 157 LQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTP 205 (275)
T ss_pred ccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCc
Confidence 0 011227999999999988877664 3799999999988665
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.9e-10 Score=102.50 Aligned_cols=153 Identities=12% Similarity=-0.036 Sum_probs=107.7
Q ss_pred CEEEEEcCC--ChhHHHHHHHHHHcccc------CC---C---------CceeeecccccCCCHHHHHHHHhc-----cC
Q psy7590 5 KIILVTGGT--GLVGKAIEKIVKEEEKR------DD---E---------TWIFVSSKEADLSNLESTQQLFSK-----YK 59 (358)
Q Consensus 5 ~~VlItGat--G~lG~~l~~~L~~~g~~------~~---~---------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~ 59 (358)
++++||||+ +-||.+++++|.++|++ .. . ....+..+.+|++|++++.++++. .+
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 87 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVGV 87 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCC
Confidence 579999997 89999999999999974 10 0 011234568999999998887753 25
Q ss_pred CcEEEEcccccCC-----c--cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccC
Q psy7590 60 PTHVIHLAAMVGG-----L--FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 60 ~d~Vih~a~~~~~-----~--~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
+|++||+|+.... . ..+.+.....+++|+.+...+.+++...- -.++|++||....-
T Consensus 88 ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-------------- 153 (257)
T PRK08594 88 IHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER-------------- 153 (257)
T ss_pred ccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc--------------
Confidence 8999999986421 0 01112234567888888887777766431 24899999874321
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+.|....|+.+|...+.+.+.++.+ .|+.+..|.|+.+-.+
T Consensus 154 --~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 154 --VVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence 1122227999999999999888765 3799999999877544
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.4e-09 Score=98.60 Aligned_cols=154 Identities=14% Similarity=0.039 Sum_probs=108.7
Q ss_pred CCEEEEEcCCC--hhHHHHHHHHHHcccc------CC---C-------CceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 4 EKIILVTGGTG--LVGKAIEKIVKEEEKR------DD---E-------TWIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 4 ~~~VlItGatG--~lG~~l~~~L~~~g~~------~~---~-------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
.+.++||||++ -||.++++.|.++|++ .. . .......+.+|++|++++.++++. .++
T Consensus 8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (260)
T PRK06603 8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF 87 (260)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 36799999996 7999999999999974 10 0 000112357999999999888754 259
Q ss_pred cEEEEcccccCC------c-cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGG------L-FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~------~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+.... . ..+.++....+++|+.+...+++++...- -.++|++||.....
T Consensus 88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~--------------- 152 (260)
T PRK06603 88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK--------------- 152 (260)
T ss_pred cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc---------------
Confidence 999999986421 0 11233456688999999998888765321 13899999874321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|....|+.+|...+.+.+.++.+ .|+.+..+.|+.+-.+
T Consensus 153 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 196 (260)
T PRK06603 153 -VIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL 196 (260)
T ss_pred -CCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence 1122227999999999988888765 4799999999887543
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.4e-10 Score=101.85 Aligned_cols=155 Identities=14% Similarity=0.026 Sum_probs=108.1
Q ss_pred CCCCEEEEEcCCC--hhHHHHHHHHHHcccc------CC---C-------CceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 2 AEEKIILVTGGTG--LVGKAIEKIVKEEEKR------DD---E-------TWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 2 ~~~~~VlItGatG--~lG~~l~~~L~~~g~~------~~---~-------~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
|+.++++||||++ -||+++++.|.++|++ .. . ....+..+.+|++|++++.++++..
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 3446899999985 8999999999999974 10 0 0011234679999999998887541
Q ss_pred CCcEEEEcccccCCcc--------ccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccc
Q psy7590 59 KPTHVIHLAAMVGGLF--------HNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
++|++||+|+...... ...+.....+++|+.+...+.+++... .-.++|++||.+..
T Consensus 84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~------------- 150 (262)
T PRK07984 84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------- 150 (262)
T ss_pred CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCC-------------
Confidence 5899999999643110 112233456788998888787776532 11479999887432
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
.+.|....|+.+|...+.+.+..+.+ .|+.+..+-|+.+--
T Consensus 151 ---~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T 194 (262)
T PRK07984 151 ---RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT 194 (262)
T ss_pred ---CCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccc
Confidence 11122237999999999999988775 379999999987753
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.18 E-value=6.3e-10 Score=112.50 Aligned_cols=154 Identities=18% Similarity=0.194 Sum_probs=113.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhc-----cCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSK-----YKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vi 64 (358)
.+++|||||++.||.++++.|.++|++ .... ...+..+.+|+++++++.++++. .++|++|
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li 84 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVLV 84 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 357999999999999999999999973 1111 01233468999999999888765 2599999
Q ss_pred EcccccCC-----ccccccchhhHHHHHHHHHHHHHHHHHhc----CCC-EEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 65 HLAAMVGG-----LFHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 65 h~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|+|+...+ .....++....+++|+.++..+++++... +-. ++|++||.......
T Consensus 85 ~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~---------------- 148 (520)
T PRK06484 85 NNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL---------------- 148 (520)
T ss_pred ECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC----------------
Confidence 99986321 11223445678999999999999888754 333 89999998543211
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++.+ .+++++.+.|+.+-.+
T Consensus 149 ~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 149 PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence 11227999999999998887665 3799999999987554
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.2e-10 Score=102.46 Aligned_cols=153 Identities=12% Similarity=0.030 Sum_probs=110.7
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHcccc------CC---CC-------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKR------DD---ET-------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~------~~---~~-------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.+++|||||+ +-||.++++.|.++|++ .. .. ......+.+|++|++++.++++.. ++
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 89 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL 89 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999997 79999999999999984 10 00 011234689999999998887642 58
Q ss_pred cEEEEcccccCC-----c--cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGG-----L--FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~-----~--~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+.... . ..+.++....+++|+.++..+++++...- -.++|++||.+..
T Consensus 90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~---------------- 153 (272)
T PRK08159 90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE---------------- 153 (272)
T ss_pred cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc----------------
Confidence 999999997531 0 11223456788999999999998877531 2489999886432
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
.+.|....|+.+|...+.+.+..+.+ .|+.+.++.|+.+..
T Consensus 154 ~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T 197 (272)
T PRK08159 154 KVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKT 197 (272)
T ss_pred cCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCC
Confidence 11122237999999999998888765 379999999987754
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.2e-10 Score=104.29 Aligned_cols=165 Identities=16% Similarity=0.085 Sum_probs=107.0
Q ss_pred EEEcCCChhHHHHHHHHHHcc-cc------CCC-----------CceeeecccccCCCHHHHHHHHhc-----cCCcEEE
Q psy7590 8 LVTGGTGLVGKAIEKIVKEEE-KR------DDE-----------TWIFVSSKEADLSNLESTQQLFSK-----YKPTHVI 64 (358)
Q Consensus 8 lItGatG~lG~~l~~~L~~~g-~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vi 64 (358)
+||||++-||.+++++|+++| ++ ... ....+..+.+|++|.+++.++++. .++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 63 100 011344568999999998887753 2589999
Q ss_pred EcccccCCc----cccccchhhHHHHHHHHHHHHHHHHH----hcC--CCEEEEeeccceecCCC--C-CC---C-----
Q psy7590 65 HLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSY----KQG--VKKVVSCLSTCIFPDKT--T-YP---I----- 123 (358)
Q Consensus 65 h~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~--v~r~V~~SS~~vy~~~~--~-~~---~----- 123 (358)
|+|+...+. ..+.+.....+++|+.++..+.+++. +.+ ..++|++||...+-... . .+ .
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~ 160 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG 160 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence 999974321 11223446789999999777755544 333 35899999985542100 0 00 0
Q ss_pred -----cccc---ccCCCCCCCCcchHHHHHHHHHHHHHHHhh----cCceEEEEecCcccC
Q psy7590 124 -----DETM---VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFG 172 (358)
Q Consensus 124 -----~E~~---~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G 172 (358)
++.. +......+....|+.||+..+...+.++++ .|+.++.+.||.|..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~ 221 (308)
T PLN00015 161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIAT 221 (308)
T ss_pred hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccC
Confidence 0000 000001112237999999977776766664 379999999999854
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-09 Score=100.24 Aligned_cols=156 Identities=15% Similarity=0.056 Sum_probs=108.8
Q ss_pred CCC---CCEEEEEcC--CChhHHHHHHHHHHcccc------CC-CC-c--------eeeecccccCCCHHHHHHHHhc--
Q psy7590 1 MAE---EKIILVTGG--TGLVGKAIEKIVKEEEKR------DD-ET-W--------IFVSSKEADLSNLESTQQLFSK-- 57 (358)
Q Consensus 1 m~~---~~~VlItGa--tG~lG~~l~~~L~~~g~~------~~-~~-~--------~~~~~~~~Dl~~~~~~~~~~~~-- 57 (358)
||+ .++++|||| ++-||.++++.|+++|++ .. .. . ..+..+.+|++|++++.++++.
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence 555 358999999 899999999999999974 11 01 0 0234568999999998887754
Q ss_pred ---cCCcEEEEcccccCC-----c--cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCcc
Q psy7590 58 ---YKPTHVIHLAAMVGG-----L--FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDE 125 (358)
Q Consensus 58 ---~~~d~Vih~a~~~~~-----~--~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E 125 (358)
.++|++||+|+.... . ..++++....+++|+.++..+.+++... .-.++|++|+...
T Consensus 81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~----------- 149 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT----------- 149 (256)
T ss_pred HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc-----------
Confidence 269999999997521 0 0112233456899999988888877643 1237888875422
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 126 TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 126 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|....|+.+|...+.+.+..+.+ .|+.+..+.|+.+-.+
T Consensus 150 ------~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 194 (256)
T PRK07889 150 ------VAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTL 194 (256)
T ss_pred ------ccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccCh
Confidence 11122226899999999888887665 4799999999887544
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-09 Score=100.91 Aligned_cols=154 Identities=13% Similarity=-0.029 Sum_probs=109.6
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHcccc------CC---CCc-------eeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKR------DD---ETW-------IFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~------~~---~~~-------~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
.|.++||||+ +-||.++++.|.++|++ .. ... .....+.+|++|++++.++++. .++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~i 84 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGKI 84 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999997 78999999999999974 10 000 0002457999999998887754 268
Q ss_pred cEEEEcccccCC-----c--cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGG-----L--FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~-----~--~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+.... . ....+.....+++|+.++..+.+++...= -.++|++||.+...
T Consensus 85 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~--------------- 149 (274)
T PRK08415 85 DFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVK--------------- 149 (274)
T ss_pred CEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCcc---------------
Confidence 999999996421 0 11223346689999999988888776531 14899999864321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+.|....|+.+|...+.+.+.++.+ .|+.+..+-|+.+..+
T Consensus 150 -~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 150 -YVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL 193 (274)
T ss_pred -CCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 1122227999999999998888765 4799999999887543
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.7e-09 Score=92.25 Aligned_cols=137 Identities=22% Similarity=0.196 Sum_probs=104.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-c------C-------------CCCceeeecccccCCCHHHHHHHHhc-----cC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-R------D-------------DETWIFVSSKEADLSNLESTQQLFSK-----YK 59 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-~------~-------------~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~ 59 (358)
|+|+||||+|-||..+++.|+++|. + . ......+.+..+|+++++++.++++. ..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999999999954 1 1 00124556678999999999888765 26
Q ss_pred CcEEEEcccccCCcccc---ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 60 PTHVIHLAAMVGGLFHN---MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
+|++||+++........ .+.....+++|+.+...+.+++...+-.++|++||....- +.|.
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------~~~~ 144 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVR----------------GSPG 144 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTS----------------SSTT
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhcc----------------CCCC
Confidence 99999999986521111 2344578999999999999999986566899999986532 2233
Q ss_pred CcchHHHHHHHHHHHHHHHhh
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ 157 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~ 157 (358)
...|+.+|...+.+.+.++++
T Consensus 145 ~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 145 MSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp BHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHh
Confidence 348999999999999888765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-09 Score=100.78 Aligned_cols=153 Identities=16% Similarity=0.106 Sum_probs=104.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC----------CCc-----------eeeecccccCCCHHHHHHHHhc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD----------ETW-----------IFVSSKEADLSNLESTQQLFSK 57 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~----------~~~-----------~~~~~~~~Dl~~~~~~~~~~~~ 57 (358)
|+++||||++-||.++++.|++.|++ .. ... ..+..+.+|+++++++.++++.
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 88 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVER 88 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 68999999999999999999999974 11 010 1133568999999999888764
Q ss_pred c-----CCcEEEEcc-cccC-----Ccc--ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccce-ecCCC
Q psy7590 58 Y-----KPTHVIHLA-AMVG-----GLF--HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCI-FPDKT 119 (358)
Q Consensus 58 ~-----~~d~Vih~a-~~~~-----~~~--~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~v-y~~~~ 119 (358)
. ++|++||+| +... ... ...+.....+++|+.++..+..++.. .+-.++|++||... +...
T Consensus 89 ~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~- 167 (305)
T PRK08303 89 IDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT- 167 (305)
T ss_pred HHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc-
Confidence 2 689999999 6320 101 11123345678888888777776654 22348999998633 2110
Q ss_pred CCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCccc
Q psy7590 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVF 171 (358)
Q Consensus 120 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~ 171 (358)
..+....|+.+|.....+.+.++.+. |+.+..|.|+.+-
T Consensus 168 -------------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~ 209 (305)
T PRK08303 168 -------------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLR 209 (305)
T ss_pred -------------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccc
Confidence 11112269999999999888776654 7899999997663
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.1e-09 Score=96.97 Aligned_cols=152 Identities=18% Similarity=0.207 Sum_probs=102.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
|+++||||++-||.+++++|. +|++ ... ....+..+.+|++|++++.++++. .++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 479999999999999999998 4763 100 001244568999999998887654 2699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHH----HHhcC-CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDT----SYKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a----a~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+|+...... ...........+|+.+...++.+ ..+.+ -.++|++||...+-.
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~---------------- 143 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA---------------- 143 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC----------------
Confidence 9999999753211 11112234566777776655444 33332 348999999754311
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+.+.++.+ .|+.++.+-|+.+..+
T Consensus 144 ~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~ 186 (246)
T PRK05599 144 RRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS 186 (246)
T ss_pred CcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence 112227999999999888887665 3788999999877543
|
|
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.4e-09 Score=95.27 Aligned_cols=214 Identities=20% Similarity=0.216 Sum_probs=141.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------C-----CCCce-eeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------D-----DETWI-FVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~-----~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
++++.|+.||.|+++++...+.++. . ...|. .+.++.+|....+-+...+. ++..++.+++..
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~--g~t~v~e~~ggf--- 128 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLS--GPTFVYEMMGGF--- 128 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhc--CCcccHHHhcCc---
Confidence 5789999999999999999998873 1 11222 33445677666665666666 588888887654
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
.+...+.+.|-+...+-.++|.++|+++|+|+|... ||-. +..| + +|-.+|+.+|.-+..
T Consensus 129 ----gn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~~-------------~~i~-r-GY~~gKR~AE~Ell~ 188 (283)
T KOG4288|consen 129 ----GNIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGLP-------------PLIP-R-GYIEGKREAEAELLK 188 (283)
T ss_pred ----cchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCCC-------------Cccc-h-hhhccchHHHHHHHH
Confidence 567788899999999999999999999999999752 1111 3333 3 699999999977765
Q ss_pred HHhhcCceEEEEecCcccCCCCCCCCCcc-cchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESS-HVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 154 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
- ++..-+++|||.+||...-...... +.+..-++..++.+.+
T Consensus 189 ~---~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k---------------------------------- 231 (283)
T KOG4288|consen 189 K---FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALK---------------------------------- 231 (283)
T ss_pred h---cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhc----------------------------------
Confidence 3 4567899999999998532211110 1112223333332211
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHH
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIAN 297 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~ 297 (358)
+-..+++. +.-..+-+.++++|.+.+.+++.+.-. ..+++.+|.++..+
T Consensus 232 ----~~~kLp~l--g~l~~ppvnve~VA~aal~ai~dp~f~----------Gvv~i~eI~~~a~k 280 (283)
T KOG4288|consen 232 ----PLNKLPLL--GPLLAPPVNVESVALAALKAIEDPDFK----------GVVTIEEIKKAAHK 280 (283)
T ss_pred ----hhhcCccc--ccccCCCcCHHHHHHHHHHhccCCCcC----------ceeeHHHHHHHHHH
Confidence 01122222 223455689999999999988875432 24567777766543
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.3e-09 Score=97.56 Aligned_cols=138 Identities=17% Similarity=0.127 Sum_probs=102.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc---------------------CCCCceeeecccccCCCHHHHHHHHhc-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR---------------------DDETWIFVSSKEADLSNLESTQQLFSK----- 57 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~---------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~----- 57 (358)
.|.|+|||||+-||.+++.+|.+.|.. .... .+..+.+|++|.+++.++++.
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~--~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE--KVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC--ccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999972 1111 455568999999999988632
Q ss_pred cCCcEEEEcccccCCcccc---ccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 58 YKPTHVIHLAAMVGGLFHN---MSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
.++|++||.||........ ..+....+++|+.|+..+..++.. .+-.++|.+||..-+
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~--------------- 154 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK--------------- 154 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc---------------
Confidence 3799999999975422222 223345889999998888887754 343489999998543
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhcC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQHG 159 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g 159 (358)
.+-|....|..||.+.+.+.+.+.++..
T Consensus 155 -~~~P~~~~Y~ASK~Al~~f~etLR~El~ 182 (282)
T KOG1205|consen 155 -MPLPFRSIYSASKHALEGFFETLRQELI 182 (282)
T ss_pred -cCCCcccccchHHHHHHHHHHHHHHHhh
Confidence 2222222799999999999988877753
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=99.65 Aligned_cols=149 Identities=15% Similarity=0.143 Sum_probs=102.7
Q ss_pred HHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc--CCcEEEEcccccCCccccccchhhHHHHHHHHHH
Q psy7590 21 EKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY--KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKIND 92 (358)
Q Consensus 21 ~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~ 92 (358)
++.|+++|++ .........++.+|++|.+++.++++.. ++|+|||+||... ..+....+++|+.++.
T Consensus 2 a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~-----~~~~~~~~~vN~~~~~ 76 (241)
T PRK12428 2 ARLLRFLGARVIGVDRREPGMTLDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG-----TAPVELVARVNFLGLR 76 (241)
T ss_pred hHHHHhCCCEEEEEeCCcchhhhhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC-----CCCHHHhhhhchHHHH
Confidence 4566666653 1111112345689999999999988753 6999999999753 2456788999999999
Q ss_pred HHHHHHHhc--CCCEEEEeeccceecCCCCCCCccc----cccC-------CCCCCCCcchHHHHHHHHHHHHHHH----
Q psy7590 93 NVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDET----MVHN-------GPPHPSNFGYSHAKRMLDVLNKAYY---- 155 (358)
Q Consensus 93 ~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~----~~~~-------~~~~p~~~~Y~~sK~~~E~~~~~~~---- 155 (358)
.+++++... .-.++|++||...|+.....+..|. .... ..+.+....|+.+|...+.+.+.++
T Consensus 77 ~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~ 156 (241)
T PRK12428 77 HLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWF 156 (241)
T ss_pred HHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 999999764 2258999999988763321111111 0000 0122223379999999999888777
Q ss_pred hhcCceEEEEecCcccCCC
Q psy7590 156 QQHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 156 ~~~g~~~~ilRp~~v~G~~ 174 (358)
...|+.+.+++|+.+.++-
T Consensus 157 ~~~girvn~v~PG~v~T~~ 175 (241)
T PRK12428 157 GARGIRVNCVAPGPVFTPI 175 (241)
T ss_pred hccCeEEEEeecCCccCcc
Confidence 3458999999999998763
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.5e-08 Score=89.07 Aligned_cols=151 Identities=13% Similarity=0.094 Sum_probs=102.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----c-CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----Y-KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~-~~ 60 (358)
.++++||||++-||.++++.|.++|++ .... ...+..+.+|+.+++++.++++. . ++
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 84 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAP 84 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 368999999999999999999999984 1110 01233457899999999877753 2 59
Q ss_pred cEEEEcccccCCc-ccccc---chhhHHHHHHHHHHHHHHHH----HhcC-CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGGL-FHNMS---HNLDFFRVNMKINDNVLDTS----YKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~~-~~~~~---~~~~~~~~nv~~~~~ll~aa----~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+..... ..... .....+..|+.++..+..++ .+.+ -..+|++||...+
T Consensus 85 D~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---------------- 148 (227)
T PRK08862 85 DVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---------------- 148 (227)
T ss_pred CEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC----------------
Confidence 9999999743211 11111 22335566776666554443 3333 3489999985321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+ ....|+.+|...+.+.+..+.. .|+.+..+.|+.+-.+
T Consensus 149 ~---~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 149 Q---DLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred C---CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 1 1126999999999888887664 4899999999987655
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.1e-08 Score=91.32 Aligned_cols=154 Identities=23% Similarity=0.236 Sum_probs=109.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC---------c-----eeeecccccCCC-HHHHHHHHhc--
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET---------W-----IFVSSKEADLSN-LESTQQLFSK-- 57 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~---------~-----~~~~~~~~Dl~~-~~~~~~~~~~-- 57 (358)
|+++++||||||++-||..+++.|.++|+. .... . ..+.....|+++ .+++..+++.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 455679999999999999999999988873 1110 0 134445689998 8877766653
Q ss_pred ---cCCcEEEEcccccC---Cc-cccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCcccccc
Q psy7590 58 ---YKPTHVIHLAAMVG---GL-FHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 58 ---~~~d~Vih~a~~~~---~~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
.++|++||+|+... +. ....+.....+.+|+.+...+.+++...- -+++|.+||.... ..
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~----------- 149 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG----------- 149 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC-----------
Confidence 24899999999753 11 12224567789999999888888444322 1189999998653 21
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcc
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNV 170 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v 170 (358)
+.. .. .|+.||...+.+.+.++.+ .|+.+..+-|+.+
T Consensus 150 --~~~-~~-~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~ 189 (251)
T COG1028 150 --PPG-QA-AYAASKAALIGLTKALALELAPRGIRVNAVAPGYI 189 (251)
T ss_pred --CCC-cc-hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccC
Confidence 111 12 7999999999888888744 4899999999843
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.94 E-value=2e-08 Score=87.54 Aligned_cols=146 Identities=16% Similarity=0.188 Sum_probs=102.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc-------C---C-----------CCceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR-------D---D-----------ETWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~-------~---~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
++|||||+|-||..+++.|.+++.+ . . .....+.++.+|++|++++.++++.. +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 6899999999999999999999863 2 0 01235677889999999999998753 5
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc-eecCCCCCCCccccccCCCCCC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~~p 135 (358)
++.|||+|+...... .+.+.....+..-+.++.+|.++.....++.||.+||.+ ++|..
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~----------------- 144 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP----------------- 144 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T-----------------
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc-----------------
Confidence 788999999753211 122334567888899999999999998899999999994 55543
Q ss_pred CCcchHHHHHHHHHHHHHHHhhcCceEEEEecCc
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~ 169 (358)
....|+.+-...+.+.....+ .|.+++++.-+.
T Consensus 145 gq~~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~ 177 (181)
T PF08659_consen 145 GQSAYAAANAFLDALARQRRS-RGLPAVSINWGA 177 (181)
T ss_dssp TBHHHHHHHHHHHHHHHHHHH-TTSEEEEEEE-E
T ss_pred chHhHHHHHHHHHHHHHHHHh-CCCCEEEEEccc
Confidence 122799999999988877644 589988887653
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.4e-09 Score=98.23 Aligned_cols=163 Identities=14% Similarity=0.130 Sum_probs=112.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccCCCCceee---------------ecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV---------------SSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~---------------~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
+|+||+|+|++|.+|+.++..|...+......+..+ .....+.+|+.++.++++ ++|+||+++
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~--gaDvVVita 84 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALR--GADLVLICA 84 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhC--CCCEEEECC
Confidence 477999999999999999999986553110011100 111233445455567777 599999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCC--CCccccccCCCCCCCCcchHHHHH
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTY--PIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~--~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
|... ....+..+.+..|+..++++++++++++++++|+++|-.+-.-..-. .+.+.+ ...|.. .||.+-+
T Consensus 85 G~~~---~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~s----g~p~~~-viG~g~L 156 (321)
T PTZ00325 85 GVPR---KPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAG----VYDPRK-LFGVTTL 156 (321)
T ss_pred CCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhcc----CCChhh-eeechhH
Confidence 9854 12245678899999999999999999999999999997553211000 111222 334444 6888767
Q ss_pred HHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 146 MLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 146 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
..-++-...++..+++...++ +.|+|.+..
T Consensus 157 Ds~R~r~~la~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 157 DVVRARKFVAEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred HHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence 777777777888899888888 788888754
|
|
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=8.7e-08 Score=90.32 Aligned_cols=165 Identities=19% Similarity=0.095 Sum_probs=117.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------------------CCCCceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------------------DDETWIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
+.++|||||+-||.++++.|..+|.+ .......+.+..+|+++..++.+..+. .+.
T Consensus 36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~l 115 (314)
T KOG1208|consen 36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPL 115 (314)
T ss_pred cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCc
Confidence 57999999999999999999999973 222334445569999999999877654 368
Q ss_pred cEEEEcccccCCccc-cccchhhHHHHHHHHHHHHHHH----HHhcCCCEEEEeeccceecC--CCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLFH-NMSHNLDFFRVNMKINDNVLDT----SYKQGVKKVVSCLSTCIFPD--KTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~~-~~~~~~~~~~~nv~~~~~ll~a----a~~~~v~r~V~~SS~~vy~~--~~~~~~~E~~~~~~~~ 133 (358)
|+.|+.||++.+... ..+..+..+.+|..|+..|.+. ++.+...|+|++||..- +. +....-.|.. ..
T Consensus 116 dvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~----~~ 190 (314)
T KOG1208|consen 116 DVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKA----KL 190 (314)
T ss_pred cEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhc----cC
Confidence 999999998775432 2234677888898887666554 45554469999999854 21 1111111111 10
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~ 174 (358)
......|+.||........++.++. |+.+..+-||.+....
T Consensus 191 ~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 191 YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 1111159999999999999988876 6999999999888774
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.1e-07 Score=89.67 Aligned_cols=154 Identities=13% Similarity=-0.086 Sum_probs=104.4
Q ss_pred CCEEEEEcC--CChhHHHHHHHHHHccccCC--------------CC----------cee-----eecccccC--CC---
Q psy7590 4 EKIILVTGG--TGLVGKAIEKIVKEEEKRDD--------------ET----------WIF-----VSSKEADL--SN--- 47 (358)
Q Consensus 4 ~~~VlItGa--tG~lG~~l~~~L~~~g~~~~--------------~~----------~~~-----~~~~~~Dl--~~--- 47 (358)
.|.+||||| +.-||.++++.|.+.|.+-- .. ... ...+.+|+ .+
T Consensus 9 gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 88 (303)
T PLN02730 9 GKRAFIAGVADDNGYGWAIAKALAAAGAEILVGTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPED 88 (303)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCcccc
Confidence 468999999 79999999999999987310 00 000 12456677 32
Q ss_pred ---------------HHHHHHHHhc-----cCCcEEEEcccccC----Cc-cccccchhhHHHHHHHHHHHHHHHHHhcC
Q psy7590 48 ---------------LESTQQLFSK-----YKPTHVIHLAAMVG----GL-FHNMSHNLDFFRVNMKINDNVLDTSYKQG 102 (358)
Q Consensus 48 ---------------~~~~~~~~~~-----~~~d~Vih~a~~~~----~~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~ 102 (358)
++++.++++. -++|++||+|+... +. ..+.++....+++|+.+...+.+++...=
T Consensus 89 ~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m 168 (303)
T PLN02730 89 VPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIM 168 (303)
T ss_pred CchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 2355555543 25899999996421 11 12334567789999999998888876541
Q ss_pred --CCEEEEeeccceecCCCCCCCccccccCCCCCCCC-cchHHHHHHHHHHHHHHHhh----cCceEEEEecCcccCC
Q psy7590 103 --VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN-FGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 103 --v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~-~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~ 173 (358)
-.++|++||..... ..|.. ..|+.+|...+.+.+.++.+ .|+.+..|-||.+--+
T Consensus 169 ~~~G~II~isS~a~~~----------------~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~ 230 (303)
T PLN02730 169 NPGGASISLTYIASER----------------IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSR 230 (303)
T ss_pred hcCCEEEEEechhhcC----------------CCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCc
Confidence 14899999875421 11211 15999999999999888765 3689999999877544
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.6e-08 Score=87.77 Aligned_cols=154 Identities=18% Similarity=0.105 Sum_probs=106.5
Q ss_pred CCCCEEEEEcCC-ChhHHHHHHHHHHcccc------C-----CCC-ceeeecccccCCCHHHHHHHHhc------cCCcE
Q psy7590 2 AEEKIILVTGGT-GLVGKAIEKIVKEEEKR------D-----DET-WIFVSSKEADLSNLESTQQLFSK------YKPTH 62 (358)
Q Consensus 2 ~~~~~VlItGat-G~lG~~l~~~L~~~g~~------~-----~~~-~~~~~~~~~Dl~~~~~~~~~~~~------~~~d~ 62 (358)
.+.++|||||++ |-||.+|+++|.++|++ . ... ..++..++.|+++++++.+.... .+.|+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 345789999985 99999999999999984 1 111 22345568999999988776543 36899
Q ss_pred EEEccccc--CC-ccccccchhhHHHHHHHHHHHHHHHHHhcC---CCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 63 VIHLAAMV--GG-LFHNMSHNLDFFRVNMKINDNVLDTSYKQG---VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 63 Vih~a~~~--~~-~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~---v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
+++.||.. .+ .....+.-+..+++|+-|..++-++....= -..+|++.|..+|- +-|.
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v----------------pfpf 148 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV----------------PFPF 148 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe----------------ccch
Confidence 99999963 21 112334557789999988777766665321 12799999997663 3344
Q ss_pred CcchHHHHHHHHHHHHHHHh---hcCceEEEEecCccc
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVF 171 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~ 171 (358)
+..|..||+..-.+.+...- ..|++++.+.+|.|-
T Consensus 149 ~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~ 186 (289)
T KOG1209|consen 149 GSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVA 186 (289)
T ss_pred hhhhhHHHHHHHHhhhhcEEeeeccccEEEEeccccee
Confidence 45899999887665544322 237788888777654
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.9e-07 Score=85.65 Aligned_cols=150 Identities=18% Similarity=0.170 Sum_probs=103.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CC------CCc---eeeecccccCCCHHHHHHHHhc-----cCCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DD------ETW---IFVSSKEADLSNLESTQQLFSK-----YKPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~------~~~---~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~ 62 (358)
...||||||++-+|+.++.++.++|.. .. ... -.+..+.+|+++++++.+..+. ..+|+
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I 117 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDI 117 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence 458999999999999999999999873 00 000 1345678999999988766643 26999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccc-eecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+||.||.+.... .+.+.-+..+++|+.+.....++- .+.+-.++|-++|.. .++..
T Consensus 118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~---------------- 181 (300)
T KOG1201|consen 118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA---------------- 181 (300)
T ss_pred EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc----------------
Confidence 999999865321 222334568889998877655554 444445899999884 33221
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh------cCceEEEEecCcc
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ------HGVTYTSVIPCNV 170 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~------~g~~~~ilRp~~v 170 (358)
.-..|..||..+.-..+.+..+ .|++.+.+-|+.+
T Consensus 182 -gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i 222 (300)
T KOG1201|consen 182 -GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFI 222 (300)
T ss_pred -cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeec
Confidence 1127999999887766665433 2688888877544
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.8e-07 Score=84.87 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=107.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----------------C-CCCceeeecccccCCCHHHHHHHHhc-------cC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----------------D-DETWIFVSSKEADLSNLESTQQLFSK-------YK 59 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----------------~-~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~ 59 (358)
+-|||||+-.-.|+.|+++|.++|++ . ..+...+ ..|+++++++.++.+- .+
T Consensus 30 k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~---~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 30 KAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTL---QLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeE---eeccCCHHHHHHHHHHHHHhccccc
Confidence 45999999999999999999999974 1 3333334 8999999999887752 35
Q ss_pred CcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 60 PTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 60 ~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
--.|||+||..... +...++.....++|+.|+.++..+. +++. .|+|++||.+- .
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~G--R-------------- 169 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLG--R-------------- 169 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEeccccc--C--------------
Confidence 67899999954321 2234566788999998877666555 4443 39999999843 0
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPC 168 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~ 168 (358)
.+-|...+|..||...|.......++ +|++++++-||
T Consensus 170 ~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 170 VALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred ccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 22233338999999999888777654 59999999998
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.73 E-value=5e-08 Score=92.30 Aligned_cols=161 Identities=15% Similarity=0.110 Sum_probs=109.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCC------cee--ee-------cccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDET------WIF--VS-------SKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~------~~~--~~-------~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
.||+|+|++|.+|++++..|...+...... ... .+ ....++.+..++.++++ ++|+|||+|+.
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~--~aDiVVitAG~ 96 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALK--GADLVIIPAGV 96 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcC--CCCEEEEeCCC
Confidence 589999999999999999998766521000 110 00 11123334445667788 59999999998
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
... ......+....|...++++.+.+.+++++++|+++|--+-+.. ..++.-........|.. .||.+++..++
T Consensus 97 ~~~---~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~--~i~t~~~~~~s~~p~~~-viG~~~LDs~R 170 (323)
T PLN00106 97 PRK---PGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTV--PIAAEVLKKAGVYDPKK-LFGVTTLDVVR 170 (323)
T ss_pred CCC---CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccH--HHHHHHHHHcCCCCcce-EEEEecchHHH
Confidence 642 2345678899999999999999999999999998885321000 00110000111344444 79999999999
Q ss_pred HHHHHHhhcCceEEEEecCcccCCC
Q psy7590 150 LNKAYYQQHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 150 ~~~~~~~~~g~~~~ilRp~~v~G~~ 174 (358)
+-..++++.|++...+. +.|+|.+
T Consensus 171 l~~~lA~~lgv~~~~V~-~~ViGeH 194 (323)
T PLN00106 171 ANTFVAEKKGLDPADVD-VPVVGGH 194 (323)
T ss_pred HHHHHHHHhCCChhheE-EEEEEeC
Confidence 99999999999888875 4677766
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.6e-07 Score=79.16 Aligned_cols=170 Identities=16% Similarity=0.158 Sum_probs=110.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------------CCCCceeeecccccCCCHHHHHHHHh----cc-CCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------------DDETWIFVSSKEADLSNLESTQQLFS----KY-KPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------------~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~-~~d~Vih~ 66 (358)
-+||||||+.-||..|+++|.+.|.+ ....++.+....+|+.|.++..++.+ .+ ..+++|++
T Consensus 6 nTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNN 85 (245)
T COG3967 6 NTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLINN 85 (245)
T ss_pred cEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheeeec
Confidence 37999999999999999999999873 11223333334688888776555443 22 58999999
Q ss_pred ccccCCccc-----cccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 67 AAMVGGLFH-----NMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 67 a~~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
||++..... ...+..+-...|+.++..|..+... +.--.+|.+||.-.|-.. ...|
T Consensus 86 AGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm-------------~~~P-- 150 (245)
T COG3967 86 AGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM-------------ASTP-- 150 (245)
T ss_pred ccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc-------------cccc--
Confidence 998653211 1122355677888888777666543 333379999998655322 2233
Q ss_pred cchHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCCCCCCCCCcccchhHHHH
Q psy7590 138 FGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIR 190 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~ 190 (358)
.|..+|+..-.+-..... ..+++++-+-|+.|--+...........++.++.
T Consensus 151 -vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~~~nt~~~~km~ls~~~~ 205 (245)
T COG3967 151 -VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTTEGNTQARGKMPLSAFIS 205 (245)
T ss_pred -cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecCccccCccccCCcchhhH
Confidence 699999877655544443 3479999999999877633222333344444443
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.6e-07 Score=81.77 Aligned_cols=156 Identities=21% Similarity=0.136 Sum_probs=110.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C--------------CCCceeeecccccCCCHHHHHHHHh----c--
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D--------------DETWIFVSSKEADLSNLESTQQLFS----K-- 57 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~--------------~~~~~~~~~~~~Dl~~~~~~~~~~~----~-- 57 (358)
.|.++||||+.-||++++.+|.+.|.+ . ......+..+.+|+++.+...++++ +
T Consensus 8 gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~ 87 (270)
T KOG0725|consen 8 GKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFF 87 (270)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999973 1 0111123445899998877665553 2
Q ss_pred cCCcEEEEcccccCCc----cccccchhhHHHHHHHH-HHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccc
Q psy7590 58 YKPTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKI-NDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~-~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
.+.|++|+.|+..... ..+.+..+..+++|+.| ...+..++... +-..++++||..-+...
T Consensus 88 GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~---------- 157 (270)
T KOG0725|consen 88 GKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPG---------- 157 (270)
T ss_pred CCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCC----------
Confidence 2699999999975422 23344567789999994 66666555433 33468888887544322
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
...+ . .|+.+|...+.+.+..+.+. |+++.++-|+.|..+.
T Consensus 158 ---~~~~-~-~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 158 ---PGSG-V-AYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred ---CCCc-c-cchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 1111 2 69999999999998887654 8999999999888775
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.66 E-value=4.6e-07 Score=104.98 Aligned_cols=153 Identities=14% Similarity=0.077 Sum_probs=114.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc------CCC-------------------------------------------
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR------DDE------------------------------------------- 33 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~------~~~------------------------------------------- 33 (358)
.+.+|||||++-||..++++|.+++ .+ ...
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence 3589999999999999999999884 32 200
Q ss_pred ---------------CceeeecccccCCCHHHHHHHHhcc----CCcEEEEcccccCCc---cccccchhhHHHHHHHHH
Q psy7590 34 ---------------TWIFVSSKEADLSNLESTQQLFSKY----KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKIN 91 (358)
Q Consensus 34 ---------------~~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~ 91 (358)
....+.++.+|++|.+++.+++... ++|.|||+||..... ....++....+++|+.|+
T Consensus 2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813 2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence 0012456789999999998888653 589999999974321 123345567899999999
Q ss_pred HHHHHHHHhcCCCEEEEeeccc-eecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-CceEEEEecCc
Q psy7590 92 DNVLDTSYKQGVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH-GVTYTSVIPCN 169 (358)
Q Consensus 92 ~~ll~aa~~~~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~ 169 (358)
.++++++.....+++|++||.. .||.. ....|+.+|...+.+.+.++.+. ++++..+.++.
T Consensus 2157 ~~Ll~al~~~~~~~IV~~SSvag~~G~~-----------------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~ 2219 (2582)
T TIGR02813 2157 LSLLAALNAENIKLLALFSSAAGFYGNT-----------------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGP 2219 (2582)
T ss_pred HHHHHHHHHhCCCeEEEEechhhcCCCC-----------------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCe
Confidence 9999999887777899999984 44422 12269999999988888777665 58889999877
Q ss_pred ccCC
Q psy7590 170 VFGP 173 (358)
Q Consensus 170 v~G~ 173 (358)
+-+.
T Consensus 2220 wdtg 2223 (2582)
T TIGR02813 2220 WDGG 2223 (2582)
T ss_pred ecCC
Confidence 6543
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.3e-07 Score=85.85 Aligned_cols=147 Identities=20% Similarity=0.220 Sum_probs=103.9
Q ss_pred cCC--ChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhc------cCCcEEEEc
Q psy7590 11 GGT--GLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSK------YKPTHVIHL 66 (358)
Q Consensus 11 Gat--G~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~------~~~d~Vih~ 66 (358)
|++ +-||.++++.|+++|.+ .... ....+.+.+|+++++++.++++. .++|++||+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 566 99999999999999984 0000 00122468999999999888754 369999999
Q ss_pred ccccCC----cc---ccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 67 AAMVGG----LF---HNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 67 a~~~~~----~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
++.... .. .+.++....++.|+.+...+.+++... .-.++|++||..... + .|..
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~---------------~-~~~~ 144 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQR---------------P-MPGY 144 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTS---------------B-STTT
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcc---------------c-Cccc
Confidence 987542 00 122345678899999999998888553 124799999885421 1 1222
Q ss_pred cchHHHHHHHHHHHHHHHhh----cCceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...+.+++.++.. .|+++..|.|+.+-.+
T Consensus 145 ~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~ 184 (241)
T PF13561_consen 145 SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETP 184 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSH
T ss_pred hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceecc
Confidence 27999999999888777553 5899999999877643
|
... |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=9e-07 Score=83.27 Aligned_cols=154 Identities=15% Similarity=0.066 Sum_probs=100.0
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHcccc----C----------C---CC---------ce-----eeecccccCCCHH-
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKR----D----------D---ET---------WI-----FVSSKEADLSNLE- 49 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~----~----------~---~~---------~~-----~~~~~~~Dl~~~~- 49 (358)
.|.++||||+ .-||+++++.|.++|.+ . . .+ .. .+..+.+|+.+++
T Consensus 8 gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~ 87 (299)
T PRK06300 8 GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPED 87 (299)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEE
Confidence 4679999995 89999999999999973 0 0 00 00 0001123444442
Q ss_pred -----------------HHHHHHh----cc-CCcEEEEcccccC----Cc-cccccchhhHHHHHHHHHHHHHHHHHhc-
Q psy7590 50 -----------------STQQLFS----KY-KPTHVIHLAAMVG----GL-FHNMSHNLDFFRVNMKINDNVLDTSYKQ- 101 (358)
Q Consensus 50 -----------------~~~~~~~----~~-~~d~Vih~a~~~~----~~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~- 101 (358)
++.++++ .+ ++|++||+|+... +. ..+.++....+++|+.+...+.+++...
T Consensus 88 v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m 167 (299)
T PRK06300 88 VPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIM 167 (299)
T ss_pred eecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3444443 22 5999999997532 11 1223445678899999999999888764
Q ss_pred -CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc-chHHHHHHHHHHHHHHHhh----cCceEEEEecCcccCC
Q psy7590 102 -GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF-GYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 102 -~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~-~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~ 173 (358)
.-.++|.+||....- ..|... .|+.+|...+.+.+.++.+ +|+.+..|.|+.+--+
T Consensus 168 ~~~G~ii~iss~~~~~----------------~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~ 229 (299)
T PRK06300 168 NPGGSTISLTYLASMR----------------AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASR 229 (299)
T ss_pred hcCCeEEEEeehhhcC----------------cCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccCh
Confidence 123688888764321 112211 5999999999988887764 3799999999877543
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.3e-06 Score=73.54 Aligned_cols=156 Identities=16% Similarity=0.168 Sum_probs=102.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc----------------CCCCceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR----------------DDETWIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~----------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
+..+||||+.-||++|++.|.+.|.| .-...-......+|+.++.++...++.. .|+++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvl 94 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVL 94 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEE
Confidence 46899999999999999999999985 0011111223478999998887766542 69999
Q ss_pred EEcccccCC---ccccccchhhHHHHHHHHHHHHHHHHHhc----CCC--EEEEeecc-ceecCCCCCCCccccccCCCC
Q psy7590 64 IHLAAMVGG---LFHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVK--KVVSCLST-CIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 64 ih~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~--r~V~~SS~-~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||++... ..-..++....+.+|+.|+..+-+++.+. +.+ ++|.+||. +-.|.-....+.. .
T Consensus 95 VncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAA-------s 167 (256)
T KOG1200|consen 95 VNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAA-------S 167 (256)
T ss_pred EEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhh-------h
Confidence 999998531 11123567789999999999998888765 222 89999997 3333221111110 0
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 174 (358)
+. . .-|.+|..+.+ .++ .++++-.+-|+.|--|-
T Consensus 168 K~-G-vIgftktaArE----la~-knIrvN~VlPGFI~tpM 201 (256)
T KOG1200|consen 168 KG-G-VIGFTKTAARE----LAR-KNIRVNVVLPGFIATPM 201 (256)
T ss_pred cC-c-eeeeeHHHHHH----Hhh-cCceEeEeccccccChh
Confidence 00 1 23344444433 333 38999999999887663
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.5e-06 Score=78.67 Aligned_cols=153 Identities=22% Similarity=0.204 Sum_probs=106.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------------------CCCCceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------------------DDETWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.+|+|||++.-+|..++..+..+|.. .......+.+..+|+.|.+++...++.. .+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 37999999999999999999999973 1112223567789999999999988765 69
Q ss_pred cEEEEcccccCC-cccc--ccchhhHHHHHHHHHHHHHHHHHhcC--CC---EEEEeecc-ceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGG-LFHN--MSHNLDFFRVNMKINDNVLDTSYKQG--VK---KVVSCLST-CIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~-~~~~--~~~~~~~~~~nv~~~~~ll~aa~~~~--v~---r~V~~SS~-~vy~~~~~~~~~E~~~~~~ 131 (358)
|.+|+|||..-+ .... .+.-....++|..++.+++.++..+- +. +++.+||. +.++-
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i-------------- 179 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGI-------------- 179 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCc--------------
Confidence 999999997432 1111 12234578899999999999987653 22 78888887 33321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...+ .|+.+|...--+.....++ +|+.++..-|+.+--|+
T Consensus 180 --~Gys-aYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpG 222 (331)
T KOG1210|consen 180 --YGYS-AYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPG 222 (331)
T ss_pred --cccc-ccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCc
Confidence 1122 5777776655555444433 37888877787776664
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.6e-06 Score=73.45 Aligned_cols=157 Identities=17% Similarity=0.128 Sum_probs=103.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccc--------cCCC-----------CceeeecccccCCCHHHHHHHHhc-----
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEK--------RDDE-----------TWIFVSSKEADLSNLESTQQLFSK----- 57 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~--------~~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~----- 57 (358)
|.++.|+||||+.-||-.|+++|++... |... .-..+..++.|+++.+++.++..+
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV 80 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence 4567899999999999999999997643 1111 122344558999999888877654
Q ss_pred --cCCcEEEEcccccCCcccccc----chhhHHHHHHHHHHHHHHHH----HhcCCC-----------EEEEeeccceec
Q psy7590 58 --YKPTHVIHLAAMVGGLFHNMS----HNLDFFRVNMKINDNVLDTS----YKQGVK-----------KVVSCLSTCIFP 116 (358)
Q Consensus 58 --~~~d~Vih~a~~~~~~~~~~~----~~~~~~~~nv~~~~~ll~aa----~~~~v~-----------r~V~~SS~~vy~ 116 (358)
.+.+++|++||.........+ .....+++|..++..+.++. +++..+ .+|++||.+.--
T Consensus 81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 378999999998543211111 13457788877766555443 333323 788898874320
Q ss_pred CCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCccc
Q psy7590 117 DKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVF 171 (358)
Q Consensus 117 ~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~ 171 (358)
.. . .+.+.. .|..||.+.-...+..+-.. ++-++.+-||||-
T Consensus 161 ~~--------~----~~~~~~-AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 161 GG--------F----RPGGLS-AYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred CC--------C----CCcchh-hhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 00 0 222333 89999999888888776553 5778888888874
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.7e-06 Score=76.23 Aligned_cols=145 Identities=25% Similarity=0.222 Sum_probs=101.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------------------CCCCceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------------------DDETWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|++++||+.|-||+.+.++|++.|.. .......+-++..|+++..++++++++. ..
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i 84 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI 84 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence 478999999999999999999999872 2222333445699999999999999863 59
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHH----HHHHHHHhcC---CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKIND----NVLDTSYKQG---VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~---v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|++||-|+... +.+.+....+|+.|.. ..+++..+.. -.-+|..||..-..+- |.
T Consensus 85 DIlINgAGi~~-----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~-------------p~ 146 (261)
T KOG4169|consen 85 DILINGAGILD-----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM-------------PV 146 (261)
T ss_pred EEEEccccccc-----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc-------------cc
Confidence 99999999863 4667778888876654 4555554432 2358888886322111 33
Q ss_pred CCCCcchHHHHHHHHH-----HHHHHHhhcCceEEEEecCc
Q psy7590 134 HPSNFGYSHAKRMLDV-----LNKAYYQQHGVTYTSVIPCN 169 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~-----~~~~~~~~~g~~~~ilRp~~ 169 (358)
.| .|+.||.-.-. ....+.+++|+.+..+.|+.
T Consensus 147 ~p---VY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~ 184 (261)
T KOG4169|consen 147 FP---VYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGF 184 (261)
T ss_pred ch---hhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCc
Confidence 33 68888874322 22335677899999998863
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=2e-06 Score=74.55 Aligned_cols=89 Identities=12% Similarity=0.101 Sum_probs=66.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C----------CCCceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D----------DETWIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~----------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
|+++|||||||+|. +++.|.+.|++ . ......+..+.+|++|++++.++++.. ++|++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 48999999999886 99999999984 1 001123445678999999998888642 46666
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC----EEEEeeccc
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK----KVVSCLSTC 113 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~----r~V~~SS~~ 113 (358)
|+..- +.++.++..+|++.+++ +||++-.+.
T Consensus 80 v~~vh-------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~ 114 (177)
T PRK08309 80 VAWIH-------------------SSAKDALSVVCRELDGSSETYRLFHVLGSA 114 (177)
T ss_pred EEecc-------------------ccchhhHHHHHHHHccCCCCceEEEEeCCc
Confidence 65422 44778899999999998 899887553
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.4e-06 Score=61.72 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=39.9
Q ss_pred HHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 294 AIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 294 ~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
++.++.|+++++.+.+.++++......|++|++++| ||+|. +|+++++++.+|++++..
T Consensus 1 A~e~vtG~~i~~~~~~rR~GD~~~~~Ad~~kA~~~L--gW~p~~~L~~~i~~~w~W~~~np~ 60 (62)
T PF13950_consen 1 AFEKVTGKKIPVEYAPRRPGDPAHLVADISKAREEL--GWKPKYSLEDMIRDAWNWQKKNPN 60 (62)
T ss_dssp HHHHHHTS---EEEE---TT--SEE-B--HHHHHHC------SSSHHHHHHHHHHHHHHSTT
T ss_pred CcHHHHCCCCCceECCCCCCchhhhhCCHHHHHHHh--CCCcCCCHHHHHHHHHHHHHHCcC
Confidence 467889999999999999999999999999999999 99966 999999999999988753
|
... |
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.16 E-value=1.5e-05 Score=75.82 Aligned_cols=161 Identities=14% Similarity=0.096 Sum_probs=94.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc-------c------CC--CCceee--ecc------cccCCCHHHHHHHHhccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK-------R------DD--ETWIFV--SSK------EADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~-------~------~~--~~~~~~--~~~------~~Dl~~~~~~~~~~~~~~~ 60 (358)
..||+||||+|++|++++..|+..+. + .. ...... +.. ..|+....++.+.++ ++
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~--~a 79 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFK--DV 79 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhC--CC
Confidence 45899999999999999999987542 1 10 111111 111 112323456667777 69
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCE-EEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKK-VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r-~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
|+|||+|+.... ...+..+.++.|+...+.+.+...++. .+- +|.+|...- -......+... ...+..
T Consensus 80 DiVI~tAG~~~~---~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD---~~t~~~~k~~~---~~~~~~- 149 (325)
T cd01336 80 DVAILVGAMPRK---EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPAN---TNALILLKYAP---SIPKEN- 149 (325)
T ss_pred CEEEEeCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHH---HHHHHHHHHcC---CCCHHH-
Confidence 999999998642 234568899999999999999988884 343 444442100 00000111110 111111
Q ss_pred chHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
.-+.+.+..-++-...+++.+++...+.-..|+|.+..
T Consensus 150 ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~ 187 (325)
T cd01336 150 FTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS 187 (325)
T ss_pred EEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence 22233444455555566677888777776667787654
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=5.1e-06 Score=74.98 Aligned_cols=69 Identities=19% Similarity=0.216 Sum_probs=48.7
Q ss_pred CCCEEEEEcCC----------------ChhHHHHHHHHHHcccc------C----CCC---ceeeecccccCCCHHHHHH
Q psy7590 3 EEKIILVTGGT----------------GLVGKAIEKIVKEEEKR------D----DET---WIFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 3 ~~~~VlItGat----------------G~lG~~l~~~L~~~g~~------~----~~~---~~~~~~~~~Dl~~~~~~~~ 53 (358)
+.|+||||+|. ||+|++|+++|+++|++ . ... ...+..+.++....+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 56799999885 99999999999999984 0 010 1112233453334467777
Q ss_pred HHhccCCcEEEEcccccC
Q psy7590 54 LFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 54 ~~~~~~~d~Vih~a~~~~ 71 (358)
++...++|+|||+||..+
T Consensus 82 ~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 82 IITHEKVDAVIMAAAGSD 99 (229)
T ss_pred HhcccCCCEEEECccccc
Confidence 776557999999999865
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.4e-05 Score=74.28 Aligned_cols=158 Identities=16% Similarity=0.183 Sum_probs=104.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC-CC--Cceeee---------cccccCCCH-----------HHHHHHHhccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD-DE--TWIFVS---------SKEADLSNL-----------ESTQQLFSKYKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~-~~--~~~~~~---------~~~~Dl~~~-----------~~~~~~~~~~~~ 60 (358)
.+||.|+|++|.+|++++..|+..+.-. +. ....++ -...|+.+. ....+.+. ++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~--da 79 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFK--DA 79 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhC--CC
Confidence 4699999999999999999998766522 00 000010 012222221 11224455 69
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC-CEEEEeeccceecCCCCCCCccccc---cCCCCCCC
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV-KKVVSCLSTCIFPDKTTYPIDETMV---HNGPPHPS 136 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-~r~V~~SS~~vy~~~~~~~~~E~~~---~~~~~~p~ 136 (358)
|+||.+|+... ....+..+.+..|+...+.+.+...+++. .-+|.+-|- |+|--.+ ...+.-|.
T Consensus 80 DivvitaG~~~---k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN---------PvD~~t~~~~k~sg~~p~ 147 (322)
T cd01338 80 DWALLVGAKPR---GPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN---------PCNTNALIAMKNAPDIPP 147 (322)
T ss_pred CEEEEeCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC---------cHHHHHHHHHHHcCCCCh
Confidence 99999999753 22346677899999999999999999873 544433331 1111100 00011222
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
+..||.+++..+++...+++..|++...+|..+|||++.
T Consensus 148 ~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 148 DNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred HheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence 237999999999999999999999999999999999984
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=3.6e-05 Score=66.23 Aligned_cols=68 Identities=18% Similarity=0.178 Sum_probs=51.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
.+.++||||+|.||..+++.|.+.|++ .... ......+.+|+++.+++.++++. .++|
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iD 95 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRID 95 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 367999999999999999999999873 1000 11233468999999988876542 2699
Q ss_pred EEEEcccccC
Q psy7590 62 HVIHLAAMVG 71 (358)
Q Consensus 62 ~Vih~a~~~~ 71 (358)
++||+||...
T Consensus 96 ilVnnAG~~~ 105 (169)
T PRK06720 96 MLFQNAGLYK 105 (169)
T ss_pred EEEECCCcCC
Confidence 9999999744
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.00011 Score=64.91 Aligned_cols=149 Identities=16% Similarity=0.145 Sum_probs=98.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc--------CCCCceeee--------cccccCCCHHHHHHHHh---c--cCCcEEE
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR--------DDETWIFVS--------SKEADLSNLESTQQLFS---K--YKPTHVI 64 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~--------~~~~~~~~~--------~~~~Dl~~~~~~~~~~~---~--~~~d~Vi 64 (358)
-|||||++--||..++..+++++.. .......+. +..+|++....+.+..+ . .+-|.||
T Consensus 8 villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI 87 (253)
T KOG1204|consen 8 VILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIII 87 (253)
T ss_pred EEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEE
Confidence 3799999999999999988887762 111122221 22344444443333332 1 2579999
Q ss_pred EcccccCCccc------cccchhhHHHHHHHHHHHHHHHHHhc--C---CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 65 HLAAMVGGLFH------NMSHNLDFFRVNMKINDNVLDTSYKQ--G---VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 65 h~a~~~~~~~~------~~~~~~~~~~~nv~~~~~ll~aa~~~--~---v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|.||..++... +......+++.|+.+...|...+... + .+.+|++||.+... |.
T Consensus 88 ~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~---------------p~ 152 (253)
T KOG1204|consen 88 HNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR---------------PF 152 (253)
T ss_pred ecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc---------------cc
Confidence 99997654211 12234568899999888888877553 1 26899999985421 11
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcc
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNV 170 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v 170 (358)
.... .|+.+|++-+.+.+..+.+. ++.++.++||.|
T Consensus 153 ~~wa-~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 153 SSWA-AYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVV 190 (253)
T ss_pred cHHH-HhhhhHHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence 1222 89999999999998886653 788889999765
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.3e-05 Score=71.90 Aligned_cols=83 Identities=13% Similarity=0.161 Sum_probs=64.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC---Cc--eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE---TW--IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~---~~--~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|+|||+||||. |+.|++.|.+.|++ +.. .. .+...+..+..+.+++.+.+...++|+||+.+.+..
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA-- 77 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFA-- 77 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHH--
Confidence 48999999999 99999999999984 111 11 111223566678888999999888999999977643
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCC
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVK 104 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~ 104 (358)
...+.++.++|++.+++
T Consensus 78 --------------~~is~~a~~a~~~~~ip 94 (256)
T TIGR00715 78 --------------AQITTNATAVCKELGIP 94 (256)
T ss_pred --------------HHHHHHHHHHHHHhCCc
Confidence 45678899999999986
|
This enzyme was found to be a monomer by gel filtration. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.90 E-value=3.9e-05 Score=73.92 Aligned_cols=81 Identities=22% Similarity=0.238 Sum_probs=62.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc------C--------CCCceeeecccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR------D--------DETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~------~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
||+|||.|+ |++|+.++..|.+++ .+ + ......++....|+.|.+++.+++++ .|+||+++.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~--~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKD--FDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhc--CCEEEEeCC
Confidence 468999998 999999999999998 32 1 11111455668999999999999995 699999977
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+.- ..+++++|.++|+. +|
T Consensus 78 ~~~-------------------~~~i~ka~i~~gv~-yv 96 (389)
T COG1748 78 PFV-------------------DLTILKACIKTGVD-YV 96 (389)
T ss_pred chh-------------------hHHHHHHHHHhCCC-EE
Confidence 642 22689999999974 65
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=8.2e-05 Score=70.41 Aligned_cols=158 Identities=18% Similarity=0.123 Sum_probs=92.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHH-ccc--c-----CCCCceeeecccccCCC-----------HHHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKE-EEK--R-----DDETWIFVSSKEADLSN-----------LESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~-~g~--~-----~~~~~~~~~~~~~Dl~~-----------~~~~~~~~~~~~~d~Vih 65 (358)
|||+|+||+|.+|++++..|+. .+. . ........ ..|+.+ .+++.+.+. ++|+||.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~---alDl~~~~~~~~i~~~~~~d~~~~l~--~~DiVIi 75 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGV---AVDLSHIPTAVKIKGFSGEDPTPALE--GADVVLI 75 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcce---ehhhhcCCCCceEEEeCCCCHHHHcC--CCCEEEE
Confidence 5899999999999999998854 222 1 11111111 123322 234456666 5999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
++|... ....+..+.+..|....+++++++.+++.+++|.+.|--+-- ....+.|.-+.. .--|.+-..|..-+
T Consensus 76 taG~~~---~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~--~t~~~~~~~~~~-sg~p~~rvig~~~L 149 (312)
T PRK05086 76 SAGVAR---KPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNT--TVAIAAEVLKKA-GVYDKNKLFGVTTL 149 (312)
T ss_pred cCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHH--HHHHHHHHHHHh-cCCCHHHEEeeecH
Confidence 999754 223456789999999999999999999999888877642100 000000000000 00010112233323
Q ss_pred HHHHHHHHHHhhcCceEEEEecCcccCCC
Q psy7590 146 MLDVLNKAYYQQHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 146 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 174 (358)
..-++....++..+++..-+. +.|+|.+
T Consensus 150 ds~R~~~~ia~~l~~~~~~v~-~~v~GeH 177 (312)
T PRK05086 150 DVIRSETFVAELKGKQPGEVE-VPVIGGH 177 (312)
T ss_pred HHHHHHHHHHHHhCCChhheE-EEEEEec
Confidence 334455555666677777776 6777876
|
|
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.00017 Score=64.66 Aligned_cols=156 Identities=19% Similarity=0.145 Sum_probs=102.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc--------------------------CCCCceeeecccccCCCHHHHHHHHhc--
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR--------------------------DDETWIFVSSKEADLSNLESTQQLFSK-- 57 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~--------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~-- 57 (358)
-+||||+++-+|-+|+..|++.... -+.+.+.++++.+|++|..++..+..+
T Consensus 5 valITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~ 84 (341)
T KOG1478|consen 5 VALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIK 84 (341)
T ss_pred EEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHH
Confidence 4799999999999999999986541 234467788899999999888777654
Q ss_pred ---cCCcEEEEcccccCCccc------------------------------cccchhhHHHHHHHHHHHHHHHHHhc---
Q psy7590 58 ---YKPTHVIHLAAMVGGLFH------------------------------NMSHNLDFFRVNMKINDNVLDTSYKQ--- 101 (358)
Q Consensus 58 ---~~~d~Vih~a~~~~~~~~------------------------------~~~~~~~~~~~nv~~~~~ll~aa~~~--- 101 (358)
.+.|.|+-.||.+..+.- +.++-..+++.||-|..-++.-....
T Consensus 85 ~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~ 164 (341)
T KOG1478|consen 85 QRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCH 164 (341)
T ss_pred HHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhc
Confidence 268999998887543211 22333568889998887766555432
Q ss_pred -CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecC
Q psy7590 102 -GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPC 168 (358)
Q Consensus 102 -~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~ 168 (358)
.-..+|.+||...-... .+=++.. -.+... +|..||.+.+.+-.+..+.. |+.--++.|+
T Consensus 165 ~~~~~lvwtSS~~a~kk~----lsleD~q--~~kg~~-pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg 228 (341)
T KOG1478|consen 165 SDNPQLVWTSSRMARKKN----LSLEDFQ--HSKGKE-PYSSSKRLTDLLHVALNRNFKPLGINQYVVQPG 228 (341)
T ss_pred CCCCeEEEEeeccccccc----CCHHHHh--hhcCCC-CcchhHHHHHHHHHHHhccccccchhhhcccCc
Confidence 23379999997553221 1111111 122222 79999999988766655542 4444444444
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00029 Score=65.15 Aligned_cols=154 Identities=17% Similarity=0.133 Sum_probs=99.5
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc------C------------CCCceeeecccccCCCHH----HHHHHHhccCCcEEE
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR------D------------DETWIFVSSKEADLSNLE----STQQLFSKYKPTHVI 64 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~------~------------~~~~~~~~~~~~Dl~~~~----~~~~~~~~~~~d~Vi 64 (358)
.+|||||.-||++.+++|.++|.. + ......+..+..|.++.+ .+.+.+....+.++|
T Consensus 52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILV 131 (312)
T KOG1014|consen 52 AVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILV 131 (312)
T ss_pred EEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEEE
Confidence 689999999999999999999983 1 111134455567776554 577777767788999
Q ss_pred EcccccCCccc--ccc---chhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 65 HLAAMVGGLFH--NMS---HNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 65 h~a~~~~~~~~--~~~---~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|++|....... ... .......+|+.++..+.+... +.+-.-+|.+||.+-- .+.|
T Consensus 132 NNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~----------------~p~p 195 (312)
T KOG1014|consen 132 NNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGL----------------IPTP 195 (312)
T ss_pred ecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccc----------------ccCh
Confidence 99998651111 111 123455667776555555543 3333468889887421 2333
Q ss_pred CCcchHHHHHHHHHHHHHHHh---hcCceEEEEecCcccCCCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQ---QHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~---~~g~~~~ilRp~~v~G~~~~ 176 (358)
....|+.+|...+.+-..... ..|+.+-.+-|..|..+-..
T Consensus 196 ~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~ 239 (312)
T KOG1014|consen 196 LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAK 239 (312)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccc
Confidence 333799999966655444433 34888888888888776543
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=97.71 E-value=5.1e-05 Score=64.23 Aligned_cols=152 Identities=24% Similarity=0.247 Sum_probs=105.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC--------CCceeeecccccCCCHHHHHHHHhcc-CCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD--------ETWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~--------~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~ 68 (358)
.+.|++||+.--||+.+++.|.+.|-+ .. .....+..+.+|+.+-+.+.+++-.. ..|.+++.|+
T Consensus 7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAg 86 (245)
T KOG1207|consen 7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNAG 86 (245)
T ss_pred ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccch
Confidence 357999999999999999999999873 00 11111344589999999888888664 4789999998
Q ss_pred ccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCC-EEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 69 MVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 69 ~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
....- .-..++-+..+++|+.+..++.+...+ .+++ .+|.+||.+. ..+++..+ .|
T Consensus 87 vA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas-----~R~~~nHt-----------vY 150 (245)
T KOG1207|consen 87 VATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQAS-----IRPLDNHT-----------VY 150 (245)
T ss_pred hhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhc-----ccccCCce-----------EE
Confidence 74310 012234456788899888888777443 3333 7899999854 23333332 79
Q ss_pred HHHHHHHHHHHHHHHhhcC---ceEEEEecCccc
Q psy7590 141 SHAKRMLDVLNKAYYQQHG---VTYTSVIPCNVF 171 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~g---~~~~ilRp~~v~ 171 (358)
..+|...+.+.+..+-+.| +++-.+-|..|.
T Consensus 151 catKaALDmlTk~lAlELGp~kIRVNsVNPTVVm 184 (245)
T KOG1207|consen 151 CATKAALDMLTKCLALELGPQKIRVNSVNPTVVM 184 (245)
T ss_pred eecHHHHHHHHHHHHHhhCcceeEeeccCCeEEE
Confidence 9999999988887776654 667777777654
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00036 Score=66.35 Aligned_cols=157 Identities=18% Similarity=0.199 Sum_probs=94.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCC-----C-----Cc--eeeecccccCCCH-----------HHHHHHHhccCCcE
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDD-----E-----TW--IFVSSKEADLSNL-----------ESTQQLFSKYKPTH 62 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~-----~-----~~--~~~~~~~~Dl~~~-----------~~~~~~~~~~~~d~ 62 (358)
||+|+||+|.+|++++..|...+.-.. . +. ........|+.+. ....+.++ ++|+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~--~aDi 79 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFK--DVDV 79 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhC--CCCE
Confidence 799999999999999999987653110 0 00 1112224455554 34456666 6999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCccccc---cCCCCCCCCc
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDETMV---HNGPPHPSNF 138 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~---~~~~~~p~~~ 138 (358)
|||+||... ....+-.+....|+...+.+.+...+.. .+-++.+-|- |+|--.. .....-|.+.
T Consensus 80 VVitAG~~~---~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN---------PvD~~t~~~~k~sg~~p~~~ 147 (323)
T cd00704 80 AILVGAFPR---KPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGN---------PANTNALIALKNAPNLPPKN 147 (323)
T ss_pred EEEeCCCCC---CcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCC---------cHHHHHHHHHHHcCCCCHHH
Confidence 999999754 2335677899999999999999999984 5543333221 2111000 0001111111
Q ss_pred chHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
.-+.+.+..-++-...+++.+++...+.-..|.|.+..
T Consensus 148 vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~ 185 (323)
T cd00704 148 FTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN 185 (323)
T ss_pred EEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccC
Confidence 33556666556666666666766555554556787644
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00024 Score=67.80 Aligned_cols=91 Identities=21% Similarity=0.289 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc--------CCC-Cc--eeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR--------DDE-TW--IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~--------~~~-~~--~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
|++|++|+|+||||++|..|++.|.+.++. +.. .. ........++.+.+.. + +. ++|+||-+...
T Consensus 1 m~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~~~l~~~~~~~~-~-~~--~vD~vFla~p~ 76 (336)
T PRK05671 1 MSQPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAGKNLRVREVDSF-D-FS--QVQLAFFAAGA 76 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCCcceEEeeCChH-H-hc--CCCEEEEcCCH
Confidence 888889999999999999999999976652 110 00 0011123344333322 2 44 59999965431
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecccee
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIF 115 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy 115 (358)
+ ....+++.+.++|+ ++|=.|+..=+
T Consensus 77 -~------------------~s~~~v~~~~~~G~-~VIDlS~~fR~ 102 (336)
T PRK05671 77 -A------------------VSRSFAEKARAAGC-SVIDLSGALPS 102 (336)
T ss_pred -H------------------HHHHHHHHHHHCCC-eEEECchhhcC
Confidence 1 12337777778887 48878877543
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00025 Score=64.11 Aligned_cols=82 Identities=20% Similarity=0.134 Sum_probs=45.9
Q ss_pred CCChhHHHHHHHHHHcccc------CCC----CceeeecccccCCC--HHHHHHHHhccCCcEEEEcccccCCccccccc
Q psy7590 12 GTGLVGKAIEKIVKEEEKR------DDE----TWIFVSSKEADLSN--LESTQQLFSKYKPTHVIHLAAMVGGLFHNMSH 79 (358)
Q Consensus 12 atG~lG~~l~~~L~~~g~~------~~~----~~~~~~~~~~Dl~~--~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~ 79 (358)
+||++|++|+++|+++|++ ... ....++++.++..+ .+.+.+.+. ++|+|||+||..+. ..
T Consensus 24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~~~~v~~i~v~s~~~m~~~l~~~~~--~~DivIh~AAvsd~-----~~ 96 (229)
T PRK06732 24 STGQLGKIIAETFLAAGHEVTLVTTKTAVKPEPHPNLSIIEIENVDDLLETLEPLVK--DHDVLIHSMAVSDY-----TP 96 (229)
T ss_pred cchHHHHHHHHHHHhCCCEEEEEECcccccCCCCCCeEEEEEecHHHHHHHHHHHhc--CCCEEEeCCccCCc-----ee
Confidence 4899999999999999984 111 01123333322111 234444554 58999999998641 11
Q ss_pred hhhHHHHHHHHHHHHHHHHHh
Q psy7590 80 NLDFFRVNMKINDNVLDTSYK 100 (358)
Q Consensus 80 ~~~~~~~nv~~~~~ll~aa~~ 100 (358)
....-..+...+.++.++++.
T Consensus 97 ~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 97 VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred hhhhhhhhhhhhhhhhhhhcc
Confidence 111222334445556666654
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.01 Score=52.79 Aligned_cols=210 Identities=18% Similarity=0.150 Sum_probs=120.1
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHHHcccc-----CC-----------CCceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 2 AEEKIILVTGGT--GLVGKAIEKIVKEEEKR-----DD-----------ETWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 2 ~~~~~VlItGat--G~lG~~l~~~L~~~g~~-----~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
++.|++||+|-. --|++.|++.|.++|-+ .. ..+...-.+++|+++.+++.++++..
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g 83 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWG 83 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence 346899999974 67999999999999873 00 00001123589999999999988652
Q ss_pred CCcEEEEcccccCCc-------cccccchhhHHHHHHHHHHHHHHHHHhc---C--CCEEEEeeccceecCCCCCCCccc
Q psy7590 59 KPTHVIHLAAMVGGL-------FHNMSHNLDFFRVNMKINDNVLDTSYKQ---G--VKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~--v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
+.|.++|+.++..-. ..+.+......++..-....|.++++.. | +-.+-|..|..+
T Consensus 84 ~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~------------ 151 (259)
T COG0623 84 KLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERV------------ 151 (259)
T ss_pred cccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceee------------
Confidence 699999999985410 0011112223333333344444444432 1 113334444322
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhhcC---ceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccc
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHG---VTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQS 203 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g---~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (358)
-|....-|..|+..|.-++..+...| +++-.+-. ||-.+-. ...+..| ..++....+
T Consensus 152 -------vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISA----GPIrTLA---asgI~~f-~~~l~~~e~----- 211 (259)
T COG0623 152 -------VPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISA----GPIRTLA---ASGIGDF-RKMLKENEA----- 211 (259)
T ss_pred -------cCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecc----cchHHHH---hhccccH-HHHHHHHHh-----
Confidence 12222579999999999998887764 44444432 4443321 1223332 334443333
Q ss_pred hhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCC-CCceEEccC
Q psy7590 204 VFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSV-EPIILSVDE 282 (358)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~~v~n~~~ 282 (358)
.-|+. .-+..+|++....+++..-..+ .+++.++.+
T Consensus 212 ----------------------------------~aPl~---------r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~ 248 (259)
T COG0623 212 ----------------------------------NAPLR---------RNVTIEEVGNTAAFLLSDLSSGITGEIIYVDS 248 (259)
T ss_pred ----------------------------------hCCcc---------CCCCHHHhhhhHHHHhcchhcccccceEEEcC
Confidence 22322 1256899999888888764442 345777877
Q ss_pred CCcc
Q psy7590 283 KDEV 286 (358)
Q Consensus 283 ~~~~ 286 (358)
|..+
T Consensus 249 G~~i 252 (259)
T COG0623 249 GYHI 252 (259)
T ss_pred Ccee
Confidence 7553
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0004 Score=67.75 Aligned_cols=80 Identities=26% Similarity=0.298 Sum_probs=55.6
Q ss_pred EEEEcCCChhHHHHHHHHHHccc--c---------------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEK--R---------------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~--~---------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
|+|.|| |++|+.+++.|.+.+. + .......++.+..|+.|.+++.++++ ++|+||||+++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~--~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR--GCDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT--TSSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh--cCCEEEECCcc
Confidence 799999 9999999999998863 1 11123345666899999999999999 58999999886
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
.. ...++++|.++|+ ++|=+
T Consensus 78 ~~-------------------~~~v~~~~i~~g~-~yvD~ 97 (386)
T PF03435_consen 78 FF-------------------GEPVARACIEAGV-HYVDT 97 (386)
T ss_dssp GG-------------------HHHHHHHHHHHT--EEEES
T ss_pred ch-------------------hHHHHHHHHHhCC-Ceecc
Confidence 42 1247888888887 56653
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00014 Score=61.50 Aligned_cols=148 Identities=18% Similarity=0.235 Sum_probs=97.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEEEc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHL 66 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~ 66 (358)
-.|||||.+-+|..-++.|.++|-. +..+ ...+-+..+|+++++++..++... +.|+.++|
T Consensus 11 valvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vnc 90 (260)
T KOG1199|consen 11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNC 90 (260)
T ss_pred eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeec
Confidence 4699999999999999999999863 1110 112345589999999999888642 68999999
Q ss_pred ccccCC---------ccccccchhhHHHHHHHHHHHHHHHHHh--------cCCC--EEEEeeccceecCCCCCCCcccc
Q psy7590 67 AAMVGG---------LFHNMSHNLDFFRVNMKINDNVLDTSYK--------QGVK--KVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 67 a~~~~~---------~~~~~~~~~~~~~~nv~~~~~ll~aa~~--------~~v~--r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
|+.... ..+..++-...+++|+.||.|++..... ++-+ -+|.+.|...|..+..
T Consensus 91 agia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g------- 163 (260)
T KOG1199|consen 91 AGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG------- 163 (260)
T ss_pred cceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc-------
Confidence 997321 1122345566788999999999876542 1122 2555555566643321
Q ss_pred ccCCCCCCCCcchHHHHHHHH----HHHHHHHhhcCceEEEEecCcc
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLD----VLNKAYYQQHGVTYTSVIPCNV 170 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E----~~~~~~~~~~g~~~~ilRp~~v 170 (358)
...|+.||...- -+.+.++.. |++++.+-|+.+
T Consensus 164 ---------qaaysaskgaivgmtlpiardla~~-gir~~tiapglf 200 (260)
T KOG1199|consen 164 ---------QAAYSASKGAIVGMTLPIARDLAGD-GIRFNTIAPGLF 200 (260)
T ss_pred ---------hhhhhcccCceEeeechhhhhcccC-ceEEEeeccccc
Confidence 116888886433 334444333 889999888644
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00049 Score=57.33 Aligned_cols=98 Identities=17% Similarity=0.248 Sum_probs=63.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeee--cccccCCCHHHH--------------HHHHhccCCcEEEEccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVS--SKEADLSNLEST--------------QQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~--~~~~Dl~~~~~~--------------~~~~~~~~~d~Vih~a~ 68 (358)
|||.|+|++|.+|++++..|+..+.-+...+.... ..++...|.+.. .+.++ ++|+||-+|+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~--~aDivvitag 78 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALK--DADIVVITAG 78 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGT--TESEEEETTS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccc--cccEEEEecc
Confidence 58999999999999999999988652111111110 001111111111 12333 5899999999
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
... ....+..+.++.|....+.+.+...+.+.+.++
T Consensus 79 ~~~---~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~v 114 (141)
T PF00056_consen 79 VPR---KPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIV 114 (141)
T ss_dssp TSS---STTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEE
T ss_pred ccc---cccccHHHHHHHhHhHHHHHHHHHHHhCCccEE
Confidence 753 233557778999999999999999999855333
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0015 Score=62.18 Aligned_cols=156 Identities=15% Similarity=0.157 Sum_probs=94.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccC--CC-Ccee---------eecccccCCCHH-----------HHHHHHhccCCcE
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRD--DE-TWIF---------VSSKEADLSNLE-----------STQQLFSKYKPTH 62 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~--~~-~~~~---------~~~~~~Dl~~~~-----------~~~~~~~~~~~d~ 62 (358)
+|+|+|++|.+|++++..|...+.-. .. .... ..-...|+.+.. ...+.+. ++|+
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~--~aDi 78 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFT--DVDV 78 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhC--CCCE
Confidence 58999999999999999998754311 00 1111 112244555554 3345666 5999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCccccc----cCCCCCCCC
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDETMV----HNGPPHPSN 137 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~----~~~~~~p~~ 137 (358)
|||+|+... ....+..+....|+...+.+.+...++. .+-+|.+-|- |+|--.. ..+.+.+..
T Consensus 79 VVitAG~~~---~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN---------PvDv~t~v~~~~sg~~~~~v 146 (324)
T TIGR01758 79 AILVGAFPR---KEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN---------PANTNALVLSNYAPSIPPKN 146 (324)
T ss_pred EEEcCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC---------cHHHHHHHHHHHcCCCCcce
Confidence 999999754 2224467899999999999999999984 5444433331 1111000 000111112
Q ss_pred cchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
.=..+.+..-++-...+++.+++...+.-..|+|.+..
T Consensus 147 -ig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~ 184 (324)
T TIGR01758 147 -FSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSS 184 (324)
T ss_pred -EEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCC
Confidence 22334455555555666777888777776677887654
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >KOG2733|consensus | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00056 Score=64.22 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=48.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHc----ccc---------------------CCCCceeeecccccCCCHHHHHHHHhccCC
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEE----EKR---------------------DDETWIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~----g~~---------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
-++|.|||||.|.+++.++.+. +.. ....+....++.+|..|++++.+..+ ++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak--~~ 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK--QA 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh--hh
Confidence 4899999999999999999983 331 11112222255799999999999999 69
Q ss_pred cEEEEccccc
Q psy7590 61 THVIHLAAMV 70 (358)
Q Consensus 61 d~Vih~a~~~ 70 (358)
.+|+||+|+-
T Consensus 85 ~vivN~vGPy 94 (423)
T KOG2733|consen 85 RVIVNCVGPY 94 (423)
T ss_pred EEEEeccccc
Confidence 9999999974
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0013 Score=64.16 Aligned_cols=69 Identities=17% Similarity=0.201 Sum_probs=51.3
Q ss_pred CCCEEEEEcC----------------CChhHHHHHHHHHHcccc-----CCCCc-eeeecccccCCCHHHHHHHHhc--c
Q psy7590 3 EEKIILVTGG----------------TGLVGKAIEKIVKEEEKR-----DDETW-IFVSSKEADLSNLESTQQLFSK--Y 58 (358)
Q Consensus 3 ~~~~VlItGa----------------tG~lG~~l~~~L~~~g~~-----~~~~~-~~~~~~~~Dl~~~~~~~~~~~~--~ 58 (358)
+.++|||||| +|.+|.+++++|.++|.+ .+... ........|+++.+++.+++.+ .
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~~~~~~~~dv~~~~~~~~~v~~~~~ 266 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPTPAGVKRIDVESAQEMLDAVLAALP 266 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccCCCCcEEEccCCHHHHHHHHHHhcC
Confidence 3478999999 999999999999999974 11111 1111235789999888888754 2
Q ss_pred CCcEEEEcccccC
Q psy7590 59 KPTHVIHLAAMVG 71 (358)
Q Consensus 59 ~~d~Vih~a~~~~ 71 (358)
++|++||+||...
T Consensus 267 ~~DilI~~Aav~d 279 (399)
T PRK05579 267 QADIFIMAAAVAD 279 (399)
T ss_pred CCCEEEEcccccc
Confidence 5899999999754
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0057 Score=58.22 Aligned_cols=161 Identities=14% Similarity=0.135 Sum_probs=96.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccC---CCCceeeec---------ccccCCCHH-----------HHHHHHhc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRD---DETWIFVSS---------KEADLSNLE-----------STQQLFSK 57 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~---~~~~~~~~~---------~~~Dl~~~~-----------~~~~~~~~ 57 (358)
|.+++||.|+|++|.+|++++..|...+.-. ......++. ...|+.+.. ...+.+.
T Consensus 1 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~- 79 (326)
T PRK05442 1 MKAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFK- 79 (326)
T ss_pred CCCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhC-
Confidence 7788899999999999999999988765421 001111111 122332221 1123444
Q ss_pred cCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CC-EEEEeeccceecCCCCCCCccccc---cCCC
Q psy7590 58 YKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VK-KVVSCLSTCIFPDKTTYPIDETMV---HNGP 132 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~-r~V~~SS~~vy~~~~~~~~~E~~~---~~~~ 132 (358)
++|+||-+|+... ....+..+.+..|..-.+.+.+...++. .+ .+|.+|- |+|--.. ...+
T Consensus 80 -daDiVVitaG~~~---k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN----------PvDv~t~v~~k~s~ 145 (326)
T PRK05442 80 -DADVALLVGARPR---GPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN----------PANTNALIAMKNAP 145 (326)
T ss_pred -CCCEEEEeCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC----------chHHHHHHHHHHcC
Confidence 6999999999643 2235677899999999999999999954 34 4444442 1111100 0001
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
--|.+...|.+.+..-++-...+++.+++...++...|+|.+..
T Consensus 146 g~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~ 189 (326)
T PRK05442 146 DLPAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA 189 (326)
T ss_pred CCCHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC
Confidence 11211134445566666666667777888777776666787643
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0021 Score=60.00 Aligned_cols=64 Identities=14% Similarity=0.121 Sum_probs=48.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------CCCCce------eeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------DDETWI------FVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~------~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
.++|-|||||.|.-++++|+.+|.. +..+.. +.+.-..++.++..+.+.++ +.++|+||+|+..
T Consensus 8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~--~~~VVlncvGPyt 83 (382)
T COG3268 8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMAS--RTQVVLNCVGPYT 83 (382)
T ss_pred eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHh--cceEEEecccccc
Confidence 6899999999999999999999874 222222 22233445666899999988 6999999999854
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0052 Score=58.80 Aligned_cols=83 Identities=20% Similarity=0.194 Sum_probs=50.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc---------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR---------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~---------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
|++|+|.||||++|..|++.|.++++. .... +...+....|+.+ ..+. ++|+||-+.+.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~-----~~~~--~vDvVf~A~g~ 73 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTT-----FDFS--GVDIALFSAGG 73 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCH-----HHHc--CCCEEEECCCh
Confidence 458999999999999999999997662 0000 1111222233332 1234 59999976542
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
. .+..++....++|+ .+|=.|+..
T Consensus 74 g-------------------~s~~~~~~~~~~G~-~VIDlS~~~ 97 (334)
T PRK14874 74 S-------------------VSKKYAPKAAAAGA-VVIDNSSAF 97 (334)
T ss_pred H-------------------HHHHHHHHHHhCCC-EEEECCchh
Confidence 1 33445566666777 577677654
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0028 Score=57.18 Aligned_cols=60 Identities=18% Similarity=0.238 Sum_probs=41.2
Q ss_pred CCChhHHHHHHHHHHcccc----CC-CCceeeecccccCCCHHHHHHHHhc-----cCCcEEEEcccccC
Q psy7590 12 GTGLVGKAIEKIVKEEEKR----DD-ETWIFVSSKEADLSNLESTQQLFSK-----YKPTHVIHLAAMVG 71 (358)
Q Consensus 12 atG~lG~~l~~~L~~~g~~----~~-~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vih~a~~~~ 71 (358)
++|.+|.+|++.|.++|++ .. ..........+|+.+.+++.++++. .++|++||+||...
T Consensus 23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~~~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d 92 (227)
T TIGR02114 23 STGHLGKIITETFLSAGHEVTLVTTKRALKPEPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSD 92 (227)
T ss_pred cccHHHHHHHHHHHHCCCEEEEEcChhhcccccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEecc
Confidence 4889999999999999984 11 1111111235788888877766532 15899999999754
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0046 Score=50.28 Aligned_cols=81 Identities=17% Similarity=0.233 Sum_probs=49.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc-ccc-------CCCCceeee------cccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE-EKR-------DDETWIFVS------SKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~-g~~-------~~~~~~~~~------~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
|||.|.|++|.+|+.|++.+++. +.+ ......+-+ .....+.-.+++.++++. +|+||++..+
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~--~DVvIDfT~p- 77 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE--ADVVIDFTNP- 77 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH---SEEEEES-H-
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--CCEEEEcCCh-
Confidence 48999999999999999999984 332 110011000 001111123567788885 9999988532
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
..+...++.|.+++++ +|
T Consensus 78 ------------------~~~~~~~~~~~~~g~~-~V 95 (124)
T PF01113_consen 78 ------------------DAVYDNLEYALKHGVP-LV 95 (124)
T ss_dssp ------------------HHHHHHHHHHHHHT-E-EE
T ss_pred ------------------HHhHHHHHHHHhCCCC-EE
Confidence 2455678888888874 55
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0039 Score=60.57 Aligned_cols=91 Identities=19% Similarity=0.313 Sum_probs=55.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----------CCCCce--eeecccccCCCHHHHHHH-HhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----------DDETWI--FVSSKEADLSNLESTQQL-FSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----------~~~~~~--~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~a~~~ 70 (358)
+|||+|.||||++|..|++.|.++.+. ...... .......|+.+.+++... ++ ++|+||-+.+.
T Consensus 38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~--~~DvVf~Alp~- 114 (381)
T PLN02968 38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFS--DVDAVFCCLPH- 114 (381)
T ss_pred ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhc--CCCEEEEcCCH-
Confidence 459999999999999999999988431 000100 111122444433333332 44 59999965432
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecC
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPD 117 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~ 117 (358)
....+++.++ +.++ ++|-.|+..-+.+
T Consensus 115 ------------------~~s~~i~~~~-~~g~-~VIDlSs~fRl~~ 141 (381)
T PLN02968 115 ------------------GTTQEIIKAL-PKDL-KIVDLSADFRLRD 141 (381)
T ss_pred ------------------HHHHHHHHHH-hCCC-EEEEcCchhccCC
Confidence 1444566665 3564 7999999876554
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0026 Score=51.45 Aligned_cols=24 Identities=25% Similarity=0.589 Sum_probs=21.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||.|+||||++|+.|++.|.++.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~ 24 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD 24 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC
Confidence 699999999999999999999543
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0081 Score=56.97 Aligned_cols=101 Identities=18% Similarity=0.235 Sum_probs=65.0
Q ss_pred CCC--CCEEEEEcCCChhHHHHHHHHHHccccCCCCceee-----ecccccCCCHHH----------HHHHHhccCCcEE
Q psy7590 1 MAE--EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV-----SSKEADLSNLES----------TQQLFSKYKPTHV 63 (358)
Q Consensus 1 m~~--~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~-----~~~~~Dl~~~~~----------~~~~~~~~~~d~V 63 (358)
||+ .+||.|+|+ |.+|++++..|+..+......+..+ .-...|+.+... -.+.++ ++|+|
T Consensus 1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~--~adiv 77 (315)
T PRK00066 1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCK--DADLV 77 (315)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhC--CCCEE
Confidence 565 359999997 9999999999998876211111100 000112211110 013455 59999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
|-+|+... ....+..+.+..|....+.+++.+.+.+.+-+|
T Consensus 78 Iitag~~~---k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~v 118 (315)
T PRK00066 78 VITAGAPQ---KPGETRLDLVEKNLKIFKSIVGEVMASGFDGIF 118 (315)
T ss_pred EEecCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 99999753 223456788999999999999999998765333
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.011 Score=56.27 Aligned_cols=160 Identities=16% Similarity=0.174 Sum_probs=95.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccCCC---Cceeeec---------ccccCCCH-----------HHHHHHHhccC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRDDE---TWIFVSS---------KEADLSNL-----------ESTQQLFSKYK 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~~~---~~~~~~~---------~~~Dl~~~-----------~~~~~~~~~~~ 59 (358)
+..||.|+|++|.+|++++..|+..+.-... ....++. ...|+.+. ....+.++ +
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~--d 79 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFK--D 79 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhC--C
Confidence 3458999999999999999999987642200 1111111 01122211 11224444 6
Q ss_pred CcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC-CEEEEeeccceecCCCCCCCccccc---cCCCCCC
Q psy7590 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV-KKVVSCLSTCIFPDKTTYPIDETMV---HNGPPHP 135 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-~r~V~~SS~~vy~~~~~~~~~E~~~---~~~~~~p 135 (358)
+|+||.+||... ....+..+.+..|....+.+.+.+.++.. +.+|.+-|- |+|--.. ...+--|
T Consensus 80 aDvVVitAG~~~---k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN---------PvDv~t~v~~k~s~g~p 147 (323)
T TIGR01759 80 VDAALLVGAFPR---KPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGN---------PANTNALIASKNAPDIP 147 (323)
T ss_pred CCEEEEeCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC---------cHHHHHHHHHHHcCCCC
Confidence 999999999753 23356778999999999999999999976 544444331 2111110 0000111
Q ss_pred CCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
.+...|.+.+..-++-...+++.+++...+.-..|+|.+..
T Consensus 148 ~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~ 188 (323)
T TIGR01759 148 PKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN 188 (323)
T ss_pred HHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC
Confidence 11134445666666666667777887777766677787653
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.048 Score=52.75 Aligned_cols=66 Identities=21% Similarity=0.185 Sum_probs=49.3
Q ss_pred CCEEEEEcCCChhHHH--HHHHHHHcccc----C--C---C-C-----------c--------eeeecccccCCCHHHHH
Q psy7590 4 EKIILVTGGTGLVGKA--IEKIVKEEEKR----D--D---E-T-----------W--------IFVSSKEADLSNLESTQ 52 (358)
Q Consensus 4 ~~~VlItGatG~lG~~--l~~~L~~~g~~----~--~---~-~-----------~--------~~~~~~~~Dl~~~~~~~ 52 (358)
.|++||||+++-+|.+ +++.| +.|.. . . . + . ..+..+.+|+++++++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 4789999999999999 89999 88763 1 1 0 0 0 01234679999999888
Q ss_pred HHHhcc-----CCcEEEEccccc
Q psy7590 53 QLFSKY-----KPTHVIHLAAMV 70 (358)
Q Consensus 53 ~~~~~~-----~~d~Vih~a~~~ 70 (358)
++++.. ++|++||++|..
T Consensus 120 ~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHhcCCCCEEEECCccC
Confidence 777542 699999999975
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.015 Score=53.07 Aligned_cols=83 Identities=14% Similarity=0.143 Sum_probs=64.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 75 (358)
++|||.|||+- |+.|++.|.+.|++ .......+....+-+.+.+++.+.+.+.+++.||+..-+..
T Consensus 3 ~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA---- 77 (248)
T PRK08057 3 PRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGGPADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYA---- 77 (248)
T ss_pred ceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCCcccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccH----
Confidence 58999999874 89999999988874 11222344555677779999999999989999998855432
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhcCCC
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSYKQGVK 104 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~~~~v~ 104 (358)
...++++.++|++.+++
T Consensus 78 ------------~~is~~a~~ac~~~~ip 94 (248)
T PRK08057 78 ------------AQISANAAAACRALGIP 94 (248)
T ss_pred ------------HHHHHHHHHHHHHhCCc
Confidence 45677899999999986
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0026 Score=60.65 Aligned_cols=63 Identities=17% Similarity=0.246 Sum_probs=40.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHc-ccc-------CCCCceee--ecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEE-EKR-------DDETWIFV--SSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~-g~~-------~~~~~~~~--~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
.++|+||||+|++|+.++++|.+. +.+ ...+...+ ++..+++ .++.+++. ++|+|||+++...
T Consensus 155 ~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i---~~l~~~l~--~aDiVv~~ts~~~ 227 (340)
T PRK14982 155 KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI---LSLEEALP--EADIVVWVASMPK 227 (340)
T ss_pred CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH---HhHHHHHc--cCCEEEECCcCCc
Confidence 468999999999999999999864 321 11111111 1112333 24556776 5999999998754
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.016 Score=54.82 Aligned_cols=154 Identities=17% Similarity=0.117 Sum_probs=92.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCC------CceeeecccccCCC------------HHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDE------TWIFVSSKEADLSN------------LESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~------~~~~~~~~~~Dl~~------------~~~~~~~~~~~~~d~Vih~ 66 (358)
|||.|+|++|.+|++++..|...+.-... ..... ..|+.+ .+++.+.++ ++|+||-+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~---alDL~~~~~~~~i~~~~~~~~~y~~~~--daDivvit 75 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGV---AADLSHINTPAKVTGYLGPEELKKALK--GADVVVIP 75 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCcccee---ehHhHhCCCcceEEEecCCCchHHhcC--CCCEEEEe
Confidence 48999999999999999999877752111 11111 122211 122345566 59999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCE-EEEeeccceecCCCCCC---CccccccCCCCCCCCcchHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK-VVSCLSTCIFPDKTTYP---IDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r-~V~~SS~~vy~~~~~~~---~~E~~~~~~~~~p~~~~Y~~ 142 (358)
||... .....-.+..+.|..-.+.+.+...+++.+. +|.+|-.. +.. +++..+.. ...|.+...|.
T Consensus 76 aG~~~---k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPv------Dv~~~i~t~~~~~~-s~~p~~rviG~ 145 (310)
T cd01337 76 AGVPR---KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPV------NSTVPIAAEVLKKA-GVYDPKRLFGV 145 (310)
T ss_pred CCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch------hhHHHHHHHHHHHh-cCCCHHHEEee
Confidence 99753 2235677899999999999999999998663 44333211 000 01110000 11111113444
Q ss_pred HHHHHHHHHHHHHhhcCceEEEEecCcccCCC
Q psy7590 143 AKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 174 (358)
.-+..-++....++..|++...++ +.|+|.+
T Consensus 146 ~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH 176 (310)
T cd01337 146 TTLDVVRANTFVAELLGLDPAKVN-VPVIGGH 176 (310)
T ss_pred echHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence 445555666666777788777777 6788887
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0048 Score=54.11 Aligned_cols=64 Identities=23% Similarity=0.220 Sum_probs=46.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc----------eeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW----------IFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~----------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.++++|+||+|.+|+.+++.|.+.|++ ...+. ...+....|+.+.+++.+++. ++|+||++.
T Consensus 28 ~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~diVi~at 105 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK--GADVVFAAG 105 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh--cCCEEEECC
Confidence 368999999999999999999998863 11000 012233467788888888887 589999865
Q ss_pred cc
Q psy7590 68 AM 69 (358)
Q Consensus 68 ~~ 69 (358)
+.
T Consensus 106 ~~ 107 (194)
T cd01078 106 AA 107 (194)
T ss_pred CC
Confidence 53
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.014 Score=55.20 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=65.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccC-------CCCceeeeccccc-------------CCCHHHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRD-------DETWIFVSSKEAD-------------LSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~-------~~~~~~~~~~~~D-------------l~~~~~~~~~~~~~~~d~Vi 64 (358)
|||.|+|++|.+|.+++..|+..|+.. ..+.....-...| ++...+. +.+. ++|+||
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~--~aDiVi 77 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVA--GSDIVI 77 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhC--CCCEEE
Confidence 589999999999999999999987620 0000111000111 1111122 2355 599999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeec
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLS 111 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS 111 (358)
-+++... ....+..+..+.|+.-.+.+.+...+...+ .+|.+++
T Consensus 78 itag~p~---~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 78 ITAGVPR---KEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred EecCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 9988653 122344778899999999999998888644 4555554
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.013 Score=53.79 Aligned_cols=80 Identities=13% Similarity=0.196 Sum_probs=49.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc-------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR-------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~-------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 75 (358)
||||+|+|++|.+|+.+++.+.+.. .+ ........ ...++...+++.+++. ++|+||+++.+.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--~~~~i~~~~dl~~ll~--~~DvVid~t~p~----- 71 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--GALGVAITDDLEAVLA--DADVLIDFTTPE----- 71 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--CCCCccccCCHHHhcc--CCCEEEECCCHH-----
Confidence 3589999999999999999888652 21 11111000 1223334455666665 599999987432
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
....++..|.++|+. +|
T Consensus 72 --------------~~~~~~~~al~~G~~-vv 88 (257)
T PRK00048 72 --------------ATLENLEFALEHGKP-LV 88 (257)
T ss_pred --------------HHHHHHHHHHHcCCC-EE
Confidence 223466777777763 54
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.014 Score=55.76 Aligned_cols=29 Identities=34% Similarity=0.479 Sum_probs=25.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|++.++|.|.||||++|..|++.|.++.+
T Consensus 1 ~~~~~~vaIvGATG~vG~ellrlL~~~~h 29 (336)
T PRK08040 1 MSEGWNIALLGATGAVGEALLELLAERQF 29 (336)
T ss_pred CCCCCEEEEEccCCHHHHHHHHHHhcCCC
Confidence 77778999999999999999999998544
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.022 Score=51.79 Aligned_cols=26 Identities=23% Similarity=0.400 Sum_probs=23.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||||+|.|++|-.|+.|++.+.+.+.
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~ 27 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPD 27 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCC
Confidence 56999999999999999999997763
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.031 Score=51.11 Aligned_cols=83 Identities=18% Similarity=0.223 Sum_probs=63.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc---c---------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK---R---------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~---~---------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
|+|||.|||+- |+.|+..|.+.|+ . .......++...+-+.+.+.+.+.+.+.+++.||+..-+..
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPfA- 78 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGYVIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPFA- 78 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCCEEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCchH-
Confidence 58999999864 8889999999994 1 11122334555777779999999999889999998855432
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCC
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK 104 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~ 104 (358)
...++++.++|++.|++
T Consensus 79 ---------------~~is~na~~a~~~~~ip 95 (249)
T PF02571_consen 79 ---------------AEISQNAIEACRELGIP 95 (249)
T ss_pred ---------------HHHHHHHHHHHhhcCcc
Confidence 44677899999999986
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.03 Score=52.97 Aligned_cols=95 Identities=20% Similarity=0.229 Sum_probs=65.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCC------CCceeeecccccCCCH------------HHHHHHHhccCCcEEEEcc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDD------ETWIFVSSKEADLSNL------------ESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~------~~~~~~~~~~~Dl~~~------------~~~~~~~~~~~~d~Vih~a 67 (358)
||.|+|++|.+|++++..|...+.-.. ...... ..|+.+- +++.+.++ ++|+||-+|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~---a~DL~~~~~~~~i~~~~~~~~~~~~~~--daDivvita 75 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGV---AADLSHIPTAASVKGFSGEEGLENALK--GADVVVIPA 75 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEE---EchhhcCCcCceEEEecCCCchHHHcC--CCCEEEEeC
Confidence 689999999999999999988765210 111111 2222221 12345666 599999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEE
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~ 108 (358)
+... ....+..+....|..-.+.+.+...+++.+.+|.
T Consensus 76 G~~~---~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iii 113 (312)
T TIGR01772 76 GVPR---KPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMIL 113 (312)
T ss_pred CCCC---CCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEE
Confidence 9753 2235667789999999999999999998664443
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.025 Score=53.35 Aligned_cols=94 Identities=16% Similarity=0.132 Sum_probs=54.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CCCCcee---eecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DDETWIF---VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~~~~---~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|++|.|.||||.+|+.+++.|.++... .+.+..+ +++....+.-++...+.....++|++|.+++-.
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~~v~~~~~~~~~~~~~Divf~~ag~~--- 77 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSIGVPEDAADEFVFSDVDIVFFAAGGS--- 77 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccccCccccccccccccCCEEEEeCchH---
Confidence 468999999999999999999985321 1111111 222222233333323333222699999887642
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecC
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPD 117 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~ 117 (358)
.++.+...+.++|+ -+|--||..=+.+
T Consensus 78 ----------------~s~~~~p~~~~~G~-~VIdnsSa~Rm~~ 104 (334)
T COG0136 78 ----------------VSKEVEPKAAEAGC-VVIDNSSAFRMDP 104 (334)
T ss_pred ----------------HHHHHHHHHHHcCC-EEEeCCcccccCC
Confidence 23457788888885 3554444433333
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.029 Score=53.92 Aligned_cols=24 Identities=13% Similarity=0.339 Sum_probs=22.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g 28 (358)
+||+|+||||++|+.+++.|.++.
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p 26 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHP 26 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCC
Confidence 699999999999999999999763
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.07 Score=43.81 Aligned_cols=89 Identities=15% Similarity=0.183 Sum_probs=57.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------------------------------------CCCCceeeecccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------------------------------------DDETWIFVSSKEADL 45 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------------------------------------~~~~~~~~~~~~~Dl 45 (358)
++|+|.| .|-+|+.+++.|...|.. .......+..+..++
T Consensus 3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 5899999 699999999999999872 000011122233343
Q ss_pred CCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceec
Q psy7590 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116 (358)
Q Consensus 46 ~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~ 116 (358)
+.+...+.++ ++|+||.+... ......+.++|++.++ .+|+.++.+.+|
T Consensus 82 -~~~~~~~~~~--~~d~vi~~~d~------------------~~~~~~l~~~~~~~~~-p~i~~~~~g~~G 130 (135)
T PF00899_consen 82 -DEENIEELLK--DYDIVIDCVDS------------------LAARLLLNEICREYGI-PFIDAGVNGFYG 130 (135)
T ss_dssp -SHHHHHHHHH--TSSEEEEESSS------------------HHHHHHHHHHHHHTT--EEEEEEEETTEE
T ss_pred -cccccccccc--CCCEEEEecCC------------------HHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 4566677776 58999977332 2233357789999987 588888766554
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.029 Score=53.72 Aligned_cols=81 Identities=20% Similarity=0.215 Sum_probs=49.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc---------CCC-----CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR---------DDE-----TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~---------~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
+|+|+||||++|..|++.|.++++. ... .+...+....|+. ...+. ++|+||.+++..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~--~~D~v~~a~g~~- 72 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFE--GIDIALFSAGGS- 72 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhc--CCCEEEECCCHH-
Confidence 5899999999999999999987663 000 0111122233442 12344 599999876532
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
.+..++..+.+.|+ ++|=.|+..
T Consensus 73 ------------------~s~~~a~~~~~~G~-~VID~ss~~ 95 (339)
T TIGR01296 73 ------------------VSKEFAPKAAKCGA-IVIDNTSAF 95 (339)
T ss_pred ------------------HHHHHHHHHHHCCC-EEEECCHHH
Confidence 23335555666777 477666653
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.03 Score=53.70 Aligned_cols=26 Identities=19% Similarity=0.390 Sum_probs=23.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+||+|.||||++|..|++.|.+++|
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~h 32 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDF 32 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCC
Confidence 35899999999999999999998665
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.044 Score=52.87 Aligned_cols=26 Identities=27% Similarity=0.364 Sum_probs=22.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|++|.|+||||++|+.|++.|+++.+
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~ 26 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEEND 26 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCC
Confidence 35899999999999999997777643
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.021 Score=55.68 Aligned_cols=100 Identities=16% Similarity=0.129 Sum_probs=61.8
Q ss_pred CCCEEEEEcC----------------CChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHH-HHHHhc-c
Q psy7590 3 EEKIILVTGG----------------TGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLEST-QQLFSK-Y 58 (358)
Q Consensus 3 ~~~~VlItGa----------------tG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~-~~~~~~-~ 58 (358)
+.++|||||| ||.+|.+++++|..+|.+ .......-.....|+.+.+++ .++++. .
T Consensus 184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 263 (390)
T TIGR00521 184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPGVKSIKVSTAEEMLEAALNELA 263 (390)
T ss_pred CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCCcEEEEeccHHHHHHHHHHhhc
Confidence 3478999998 478999999999999984 111111111235788888888 545522 1
Q ss_pred -CCcEEEEcccccCCcccc--c---cchhhHHHHHHHHHHHHHHHHHhcC
Q psy7590 59 -KPTHVIHLAAMVGGLFHN--M---SHNLDFFRVNMKINDNVLDTSYKQG 102 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~~~--~---~~~~~~~~~nv~~~~~ll~aa~~~~ 102 (358)
++|++|++||........ . ......+..|+.-+..+|+..++..
T Consensus 264 ~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~ 313 (390)
T TIGR00521 264 KDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK 313 (390)
T ss_pred ccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence 589999999986521110 0 1111123355666667777776553
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.76 Score=45.83 Aligned_cols=87 Identities=22% Similarity=0.214 Sum_probs=56.3
Q ss_pred CCCEEEEEcCC---ChhHHHHHHHHHHccccCCCCceeeeccc---ccCCCHHHHHHHHhccCCcEEEEcccccCCcccc
Q psy7590 3 EEKIILVTGGT---GLVGKAIEKIVKEEEKRDDETWIFVSSKE---ADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN 76 (358)
Q Consensus 3 ~~~~VlItGat---G~lG~~l~~~L~~~g~~~~~~~~~~~~~~---~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 76 (358)
+.++|+|.|+| |-+|..+++.|++.|+.. ....+.... ..+.-..++.++-. .+|.++-+..
T Consensus 6 ~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g--~v~~Vnp~~~~i~G~~~~~sl~~lp~--~~Dlavi~vp-------- 73 (447)
T TIGR02717 6 NPKSVAVIGASRDPGKVGYAIMKNLIEGGYKG--KIYPVNPKAGEILGVKAYPSVLEIPD--PVDLAVIVVP-------- 73 (447)
T ss_pred CCCEEEEEccCCCCCchHHHHHHHHHhCCCCC--cEEEECCCCCccCCccccCCHHHCCC--CCCEEEEecC--------
Confidence 45789999998 778999999999988731 111121111 12223344555544 5888774422
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 77 MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 77 ~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
-..+..+++.|.+.|++.+|.+|+.
T Consensus 74 -----------~~~~~~~l~e~~~~gv~~~vi~s~g 98 (447)
T TIGR02717 74 -----------AKYVPQVVEECGEKGVKGAVVITAG 98 (447)
T ss_pred -----------HHHHHHHHHHHHhcCCCEEEEECCC
Confidence 2244568888999999989888775
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.096 Score=46.17 Aligned_cols=24 Identities=21% Similarity=0.285 Sum_probs=21.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.|++| +|+++++.|...|.
T Consensus 20 s~VlviG~gg-lGsevak~L~~~GV 43 (198)
T cd01485 20 AKVLIIGAGA-LGAEIAKNLVLAGI 43 (198)
T ss_pred CcEEEECCCH-HHHHHHHHHHHcCC
Confidence 4899999877 99999999999987
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.075 Score=52.60 Aligned_cols=155 Identities=12% Similarity=0.032 Sum_probs=94.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHc---cccCCCCceeeecccccC--------------CCHH-----------HHHHH
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEE---EKRDDETWIFVSSKEADL--------------SNLE-----------STQQL 54 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~---g~~~~~~~~~~~~~~~Dl--------------~~~~-----------~~~~~ 54 (358)
+.-+|+||||+|.+|.+|+-.+..- |.. ..+..+-.|+ .|.. ...++
T Consensus 122 ~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~-----~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~~~~ea 196 (452)
T cd05295 122 NPLQVCITNASAPLCYHLIPSLASGEVFGME-----EEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTTDLDVA 196 (452)
T ss_pred CceEEEEecCcHHHHHHHHHHHhCCcccCCC-----CeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEECCHHH
Confidence 3448999999999999999998863 211 1111112222 1111 11244
Q ss_pred HhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC--CEEEEeeccceecCCCCCCCccccc---c
Q psy7590 55 FSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV--KKVVSCLSTCIFPDKTTYPIDETMV---H 129 (358)
Q Consensus 55 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--~r~V~~SS~~vy~~~~~~~~~E~~~---~ 129 (358)
++ ++|+||-+|+... ..-.+-.+..+.|..-.+.+.++..+... .+++.+.|- |.+-... .
T Consensus 197 ~~--daDvvIitag~pr---k~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tN---------PvD~~t~i~~k 262 (452)
T cd05295 197 FK--DAHVIVLLDDFLI---KEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRT---------FLNLKTSILIK 262 (452)
T ss_pred hC--CCCEEEECCCCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCC---------cHHHHHHHHHH
Confidence 44 6999999999753 22346678999999999999999998875 567766642 1111000 0
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
..+--|.+...|.+....-++....+++.|++...|+-..|.|.+..
T Consensus 263 ~apgiP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~ 309 (452)
T cd05295 263 YAPSIPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG 309 (452)
T ss_pred HcCCCCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence 00111212245555566555666667777888888877788887654
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.089 Score=47.62 Aligned_cols=87 Identities=14% Similarity=0.122 Sum_probs=62.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
||+|+|.|||+- ++.|++.|...+.. ..........+.+-..+.+.+.+.+++.++|.||+..-+..
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g~~l~~~~~~~~~~G~l~~e~l~~~l~e~~i~llIDATHPyA-- 78 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYGAKLAEQIGPVRVGGFLGAEGLAAFLREEGIDLLIDATHPYA-- 78 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCccEEEEEcccccccchhccCCeeecCcCCHHHHHHHHHHcCCCEEEECCChHH--
Confidence 468999999875 78899999888631 11111222234556678999999999999999998744321
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
...+.|.+++|+..|++-+.
T Consensus 79 --------------a~iS~Na~~aake~gipy~r 98 (257)
T COG2099 79 --------------ARISQNAARAAKETGIPYLR 98 (257)
T ss_pred --------------HHHHHHHHHHHHHhCCcEEE
Confidence 45678899999999987554
|
|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.62 Score=43.47 Aligned_cols=86 Identities=12% Similarity=0.105 Sum_probs=56.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecc--c---ccCCCHHHHHHHHhccCCcEEEEcccccCCccccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSK--E---ADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSH 79 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~--~---~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~ 79 (358)
.+|||-|.||.+|+.+.+.|+.-|.. ....++.- . ..+.-..++.++-+..++|.++-+...
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~g~~---~v~~V~p~~~~~~v~G~~~y~sv~dlp~~~~~Dlavi~vpa---------- 73 (286)
T TIGR01019 7 TKVIVQGITGSQGSFHTEQMLAYGTN---IVGGVTPGKGGTTVLGLPVFDSVKEAVEETGANASVIFVPA---------- 73 (286)
T ss_pred CcEEEecCCcHHHHHHHHHHHhCCCC---EEEEECCCCCcceecCeeccCCHHHHhhccCCCEEEEecCH----------
Confidence 48999999999999999999887753 11222211 1 123344566666663237887755332
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 80 NLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 80 ~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
..+..+++.|.+.|++.+|.+|+.
T Consensus 74 ---------~~v~~~l~e~~~~Gvk~avIis~G 97 (286)
T TIGR01019 74 ---------PFAADAIFEAIDAGIELIVCITEG 97 (286)
T ss_pred ---------HHHHHHHHHHHHCCCCEEEEECCC
Confidence 133457788888999988877764
|
ATP citrate lyases appear to form an outgroup. |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.11 Score=48.93 Aligned_cols=152 Identities=18% Similarity=0.174 Sum_probs=87.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeee-----cccccCCCHHHH------------HHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVS-----SKEADLSNLEST------------QQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~-----~~~~Dl~~~~~~------------~~~~~~~~~d~Vih~a 67 (358)
+||.|+|+ |.+|+.++-.|+.++......+..+. -...|+.+.... -+.++ ++|+|+-+|
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~--~aDiVvitA 77 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLK--GADIVVITA 77 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhc--CCCEEEEeC
Confidence 48999999 99999999999877652111111110 012222211111 23455 589999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccc----cCCCCCCCCcchHHH
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMV----HNGPPHPSNFGYSHA 143 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~----~~~~~~p~~~~Y~~s 143 (358)
|... ..-..-.+.++.|..-.+.+.+...+.+.+-++.+-|- |++--.+ ....++. ...-+.+
T Consensus 78 G~pr---KpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtN---------PvD~~ty~~~k~sg~p~~-rvig~gt 144 (313)
T COG0039 78 GVPR---KPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTN---------PVDILTYIAMKFSGFPKN-RVIGSGT 144 (313)
T ss_pred CCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecC---------cHHHHHHHHHHhcCCCcc-ceecccc
Confidence 8753 22246678999999999999999999987655544432 2221110 0001111 1133445
Q ss_pred HHHHHHHHHHHHhhcCceEEEEecCcccCC
Q psy7590 144 KRMLDVLNKAYYQQHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 144 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~ 173 (358)
.+..-++-...++..+++...++. .|.|.
T Consensus 145 ~LDsaR~~~~lae~~~v~~~~V~~-~ViGe 173 (313)
T COG0039 145 VLDSARFRTFLAEKLGVSPKDVHA-YVIGE 173 (313)
T ss_pred hHHHHHHHHHHHHHhCCChhHcee-eEecc
Confidence 555556656666666766555554 34453
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.14 Score=49.08 Aligned_cols=24 Identities=25% Similarity=0.458 Sum_probs=22.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|+|+ |.+|++++..|...|.
T Consensus 25 ~~VlVvG~-GglGs~va~~La~aGv 48 (339)
T PRK07688 25 KHVLIIGA-GALGTANAEMLVRAGV 48 (339)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC
Confidence 58999995 9999999999999987
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.064 Score=51.57 Aligned_cols=87 Identities=11% Similarity=0.164 Sum_probs=50.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-c-----CCCC--ceee----e---cc-cccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-R-----DDET--WIFV----S---SK-EADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-~-----~~~~--~~~~----~---~~-~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
|+|+|+||||++|..+++.|.++.. + .+.+ ...+ . .. ..++.+ .+..+++. ++|+||-|..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~-~~~~~~~~--~~DvVf~alP 77 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEP-IDEEEIAE--DADVVFLALP 77 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeec-CCHHHhhc--CCCEEEECCC
Confidence 4899999999999999999997632 1 1111 0000 0 00 111221 12233433 5999996643
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccce
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCI 114 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~v 114 (358)
.. ....++..+.++|+ ++|=.|+..=
T Consensus 78 ~~-------------------~s~~~~~~~~~~G~-~VIDlS~~fR 103 (346)
T TIGR01850 78 HG-------------------VSAELAPELLAAGV-KVIDLSADFR 103 (346)
T ss_pred ch-------------------HHHHHHHHHHhCCC-EEEeCChhhh
Confidence 21 34456677777785 7998888743
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.13 Score=45.27 Aligned_cols=24 Identities=29% Similarity=0.311 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.|++| +|+++++.|...|.
T Consensus 22 s~VlIiG~gg-lG~evak~La~~GV 45 (197)
T cd01492 22 ARILLIGLKG-LGAEIAKNLVLSGI 45 (197)
T ss_pred CcEEEEcCCH-HHHHHHHHHHHcCC
Confidence 5899999766 99999999999987
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.18 Score=45.37 Aligned_cols=89 Identities=16% Similarity=0.152 Sum_probs=56.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------------CC---------------------------CCceeeecccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------------DD---------------------------ETWIFVSSKEADL 45 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------------~~---------------------------~~~~~~~~~~~Dl 45 (358)
.+|+|.| .|-+|+++++.|...|.. .+ .....++.+..++
T Consensus 22 ~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i 100 (228)
T cd00757 22 ARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL 100 (228)
T ss_pred CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee
Confidence 5899999 799999999999999872 00 0011222223333
Q ss_pred CCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceec
Q psy7590 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116 (358)
Q Consensus 46 ~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~ 116 (358)
+.+.+.+.+. ++|+||.|.... ..-..+.++|.+.++ .+|+.+..+.+|
T Consensus 101 -~~~~~~~~~~--~~DvVi~~~d~~------------------~~r~~l~~~~~~~~i-p~i~~g~~g~~g 149 (228)
T cd00757 101 -DAENAEELIA--GYDLVLDCTDNF------------------ATRYLINDACVKLGK-PLVSGAVLGFEG 149 (228)
T ss_pred -CHHHHHHHHh--CCCEEEEcCCCH------------------HHHHHHHHHHHHcCC-CEEEEEeccCEE
Confidence 3455666666 489988764321 122347788999987 488887666544
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.22 Score=47.30 Aligned_cols=107 Identities=15% Similarity=0.104 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc-c------CCCCce--ee------ecc--cccCCCHHHHHHHHhccCCcEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK-R------DDETWI--FV------SSK--EADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~-~------~~~~~~--~~------~~~--~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
|.+++||.|+| +|.+|+.++..++..|. . ...... .. ... ...+....+. +.+. ++|+|
T Consensus 3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~--~aDiV 78 (321)
T PTZ00082 3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNY-EDIA--GSDVV 78 (321)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCH-HHhC--CCCEE
Confidence 56677999999 59999999999888775 1 000000 00 000 0001100122 3455 69999
Q ss_pred EEcccccCCccc--cccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeec
Q psy7590 64 IHLAAMVGGLFH--NMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLS 111 (358)
Q Consensus 64 ih~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS 111 (358)
|.+++....... ...+..+....|+...+.+.+.+.+...+ .+|.+|-
T Consensus 79 I~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 79 IVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred EECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999987542111 00144667888999999999999998866 5665553
|
|
| >KOG1494|consensus | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.12 Score=47.52 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=69.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceee---ecccccC------------CCHHHHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV---SSKEADL------------SNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~---~~~~~Dl------------~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
+-||.|+||.|-||+-|.-.|+-...-+...+..+ +-+.+|+ +-++.++++++ ++|+|+-=||
T Consensus 28 ~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~--~advVvIPAG 105 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALK--GADVVVIPAG 105 (345)
T ss_pred cceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhc--CCCEEEecCC
Confidence 35899999999999999877765443211111111 1123333 35678999999 5999998888
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
... ..--.-++++.+|-.-.+.|..++.+.-.+..|.+
T Consensus 106 VPR---KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~v 143 (345)
T KOG1494|consen 106 VPR---KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILV 143 (345)
T ss_pred CCC---CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEe
Confidence 643 22234567899999999999999999876645443
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.2 Score=48.03 Aligned_cols=90 Identities=16% Similarity=0.170 Sum_probs=56.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----CCC------------------------------------Cceeeecccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----DDE------------------------------------TWIFVSSKEA 43 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~~~------------------------------------~~~~~~~~~~ 43 (358)
++|+|+|+ |-+|++++..|...|.. +.+ ....++.+..
T Consensus 25 ~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~ 103 (338)
T PRK12475 25 KHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVT 103 (338)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEec
Confidence 58999995 77999999999999872 000 0111222334
Q ss_pred cCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecC
Q psy7590 44 DLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPD 117 (358)
Q Consensus 44 Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~ 117 (358)
|++ ++.+.++++ ++|+||.+... ...-..+-++|.+.+++ +|+.+..+.+|.
T Consensus 104 ~~~-~~~~~~~~~--~~DlVid~~D~------------------~~~r~~in~~~~~~~ip-~i~~~~~g~~G~ 155 (338)
T PRK12475 104 DVT-VEELEELVK--EVDLIIDATDN------------------FDTRLLINDLSQKYNIP-WIYGGCVGSYGV 155 (338)
T ss_pred cCC-HHHHHHHhc--CCCEEEEcCCC------------------HHHHHHHHHHHHHcCCC-EEEEEecccEEE
Confidence 443 445666666 47888866321 11122366888888885 888887766653
|
|
| >KOG4022|consensus | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.78 Score=38.84 Aligned_cols=141 Identities=16% Similarity=0.157 Sum_probs=76.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-------CCCCceeeecccccCCC-------HHHHHHHHhccCCcEEEEccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-------DDETWIFVSSKEADLSN-------LESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~~~~~~~~~~Dl~~-------~~~~~~~~~~~~~d~Vih~a~ 68 (358)
+-.+|+|-||-|-+|+++++.+.+++|- .++....--.+.+|-.- .+.+.+.+.+.++|.||..|+
T Consensus 2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CVAG 81 (236)
T KOG4022|consen 2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAG 81 (236)
T ss_pred CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccccceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEeec
Confidence 3468999999999999999999999872 11111000011222221 123445555568999999887
Q ss_pred ccCCcccccc------chhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccc-eecCCCCCCCccccccCCCCCCCCcch
Q psy7590 69 MVGGLFHNMS------HNLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 69 ~~~~~~~~~~------~~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
-... .+.. +.+.+++..+-...--...+.++ +..-++.+.... .. ...|.-..|
T Consensus 82 GWAG--GnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl----------------~gTPgMIGY 143 (236)
T KOG4022|consen 82 GWAG--GNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAAL----------------GGTPGMIGY 143 (236)
T ss_pred cccC--CCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccccccc----------------CCCCcccch
Confidence 5321 1222 23334443332221112222221 122344333331 11 222334489
Q ss_pred HHHHHHHHHHHHHHHhh-cCce
Q psy7590 141 SHAKRMLDVLNKAYYQQ-HGVT 161 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~-~g~~ 161 (358)
|..|...-++....+.+ +|++
T Consensus 144 GMAKaAVHqLt~SLaak~SGlP 165 (236)
T KOG4022|consen 144 GMAKAAVHQLTSSLAAKDSGLP 165 (236)
T ss_pred hHHHHHHHHHHHHhcccccCCC
Confidence 99999999999887655 4554
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.42 Score=46.57 Aligned_cols=156 Identities=13% Similarity=0.119 Sum_probs=90.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecc------------cccCCCHH-----------HHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSK------------EADLSNLE-----------STQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~------------~~Dl~~~~-----------~~~~~~~~~~~d 61 (358)
-||.|+|++|.+|.+++-.|...+.-....-..+..+ ..|+.|.. .-.+.++ ++|
T Consensus 45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~k--daD 122 (387)
T TIGR01757 45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEVFE--DAD 122 (387)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHHhC--CCC
Confidence 3899999999999999999998765221000111001 11111111 0013333 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CC-EEEEeeccceecCCCCCCCccccc----cCCCCCC
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VK-KVVSCLSTCIFPDKTTYPIDETMV----HNGPPHP 135 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~-r~V~~SS~~vy~~~~~~~~~E~~~----~~~~~~p 135 (358)
+||-+|+... ....+-.+..+.|+...+.+.+...++. .. .+|.+|-. +|--.. ..+.+..
T Consensus 123 IVVitAG~pr---kpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNP----------vDv~t~v~~k~sg~~~~ 189 (387)
T TIGR01757 123 WALLIGAKPR---GPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNP----------CNTNALIAMKNAPNIPR 189 (387)
T ss_pred EEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc----------HHHHHHHHHHHcCCCcc
Confidence 9999999753 2235677899999999999999999954 44 35544421 111000 0001111
Q ss_pred CCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
.. .=+.+.+..-++....+++.+++...++-..|.|.+..
T Consensus 190 rv-iG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd 229 (387)
T TIGR01757 190 KN-FHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST 229 (387)
T ss_pred cE-EEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC
Confidence 11 22444555556666666777877777766677887653
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.29 Score=48.50 Aligned_cols=160 Identities=13% Similarity=0.094 Sum_probs=90.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccC---CC--Cceeee-------cccccCCCHH-----------HHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRD---DE--TWIFVS-------SKEADLSNLE-----------STQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~---~~--~~~~~~-------~~~~Dl~~~~-----------~~~~~~~~~~~d 61 (358)
-||.|+|++|.+|.+++-.|...+.-. .. .+..++ -...|+.|.. .--+.++ ++|
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~k--daD 178 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQ--DAE 178 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhC--cCC
Confidence 389999999999999999998772100 00 000000 0011111111 0113444 599
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHh-cCCC-EEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYK-QGVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~-~~v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
+||-+||... ....+-.+..+.|+...+.+.+...+ ++.+ .+|.+|-..-. .....-+.. +.+.... .
T Consensus 179 iVVitAG~pr---kpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv---~t~v~~k~s---g~~~~rV-i 248 (444)
T PLN00112 179 WALLIGAKPR---GPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNT---NALICLKNA---PNIPAKN-F 248 (444)
T ss_pred EEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHH---HHHHHHHHc---CCCCcce-E
Confidence 9999999753 22356778999999999999999999 5654 34444421100 000000111 0111122 2
Q ss_pred hHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
=..+.+..-++-...+++.+++...+.-..|.|.+..
T Consensus 249 GtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd 285 (444)
T PLN00112 249 HALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST 285 (444)
T ss_pred EeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC
Confidence 3344455555555666777888888877778888754
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.021 Score=54.96 Aligned_cols=28 Identities=21% Similarity=0.395 Sum_probs=24.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|| |+||+|+||||++|+.|++.|.++..
T Consensus 1 ~~-~~~V~I~GatG~iG~~l~~~L~~~p~ 28 (349)
T PRK08664 1 MM-KLKVGILGATGMVGQRFVQLLANHPW 28 (349)
T ss_pred CC-CcEEEEECCCCHHHHHHHHHHHcCCC
Confidence 55 47999999999999999999997643
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.12 Score=48.88 Aligned_cols=81 Identities=11% Similarity=0.183 Sum_probs=48.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-ccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-KEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDF 83 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~ 83 (358)
++|.|.||||++|..|++.|.++.+ .....+.. ...++.+ ....+. ++|+||-+... +
T Consensus 3 ~~VaIvGAtGy~G~eLlrlL~~hp~---~~l~~~~s~~~~~~~~---~~~~~~--~~DvvFlalp~-~------------ 61 (313)
T PRK11863 3 PKVFIDGEAGTTGLQIRERLAGRSD---IELLSIPEAKRKDAAA---RRELLN--AADVAILCLPD-D------------ 61 (313)
T ss_pred cEEEEECCCCHHHHHHHHHHhcCCC---eEEEEEecCCCCcccC---chhhhc--CCCEEEECCCH-H------------
Confidence 5999999999999999999998753 11111110 0112211 223344 58999865321 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 84 FRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 84 ~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
....+...+.+.|+ ++|=.|+..
T Consensus 62 ------~s~~~~~~~~~~g~-~VIDlSadf 84 (313)
T PRK11863 62 ------AAREAVALIDNPAT-RVIDASTAH 84 (313)
T ss_pred ------HHHHHHHHHHhCCC-EEEECChhh
Confidence 23335555666777 588888775
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.2 Score=41.49 Aligned_cols=23 Identities=22% Similarity=0.263 Sum_probs=21.1
Q ss_pred EEEEEcCCChhHHHHHHHHHHccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+|+|.|+ |-+|+++++.|...|.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv 23 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV 23 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC
Confidence 5899995 9999999999999987
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >KOG2018|consensus | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.16 Score=47.19 Aligned_cols=22 Identities=23% Similarity=0.431 Sum_probs=19.5
Q ss_pred EEEEcCCChhHHHHHHHHHHccc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|+|+| .|-+|+|++..|+..|.
T Consensus 77 VVVVG-~GgVGSwv~nmL~RSG~ 98 (430)
T KOG2018|consen 77 VVVVG-AGGVGSWVANMLLRSGV 98 (430)
T ss_pred EEEEe-cCchhHHHHHHHHHhcC
Confidence 67777 58899999999999997
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.094 Score=49.66 Aligned_cols=26 Identities=12% Similarity=0.281 Sum_probs=23.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|+||.|.||+|+.|..|++.|..+..
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ 27 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPD 27 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCC
Confidence 46999999999999999999998865
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.052 Score=47.29 Aligned_cols=66 Identities=18% Similarity=0.206 Sum_probs=38.5
Q ss_pred CCEEEEEcC----------------CChhHHHHHHHHHHcccc-----CCCC---ceeeecccccCCCHHHHHHHHhcc-
Q psy7590 4 EKIILVTGG----------------TGLVGKAIEKIVKEEEKR-----DDET---WIFVSSKEADLSNLESTQQLFSKY- 58 (358)
Q Consensus 4 ~~~VlItGa----------------tG~lG~~l~~~L~~~g~~-----~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~- 58 (358)
.++||||+| ||..|.+|++++...|++ .+.. ...++. .++.+.+++.+++...
T Consensus 3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p~~~~~--i~v~sa~em~~~~~~~~ 80 (185)
T PF04127_consen 3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPPPGVKV--IRVESAEEMLEAVKELL 80 (185)
T ss_dssp T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----TTEEE--EE-SSHHHHHHHHHHHG
T ss_pred CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccccccceE--EEecchhhhhhhhcccc
Confidence 468888864 789999999999999984 1111 112222 3345555555555431
Q ss_pred -CCcEEEEcccccC
Q psy7590 59 -KPTHVIHLAAMVG 71 (358)
Q Consensus 59 -~~d~Vih~a~~~~ 71 (358)
++|++||+||+.+
T Consensus 81 ~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 81 PSADIIIMAAAVSD 94 (185)
T ss_dssp GGGSEEEE-SB--S
T ss_pred CcceeEEEecchhh
Confidence 4799999999875
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.064 Score=58.34 Aligned_cols=63 Identities=19% Similarity=0.192 Sum_probs=45.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc-c----------------CCC----------CceeeecccccCCCHHHHHHHHh
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK-R----------------DDE----------TWIFVSSKEADLSNLESTQQLFS 56 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~-~----------------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~ 56 (358)
|++|+|+|+ |++|+.+++.|.+... . ... ....+..+..|+.|.+++.++++
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 679999995 9999999999987531 0 000 01123345788999999999888
Q ss_pred ccCCcEEEEcccc
Q psy7590 57 KYKPTHVIHLAAM 69 (358)
Q Consensus 57 ~~~~d~Vih~a~~ 69 (358)
++|+||.+...
T Consensus 648 --~~DaVIsalP~ 658 (1042)
T PLN02819 648 --QVDVVISLLPA 658 (1042)
T ss_pred --CCCEEEECCCc
Confidence 49999988554
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.14 Score=48.32 Aligned_cols=152 Identities=16% Similarity=0.126 Sum_probs=85.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc--------CCCCceeeecccccCCCH------------HHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR--------DDETWIFVSSKEADLSNL------------ESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~--------~~~~~~~~~~~~~Dl~~~------------~~~~~~~~~~~~d~Vi 64 (358)
+||.|+|+ |.+|+.++..|+..|.. ........ ..|+.+. ... +.+. ++|+||
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~---a~dL~~~~~~~~~~~~i~~~~~-~~l~--~aDIVI 73 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGE---ALDLEDALAFLPSPVKIKAGDY-SDCK--DADIVV 73 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHh---HhhHHHHhhccCCCeEEEcCCH-HHhC--CCCEEE
Confidence 38999995 99999999999988741 11111100 1111000 111 2234 699999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCE-EEEeeccceecCCCCCCCccccccCCCCCCCCcchHH-
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK-VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH- 142 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r-~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~- 142 (358)
.+++... ....+..+..+.|..-.+.+.+.+++++.+. +|.+|-.. ..+..-........+.. ..|.
T Consensus 74 itag~~~---~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~-------d~~~~~~~~~~g~p~~~-v~g~g 142 (306)
T cd05291 74 ITAGAPQ---KPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPV-------DVITYVVQKLSGLPKNR-VIGTG 142 (306)
T ss_pred EccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChH-------HHHHHHHHHHhCcCHHH-Eeecc
Confidence 9998753 2234567889999999999999999988653 44333210 00000000000111111 2333
Q ss_pred HHHHHHHHHHHHHhhcCceEEEEecCcccCCCC
Q psy7590 143 AKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
+-+..-++....+++.+++...++. .|+|.+.
T Consensus 143 t~LDs~R~~~~la~~l~v~~~~v~~-~V~G~Hg 174 (306)
T cd05291 143 TSLDTARLRRALAEKLNVDPRSVHA-YVLGEHG 174 (306)
T ss_pred chHHHHHHHHHHHHHHCCCcccceE-EEEecCC
Confidence 2233444444555667887777775 6888764
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.2 Score=45.13 Aligned_cols=59 Identities=17% Similarity=0.262 Sum_probs=45.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C-------CCCceeeecccccCCCHHHHHHH-HhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D-------DETWIFVSSKEADLSNLESTQQL-FSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~-------~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~ 66 (358)
|+++|.| .|.+|.++++.|.+.|+. . .........+.+|-++++.+.++ +. .+|+++=+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~--~aD~vva~ 73 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGID--DADAVVAA 73 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCC--cCCEEEEe
Confidence 5899999 699999999999999983 1 11124455668999999999988 45 58999843
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=94.55 E-value=0.85 Score=46.43 Aligned_cols=150 Identities=19% Similarity=0.202 Sum_probs=84.5
Q ss_pred EEEEEcCC-ChhHHHHHHHHHHcccc-------------------------CCCCceeeecccccCCCHHHHHHHHhc--
Q psy7590 6 IILVTGGT-GLVGKAIEKIVKEEEKR-------------------------DDETWIFVSSKEADLSNLESTQQLFSK-- 57 (358)
Q Consensus 6 ~VlItGat-G~lG~~l~~~L~~~g~~-------------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~-- 57 (358)
-.|||||+ |-||..++..|+..|-. ....+..+..=.+..+|.+++.+.+-+
T Consensus 398 valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq 477 (866)
T COG4982 398 VALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQ 477 (866)
T ss_pred eEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhcccc
Confidence 47999997 99999999999998862 222333342223334444444444422
Q ss_pred --------------cCCcEEEEcccccC-Cccccccc-hhhHHHHHHHHHHHHHHHHHhcC----CC---EEEEeecc--
Q psy7590 58 --------------YKPTHVIHLAAMVG-GLFHNMSH-NLDFFRVNMKINDNVLDTSYKQG----VK---KVVSCLST-- 112 (358)
Q Consensus 58 --------------~~~d~Vih~a~~~~-~~~~~~~~-~~~~~~~nv~~~~~ll~aa~~~~----v~---r~V~~SS~-- 112 (358)
..+|.+|-+|++.- +....... .+...++=+-...+++-..+..+ +. ++|.-.|.
T Consensus 478 ~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSPNr 557 (866)
T COG4982 478 TETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSPNR 557 (866)
T ss_pred ccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCCCC
Confidence 13678888888632 11112122 22233333444455555555443 21 45655554
Q ss_pred ceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcC----ceEEEEecCcccCCC
Q psy7590 113 CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHG----VTYTSVIPCNVFGPH 174 (358)
Q Consensus 113 ~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g----~~~~ilRp~~v~G~~ 174 (358)
+.||.+. .|+.+|...|.++..+...++ +..|--+.+++=|-+
T Consensus 558 G~FGgDG-------------------aYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTG 604 (866)
T COG4982 558 GMFGGDG-------------------AYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTG 604 (866)
T ss_pred CccCCCc-------------------chhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccc
Confidence 3444332 799999999999988866652 223333455544433
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.37 Score=42.55 Aligned_cols=89 Identities=16% Similarity=0.172 Sum_probs=55.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----CCC----------------------------------CceeeecccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----DDE----------------------------------TWIFVSSKEADL 45 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~~~----------------------------------~~~~~~~~~~Dl 45 (358)
.+|+|.| .|-+|+++++.|...|.. +.. ....++.+...+
T Consensus 22 ~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i 100 (202)
T TIGR02356 22 SHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV 100 (202)
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC
Confidence 4899999 799999999999999862 000 001111112222
Q ss_pred CCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceec
Q psy7590 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116 (358)
Q Consensus 46 ~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~ 116 (358)
+.+.+.+.++ ++|+||.+... ...-..+.++|.+.+++ +|+.++.+.+|
T Consensus 101 -~~~~~~~~~~--~~D~Vi~~~d~------------------~~~r~~l~~~~~~~~ip-~i~~~~~g~~G 149 (202)
T TIGR02356 101 -TAENLELLIN--NVDLVLDCTDN------------------FATRYLINDACVALGTP-LISAAVVGFGG 149 (202)
T ss_pred -CHHHHHHHHh--CCCEEEECCCC------------------HHHHHHHHHHHHHcCCC-EEEEEeccCeE
Confidence 3345566666 58888876322 12223477889999874 88887766554
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.24 Score=47.59 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=63.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceee-----ecccccCCCHH------------HHHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV-----SSKEADLSNLE------------STQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~-----~~~~~Dl~~~~------------~~~~~~~~~~~d~Vih~a 67 (358)
+||.|+|+ |.+|++++..|+..+......+..+ .-...|+.+.. +. +.++ ++|+||-+|
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy-~~~~--daDiVVitA 113 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDY-AVTA--GSDLCIVTA 113 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCH-HHhC--CCCEEEECC
Confidence 59999995 9999999999998765211111110 00011221111 11 1244 699999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+... ....+-.+....|+.-.+.+.+...+++.+ .+|.+|
T Consensus 114 G~~~---k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 114 GARQ---IPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred CCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 9753 122456688999999999999999998765 344333
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.46 Score=45.00 Aligned_cols=155 Identities=15% Similarity=0.098 Sum_probs=83.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceee-----ecccccCCCH------------HHHHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV-----SSKEADLSNL------------ESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~-----~~~~~Dl~~~------------~~~~~~~~~~~~d~Vih~a 67 (358)
+||.|+|+ |.+|+.++..|+..+......+..+ .-...|+.+. .+.+ .++ ++|+||-+|
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~-~~~--~adivvita 79 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS-VTA--NSKVVIVTA 79 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH-HhC--CCCEEEECC
Confidence 58999996 9999999999987765210000000 0000111110 1122 244 699999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH-HHH
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH-AKR 145 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~-sK~ 145 (358)
+... ....+-.+.++.|..-.+.+.+.+.+.+.+ .+|.+|-.. ..+..--.......+.. ..|. +-+
T Consensus 80 G~~~---k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~-------d~~t~~~~k~sg~p~~~-viG~gt~L 148 (312)
T cd05293 80 GARQ---NEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPV-------DIMTYVAWKLSGLPKHR-VIGSGCNL 148 (312)
T ss_pred CCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChH-------HHHHHHHHHHhCCCHHH-EEecCchH
Confidence 8753 223456678999999999999999999855 344444210 00000000000011111 2333 333
Q ss_pred HHHHHHHHHHhhcCceEEEEecCcccCCCC
Q psy7590 146 MLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 146 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
..-++-...++..+++..-++. .|+|.+.
T Consensus 149 d~~R~~~~la~~l~v~~~~v~~-~v~GeHG 177 (312)
T cd05293 149 DSARFRYLIAERLGVAPSSVHG-WIIGEHG 177 (312)
T ss_pred HHHHHHHHHHHHhCCChhhEEE-EEeecCC
Confidence 3444555555666777666665 4567764
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.1 Score=50.27 Aligned_cols=23 Identities=30% Similarity=0.481 Sum_probs=20.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~ 27 (358)
|+|.|+||||.+|+.+++.|.++
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e 23 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEE 23 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhC
Confidence 48999999999999999999954
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=94.39 E-value=0.19 Score=47.25 Aligned_cols=82 Identities=7% Similarity=0.152 Sum_probs=49.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFF 84 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 84 (358)
.||.|.||||+.|..|++.|..+.+ .....+.... . .++.+..++++ ++|+||-+... +
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~---~el~~l~s~~-~-~~~~~~~~~~~--~~D~vFlalp~-~------------- 60 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDD---IELLSIAPDR-R-KDAAERAKLLN--AADVAILCLPD-D------------- 60 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCC---eEEEEEeccc-c-cCcCCHhHhhc--CCCEEEECCCH-H-------------
Confidence 3899999999999999999998743 2222221000 0 11122334445 58998865321 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 85 RVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 85 ~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
....++..+.+.|+ ++|=.|+..
T Consensus 61 -----~s~~~~~~~~~~g~-~VIDlSadf 83 (310)
T TIGR01851 61 -----AAREAVSLVDNPNT-CIIDASTAY 83 (310)
T ss_pred -----HHHHHHHHHHhCCC-EEEECChHH
Confidence 22345555666777 588888764
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.38 Score=43.34 Aligned_cols=89 Identities=17% Similarity=0.084 Sum_probs=59.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc---------------------------------------CCCCceeeecccccCC
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR---------------------------------------DDETWIFVSSKEADLS 46 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~---------------------------------------~~~~~~~~~~~~~Dl~ 46 (358)
+|+|+| -|-+|+|.+..|...|.. .-..+..+. ..-|+-
T Consensus 32 ~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~-~~~~f~ 109 (263)
T COG1179 32 HVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVT-AINDFI 109 (263)
T ss_pred cEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEe-ehHhhh
Confidence 799999 577999999999999872 000111110 123555
Q ss_pred CHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCC
Q psy7590 47 NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDK 118 (358)
Q Consensus 47 ~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~ 118 (358)
.++.+.+++.. ++|+||++.-. +..-..|+..|++++++ || ||.++-+..
T Consensus 110 t~en~~~~~~~-~~DyvIDaiD~------------------v~~Kv~Li~~c~~~ki~-vI--ss~Gag~k~ 159 (263)
T COG1179 110 TEENLEDLLSK-GFDYVIDAIDS------------------VRAKVALIAYCRRNKIP-VI--SSMGAGGKL 159 (263)
T ss_pred CHhHHHHHhcC-CCCEEEEchhh------------------hHHHHHHHHHHHHcCCC-EE--eeccccCCC
Confidence 77788888876 79999987332 33444699999999984 65 666665543
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.26 E-value=0.21 Score=47.20 Aligned_cols=97 Identities=13% Similarity=0.124 Sum_probs=61.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc--------CCCCceeeecccccCCCH-----------HHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR--------DDETWIFVSSKEADLSNL-----------ESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~--------~~~~~~~~~~~~~Dl~~~-----------~~~~~~~~~~~~d~Vih 65 (358)
|||.|.|+ |.+|..++..|...|.. ....... ...|+.+. .+. +.+. ++|+||-
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g---~a~dl~~~~~~~~~~~i~~~d~-~~l~--~aDiVii 73 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEG---EAMDLAHGTPFVKPVRIYAGDY-ADCK--GADVVVI 73 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhh---HHHHHHccccccCCeEEeeCCH-HHhC--CCCEEEE
Confidence 48999997 99999999999988741 0000000 01111100 111 2345 5899999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
+++... ....+.......|+...+.+.+.+.+.+.+-++.+-|
T Consensus 74 ta~~~~---~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 74 TAGANQ---KPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred ccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 988643 2234556788999999999999999887554444433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.34 Score=45.16 Aligned_cols=24 Identities=17% Similarity=0.104 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.| .|-+|+.++..|...|.
T Consensus 28 s~VlIvG-~GGLGs~va~~LA~aGV 51 (287)
T PRK08223 28 SRVAIAG-LGGVGGIHLLTLARLGI 51 (287)
T ss_pred CCEEEEC-CCHHHHHHHHHHHHhCC
Confidence 4899999 58899999999999987
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=94.19 E-value=0.43 Score=43.43 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.| .|-+|++++..|...|.
T Consensus 25 ~~VlvvG-~GglGs~va~~La~~Gv 48 (240)
T TIGR02355 25 SRVLIVG-LGGLGCAASQYLAAAGV 48 (240)
T ss_pred CcEEEEC-cCHHHHHHHHHHHHcCC
Confidence 4899999 68999999999999986
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.55 Score=44.34 Aligned_cols=154 Identities=17% Similarity=0.148 Sum_probs=87.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCCCCceee-----ecccccCCCHHH------------HHHHHhccCCcEEEEccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV-----SSKEADLSNLES------------TQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~-----~~~~~Dl~~~~~------------~~~~~~~~~~d~Vih~a~ 68 (358)
||.|.|+ |.+|+.++..|+..+.-....+..+ .-...||.+... --+.++ ++|+||-+|+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~--~aDivvitaG 77 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCA--DADIIVITAG 77 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhC--CCCEEEECCC
Confidence 5899997 9999999999998765210000000 000112211110 023444 5999999999
Q ss_pred ccCCccccccc--hhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCcccccc---CCCCCCCCcchHH-
Q psy7590 69 MVGGLFHNMSH--NLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVH---NGPPHPSNFGYSH- 142 (358)
Q Consensus 69 ~~~~~~~~~~~--~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~---~~~~~p~~~~Y~~- 142 (358)
.... .-.. -.+.+..|..-.+.+.+...+++.+-++.+-|- |.|--.+. .....+.. ..|.
T Consensus 78 ~~~k---pg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsN---------PvDv~t~~~~k~sg~p~~r-viG~g 144 (307)
T cd05290 78 PSID---PGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITN---------PLDIAVYIAATEFDYPANK-VIGTG 144 (307)
T ss_pred CCCC---CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC---------cHHHHHHHHHHHhCcChhh-eeccc
Confidence 7531 1122 378899999999999999999986655444332 22211100 00111111 2333
Q ss_pred HHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 143 AKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
+-+..-++-...++..+++...++.. |.|.+..
T Consensus 145 t~LDs~R~~~~la~~l~v~~~~V~~~-ViGeHGd 177 (307)
T cd05290 145 TMLDTARLRRIVADKYGVDPKNVTGY-VLGEHGS 177 (307)
T ss_pred chHHHHHHHHHHHHHhCCCcccEEEE-EEecCCC
Confidence 44555555566667778887777764 7787643
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.2 Score=47.97 Aligned_cols=24 Identities=33% Similarity=0.558 Sum_probs=21.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g 28 (358)
++|.|+||||++|+.+++.|.++.
T Consensus 6 ~~VaIvGATG~vG~ell~lL~~h~ 29 (347)
T PRK06728 6 YHVAVVGATGAVGQKIIELLEKET 29 (347)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHCC
Confidence 589999999999999999998653
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.65 Score=43.71 Aligned_cols=100 Identities=16% Similarity=0.135 Sum_probs=60.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc-c------CCCCceee--ec--------ccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK-R------DDETWIFV--SS--------KEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~-~------~~~~~~~~--~~--------~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
||||.|+|+ |.+|..++..|...+. + ........ +. ....++...+. +.+. ++|+||-+
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~--~aDiVii~ 77 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIA--GSDVVVIT 77 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHC--CCCEEEEC
Confidence 469999998 9999999999988764 1 00000000 00 00011101112 2344 59999998
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCE-EEEee
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK-VVSCL 110 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r-~V~~S 110 (358)
++... ....+..+....|+...+.+++...+...+. +|.+|
T Consensus 78 ~~~p~---~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 78 AGVPR---KPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred CCCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 87643 2223455677889999999999998886543 55444
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.16 Score=49.58 Aligned_cols=67 Identities=10% Similarity=0.102 Sum_probs=44.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc-----CCCCce-----eee-cccc--cCCCH----HHHHHHHhccCCcEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR-----DDETWI-----FVS-SKEA--DLSNL----ESTQQLFSKYKPTHV 63 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~~~-----~~~-~~~~--Dl~~~----~~~~~~~~~~~~d~V 63 (358)
|+++|+|||||++..+|..+++.|.+.|++ ...... .++ ++.. .-.++ +.+.+++++.++|+|
T Consensus 1 ~~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 1 MNTKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 778899999999999999999999999985 111000 010 1111 11232 556666777789999
Q ss_pred EEcc
Q psy7590 64 IHLA 67 (358)
Q Consensus 64 ih~a 67 (358)
|-+.
T Consensus 81 IP~~ 84 (389)
T PRK06849 81 IPTC 84 (389)
T ss_pred EECC
Confidence 9654
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.55 Score=42.82 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=22.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.|+ |-+|+.+++.|...|.
T Consensus 33 ~~VliiG~-GglGs~va~~La~~Gv 56 (245)
T PRK05690 33 ARVLVVGL-GGLGCAASQYLAAAGV 56 (245)
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCC
Confidence 58999996 9999999999999986
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.13 Score=50.06 Aligned_cols=53 Identities=13% Similarity=0.289 Sum_probs=37.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
+++|+|+||.|.+|..++..|.+.|+. .. ..|..+.++..+++. ++|+||-|.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~----V~-----~~d~~~~~~~~~~~~--~aDlVilav 150 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQ----VR-----ILEQDDWDRAEDILA--DAGMVIVSV 150 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCe----EE-----EeCCCcchhHHHHHh--cCCEEEEeC
Confidence 468999999999999999999998862 11 122222234455666 589999664
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=93.97 E-value=0.17 Score=50.24 Aligned_cols=59 Identities=19% Similarity=0.274 Sum_probs=45.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC------CceeeecccccCCCHHHHHHH-HhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE------TWIFVSSKEADLSNLESTQQL-FSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~------~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~ 66 (358)
|+|+|+|+ |.+|+++++.|.+.|++ +.. ....++.+.+|.+++..+.++ +. ++|.||-+
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~--~a~~vi~~ 72 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAE--DADLLIAV 72 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCC--cCCEEEEe
Confidence 48999996 99999999999998874 111 113456678999999988887 55 58988855
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.6 Score=42.19 Aligned_cols=24 Identities=17% Similarity=0.274 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.| .|-+|++++..|...|.
T Consensus 28 ~~VlIiG-~GGlGs~ia~~La~~Gv 51 (231)
T PRK08328 28 AKVAVVG-VGGLGSPVAYYLAAAGV 51 (231)
T ss_pred CcEEEEC-CCHHHHHHHHHHHHcCC
Confidence 4899999 68899999999999986
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.53 Score=45.44 Aligned_cols=89 Identities=9% Similarity=-0.010 Sum_probs=55.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------------------------------------CCCCceeeecccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------------------------------------DDETWIFVSSKEADL 45 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------------------------------------~~~~~~~~~~~~~Dl 45 (358)
.+|||.|+ |-+|++++..|...|.. .......++.+...+
T Consensus 29 ~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~~i 107 (355)
T PRK05597 29 AKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVRRL 107 (355)
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEeec
Confidence 58999994 88999999999999872 000111222223333
Q ss_pred CCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceec
Q psy7590 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116 (358)
Q Consensus 46 ~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~ 116 (358)
+.+...+.++ ++|+||.+... ...-..+-++|.+.+++ ||+.++.+.+|
T Consensus 108 -~~~~~~~~~~--~~DvVvd~~d~------------------~~~r~~~n~~c~~~~ip-~v~~~~~g~~g 156 (355)
T PRK05597 108 -TWSNALDELR--DADVILDGSDN------------------FDTRHLASWAAARLGIP-HVWASILGFDA 156 (355)
T ss_pred -CHHHHHHHHh--CCCEEEECCCC------------------HHHHHHHHHHHHHcCCC-EEEEEEecCeE
Confidence 2344556666 48888876432 11222366889999975 88887665554
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.19 Score=47.37 Aligned_cols=26 Identities=19% Similarity=0.406 Sum_probs=23.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
+|+|.|+| .|.+|..++..|++.|++
T Consensus 2 ~~~V~VIG-~G~mG~~iA~~la~~G~~ 27 (308)
T PRK06129 2 MGSVAIIG-AGLIGRAWAIVFARAGHE 27 (308)
T ss_pred CcEEEEEC-ccHHHHHHHHHHHHCCCe
Confidence 35899999 899999999999999873
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.24 Score=49.19 Aligned_cols=61 Identities=21% Similarity=0.248 Sum_probs=45.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------CceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
+++|+|+|+ |.+|+.+++.|.+.|+. ... ....+..+.+|.++++.+.++--. ++++||-+
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~-~a~~vi~~ 304 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGID-EADAFIAL 304 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCc-cCCEEEEC
Confidence 468999996 99999999999998873 111 112345678999999988766543 68988833
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.70 E-value=0.39 Score=45.59 Aligned_cols=99 Identities=16% Similarity=0.220 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------cccc-------------CCCHHHHHHHHhccCCcE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEAD-------------LSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~D-------------l~~~~~~~~~~~~~~~d~ 62 (358)
+.+||.|+|| |.+|+.++..|...+.. ....++. ...| +....+.+ ++. ++|+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~---~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~--~ADi 76 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLG---DVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIK--DSDV 76 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCC---eEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhC--CCCE
Confidence 4469999997 99999999988877731 0111100 0011 11112233 555 6999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCE-EEEeec
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK-VVSCLS 111 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r-~V~~SS 111 (358)
||-+++... .......+....|....+.+.+.+.+...+. +|.+|-
T Consensus 77 VVitag~~~---~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 77 VVITAGVQR---KEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred EEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998643 2224456788899999999999999987664 555543
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.18 Score=42.77 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=21.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
||+|.+.| .|-+|+.+++.|++.|++
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~ 26 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYE 26 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTE
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCe
Confidence 56999999 699999999999999983
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.49 Score=43.99 Aligned_cols=84 Identities=19% Similarity=0.193 Sum_probs=50.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC---CCce-eeecccccCCCHHHHHHHHhcc---CCc-EEEEccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD---ETWI-FVSSKEADLSNLESTQQLFSKY---KPT-HVIHLAAMV 70 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~---~~~~-~~~~~~~Dl~~~~~~~~~~~~~---~~d-~Vih~a~~~ 70 (358)
.+|+|.|++|-+|+.+++.+.+.+.. .. .... .+.-...-+..++++.+++... .+| ++|.+..+.
T Consensus 12 i~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~~v~~~~~~dl~~~l~~~~~~~~~~VvIDFT~P~ 91 (286)
T PLN02775 12 IPIMVNGCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVGVTVEVCGVEVRLVGPSEREAVLSSVKAEYPNLIVVDYTLPD 91 (286)
T ss_pred CeEEEECCCChHHHHHHHHHhcCCCEEEEEeccccccccccceeccceeeeecCccHHHHHHHhhccCCCEEEEECCChH
Confidence 48999999999999999999985442 00 0000 1100011222234455555332 599 899774432
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
.+...+++|.++|++-+|
T Consensus 92 -------------------a~~~~~~~~~~~g~~~Vv 109 (286)
T PLN02775 92 -------------------AVNDNAELYCKNGLPFVM 109 (286)
T ss_pred -------------------HHHHHHHHHHHCCCCEEE
Confidence 445678899999986443
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=93.45 E-value=0.72 Score=42.64 Aligned_cols=24 Identities=25% Similarity=0.230 Sum_probs=21.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.| .|-+|++++..|...|.
T Consensus 31 s~VlVvG-~GGVGs~vae~Lar~GV 54 (268)
T PRK15116 31 AHICVVG-IGGVGSWAAEALARTGI 54 (268)
T ss_pred CCEEEEC-cCHHHHHHHHHHHHcCC
Confidence 4899999 69999999999999985
|
|
| >PRK05678 succinyl-CoA synthetase subunit alpha; Validated | Back alignment and domain information |
|---|
Probab=93.32 E-value=2.8 Score=39.29 Aligned_cols=86 Identities=10% Similarity=0.063 Sum_probs=56.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecc-----cccCCCHHHHHHHHhccCCcEEEEcccccCCccccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSK-----EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSH 79 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~ 79 (358)
.||+|.|.||-+|+.+.+.|++.|++ ....+... ...+.-..++.++-+...+|.++-+...
T Consensus 9 ~~~~v~~~~~~~g~~~l~~l~~~g~~---~v~pVnp~~~~~~v~G~~~y~sv~dlp~~~~~DlAvi~vp~---------- 75 (291)
T PRK05678 9 TKVIVQGITGKQGTFHTEQMLAYGTN---IVGGVTPGKGGTTVLGLPVFNTVAEAVEATGANASVIYVPP---------- 75 (291)
T ss_pred CeEEEeCCCchHHHHHHHHHHHCCCC---EEEEECCCCCCCeEeCeeccCCHHHHhhccCCCEEEEEcCH----------
Confidence 48999999999999999999987763 22122211 1123344566666662127887754221
Q ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 80 NLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 80 ~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
..+..+++.|.+.|++.+|.+|+.
T Consensus 76 ---------~~v~~~l~e~~~~gvk~avI~s~G 99 (291)
T PRK05678 76 ---------PFAADAILEAIDAGIDLIVCITEG 99 (291)
T ss_pred ---------HHHHHHHHHHHHCCCCEEEEECCC
Confidence 234457888889999988877774
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.42 Score=50.31 Aligned_cols=84 Identities=15% Similarity=0.169 Sum_probs=55.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-c--------------------------------------CCCCceeeecccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-R--------------------------------------DDETWIFVSSKEADL 45 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-~--------------------------------------~~~~~~~~~~~~~Dl 45 (358)
.+|+|+|+ | +|++++..|...|. . .......++.+...+
T Consensus 108 ~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i 185 (722)
T PRK07877 108 LRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGL 185 (722)
T ss_pred CCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 48999999 8 99999999999883 1 001112223333444
Q ss_pred CCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 46 ~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
+++.+.+++. ++|+||.|.-. +..-..|.++|.+.++. +|+.|+.
T Consensus 186 -~~~n~~~~l~--~~DlVvD~~D~------------------~~~R~~ln~~a~~~~iP-~i~~~~~ 230 (722)
T PRK07877 186 -TEDNVDAFLD--GLDVVVEECDS------------------LDVKVLLREAARARRIP-VLMATSD 230 (722)
T ss_pred -CHHHHHHHhc--CCCEEEECCCC------------------HHHHHHHHHHHHHcCCC-EEEEcCC
Confidence 3667777777 58999987332 22222466899999985 8877753
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=93.11 E-value=1.1 Score=40.47 Aligned_cols=24 Identities=21% Similarity=0.221 Sum_probs=21.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.| .|-+|+++++.|...|.
T Consensus 12 ~~VlVvG-~GGvGs~va~~Lar~GV 35 (231)
T cd00755 12 AHVAVVG-LGGVGSWAAEALARSGV 35 (231)
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCC
Confidence 4899999 68999999999999987
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.65 Score=43.92 Aligned_cols=23 Identities=26% Similarity=0.264 Sum_probs=20.8
Q ss_pred EEEEEcCCChhHHHHHHHHHHccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||||.|+ |-+|.++++.|...|.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gv 23 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGF 23 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcC
Confidence 5899995 8999999999999887
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.64 Score=42.95 Aligned_cols=23 Identities=22% Similarity=0.367 Sum_probs=21.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~ 27 (358)
+||.|+|++|.+|+.+++.+.+.
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~ 24 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAA 24 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhC
Confidence 58999999999999999999875
|
|
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.72 E-value=0.24 Score=46.72 Aligned_cols=91 Identities=9% Similarity=0.090 Sum_probs=52.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CCC---CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DDE---TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
.++|.| ||||.+|+.+++.|-+++.. ... ....+.+..-++.-.+.-...++ ++|++|. ++..
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i~f~g~~~~V~~l~~~~f~--~vDia~f-ag~~--- 75 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGIRFNNKAVEQIAPEEVEWA--DFNYVFF-AGKM--- 75 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEEEECCEEEEEEECCccCcc--cCCEEEE-cCHH---
Confidence 358999 99999999999988887652 000 11112111111111111112344 5899887 5531
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCC
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDK 118 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~ 118 (358)
..+.....+.++|+ .+|=-||..=..++
T Consensus 76 ----------------~s~~~ap~a~~aG~-~VIDnSsa~Rmd~d 103 (322)
T PRK06901 76 ----------------AQAEHLAQAAEAGC-IVIDLYGICAALAN 103 (322)
T ss_pred ----------------HHHHHHHHHHHCCC-EEEECChHhhCCCC
Confidence 34456677888887 57777776544333
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=92.71 E-value=0.91 Score=44.42 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+| .|-+|++++..|...|.
T Consensus 43 ~~VlviG-~GGlGs~va~~La~~Gv 66 (392)
T PRK07878 43 ARVLVIG-AGGLGSPTLLYLAAAGV 66 (392)
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCC
Confidence 4899999 68899999999999987
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=92.62 E-value=0.59 Score=44.99 Aligned_cols=99 Identities=16% Similarity=0.121 Sum_probs=60.9
Q ss_pred CCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 59 KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++..+|.+-|..+. ...........+.-+-+..|+++.. +.+.|++|.++|.... ...
T Consensus 203 ~i~t~is~LGsts~--~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~----------------~~s 264 (410)
T PF08732_consen 203 DIKTMISTLGSTSA--QAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNN----------------AIS 264 (410)
T ss_pred hhhhheecCCCChh--hccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcc----------------hhh
Confidence 35667766554431 1111122222333333444555555 6678899999997431 111
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
.. .+|.+.|...|+-+.......=-..+|+|||-+.|.+..
T Consensus 265 ~~-f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 265 SM-FPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred hh-hhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence 12 279999999999997764432236999999999998876
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=92.52 E-value=0.3 Score=47.64 Aligned_cols=62 Identities=13% Similarity=0.209 Sum_probs=45.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCCC---ceee-ecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDET---WIFV-SSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~---~~~~-~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
.|+|+|+| +|.+|..++..+.+.|++ .... .... .++..|..|++.+.+++++.++|.|+-.
T Consensus 12 ~~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 12 ATRVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHRSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhhheEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 46899998 579999999999999974 1111 1111 1345788899999999987789999843
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=92.43 E-value=0.34 Score=48.15 Aligned_cols=26 Identities=31% Similarity=0.403 Sum_probs=23.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
.++|+|+|+++ +|..+++.|++.|+.
T Consensus 5 ~k~v~iiG~g~-~G~~~A~~l~~~G~~ 30 (450)
T PRK14106 5 GKKVLVVGAGV-SGLALAKFLKKLGAK 30 (450)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCCCE
Confidence 46899999877 999999999999983
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=92.42 E-value=0.98 Score=40.89 Aligned_cols=23 Identities=22% Similarity=0.234 Sum_probs=20.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||||.| .|-+|..+++.|...|.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gv 23 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGF 23 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCC
Confidence 589999 68999999999999987
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.26 Score=39.45 Aligned_cols=82 Identities=18% Similarity=0.131 Sum_probs=45.6
Q ss_pred CEEEEEcCC---ChhHHHHHHHHHHccccCCCCceeeecccccCC---CHHHHHHHHhccCCcEEEEcccccCCcccccc
Q psy7590 5 KIILVTGGT---GLVGKAIEKIVKEEEKRDDETWIFVSSKEADLS---NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 5 ~~VlItGat---G~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 78 (358)
|+|+|+|+| +..|..+++.|++.|++ ...+.....++. -..++.+ . ...+|.++-+...
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~----v~~Vnp~~~~i~G~~~y~sl~e-~-p~~iDlavv~~~~--------- 65 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYE----VYPVNPKGGEILGIKCYPSLAE-I-PEPIDLAVVCVPP--------- 65 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-E----EEEESTTCSEETTEE-BSSGGG-C-SST-SEEEE-S-H---------
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCE----EEEECCCceEECcEEeeccccC-C-CCCCCEEEEEcCH---------
Confidence 579999998 77899999999998863 112211111111 1222333 1 2368888865332
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
..+..+++.|.+.|++.+++.++
T Consensus 66 ----------~~~~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 66 ----------DKVPEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp ----------HHHHHHHHHHHHHT-SEEEE-TT
T ss_pred ----------HHHHHHHHHHHHcCCCEEEEEcc
Confidence 24446888888889998887776
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=92.31 E-value=1.1 Score=39.89 Aligned_cols=24 Identities=17% Similarity=0.259 Sum_probs=21.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.| .|-+|+.++..|...|.
T Consensus 29 ~~V~ViG-~GglGs~ia~~La~~Gv 52 (212)
T PRK08644 29 AKVGIAG-AGGLGSNIAVALARSGV 52 (212)
T ss_pred CCEEEEC-cCHHHHHHHHHHHHcCC
Confidence 4899999 59999999999999987
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=92.01 E-value=1.2 Score=43.22 Aligned_cols=89 Identities=17% Similarity=0.093 Sum_probs=55.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------------C---------------------------CCCceeeecccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------------D---------------------------DETWIFVSSKEADL 45 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------------~---------------------------~~~~~~~~~~~~Dl 45 (358)
.+|+|+| .|-+|++++..|...|.. + ......++.+...+
T Consensus 42 ~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i 120 (370)
T PRK05600 42 ARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRERL 120 (370)
T ss_pred CcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeeeec
Confidence 4899999 588999999999999862 0 00011122222233
Q ss_pred CCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceec
Q psy7590 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116 (358)
Q Consensus 46 ~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~ 116 (358)
+++.+.++++ ++|+||.|... ...-..+-++|.+.+++ +|+.+..+-+|
T Consensus 121 -~~~~~~~~~~--~~DlVid~~Dn------------------~~~r~~in~~~~~~~iP-~v~~~~~g~~G 169 (370)
T PRK05600 121 -TAENAVELLN--GVDLVLDGSDS------------------FATKFLVADAAEITGTP-LVWGTVLRFHG 169 (370)
T ss_pred -CHHHHHHHHh--CCCEEEECCCC------------------HHHHHHHHHHHHHcCCC-EEEEEEecCEE
Confidence 3445566676 48888877332 22223466889999875 88877665444
|
|
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.96 E-value=1.1 Score=48.52 Aligned_cols=90 Identities=10% Similarity=0.153 Sum_probs=57.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------------------------------------CCCCceeeecccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------------------------------------DDETWIFVSSKEADL 45 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------------------------------------~~~~~~~~~~~~~Dl 45 (358)
.+|+|.| .|-+|+.++..|...|.. .......++.+...+
T Consensus 333 srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~~~I 411 (989)
T PRK14852 333 SRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFPEGV 411 (989)
T ss_pred CcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 4899999 688999999999999872 001111222222233
Q ss_pred CCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecccee
Q psy7590 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIF 115 (358)
Q Consensus 46 ~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy 115 (358)
+++.+.+.++ ++|+||.+.-... +..-+.+.+.|.+.+++ +|+.++.+.+
T Consensus 412 -~~en~~~fl~--~~DiVVDa~D~~~----------------~~~rr~l~~~c~~~~IP-~I~ag~~G~~ 461 (989)
T PRK14852 412 -AAETIDAFLK--DVDLLVDGIDFFA----------------LDIRRRLFNRALELGIP-VITAGPLGYS 461 (989)
T ss_pred -CHHHHHHHhh--CCCEEEECCCCcc----------------HHHHHHHHHHHHHcCCC-EEEeeccccC
Confidence 4566677777 5899987643321 22334577888899985 8877775433
|
|
| >TIGR00877 purD phosphoribosylamine--glycine ligase | Back alignment and domain information |
|---|
Probab=91.93 E-value=0.31 Score=48.09 Aligned_cols=59 Identities=14% Similarity=0.101 Sum_probs=43.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----CCC-----CceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----DDE-----TWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
|||+|+|+ |..+..|++.+++.++. .+. ......++..|..|.+.+.++.++.++|.||
T Consensus 1 ~kiliiG~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~id~vi 69 (423)
T TIGR00877 1 MKVLVIGN-GGREHALAWKLAQSPLVKYVYVAPGNAGTARLAKNKNVAISITDIEALVEFAKKKKIDLAV 69 (423)
T ss_pred CEEEEECC-ChHHHHHHHHHHhCCCccEEEEECCCHHHhhhcccccccCCCCCHHHHHHHHHHhCCCEEE
Confidence 48999995 66699999999997752 111 1111223457889999999999988899988
|
This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=91.91 E-value=1.3 Score=38.05 Aligned_cols=23 Identities=17% Similarity=0.328 Sum_probs=20.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+|+|.| .|-+|+++++.|...|.
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gv 23 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGV 23 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCC
Confidence 589999 59999999999999987
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=91.87 E-value=1.3 Score=43.13 Aligned_cols=24 Identities=17% Similarity=0.266 Sum_probs=21.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.| .|-+|++++..|...|.
T Consensus 136 ~~VlvvG-~GG~Gs~ia~~La~~Gv 159 (376)
T PRK08762 136 ARVLLIG-AGGLGSPAALYLAAAGV 159 (376)
T ss_pred CcEEEEC-CCHHHHHHHHHHHHcCC
Confidence 4899998 57799999999999987
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=91.86 E-value=0.4 Score=44.87 Aligned_cols=63 Identities=17% Similarity=0.161 Sum_probs=43.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CC---CCce-----------eeecccccCCCHHHHHHHHhccCCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DD---ETWI-----------FVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~---~~~~-----------~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
.++++|+|| |-+|++++..|.+.|.+ .. .+.. .+.....|+.+.+++.+.+. .+|+
T Consensus 126 ~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--~~Di 202 (289)
T PRK12548 126 GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--SSDI 202 (289)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--cCCE
Confidence 468999998 89999999999998863 11 1110 11123467777777777777 4799
Q ss_pred EEEcccc
Q psy7590 63 VIHLAAM 69 (358)
Q Consensus 63 Vih~a~~ 69 (358)
|||+-..
T Consensus 203 lINaTp~ 209 (289)
T PRK12548 203 LVNATLV 209 (289)
T ss_pred EEEeCCC
Confidence 9986543
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=91.78 E-value=2 Score=33.05 Aligned_cols=85 Identities=16% Similarity=0.170 Sum_probs=54.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHH
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFR 85 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~ 85 (358)
+|||+||-...-..+-+.+.+.|. .........++-.....+.+.+. ++|.||-+....+
T Consensus 1 ~vliVGG~~~~~~~~~~~~~~~G~----~~~~hg~~~~~~~~~~~l~~~i~--~aD~VIv~t~~vs-------------- 60 (97)
T PF10087_consen 1 SVLIVGGREDRERRYKRILEKYGG----KLIHHGRDGGDEKKASRLPSKIK--KADLVIVFTDYVS-------------- 60 (97)
T ss_pred CEEEEcCCcccHHHHHHHHHHcCC----EEEEEecCCCCccchhHHHHhcC--CCCEEEEEeCCcC--------------
Confidence 589999855666667777777764 11111001233333345778887 5999998877664
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 86 VNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 86 ~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
=..+..+-+.|++.++ .++|+.+.+
T Consensus 61 --H~~~~~vk~~akk~~i-p~~~~~~~~ 85 (97)
T PF10087_consen 61 --HNAMWKVKKAAKKYGI-PIIYSRSRG 85 (97)
T ss_pred --hHHHHHHHHHHHHcCC-cEEEECCCC
Confidence 2245567789999997 488877543
|
|
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.55 Score=44.10 Aligned_cols=92 Identities=11% Similarity=0.125 Sum_probs=52.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc-c------CCCCceeeec-ccccCC-CHHHHHHHHhc---cCCcEEEEccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK-R------DDETWIFVSS-KEADLS-NLESTQQLFSK---YKPTHVIHLAA 68 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~-~------~~~~~~~~~~-~~~Dl~-~~~~~~~~~~~---~~~d~Vih~a~ 68 (358)
||++.+|.|+| +|.+|..++..+++... + .+........ ....+. ..+.++.+++. .++|+||.+.+
T Consensus 1 ~m~klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~~~ie~LL~~~~~~dIDiVf~AT~ 79 (302)
T PRK08300 1 MMSKLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSAEGIDGLLAMPEFDDIDIVFDATS 79 (302)
T ss_pred CCCCCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCcccCCHHHHHhCcCCCCCCEEEECCC
Confidence 78878999999 99999998888886422 1 0000000000 000111 11234444443 35888887654
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
.. ........+.++|+ ++|-.|+..
T Consensus 80 a~-------------------~H~e~a~~a~eaGk-~VID~sPA~ 104 (302)
T PRK08300 80 AG-------------------AHVRHAAKLREAGI-RAIDLTPAA 104 (302)
T ss_pred HH-------------------HHHHHHHHHHHcCC-eEEECCccc
Confidence 31 23446677778886 677666665
|
|
| >KOG1202|consensus | Back alignment and domain information |
|---|
Probab=91.74 E-value=0.44 Score=51.76 Aligned_cols=150 Identities=16% Similarity=0.177 Sum_probs=98.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------C--------------CCCceeeecccccCCCHHHHHHHHhc----c
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------D--------------DETWIFVSSKEADLSNLESTQQLFSK----Y 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~--------------~~~~~~~~~~~~Dl~~~~~~~~~~~~----~ 58 (358)
.+..+|+||-|--|-.|++.|..+|-| + ..+...+.+-.-|++..+....+++. .
T Consensus 1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~ 1847 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLG 1847 (2376)
T ss_pred cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcc
Confidence 357899999999999999999999974 0 11112233334566666666666654 2
Q ss_pred CCcEEEEcccccC-Cccc--cccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 59 KPTHVIHLAAMVG-GLFH--NMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 59 ~~d~Vih~a~~~~-~~~~--~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
.+-.|||+|+... ...+ +..+-....+.-..+|.+|=.+.++.- .+-||.+||.+.=..+ .
T Consensus 1848 ~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN--------------~ 1913 (2376)
T KOG1202|consen 1848 PVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGN--------------A 1913 (2376)
T ss_pred cccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCC--------------C
Confidence 4678999998732 1111 112334455566778888887777764 5689999998542111 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcc
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNV 170 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v 170 (358)
-.. -||.+-...|++++.- +..|++-+.+.-+.|
T Consensus 1914 GQt--NYG~aNS~MERiceqR-r~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1914 GQT--NYGLANSAMERICEQR-RHEGFPGTAIQWGAI 1947 (2376)
T ss_pred ccc--ccchhhHHHHHHHHHh-hhcCCCcceeeeecc
Confidence 112 4999999999998764 556888888876544
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=91.74 E-value=1.4 Score=46.23 Aligned_cols=86 Identities=12% Similarity=0.198 Sum_probs=55.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------------------------------------CCCCceeeecccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------------------------------------DDETWIFVSSKEADL 45 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------------------------------------~~~~~~~~~~~~~Dl 45 (358)
.+|+|.| .|-+|++++..|...|.. .......++.+...+
T Consensus 44 ~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~~~i 122 (679)
T PRK14851 44 AKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFPAGI 122 (679)
T ss_pred CeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 5899999 688999999999999872 001112233334444
Q ss_pred CCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 46 ~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
+++.+.+.++ ++|+||.+.-... +..-..|.++|.+.++. +|+.+.
T Consensus 123 -~~~n~~~~l~--~~DvVid~~D~~~----------------~~~r~~l~~~c~~~~iP-~i~~g~ 168 (679)
T PRK14851 123 -NADNMDAFLD--GVDVVLDGLDFFQ----------------FEIRRTLFNMAREKGIP-VITAGP 168 (679)
T ss_pred -ChHHHHHHHh--CCCEEEECCCCCc----------------HHHHHHHHHHHHHCCCC-EEEeec
Confidence 3556677777 5899997643211 12223477889999985 776553
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.74 Score=43.30 Aligned_cols=94 Identities=19% Similarity=0.188 Sum_probs=58.9
Q ss_pred EEEEcCCChhHHHHHHHHHHccccCCCCcee-----eecccccCCCH------------HHHHHHHhccCCcEEEEcccc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIF-----VSSKEADLSNL------------ESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~~~~~~~~-----~~~~~~Dl~~~------------~~~~~~~~~~~~d~Vih~a~~ 69 (358)
|.|.|+ |.+|+.++..|+..|.-....... ..-...|+.+. .+ .+.+. ++|+||.+++.
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~-~~~l~--~aDiVIitag~ 76 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD-YADAA--DADIVVITAGA 76 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC-HHHhC--CCCEEEEcCCC
Confidence 568885 889999999999887410000000 00001111111 11 23555 59999999987
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
.. ....+.......|+...+.+.+.+++.+.+-+|
T Consensus 77 p~---~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~v 111 (300)
T cd00300 77 PR---KPGETRLDLINRNAPILRSVITNLKKYGPDAII 111 (300)
T ss_pred CC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 53 223456778899999999999999998855333
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.56 Score=43.16 Aligned_cols=96 Identities=22% Similarity=0.199 Sum_probs=60.8
Q ss_pred EEEEcCCChhHHHHHHHHHHcc--c--c------CCCCceee--------ecc-cccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEE--K--R------DDETWIFV--------SSK-EADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g--~--~------~~~~~~~~--------~~~-~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
|.|+||+|.+|..++..|+..+ . + ...+.... ... ...+.-..++.++++ ++|.||-++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~--~aDiVv~t~ 78 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFK--DADVVIITA 78 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhC--CCCEEEECC
Confidence 5799999999999999999887 2 1 01111100 000 011111122345666 599999998
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+.... .-.........|+...+.+.+...+...+-++
T Consensus 79 ~~~~~---~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~ 115 (263)
T cd00650 79 GVGRK---PGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWI 115 (263)
T ss_pred CCCCC---cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEE
Confidence 87542 22345568888999999999999998755333
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha | Back alignment and domain information |
|---|
Probab=91.46 E-value=8.2 Score=36.32 Aligned_cols=87 Identities=13% Similarity=0.067 Sum_probs=54.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecc-----cccCCCHHHHHHHHhccCCcEEEEcccccCCcccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSK-----EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 78 (358)
..||||-|-||..|+...+..++-|.. -..++..- ...+.-..++.++-+...+|.++-+...
T Consensus 12 ~~~v~~~gi~~~~~~~~~~~~~~ygt~---~~~gV~p~~~~~~i~G~~~y~sv~dlp~~~~~DlAvI~vPa--------- 79 (300)
T PLN00125 12 NTRVICQGITGKNGTFHTEQAIEYGTK---MVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPP--------- 79 (300)
T ss_pred CCeEEEecCCCHHHHHHHHHHHHhCCc---EEEEECCCCCCceEcCeeccCCHHHHhhccCCCEEEEecCH---------
Confidence 358999999999999999999988752 11111111 0122334455555553236877754322
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
......++.|.+.|++.+|-+|+.
T Consensus 80 ----------~~v~~al~e~~~~Gvk~~vIisaG 103 (300)
T PLN00125 80 ----------PFAAAAILEAMEAELDLVVCITEG 103 (300)
T ss_pred ----------HHHHHHHHHHHHcCCCEEEEECCC
Confidence 133457777888999988877765
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=91.32 E-value=1.2 Score=42.05 Aligned_cols=99 Identities=17% Similarity=0.137 Sum_probs=60.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCcee---eec--------ccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIF---VSS--------KEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~---~~~--------~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
|||.|.|+ |.+|..++..|...|+. ....... .+. ....+.-..++.+ +. ++|+||-++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~--~aDiVIita 77 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TA--NSDIVVITA 77 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hC--CCCEEEEcC
Confidence 48999995 99999999999987751 0000000 000 0011111112222 34 599999998
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+... ....+..+....|....+.+++...+++.+ .+|.+|
T Consensus 78 g~p~---~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t 118 (305)
T TIGR01763 78 GLPR---KPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS 118 (305)
T ss_pred CCCC---CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 8653 122455678889999999999999888644 344433
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=91.24 E-value=0.45 Score=46.18 Aligned_cols=58 Identities=17% Similarity=0.208 Sum_probs=43.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCCCce---ee-ecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDETWI---FV-SSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~~~---~~-~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
|++|+|+|+ |.+|+.++..+.+.|++ ...... .. ..+.+|..|.+.+.++.+ .+|+|.
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~ad~~~~~~~~D~~~l~~~a~--~~dvit 68 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVADEVIVADYDDVAALRELAE--QCDVIT 68 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhCceEEecCCCCHHHHHHHHh--cCCEEE
Confidence 468999996 89999999999999985 111111 11 234578899999999988 589874
|
|
| >KOG1198|consensus | Back alignment and domain information |
|---|
Probab=91.09 E-value=0.43 Score=45.91 Aligned_cols=67 Identities=21% Similarity=0.218 Sum_probs=45.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc-----CCCCceeeecc----cccCCCHHHHHHHHh--ccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR-----DDETWIFVSSK----EADLSNLESTQQLFS--KYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~-----~~~~~~~~~~~----~~Dl~~~~~~~~~~~--~~~~d~Vih~a~~~ 70 (358)
.+.|||.||+|-+|++.++.....+ .. +......+... ..|..+++-.+...+ ..++|+|++|++..
T Consensus 158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGS 236 (347)
T ss_pred CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCC
Confidence 4589999999999999999999888 31 22222222221 256777555444444 33699999998864
|
|
| >PRK13789 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
Probab=90.99 E-value=0.59 Score=46.30 Aligned_cols=63 Identities=13% Similarity=0.078 Sum_probs=45.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc-----CCCCc--ee---eecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR-----DDETW--IF---VSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~~--~~---~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
|.++|||||+| +|.=-.+|+..|.+.++. .+.+. .. ...+..|..|.+.+.+.++..++|.||
T Consensus 1 ~~~~~kvLviG-~g~rehal~~~~~~~~~~~~~~~~pgn~g~~~~~~~~~~~~~~~d~~~l~~~a~~~~iD~Vv 73 (426)
T PRK13789 1 MQVKLKVLLIG-SGGRESAIAFALRKSNLLSELKVFPGNGGFPDDELLPADSFSILDKSSVQSFLKSNPFDLIV 73 (426)
T ss_pred CCCCcEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEECCchHHhccccccccCcCcCCHHHHHHHHHHcCCCEEE
Confidence 66778999999 566678899999888742 11111 11 111357889999999999988899999
|
|
| >KOG1496|consensus | Back alignment and domain information |
|---|
Probab=90.97 E-value=2.4 Score=38.34 Aligned_cols=161 Identities=19% Similarity=0.195 Sum_probs=85.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc---cccCCCCceeee---------cccccCCCH-----------HHHHHHHhc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE---EKRDDETWIFVS---------SKEADLSNL-----------ESTQQLFSK 57 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~---g~~~~~~~~~~~---------~~~~Dl~~~-----------~~~~~~~~~ 57 (358)
|.+.-+||||||.|.||.+|+-.+.+- |.+.+-.+..+. -+...|.|. .+-.++|.
T Consensus 1 ~~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~PlL~~Vvattd~~~afk- 79 (332)
T KOG1496|consen 1 MKEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCALPLLKGVVATTDEVEAFK- 79 (332)
T ss_pred CCCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhhhHHHhhhcccChhhhhc-
Confidence 566669999999999999999887643 211111111110 001111110 11124555
Q ss_pred cCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCC-CccccccCCCC
Q psy7590 58 YKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYP-IDETMVHNGPP 133 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~-~~E~~~~~~~~ 133 (358)
++|+.|-.++... ..--...+....|+.--+.=-.+..++ .+| ++.+.-.+ +.+.. ..+.. |.
T Consensus 80 -dv~~ailvGa~PR---~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~K-VlVVgNPa----NTNali~~k~A----ps 146 (332)
T KOG1496|consen 80 -DVDVAILVGAMPR---REGMERKDLLSANVKIFKSQGAALEKYAKPNVK-VLVVGNPA----NTNALILKKFA----PS 146 (332)
T ss_pred -cCcEEEEeccccC---cccchhhhHHhhcceeehhhhHHHHHhcCCCce-EEEecCcc----ccchhHHhhhC----CC
Confidence 5899998888653 122234456777776554444444443 354 44333211 00111 11222 22
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
-|....-..+++.--+.....+.+.|+++.-+..-.|.|.+.
T Consensus 147 IP~kNfs~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNHS 188 (332)
T KOG1496|consen 147 IPEKNFSALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNHS 188 (332)
T ss_pred CchhcchhhhhhchhhHHHHHHHhhCCchhhcceeEEecccc
Confidence 222224566666666777777777788888887777777664
|
|
| >cd01493 APPBP1_RUB Ubiquitin activating enzyme (E1) subunit APPBP1 | Back alignment and domain information |
|---|
Probab=90.95 E-value=1.2 Score=44.03 Aligned_cols=24 Identities=17% Similarity=0.080 Sum_probs=21.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+|++| +|..+++-|.--|.
T Consensus 21 s~VlliG~gg-lGsEilKNLvL~GI 44 (425)
T cd01493 21 AHVCLLNATA-TGTEILKNLVLPGI 44 (425)
T ss_pred CeEEEEcCcH-HHHHHHHHHHHcCC
Confidence 4899999665 99999999999887
|
APPBP1 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. ABPP1 contains part of the adenylation domain. |
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.87 E-value=0.74 Score=42.51 Aligned_cols=23 Identities=17% Similarity=0.382 Sum_probs=20.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
||||.|+|. |.+|+.+++.|.+.
T Consensus 1 m~rVgIiG~-G~iG~~~~~~l~~~ 23 (265)
T PRK13303 1 MMKVAMIGF-GAIGAAVLELLEHD 23 (265)
T ss_pred CcEEEEECC-CHHHHHHHHHHhhC
Confidence 458999997 99999999999875
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.80 E-value=0.87 Score=43.69 Aligned_cols=23 Identities=26% Similarity=0.351 Sum_probs=20.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
|+||.|.|+ |.+|+.+++.+.++
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~ 23 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQ 23 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcC
Confidence 458999998 99999999988865
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.62 E-value=0.51 Score=45.74 Aligned_cols=56 Identities=16% Similarity=0.278 Sum_probs=37.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc-cccCCCCceeeecccccCCC--HHHHHHHHhccCCcEEEEcc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE-EKRDDETWIFVSSKEADLSN--LESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~-g~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~d~Vih~a 67 (358)
|...++|+|.|.+|.+|..+++.|.+. ++ ....+ |..| .....+.+. ++|+||-|.
T Consensus 1 ~~~~~~I~IIGl~GliGgslA~alk~~~~~----~V~g~-----D~~d~~~~~~~~~v~--~aDlVilav 59 (370)
T PRK08818 1 MIAQPVVGIVGSAGAYGRWLARFLRTRMQL----EVIGH-----DPADPGSLDPATLLQ--RADVLIFSA 59 (370)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhcCCC----EEEEE-----cCCccccCCHHHHhc--CCCEEEEeC
Confidence 556679999999999999999999975 22 22222 2222 122345565 589999653
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.57 E-value=0.63 Score=44.51 Aligned_cols=58 Identities=14% Similarity=0.119 Sum_probs=44.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----C----CCCceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----D----DETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~----~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
|++|.|+| .|++|+-++.+-...|++ + +.....-+.+.++.+|+++++++.+ ++|+|=
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va~~~i~~~~dD~~al~ela~--~~DViT 67 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQVADRVIVAAYDDPEALRELAA--KCDVIT 67 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcccceeecCCCCHHHHHHHHh--hCCEEE
Confidence 46899999 699999999999999985 1 1111122345678889999999999 589875
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=90.43 E-value=2.1 Score=41.82 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+| .|-+|+++++.|...|.
T Consensus 39 ~~VlivG-~GGlG~~va~~La~~Gv 62 (390)
T PRK07411 39 ASVLCIG-TGGLGSPLLLYLAAAGI 62 (390)
T ss_pred CcEEEEC-CCHHHHHHHHHHHHcCC
Confidence 4899999 58899999999999987
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=90.22 E-value=0.63 Score=45.89 Aligned_cols=27 Identities=22% Similarity=0.299 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|++|+|.|+| .|++|..++..|.+.|+
T Consensus 1 m~~~kI~VIG-lG~~G~~~A~~La~~G~ 27 (415)
T PRK11064 1 MSFETISVIG-LGYIGLPTAAAFASRQK 27 (415)
T ss_pred CCccEEEEEC-cchhhHHHHHHHHhCCC
Confidence 4578999998 79999999999999987
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=90.20 E-value=0.56 Score=45.42 Aligned_cols=60 Identities=13% Similarity=0.175 Sum_probs=45.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc-----CCCCce---ee-ecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR-----DDETWI---FV-SSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~-----~~~~~~---~~-~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
||+|+| +|.+|..+++.+.+.|++ ...... .. ..+..|..|++.+.++++..++|+|+-.
T Consensus 1 kililG-~g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~~id~v~~~ 69 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHRSYVINMLDGDALRAVIEREKPDYIVPE 69 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhCceEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence 689999 699999999999999984 111111 11 2335688899999999987789999854
|
This enzyme is an alternative to PurN (TIGR00639) |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=90.00 E-value=1.8 Score=41.26 Aligned_cols=25 Identities=32% Similarity=0.445 Sum_probs=23.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+||+|-+|+..++.++..|.
T Consensus 144 ~~VLV~gaaGgVG~~aiQlAk~~G~ 168 (326)
T COG0604 144 ETVLVHGAAGGVGSAAIQLAKALGA 168 (326)
T ss_pred CEEEEecCCchHHHHHHHHHHHcCC
Confidence 5899999999999999999999984
|
|
| >PRK13535 erythrose 4-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.96 E-value=2.4 Score=40.50 Aligned_cols=24 Identities=17% Similarity=0.331 Sum_probs=21.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
|+||.|.|+ |.+|+.+.+.|.+.+
T Consensus 1 ~~~IaInGf-GrIGR~~lr~l~e~~ 24 (336)
T PRK13535 1 TIRVAINGF-GRIGRNVLRALYESG 24 (336)
T ss_pred CeEEEEECc-CHHHHHHHHHHHhcC
Confidence 358999999 999999999999864
|
|
| >PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6 | Back alignment and domain information |
|---|
Probab=89.79 E-value=0.7 Score=35.93 Aligned_cols=80 Identities=19% Similarity=0.187 Sum_probs=49.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc--------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR--------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN 76 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~--------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 76 (358)
|||||+| +|-=-.+|+..|.+...- ........+.+..+..|.+.+.+...+.++|.|| .++
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~v~~v~~aPGN~G~~~~~~~~~~~~~d~~~l~~~a~~~~idlvv-----vGP---- 70 (100)
T PF02844_consen 1 MKVLVIG-SGGREHAIAWKLSQSPSVEEVYVAPGNPGTAELGKNVPIDITDPEELADFAKENKIDLVV-----VGP---- 70 (100)
T ss_dssp EEEEEEE-SSHHHHHHHHHHTTCTTEEEEEEEE--TTGGGTSEEE-S-TT-HHHHHHHHHHTTESEEE-----ESS----
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCCCEEEEeCCCHHHHhhceecCCCCCCHHHHHHHHHHcCCCEEE-----ECC----
Confidence 5999999 676677888888876431 1111111122355889999999999888999999 332
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCC
Q psy7590 77 MSHNLDFFRVNMKINDNVLDTSYKQGVK 104 (358)
Q Consensus 77 ~~~~~~~~~~nv~~~~~ll~aa~~~~v~ 104 (358)
+.| + ..-|.|..++.|++
T Consensus 71 -E~p--L-------~~Gl~D~l~~~gi~ 88 (100)
T PF02844_consen 71 -EAP--L-------VAGLADALRAAGIP 88 (100)
T ss_dssp -HHH--H-------HTTHHHHHHHTT-C
T ss_pred -hHH--H-------HHHHHHHHHHCCCc
Confidence 111 1 22477888888875
|
3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: |
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=89.78 E-value=1.3 Score=40.66 Aligned_cols=84 Identities=12% Similarity=0.199 Sum_probs=48.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec--------ccccCCCHHHHHHHHhccCCcEEEEcccccCCcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS--------KEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN 76 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~--------~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 76 (358)
+||.|.| .|.||+.|++.|.+... ....+..+.- ......-..++.+++.. ++|.|+-||+..
T Consensus 3 ~rvgiIG-~GaIG~~va~~l~~~~~-~~~~l~~V~~~~~~~~~~~~~~~~~~~~l~~ll~~-~~DlVVE~A~~~------ 73 (267)
T PRK13301 3 HRIAFIG-LGAIASDVAAGLLADAA-QPCQLAALTRNAADLPPALAGRVALLDGLPGLLAW-RPDLVVEAAGQQ------ 73 (267)
T ss_pred eEEEEEC-ccHHHHHHHHHHhcCCC-CceEEEEEecCCHHHHHHhhccCcccCCHHHHhhc-CCCEEEECCCHH------
Confidence 4899999 89999999999876531 1111111100 00011112335555443 699999998863
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 77 MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 77 ~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
..+.....+.++|+. ++-+|.
T Consensus 74 -------------av~e~~~~iL~~g~d-lvv~Sv 94 (267)
T PRK13301 74 -------------AIAEHAEGCLTAGLD-MIICSA 94 (267)
T ss_pred -------------HHHHHHHHHHhcCCC-EEEECh
Confidence 444566667777764 554443
|
|
| >COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.75 E-value=0.5 Score=44.14 Aligned_cols=60 Identities=13% Similarity=0.212 Sum_probs=47.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
.||+++| +|-+|+.++-++...|.. .+.-..--..+..|..|.+++.+.++..+||.||-
T Consensus 13 ~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVAhrs~Vi~MlD~~al~avv~rekPd~IVp 81 (394)
T COG0027 13 TKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHRSYVIDMLDGDALRAVVEREKPDYIVP 81 (394)
T ss_pred eEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhhhheeeeeccCHHHHHHHHHhhCCCeeee
Confidence 4799999 899999999999999874 11111122345689999999999999999999984
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=89.57 E-value=2.4 Score=41.16 Aligned_cols=93 Identities=15% Similarity=0.223 Sum_probs=56.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDF 83 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~ 83 (358)
|++|.|+|+||-||..-++-+.+... +. .+..+.++ .+.+.+.+..+.++|.+|+..-.. . ...
T Consensus 1 mk~VaILGsTGSIG~~tL~vi~~~p~----~f-~VvaLaa~-~n~~~l~~q~~~f~p~~v~i~~~~---------~-~~~ 64 (385)
T PRK05447 1 MKRITILGSTGSIGTQTLDVIRRNPD----RF-RVVALSAG-KNVELLAEQAREFRPKYVVVADEE---------A-AKE 64 (385)
T ss_pred CceEEEEcCChHHHHHHHHHHHhCcc----cc-EEEEEEcC-CCHHHHHHHHHHhCCCEEEEcCHH---------H-HHH
Confidence 46999999999999998888765421 22 22222444 478888888888889887643211 0 011
Q ss_pred HHHH--------HHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 84 FRVN--------MKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 84 ~~~n--------v~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
.+.. ..|...+.+.+....+..+|...+.
T Consensus 65 l~~~l~~~~~~v~~G~~~~~~l~~~~~vD~Vv~Ai~G 101 (385)
T PRK05447 65 LKEALAAAGIEVLAGEEGLCELAALPEADVVVAAIVG 101 (385)
T ss_pred HHHhhccCCceEEEChhHHHHHhcCCCCCEEEEeCcC
Confidence 1111 1245566677766667766654443
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=89.43 E-value=0.28 Score=38.75 Aligned_cols=58 Identities=22% Similarity=0.219 Sum_probs=40.4
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc-----CC------CCceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR-----DD------ETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~-----~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|+|+| .|.+|..|++.|.+.+.+ .. ....++..+.+|.++++.+.++--. +++.||=+
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~-~a~~vv~~ 69 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIE-KADAVVIL 69 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGG-CESEEEEE
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCcc-ccCEEEEc
Confidence 67888 589999999999997642 00 1122355679999999999887544 68888743
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=89.35 E-value=1.4 Score=36.25 Aligned_cols=84 Identities=20% Similarity=0.201 Sum_probs=51.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----CCC------CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----DDE------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~~~------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
++|+++| +| -|.+++..|.+.|++ -+. +...+..+.+|+.+++- ++-+ ++|.|+-+
T Consensus 18 ~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~--~a~liysi------- 84 (134)
T PRK04148 18 KKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYK--NAKLIYSI------- 84 (134)
T ss_pred CEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHh--cCCEEEEe-------
Confidence 5899999 67 898999999998873 000 11123445666666552 2233 36666632
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
..+.+ ....+++.|++.++.-+|..-|.
T Consensus 85 ----rpp~e-------l~~~~~~la~~~~~~~~i~~l~~ 112 (134)
T PRK04148 85 ----RPPRD-------LQPFILELAKKINVPLIIKPLSG 112 (134)
T ss_pred ----CCCHH-------HHHHHHHHHHHcCCCEEEEcCCC
Confidence 23333 44568999999998866654443
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=89.28 E-value=0.99 Score=45.12 Aligned_cols=66 Identities=17% Similarity=0.134 Sum_probs=45.5
Q ss_pred CCEEEEEcC----------------CChhHHHHHHHHHHcccc-----CC---CCceeeecccccCCCHHHHHHHHhc-c
Q psy7590 4 EKIILVTGG----------------TGLVGKAIEKIVKEEEKR-----DD---ETWIFVSSKEADLSNLESTQQLFSK-Y 58 (358)
Q Consensus 4 ~~~VlItGa----------------tG~lG~~l~~~L~~~g~~-----~~---~~~~~~~~~~~Dl~~~~~~~~~~~~-~ 58 (358)
.++||||+| ||..|.+|++++...|.+ .+ .....++. ..+...+++.+++.+ .
T Consensus 256 gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~p~~v~~--i~V~ta~eM~~av~~~~ 333 (475)
T PRK13982 256 GRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLADPQGVKV--IHVESARQMLAAVEAAL 333 (475)
T ss_pred CCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCCCCCCceE--EEecCHHHHHHHHHhhC
Confidence 468999975 689999999999999974 11 11112222 234566666666644 3
Q ss_pred CCcEEEEcccccC
Q psy7590 59 KPTHVIHLAAMVG 71 (358)
Q Consensus 59 ~~d~Vih~a~~~~ 71 (358)
+.|++|++|+..+
T Consensus 334 ~~Di~I~aAAVaD 346 (475)
T PRK13982 334 PADIAIFAAAVAD 346 (475)
T ss_pred CCCEEEEeccccc
Confidence 5799999999865
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=89.05 E-value=5.4 Score=32.55 Aligned_cols=90 Identities=18% Similarity=0.290 Sum_probs=54.8
Q ss_pred EEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHH
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRV 86 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~ 86 (358)
|.|+|+||-||..-++-+.+.. +++..+-. .+ -.+.+.+.+...+++|..|+-.-. ......+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~----d~f~v~~L-sa-~~n~~~L~~q~~~f~p~~v~i~~~----------~~~~~l~~ 64 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHP----DKFEVVAL-SA-GSNIEKLAEQAREFKPKYVVIADE----------EAYEELKK 64 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCT----TTEEEEEE-EE-SSTHHHHHHHHHHHT-SEEEESSH----------HHHHHHHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCC----CceEEEEE-Ec-CCCHHHHHHHHHHhCCCEEEEcCH----------HHHHHHHH
Confidence 6899999999999999888773 22222211 23 368888888888888988873211 11111111
Q ss_pred H----------HHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 87 N----------MKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 87 n----------v~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
. ..|...|.+.+....+..+|...+.
T Consensus 65 ~~~~~~~~~~v~~G~~~l~~~~~~~~~D~vv~Ai~G 100 (129)
T PF02670_consen 65 ALPSKGPGIEVLSGPEGLEELAEEPEVDIVVNAIVG 100 (129)
T ss_dssp HHHHTTSSSEEEESHHHHHHHHTHTT-SEEEE--SS
T ss_pred HhhhcCCCCEEEeChHHHHHHhcCCCCCEEEEeCcc
Confidence 1 2256678888877777777755444
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=89.05 E-value=1.1 Score=38.41 Aligned_cols=54 Identities=19% Similarity=0.274 Sum_probs=38.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
.++|+|+|+++.+|..+++.|.++|. +... .+ ...+++.+.+. ++|+||.+.+.
T Consensus 44 gk~vlViG~G~~~G~~~a~~L~~~g~----~V~v-----~~-r~~~~l~~~l~--~aDiVIsat~~ 97 (168)
T cd01080 44 GKKVVVVGRSNIVGKPLAALLLNRNA----TVTV-----CH-SKTKNLKEHTK--QADIVIVAVGK 97 (168)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCC----EEEE-----EE-CCchhHHHHHh--hCCEEEEcCCC
Confidence 47999999877889999999998864 1111 11 23356777777 59999977554
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=88.90 E-value=1.1 Score=41.80 Aligned_cols=54 Identities=13% Similarity=0.252 Sum_probs=39.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
+.++|+|+|++|.+|+.|+..|+++|. .... ++- ...++.+.+. ++|+||++.+
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~~~ga----tVtv-----~~~-~t~~L~~~~~--~aDIvI~AtG 211 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLLNANA----TVTI-----CHS-RTQNLPELVK--QADIIVGAVG 211 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCCC----EEEE-----EeC-CchhHHHHhc--cCCEEEEccC
Confidence 357999999999999999999998763 1111 121 3445667776 5999999886
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=88.86 E-value=0.42 Score=42.05 Aligned_cols=25 Identities=16% Similarity=0.430 Sum_probs=23.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|+|+|.||+|.+|+++++.|.+.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~ 25 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGL 25 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCC
Confidence 4899999999999999999999987
|
|
| >PRK12767 carbamoyl phosphate synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=88.51 E-value=0.79 Score=43.28 Aligned_cols=60 Identities=22% Similarity=0.124 Sum_probs=36.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc--cc-----CCCCce---eee-cccc-cCCCH---HHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE--KR-----DDETWI---FVS-SKEA-DLSNL---ESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g--~~-----~~~~~~---~~~-~~~~-Dl~~~---~~~~~~~~~~~~d~Vih 65 (358)
||||||||+++.+ .+++.|.+.| ++ ...... ..+ .+.. +..++ +.+.+++++.++|+||-
T Consensus 1 ~~~vLv~g~~~~~--~~~~~l~~~~~g~~vi~~d~~~~~~~~~~~d~~~~~p~~~~~~~~~~l~~~~~~~~id~ii~ 75 (326)
T PRK12767 1 MMNILVTSAGRRV--QLVKALKKSLLKGRVIGADISELAPALYFADKFYVVPKVTDPNYIDRLLDICKKEKIDLLIP 75 (326)
T ss_pred CceEEEecCCccH--HHHHHHHHhccCCEEEEECCCCcchhhHhccCcEecCCCCChhHHHHHHHHHHHhCCCEEEE
Confidence 5699999997666 8999999985 53 111000 011 1112 22333 56667777778999884
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=88.35 E-value=0.46 Score=45.57 Aligned_cols=25 Identities=32% Similarity=0.494 Sum_probs=22.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+||+|+|+||++|++|++.|.++..
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~ 25 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPY 25 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC
Confidence 4899999999999999998887653
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=88.08 E-value=1.3 Score=36.41 Aligned_cols=64 Identities=17% Similarity=0.173 Sum_probs=39.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CCCCceee-ecc---cccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DDETWIFV-SSK---EADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~~~~~-~~~---~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
.++|+|.|+ |-.|+.++..|.+.|.+ +..+...+ +.. .......+++.+.+. ++|+||++.+..
T Consensus 12 ~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~--~~DivI~aT~~~ 86 (135)
T PF01488_consen 12 GKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQ--EADIVINATPSG 86 (135)
T ss_dssp TSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHH--TESEEEE-SSTT
T ss_pred CCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHh--hCCeEEEecCCC
Confidence 469999996 88999999999999863 11111110 001 112233445556666 589999986653
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=88.02 E-value=3.3 Score=38.70 Aligned_cols=24 Identities=25% Similarity=0.307 Sum_probs=21.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||.| .|-+|..+++.|...|.
T Consensus 20 s~VLIvG-~gGLG~EiaKnLalaGV 43 (286)
T cd01491 20 SNVLISG-LGGLGVEIAKNLILAGV 43 (286)
T ss_pred CcEEEEc-CCHHHHHHHHHHHHcCC
Confidence 4899999 57899999999999987
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >TIGR02130 dapB_plant dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=87.94 E-value=2.4 Score=39.19 Aligned_cols=24 Identities=29% Similarity=0.459 Sum_probs=21.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+|+|.|++|-+|+.+++.+.+.+.
T Consensus 2 ~V~V~Ga~GkMG~~v~~av~~~~~ 25 (275)
T TIGR02130 2 QIMVNGCPGKMGKAVAEAADAAGL 25 (275)
T ss_pred eEEEeCCCChHHHHHHHHHhcCCC
Confidence 799999999999999999887543
|
This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome. |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=87.87 E-value=1.8 Score=40.42 Aligned_cols=29 Identities=21% Similarity=0.375 Sum_probs=24.5
Q ss_pred CCC-CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 1 MAE-EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 1 m~~-~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
|+. +++|.|+|+ |.+|..++..|+..|++
T Consensus 1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~~ 30 (286)
T PRK07819 1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGVD 30 (286)
T ss_pred CCCCccEEEEEcc-cHHHHHHHHHHHhCCCE
Confidence 444 458999995 99999999999999983
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.45 E-value=1.1 Score=39.60 Aligned_cols=25 Identities=28% Similarity=0.421 Sum_probs=21.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||++.|.| +|.+|+.|++.|.+.||
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~ 25 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGH 25 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCC
Confidence 45676666 99999999999999987
|
|
| >TIGR01408 Ube1 ubiquitin-activating enzyme E1 | Back alignment and domain information |
|---|
Probab=87.29 E-value=2.9 Score=45.89 Aligned_cols=24 Identities=25% Similarity=0.277 Sum_probs=21.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||.|+ |-+|..+++.|...|.
T Consensus 25 s~VLIiG~-gGLG~EiaKnL~laGV 48 (1008)
T TIGR01408 25 SNVLISGM-GGLGLEIAKNLVLAGV 48 (1008)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCC
Confidence 47999996 5599999999999987
|
This model represents the full length, over a thousand amino acids, of a multicopy family of eukaryotic proteins, many of which are designated ubiquitin-activating enzyme E1. Members have two copies of the ThiF family domain (pfam00899), a repeat found in ubiquitin-activating proteins (pfam02134), and other regions. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=87.19 E-value=0.66 Score=41.42 Aligned_cols=25 Identities=32% Similarity=0.393 Sum_probs=23.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|||.|+||+|.+|..++..|.+.|+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~ 25 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGN 25 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC
Confidence 4899999999999999999999886
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=87.15 E-value=0.71 Score=41.74 Aligned_cols=27 Identities=26% Similarity=0.313 Sum_probs=24.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
||+.+||.|.| +|.+|..++..|++.+
T Consensus 1 ~m~~~kI~iIG-~G~mg~ala~~l~~~~ 27 (245)
T PRK07634 1 MLKKHRILFIG-AGRMAEAIFSGLLKTS 27 (245)
T ss_pred CCCCCeEEEEC-cCHHHHHHHHHHHhCC
Confidence 88888999999 7999999999999876
|
|
| >PRK06395 phosphoribosylamine--glycine ligase; Provisional | Back alignment and domain information |
|---|
Probab=87.12 E-value=1.4 Score=43.70 Aligned_cols=59 Identities=14% Similarity=0.110 Sum_probs=43.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----C--CCCceee--ecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----D--DETWIFV--SSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~--~~~~~~~--~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
|||||+| +|.-...|+..|.+.+.+ . +.....+ .++..|..|.+.+.+++++.++|.||
T Consensus 3 ~kVLvlG-~G~re~al~~~l~~~g~~v~~~~~~~Npg~~~~a~~~~~~~~~d~e~l~~~~~~~~id~Vi 70 (435)
T PRK06395 3 MKVMLVG-SGGREDAIARAIKRSGAILFSVIGHENPSIKKLSKKYLFYDEKDYDLIEDFALKNNVDIVF 70 (435)
T ss_pred eEEEEEC-CcHHHHHHHHHHHhCCCeEEEEECCCChhhhhcccceeecCCCCHHHHHHHHHHhCCCEEE
Confidence 5999999 677778899999988752 1 1111001 23467889999999999988999999
|
|
| >PRK08462 biotin carboxylase; Validated | Back alignment and domain information |
|---|
Probab=86.96 E-value=3 Score=41.39 Aligned_cols=65 Identities=14% Similarity=0.174 Sum_probs=46.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-------CCCCceee----ecccc-------cCCCHHHHHHHHhccCCcEEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-------DDETWIFV----SSKEA-------DLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~~~~~----~~~~~-------Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
+|+||||.| .|.++..+++.+.+.|++ .+.....+ +.+.. +..|.+.+.++.++.++|+|+
T Consensus 3 ~~k~ili~~-~g~~~~~~~~~~~~~G~~~v~~~~~~d~~~~~~~~ad~~~~~~~~~~~~~y~~~~~l~~~~~~~~~D~i~ 81 (445)
T PRK08462 3 EIKRILIAN-RGEIALRAIRTIQEMGKEAIAIYSTADKDALYLKYADAKICIGGAKSSESYLNIPAIISAAEIFEADAIF 81 (445)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEechhhcCCchhhhCCEEEEeCCCchhcccCCHHHHHHHHHHcCCCEEE
Confidence 478999999 699999999999999984 11100100 11111 567788899999888999999
Q ss_pred Eccc
Q psy7590 65 HLAA 68 (358)
Q Consensus 65 h~a~ 68 (358)
-..+
T Consensus 82 pg~g 85 (445)
T PRK08462 82 PGYG 85 (445)
T ss_pred ECCC
Confidence 6654
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=86.71 E-value=5.1 Score=37.64 Aligned_cols=152 Identities=14% Similarity=0.114 Sum_probs=81.8
Q ss_pred EEcCCChhHHHHHHHHHHccccCCCCceee-----ecccccCCCHH-----------HHHHHHhccCCcEEEEcccccCC
Q psy7590 9 VTGGTGLVGKAIEKIVKEEEKRDDETWIFV-----SSKEADLSNLE-----------STQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 9 ItGatG~lG~~l~~~L~~~g~~~~~~~~~~-----~~~~~Dl~~~~-----------~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
|.| .|.+|++++..|+..+......+..+ .-...|+.+.. .--+.++ ++|+||-+|+...
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~--daDivVitag~~r- 76 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGDYSDCK--DADLVVITAGAPQ- 76 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCCHHHHC--CCCEEEECCCCCC-
Confidence 456 59999999999987765210000000 00011111110 0123555 5999999999743
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH-HHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH-AKRMLDVL 150 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~-sK~~~E~~ 150 (358)
....+-.+.++.|+...+.+.+.+.+++.+ .+|.+|-.. ..+..--.......+.. ..|. +.+..-++
T Consensus 77 --k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~-------d~~t~~~~~~sg~p~~~-viG~gt~LDs~R~ 146 (299)
T TIGR01771 77 --KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPV-------DILTYVAWKLSGFPKNR-VIGSGTVLDTARL 146 (299)
T ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHH-------HHHHHHHHHHhCCCHHH-EEeccchHHHHHH
Confidence 222456788999999999999999998865 344444221 00000000000111111 2333 33344455
Q ss_pred HHHHHhhcCceEEEEecCcccCCCC
Q psy7590 151 NKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 151 ~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
....+++.+++...++. .|+|.+.
T Consensus 147 ~~~la~~l~v~~~~V~~-~v~GeHG 170 (299)
T TIGR01771 147 RYLLAEKLGVDPQSVHA-YIIGEHG 170 (299)
T ss_pred HHHHHHHhCcCcCeEEE-EEEecCC
Confidence 55556667777777775 4788764
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=86.29 E-value=5 Score=38.94 Aligned_cols=57 Identities=21% Similarity=0.298 Sum_probs=39.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|++|.|.|+||-||...+.-+.+... ..+...+ .+ =.|.+.+.+....++|.+|+..
T Consensus 1 Mk~i~IlGsTGSIG~qtL~Vi~~~~~--~f~v~~L---aa-~~n~~~L~~q~~~f~p~~v~i~ 57 (389)
T TIGR00243 1 MKQIVILGSTGSIGKSTLDVVRHNPD--HFQVVAL---SA-GKNVALMVEQILEFRPKFVAID 57 (389)
T ss_pred CceEEEEecChHHHHHHHHHHHhCcc--ccEEEEE---Ec-CCCHHHHHHHHHHcCCCEEEEc
Confidence 36899999999999998887765421 1122222 22 2577888888888889988753
|
1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis. |
| >PRK05472 redox-sensing transcriptional repressor Rex; Provisional | Back alignment and domain information |
|---|
Probab=86.28 E-value=6.4 Score=34.91 Aligned_cols=89 Identities=12% Similarity=0.111 Sum_probs=52.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH--cccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKE--EEKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~--~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 75 (358)
..+|+|.| +|.+|.++++.+.. .|++ .......-..-...+...+++.++++..++|.|+-+.....
T Consensus 84 ~~rV~IIG-aG~iG~~l~~~~~~~~~g~~ivgv~D~d~~~~~~~i~g~~v~~~~~l~~li~~~~iD~ViIa~P~~~---- 158 (213)
T PRK05472 84 TWNVALVG-AGNLGRALLNYNGFEKRGFKIVAAFDVDPEKIGTKIGGIPVYHIDELEEVVKENDIEIGILTVPAEA---- 158 (213)
T ss_pred CcEEEEEC-CCHHHHHHHHhhhcccCCcEEEEEEECChhhcCCEeCCeEEcCHHHHHHHHHHCCCCEEEEeCCchh----
Confidence 35899999 79999999987432 2331 11000000000011335577888887767999997644321
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
...+.+.+.++|++.++..+..
T Consensus 159 ---------------~~~i~~~l~~~Gi~~il~~~p~ 180 (213)
T PRK05472 159 ---------------AQEVADRLVEAGIKGILNFAPV 180 (213)
T ss_pred ---------------HHHHHHHHHHcCCCEEeecCce
Confidence 2257788889998766654444
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=86.18 E-value=3.9 Score=38.84 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=23.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
.++|.|+| +|.+|+.++..|+..|++
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~~ 32 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGLD 32 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCe
Confidence 46899999 699999999999999984
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.34 E-value=6 Score=35.48 Aligned_cols=81 Identities=15% Similarity=0.232 Sum_probs=47.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeeccc------------ccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKE------------ADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~------------~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
|+|.|+| +|.||..|++.+.+... ....+-.+. ..-....++.+++. .+|+|+-||+..
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~----~~e~v~v~D~~~ek~~~~~~~~~~~~~s~ide~~~--~~DlvVEaAS~~-- 71 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRV----DFELVAVYDRDEEKAKELEASVGRRCVSDIDELIA--EVDLVVEAASPE-- 71 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCc----ceeEEEEecCCHHHHHHHHhhcCCCccccHHHHhh--ccceeeeeCCHH--
Confidence 3799999 89999999998875521 111110000 01112233444554 589999887753
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
+.+....-+.++|+. +|-+|..
T Consensus 72 -----------------Av~e~~~~~L~~g~d-~iV~SVG 93 (255)
T COG1712 72 -----------------AVREYVPKILKAGID-VIVMSVG 93 (255)
T ss_pred -----------------HHHHHhHHHHhcCCC-EEEEech
Confidence 444566666677774 5556654
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=85.33 E-value=4.3 Score=41.04 Aligned_cols=29 Identities=14% Similarity=0.054 Sum_probs=25.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
|...|+|.|+| +|.+|+.++..|++.|++
T Consensus 1 ~~~i~kIavIG-~G~MG~~iA~~la~~G~~ 29 (495)
T PRK07531 1 MTMIMKAACIG-GGVIGGGWAARFLLAGID 29 (495)
T ss_pred CCCcCEEEEEC-cCHHHHHHHHHHHhCCCe
Confidence 55557999998 799999999999999873
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=85.01 E-value=2.2 Score=39.53 Aligned_cols=23 Identities=30% Similarity=0.541 Sum_probs=20.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
+++|.|.| .|.+|+.+++.|.+.
T Consensus 6 ~irIGIIG-~G~IG~~~a~~L~~~ 28 (271)
T PRK13302 6 ELRVAIAG-LGAIGKAIAQALDRG 28 (271)
T ss_pred eeEEEEEC-ccHHHHHHHHHHHhc
Confidence 36899999 799999999999863
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=85.00 E-value=1.4 Score=35.85 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=21.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+||-|+|+ |-+|.+|.+.|.+.|+
T Consensus 11 l~I~iIGa-GrVG~~La~aL~~ag~ 34 (127)
T PF10727_consen 11 LKIGIIGA-GRVGTALARALARAGH 34 (127)
T ss_dssp -EEEEECT-SCCCCHHHHHHHHTTS
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCC
Confidence 58999995 9999999999999998
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=84.97 E-value=1.8 Score=40.78 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=36.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
+.|+|.|.| +|.+|..+++.|.+.|++ +. ..|-....++.++++ ++|+||-+
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~-------V~--~~~r~~~~~~~~~~~--~advvi~~ 54 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGHR-------VR--VWSRRSGLSLAAVLA--DADVIVSA 54 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCE-------EE--EEeCCCCCCHHHHHh--cCCEEEEE
Confidence 346899998 799999999999999872 11 122222244566666 58999855
|
|
| >PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
Probab=84.74 E-value=2.2 Score=42.44 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=43.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C-CCCce---ee-eccc-------ccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D-DETWI---FV-SSKE-------ADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~-~~~~~---~~-~~~~-------~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
||||||.| +|.+|..+++.+.+.|++ . ..... .. ..+. -++.|.+.+.++.+..++|+|+-
T Consensus 2 ~k~iLi~g-~g~~a~~i~~aa~~~G~~vv~~~~~~d~~a~~~~~ad~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~I~p 80 (451)
T PRK08591 2 FDKILIAN-RGEIALRIIRACKELGIKTVAVHSTADRDALHVQLADEAVCIGPAPSKKSYLNIPAIISAAEITGADAIHP 80 (451)
T ss_pred cceEEEEC-CCHHHHHHHHHHHHcCCeEEEEcChhhccCCCHhHCCEEEEeCCCCcccccCCHHHHHHHHHHhCCCEEEE
Confidence 46999997 799999999999999984 1 11000 01 1111 14557778888887778999985
Q ss_pred ccc
Q psy7590 66 LAA 68 (358)
Q Consensus 66 ~a~ 68 (358)
..+
T Consensus 81 ~~~ 83 (451)
T PRK08591 81 GYG 83 (451)
T ss_pred CCC
Confidence 543
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=84.38 E-value=1.9 Score=36.65 Aligned_cols=56 Identities=16% Similarity=0.275 Sum_probs=37.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
.|+|+|.|.++.+|+-|+..|++++. .+. .++... ..+.+.++ ++|+||-.++...
T Consensus 36 Gk~v~VvGrs~~VG~Pla~lL~~~~a-------tVt--~~h~~T-~~l~~~~~--~ADIVVsa~G~~~ 91 (160)
T PF02882_consen 36 GKKVVVVGRSNIVGKPLAMLLLNKGA-------TVT--ICHSKT-KNLQEITR--RADIVVSAVGKPN 91 (160)
T ss_dssp T-EEEEE-TTTTTHHHHHHHHHHTT--------EEE--EE-TTS-SSHHHHHT--TSSEEEE-SSSTT
T ss_pred CCEEEEECCcCCCChHHHHHHHhCCC-------eEE--eccCCC-Ccccceee--eccEEeeeecccc
Confidence 57999999999999999999998853 111 122221 44566777 5999998877654
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK13197 pyrrolidone-carboxylate peptidase; Provisional | Back alignment and domain information |
|---|
Probab=84.31 E-value=2.3 Score=37.97 Aligned_cols=64 Identities=20% Similarity=0.154 Sum_probs=37.6
Q ss_pred CCEEEEEcCCChhH------HHHHHHHHHccccCCCCceeeecccccCC-CHHHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVG------KAIEKIVKEEEKRDDETWIFVSSKEADLS-NLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG------~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
||+|||||=.-|-| ..+++.|..... .........+.+++. ..+.+.+++++.++|+|||++-.
T Consensus 1 m~~ILvTGF~PF~~~~~NPS~~~~~~L~~~~~--~~~~i~~~~lPV~y~~~~~~l~~~l~~~~Pd~vih~G~a 71 (215)
T PRK13197 1 MMKILVTGFDPFGGEKINPSWEAVKQLPGKEI--GGAEIIKRQLPTVFGKSAEVLKEAIEEVQPDAVICIGQA 71 (215)
T ss_pred CCEEEEeeccCCCCCCCCcHHHHHHHcccccc--CCcEEEEEEECCChHHHHHHHHHHHHHhCCCEEEEeccC
Confidence 46899998766643 455566543321 111122223344542 34566777777789999998654
|
|
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=84.25 E-value=1.9 Score=42.26 Aligned_cols=59 Identities=5% Similarity=-0.027 Sum_probs=43.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----C----CCCceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----D----DETWIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~----~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
.+|+|+| .|.+|+.++++|.++|.+ . .......+.+.+|.+|++.++++--+ +++.||=
T Consensus 241 ~HvII~G-~g~lg~~v~~~L~~~g~~vvVId~d~~~~~~~~g~~vI~GD~td~e~L~~AgI~-~A~aVI~ 308 (393)
T PRK10537 241 DHFIICG-HSPLAINTYLGLRQRGQAVTVIVPLGLEHRLPDDADLIPGDSSDSAVLKKAGAA-RARAILA 308 (393)
T ss_pred CeEEEEC-CChHHHHHHHHHHHCCCCEEEEECchhhhhccCCCcEEEeCCCCHHHHHhcCcc-cCCEEEE
Confidence 3688888 689999999999988763 1 11112345679999999988776544 5888883
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=84.12 E-value=1.3 Score=38.56 Aligned_cols=25 Identities=28% Similarity=0.418 Sum_probs=20.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
|||.|.| .|++|..++..|.+.|++
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~ 25 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQ 25 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSE
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCE
Confidence 5899998 899999999999999983
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK08955 glyceraldehyde-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=83.99 E-value=2.5 Score=40.36 Aligned_cols=23 Identities=13% Similarity=0.117 Sum_probs=20.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g 28 (358)
+||.|.|. |-+|+.+++.+.+++
T Consensus 3 ikigInG~-GRiGr~v~r~~~~~~ 25 (334)
T PRK08955 3 IKVGINGF-GRIGRLALRAAWDWP 25 (334)
T ss_pred eEEEEECc-CHHHHHHHHHHHhCC
Confidence 59999999 999999999988764
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=83.92 E-value=3.4 Score=40.98 Aligned_cols=26 Identities=27% Similarity=0.308 Sum_probs=23.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
.++|+|+|++| +|..+++.|++.|++
T Consensus 5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~ 30 (447)
T PRK02472 5 NKKVLVLGLAK-SGYAAAKLLHKLGAN 30 (447)
T ss_pred CCEEEEEeeCH-HHHHHHHHHHHCCCE
Confidence 46899999988 999999999999873
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=83.86 E-value=3.7 Score=38.23 Aligned_cols=26 Identities=23% Similarity=0.270 Sum_probs=23.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
++++|.|+| +|.+|..++..|...|+
T Consensus 2 ~~~kIaViG-aG~mG~~iA~~la~~G~ 27 (287)
T PRK08293 2 DIKNVTVAG-AGVLGSQIAFQTAFHGF 27 (287)
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhcCC
Confidence 457999999 59999999999998886
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=83.34 E-value=2.1 Score=39.47 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=20.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
||||.|.| .|.+|+.+++.|.+.+
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~ 24 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGR 24 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCC
Confidence 35899999 6999999999998753
|
|
| >TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein | Back alignment and domain information |
|---|
Probab=83.24 E-value=4.8 Score=41.37 Aligned_cols=93 Identities=11% Similarity=0.027 Sum_probs=59.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCC-----------C------------CceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDD-----------E------------TWIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~-----------~------------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
.||+|.| .|-+|++|+..|+..|.... . ....+.+...+..+.+++.+.++ +.|
T Consensus 130 akVlVlG-~Gg~~s~lv~sL~~sG~~~I~~vd~D~v~SNlnRIgEl~e~A~~~n~~v~v~~i~~~~~~dl~ev~~--~~D 206 (637)
T TIGR03693 130 AKILAAG-SGDFLTKLVRSLIDSGFPRFHAIVTDAEEHALDRIHELAEIAEETDDALLVQEIDFAEDQHLHEAFE--PAD 206 (637)
T ss_pred ccEEEEe-cCchHHHHHHHHHhcCCCcEEEEeccccchhhhHHHHHHHHHHHhCCCCceEeccCCcchhHHHhhc--CCc
Confidence 4899999 78889999999999997300 0 01122222344566788888888 589
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC--EEEEeeccceec
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK--KVVSCLSTCIFP 116 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~--r~V~~SS~~vy~ 116 (358)
+||+++-... ......+.++|.+.+.. -++..++....|
T Consensus 207 iVi~vsDdy~----------------~~~Lr~lN~acvkegk~~IPai~~G~~~liG 247 (637)
T TIGR03693 207 WVLYVSDNGD----------------IDDLHALHAFCKEEGKGFIPAICLKQVGLAG 247 (637)
T ss_pred EEEEECCCCC----------------hHHHHHHHHHHHHcCCCeEEEEEcccceeec
Confidence 9998755321 23455677899988833 244444444443
|
Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein. |
| >TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit | Back alignment and domain information |
|---|
Probab=83.18 E-value=3.1 Score=41.43 Aligned_cols=64 Identities=13% Similarity=0.046 Sum_probs=43.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----C--CCCcee---ee-ccc-------ccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----D--DETWIF---VS-SKE-------ADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~--~~~~~~---~~-~~~-------~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
|+||||.| .|.++.-+++.+.+.|++ . ...... .+ .+. -+..|.+.+.++..+.++|+|+-
T Consensus 2 ~kkili~g-~g~~~~~~~~aa~~lG~~vv~~~~~~d~~a~~~~~aD~~~~~~~~~~~~~y~d~~~l~~~a~~~~id~I~p 80 (449)
T TIGR00514 2 LDKILIAN-RGEIALRILRACKELGIKTVAVHSTADRDALHVLLADEAVCIGPAPSAKSYLNIPNIISAAEITGADAIHP 80 (449)
T ss_pred cceEEEeC-CCHHHHHHHHHHHHcCCeEEEEEChhhhcccccccCCEEEEcCCCCchhchhCHHHHHHHHHHhCCCEEEe
Confidence 45999997 799999999999999984 1 111111 11 111 14556677888877778999986
Q ss_pred ccc
Q psy7590 66 LAA 68 (358)
Q Consensus 66 ~a~ 68 (358)
..+
T Consensus 81 g~g 83 (449)
T TIGR00514 81 GYG 83 (449)
T ss_pred CCC
Confidence 543
|
This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification. |
| >PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below) | Back alignment and domain information |
|---|
Probab=83.09 E-value=4.5 Score=31.99 Aligned_cols=59 Identities=15% Similarity=0.211 Sum_probs=39.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C----------CCCceeee--cccccCCCHHHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D----------DETWIFVS--SKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~----------~~~~~~~~--~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
+||||.| .|-++..+++.+.+.|++ . .++...++ .-.-...+.+.+.++.+..++|.++
T Consensus 3 kkvLIan-rGeia~r~~ra~r~~Gi~tv~v~s~~d~~s~~~~~ad~~~~~~~~~~~~~yl~~e~I~~ia~~~g~~~i~ 79 (110)
T PF00289_consen 3 KKVLIAN-RGEIAVRIIRALRELGIETVAVNSNPDTVSTHVDMADEAYFEPPGPSPESYLNIEAIIDIARKEGADAIH 79 (110)
T ss_dssp SEEEESS--HHHHHHHHHHHHHTTSEEEEEEEGGGTTGHHHHHSSEEEEEESSSGGGTTTSHHHHHHHHHHTTESEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHhCCcceeccCchhcccccccccccceecCcchhhhhhccHHHHhhHhhhhcCcccc
Confidence 4899999 899999999999999984 0 11111111 0111345778888888877888876
|
CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A .... |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=83.09 E-value=1 Score=46.13 Aligned_cols=57 Identities=14% Similarity=0.043 Sum_probs=43.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc-----CC------CCceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR-----DD------ETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~-----~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
+|+|+| .|.+|+++++.|.++|++ .+ .+..+.+.+.+|.+|++.++++--+ ++|+|+
T Consensus 419 hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~-~a~~vi 486 (558)
T PRK10669 419 HALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLD-CARWLL 486 (558)
T ss_pred CEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCcc-ccCEEE
Confidence 688998 799999999999999874 11 1123456679999999988776543 588777
|
|
| >PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated | Back alignment and domain information |
|---|
Probab=82.85 E-value=3 Score=41.44 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=43.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----CCCC--cee---ee-c-------ccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----DDET--WIF---VS-S-------KEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~--~~~---~~-~-------~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
+||||.| +|.+|..+++.+.+.|++ +... ... .+ . ...|..|.+.+.+++++.++|+|+-.
T Consensus 3 ~~ililg-~g~~~~~~~~~a~~lG~~~v~~~~~~~~~a~~~~~ad~~~~~~~~~~~~~~~d~~~l~~~~~~~~id~I~p~ 81 (450)
T PRK06111 3 QKVLIAN-RGEIAVRIIRTCQKLGIRTVAIYSEADRDALHVKMADEAYLIGGPRVQESYLNLEKIIEIAKKTGAEAIHPG 81 (450)
T ss_pred ceEEEEC-CcHHHHHHHHHHHHcCCeEEEEechhhccCcchhhCCEEEEcCCCCccccccCHHHHHHHHHHhCCCEEEeC
Confidence 5999999 799999999999999984 1110 000 11 1 12466788889999988889998843
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=82.83 E-value=8.1 Score=36.24 Aligned_cols=27 Identities=26% Similarity=0.463 Sum_probs=22.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
..+|+|.||+|-+|+-..+.-+-.|.|
T Consensus 151 GetvvVSaAaGaVGsvvgQiAKlkG~r 177 (340)
T COG2130 151 GETVVVSAAAGAVGSVVGQIAKLKGCR 177 (340)
T ss_pred CCEEEEEecccccchHHHHHHHhhCCe
Confidence 458999999999999888777767775
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.44 E-value=4.1 Score=37.95 Aligned_cols=25 Identities=24% Similarity=0.441 Sum_probs=22.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+++|+|.| .|.+|.++++.|.+.|+
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~ 27 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGL 27 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCC
Confidence 45788887 99999999999999997
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=82.38 E-value=3.5 Score=38.44 Aligned_cols=55 Identities=11% Similarity=0.231 Sum_probs=39.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
.++|+|+|.++.+|+-++..|+++|. ....+ +- ....+.+.+. ++|+||...+..
T Consensus 158 Gk~vvVIGrs~~VG~pla~lL~~~ga----tVtv~-----~s-~t~~l~~~~~--~ADIVIsAvg~p 212 (286)
T PRK14175 158 GKNAVVIGRSHIVGQPVSKLLLQKNA----SVTIL-----HS-RSKDMASYLK--DADVIVSAVGKP 212 (286)
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCC----eEEEE-----eC-CchhHHHHHh--hCCEEEECCCCC
Confidence 47999999999999999999998753 11111 11 2245677777 599999877654
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=82.33 E-value=16 Score=32.07 Aligned_cols=24 Identities=13% Similarity=0.185 Sum_probs=21.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.|+ |-+|+.++..|...|.
T Consensus 22 ~~V~IvG~-GglGs~ia~~La~~Gv 45 (200)
T TIGR02354 22 ATVAICGL-GGLGSNVAINLARAGI 45 (200)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCC
Confidence 58999995 7799999999999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=81.89 E-value=2.8 Score=43.47 Aligned_cols=60 Identities=17% Similarity=0.200 Sum_probs=44.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-----CceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
++|+|+| .|.+|+.+++.|.++|++ ++. +..+.+.+.||.++++.++++=-+ +++.||-+
T Consensus 401 ~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~-~A~~vv~~ 471 (601)
T PRK03659 401 PQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAE-KAEAIVIT 471 (601)
T ss_pred CCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCc-cCCEEEEE
Confidence 4788998 799999999999998874 111 123455679999999988776433 58888843
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=81.79 E-value=15 Score=34.45 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=56.6
Q ss_pred EEEEcCCChhHHHHHHHHHHccc-c------CCCCceee--ecc--------cccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEK-R------DDETWIFV--SSK--------EADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~-~------~~~~~~~~--~~~--------~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
|.|+|+ |.+|..++..|...+. . ........ +.. ...+....+. +.+. ++|+||-+++.
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~-~~l~--dADiVIit~g~ 76 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDY-EDIA--GSDVVVITAGI 76 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCH-HHhC--CCCEEEEecCC
Confidence 578997 9999999998887764 1 10000000 000 0011000112 2344 59999999886
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEE-EEee
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV-VSCL 110 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~-V~~S 110 (358)
.. .......+....|+...+.+++...+...+.. |.+|
T Consensus 77 p~---~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 77 PR---KPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred CC---CcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 53 12234445677899999999999988875533 4333
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional | Back alignment and domain information |
|---|
Probab=81.66 E-value=3.6 Score=41.28 Aligned_cols=62 Identities=13% Similarity=0.098 Sum_probs=43.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----C--CCCce---eee-cc-cc------cCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----D--DETWI---FVS-SK-EA------DLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~--~~~~~---~~~-~~-~~------Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
|+||||.| .|.++..+++.+.+.|++ + +.... ..+ .+ .+ |..|.+.+.++.+..++|+|+=
T Consensus 5 ~~~vLi~~-~geia~~ii~aa~~lG~~~v~~~s~~d~~~~~~~~aD~~~~i~p~~~~~~y~d~~~i~~~a~~~~~daI~p 83 (467)
T PRK12833 5 IRKVLVAN-RGEIAVRIIRAARELGMRTVAACSDADRDSLAARMADEAVHIGPSHAAKSYLNPAAILAAARQCGADAIHP 83 (467)
T ss_pred CcEEEEEC-CcHHHHHHHHHHHHcCCeEEEEECCCCCCChhHHhCCEEEecCCCCccccccCHHHHHHHHHHhCCCEEEE
Confidence 45899999 699999999999999984 1 11101 111 11 12 6678888999998888998884
Q ss_pred c
Q psy7590 66 L 66 (358)
Q Consensus 66 ~ 66 (358)
.
T Consensus 84 g 84 (467)
T PRK12833 84 G 84 (467)
T ss_pred C
Confidence 3
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=81.61 E-value=1.7 Score=40.53 Aligned_cols=28 Identities=32% Similarity=0.449 Sum_probs=26.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|+.+++|.|+| .|.+|..|+..|+..|+
T Consensus 1 ~~~~~~V~vIG-~G~mG~~iA~~l~~~G~ 28 (295)
T PLN02545 1 MAEIKKVGVVG-AGQMGSGIAQLAAAAGM 28 (295)
T ss_pred CCCcCEEEEEC-CCHHHHHHHHHHHhcCC
Confidence 88888999999 69999999999999986
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=81.61 E-value=1.8 Score=40.42 Aligned_cols=61 Identities=15% Similarity=0.112 Sum_probs=37.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.++|+|+|. |.+|+.+++.|...|.+ ..................+++.+.+. ++|+||++.
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~--~aDiVint~ 217 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPFPLNKLEEKVA--EIDIVINTI 217 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhc--cCCEEEECC
Confidence 468999995 88999999999998852 11000000000011123345666666 599999874
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=81.56 E-value=10 Score=36.17 Aligned_cols=22 Identities=18% Similarity=0.394 Sum_probs=19.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHcc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g 28 (358)
||.|.|. |.||+.+++.|.+.+
T Consensus 1 ~IaInGf-GrIGR~vlr~l~e~~ 22 (325)
T TIGR01532 1 RVAINGF-GRIGRNVLRALYESG 22 (325)
T ss_pred CEEEECC-CHHHHHHHHHHHhcC
Confidence 5899998 999999999999764
|
Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species. |
| >PRK07178 pyruvate carboxylase subunit A; Validated | Back alignment and domain information |
|---|
Probab=81.05 E-value=4 Score=41.00 Aligned_cols=61 Identities=20% Similarity=0.100 Sum_probs=42.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------CCCCceee---e-cc------cccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------DDETWIFV---S-SK------EADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~~~~~---~-~~------~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
+||||.| .|.+|..+++.+.+.|++ .......+ + .+ ..+..|.+.+.++.++.++|+|+-.
T Consensus 3 ~kvLi~~-~geia~~ii~a~~~~Gi~~v~v~~~~d~~a~~~~~aD~~~~i~~~~~~~y~d~~~i~~~a~~~~~D~I~pg 80 (472)
T PRK07178 3 KKILIAN-RGEIAVRIVRACAEMGIRSVAIYSEADRHALHVKRADEAYSIGADPLAGYLNPRRLVNLAVETGCDALHPG 80 (472)
T ss_pred cEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCCCccCCccHhhCCEEEEcCCCchhhhcCHHHHHHHHHHHCCCEEEeC
Confidence 5999997 899999999999999984 11100111 0 00 1245677888888887789998853
|
|
| >PRK13195 pyrrolidone-carboxylate peptidase; Provisional | Back alignment and domain information |
|---|
Probab=80.53 E-value=3.5 Score=36.94 Aligned_cols=65 Identities=18% Similarity=0.120 Sum_probs=36.5
Q ss_pred CCEEEEEcCCChhH------HHHHHHHHHccccCCCCceeeecccccCC-CHHHHHHHHhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVG------KAIEKIVKEEEKRDDETWIFVSSKEADLS-NLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG------~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
||+|||||=.=|-| +.+++.|..... ....... ..+..++. ..+.+.+++++++||+|||++-..
T Consensus 1 m~~ILvTGF~PFgg~~~NPS~~~v~~L~~~~~-~~~~v~~-~~lPv~f~~~~~~l~~~i~~~~Pd~Vi~~G~a~ 72 (222)
T PRK13195 1 MSKVLVTGFGPYGVTPVNPAQLTAEELDGRTI-AGATVIS-RIVPNTFFESIAAAQQAIAEIEPALVIMLGEYP 72 (222)
T ss_pred CCEEEEeeecCCCCCCcCchHHHHHhcccccc-CCeEEEE-EEeCeEehHHHHHHHHHHHHHCCCEEEEeCccC
Confidence 46899999665554 345555533211 0011111 12233432 345778888888999999986543
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=80.47 E-value=2 Score=40.31 Aligned_cols=61 Identities=13% Similarity=0.119 Sum_probs=37.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.++|+|+|. |.+|..++..|...|.+ ..................+++.+.+. ++|+||++.
T Consensus 152 g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~--~aDiVI~t~ 218 (296)
T PRK08306 152 GSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFHLSELAEEVG--KIDIIFNTI 218 (296)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhC--CCCEEEECC
Confidence 468999995 88999999999998852 10000000001111123345566666 599999974
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=80.09 E-value=2.1 Score=39.91 Aligned_cols=28 Identities=25% Similarity=0.321 Sum_probs=25.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||+.++|.|+| .|.+|..++..|+..|+
T Consensus 1 ~~~~~kI~vIG-aG~mG~~iA~~la~~G~ 28 (292)
T PRK07530 1 MMAIKKVGVIG-AGQMGNGIAHVCALAGY 28 (292)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHCCC
Confidence 78888999999 59999999999999987
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 358 | ||||
| 4b8z_A | 320 | Crystal Structure Of Human Gdp-l-fucose Synthase Wi | 1e-107 | ||
| 4b8w_A | 319 | Crystal Structure Of Human Gdp-L-Fucose Synthase Wi | 1e-107 | ||
| 1e6u_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Le | 1e-27 | ||
| 1e7q_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S1 | 3e-27 | ||
| 1bsv_A | 321 | Gdp-Fucose Synthetase From Escherichia Coli Complex | 5e-27 | ||
| 1bws_A | 321 | Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose E | 6e-27 | ||
| 1e7s_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K1 | 8e-27 | ||
| 1e7r_A | 321 | Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y1 | 4e-26 | ||
| 1i3k_A | 348 | Molecular Basis For Severe Epimerase-Deficiency Gal | 1e-05 | ||
| 1ek5_A | 348 | Structure Of Human Udp-Galactose 4-Epimerase In Com | 2e-05 | ||
| 1hzj_A | 348 | Human Udp-Galactose 4-Epimerase: Accommodation Of U | 2e-05 | ||
| 2p5u_A | 311 | Crystal Structure Of Thermus Thermophilus Hb8 Udp-G | 2e-05 |
| >pdb|4B8Z|A Chain A, Crystal Structure Of Human Gdp-l-fucose Synthase With Bound Nadp And Gdp, Rhombohedral Crystal Form Length = 320 | Back alignment and structure |
|
| >pdb|4B8W|A Chain A, Crystal Structure Of Human Gdp-L-Fucose Synthase With Bound Nadp And Gdp, Tetragonal Crystal Form Length = 319 | Back alignment and structure |
|
| >pdb|1E6U|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Length = 321 | Back alignment and structure |
|
| >pdb|1E7Q|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase S107a Length = 321 | Back alignment and structure |
|
| >pdb|1BSV|A Chain A, Gdp-Fucose Synthetase From Escherichia Coli Complex With Nadph Length = 321 | Back alignment and structure |
|
| >pdb|1BWS|A Chain A, Crystal Structure Of Gdp-4-Keto-6-Deoxy-D-Mannose EpimeraseREDUCTASE From Escherichia Coli A Key Enzyme In The Biosynthesis Of Gdp-L- Fucose Length = 321 | Back alignment and structure |
|
| >pdb|1E7S|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase K140r Length = 321 | Back alignment and structure |
|
| >pdb|1E7R|A Chain A, Gdp 4-Keto-6-Deoxy-D-Mannose Epimerase Reductase Y136e Length = 321 | Back alignment and structure |
|
| >pdb|1I3K|A Chain A, Molecular Basis For Severe Epimerase-Deficiency Galactosemia: X-Ray Structure Of The Human V94m- Substituted Udp-Galactose 4-Epimerase Length = 348 | Back alignment and structure |
|
| >pdb|1EK5|A Chain A, Structure Of Human Udp-Galactose 4-Epimerase In Complex With Nad+ Length = 348 | Back alignment and structure |
|
| >pdb|1HZJ|A Chain A, Human Udp-Galactose 4-Epimerase: Accommodation Of Udp-N- Acetylglucosamine Within The Active Site Length = 348 | Back alignment and structure |
|
| >pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* Length = 321 | Back alignment and structure |
|---|
Score = 247 bits (632), Expect = 3e-80
Identities = 95/365 (26%), Positives = 164/365 (44%), Gaps = 53/365 (14%)
Query: 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
MA++++ + G G+VG AI ++ E+R D + + E +L + + F+ +
Sbjct: 1 MAKQRV-FIAGHRGMVGSAI---RRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERI 56
Query: 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT 120
V AA VGG+ N ++ DF NM I N++ +++ V K++ S+CI+P
Sbjct: 57 DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAK 116
Query: 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE 180
P+ E+ + G P+N Y+ AK L ++Y +Q+G Y SV+P N++GPHDN++
Sbjct: 117 QPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPS 176
Query: 181 SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDE 240
+SHVIP L+R+ ++ + +
Sbjct: 177 NSHVIPALLRRFHEATAQKA--------------------------------------PD 198
Query: 241 FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEK-------DEVTIAEVAE 293
V G+G P+R+F++ D+A I V+ V + TI E+A+
Sbjct: 199 VVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQ 258
Query: 294 AIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFREN 352
IA +KGR+ FD + DG +K +L +L G+ + + + WF EN
Sbjct: 259 TIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQL---GWYHEISLEAGLASTYQWFLEN 315
Query: 353 HSVAR 357
R
Sbjct: 316 QDRFR 320
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 5e-39
Identities = 65/368 (17%), Positives = 126/368 (34%), Gaps = 68/368 (18%)
Query: 1 MAEEKIILVTGGTGLVGKAI-EKIVKE---------EEKRDDETWIFVSSKE-ADLSNLE 49
+E I +TG G + I ++ E ++ +F DL +E
Sbjct: 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVME 85
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ ++ HV +LAA +GG+ S++ N I+ N+++ + G+K+
Sbjct: 86 NCLKVTEG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFF-Y 142
Query: 110 LST-CIFPDKTTYPIDETMVHNGPPHPSNF--GYSHAKRMLDVLNKAYYQQHGVTYTSVI 166
S+ CI+P+ + P+ + K + L K Y + G+
Sbjct: 143 ASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGR 202
Query: 167 PCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226
N++GP + RK
Sbjct: 203 FHNIYGPFGTWKGGREKAPAAFCRK----------------------------------- 227
Query: 227 PFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEV 286
T D F++ G G R F + + + L + D EP+ + DE V
Sbjct: 228 -------AQTSTDRFEMWGDGLQTRSFTFIDECVEG-VLRLTKSDFREPVNIGSDE--MV 277
Query: 287 TIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRG--PGFEFTPFQQAVQE 344
++ E+AE + + + K I +G + + N ++E G P ++ ++
Sbjct: 278 SMNEMAEMVLSFEEKKLPIHH-IPGPEGVRGRNSDNNLIKEKLGWAPN---MRLKEGLRI 333
Query: 345 SVAWFREN 352
+ W +E
Sbjct: 334 TYFWIKEQ 341
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-24
Identities = 64/366 (17%), Positives = 126/366 (34%), Gaps = 82/366 (22%)
Query: 7 ILVTGGTGLVGKAI-EKIVKEEEKR---DDETWIFVSSK-----EADLSNLESTQQLFSK 57
I VTGGTG +G+ + E I + + +K E +S+ +
Sbjct: 5 IAVTGGTGFLGQYVVESIKNDGNTPIILTR----SIGNKAINDYEYRVSDYTLEDLINQL 60
Query: 58 YKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPD 117
V+HLAA G + F N + N+ D Y+ + +V + + D
Sbjct: 61 NDVDAVVHLAATRG-----SQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSD 115
Query: 118 KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNY 177
+T+ P +E P P Y +K + + Y ++ G+ ++ +++G ++
Sbjct: 116 ETSLPWNEKE----LPLPDLM-YGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKN 170
Query: 178 NLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTG 237
N +I R+ +
Sbjct: 171 NY----MINRFFRQAFH------------------------------------------- 183
Query: 238 GDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIAN 297
G++ + R+F+Y+ D A+ I+ L++ ++ D +T EVA I N
Sbjct: 184 GEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSG--TFNIGSGDALTNYEVANTINN 241
Query: 298 AFQFKGRITFDTNAADGQLKKT-ASNRKLRELRG--PGF-------EFTPFQQAVQESVA 347
AF K + A+ + + + K +EL + E + + +
Sbjct: 242 AFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLLMRGLDDVPL 301
Query: 348 WFRENH 353
W+ +H
Sbjct: 302 WYEGHH 307
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 3e-23
Identities = 47/372 (12%), Positives = 112/372 (30%), Gaps = 83/372 (22%)
Query: 6 IILVTGGTGLVG-KAIEKIVKE------------EEKRDDETWIFVSSKEADLSNLESTQ 52
+ILVTG +G +G + + + ++ + +I D+SN +
Sbjct: 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFI-----TLDVSNRDEID 55
Query: 53 QLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112
+ KY + HLA ++ ++VNM N+L+ + + V+KVV +
Sbjct: 56 RAVEKYSIDAIFHLAGILSA--KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTI 113
Query: 113 CIF-PDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVF 171
+F P+ + P + K ++L + YY++ G+ S+ +
Sbjct: 114 GVFGPETPKNKVPSIT----ITRPRTM-FGVTKIAAELLGQYYYEKFGLDVRSLRYPGII 168
Query: 172 GPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLF 231
++ +
Sbjct: 169 SYKAEPTAGTTDYAVEIFYYA--------------------------------------- 189
Query: 232 PFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSV--DEKDEVTIA 289
+++K +Y D + + + E D + ++ + T +
Sbjct: 190 ----VKREKYKCYLAPNRALPMMYMPDALKALVDLY-EADRDKLVLRNGYNVTAYTFTPS 244
Query: 290 EVAEAIANAFQFKGRITFDTNAAD---GQLKKTASNRKLRELRGPGFEFTP---FQQAVQ 343
E+ I + I + + D ++ + + G F+ + +
Sbjct: 245 ELYSKIKERIP-EFEIEYKEDFRDKIAATWPESLDSSEASNEWG----FSIEYDLDRTID 299
Query: 344 ESVAWFRENHSV 355
+ + E +
Sbjct: 300 DMIDHISEKLGI 311
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 6e-23
Identities = 47/380 (12%), Positives = 94/380 (24%), Gaps = 92/380 (24%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV--SSK------------EADLSNLESTQ 52
V G TGL+G + + + SS+ A++ + +
Sbjct: 16 YAVLGATGLLGHH---AARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLE 72
Query: 53 QLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112
+ VI A + + + + V +++ +
Sbjct: 73 RALRGL--DGVIFSAGYYP---SRPRRWQEEVASALGQTNPFYAACLQARVPRILYV-GS 126
Query: 113 C--IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRM--LDVLNKAYYQQHGVTYTSVIPC 168
+ P E + ++ P + Y K ++G+ IP
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKS-SYVLCKWALDEQARE---QARNGLPVVIGIPG 182
Query: 169 NVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPF 228
V G D I ++ I G+
Sbjct: 183 MVLGELD---------IGPTTGRVITAIGNGE---------------------------- 205
Query: 229 SLFPFCFTGGDEF-----------KVLGTGKPLRQFIYS---LDLARLFIWVLREYDSVE 274
G L G+ +++ + L++A L +
Sbjct: 206 --MTHYVAGQRNVIDAAEAGRGLLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPA 263
Query: 275 PIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRK-LRELRGPGF 333
P +S+ +A + + + RK EL GF
Sbjct: 264 PQPMSM--AMARALATLGRLRYRVSGQLPLLDETA-IEVMAGGQFLDGRKAREEL---GF 317
Query: 334 -EFTPFQQAVQESVAWFREN 352
T + ++ WFR+N
Sbjct: 318 FSTTALDDTLLRAIDWFRDN 337
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 93.7 bits (234), Expect = 6e-22
Identities = 71/367 (19%), Positives = 127/367 (34%), Gaps = 89/367 (24%)
Query: 7 ILVTGGTGLVG-KAIEKIVKEEE----------KRD--DETWIFVSSKEADLSNLESTQQ 53
I+VTGG G +G ++K+ + E + +E V +ADL+ +
Sbjct: 4 IVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLV---KADLAADDIKDY 60
Query: 54 LFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV-SCL 110
L V H+AA V + + +R N+ +L+ K GV ++V +
Sbjct: 61 LK---GAEEVWHIAANPDVR---IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFT-- 112
Query: 111 STC-IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
ST ++ + P E P HP + Y +K + L ++Y + N
Sbjct: 113 STSTVYGEAKVIPTPEDY----PTHPISL-YGASKLACEALIESYCHTFDMQAWIYRFAN 167
Query: 170 VFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229
V G + VI I KL
Sbjct: 168 VIGRRSTH-----GVIYDFIMKL------------------------------------- 185
Query: 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289
+E ++LG G+ + +IY D ++ LR + V + + D++ +
Sbjct: 186 -----KRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNIGSE--DQIKVK 238
Query: 290 EVAEAIANAFQFKGRITF--DTNAADGQLKKT-ASNRKLRELRGPGFE-FTPFQQAVQES 345
+AE + R F G + S KL+ L G++ ++AV+ +
Sbjct: 239 RIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLKRL---GWKPRYNSEEAVRMA 295
Query: 346 VAWFREN 352
V E+
Sbjct: 296 VRDLVED 302
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 4e-19
Identities = 53/384 (13%), Positives = 121/384 (31%), Gaps = 89/384 (23%)
Query: 2 AEEKIILVTGGTGLVG-------------------------KAIEKIVKEEEKRDDETWI 36
A+ K+ L+TG G +G + ++++ ++ +
Sbjct: 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 84
Query: 37 FVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLD 96
F+ + D+ NL+ + +V+H AA+ G + +++ + N+ N+L
Sbjct: 85 FI---QGDIRNLDDCNNACAG--VDYVLHQAAL-GSVPRSINDPITSNATNIDGFLNMLI 138
Query: 97 TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156
+ V+ S+ + D P E P + Y+ K + ++ + +
Sbjct: 139 AARDAKVQSFTYAASSSTYGDHPGLPKVEDT----IGKPLSP-YAVTKYVNELYADVFSR 193
Query: 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216
+G + + NVFG + N + VIP +
Sbjct: 194 CYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ---------------------- 231
Query: 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPI 276
GD+ + G G+ R F Y + + +
Sbjct: 232 ---------------------GDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQ 270
Query: 277 ILSVDEKDEVTIAEVAEAIANAFQFKGRITFD----TNAADGQLKKT-ASNRKLRELRG- 330
+ ++ ++ ++ A+ + G + +G ++ + A K +L G
Sbjct: 271 VYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGY 330
Query: 331 -PGFEFTPFQQAVQESVAWFRENH 353
P V ++ W+
Sbjct: 331 APK---YDVSAGVALAMPWYIMFL 351
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 1e-18
Identities = 78/372 (20%), Positives = 137/372 (36%), Gaps = 90/372 (24%)
Query: 7 ILVTGGTGLVG--------KAIEKIV--------KEEEKRDDETWIFVSSKEADLSNLES 50
+LVTGG G +G ++ K E + DL + E
Sbjct: 3 VLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFF-----RVDLRDKEG 57
Query: 51 TQQLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV- 107
++ F +++PTHV H AA V ++ + F VN+ N+L+ + GV+K+V
Sbjct: 58 VERAFREFRPTHVSHQAAQASVK---VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVF 114
Query: 108 SCLSTC-----IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTY 162
+ ST P+ +ET PP P + Y+ +K + Y Q +G+ +
Sbjct: 115 A--STGGAIYGEVPEGE--RAEETW----PPRPKSP-YAASKAAFEHYLSVYGQSYGLKW 165
Query: 163 TSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222
S+ NV+GP + + E + V+ ++ KG ++ +
Sbjct: 166 VSLRYGNVYGPRQDPHGE-AGVVAIFAERVL----KGLPVTL-------------YARK- 206
Query: 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE 282
T GD +R ++Y D+A L + + +V
Sbjct: 207 -------------TPGD-------EGCVRDYVYVGDVAEAHALALFSLEGI----YNVGT 242
Query: 283 KDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKT-ASNRKLRELRGPGFE-FTPFQQ 340
+ T EV A+A A + G L+++ S KL G+ FQ+
Sbjct: 243 GEGHTTREVLMAVAEAAGKAPEVQP-APPRPGDLERSVLSPLKLMAH---GWRPKVGFQE 298
Query: 341 AVQESVAWFREN 352
++ +V FR
Sbjct: 299 GIRLTVDHFRGA 310
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-18
Identities = 59/370 (15%), Positives = 112/370 (30%), Gaps = 71/370 (19%)
Query: 7 ILVTGGTGLVGKAI-EKIVKEEEKR----------------DDETWIFVSSKEADLSNLE 49
++V GG G VG + +++++ + D F E +++
Sbjct: 35 VMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFS---ETSITDDA 91
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYK-QGVKKVVS 108
L + +V HLA G ++ L N + + + +KKVV
Sbjct: 92 LLASLQDE--YDYVFHLATY-HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVY 148
Query: 109 CLSTCIF--PDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVI 166
+ C E + + YS +K + + Y++QH +
Sbjct: 149 SAAGCSIAEKTFDDAKATEETDIVSLHNNDSP-YSMSKIFGEFYSVYYHKQHQLPTVRAR 207
Query: 167 PCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226
NV+GP + + R R P +
Sbjct: 208 FQNVYGPG---------------------------EILGAGRWRGTPATVWRNV------ 234
Query: 227 PFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEV 286
F + G + G R FI+ D+A I + ++ + E
Sbjct: 235 -TPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTPGGVYNIASGK--ET 291
Query: 287 TIAEVAEAIANAFQFKGRITFDTN-AADGQLKKTASNRKLRELRGPGFEFTP---FQQAV 342
+IA++A I + D K+ S K R G F+ +
Sbjct: 292 SIADLATKINEITGNNTELDRLPKRPWDNSGKRFGSPEKARRELG----FSADVSIDDGL 347
Query: 343 QESVAWFREN 352
++++ W + N
Sbjct: 348 RKTIEWTKAN 357
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 82.6 bits (205), Expect = 5e-18
Identities = 74/375 (19%), Positives = 129/375 (34%), Gaps = 97/375 (25%)
Query: 7 ILVTGGTGLVG-KAIEKIVKEEE-----------KRD--DETWIFVSSKEADLSNLESTQ 52
I+VTGG G +G ++K+V+ +R+ + + DL +
Sbjct: 3 IVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELH---VRDLKDYS--- 56
Query: 53 QLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV-SC 109
+ K V H AA V + + + F N+ NVL+ + + GV+ VV +
Sbjct: 57 -WGAGIKGDVVFHFAANPEVR---LSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFA- 111
Query: 110 LSTC-IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPC 168
S+ ++ D P E P P + Y AK +V+ Y + GV +V
Sbjct: 112 -SSSTVYGDADVIPTPEEE----PYKPISV-YGAAKAAGEVMCATYARLFGVRCLAVRYA 165
Query: 169 NVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPF 228
NV GP + VI I KL
Sbjct: 166 NVVGPRLRHG-----VIYDFIMKL------------------------------------ 184
Query: 229 SLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLR--EYDSVEPIILSVDEKDEV 286
+ +VLG G + ++Y D + + E + L+V D V
Sbjct: 185 ------RRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAV 238
Query: 287 TIAEVAEAIANAFQFKGRITFDTNAADGQLKK------TASNRKLRELRGPGFEFTP--- 337
+ ++A+ +A + I + DG+ T + KL +L G + P
Sbjct: 239 RVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTG----WRPTMT 294
Query: 338 FQQAVQESVAWFREN 352
+AV+++ +
Sbjct: 295 SAEAVKKTAEDLAKE 309
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 1e-17
Identities = 36/203 (17%), Positives = 70/203 (34%), Gaps = 37/203 (18%)
Query: 7 ILVTGGTGLVGKAI-EKIVKE------------EEKRDDETWIFVSSKEADLSNLESTQQ 53
+LVTG G VG AI + E + DL++ ++
Sbjct: 5 LLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIV-----ACDLADAQAVHD 59
Query: 54 LFSKYKPTHVIHLAAM-VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV---SC 109
L +IHL + V ++ D + N+ N+ + + G ++V S
Sbjct: 60 LVKD--CDGIIHLGGVSVERPWN------DILQANIIGAYNLYEAARNLGKPRIVFASS- 110
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
+ I T ID + P P + Y +K + L YY + + ++ +
Sbjct: 111 -NHTIGYYPRTTRIDTEV----PRRPDSL-YGLSKCFGEDLASLYYHKFDIETLNIRIGS 164
Query: 170 VFGPHDNYNLESSHVIPGLIRKL 192
F + + ++ + +L
Sbjct: 165 CFPKPKDARMMATWLSVDDFMRL 187
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 78.2 bits (193), Expect = 9e-17
Identities = 34/212 (16%), Positives = 74/212 (34%), Gaps = 44/212 (20%)
Query: 1 MAEEKIILVTGGTGLVGKAI-EKIVKE------------EEKRDDETWIFVSSKEADLSN 47
MA +++ LVTG G +G+ + E++ + +E + + DL++
Sbjct: 1 MAMKRL-LVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECV-----QCDLAD 54
Query: 48 LESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHN---LDFFRVNMKINDNVLDTSYKQGVK 104
+ + + ++HL + S + N+ N+ + + G
Sbjct: 55 ANAVNAMVAG--CDGIVHLGGI--------SVEKPFEQILQGNIIGLYNLYEAARAHGQP 104
Query: 105 KVVSCLSTC----IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGV 160
++V S+ +P T + + P P Y +K + L + Y+ + G
Sbjct: 105 RIVFA-SSNHTIGYYPQ--TERLGPDV----PARPDGL-YGVSKCFGENLARMYFDKFGQ 156
Query: 161 TYTSVIPCNVFGPHDNYNLESSHVIPGLIRKL 192
V + +NY + S+ L
Sbjct: 157 ETALVRIGSCTPEPNNYRMLSTWFSHDDFVSL 188
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 3e-15
Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 23/200 (11%)
Query: 7 ILVTGGTG-----LVGKAIEKI---------VKEEEKRDDETWIFVSSKEADLSNLESTQ 52
IL+ G G L K + +++ + F + + +
Sbjct: 5 ILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFE---VVNALDFNQIE 61
Query: 53 QLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112
L +K T + +AA++ + + +NM +VL+ + + +KK+ S
Sbjct: 62 HLVEVHKITDIYLMAALLSA--TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSI 119
Query: 113 CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFG 172
+F T PS Y +K+ + + Y+ +GV S+ +
Sbjct: 120 AVFGPTTPKENTP---QYTIMEPSTV-YGISKQAGERWCEYYHNIYGVDVRSIRYPGLIS 175
Query: 173 PHDNYNLESSHVIPGLIRKL 192
++ + K
Sbjct: 176 WSTPPGGGTTDYAVDIFYKA 195
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 73.8 bits (182), Expect = 7e-15
Identities = 67/367 (18%), Positives = 116/367 (31%), Gaps = 95/367 (25%)
Query: 7 ILVTGGTGLVGKAI-EKIVKEEEK---------------RDDETWIFVSSKEADLSNLES 50
+ +TG G +G I E +++ +K +D FV E +++
Sbjct: 24 VFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFV---EGSIADHAL 80
Query: 51 TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV--- 107
QL +P V+H AA + + N NV+ + K V + V
Sbjct: 81 VNQLIGDLQPDAVVHTAASYK----DPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQ 136
Query: 108 SCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIP 167
+ + C P+ P +P+N Y+ +K N+ Y + G+ + +
Sbjct: 137 T--ALCYGVKPIQQPVRLDH----PRNPANSSYAISKSA----NEDYLEYSGLDFVTFRL 186
Query: 168 CNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIP 227
NV GP N G + + + +GK V
Sbjct: 187 ANVVGPR-NV--------SGPLPIFFQRLSEGKKCFV----------------------- 214
Query: 228 FSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVT 287
K R F++ DLAR + + D V +V
Sbjct: 215 -------------------TKARRDFVFVKDLARATVRAV---DGVGHGAYHFSSGTDVA 252
Query: 288 IAEVAEAIANAFQFKGRITFDTNAA-DGQLKKT-ASNRKLRELRGPGFE-FTPFQQAVQE 344
I E+ +A+ A + + + G FTP ++ V
Sbjct: 253 IKELYDAVVEAMALPSYPEPEIRELGPDDAPSILLDPSRTIQDF--GKIEFTPLKETVAA 310
Query: 345 SVAWFRE 351
+VA+FRE
Sbjct: 311 AVAYFRE 317
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 8e-15
Identities = 39/209 (18%), Positives = 70/209 (33%), Gaps = 33/209 (15%)
Query: 7 ILVTGGTGLVG---------------KAIEKIV----KEEEKRDDETWIFVSSKEADLSN 47
I + G G+VG K +EK + E + V ++ ADLS
Sbjct: 17 IAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGA-VDARAADLSA 75
Query: 48 LESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107
++L + +P + HLAA+V G +R+N+ + D K
Sbjct: 76 PGEAEKLV-EARPDVIFHLAAIVSG--EAELDFDKGYRINLDGTRYLFDAIRIANGKDGY 132
Query: 108 SCL----STC-IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTY 162
S+ +F YPI + P Y K + ++L Y ++
Sbjct: 133 KPRVVFTSSIAVFGAPLPYPIPDEF----HTTPLTS-YGTQKAICELLLSDYSRRGFFDG 187
Query: 163 TSVIPCNVFGPHDNYNLESSHVIPGLIRK 191
+ + N +S ++R+
Sbjct: 188 IGIRLPTICIRPGKPNAAASGFFSNILRE 216
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310 | Back alignment and structure |
|---|
Score = 73.0 bits (180), Expect = 9e-15
Identities = 64/374 (17%), Positives = 111/374 (29%), Gaps = 94/374 (25%)
Query: 7 ILVTGGTGLVGKAI---------EKIV---------KEEEKRDDETWIFVSSKEADLSNL 48
I+VTGG G +G I I+ K D ++ + D
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMD--KEDFLIQ 59
Query: 49 ESTQQLFSKYKPTHVIHLAAMVGGLFHN----MSHNLDFFRVNMKINDNVLDTSYKQGVK 104
+ F + H A + M +N + + +L ++ +
Sbjct: 60 IMAGEEFGD--VEAIFHEGACSSTTEWDGKYMMDNNYQYSK-------ELLHYCLEREIP 110
Query: 105 KVVSCLSTC-IFPDKTTYPIDETMVHNGPPHPSNF-GYSHAKRMLDVLNKAYYQQHGVTY 162
+ + S+ + +T+ I+ P N GYS K + D + +
Sbjct: 111 FLYA--SSAATYGGRTSDFIESRE----YEKPLNVYGYS--KFLFDEYVRQILPEANSQI 162
Query: 163 TSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222
NV+GP + + + V L + G+
Sbjct: 163 VGFRYFNVYGPREGHKGSMASVAF----HLNTQLNNGES--------------------- 197
Query: 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE 282
P F G + FK R F+Y D+A + +W L E I ++
Sbjct: 198 ---------PKLFEGSENFK--------RDFVYVGDVADVNLWFL-ENGVSG--IFNLGT 237
Query: 283 KDEVTIAEVAEAIANAFQFKGRITFDTNAAD---GQLKKT-ASNRKLRELRGPGFEFTPF 338
+ VA+A + KG+I + T A LR F
Sbjct: 238 GRAESFQAVADATLAYHK-KGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDK-PFKTV 295
Query: 339 QQAVQESVAWFREN 352
+ V E +AW +
Sbjct: 296 AEGVTEYMAWLNRD 309
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 9e-15
Identities = 64/376 (17%), Positives = 115/376 (30%), Gaps = 90/376 (23%)
Query: 3 EEKIILVTGGTGLVGKAI-EKIVKEEEKR----DD-----------ETWIFVSSKEADLS 46
E ++I+VTGG G +G I + + + D+ + I + D
Sbjct: 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFL 104
Query: 47 NLESTQQLFSKYKPTHVIHLAAMVGGLFHN----MSHNLDFFRVNMKINDNVLDTSYKQG 102
+ F + H A + M +N + + +L ++
Sbjct: 105 IQIMAGEEFG--DVEAIFHEGACSSTTEWDGKYMMDNNYQYSK-------ELLHYCLERE 155
Query: 103 VKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPHPSNF-GYSHAKRMLDVLNKAYYQQHGV 160
+ + + S+ + +T+ I+ P N GYS K + D + +
Sbjct: 156 IPFLYA--SSAATYGGRTSDFIESRE----YEKPLNVFGYS--KFLFDEYVRQILPEANS 207
Query: 161 TYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220
NV+GP + + + V L + G+
Sbjct: 208 QIVGFRYFNVYGPREGHKGSMASVAF----HLNTQLNNGES------------------- 244
Query: 221 DKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSV 280
P F G + FK R F+Y D+A + +W L S I ++
Sbjct: 245 -----------PKLFEGSENFK--------RDFVYVGDVADVNLWFLENGVSG---IFNL 282
Query: 281 DEKDEVTIAEVAEAIANAFQFKGRITFDTNAAD---GQLKKT-ASNRKLRELRGPGFEFT 336
+ VA+A + KG+I + T A LR F
Sbjct: 283 GTGRAESFQAVADATLAYHK-KGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDK-PFK 340
Query: 337 PFQQAVQESVAWFREN 352
+ V E +AW +
Sbjct: 341 TVAEGVTEYMAWLNRD 356
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 1e-14
Identities = 61/386 (15%), Positives = 126/386 (32%), Gaps = 93/386 (24%)
Query: 1 MAEEKIILVTGGTGLVG-------------------------KAIEKIVKEEEKRDDETW 35
+ K L+TG G +G ++++ +
Sbjct: 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRF 81
Query: 36 IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVL 95
F+ E D+ +L + +Q+ HV+H AA+ G + ++ + N+ N+L
Sbjct: 82 CFI---EGDIRDLTTCEQVMKG--VDHVLHQAAL-GSVPRSIVDPITTNATNITGFLNIL 135
Query: 96 DTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYY 155
+ V+ S+ + D P E + +P + Y+ K + ++ + Y
Sbjct: 136 HAAKNAQVQSFTYAASSSTYGDHPALPKVEENI----GNPLSP-YAVTKYVNEIYAQVYA 190
Query: 156 QQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGA 215
+ +G + NVFG + N + VIP +
Sbjct: 191 RTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLK--------------------- 229
Query: 216 NSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEP 275
GD+ + G G+ R F Y ++ ++ I DS +
Sbjct: 230 ----------------------GDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKD 267
Query: 276 IILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAA-------DGQLKKT-ASNRKLRE 327
I +V D T+ E++ I + I + G ++ + A K +
Sbjct: 268 NIYNVAVGDRTTLNELSGYIYDEL---NLIHHIDKLSIKYREFRSGDVRHSQADVTKAID 324
Query: 328 LRGPGFE-FTPFQQAVQESVAWFREN 352
L + ++ ++ S+ W+
Sbjct: 325 LL--KYRPNIKIREGLRLSMPWYVRF 348
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 68.7 bits (169), Expect = 3e-13
Identities = 42/191 (21%), Positives = 67/191 (35%), Gaps = 46/191 (24%)
Query: 7 ILVTGGTGLVG--------KAIEKIV--------KEEEKRDDETWIFVSSKEADLSNLES 50
IL+TGG G +G +I+ K E + E +++
Sbjct: 23 ILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVI---EGSVTDAGL 79
Query: 51 TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV-SC 109
++ F +KPTHV+H AA + + N++ + NV + K GVK+++
Sbjct: 80 LERAFDSFKPTHVVHSAAAY----KDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNF- 134
Query: 110 LSTCIFPDKTTY------PIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYT 163
T Y PI P P Y +K + A+ V
Sbjct: 135 -QTA-----LCYGRPATVPIPIDS----PTAPFTS-YGISKTAGE----AFLMMSDVPVV 179
Query: 164 SVIPCNVFGPH 174
S+ NV GP
Sbjct: 180 SLRLANVTGPR 190
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 6e-13
Identities = 48/359 (13%), Positives = 105/359 (29%), Gaps = 74/359 (20%)
Query: 7 ILVTGGTGLVGKAI-EKIVKEEEKRDDETWI---FVSSKEADLSNLESTQQ--LFSKYK- 59
IL+TGG G +G + +V +E + + + +
Sbjct: 10 ILITGGAGFIGGHLARALVA----SGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEER 65
Query: 60 ----PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIF 115
V HLA+ + + + N+ ++L GV KVV + ++
Sbjct: 66 DLSDVRLVYHLASHK-SVPRSF-KQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVY 123
Query: 116 PDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVI-PCNVFGPH 174
T P E P P + Y+ +K L+++ A+ + ++ NV+GP
Sbjct: 124 GQADTLPTPEDS----PLSPRSP-YAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPG 178
Query: 175 DNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFC 234
+ + ++P L L
Sbjct: 179 ERPDA----LVPRLCANLLT---------------------------------------- 194
Query: 235 FTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEA 294
+E V G G+ R F Y D+ + + + + +++ +V
Sbjct: 195 ---RNELPVEGDGEQRRDFTYITDVVDKLVALA-NRPLPSVVNFGSGQ--SLSVNDVIRI 248
Query: 295 IANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENH 353
+ + + + A G ++ ++ ++ W++
Sbjct: 249 LQATSP-AAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEGIRLTLEWWQSRD 306
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 67.3 bits (164), Expect = 1e-12
Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 37/187 (19%)
Query: 7 ILVTGGTGLVGKA-IEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65
I++TG G VGK + + IF ++ LES K ++H
Sbjct: 3 IVITGAKGFVGKNLKADLTSTTDHH-----IFEVHRQTKEEELESALL-----KADFIVH 52
Query: 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDE 125
LA + + H+ +F N+ D+VLD + K + S+
Sbjct: 53 LAGV-----NRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSS------------- 94
Query: 126 TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVI 185
+ +P Y +K + L + Y +++G T N+FG N S VI
Sbjct: 95 --IQATQDNP----YGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNS--VI 146
Query: 186 PGLIRKL 192
K+
Sbjct: 147 ATFCYKI 153
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 2e-12
Identities = 55/393 (13%), Positives = 108/393 (27%), Gaps = 118/393 (30%)
Query: 3 EEKIILVTGGTGLVG------------------------------KAIEKIVKEEEKRDD 32
E + IL+TGG G VG + +
Sbjct: 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGF 68
Query: 33 ETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN----MSHNLDFFRVNM 88
+ + AD++N ++L K ++ H AA+ N M N F
Sbjct: 69 KGEVI----AADINNPLDLRRLE-KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFL--- 120
Query: 89 KINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTY-----PIDETMVHNGPPHPSNF-GYSH 142
N+L+ + + K + + S+ Y P P N G+S
Sbjct: 121 ----NLLEIARSKKAKVIYA--SSA-----GVYGNTKAPNVVGK----NESPENVYGFS- 164
Query: 143 AKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQ 202
K +D + + NV+GP + Y +++ ++ +L K
Sbjct: 165 -KLCMDEF--VLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVL----QLALGAMAFK-- 215
Query: 203 SVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARL 262
LF G+ LR F+Y D+ +
Sbjct: 216 ------------------------EVKLF-------------EFGEQLRDFVYIEDVIQA 238
Query: 263 FIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKT-AS 321
+ + + + +V + E+ + ++T+ N K T A
Sbjct: 239 NVKAM-KAQKSG--VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPYAFFQKHTQAH 294
Query: 322 NRKLRELRGPGFE-FTPFQQAVQESVAWFRENH 353
+ + +++ +
Sbjct: 295 IEPTILDL--DYTPLYDLESGIKDYLPHIHAIF 325
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404 | Back alignment and structure |
|---|
Score = 65.9 bits (161), Expect = 3e-12
Identities = 55/362 (15%), Positives = 99/362 (27%), Gaps = 73/362 (20%)
Query: 20 IEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM--VGGLFHNM 77
I + + ++ D+ + E + F ++P V+H +
Sbjct: 64 IHDRISRWKALTGKSIELY---VGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDR 120
Query: 78 SHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTY-----PIDETMV---H 129
S + N+ NVL + G + + L T Y I+E + H
Sbjct: 121 SRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGT-----MGEYGTPNIDIEEGYITITH 175
Query: 130 NG-------PPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESS 182
NG P S+F Y +K + G+ T + V+G
Sbjct: 176 NGRTDTLPYPKQASSF-YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVK-------- 226
Query: 183 HVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCF--TGGDE 240
T E + N D + +L FC G
Sbjct: 227 ------------TDETEMHEE----------LRNRLDYD--AVFGTALNRFCVQAAVGHP 262
Query: 241 FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEP--IILSVDEKDEVTIAEVAEAIANA 298
V G G R ++ D + + + E+ ++ E+A + A
Sbjct: 263 LTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQ--FSVNELASLVTKA 320
Query: 299 FQFKGR-----ITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFREN 352
G + + A + KL EL G E + + + +
Sbjct: 321 GSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLMEL---GLEPHYLSDSLLDSLLNFAVQF 377
Query: 353 HS 354
Sbjct: 378 KD 379
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 2e-10
Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 35/188 (18%)
Query: 1 MAEEKIILVTGGTGLVGKAIEK-----------IV----KEEEKRDDETWIFVSSKEADL 45
M + K I++ G +G VG A+ +V K + + + +AD+
Sbjct: 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVK-----KADV 55
Query: 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK 105
S+L+ ++ VI N D + +K+ ++D K GV +
Sbjct: 56 SSLDEVCEVCKGA--DAVISAFNPGWN-------NPDIYDETIKVYLTIIDGVKKAGVNR 106
Query: 106 VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSV 165
+ + + + + P N K + + ++ + +
Sbjct: 107 FLMVGGA-----GSLFIAPGLRLMDSGEVPENI-LPGVKALGEFYLNFLMKEKEIDWVFF 160
Query: 166 IPCNVFGP 173
P P
Sbjct: 161 SPAADMRP 168
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 58.6 bits (141), Expect = 8e-10
Identities = 44/219 (20%), Positives = 77/219 (35%), Gaps = 48/219 (21%)
Query: 5 KIILVTGGTGLVGKAI-------------EKIV-----KEEEKRDDETWIFVSSKEADLS 46
+ L+ G TG++G ++ K+ +D +V D+S
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQ---CDIS 58
Query: 47 NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDT--------- 97
+ + +Q S V H+ + + N S + N K+ NVLD
Sbjct: 59 DPDDSQAKLSPLTD--VTHVFYVT---WANRSTEQENCEANSKMFRNVLDAVIPNCPNLK 113
Query: 98 --SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS-NFGYSHAKRMLDVLNKAY 154
S + G K + + + P E + P NF Y ML +
Sbjct: 114 HISLQTGRKHYMGPFESYGKIESHDPPYTEDL----PRLKYMNFYYDLEDIML----EEV 165
Query: 155 YQQHGVTYTSVIPCNVFG--PHDNYNLESSHVIPGLIRK 191
++ G+T++ P N+FG P+ NL + + I K
Sbjct: 166 EKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICK 204
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 Length = 292 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 7e-09
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
IL+TG G +G+ I+K +K + + I ++ D++N+ + + F++ KP VI+
Sbjct: 15 ILITGANGQLGREIQKQLKGK----NVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVINC 70
Query: 67 AA 68
AA
Sbjct: 71 AA 72
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} Length = 287 | Back alignment and structure |
|---|
Score = 54.8 bits (133), Expect = 1e-08
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+++TG G +GK +++ + E + K D++N+ QQ+ + +P +IH
Sbjct: 8 VIITGANGQLGKQLQEELNPE----EYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHC 63
Query: 67 AA 68
AA
Sbjct: 64 AA 65
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 7 ILVTGGTGLVGKAIEKIVKE---EEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHV 63
+LVTG TGL+G+A+ K ++ ++ +L + + + ++P +
Sbjct: 5 VLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVI 64
Query: 64 IHLAAM 69
+H AA
Sbjct: 65 VHCAAE 70
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} Length = 273 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 2e-08
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 7 ILVTGGTGLVGKAIEKIVKE--EEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
L+TG +G +G + +++ E E + + + DL++ + K +P +I
Sbjct: 3 TLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVII 62
Query: 65 HLAAM 69
+ AAM
Sbjct: 63 NAAAM 67
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 64/325 (19%), Positives = 116/325 (35%), Gaps = 73/325 (22%)
Query: 5 KIILVTGGTGLVGK-AIEKIVKEEEK---RDDETWIFVSSKEADLSNLES---------- 50
K IL+TGG G VG +K++ + + D+ F + ++ ++ +
Sbjct: 28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN----FFTGRKRNVEHWIGHENFELINHD 83
Query: 51 -TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ L+ + + HLA+ + M + + + N N+L + + G + +++
Sbjct: 84 VVEPLYIEVD--QIYHLASPAS-PPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLA- 139
Query: 110 LST-CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPC 168
ST ++ D +P E + P Y KR+ + + AY +Q GV
Sbjct: 140 -STSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIF 198
Query: 169 NVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPF 228
N FGP ++ V+ I + +G+ +V+
Sbjct: 199 NTFGP--RMHMNDGRVVSNFILQAL----QGEPLTVY----------------------- 229
Query: 229 SLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTI 288
G+G R F Y DL + L + P+ L +E TI
Sbjct: 230 ----------------GSGSQTRAFQYVSDLVNGLV-ALMNSNVSSPVNLGNP--EEHTI 270
Query: 289 AEVAEAIANAFQFKGRITFDTNAAD 313
E A+ I N I F + A D
Sbjct: 271 LEFAQLIKNLVGSGSEIQFLSEAQD 295
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330 | Back alignment and structure |
|---|
Score = 52.8 bits (128), Expect = 5e-08
Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 47/186 (25%)
Query: 5 KIILVTGGTGLVG--------KAIEKIV--------KEEEKRDDETWIFVSSKEADLSNL 48
IL+ GG G +G +V E+ + + DL +
Sbjct: 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFY-----NGDLRDK 56
Query: 49 ESTQQLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV 106
+ +F++ V+H AA VG +M L ++ N+ +L+ + V K
Sbjct: 57 AFLRDVFTQENIEAVMHFAADSLVG---VSMEKPLQYYNNNVYGALCLLEVMDEFKVDKF 113
Query: 107 V-SCLSTCIFPDKTTY------PIDETMVHNGPPHPSN-FGYSHAKRMLDVLNKAYYQQH 158
+ S ST TY I E +P+N +G + K ++ + Y Q
Sbjct: 114 IFS--STA-----ATYGEVDVDLITEET----MTNPTNTYGET--KLAIEKMLHWYSQAS 160
Query: 159 GVTYTS 164
+ Y
Sbjct: 161 NLRYKI 166
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341 | Back alignment and structure |
|---|
Score = 52.1 bits (126), Expect = 1e-07
Identities = 44/185 (23%), Positives = 70/185 (37%), Gaps = 66/185 (35%)
Query: 1 MAEEKIILVTGGTGLVG----------------------------KAIEKIVKEEEKRDD 32
M+ + ILVTGG G +G IEKI +
Sbjct: 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPA--- 58
Query: 33 ETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKI 90
F E D+S+ + ++F + T IH AA+ VG +++ ++++R N+
Sbjct: 59 ----FH---ETDVSDERALARIFDAHPITAAIHFAALKAVG---ESVAKPIEYYRNNLDS 108
Query: 91 NDNVLDTSYKQGVKKVV---SCLSTCIFPDKTTY------PIDETMVHNGPPHPSNFGYS 141
++L ++ VK++V S T Y PIDET P +N Y
Sbjct: 109 LLSLLRVMRERAVKRIVFSSSA---------TVYGVPERSPIDETF----PLSATN-PYG 154
Query: 142 HAKRM 146
K M
Sbjct: 155 QTKLM 159
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* Length = 344 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 4e-07
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 31/143 (21%)
Query: 1 MAEEKIILVTGGTGLVGKA----------IEKIV---KEEEKRDDETWIFVSSKE----A 43
M + + IL+TGGTG GK +KI+ ++E K+ + F +
Sbjct: 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIG 77
Query: 44 DLSNLESTQQLFSKYKPTHVIHLAAM--VGGL-FHNMSHNLDFFRVNMKINDNVLDTSYK 100
D+ +LE IH AA+ V ++ + + + N+ NV++ K
Sbjct: 78 DVRDLERLNYALEG--VDICIHAAALKHVPIAEYNPL----ECIKTNIMGASNVINACLK 131
Query: 101 QGVKKVVSCLSTCIFPDKTTYPI 123
+ +V+ LST DK PI
Sbjct: 132 NAISQVI-ALST----DKAANPI 149
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 4e-07
Identities = 65/385 (16%), Positives = 130/385 (33%), Gaps = 89/385 (23%)
Query: 7 ILVTGGTGLVGKA-IEKIVKE---------------EEKRDDETWIFVSSKEADLSNLES 50
+L+ G G +G E++++E + + FV E D+S
Sbjct: 3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFV---EGDISIHSE 59
Query: 51 TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110
+ K K V+ L A+ + L F ++ + N ++ K + +
Sbjct: 60 WIEYHVK-KCDVVLPLVAIAT-PIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFP-- 115
Query: 111 STC-IFPDKTTYPIDETM--VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIP 167
ST ++ + DE + GP + + YS +K++LD + AY ++ G+ +T P
Sbjct: 116 STSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRP 175
Query: 168 CNVFGP----HDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223
N GP + + SS I LI L +G +
Sbjct: 176 FNWMGPRLDNLNAARIGSSRAITQLILNLV----EGSPIKLI------------------ 213
Query: 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLR-EYDSVEPIILSV-D 281
GK R F D ++ + + I+++ +
Sbjct: 214 ---------------------DGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN 252
Query: 282 EKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRE----LRGP------ 331
++E +I E+ E + +F+ A ++ +++S R P
Sbjct: 253 PENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAH 312
Query: 332 ---GFE-FTPFQQAVQESVAWFREN 352
+E Q+ + E++ +F
Sbjct: 313 RCLDWEPKIDMQETIDETLDFFLRT 337
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* Length = 338 | Back alignment and structure |
|---|
Score = 49.0 bits (118), Expect = 1e-06
Identities = 34/179 (18%), Positives = 56/179 (31%), Gaps = 65/179 (36%)
Query: 7 ILVTGGTGLVG----------------------------KAIEKIVKEEEKRDDETWIFV 38
+LVTGG+G +G IE++ + FV
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPT-------FV 55
Query: 39 SSKEADLSNLESTQQLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKINDNVLD 96
E D+ N ++ + VIH A + VG ++ L+++ N+ ++
Sbjct: 56 ---EGDIRNEALMTEILHDHAIDTVIHFAGLKAVG---ESVQKPLEYYDNNVNGTLRLIS 109
Query: 97 TSYKQGVKKVV---SCLSTCIFPDKTTY------PIDETMVHNGPPHPSNFGYSHAKRM 146
VK + S T Y P E+ P P Y +K M
Sbjct: 110 AMRAANVKNFIFSSSA---------TVYGDNPKIPYVESFPTGTPQSP----YGKSKLM 155
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 1e-06
Identities = 39/214 (18%), Positives = 80/214 (37%), Gaps = 33/214 (15%)
Query: 3 EEKIILVTGGTGLVGKA-IEKIVKE---------------EEKRDDETWIFVSSKEADLS 46
+ K +L+ G G +G ++I++ + E F E D++
Sbjct: 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFF---EGDIT 79
Query: 47 NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV 106
+ + K K ++ L A+ + L F ++ + N ++ ++ K G V
Sbjct: 80 INKEWVEYHVK-KCDVILPLVAIAT-PATYVKQPLRVFELDFEANLPIVRSAVKYGKHLV 137
Query: 107 VSCLSTC----IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTY 162
ST + D+ P + + GP + + Y+ +K+++D + Y G+ +
Sbjct: 138 FP--STSEVYGMCADEQFDPDASALTY-GPINKPRWIYACSKQLMDRVIWGYG-MEGLNF 193
Query: 163 TSVIPCNVFGP----HDNYNLESSHVIPGLIRKL 192
T P N GP SS V+ + +
Sbjct: 194 TLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHI 227
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 2e-06
Identities = 67/407 (16%), Positives = 113/407 (27%), Gaps = 139/407 (34%)
Query: 4 EKIILVTGGTGLVGK---AIE--KIVKEEEKRDDET-WIFVSSKEADLSNLESTQQLFSK 57
K +L+ G G GK A++ K + K D + W+ + + + + LE Q+L +
Sbjct: 150 AKNVLIDGVLG-SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208
Query: 58 YKPTHVIHLAAMVG-------------GLFHNMSHN--------------LDFFRVNMKI 90
P L + + + F ++ KI
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKI 268
Query: 91 -----NDNVLDTSYKQGVKKVV------------------SCLSTCIFPD-----KTTYP 122
V D + L C D TT P
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-CRPQDLPREVLTTNP 327
Query: 123 -----IDETMVHNGPPHPSNFGYSHAKRM-------LDVLN----KAYYQQHGVTYTSV- 165
I E + +G N+ + + ++ L+VL + + + V S
Sbjct: 328 RRLSIIAE-SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 166 IPCNVFG-------PHD---------NYNL------ESSHVIPGLIRKLYDTIEKGKD-- 201
IP + D Y+L ES+ IP + +L +E
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446
Query: 202 QSVFES---RARFPPGANSFGLDKLD----------LIP------FSLFPFCFTGGD-EF 241
+S+ + F + LD L +LF F D F
Sbjct: 447 RSIVDHYNIPKTFDS--DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFL--DFRF 502
Query: 242 ---KVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDE 285
K+ L+ + L+ Y +P I D K E
Sbjct: 503 LEQKIRHDSTAWNASGSILNT----LQQLKFY---KPYICDNDPKYE 542
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.1 bits (98), Expect = 3e-04
Identities = 39/342 (11%), Positives = 86/342 (25%), Gaps = 82/342 (23%)
Query: 75 HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDK--TTYPIDETMVHNGP 132
H+ H++DF + + + ++ C P + ID +
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHII---MS 57
Query: 133 PHPSNFGY-----------SHAKRML-DVLNKAY----------YQQHGVTYTSVIPC-- 168
+ ++ + +VL Y +Q + I
Sbjct: 58 KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117
Query: 169 ---NVFGPHDNYNLESSHVIPGLIRKLY-DTIEK----------GKDQSV--------FE 206
N YN+ L + L K GK + ++
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGK--TWVALDVCLSYK 175
Query: 207 SRARFPPGAN--SFG-LDKLDLIPFSLFPFCFTGGDEFKVLGTG-KPLRQFIYSLDLARL 262
+ + + + + + L + + ++ I+S+
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235
Query: 263 FIWVLREY-DSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI---TFDTNAADGQLKK 318
+ + Y + + ++L V A+ AF +I T D
Sbjct: 236 RLLKSKPYENCL--LVL-----LNVQNAKAWN----AFNLSCKILLTTRFKQVTDFLSAA 284
Query: 319 TASNRKLRELRGPGFEFTPFQQAVQESVAWFRE--NHSVARL 358
T ++ L TP E + + + L
Sbjct: 285 TTTHISLDHHSMT---LTP-----DEVKSLLLKYLDCRPQDL 318
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 3e-06
Identities = 42/182 (23%), Positives = 63/182 (34%), Gaps = 56/182 (30%)
Query: 1 MAEEKIILVTGGTGLVG----------------------------KAIEKIVKEEEKRDD 32
+ KI+LVTGG G +G +E + K
Sbjct: 8 ESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIP--- 64
Query: 33 ETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNMKI 90
F E DL + + +++F +YK VIH A + VG + L ++ N+
Sbjct: 65 ----FY---EVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVG---ESTQIPLRYYHNNILG 114
Query: 91 NDNVLDTSYKQGVKKVV---SCL---STCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAK 144
+L+ + V K V S FP+ PI E P P+N Y H K
Sbjct: 115 TVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMI--PIPEEC----PLGPTN-PYGHTK 167
Query: 145 RM 146
Sbjct: 168 YA 169
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* Length = 299 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 3e-06
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKE--ADLSNLESTQQLFSKYKPTHVI 64
IL+ G TG VG +++ + + + V SKE D SN + + K +P ++
Sbjct: 3 ILLFGKTGQVGWELQRSLAP---VGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIV 59
Query: 65 HLAA 68
+ AA
Sbjct: 60 NAAA 63
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* Length = 348 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 71/187 (37%)
Query: 5 KIILVTGGTGLVG----------------------------------KAIEKIVKEEEKR 30
+ +LVTGG G +G + ++++ +
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVE- 61
Query: 31 DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM--VGGLFHNMSHNLDFFRVNM 88
F E D+ + + Q+LF KY VIH A + VG ++ LD++RVN+
Sbjct: 62 ------FE---EMDILDQGALQRLFKKYSFMAVIHFAGLKAVG---ESVQKPLDYYRVNL 109
Query: 89 KINDNVLDTSYKQGVKKVV---SCLSTCIFPDKTTY------PIDETMVHNGPPHPSNFG 139
+L+ GVK +V S T Y P+DE G +P
Sbjct: 110 TGTIQLLEIMKAHGVKNLVFSSSA---------TVYGNPQYLPLDEAHPTGGCTNP---- 156
Query: 140 YSHAKRM 146
Y +K
Sbjct: 157 YGKSKFF 163
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 3e-05
Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 21/121 (17%)
Query: 5 KIILVTGGTGLVGKAI----------EKI---VKEEEKRDDETWIFVSSKEADLSNLEST 51
K + + G +G G+ + K+ + + D+E + V+ + D L+
Sbjct: 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDY 78
Query: 52 QQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK--VVSC 109
F + G + F RV+ + + G K ++S
Sbjct: 79 ASAFQGHD--VGFCC----LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132
Query: 110 L 110
Sbjct: 133 K 133
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357 | Back alignment and structure |
|---|
Score = 44.1 bits (104), Expect = 4e-05
Identities = 37/216 (17%), Positives = 68/216 (31%), Gaps = 42/216 (19%)
Query: 5 KIILVTGGTGLVGK----------------AIEKIVKEEEKRDDETWIFVSSKEADLSNL 48
K + VTG TG G ++ + S+ D+ +
Sbjct: 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ 69
Query: 49 ESTQQLFSKYKPTHVIHLAA--MVGGLFHNMSHNLDFFRVNMKINDNVLDT-SYKQGVKK 105
+ +++P V H+AA +V + + NV+ T + ++
Sbjct: 70 NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVET---------YSTNVMGTVYLLEAIRH 120
Query: 106 VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG--YSHAKRMLDVL---------NKAY 154
V + Y E + YS++K +++ N A
Sbjct: 121 VGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPAN 180
Query: 155 YQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIR 190
Y QHG +V NV G D ++P ++R
Sbjct: 181 YGQHGTAVATVRAGNVIGGGD---WALDRIVPDILR 213
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* Length = 397 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 8e-05
Identities = 30/214 (14%), Positives = 64/214 (29%), Gaps = 75/214 (35%)
Query: 7 ILVTGGTGLVG--------------------------------------KAIEKIVKEEE 28
+LV GG G +G + +++ +
Sbjct: 5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64
Query: 29 KRDDETWIFVSSKEADLSNLESTQQLFSKYKPTH-VIHLAAM--VGGLFHNMSHNLDFFR 85
D D+ N + +F+++ P V+H+ A VG ++ L ++
Sbjct: 65 PWADRYAALE---VGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVG---ESVRDPLKYYD 118
Query: 86 VNMKINDNVLDTSYKQGVKKVV-SCLSTCIFPDKTTY-------------PIDETMVHNG 131
N+ +L K++ S S+ + PID
Sbjct: 119 NNVVGILRLLQAMLLHKCDKIIFS--SSA-----AIFGNPTMGSVSTNAEPIDINA---- 167
Query: 132 PPHPSN-FGYSHAKRMLDVLNKAYYQQHGVTYTS 164
P + +G S K + + + + + +G+
Sbjct: 168 KKSPESPYGES--KLIAERMIRDCAEAYGIKGIC 199
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 Length = 347 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 17/84 (20%), Positives = 26/84 (30%), Gaps = 23/84 (27%)
Query: 5 KIILVTGGTGLVGKA-IEKIVKEEEK-------------------RDDETWIFVSSKEAD 44
+L+TGG G +G + + + FV D
Sbjct: 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFV---HGD 58
Query: 45 LSNLESTQQLFSKYKPTHVIHLAA 68
+ N +L +KY P HLA
Sbjct: 59 IRNKNDVTRLITKYMPDSCFHLAG 82
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* Length = 361 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 1e-04
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 24/83 (28%)
Query: 7 ILVTGGTGLVGKA-IEKIVKEEEKR--------------------DDETWIFVSSKEADL 45
IL+TGG G +G A + I+K + + + F AD+
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFE---HADI 59
Query: 46 SNLESTQQLFSKYKPTHVIHLAA 68
+ ++F +Y+P V+HLAA
Sbjct: 60 CDSAEITRIFEQYQPDAVMHLAA 82
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 41.1 bits (96), Expect = 2e-04
Identities = 23/184 (12%), Positives = 49/184 (26%), Gaps = 38/184 (20%)
Query: 7 ILVTGGTGLVGKAIEK-----------IV----KEEEKRDDETWIFVSSKEADLSNLEST 51
I + G TG G I + IV K + D + + D+ +L
Sbjct: 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINIL-----QKDIFDL--- 54
Query: 52 QQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111
+ + + + D ++ D+++ +++
Sbjct: 55 -----------TLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103
Query: 112 TCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVF 171
D + Y A+ L Q ++T + P +F
Sbjct: 104 AASLQIDE----DGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMF 159
Query: 172 GPHD 175
P +
Sbjct: 160 EPGE 163
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC-IFPDKTTY 121
V+ L A+ + + + L F ++ + N ++ K + + ST ++ +
Sbjct: 386 VLPLVAIATPIEYT-RNPLRVFELDFEENLRIIRYCVKYRKRIIFP--STSEVYGMCSDK 442
Query: 122 PIDETMVH--NGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH-DNYN 178
DE + GP + + YS +K++LD + AY ++ G+ +T P N GP DN N
Sbjct: 443 YFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLN 502
Query: 179 ---LESSHVIPGLIRKL 192
+ SS I LI L
Sbjct: 503 AARIGSSRAITQLILNL 519
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 40.0 bits (93), Expect = 5e-04
Identities = 24/178 (13%), Positives = 47/178 (26%), Gaps = 27/178 (15%)
Query: 7 ILVTGGTGLVGKAIEK-----------IVKEEEKRDDETWIFVSSKEADLSNLESTQQLF 55
I V G TG G AI +V++ +K D V L T+
Sbjct: 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATV--ATLVKEPLVLTEADL 60
Query: 56 SKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIF 115
V+ ++ G +++ +++ V S +
Sbjct: 61 D--SVDAVVDALSVPWG--------SGRGYLHLDFATHLVSLLRNSDTLAVFILGSASLA 110
Query: 116 PDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGP 173
D M+ + P ++ + + V + + P F
Sbjct: 111 MP----GADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPS 164
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 358 | |||
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.98 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.98 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.98 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.98 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.97 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.97 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.97 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.96 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.96 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.95 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.94 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.94 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.94 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.94 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.94 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.93 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.93 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.93 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.93 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.92 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.92 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.92 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.9 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.89 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.89 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.88 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.87 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.87 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.85 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.85 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.84 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.84 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.84 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.83 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.83 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.83 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.83 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.83 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.82 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.82 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.82 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.82 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.82 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.81 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.81 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.81 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.81 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.81 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.81 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.81 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.8 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.8 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.8 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.8 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.8 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.8 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.8 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.79 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.79 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.79 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.79 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.79 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.79 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.79 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.79 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.79 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.79 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.79 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.79 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.79 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.79 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.78 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.78 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.78 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.78 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.78 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.78 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.78 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.78 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.78 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.78 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.78 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.78 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.78 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.78 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.77 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.77 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.77 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.77 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.77 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.77 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.77 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.77 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.77 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.77 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.77 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.77 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.77 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.76 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.76 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.76 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.76 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.76 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.76 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.76 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.76 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.76 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.76 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.76 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.76 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.76 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.76 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.75 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.75 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.75 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.75 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.75 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.75 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.75 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.75 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.75 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.75 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.75 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.75 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.74 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.74 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.74 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.74 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.74 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.74 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.74 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.74 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.74 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.74 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.74 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.74 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.74 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.74 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.74 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.74 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.73 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.73 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.73 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.73 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.73 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.73 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.73 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.73 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.73 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.73 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.73 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.73 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.72 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.72 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.72 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.72 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.72 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.72 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.72 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.72 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.72 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.72 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.71 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.71 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.71 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.71 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.71 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.71 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.71 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.71 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.71 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.71 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.71 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.7 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.7 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.7 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.7 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.7 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.7 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.7 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.7 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.69 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.69 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.69 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.69 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.69 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.69 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.68 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.68 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.68 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.68 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.68 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.68 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.68 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.68 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.67 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.67 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.67 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.67 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.67 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.67 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.67 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.66 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.66 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.65 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.65 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.65 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.64 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.64 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.63 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.63 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.62 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.61 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.6 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.6 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.59 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.59 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.58 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.58 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.58 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.56 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.55 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.54 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.52 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.51 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.48 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.48 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.47 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.45 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.43 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.41 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.41 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.4 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.37 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.36 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.35 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.33 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.3 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.3 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.26 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.92 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.9 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.89 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.86 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.85 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.81 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.68 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.67 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.64 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.63 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.62 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.61 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 98.59 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.58 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.35 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.13 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.98 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.96 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.92 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.89 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.87 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 97.86 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.84 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.73 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.61 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.59 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.47 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.45 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.31 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 97.26 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.16 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.13 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.12 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.1 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.06 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.04 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 96.94 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 96.83 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 96.76 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 96.63 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.59 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.46 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 96.45 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 96.33 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.28 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.25 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.22 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 96.22 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.18 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.16 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.16 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 96.08 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.05 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.04 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.0 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 95.93 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 95.9 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 95.9 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 95.69 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 95.61 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 95.6 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 95.6 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 95.56 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 95.53 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 95.49 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 95.43 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 95.35 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 95.34 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 95.3 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 95.13 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 95.06 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 95.03 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 95.03 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 95.02 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 94.89 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 94.8 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 94.7 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 94.58 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 94.55 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 94.55 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 94.44 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 94.42 | |
| 4dim_A | 403 | Phosphoribosylglycinamide synthetase; structural g | 94.41 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 94.31 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 94.14 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 93.81 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 93.75 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 93.74 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 93.71 | |
| 3e5r_O | 337 | PP38, glyceraldehyde-3-phosphate dehydrogenase, cy | 93.67 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 93.65 | |
| 1u8f_O | 335 | GAPDH, glyceraldehyde-3-phosphate dehydrogenase, l | 93.53 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 93.24 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 93.23 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 93.18 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 93.01 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 92.99 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 92.87 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 92.54 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 92.48 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 92.41 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 92.4 | |
| 3keo_A | 212 | Redox-sensing transcriptional repressor REX; DNA b | 92.33 | |
| 2x5j_O | 339 | E4PDH, D-erythrose-4-phosphate dehydrogenase; oxid | 92.26 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 92.25 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 92.24 | |
| 2yv2_A | 297 | Succinyl-COA synthetase alpha chain; COA-binding d | 92.05 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 92.05 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 91.93 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 91.85 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 91.85 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 91.83 | |
| 3b1j_A | 339 | Glyceraldehyde 3-phosphate dehydrogenase (NADP+); | 91.79 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 91.78 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 91.61 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 91.6 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 91.58 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 91.57 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 91.51 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 91.48 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 91.26 | |
| 1r0k_A | 388 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; N | 91.21 | |
| 1vm6_A | 228 | DHPR, dihydrodipicolinate reductase; TM1520, struc | 91.15 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 91.11 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 91.03 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 90.93 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 90.87 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 90.85 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 90.83 | |
| 3nkl_A | 141 | UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fo | 90.83 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 90.78 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 90.72 | |
| 2d2i_A | 380 | Glyceraldehyde 3-phosphate dehydrogenase; rossmann | 90.59 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 90.45 | |
| 1cf2_P | 337 | Protein (glyceraldehyde-3-phosphate dehydrogenase) | 90.42 | |
| 3ff4_A | 122 | Uncharacterized protein; structural genomics, PSI- | 90.3 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 90.17 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 90.14 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 90.14 | |
| 3ouz_A | 446 | Biotin carboxylase; structural genomics, center fo | 90.1 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 90.09 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 90.04 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 89.96 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 89.88 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 89.84 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 89.76 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 89.29 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 89.1 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 89.07 | |
| 2fp4_A | 305 | Succinyl-COA ligase [GDP-forming] alpha-chain, mit | 89.04 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 88.95 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 88.6 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 88.6 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 88.12 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 88.03 | |
| 3c8m_A | 331 | Homoserine dehydrogenase; structural genomics, APC | 88.03 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 87.99 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 87.95 | |
| 3evn_A | 329 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 87.9 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 87.89 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 87.87 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 87.85 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 87.58 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 87.52 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 87.42 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 87.4 | |
| 2w70_A | 449 | Biotin carboxylase; ligase, ATP-binding, fatty aci | 87.35 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 87.2 | |
| 1u8x_X | 472 | Maltose-6'-phosphate glucosidase; structural genom | 87.15 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 87.1 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 86.73 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 86.49 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 86.44 | |
| 1tt5_A | 531 | APPBP1, amyloid protein-binding protein 1; cell cy | 86.25 | |
| 2czc_A | 334 | Glyceraldehyde-3-phosphate dehydrogenase; glycolys | 86.21 | |
| 1b7g_O | 340 | Protein (glyceraldehyde 3-phosphate dehydrogenase; | 86.19 | |
| 3au8_A | 488 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; N | 86.04 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 85.93 | |
| 3m2t_A | 359 | Probable dehydrogenase; PSI, SGXNY, structural gen | 85.92 | |
| 3bio_A | 304 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 85.65 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 85.57 | |
| 4ew6_A | 330 | D-galactose-1-dehydrogenase protein; nysgrc, PSI-b | 85.53 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 85.48 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 85.31 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 85.07 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 85.04 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 84.89 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 84.82 | |
| 1ydw_A | 362 | AX110P-like protein; structural genomics, protein | 84.76 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 84.65 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 84.6 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 84.52 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 84.51 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 84.41 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 84.4 | |
| 3ro0_A | 223 | Pyrrolidone-carboxylate peptidase; hydrolase-hydro | 84.11 |
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-50 Score=377.87 Aligned_cols=315 Identities=63% Similarity=1.026 Sum_probs=277.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchh
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNL 81 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~ 81 (358)
|+||+|||||||||||++|+++|+++|++.......++.+.+|++|++++.+++++.++|+|||+|+..+.......++.
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~ 83 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVGGLFRNIKYNL 83 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCCCHHHHTTCHH
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhhcCCCEEEECceecccccccccCHH
Confidence 45689999999999999999999999986556667778889999999999999997779999999998653334557788
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCce
Q psy7590 82 DFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVT 161 (358)
Q Consensus 82 ~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~ 161 (358)
..+++|+.++.+|+++|++.++++|||+||.++|+.....+++|+++...++.|.+.+|+.+|+.+|++++.+++..+++
T Consensus 84 ~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~ 163 (319)
T 4b8w_A 84 DFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCT 163 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhCCC
Confidence 89999999999999999999999999999999999887889999986655666766469999999999999999989999
Q ss_pred EEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceE
Q psy7590 162 YTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEF 241 (358)
Q Consensus 162 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (358)
++++||+++|||...+....+.+++.++..++..... |.++
T Consensus 164 ~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~ 204 (319)
T 4b8w_A 164 FTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSS---------------------------------------GSAL 204 (319)
T ss_dssp EEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHH---------------------------------------TCCE
T ss_pred EEEEeeccccCCCCCCCCccccccHHHHHHHHHHhcc---------------------------------------CCce
Confidence 9999999999999876666667888888887766676 8899
Q ss_pred EEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCCCCccccccc
Q psy7590 242 KVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTAS 321 (358)
Q Consensus 242 ~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~ 321 (358)
.+++++.+.++|+|++|+|++++.+++++....+++||+++++.+|+.|+++.+.+.+|.+.++...+.+........+|
T Consensus 205 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d 284 (319)
T 4b8w_A 205 TVWGTGNPRRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTAS 284 (319)
T ss_dssp EEESCSCCEECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTSCCCCSCCCBC
T ss_pred EEeCCCCeeEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCCCcCcccccCC
Confidence 99999999999999999999999999986655567999999999999999999999999998888877666556667899
Q ss_pred hHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcccc
Q psy7590 322 NRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSVAR 357 (358)
Q Consensus 322 ~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~~~ 357 (358)
++|++++| ||.|. +++++|+++++|++++.+.+|
T Consensus 285 ~~k~~~~l--g~~p~~~~~~~l~~~~~~~~~~~~~~r 319 (319)
T 4b8w_A 285 NSKLRTYL--PDFRFTPFKQAVKETCAWFTDNYEQAR 319 (319)
T ss_dssp CHHHHHHC--TTCCCCCHHHHHHHHHHHHHHSCSSCC
T ss_pred HHHHHHhc--CCCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 99999999 99964 999999999999999887664
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-46 Score=354.58 Aligned_cols=300 Identities=20% Similarity=0.251 Sum_probs=249.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-Cc---------------eeeecccccCCCHHHHHHHHhccC
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-TW---------------IFVSSKEADLSNLESTQQLFSKYK 59 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-~~---------------~~~~~~~~Dl~~~~~~~~~~~~~~ 59 (358)
|++|+|||||||||||++|++.|+++|++ ... .. ..++++.+|++|++++.++++ +
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~ 100 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--G 100 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--T
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--C
Confidence 34679999999999999999999999984 111 00 356677999999999999999 6
Q ss_pred CcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
+|+|||+|+.... .....++...+++|+.++.+|+++|++.++++|||+||.++|+.....+++|++ +..|.+ .
T Consensus 101 ~d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~----~~~p~~-~ 174 (351)
T 3ruf_A 101 VDHVLHQAALGSV-PRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEEN----IGNPLS-P 174 (351)
T ss_dssp CSEEEECCCCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTC----CCCCCS-H
T ss_pred CCEEEECCccCCc-chhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCC----CCCCCC-h
Confidence 9999999997532 234467778999999999999999999999999999999999988788999998 777777 7
Q ss_pred hHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
|+.+|..+|.+++.+++.+|++++++||++||||...+......+++.++..+. .
T Consensus 175 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~----~--------------------- 229 (351)
T 3ruf_A 175 YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAML----K--------------------- 229 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHH----H---------------------
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHH----c---------------------
Confidence 999999999999999988899999999999999987665444455555555444 3
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
+.++.+++++.+.++|+|++|+|++++.++.+.....+++||+++++.+|+.|+++.+.+.+
T Consensus 230 ------------------~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~ 291 (351)
T 3ruf_A 230 ------------------GDDVYINGDGETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDEL 291 (351)
T ss_dssp ------------------TCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred ------------------CCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHh
Confidence 77888889999999999999999999999987333345699999999999999999999999
Q ss_pred CCC-----cceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 300 QFK-----GRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 300 g~~-----~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
|.+ .+....+..........+|++|+++.| ||+|+ +++++|+++++||+++.+
T Consensus 292 g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~~~l~~~~~~~~~~~~ 350 (351)
T 3ruf_A 292 NLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLL--KYRPNIKIREGLRLSMPWYVRFLK 350 (351)
T ss_dssp HTTCCC-----EEECCCTTCCSBCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHC
T ss_pred CcccccccccccccCCCCCccceeeeCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHhhc
Confidence 983 333333444444556789999999999 99987 999999999999998754
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=350.12 Aligned_cols=298 Identities=19% Similarity=0.275 Sum_probs=244.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccc--c------C--CCC---------ceeeecccccCCCHHHHHHHHhccCCcE
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEK--R------D--DET---------WIFVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~--~------~--~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
++||+|||||||||||++|+++|+++|+ + . ... ...+.++.+|++|++++.+++++.++|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 3467999999999999999999999983 1 1 110 1356677999999999999999767999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCC-CCCCCccccccCCCCCCCCcchH
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDK-TTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~-~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
|||+|+.... .....++...+++|+.++.+|+++|++.++++|||+||.++|+.. ...+++|++ +..|.+ .|+
T Consensus 102 Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~----~~~p~~-~Y~ 175 (346)
T 4egb_A 102 IVNFAAESHV-DRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEET----PLAPNS-PYS 175 (346)
T ss_dssp EEECCCCC----------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTS----CCCCCS-HHH
T ss_pred EEECCcccch-hhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCC----CCCCCC-hhH
Confidence 9999997642 234467788999999999999999999999999999999999976 357899998 777777 799
Q ss_pred HHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCC
Q psy7590 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLD 221 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (358)
.+|..+|.+++.+++.+|++++++||+++|||..... .+++.++ .....
T Consensus 176 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~----~~~~~~~----~~~~~----------------------- 224 (346)
T 4egb_A 176 SSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE----KLIPLMV----TNALE----------------------- 224 (346)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT----SHHHHHH----HHHHT-----------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc----chHHHHH----HHHHc-----------------------
Confidence 9999999999999998899999999999999987532 3344444 44444
Q ss_pred ccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCC
Q psy7590 222 KLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQF 301 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~ 301 (358)
+.++.+++++.+.++|+|++|+|++++.+++++.. +++||+++++.+++.|+++.+.+.+|.
T Consensus 225 ----------------~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~i~~~~~~s~~e~~~~i~~~~g~ 286 (346)
T 4egb_A 225 ----------------GKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV--GEVYNIGGNNEKTNVEVVEQIITLLGK 286 (346)
T ss_dssp ----------------TCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCT--TCEEEECCSCCEEHHHHHHHHHHHHTC
T ss_pred ----------------CCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCC--CCEEEECCCCceeHHHHHHHHHHHhCC
Confidence 77888889999999999999999999999998663 348999999999999999999999998
Q ss_pred Ccc-eeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhccc
Q psy7590 302 KGR-ITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSVA 356 (358)
Q Consensus 302 ~~~-i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~~ 356 (358)
+.+ +...+.+........+|++|+++.| ||+|+ +++++|+++++||+++.+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~e~l~~~~~~~~~~~~~~ 341 (346)
T 4egb_A 287 TKKDIEYVTDRLGHDRRYAINAEKMKNEF--DWEPKYTFEQGLQETVQWYEKNEEWW 341 (346)
T ss_dssp CGGGCEEECC--CCCSCCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHCHHHH
T ss_pred CcccccccCCCCCCcceeeccHHHHHHHc--CCCCCCCHHHHHHHHHHHHHhhhhhh
Confidence 766 4555554545556779999999999 99987 99999999999999987643
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-45 Score=342.88 Aligned_cols=311 Identities=30% Similarity=0.512 Sum_probs=249.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccch
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHN 80 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~ 80 (358)
|+ +|+|||||||||||++|+++|+++|++ .....+...+|++|++++.++++..++|+|||+|+..........++
T Consensus 1 M~-~~~ilVtGatG~iG~~l~~~L~~~g~~---v~~~~r~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~ 76 (321)
T 1e6u_A 1 MA-KQRVFIAGHRGMVGSAIRRQLEQRGDV---ELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYP 76 (321)
T ss_dssp -C-CEEEEEETTTSHHHHHHHHHHTTCTTE---EEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCH
T ss_pred CC-CCEEEEECCCcHHHHHHHHHHHhCCCe---EEEEecCccCCccCHHHHHHHHHhcCCCEEEEcCeecCCcchhhhCH
Confidence 44 469999999999999999999998863 11111223689999999999998666999999999764211234567
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCc
Q psy7590 81 LDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGV 160 (358)
Q Consensus 81 ~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~ 160 (358)
...+++|+.++.+|+++|++.++++|||+||.++|+.....+++|+++...+..|....|+.+|..+|.+++.+++..++
T Consensus 77 ~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~ 156 (321)
T 1e6u_A 77 ADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGR 156 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHhCC
Confidence 88999999999999999999999999999999999987677889987543344453337999999999999999888899
Q ss_pred eEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCC-c
Q psy7590 161 TYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGG-D 239 (358)
Q Consensus 161 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~ 239 (358)
+++++||+++|||...+......+++.++..+...... | .
T Consensus 157 ~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------g~~ 197 (321)
T 1e6u_A 157 DYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQ---------------------------------------KAP 197 (321)
T ss_dssp EEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHH---------------------------------------TCS
T ss_pred CEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhc---------------------------------------CCC
Confidence 99999999999998765433345666676665543223 4 6
Q ss_pred eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCC-------CCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCC
Q psy7590 240 EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSV-------EPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAA 312 (358)
Q Consensus 240 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~-------~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~ 312 (358)
++.+++++.+.++|+|++|+|++++.+++++... .+++||+++++.+|+.|+++.+.+.+|.+.++...+.++
T Consensus 198 ~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 277 (321)
T 1e6u_A 198 DVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKP 277 (321)
T ss_dssp EEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSC
T ss_pred ceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCCC
Confidence 7888888999999999999999999999875432 124899999999999999999999999888777666544
Q ss_pred CCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcccc
Q psy7590 313 DGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSVAR 357 (358)
Q Consensus 313 ~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~~~ 357 (358)
.......+|++|+++ | ||+|. +++++|+++++|++++.+.+|
T Consensus 278 ~~~~~~~~d~~k~~~-l--G~~p~~~~~~~l~~~~~~~~~~~~~~~ 320 (321)
T 1e6u_A 278 DGTPRKLLDVTRLHQ-L--GWYHEISLEAGLASTYQWFLENQDRFR 320 (321)
T ss_dssp CCCSBCCBCCHHHHH-T--TCCCCCCHHHHHHHHHHHHHHTC----
T ss_pred CCcccccCCHHHHHh-c--CCccCCcHHHHHHHHHHHHHHHHHhhc
Confidence 445567899999999 8 99975 999999999999998876543
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=337.74 Aligned_cols=287 Identities=23% Similarity=0.366 Sum_probs=244.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC--ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET--WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN 76 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 76 (358)
|+|||||||||||++|++.|+++|++ .... ...++++.+|++ ++++.++++ ++|+|||+|+....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a~~~~~---- 75 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLN--DVDAVVHLAATRGS---- 75 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTT--TCSEEEECCCCCCS----
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhc--CCCEEEEccccCCC----
Confidence 59999999999999999999999983 2111 225677899999 999999999 69999999998652
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy7590 77 MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156 (358)
Q Consensus 77 ~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~ 156 (358)
.++...+++|+.++.+|+++|++.+++||||+||.++|+.....+++|++ +..|.+ .|+.+|+.+|++++.+++
T Consensus 76 -~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E~~~~~~~~ 149 (311)
T 3m2p_A 76 -QGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKE----LPLPDL-MYGVSKLACEHIGNIYSR 149 (311)
T ss_dssp -SSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTS----CCCCSS-HHHHHHHHHHHHHHHHHH
T ss_pred -CChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCC----CCCCCc-hhHHHHHHHHHHHHHHHH
Confidence 27778899999999999999999999999999999999988778899998 777877 799999999999999999
Q ss_pred hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccC
Q psy7590 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFT 236 (358)
Q Consensus 157 ~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (358)
+.|++++++||+++||+...+. . ++..++..+..
T Consensus 150 ~~g~~~~ilRp~~v~G~~~~~~----~----~~~~~~~~~~~-------------------------------------- 183 (311)
T 3m2p_A 150 KKGLCIKNLRFAHLYGFNEKNN----Y----MINRFFRQAFH-------------------------------------- 183 (311)
T ss_dssp HSCCEEEEEEECEEECSCC--C----C----HHHHHHHHHHT--------------------------------------
T ss_pred HcCCCEEEEeeCceeCcCCCCC----C----HHHHHHHHHHc--------------------------------------
Confidence 8899999999999999987642 2 33444444444
Q ss_pred CCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCC-CCCCc
Q psy7590 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTN-AADGQ 315 (358)
Q Consensus 237 ~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~-~~~~~ 315 (358)
|.++.+++++++.++|+|++|+|++++.+++++. .+++||+++++.+|+.|+++.+.+.+|.+.++...+. .....
T Consensus 184 -~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~ 260 (311)
T 3m2p_A 184 -GEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK--VSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGI 260 (311)
T ss_dssp -CCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT--CCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSC
T ss_pred -CCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC--CCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCc
Confidence 8888888899999999999999999999998765 3459999999999999999999999999888877665 45556
Q ss_pred cccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 316 LKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 316 ~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
....+|++|++++| ||+|+ +++++|+++++|++++.+.
T Consensus 261 ~~~~~d~~k~~~~l--G~~p~~~~~~~l~~~~~~~~~~~~~ 299 (311)
T 3m2p_A 261 HSSYMDSSKAKELL--DFSTDYNFATAVEEIHLLMRGLDDV 299 (311)
T ss_dssp CCBCBCCHHHHHHS--CCCCSCCHHHHHHHHHHHHCC----
T ss_pred CceecCHHHHHHHh--CCCcccCHHHHHHHHHHHHHhcccC
Confidence 67889999999999 99988 9999999999999887764
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=337.00 Aligned_cols=305 Identities=19% Similarity=0.251 Sum_probs=248.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhccCCcE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
|+++|+|||||||||||++|++.|+++|++ .... ...+.++.+|++|++++.++++..++|+
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITA 81 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcE
Confidence 555679999999999999999999999984 1111 1245667899999999999998767999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
|||+|+.... ......+...++.|+.++.++++++++.++++|||+||.++|+.....+++|++ +..|.+ .|+.
T Consensus 82 vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~----~~~~~~-~Y~~ 155 (341)
T 3enk_A 82 AIHFAALKAV-GESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETF----PLSATN-PYGQ 155 (341)
T ss_dssp EEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTS----CCBCSS-HHHH
T ss_pred EEECcccccc-CccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCC----CCCCCC-hhHH
Confidence 9999997542 123456678899999999999999999999999999999999988778899998 666766 7999
Q ss_pred HHHHHHHHHHHHHhhcC-ceEEEEecCcccCCCCCC------CCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCC
Q psy7590 143 AKRMLDVLNKAYYQQHG-VTYTSVIPCNVFGPHDNY------NLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGA 215 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~g-~~~~ilRp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (358)
+|..+|.+++.++...+ ++++++||+++|||.... ......+++.+.. . ...
T Consensus 156 sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~-~---~~~----------------- 214 (341)
T 3enk_A 156 TKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQ-V---AVG----------------- 214 (341)
T ss_dssp HHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHH-H---HHT-----------------
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHH-H---Hhc-----------------
Confidence 99999999999988876 999999999999996521 1101233332222 1 111
Q ss_pred CCCCCCccCCCcccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhcC-CCCCceEEccCCCcccH
Q psy7590 216 NSFGLDKLDLIPFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREYD-SVEPIILSVDEKDEVTI 288 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~v~n~~~~~~~s~ 288 (358)
...++.+++ ++.+.++|+|++|+|++++.++++.. ...+++||+++++.+|+
T Consensus 215 ---------------------~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~ 273 (341)
T 3enk_A 215 ---------------------KLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSV 273 (341)
T ss_dssp ---------------------SSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEH
T ss_pred ---------------------CCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeH
Confidence 035666777 78889999999999999999998732 12345999999999999
Q ss_pred HHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHhhcc
Q psy7590 289 AEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 289 ~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~~~~ 355 (358)
.|+++.+.+.+|.+.++...+.+........+|++|+++.| ||+| ++++++|+++++|++++.+.
T Consensus 274 ~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~~~l~~~~~~~~~~~~~ 339 (341)
T 3enk_A 274 LEVVRAFEKASGRAVPYELVARRPGDVAECYANPAAAAETI--GWKAERDLERMCADHWRWQENNPRG 339 (341)
T ss_dssp HHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHhCCCcceeeCCCCCCCccccccCHHHHHHHc--CCCCCCCHHHHHHHHHHHHHhcCcc
Confidence 99999999999999888877776666667889999999999 9997 59999999999999988753
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=331.09 Aligned_cols=292 Identities=21% Similarity=0.312 Sum_probs=236.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
||+|||||||||||++|+++|+++|+. .... ...+.++.+|+++ +++.++++ ++|+|||+|+....
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~--~~d~vih~a~~~~~- 76 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLK--GAEEVWHIAANPDV- 76 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHT--TCSEEEECCCCCCC-
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhc--CCCEEEECCCCCCh-
Confidence 458999999999999999999999852 1111 1235567899999 88999998 69999999996532
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
.....++...+++|+.++.+++++|++.++++|||+||.++|+.....+++|+. +..|.+ .|+.+|..+|.+++.
T Consensus 77 ~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~----~~~~~~-~Y~~sK~~~e~~~~~ 151 (313)
T 3ehe_A 77 RIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDY----PTHPIS-LYGASKLACEALIES 151 (313)
T ss_dssp C-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTS----CCCCCS-HHHHHHHHHHHHHHH
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCC----CCCCCC-HHHHHHHHHHHHHHH
Confidence 234567888999999999999999999999999999999999988778899988 677766 799999999999999
Q ss_pred HHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcc
Q psy7590 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPF 233 (358)
Q Consensus 154 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (358)
++.++|++++++||++||||.... .+++.++..+.. .
T Consensus 152 ~~~~~g~~~~ilRp~~v~G~~~~~-----~~~~~~~~~~~~---~----------------------------------- 188 (313)
T 3ehe_A 152 YCHTFDMQAWIYRFANVIGRRSTH-----GVIYDFIMKLKR---N----------------------------------- 188 (313)
T ss_dssp HHHHTTCEEEEEECSCEESTTCCC-----SHHHHHHHHHHH---C-----------------------------------
T ss_pred HHHhcCCCEEEEeeccccCcCCCc-----ChHHHHHHHHHc---C-----------------------------------
Confidence 999899999999999999997653 234444443332 1
Q ss_pred ccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCC--
Q psy7590 234 CFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNA-- 311 (358)
Q Consensus 234 ~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~-- 311 (358)
+.++.+++++.+.++|+|++|+|++++.+++.. ..+++||+++++++|+.|+++.+++.+|.+.++...+..
T Consensus 189 ----~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~ 262 (313)
T 3ehe_A 189 ----PEELEILGNGEQNKSYIYISDCVDAMLFGLRGD--ERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRG 262 (313)
T ss_dssp ----TTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC--SSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC-----
T ss_pred ----CCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC--CCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccC
Confidence 367788899999999999999999999999832 233599999999999999999999999998777665431
Q ss_pred -CCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhccc
Q psy7590 312 -ADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSVA 356 (358)
Q Consensus 312 -~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~~ 356 (358)
........+|++|+++ | ||+|+ +++++|+++++|++++.+..
T Consensus 263 ~~~~~~~~~~d~~k~~~-l--G~~p~~~~~e~l~~~~~~~~~~~~~~ 306 (313)
T 3ehe_A 263 WKGDVPVMLLSIEKLKR-L--GWKPRYNSEEAVRMAVRDLVEDLDEE 306 (313)
T ss_dssp -------CCBCCHHHHH-H--TCCCSCCHHHHHHHHHHHHHHHHHC-
T ss_pred CccccceeccCHHHHHH-c--CCCCCCCHHHHHHHHHHHHHhCcccc
Confidence 2233456789999965 7 99986 99999999999999988754
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=326.53 Aligned_cols=304 Identities=18% Similarity=0.236 Sum_probs=242.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----c-eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----W-IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
||+|||||||||||++|+++|+++|++ .... . ..+.++.+|++|++++.++++..++|+|||+|+....
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~ 80 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLV 80 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCc
Confidence 468999999999999999999999873 1111 0 1345678999999999999985569999999997542
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
.....++...+++|+.++.+|+++|++.++++|||+||.++|+.....+++|++ +..|.+ .|+.+|..+|.+++
T Consensus 81 -~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~----~~~~~~-~Y~~sK~~~e~~~~ 154 (330)
T 2c20_A 81 -GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEET----MTNPTN-TYGETKLAIEKMLH 154 (330)
T ss_dssp -HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTS----CCCCSS-HHHHHHHHHHHHHH
T ss_pred -cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCC----CCCCCC-hHHHHHHHHHHHHH
Confidence 112356778999999999999999999999999999999999977677899998 666666 79999999999999
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCC-----CcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNL-----ESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIP 227 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (358)
.+++++|++++++||+++||+...... ....+++.++. ....
T Consensus 155 ~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~----~~~~----------------------------- 201 (330)
T 2c20_A 155 WYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQ----VALG----------------------------- 201 (330)
T ss_dssp HHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHH----HHTT-----------------------------
T ss_pred HHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHH----HHhh-----------------------------
Confidence 998888999999999999999642110 01223333322 2111
Q ss_pred ccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhcCCC-CCceEEccCCCcccHHHHHHHHHHHhC
Q psy7590 228 FSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREYDSV-EPIILSVDEKDEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 228 ~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~~~~-~~~v~n~~~~~~~s~~ei~~~i~~~~g 300 (358)
.+.++.+++ ++.+.++|+|++|+|++++.+++++... ..++||+++++.+|+.|+++.+.+.+|
T Consensus 202 ---------~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g 272 (330)
T 2c20_A 202 ---------QREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTN 272 (330)
T ss_dssp ---------SSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTT
T ss_pred ---------cCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhC
Confidence 034566665 5678899999999999999999875432 246999999999999999999999999
Q ss_pred CCcceeecCCCCCCccccccchHHHHhhhCCCCccc--cHHHHHHHHHHHHHHhhcccc
Q psy7590 301 FKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT--PFQQAVQESVAWFRENHSVAR 357 (358)
Q Consensus 301 ~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~--~~~~~l~~~~~~~~~~~~~~~ 357 (358)
.+.++...+..........+|++|+++.| ||+|+ +++++|+++++|++++.+-.+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~l~~~l~~~~~~~~~~~~~~~ 329 (330)
T 2c20_A 273 HEIPAEVAPRRAGDPARLVASSQKAKEKL--GWDPRYVNVKTIIEHAWNWHQKQPNGYE 329 (330)
T ss_dssp SCCCEEEECCCSSCCSEECBCCHHHHHHH--CCCCSCCCHHHHHHHHHHHHHHCSSCCC
T ss_pred CCCceeeCCCCCCcccccccCHHHHHHHh--CCCCccCCHHHHHHHHHHHHHHhhhccC
Confidence 88777666554444556789999999999 99976 999999999999998876543
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=340.53 Aligned_cols=307 Identities=16% Similarity=0.234 Sum_probs=240.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHc-ccc------CCCC------ceeeecccccCC-CHHHHHHHHhccCCcEEEEcc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEE-EKR------DDET------WIFVSSKEADLS-NLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~-g~~------~~~~------~~~~~~~~~Dl~-~~~~~~~~~~~~~~d~Vih~a 67 (358)
|+||+|||||||||||++|+++|+++ |++ .... ...++++.+|++ |++++.++++ ++|+|||+|
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~--~~d~Vih~A 99 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK--KCDVILPLV 99 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH--HCSEEEECB
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc--cCCEEEEcC
Confidence 34679999999999999999999998 773 2111 135677799999 9999999998 599999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccC--CCC-CCCCcchHHHH
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN--GPP-HPSNFGYSHAK 144 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~--~~~-~p~~~~Y~~sK 144 (358)
+.... .....++...+++|+.++.+|+++|++.+ ++|||+||.+||+.....+++|+++.. .+. .|.+ .|+.+|
T Consensus 100 ~~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~-~Y~~sK 176 (372)
T 3slg_A 100 AIATP-ATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRW-IYACSK 176 (372)
T ss_dssp CCCCH-HHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTH-HHHHHH
T ss_pred ccccH-HHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCC-cHHHHH
Confidence 97652 12345777899999999999999999999 899999999999988777888877310 111 4544 799999
Q ss_pred HHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccC
Q psy7590 145 RMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLD 224 (358)
Q Consensus 145 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
+.+|++++.+++. |++++++||++||||..............++..++..+.+
T Consensus 177 ~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 229 (372)
T 3slg_A 177 QLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVR-------------------------- 229 (372)
T ss_dssp HHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHH--------------------------
T ss_pred HHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHc--------------------------
Confidence 9999999999888 9999999999999998653211111112234444444445
Q ss_pred CCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCC-CcccHHHHHHHHHHHhCCC
Q psy7590 225 LIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEK-DEVTIAEVAEAIANAFQFK 302 (358)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~-~~~s~~ei~~~i~~~~g~~ 302 (358)
+.++.+++++.+.++|+|++|+|++++.+++++.. ..+++||++++ +.+|+.|+++.+.+.+|.+
T Consensus 230 -------------~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~ 296 (372)
T 3slg_A 230 -------------GENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF 296 (372)
T ss_dssp -------------TCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHC
T ss_pred -------------CCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCC
Confidence 88899999999999999999999999999998642 23459999994 8999999999999999976
Q ss_pred cceeecCC---------------CCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 303 GRITFDTN---------------AADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 303 ~~i~~~~~---------------~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
.++...+. .........+|++|+++.| ||+|+ +++++|+++++||+++.+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~~~~~~~~~~~ 363 (372)
T 3slg_A 297 PEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQEL--GWAPQFTFDDALRQIFEAYRGHVAD 363 (372)
T ss_dssp TTTHHHHHTCCEEEC-------------CCCCBCCHHHHHHH--TCCCCCCHHHHHHHHHHHHTTCHHH
T ss_pred cccccccccceeeeccccccccCCccccceeecCHHHHHHHc--CCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 55332110 0023345678999999999 99977 9999999999999887653
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=330.46 Aligned_cols=298 Identities=16% Similarity=0.218 Sum_probs=241.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC----C------------ceeeecccccCCCHHHHHHHHhccCC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----T------------WIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----~------------~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
+||+|||||||||||++|+++|+++|++ ... . ...+.++.+|++|++++.++++ ++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GV 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--CC
Confidence 4679999999999999999999999873 111 0 1345667899999999999998 69
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
|+|||+|+.... .....++...+++|+.++.+++++|.+.++++|||+||.++|+.....+++|++ +..|.+ .|
T Consensus 104 d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~----~~~~~~-~Y 177 (352)
T 1sb8_A 104 DYVLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDT----IGKPLS-PY 177 (352)
T ss_dssp SEEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTC----CCCCCS-HH
T ss_pred CEEEECCcccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCC----CCCCCC-hh
Confidence 999999997531 123356778999999999999999999999999999999999987667889988 666766 79
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
+.+|..+|.+++.+++..|++++++||++|||+..........+++.++..+ .+
T Consensus 178 ~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~----~~---------------------- 231 (352)
T 1sb8_A 178 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSM----IQ---------------------- 231 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHH----HH----------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHH----HC----------------------
Confidence 9999999999999988889999999999999998654321223344444433 34
Q ss_pred CccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh-
Q psy7590 221 DKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF- 299 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~- 299 (358)
+.++.+++++.+.++|+|++|+|++++.++.+.....+++||+++++.+|+.|+++.+.+.+
T Consensus 232 -----------------~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~ 294 (352)
T 1sb8_A 232 -----------------GDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLA 294 (352)
T ss_dssp -----------------TCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHH
T ss_pred -----------------CCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHH
Confidence 77777788888999999999999999999876322334699999999999999999999999
Q ss_pred --CCCcce--eecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 300 --QFKGRI--TFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 300 --g~~~~i--~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
|.+.++ .+.+.+........+|++|++++| ||+|+ +++++|+++++|++++.
T Consensus 295 ~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~e~l~~~~~~~~~~~ 351 (352)
T 1sb8_A 295 ENGVSYHREPVYRDFREGDVRHSLADISKAAKLL--GYAPKYDVSAGVALAMPWYIMFL 351 (352)
T ss_dssp HTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHT--CCCCCCCHHHHHHHHHHHHHHHT
T ss_pred hcCCCCCCCceecCCCccchhhccCCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHhc
Confidence 887653 233333333445678999999999 99975 99999999999998764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=330.52 Aligned_cols=296 Identities=18% Similarity=0.216 Sum_probs=241.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNM 77 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 77 (358)
+|+|||||||||||++|++.|+++|++ .... ..+.++.+|++|++++.++++ ++|+|||+|+.... ..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~A~~~~~---~~ 92 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-TGGEEVVGSLEDGQALSDAIM--GVSAVLHLGAFMSW---AP 92 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-SCCSEEESCTTCHHHHHHHHT--TCSEEEECCCCCCS---SG
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-CCccEEecCcCCHHHHHHHHh--CCCEEEECCcccCc---ch
Confidence 468999999999999999999999984 2211 455667999999999999999 69999999997652 23
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecC--CCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHH
Q psy7590 78 SHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPD--KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYY 155 (358)
Q Consensus 78 ~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~--~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~ 155 (358)
......+++|+.++.+|+++|++.++++|||+||.+||+. ....+++|++ +..|.+ .|+.+|..+|.+++.++
T Consensus 93 ~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~----~~~~~~-~Y~~sK~~~E~~~~~~~ 167 (347)
T 4id9_A 93 ADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDH----PLCPNS-PYGLTKLLGEELVRFHQ 167 (347)
T ss_dssp GGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTS----CCCCCS-HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCC----CCCCCC-hHHHHHHHHHHHHHHHH
Confidence 3447899999999999999999999999999999999998 4567899998 677776 79999999999999999
Q ss_pred hhcCceEEEEecCccc-------------CCCCCCCCC---cccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 156 QQHGVTYTSVIPCNVF-------------GPHDNYNLE---SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 156 ~~~g~~~~ilRp~~v~-------------G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
+..+++++++||+++| ||....... .......++..++.....
T Consensus 168 ~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 226 (347)
T 4id9_A 168 RSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDI--------------------- 226 (347)
T ss_dssp HHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCC---------------------
T ss_pred HhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHc---------------------
Confidence 9889999999999999 664321000 000001244445544444
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeee----eeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHH
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQF----IYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAI 295 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i 295 (358)
|.++.+++++.+.++| +|++|+|++++.+++++... +++||+++++.+|+.|+++.+
T Consensus 227 ------------------~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i 287 (347)
T 4id9_A 227 ------------------GEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAA-GGTFNLGADEPADFAALLPKI 287 (347)
T ss_dssp ------------------SSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGT-TEEEEESCSSCEEHHHHHHHH
T ss_pred ------------------CCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccC-CCeEEECCCCcccHHHHHHHH
Confidence 7788888888888999 99999999999999986433 359999999999999999999
Q ss_pred HHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 296 ANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 296 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
.+.+|.+.++...+.... ...+|++|++++| ||+|+ +++++|+++++|++++.+.
T Consensus 288 ~~~~g~~~~~~~~p~~~~---~~~~d~~k~~~~l--G~~p~~~~~~~l~~~~~~~~~~~~~ 343 (347)
T 4id9_A 288 AALTGLPIVTVDFPGDGV---YYHTSNERIRNTL--GFEAEWTMDRMLEEAATARRQRLAK 343 (347)
T ss_dssp HHHHCCCEEEEECSSCCC---BCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHCC-
T ss_pred HHHhCCCCceeeCCCccc---ccccCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHhhhhc
Confidence 999999877765544332 6788999999999 99986 9999999999999988764
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=324.28 Aligned_cols=289 Identities=24% Similarity=0.279 Sum_probs=234.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|+|||||||||||++|++.|+++|++ .... ...+.++.+|++|++ +.++++ + |+|||+|+....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~--~-d~vih~A~~~~~- 75 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIK--G-DVVFHFAANPEV- 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCC--C-SEEEECCSSCSS-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcC--C-CEEEECCCCCCc-
Confidence 48999999999999999999999984 1111 123556789999998 887777 3 999999996432
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
.....++...+++|+.++.+++++|++.++++|||+||.++|+.....+++|+. +..|.+ .|+.+|..+|.+++.
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~----~~~p~~-~Y~~sK~~~e~~~~~ 150 (312)
T 3ko8_A 76 RLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEE----PYKPIS-VYGAAKAAGEVMCAT 150 (312)
T ss_dssp SGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTS----CCCCCS-HHHHHHHHHHHHHHH
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCC----CCCCCC-hHHHHHHHHHHHHHH
Confidence 244567888999999999999999999999999999999999988778899998 777777 799999999999999
Q ss_pred HHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcc
Q psy7590 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPF 233 (358)
Q Consensus 154 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (358)
+++++|++++++||+++|||.... .+++.++..+.. .
T Consensus 151 ~~~~~g~~~~~lrp~~v~g~~~~~-----~~~~~~~~~~~~---~----------------------------------- 187 (312)
T 3ko8_A 151 YARLFGVRCLAVRYANVVGPRLRH-----GVIYDFIMKLRR---N----------------------------------- 187 (312)
T ss_dssp HHHHHCCEEEEEEECEEECTTCCS-----SHHHHHHHHHHH---C-----------------------------------
T ss_pred HHHHhCCCEEEEeeccccCcCCCC-----ChHHHHHHHHHh---C-----------------------------------
Confidence 999889999999999999997653 233344443322 1
Q ss_pred ccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHh---cCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCC
Q psy7590 234 CFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLRE---YDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTN 310 (358)
Q Consensus 234 ~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~---~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~ 310 (358)
+.++.+++++.+.++|+|++|+|++++.++++ ... .+++||+++++.+|+.|+++.+.+.+|.+.++...+.
T Consensus 188 ----~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 262 (312)
T 3ko8_A 188 ----PNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDA-PFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPS 262 (312)
T ss_dssp ----TTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCC-SEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC--
T ss_pred ----CCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCC-CCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCc
Confidence 35777888999999999999999999999988 222 3358999999999999999999999998887776443
Q ss_pred ------CCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 311 ------AADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 311 ------~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
.+.......+|++|+++.| ||+|+ +++++|+++++|++++.
T Consensus 263 ~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~~~l~~~~~~~~~~~ 310 (312)
T 3ko8_A 263 TPDGRGWPGDVKYMTLAVTKLMKLT--GWRPTMTSAEAVKKTAEDLAKEL 310 (312)
T ss_dssp --------CCCSEECBCCHHHHHHH--CCCCSSCHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCccccccCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHhhh
Confidence 1223445679999999999 99987 99999999999998764
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=320.72 Aligned_cols=294 Identities=18% Similarity=0.247 Sum_probs=239.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN 76 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 76 (358)
+|+|||||||||||++|+++|+++|++ .... ...+.++.+|++|++++.++++..++|+|||+|+.... ...
T Consensus 12 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~-~~~ 90 (321)
T 2pk3_A 12 SMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSV-KDS 90 (321)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCH-HHH
T ss_pred cceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccch-hhh
Confidence 579999999999999999999999973 1111 01455678999999999999986569999999997542 123
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccceecCC--CCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 77 MSHNLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTCIFPDK--TTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 77 ~~~~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~vy~~~--~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
..++...+++|+.++.+++++|.+. ++++|||+||.++|+.. ...+++|++ +..|.+ .|+.+|..+|.+++.
T Consensus 91 ~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~----~~~~~~-~Y~~sK~~~E~~~~~ 165 (321)
T 2pk3_A 91 WLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEEN----QLRPMS-PYGVSKASVGMLARQ 165 (321)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTS----CCBCCS-HHHHHHHHHHHHHHH
T ss_pred hhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCC----CCCCCC-ccHHHHHHHHHHHHH
Confidence 4577889999999999999999876 58899999999999876 567889988 666666 799999999999999
Q ss_pred HHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcc
Q psy7590 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPF 233 (358)
Q Consensus 154 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (358)
+++..|++++++||+++|||..... .+++.++..+.. ...
T Consensus 166 ~~~~~gi~~~ilrp~~v~g~~~~~~----~~~~~~~~~~~~-~~~----------------------------------- 205 (321)
T 2pk3_A 166 YVKAYGMDIIHTRTFNHIGPGQSLG----FVTQDFAKQIVD-IEM----------------------------------- 205 (321)
T ss_dssp HHHHHCCEEEEEEECEEECTTCCTT----SHHHHHHHHHHH-HHT-----------------------------------
T ss_pred HHHHcCCCEEEEEeCcccCcCCCCC----chHHHHHHHHHH-Hhc-----------------------------------
Confidence 9888899999999999999986532 344555554433 222
Q ss_pred ccCCC--ceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecC--
Q psy7590 234 CFTGG--DEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDT-- 309 (358)
Q Consensus 234 ~~~~g--~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~-- 309 (358)
| .++.+++++.+.++|+|++|+|++++.++.++.. +++||++++..+|+.|+++.+.+.+|.+.++...+
T Consensus 206 ----g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~--g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~ 279 (321)
T 2pk3_A 206 ----EKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYGKT--GDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ 279 (321)
T ss_dssp ----TSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHCCT--TCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG
T ss_pred ----CCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCCCC--CCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc
Confidence 4 4667778888899999999999999999988632 34899999999999999999999999887666544
Q ss_pred CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHH
Q psy7590 310 NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRE 351 (358)
Q Consensus 310 ~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~ 351 (358)
.+........+|++|++++| ||+|+ +++++|+++++|+++
T Consensus 280 ~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~e~l~~~~~~~~~ 320 (321)
T 2pk3_A 280 LRPSEVPTLIGSNKRLKDST--GWKPRIPLEKSLFEILQSYRQ 320 (321)
T ss_dssp CCSSCCSBCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHT
T ss_pred CCCcccchhccCHHHHHHHc--CCCcCCCHHHHHHHHHHHHhc
Confidence 22333456788999999999 99987 999999999999975
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-42 Score=321.07 Aligned_cols=291 Identities=25% Similarity=0.313 Sum_probs=238.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC-CCc----eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD-ETW----IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~-~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|+|||||||||||++|+++|+++|++ .. ... ..+.++.+|++|++++.++++..++|+|||+|+....
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~- 79 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV- 79 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH-
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc-
Confidence 48999999999999999999999874 11 111 1345668999999999999986679999999997541
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc-ceecC-CCCCCCccccccCCCCCCCCcchHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST-CIFPD-KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLN 151 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~-~vy~~-~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~ 151 (358)
.....++...+++|+.++.+++++|++.++++|||+||. ++|+. ....+++|++ +..|.+ .|+.+|..+|.++
T Consensus 80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~----~~~~~~-~Y~~sK~~~e~~~ 154 (311)
T 2p5y_A 80 KVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETW----PPRPKS-PYAASKAAFEHYL 154 (311)
T ss_dssp HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTS----CCCCCS-HHHHHHHHHHHHH
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCC----CCCCCC-hHHHHHHHHHHHH
Confidence 123356778999999999999999999999999999999 99986 4456788887 666666 7999999999999
Q ss_pred HHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCC
Q psy7590 152 KAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLF 231 (358)
Q Consensus 152 ~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (358)
+.+++.+|++++++||+++|||....... ..+++.++.. ..+
T Consensus 155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~----~~~--------------------------------- 196 (311)
T 2p5y_A 155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGE-AGVVAIFAER----VLK--------------------------------- 196 (311)
T ss_dssp HHHHHHHCCCEEEEEECEEECTTCCSSST-THHHHHHHHH----HHH---------------------------------
T ss_pred HHHHHHcCCCEEEEeeccccCcCCCCCCc-CcHHHHHHHH----HHc---------------------------------
Confidence 99988889999999999999998654221 2234444433 334
Q ss_pred ccccCCCceEEEc-----CCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCccee
Q psy7590 232 PFCFTGGDEFKVL-----GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 232 ~~~~~~g~~~~~~-----~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
+.++.++ +++.+.++|+|++|+|++++.+++++ +++||++++..+|+.|+++.+.+.+|.+.++.
T Consensus 197 ------~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~ 266 (311)
T 2p5y_A 197 ------GLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL----EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQ 266 (311)
T ss_dssp ------TCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC----CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEE
T ss_pred ------CCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC----CCEEEeCCCCCccHHHHHHHHHHHhCCCCCce
Confidence 7777777 78888999999999999999999874 35899999999999999999999999888777
Q ss_pred ecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHh
Q psy7590 307 FDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFREN 352 (358)
Q Consensus 307 ~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~ 352 (358)
..+.+........+|++|+++ | ||+|. +++++|+++++|++++
T Consensus 267 ~~~~~~~~~~~~~~d~~k~~~-l--g~~p~~~~~~~l~~~~~~~~~~ 310 (311)
T 2p5y_A 267 PAPPRPGDLERSVLSPLKLMA-H--GWRPKVGFQEGIRLTVDHFRGA 310 (311)
T ss_dssp EECCCTTCCSBCCBCCHHHHT-T--TCCCSSCHHHHHHHHHHHHHTC
T ss_pred eCCCCccchhhccCCHHHHHH-C--CCCCCCCHHHHHHHHHHHHHhh
Confidence 666554445567899999999 9 99974 9999999999999753
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-42 Score=330.80 Aligned_cols=289 Identities=18% Similarity=0.201 Sum_probs=236.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH--cccc------CCC-------------C-----ceeeecccccCCCHHHHHHH-Hh
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKE--EEKR------DDE-------------T-----WIFVSSKEADLSNLESTQQL-FS 56 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~--~g~~------~~~-------------~-----~~~~~~~~~Dl~~~~~~~~~-~~ 56 (358)
+|+|||||||||||++|++.|++ .|++ ... . ...+.++.+|++|++++.++ ..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 89 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKL 89 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhcc
Confidence 57999999999999999999999 7873 111 0 11235678999999999998 44
Q ss_pred ccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 57 KYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 57 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
++|+|||+|+... ....++...+++|+.++.+++++|++.+++ |||+||.++|+.... +++|++ +..|.
T Consensus 90 --~~D~vih~A~~~~---~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~----~~~p~ 158 (362)
T 3sxp_A 90 --HFDYLFHQAAVSD---TTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGK----NESPE 158 (362)
T ss_dssp --CCSEEEECCCCCG---GGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTS----CCCCS
T ss_pred --CCCEEEECCccCC---ccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCC----CCCCC
Confidence 7999999999764 355788899999999999999999999986 999999999998765 899998 77787
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
+ .|+.+|..+|.+++.++.. ++++++||+++|||..........+++.++.. ...
T Consensus 159 ~-~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~----~~~------------------ 213 (362)
T 3sxp_A 159 N-VYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALG----AMA------------------ 213 (362)
T ss_dssp S-HHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHH----HHT------------------
T ss_pred C-hhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHH----HHh------------------
Confidence 7 7999999999999998765 89999999999999875432222344444443 344
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
+.++.+++++.+.++|+|++|+|++++.+++++.. + +||++++..+|+.|+++.+.
T Consensus 214 ---------------------~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~~--g-~~~i~~~~~~s~~e~~~~i~ 269 (362)
T 3sxp_A 214 ---------------------FKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKS--G-VYNVGYSQARSYNEIVSILK 269 (362)
T ss_dssp ---------------------TSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSSC--E-EEEESCSCEEEHHHHHHHHH
T ss_pred ---------------------CCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCCC--C-EEEeCCCCCccHHHHHHHHH
Confidence 78888888888999999999999999999987543 3 89999999999999999999
Q ss_pred HHhCCCcceeecCCC-CCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 297 NAFQFKGRITFDTNA-ADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 297 ~~~g~~~~i~~~~~~-~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
+.+| +.++...+.+ ........+|++|+++.| ||+|. +++++|+++++|++++.+.
T Consensus 270 ~~~g-~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~~~~~~~~~~~ 327 (362)
T 3sxp_A 270 EHLG-DFKVTYIKNPYAFFQKHTQAHIEPTILDL--DYTPLYDLESGIKDYLPHIHAIFKG 327 (362)
T ss_dssp HHHC-CCEEECCC-------CCCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHTCC---
T ss_pred HHcC-CCceEECCCCCcCcccceecCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 9999 7777766655 444566789999999999 99977 9999999999999876553
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=323.33 Aligned_cols=293 Identities=22% Similarity=0.293 Sum_probs=235.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc--ccc------CCC--C--------ceeeecccccCCCHHHHHHHHhccCCcE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE--EKR------DDE--T--------WIFVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~--g~~------~~~--~--------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
|++||+|||||||||||++|+++|+++ |++ ... . ...+.++.+|++|++++.++++ ++|+
T Consensus 1 Ms~m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 78 (348)
T 1oc2_A 1 MSQFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA--KADA 78 (348)
T ss_dssp --CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSE
T ss_pred CCcCcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh--cCCE
Confidence 666889999999999999999999998 653 110 0 1245667899999999999998 5899
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCC------------CCCccccccC
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT------------YPIDETMVHN 130 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~------------~~~~E~~~~~ 130 (358)
|||+|+.... .....++...+++|+.++.+++++|.+.++ +|||+||.++|+.... .+++|++
T Consensus 79 vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~--- 153 (348)
T 1oc2_A 79 IVHYAAESHN-DNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET--- 153 (348)
T ss_dssp EEECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS---
T ss_pred EEECCcccCc-cchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCC---
Confidence 9999997541 122356778999999999999999999998 9999999999986532 5788887
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRAR 210 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (358)
+..|.+ .|+.+|..+|.+++.++..+|++++++||+++||+..... .+++.++..+ ..
T Consensus 154 -~~~~~~-~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~----~~~~~~~~~~----~~------------ 211 (348)
T 1oc2_A 154 -NYNPSS-PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE----KFIPRQITNI----LA------------ 211 (348)
T ss_dssp -CCCCCS-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT----SHHHHHHHHH----HH------------
T ss_pred -CCCCCC-ccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc----chHHHHHHHH----Hc------------
Confidence 666666 7999999999999999888899999999999999986431 2344444333 33
Q ss_pred CCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHH
Q psy7590 211 FPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAE 290 (358)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~e 290 (358)
+.++.+++++.+.++|+|++|+|++++.++++... +++||++++..+|+.|
T Consensus 212 ---------------------------~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--g~~~~i~~~~~~s~~e 262 (348)
T 1oc2_A 212 ---------------------------GIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRM--GETYLIGADGEKNNKE 262 (348)
T ss_dssp ---------------------------TCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCT--TCEEEECCSCEEEHHH
T ss_pred ---------------------------CCCceEecCCCceEeeEEHHHHHHHHHHHhhCCCC--CCeEEeCCCCCCCHHH
Confidence 77777788888899999999999999999987532 3489999999999999
Q ss_pred HHHHHHHHhCCCcc-eeecCCCCCCccccccchHHHHhhhCCCCccc-c-HHHHHHHHHHHHHHhh
Q psy7590 291 VAEAIANAFQFKGR-ITFDTNAADGQLKKTASNRKLRELRGPGFEFT-P-FQQAVQESVAWFRENH 353 (358)
Q Consensus 291 i~~~i~~~~g~~~~-i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~-~~~~l~~~~~~~~~~~ 353 (358)
+++.+.+.+|.+.. +.+.+.++.......+|++|+++.| ||+|+ + ++++|+++++|++++.
T Consensus 263 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~~~~l~~~~~~~~~~~ 326 (348)
T 1oc2_A 263 VLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDEL--GWTPQFTDFSEGLEETIQWYTDNQ 326 (348)
T ss_dssp HHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHH--CCCCSCCCHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHHc--CCCCCCCcHHHHHHHHHHHHHHhh
Confidence 99999999998753 4443333333345678999999999 99976 7 9999999999998764
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=322.74 Aligned_cols=279 Identities=19% Similarity=0.286 Sum_probs=232.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----C---c------eeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----T---W------IFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----~---~------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
||+|||||||||||++|+++|+++|++ ... . . ..++++.+|++ ++|+||
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~------------~~d~vi 74 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS------------DVRLVY 74 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT------------TEEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc------------cCCEEE
Confidence 679999999999999999999999973 111 0 0 11223333433 599999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHH
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
|+|+.... .....++...++ |+.++.+++++|+++++++|||+||.++|+.....+++|++ +..|.+ .|+.+|
T Consensus 75 ~~a~~~~~-~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~----~~~p~~-~Y~~sK 147 (321)
T 3vps_A 75 HLASHKSV-PRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDS----PLSPRS-PYAASK 147 (321)
T ss_dssp ECCCCCCH-HHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTS----CCCCCS-HHHHHH
T ss_pred ECCccCCh-HHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCC----CCCCCC-hhHHHH
Confidence 99997642 123456666777 99999999999999999999999999999988778999998 777777 799999
Q ss_pred HHHHHHHHHHHhhcCc-eEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCcc
Q psy7590 145 RMLDVLNKAYYQQHGV-TYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223 (358)
Q Consensus 145 ~~~E~~~~~~~~~~g~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
..+|.+++.+++.+++ +++++||+++|||..... .+++.++.. ...
T Consensus 148 ~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~----~~~~~~~~~----~~~------------------------- 194 (321)
T 3vps_A 148 VGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPD----ALVPRLCAN----LLT------------------------- 194 (321)
T ss_dssp HHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTT----SHHHHHHHH----HHH-------------------------
T ss_pred HHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCC----ChHHHHHHH----HHc-------------------------
Confidence 9999999999998899 999999999999987642 334444443 344
Q ss_pred CCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCc
Q psy7590 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKG 303 (358)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~ 303 (358)
+.++.+++++.+.++|+|++|+|++++.++.++.. + +||+++++.+|+.|+++.+. .+|.+.
T Consensus 195 --------------~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~--g-~~~i~~~~~~s~~e~~~~i~-~~g~~~ 256 (321)
T 3vps_A 195 --------------RNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP--S-VVNFGSGQSLSVNDVIRILQ-ATSPAA 256 (321)
T ss_dssp --------------HSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC--S-EEEESCSCCEEHHHHHHHHH-TTCTTC
T ss_pred --------------CCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC--C-eEEecCCCcccHHHHHHHHH-HhCCCC
Confidence 77888899999999999999999999999998655 3 89999999999999999999 999998
Q ss_pred ceeecCCCCCCccccccchHHHHhhhCCCCcc--ccHHHHHHHHHHHHHHhhc
Q psy7590 304 RITFDTNAADGQLKKTASNRKLRELRGPGFEF--TPFQQAVQESVAWFRENHS 354 (358)
Q Consensus 304 ~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~--~~~~~~l~~~~~~~~~~~~ 354 (358)
++...+..........+|++|+++.| ||+| ++++++|+++++|++++..
T Consensus 257 ~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~~~~l~~~~~~~~~~~~ 307 (321)
T 3vps_A 257 EVARKQPRPNEITEFRADTALQTRQI--GERSGGIGIEEGIRLTLEWWQSRDL 307 (321)
T ss_dssp EEEEECCCTTCCSBCCBCCHHHHHHH--CCCSCCCCHHHHHHHHHHHHHTSCT
T ss_pred ccccCCCCCCCcceeeccHHHHHHHh--CCCCCcCCHHHHHHHHHHHHHhCCC
Confidence 88877776666778899999999999 9999 6999999999999988753
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=320.74 Aligned_cols=298 Identities=21% Similarity=0.281 Sum_probs=238.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------------ceeeecccccCCCHHHHHHHHhccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------------WIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------------~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
|+|||||||||||++|+++|+++|++ .... ...+.++.+|++|++++.++++..++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCC
Confidence 59999999999999999999999874 1111 12345678999999999999986569
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCC-CCcc
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP-SNFG 139 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p-~~~~ 139 (358)
|+|||+|+.... .....++...+++|+.++.+++++|++.++++|||+||.++|+.....+++|++ +..| .+ .
T Consensus 83 d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~----~~~p~~~-~ 156 (348)
T 1ek6_A 83 MAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAH----PTGGCTN-P 156 (348)
T ss_dssp EEEEECCSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTS----CCCCCSS-H
T ss_pred CEEEECCCCcCc-cchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCC----CCCCCCC-c
Confidence 999999997532 123356778999999999999999999999999999999999987677899988 5566 44 8
Q ss_pred hHHHHHHHHHHHHHHHhhcC--ceEEEEecCcccCCCCCCC----C--CcccchhHHHHHHHHhhh-hcCccchhhcccC
Q psy7590 140 YSHAKRMLDVLNKAYYQQHG--VTYTSVIPCNVFGPHDNYN----L--ESSHVIPGLIRKLYDTIE-KGKDQSVFESRAR 210 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~g--~~~~ilRp~~v~G~~~~~~----~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 210 (358)
|+.+|..+|.+++.+++. + ++++++||+++|||..... . ....+++.++ .... .
T Consensus 157 Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~----~~~~~~------------ 219 (348)
T 1ek6_A 157 YGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVS----QVAIGR------------ 219 (348)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHH----HHHHTS------------
T ss_pred hHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHH----HHHHhc------------
Confidence 999999999999998876 5 9999999999999953110 0 0123333332 2222 2
Q ss_pred CCCCCCCCCCCccCCCcccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhcC-CCCCceEEccCC
Q psy7590 211 FPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREYD-SVEPIILSVDEK 283 (358)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~v~n~~~~ 283 (358)
+.++.+++ ++.+.++|+|++|+|++++.+++++. ..+.++||++++
T Consensus 220 ---------------------------~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~ 272 (348)
T 1ek6_A 220 ---------------------------REALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTG 272 (348)
T ss_dssp ---------------------------SSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCS
T ss_pred ---------------------------CCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCC
Confidence 56677766 56788999999999999999998763 222259999999
Q ss_pred CcccHHHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 284 DEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 284 ~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+.+|+.|+++.+.+.+|.+.++...+..........+|++|++++| ||+|+ +++++|+++++|++++.+
T Consensus 273 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~~~l~~~~~w~~~~~~ 342 (348)
T 1ek6_A 273 TGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEEL--GWTAALGLDRMCEDLWRWQKQNPS 342 (348)
T ss_dssp CCEEHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHTT--CCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred CCccHHHHHHHHHHHhCCCCceeeCCCCCccchhhccCHHHHHHhc--CCCCCCCHHHHHHHHHHHHHhccc
Confidence 9999999999999999988777666554444556788999999999 99975 999999999999998754
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=319.53 Aligned_cols=293 Identities=21% Similarity=0.275 Sum_probs=233.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcc--cc------CC--CC---------ceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEE--KR------DD--ET---------WIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g--~~------~~--~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
|+ +|+|||||||||||++|+++|+++| ++ .. .. ...+.++.+|++|++++.+++. ++|
T Consensus 1 M~-~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d 77 (336)
T 2hun_A 1 MH-SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR--KVD 77 (336)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH--TCS
T ss_pred CC-CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh--CCC
Confidence 44 4689999999999999999999986 42 11 00 1235567899999999999996 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC-CEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV-KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
+|||+|+.... .....++..++++|+.++.+++++|.+.+. ++|||+||.++|+.....+++|++ +..|.+ .|
T Consensus 78 ~vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~----~~~~~~-~Y 151 (336)
T 2hun_A 78 GVVHLAAESHV-DRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTEND----RLMPSS-PY 151 (336)
T ss_dssp EEEECCCCCCH-HHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTB----CCCCCS-HH
T ss_pred EEEECCCCcCh-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCC----CCCCCC-cc
Confidence 99999997531 122356778999999999999999999875 699999999999977667889988 666666 79
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
+.+|..+|.+++.++..+|++++++||++|||+..... .+++.++.. ..+
T Consensus 152 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~----~~~~~~~~~----~~~---------------------- 201 (336)
T 2hun_A 152 SATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPE----KLIPKTIIR----ASL---------------------- 201 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTT----SHHHHHHHH----HHT----------------------
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC----chHHHHHHH----HHc----------------------
Confidence 99999999999999888899999999999999986431 234444433 334
Q ss_pred CccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhC
Q psy7590 221 DKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g 300 (358)
+.++.+++++.+.++|+|++|+|++++.++++... +++||++++..+|+.|+++.+.+.+|
T Consensus 202 -----------------~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g 262 (336)
T 2hun_A 202 -----------------GLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES--REIYNISAGEEKTNLEVVKIILRLMG 262 (336)
T ss_dssp -----------------TCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCSCEECHHHHHHHHHHHTT
T ss_pred -----------------CCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCC--CCEEEeCCCCcccHHHHHHHHHHHhC
Confidence 77788888888899999999999999999987532 34899999999999999999999999
Q ss_pred CCcc-eeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 301 FKGR-ITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 301 ~~~~-i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
.+.+ +...+.+........+|++|++++| ||+|. +++++|+++++|++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~~~l~~~~~~~~~~~ 315 (336)
T 2hun_A 263 KGEELIELVEDRPGHDLRYSLDSWKITRDL--KWRPKYTFDEGIKKTIDWYLKNE 315 (336)
T ss_dssp CCSTTEEEECCCTTCCCCCCBCCHHHHHHH--CCCCSSCHHHHHHHHHHHHHHTH
T ss_pred CCcccccccCCCCCchhhhcCCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHhCc
Confidence 8653 4444433333345678999999999 99975 99999999999998764
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=325.03 Aligned_cols=298 Identities=19% Similarity=0.304 Sum_probs=238.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
+||+|||||||||||++|+++|+++|++ .... ...+.++.+|++|++++.++++ ++|+|||+|+...
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~--~~d~Vih~A~~~~ 105 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE--GVDHVFNLAADMG 105 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT--TCSEEEECCCCCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhC--CCCEEEECceecC
Confidence 3679999999999999999999999873 1111 1245667899999999999998 6999999999754
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCC-----CCCccccccCCCCCCCCcchHHHHHH
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT-----YPIDETMVHNGPPHPSNFGYSHAKRM 146 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~-----~~~~E~~~~~~~~~p~~~~Y~~sK~~ 146 (358)
.......++...+++|+.++.+++++|++.++++|||+||.++|+.... .+++|+++. +..|.+ .|+.+|..
T Consensus 106 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~--~~~~~~-~Y~~sK~~ 182 (379)
T 2c5a_A 106 GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW--PAEPQD-AFGLEKLA 182 (379)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS--SBCCSS-HHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC--CCCCCC-hhHHHHHH
Confidence 2111146778899999999999999999999999999999999985422 346776532 334445 79999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCC
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
+|.+++.+++.+|++++++||+++||+..........+++.++..+. .
T Consensus 183 ~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~----~---------------------------- 230 (379)
T 2c5a_A 183 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQ----T---------------------------- 230 (379)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHH----H----------------------------
T ss_pred HHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHH----h----------------------------
Confidence 99999999888899999999999999986543222234455554443 3
Q ss_pred cccCCccccCCCce-EEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcce
Q psy7590 227 PFSLFPFCFTGGDE-FKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI 305 (358)
Q Consensus 227 ~~~~~~~~~~~g~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i 305 (358)
+.+ +.+++++.+.++|+|++|+|++++.+++++ . .++||+++++.+|+.|+++.+.+.+|.+.++
T Consensus 231 -----------~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~-~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~ 296 (379)
T 2c5a_A 231 -----------STDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-F--REPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 296 (379)
T ss_dssp -----------CSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS-C--CSCEEECCCCCEEHHHHHHHHHHTTTCCCCE
T ss_pred -----------CCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc-C--CCeEEeCCCCccCHHHHHHHHHHHhCCCCce
Confidence 555 778888888999999999999999999875 2 3489999999999999999999999988777
Q ss_pred eecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 306 TFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
...+.+. ......+|++|++++| ||+|+ +++++|+++++|++++.+
T Consensus 297 ~~~p~~~-~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~~~~~~~~~~ 343 (379)
T 2c5a_A 297 HHIPGPE-GVRGRNSDNNLIKEKL--GWAPNMRLKEGLRITYFWIKEQIE 343 (379)
T ss_dssp EEECCCC-CCSBCEECCHHHHHHH--SCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCC-CcccccCCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHhHh
Confidence 6555422 2344678999999999 99986 999999999999987754
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=317.54 Aligned_cols=296 Identities=17% Similarity=0.122 Sum_probs=238.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
+|+|||||||||||++|+++|+++|++ .... ...+.++.+|++|++++.+++++.++|+|||+
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 93 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 579999999999999999999999873 2111 12456778999999999999987678999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC-CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV-KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
|+.... .....++...+++|+.++.+|+++|.+.++ ++|||+||.++|+.....+++|++ +..|.+ .|+.+|.
T Consensus 94 A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~----~~~p~~-~Y~~sK~ 167 (335)
T 1rpn_A 94 AAQSFV-GASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENT----PFYPRS-PYGVAKL 167 (335)
T ss_dssp CSCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTS----CCCCCS-HHHHHHH
T ss_pred ccccch-hhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCccc----CCCCCC-hhHHHHH
Confidence 997542 123457788999999999999999999986 899999999999987667899998 667766 7999999
Q ss_pred HHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCC
Q psy7590 146 MLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDL 225 (358)
Q Consensus 146 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
.+|.+++.+++.++++++++||+++|||..... +...++..++.....
T Consensus 168 ~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-----~~~~~~~~~~~~~~~--------------------------- 215 (335)
T 1rpn_A 168 YGHWITVNYRESFGLHASSGILFNHESPLRGIE-----FVTRKVTDAVARIKL--------------------------- 215 (335)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTT-----SHHHHHHHHHHHHHT---------------------------
T ss_pred HHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCC-----cchHHHHHHHHHHHc---------------------------
Confidence 999999999888899999999999999975432 222233334433333
Q ss_pred CcccCCccccCCCc-eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcc
Q psy7590 226 IPFSLFPFCFTGGD-EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR 304 (358)
Q Consensus 226 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~ 304 (358)
|. +...++++++.++|+|++|+|++++.+++++.. ++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus 216 ------------g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~---~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 280 (335)
T 1rpn_A 216 ------------GKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKA---DDYVVATGVTTTVRDMCQIAFEHVGLDYR 280 (335)
T ss_dssp ------------TSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSC---CCEEECCSCEEEHHHHHHHHHHTTTCCGG
T ss_pred ------------CCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCCC---CEEEEeCCCCccHHHHHHHHHHHhCCCcc
Confidence 44 334568888999999999999999999987542 48999999999999999999999998643
Q ss_pred --eeecC--CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 305 --ITFDT--NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 305 --i~~~~--~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+...+ .++.......+|++|++++| ||+|+ +++++|+++++|++++.+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~~~~~~~~~~ 333 (335)
T 1rpn_A 281 DFLKIDPAFFRPAEVDVLLGNPAKAQRVL--GWKPRTSLDELIRMMVEADLRRVS 333 (335)
T ss_dssp GTEEECGGGCCSSCCCBCCBCTHHHHHHH--CCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCcchhhcCCHHHHHHhc--CCCcCCCHHHHHHHHHHHHHHhhc
Confidence 22221 12223345678999999999 99976 999999999999998764
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-41 Score=316.78 Aligned_cols=290 Identities=19% Similarity=0.294 Sum_probs=236.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc---c---cc------CC--CC---------ceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE---E---KR------DD--ET---------WIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~---g---~~------~~--~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
|+|||||||||||++|+++|+++ | ++ .. .. ...+.++.+|++|++++.+++. ++|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d 78 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR--GVD 78 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc--CCC
Confidence 48999999999999999999996 6 53 11 00 0235567899999999999996 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
+|||+|+.... .....++...+++|+.++.+++++|.+.++++|||+||.++|+.....+++|++ +..|.+ .|+
T Consensus 79 ~Vih~A~~~~~-~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~----~~~~~~-~Y~ 152 (337)
T 1r6d_A 79 AIVHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESS----PLEPNS-PYA 152 (337)
T ss_dssp EEEECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTS----CCCCCS-HHH
T ss_pred EEEECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCC----CCCCCC-chH
Confidence 99999997541 122356778999999999999999999999999999999999976667888887 666666 799
Q ss_pred HHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCC
Q psy7590 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLD 221 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (358)
.+|..+|.+++.+++.+|++++++||+++|||..... .+++.++.. ..+
T Consensus 153 ~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~----~~~~~~~~~----~~~----------------------- 201 (337)
T 1r6d_A 153 ASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE----KLIPLFVTN----LLD----------------------- 201 (337)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT----SHHHHHHHH----HHT-----------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC----ChHHHHHHH----Hhc-----------------------
Confidence 9999999999999888899999999999999986431 234444433 334
Q ss_pred ccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCC
Q psy7590 222 KLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQF 301 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~ 301 (358)
+.++.+++++.+.++|+|++|+|++++.++++... +++||++++..+|+.|+++.+.+.+|.
T Consensus 202 ----------------~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~v~~~~~~s~~e~~~~i~~~~g~ 263 (337)
T 1r6d_A 202 ----------------GGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA--GEIYHIGGGLELTNRELTGILLDSLGA 263 (337)
T ss_dssp ----------------TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHTC
T ss_pred ----------------CCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCCC--CCEEEeCCCCCccHHHHHHHHHHHhCC
Confidence 77778888888999999999999999999987542 348999999999999999999999998
Q ss_pred Ccc-eeecCCCCCCccccccchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHhh
Q psy7590 302 KGR-ITFDTNAADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFRENH 353 (358)
Q Consensus 302 ~~~-i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~~ 353 (358)
+.+ +.+.+.++.......+|++|++++| ||+| ++++++|+++++|++++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~e~l~~~~~~~~~~~ 315 (337)
T 1r6d_A 264 DWSSVRKVADRKGHDLRYSLDGGKIEREL--GYRPQVSFADGLARTVRWYRENR 315 (337)
T ss_dssp CGGGEEEECCCTTCCCBCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHCH
T ss_pred CcccceecCCCCCCcceeecCHHHHHHHc--CCCCCCCHHHHHHHHHHHHHhch
Confidence 753 4444433333344568999999999 9997 499999999999998764
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-41 Score=324.47 Aligned_cols=315 Identities=17% Similarity=0.247 Sum_probs=241.0
Q ss_pred CEEEEEcCCChhHHHHHHHHH-Hcccc------CCCC------------c-------------ee---eecccccCCCHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVK-EEEKR------DDET------------W-------------IF---VSSKEADLSNLE 49 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~-~~g~~------~~~~------------~-------------~~---~~~~~~Dl~~~~ 49 (358)
|+|||||||||||++|+++|+ +.|++ .... . .. +.++.+|++|++
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 82 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence 589999999999999999999 98873 1111 0 02 566789999999
Q ss_pred HHHHHHhccC-CcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC-------CC
Q psy7590 50 STQQLFSKYK-PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT-------TY 121 (358)
Q Consensus 50 ~~~~~~~~~~-~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~-------~~ 121 (358)
++.++++..+ +|+|||+|+.... .....++...+++|+.++.+|+++|++.++++|||+||.++|+... ..
T Consensus 83 ~~~~~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~ 161 (397)
T 1gy8_A 83 FLNGVFTRHGPIDAVVHMCAFLAV-GESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (397)
T ss_dssp HHHHHHHHSCCCCEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHHHHHHhcCCCCEEEECCCccCc-CcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence 9999998655 9999999997642 1133567789999999999999999999999999999999998765 56
Q ss_pred CCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCC-----CCcccchhHHHHHHHHhh
Q psy7590 122 PIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYN-----LESSHVIPGLIRKLYDTI 196 (358)
Q Consensus 122 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~ 196 (358)
+++|++ +..|.+ .|+.+|+.+|.+++.++..+|++++++||++|||+..... .....+++.++..++...
T Consensus 162 ~~~E~~----~~~p~~-~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 236 (397)
T 1gy8_A 162 PIDINA----KKSPES-PYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI 236 (397)
T ss_dssp CBCTTS----CCBCSS-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred CcCccC----CCCCCC-chHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHH
Confidence 888988 666666 7999999999999999888899999999999999974311 012234444442222222
Q ss_pred hhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhc
Q psy7590 197 EKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREY 270 (358)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~ 270 (358)
..++... + + .......++.+++ ++.+.++|||++|+|++++.+++++
T Consensus 237 ~~~~~~~-~------~--------------------~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~ 289 (397)
T 1gy8_A 237 APDQRLT-I------H--------------------EDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYV 289 (397)
T ss_dssp SCC--------------------------------------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHH
T ss_pred HhcCccc-c------c--------------------cccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcc
Confidence 2200000 0 0 0000013566766 6778899999999999999999875
Q ss_pred CCCC----C---ceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc--cHHHH
Q psy7590 271 DSVE----P---IILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT--PFQQA 341 (358)
Q Consensus 271 ~~~~----~---~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~--~~~~~ 341 (358)
...+ . ++||+++++.+|+.|+++.+.+.+|.+.++...+..........+|++|+++.| ||+|+ +++++
T Consensus 290 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~l~e~ 367 (397)
T 1gy8_A 290 EKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVL--GWKPKYDTLEAI 367 (397)
T ss_dssp HTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHT--CCCCSCCSHHHH
T ss_pred cccccccccCCCcEEEeCCCCcccHHHHHHHHHHHhCCCCCeeeCCCCCCcccccccCHHHHHHHh--CCCCCcCCHHHH
Confidence 3322 2 599999999999999999999999988777666554444556789999999999 99976 99999
Q ss_pred HHHHHHHHHHhhc
Q psy7590 342 VQESVAWFRENHS 354 (358)
Q Consensus 342 l~~~~~~~~~~~~ 354 (358)
|+++++|++++.+
T Consensus 368 l~~~~~~~~~~~~ 380 (397)
T 1gy8_A 368 METSWKFQRTHPN 380 (397)
T ss_dssp HHHHHHHHHTCTT
T ss_pred HHHHHHHHHhccc
Confidence 9999999988754
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=320.35 Aligned_cols=300 Identities=16% Similarity=0.210 Sum_probs=236.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-CCc----------eeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-ETW----------IFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-~~~----------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
||+|||||||||||++|++.|++.|++ .. ... ..+.++.+|++|++++.+++++.++|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 468999999999999999999999874 11 110 1256678999999999999986569999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeeccceecCCCCCC----------------Ccccccc
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLSTCIFPDKTTYP----------------IDETMVH 129 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~~vy~~~~~~~----------------~~E~~~~ 129 (358)
|+.... .....++...+++|+.++.+|+++|.+.+++ +|||+||.++|+.....+ ++|+.
T Consensus 81 A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~-- 157 (347)
T 1orr_A 81 AGQVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDEST-- 157 (347)
T ss_dssp CCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTS--
T ss_pred CcccCh-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccC--
Confidence 997541 1223567789999999999999999999986 999999999998654433 44554
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhccc
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRA 209 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (358)
+..|.+ .|+.+|+.+|.+++.++...|++++++||++|||+...... ...+++.++..++.
T Consensus 158 --~~~~~~-~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~--------------- 218 (347)
T 1orr_A 158 --QLDFHS-PYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATY-DQGWVGWFCQKAVE--------------- 218 (347)
T ss_dssp --CCCCCH-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBT-TBCHHHHHHHHHHH---------------
T ss_pred --CCCCCC-chHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCC-cCcHHHHHHHHHHh---------------
Confidence 445555 79999999999999998888999999999999999764321 12344445444432
Q ss_pred CCCCCCCCCCCCccCCCcccCCccccCCCc-----eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCC
Q psy7590 210 RFPPGANSFGLDKLDLIPFSLFPFCFTGGD-----EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKD 284 (358)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~ 284 (358)
+. ++.+++++.+.++|+|++|+|++++.++++.....+++||++++.
T Consensus 219 ----------------------------~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~ 270 (347)
T 1orr_A 219 ----------------------------IKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTI 270 (347)
T ss_dssp ----------------------------HHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCG
T ss_pred ----------------------------CcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCC
Confidence 33 677788899999999999999999999985222233489999886
Q ss_pred --cccHHHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 285 --EVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 285 --~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
++|+.|+++.+.+.+|.+.++...+.+........+|++|++++| ||+|+ +++++|+++++|++++.+.
T Consensus 271 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~e~l~~~~~~~~~~~~~ 342 (347)
T 1orr_A 271 VNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAI--DWSPKVSAKDGVQKMYDWTSSILEH 342 (347)
T ss_dssp GGEEEHHHHHHHHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHC---
T ss_pred CCCccHHHHHHHHHHHhCCCCCceeCCCCCCCcceeecCHHHHHHHH--CCCccCCHHHHHHHHHHHHHHHHHh
Confidence 499999999999999988777766654444556778999999999 99985 9999999999999998764
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=327.06 Aligned_cols=298 Identities=20% Similarity=0.224 Sum_probs=230.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc------CCCC-------ceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR------DDET-------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~------~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
||+|||||||||||++|+++|+++| ++ .... ...+.++.+|++|++++.++++ ++|+|||+|+.
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~--~~d~Vih~A~~ 109 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQD--EYDYVFHLATY 109 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCS--CCSEEEECCCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhh--CCCEEEECCCc
Confidence 5799999999999999999999999 73 1111 2245677899999999999998 69999999997
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccceecCCCCCCCc--cccccCCCC-CCCCcchHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTCIFPDKTTYPID--ETMVHNGPP-HPSNFGYSHAKR 145 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~vy~~~~~~~~~--E~~~~~~~~-~p~~~~Y~~sK~ 145 (358)
... .....++...+++|+.++.+|+++|++. ++++|||+||.++|+.....+++ |+++.. +. .|.+ .|+.+|.
T Consensus 110 ~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~-~~~~~~~-~Y~~sK~ 186 (377)
T 2q1s_A 110 HGN-QSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIV-SLHNNDS-PYSMSKI 186 (377)
T ss_dssp SCH-HHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCC-CSSCCCS-HHHHHHH
T ss_pred cCc-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccc-cccCCCC-chHHHHH
Confidence 542 1223567889999999999999999999 89999999999999977656777 775210 22 4555 7999999
Q ss_pred HHHHHHHHHHhhcCceEEEEecCcccCCCC---------CCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 146 MLDVLNKAYYQQHGVTYTSVIPCNVFGPHD---------NYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 146 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
.+|.+++.+++..|++++++||++|||+.. .+......+++.++.. +.+
T Consensus 187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~------------------ 244 (377)
T 2q1s_A 187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYK----ALK------------------ 244 (377)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHH----HHT------------------
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHH----HHc------------------
Confidence 999999999888899999999999999976 2100002334444443 334
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHH-HHHHHHhcCCCCCceEEccCCCcccHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARL-FIWVLREYDSVEPIILSVDEKDEVTIAEVAEAI 295 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~-~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i 295 (358)
+.++.+++++++.++|+|++|+|++ ++.+++++. .+ +||+++++.+|+.|+++.+
T Consensus 245 ---------------------g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i 300 (377)
T 2q1s_A 245 ---------------------GMPLPLENGGVATRDFIFVEDVANGLIACAADGTP--GG-VYNIASGKETSIADLATKI 300 (377)
T ss_dssp ---------------------TCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCCCEEHHHHHHHH
T ss_pred ---------------------CCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCCceeHHHHHHHH
Confidence 7777777888889999999999999 999998754 34 8999999999999999999
Q ss_pred HHHhCCCcceeecCCCCCCcc-ccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 296 ANAFQFKGRITFDTNAADGQL-KKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 296 ~~~~g~~~~i~~~~~~~~~~~-~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.+.+|.+.++...+.++.... ...+|++|++++| ||+|. +++++|+++++|++++.+
T Consensus 301 ~~~~g~~~~~~~~p~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~~~~~~~~~~ 359 (377)
T 2q1s_A 301 NEITGNNTELDRLPKRPWDNSGKRFGSPEKARREL--GFSADVSIDDGLRKTIEWTKANLA 359 (377)
T ss_dssp HHHHTCCSCCCCCCCCGGGCC-CCCCCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHTHH
T ss_pred HHHhCCCCCceeCCCCccccccccccCHHHHHHHc--CCCCCCCHHHHHHHHHHHHHHhhh
Confidence 999998877666554444444 6789999999999 99975 999999999999987643
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=313.41 Aligned_cols=301 Identities=16% Similarity=0.223 Sum_probs=234.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC---CC---------ceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD---ET---------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~---~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|+|||||||||||++|+++|+++|++ .. .. ...+.++.+|++|++++.++++..++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 48999999999999999999999874 11 00 01245668999999999999986679999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRM 146 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~ 146 (358)
|+.... .....++...+++|+.++.++++++++.++++|||+||.++|+.....+++|++ +..|....|+.+|..
T Consensus 81 A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~----~~~~~~~~Y~~sK~~ 155 (338)
T 1udb_A 81 AGLKAV-GESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESF----PTGTPQSPYGKSKLM 155 (338)
T ss_dssp CSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTS----CCCCCSSHHHHHHHH
T ss_pred CccCcc-ccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCccc----CCCCCCChHHHHHHH
Confidence 997531 112345677899999999999999999999999999999999877667888887 544423389999999
Q ss_pred HHHHHHHHHhhc-CceEEEEecCcccCCCCCC----CCC--cccchhHHHHHHHHhhh-hcCccchhhcccCCCCCCCCC
Q psy7590 147 LDVLNKAYYQQH-GVTYTSVIPCNVFGPHDNY----NLE--SSHVIPGLIRKLYDTIE-KGKDQSVFESRARFPPGANSF 218 (358)
Q Consensus 147 ~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~~~----~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 218 (358)
+|.+++.++... +++++++||+++||+.... ... ...+++.++ .... .
T Consensus 156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~-------------------- 211 (338)
T 1udb_A 156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIA----QVAVGR-------------------- 211 (338)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHH----HHHHTS--------------------
T ss_pred HHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHH----HHHHhc--------------------
Confidence 999999988776 8999999999999985311 000 122333322 2222 1
Q ss_pred CCCccCCCcccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhcC-CCCCceEEccCCCcccHHHH
Q psy7590 219 GLDKLDLIPFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREYD-SVEPIILSVDEKDEVTIAEV 291 (358)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~v~n~~~~~~~s~~ei 291 (358)
+.++.+++ ++.+.++|||++|+|++++.++++.. ..+.++||++++..+|+.|+
T Consensus 212 -------------------~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~ 272 (338)
T 1udb_A 212 -------------------RDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDV 272 (338)
T ss_dssp -------------------SSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHH
T ss_pred -------------------CCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHH
Confidence 34555554 46678999999999999999998743 22225899999999999999
Q ss_pred HHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 292 AEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 292 ~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
++.+.+.+|.+.++...+.+........+|++|++++| ||+|+ +++++|+++++|++++.+-
T Consensus 273 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~~~l~~~~~w~~~~~~~ 335 (338)
T 1udb_A 273 VNAFSKACGKPVNYHFAPRREGDLPAYWADASKADREL--NWRVTRTLDEMAQDTWHWQSRHPQG 335 (338)
T ss_dssp HHHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHhCCCCcceeCCCCCCchhhhhcCHHHHHHHc--CCCcCCCHHHHHHHHHHHHHhcccc
Confidence 99999999988777666555444556778999999999 99976 9999999999999887653
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=310.19 Aligned_cols=276 Identities=20% Similarity=0.210 Sum_probs=228.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFF 84 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 84 (358)
|+|||||||||||++|++.|+++|+ ....+....+|++|++++.++++..++|+|||+|+.... .....++...+
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~~~ 80 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEY----DIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKV-DQAEKERDLAY 80 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTE----EEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCCCCCH-HHHTTCHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC----EEEEecccccCCCCHHHHHHHHHhcCCCEEEECCcccCh-HHHhcCHHHHH
Confidence 3899999999999999999999886 333333467999999999999997679999999998652 22346788899
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEE
Q psy7590 85 RVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTS 164 (358)
Q Consensus 85 ~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~i 164 (358)
++|+.++.+++++|++.++ +|||+||.++|+.....+++|++ +..|.+ .|+.+|..+|.+++.++. ++++
T Consensus 81 ~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E~~~~~~~~----~~~i 150 (287)
T 3sc6_A 81 VINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFH----NPAPIN-IYGASKYAGEQFVKELHN----KYFI 150 (287)
T ss_dssp HHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTS----CCCCCS-HHHHHHHHHHHHHHHHCS----SEEE
T ss_pred HHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCC----CCCCCC-HHHHHHHHHHHHHHHhCC----CcEE
Confidence 9999999999999999998 79999999999988778999998 777877 799999999999987643 6899
Q ss_pred EecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEc
Q psy7590 165 VIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244 (358)
Q Consensus 165 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 244 (358)
+||+++|||... . ++..++..... +.++.++
T Consensus 151 lR~~~v~G~~~~------~----~~~~~~~~~~~---------------------------------------~~~~~~~ 181 (287)
T 3sc6_A 151 VRTSWLYGKYGN------N----FVKTMIRLGKE---------------------------------------REEISVV 181 (287)
T ss_dssp EEECSEECSSSC------C----HHHHHHHHHTT---------------------------------------CSEEEEE
T ss_pred EeeeeecCCCCC------c----HHHHHHHHHHc---------------------------------------CCCeEee
Confidence 999999998653 2 34444444454 7788877
Q ss_pred CCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecC-----CCCCCccccc
Q psy7590 245 GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDT-----NAADGQLKKT 319 (358)
Q Consensus 245 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~-----~~~~~~~~~~ 319 (358)
++ +.++|+|++|+|++++.+++++. +++||+++++.+|+.|+++.+++.+|.+.++...+ ..........
T Consensus 182 ~~--~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 256 (287)
T 3sc6_A 182 AD--QIGSPTYVADLNVMINKLIHTSL---YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSI 256 (287)
T ss_dssp CS--CEECCEEHHHHHHHHHHHHTSCC---CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCC
T ss_pred cC--cccCceEHHHHHHHHHHHHhCCC---CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCccc
Confidence 54 78999999999999999999865 34999999999999999999999999887766543 2223344567
Q ss_pred cchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHh
Q psy7590 320 ASNRKLRELRGPGFEF-TPFQQAVQESVAWFREN 352 (358)
Q Consensus 320 ~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~ 352 (358)
+|++|++ .| ||+| ++++++|+++++|++++
T Consensus 257 ~d~~k~~-~l--g~~p~~~~~~~l~~~~~~~~~~ 287 (287)
T 3sc6_A 257 FQHNMLR-LN--GFLQMPSWEEGLERFFIETKSH 287 (287)
T ss_dssp BCCHHHH-HT--TCCCCCBHHHHHHHHHHHTC--
T ss_pred ccHHHHH-hh--CCCCCccHHHHHHHHHHHHhcC
Confidence 8999999 78 9996 59999999999998653
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=318.62 Aligned_cols=298 Identities=17% Similarity=0.207 Sum_probs=233.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
|++|+|||||||||||++|+++|+++|++ .... ...+.++.+|+++++++.++++..++|+|||
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence 34579999999999999999999999873 1111 1134567899999999999998666999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCC-CCCccccccCCCCCCCCcchHHH
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTT-YPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~-~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
+|+.... .....++...+++|+.++.+|+++|.+.+ +++|||+||.++|+.... .+++|++ +..|.+ .|+.+
T Consensus 87 ~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~----~~~~~~-~Y~~s 160 (357)
T 1rkx_A 87 MAAQPLV-RLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENE----AMGGYD-PYSNS 160 (357)
T ss_dssp CCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTS----CBCCSS-HHHHH
T ss_pred CCCCccc-ccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCC----CCCCCC-ccHHH
Confidence 9996421 12345677899999999999999999987 889999999999997643 4678877 555666 79999
Q ss_pred HHHHHHHHHHHHhhc---------CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCC
Q psy7590 144 KRMLDVLNKAYYQQH---------GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPG 214 (358)
Q Consensus 144 K~~~E~~~~~~~~~~---------g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (358)
|..+|.+++.++..+ |++++++||++||||..... ..+++.++.. +.+
T Consensus 161 K~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~---~~~~~~~~~~----~~~---------------- 217 (357)
T 1rkx_A 161 KGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL---DRIVPDILRA----FEQ---------------- 217 (357)
T ss_dssp HHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS---SCHHHHHHHH----HHT----------------
T ss_pred HHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc---ccHHHHHHHH----Hhc----------------
Confidence 999999999987754 99999999999999975421 2344444443 334
Q ss_pred CCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhc---CCCCCceEEccCC--CcccHH
Q psy7590 215 ANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREY---DSVEPIILSVDEK--DEVTIA 289 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~---~~~~~~v~n~~~~--~~~s~~ 289 (358)
|.++.+. ++...++|+|++|+|++++.++++. ....+++||++++ ..+|+.
T Consensus 218 -----------------------g~~~~~~-~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~ 273 (357)
T 1rkx_A 218 -----------------------SQPVIIR-NPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVK 273 (357)
T ss_dssp -----------------------TCCEECS-CTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHH
T ss_pred -----------------------CCCEEEC-CCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHH
Confidence 6666654 5677899999999999999998752 1122348999974 689999
Q ss_pred HHHHHHHHHhCCCcceeecCC-CCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 290 EVAEAIANAFQFKGRITFDTN-AADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 290 ei~~~i~~~~g~~~~i~~~~~-~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
|+++.+.+.+|.+.++...+. ++.......+|++|+++.| ||+|+ +++++|+++++|++++.+
T Consensus 274 e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~~~~~~~~~~ 338 (357)
T 1rkx_A 274 NIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQL--GWHPRWNLNTTLEYIVGWHKNWLS 338 (357)
T ss_dssp HHHHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHHHHHHh--CCCcCCcHHHHHHHHHHHHHHHhc
Confidence 999999999998777654432 2223445679999999999 99975 999999999999987754
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-40 Score=312.34 Aligned_cols=294 Identities=22% Similarity=0.344 Sum_probs=233.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-C---------ceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-T---------WIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
++||+|||||||||||++|+++|+++|++ ... . ...++++.+|+.++. +. ++|+|||
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-----~~--~~d~vih 97 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL-----YI--EVDQIYH 97 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC-----CC--CCSEEEE
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh-----hc--CCCEEEE
Confidence 45689999999999999999999999873 110 0 123456678887753 33 6999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccC-CCCCCCCcchHHHH
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN-GPPHPSNFGYSHAK 144 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK 144 (358)
+|+..... ....++...+++|+.++.+|+++|++.++ +|||+||.++|+.....+++|+.+.. .+..|.+ .|+.+|
T Consensus 98 ~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~-~Y~~sK 174 (343)
T 2b69_A 98 LASPASPP-NYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA-CYDEGK 174 (343)
T ss_dssp CCSCCSHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTH-HHHHHH
T ss_pred CccccCch-hhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCC-chHHHH
Confidence 99975421 12356778899999999999999999987 89999999999987667888875321 1444444 799999
Q ss_pred HHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccC
Q psy7590 145 RMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLD 224 (358)
Q Consensus 145 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
+.+|.+++.+++..+++++++||+++|||..... ...+++.++..+ .+
T Consensus 175 ~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~----~~-------------------------- 222 (343)
T 2b69_A 175 RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMN--DGRVVSNFILQA----LQ-------------------------- 222 (343)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTT--CCCHHHHHHHHH----HH--------------------------
T ss_pred HHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCC--cccHHHHHHHHH----Hc--------------------------
Confidence 9999999999888899999999999999976432 123444444443 33
Q ss_pred CCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcc
Q psy7590 225 LIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR 304 (358)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~ 304 (358)
++++.+++++.+.++|+|++|+|++++.+++++. +++||+++++.+|+.|+++.+.+.+|.+.+
T Consensus 223 -------------~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 286 (343)
T 2b69_A 223 -------------GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSE 286 (343)
T ss_dssp -------------TCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCCC
T ss_pred -------------CCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC---CCeEEecCCCCCcHHHHHHHHHHHhCCCCC
Confidence 7788888888899999999999999999987642 347999999999999999999999998887
Q ss_pred eeecCCCCCCccccccchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHhhcc
Q psy7590 305 ITFDTNAADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 305 i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~~~~ 355 (358)
+...+..........+|++|+++.| ||+| ++++++|+++++|++++.+.
T Consensus 287 ~~~~p~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~~~~~~~~~~~ 336 (343)
T 2b69_A 287 IQFLSEAQDDPQKRKPDIKKAKLML--GWEPVVPLEEGLNKAIHYFRKELEY 336 (343)
T ss_dssp EEEECCCTTCCCCCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred ceeCCCCCCCCceecCCHHHHHHHc--CCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7766554434456778999999999 9997 59999999999999887653
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-40 Score=309.02 Aligned_cols=292 Identities=14% Similarity=0.148 Sum_probs=228.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc--ccc------CCCC---ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE--EKR------DDET---WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~--g~~------~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|+|||||||||||++|+++|+++ |++ .... ...+.++.+|++|++++.++++..++|+|||+|+....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~- 81 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLSA- 81 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH-
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccCCC-
Confidence 58999999999999999999998 763 2211 12345678999999999999986679999999997542
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC-CCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT-TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~-~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
....++...+++|+.++.+|+++|++.++++|||+||.++|+... ..+.+|+. +..|.+ .|+.+|..+|.+++
T Consensus 82 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~----~~~~~~-~Y~~sK~~~e~~~~ 155 (312)
T 2yy7_A 82 -TAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYT----IMEPST-VYGISKQAGERWCE 155 (312)
T ss_dssp -HHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSC----BCCCCS-HHHHHHHHHHHHHH
T ss_pred -chhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccC----cCCCCc-hhHHHHHHHHHHHH
Confidence 123567789999999999999999999999999999999998754 35677777 566666 79999999999999
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
.+++.+|++++++||+++||+...+....... ++..+.....
T Consensus 156 ~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~---~~~~~~~~~~----------------------------------- 197 (312)
T 2yy7_A 156 YYHNIYGVDVRSIRYPGLISWSTPPGGGTTDY---AVDIFYKAIA----------------------------------- 197 (312)
T ss_dssp HHHHHHCCEEECEEECEEECSSSCCCSCTTTH---HHHHHHHHHH-----------------------------------
T ss_pred HHHHhcCCcEEEEeCCeEecCCCCCCCchhhh---HHHHHHHHHc-----------------------------------
Confidence 99888899999999999999865433211111 2222222222
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCC--CCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCC
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSV--EPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTN 310 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~ 310 (358)
+.++.+++++++.++|+|++|+|++++.+++++... .+++||+++ +.+|+.|+++.+.+.+| ..++.+.+.
T Consensus 198 -----~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~-~~~i~~~~~ 270 (312)
T 2yy7_A 198 -----DKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIP-EFTITYEPD 270 (312)
T ss_dssp -----TSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCT-TCEEEECCC
T ss_pred -----CCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCC-CCceEeccC
Confidence 445667788888999999999999999999876432 225899986 89999999999999998 344444332
Q ss_pred CCC---CccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHH
Q psy7590 311 AAD---GQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFR 350 (358)
Q Consensus 311 ~~~---~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~ 350 (358)
... ......+|++|++++| ||+|+ +++++|+++++|++
T Consensus 271 ~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 271 FRQKIADSWPASIDDSQAREDW--DWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp THHHHHTTSCSSBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHC
T ss_pred ccccccccccccCCHHHHHHHc--CCCCCCCHHHHHHHHHHHhC
Confidence 110 1123468999999999 99986 99999999999985
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=311.95 Aligned_cols=291 Identities=21% Similarity=0.314 Sum_probs=232.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc-ccc------CC--CC---------ceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE-EKR------DD--ET---------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~-g~~------~~--~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|||||||||||||++|++.|++. |++ .. .. ...+.++.+|++|++++.++++..++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 47999999999999999999998 653 11 00 11355678999999999999985579999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhc--CCC-------EEEEeeccceecCCCC--C--------CCcccc
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVK-------KVVSCLSTCIFPDKTT--Y--------PIDETM 127 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~-------r~V~~SS~~vy~~~~~--~--------~~~E~~ 127 (358)
|+.... .....++...+++|+.++.+++++|.+. +++ +|||+||.++|+.... . +++|++
T Consensus 81 A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 81 AAESHV-DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CSCCCH-HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCcCh-hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence 997541 1233567789999999999999999998 887 9999999999986532 1 778887
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhc
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (358)
+..|.+ .|+.+|..+|.+++.++...|++++++||++|||+..... .+++.++.. ...
T Consensus 160 ----~~~~~~-~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~----~~~~~~~~~----~~~--------- 217 (361)
T 1kew_A 160 ----AYAPSS-PYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE----KLIPLVILN----ALE--------- 217 (361)
T ss_dssp ----CCCCCS-HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT----SHHHHHHHH----HHH---------
T ss_pred ----CCCCCC-ccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc----cHHHHHHHH----HHc---------
Confidence 566666 7999999999999999888899999999999999986431 233444433 334
Q ss_pred ccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCccc
Q psy7590 208 RARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVT 287 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s 287 (358)
+.++.+++++.+.++|+|++|+|++++.++++... +++||++++..+|
T Consensus 218 ------------------------------~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~v~~~~~~s 265 (361)
T 1kew_A 218 ------------------------------GKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKA--GETYNIGGHNEKK 265 (361)
T ss_dssp ------------------------------TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT--TCEEEECCCCEEE
T ss_pred ------------------------------CCCceEcCCCceeEeeEEHHHHHHHHHHHHhCCCC--CCEEEecCCCeee
Confidence 77788888888999999999999999999987532 3489999999999
Q ss_pred HHHHHHHHHHHhCCCcc--------eeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHh
Q psy7590 288 IAEVAEAIANAFQFKGR--------ITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFREN 352 (358)
Q Consensus 288 ~~ei~~~i~~~~g~~~~--------i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~ 352 (358)
+.|+++.+.+.+|.+.+ +...+.++.......+|++|++++| ||+|+ +++++|+++++|++++
T Consensus 266 ~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 266 NLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISREL--GWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp HHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHH--CCCCSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCcCccccccccceeecCCCCcccceeecCHHHHHHHh--CCCCccCHHHHHHHHHHHHHhc
Confidence 99999999999986542 2222322323345678999999999 99975 9999999999999876
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=312.73 Aligned_cols=297 Identities=16% Similarity=0.098 Sum_probs=236.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------------CceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------------TWIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
|+|||||||||||++|+++|+++|++ ... ....+.++.+|++|++++.++++..++|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 58999999999999999999999873 211 1124567789999999999999876789
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC---CEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV---KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|||+|+.... .....++...+++|+.++.+|+++|.+.++ ++|||+||.++|+.....+++|++ +..|.+
T Consensus 105 ~vih~A~~~~~-~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~----~~~~~~- 178 (375)
T 1t2a_A 105 EIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETT----PFYPRS- 178 (375)
T ss_dssp EEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTS----CCCCCS-
T ss_pred EEEECCCcccc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccC----CCCCCC-
Confidence 99999997542 112356778999999999999999999987 799999999999977667899988 666666
Q ss_pred chHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSF 218 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (358)
.|+.+|+.+|.+++.++..++++++++||+++|||..... ++...+..++..+..
T Consensus 179 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~-----~~~~~~~~~~~~~~~-------------------- 233 (375)
T 1t2a_A 179 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGAN-----FVTRKISRSVAKIYL-------------------- 233 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTT-----SHHHHHHHHHHHHHH--------------------
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCC-----cchHHHHHHHHHHHc--------------------
Confidence 7999999999999999888899999999999999975421 222233333333333
Q ss_pred CCCccCCCcccCCccccCCCc-eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHH
Q psy7590 219 GLDKLDLIPFSLFPFCFTGGD-EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIAN 297 (358)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~ 297 (358)
|. +...++++++.++|+|++|+|++++.+++++.. ++||+++++.+|+.|+++.+.+
T Consensus 234 -------------------g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~~---~~~ni~~~~~~s~~e~~~~i~~ 291 (375)
T 1t2a_A 234 -------------------GQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEP---EDFVIATGEVHSVREFVEKSFL 291 (375)
T ss_dssp -------------------TSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSSC---CCEEECCSCCEEHHHHHHHHHH
T ss_pred -------------------CCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCCC---ceEEEeCCCcccHHHHHHHHHH
Confidence 43 334567888899999999999999999987542 4899999999999999999999
Q ss_pred HhCCCccee-------------------ecC--CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 298 AFQFKGRIT-------------------FDT--NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 298 ~~g~~~~i~-------------------~~~--~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
.+|.+.++. ..+ .++.......+|++|++++| ||+|+ +++++|+++++|+++..+.
T Consensus 292 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~~~~~~~~~~~ 369 (375)
T 1t2a_A 292 HIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKL--NWKPRVAFDELVREMVHADVELMRT 369 (375)
T ss_dssp HTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCcccccccccccccccccccceeecCcccCCcccchhhcCCHHHHHHhc--CCCccCCHHHHHHHHHHHHHHhhcc
Confidence 999875432 111 11222334567999999999 99976 9999999999999988764
Q ss_pred c
Q psy7590 356 A 356 (358)
Q Consensus 356 ~ 356 (358)
.
T Consensus 370 ~ 370 (375)
T 1t2a_A 370 N 370 (375)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=309.14 Aligned_cols=280 Identities=16% Similarity=0.171 Sum_probs=219.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-----eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-----IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
+|+|||||||||||++|+++|+++|++ ..... ..++++.+|++|++++.++++ ++|+|||+|+...
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vih~a~~~~- 89 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALR--GLDGVIFSAGYYP- 89 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTT--TCSEEEEC------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHc--CCCEEEECCccCc-
Confidence 469999999999999999999999873 22211 145677899999999999998 5999999999754
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCC--CCCccccccCCCCCC----CCcchHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT--YPIDETMVHNGPPHP----SNFGYSHAKRM 146 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~--~~~~E~~~~~~~~~p----~~~~Y~~sK~~ 146 (358)
....++...+++|+.++.+++++|.++++++|||+||.++|+.... .+ +|++ +..| .+ .|+.+|..
T Consensus 90 --~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~-~E~~----~~~p~~~~~~-~Y~~sK~~ 161 (342)
T 2x4g_A 90 --SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPG-HEGL----FYDSLPSGKS-SYVLCKWA 161 (342)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCB-CTTC----CCSSCCTTSC-HHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCC-CCCC----CCCccccccC-hHHHHHHH
Confidence 2345677899999999999999999999999999999999987643 34 8887 5566 55 79999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCC-CCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCC
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHD-NYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDL 225 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
+|.+++.+++. |++++++||+++||+.. .+ . ++.++..+. .
T Consensus 162 ~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~-----~-~~~~~~~~~----~--------------------------- 203 (342)
T 2x4g_A 162 LDEQAREQARN-GLPVVIGIPGMVLGELDIGP-----T-TGRVITAIG----N--------------------------- 203 (342)
T ss_dssp HHHHHHHHHHT-TCCEEEEEECEEECSCCSSC-----S-TTHHHHHHH----T---------------------------
T ss_pred HHHHHHHHhhc-CCcEEEEeCCceECCCCccc-----c-HHHHHHHHH----c---------------------------
Confidence 99999998877 99999999999999976 21 1 344544433 2
Q ss_pred CcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcce
Q psy7590 226 IPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI 305 (358)
Q Consensus 226 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i 305 (358)
|..+.+ ++..++|+|++|+|++++.+++++.. +++||++++. +|+.|+++.+.+.+|.+.++
T Consensus 204 ------------~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~--g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~ 265 (342)
T 2x4g_A 204 ------------GEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI--GERYLLTGHN-LEMADLTRRIAELLGQPAPQ 265 (342)
T ss_dssp ------------TCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT--TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE
T ss_pred ------------CCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC--CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC
Confidence 555444 55678999999999999999998654 3489999988 99999999999999987665
Q ss_pred eecCCCC-----------------------C----CccccccchHHHHhhhCCCC-ccccHHHHHHHHHHHHHHhh
Q psy7590 306 TFDTNAA-----------------------D----GQLKKTASNRKLRELRGPGF-EFTPFQQAVQESVAWFRENH 353 (358)
Q Consensus 306 ~~~~~~~-----------------------~----~~~~~~~~~~k~~~~l~~G~-~~~~~~~~l~~~~~~~~~~~ 353 (358)
..+... . ......+|++|++++| || +|++++++|+++++|++++.
T Consensus 266 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~~p~~~~~~l~~~~~~~~~~g 338 (342)
T 2x4g_A 266 -PMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREEL--GFFSTTALDDTLLRAIDWFRDNG 338 (342)
T ss_dssp -EECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHTT
T ss_pred -cCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhC--CCCCCCCHHHHHHHHHHHHHHcC
Confidence 332210 0 0235678999999999 99 99999999999999998764
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-40 Score=310.54 Aligned_cols=301 Identities=20% Similarity=0.262 Sum_probs=232.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc-ccc------CCCC------ceeeecccccCCCH-HHHHHHHhccCCcEEEEccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE-EKR------DDET------WIFVSSKEADLSNL-ESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~-g~~------~~~~------~~~~~~~~~Dl~~~-~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
|+|||||||||||++|+++|+++ |++ .... ...+.++.+|++|+ +.+.++++ ++|+|||+|+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~d~vih~A~~~ 78 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVAIA 78 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH--HCSEEEECBCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc--CCCEEEEccccc
Confidence 48999999999999999999998 763 1111 12456678999984 56888887 599999999975
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccC--CCC-CCCCcchHHHHHHH
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN--GPP-HPSNFGYSHAKRML 147 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~--~~~-~p~~~~Y~~sK~~~ 147 (358)
.+. ....++...+++|+.++.+++++|++.+ ++|||+||.++|+.....+++|+++.. .+. .|.+ .|+.+|..+
T Consensus 79 ~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~-~Y~~sK~~~ 155 (345)
T 2bll_A 79 TPI-EYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRW-IYSVSKQLL 155 (345)
T ss_dssp CHH-HHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGG-HHHHHHHHH
T ss_pred Ccc-chhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCccc-ccHHHHHHH
Confidence 421 1234677889999999999999999999 899999999999987667788887421 111 2333 799999999
Q ss_pred HHHHHHHHhhcCceEEEEecCcccCCCCCCCC----CcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCcc
Q psy7590 148 DVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNL----ESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223 (358)
Q Consensus 148 E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
|.+++.+++..|++++++||+++||+...... ....+++.++. ....
T Consensus 156 e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~~------------------------- 206 (345)
T 2bll_A 156 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLIL----NLVE------------------------- 206 (345)
T ss_dssp HHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHH----HHHH-------------------------
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHH----HHHc-------------------------
Confidence 99999998888999999999999999864311 11223344443 3344
Q ss_pred CCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCC-cccHHHHHHHHHHHhCC
Q psy7590 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKD-EVTIAEVAEAIANAFQF 301 (358)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~-~~s~~ei~~~i~~~~g~ 301 (358)
|.++.+++++.+.++|+|++|+|++++.+++++.. ..+++||+++++ .+|+.|+++.+.+.+|.
T Consensus 207 --------------~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~ 272 (345)
T 2bll_A 207 --------------GSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEK 272 (345)
T ss_dssp --------------TCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHT
T ss_pred --------------CCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCC
Confidence 77888888888999999999999999999987532 234599999986 89999999999999987
Q ss_pred CcceeecCCC---------------CCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 302 KGRITFDTNA---------------ADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 302 ~~~i~~~~~~---------------~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
+......+.. ........+|++|++++| ||+|. +++++|+++++|++++.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~~~l~~~~~~~~~~~~~ 340 (345)
T 2bll_A 273 HPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCL--DWEPKIDMQETIDETLDFFLRTVDL 340 (345)
T ss_dssp CTTGGGSCCCCCEEEC------------CCCCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred CcccccCccccccccccchhhccccccchhhhcccHHHHHHhc--CCCccccHHHHHHHHHHHHHHcCCC
Confidence 6432211111 012234678999999999 99975 9999999999999987654
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=314.30 Aligned_cols=302 Identities=15% Similarity=0.112 Sum_probs=232.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------------------------ceeeecccccCCCHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------------------------WIFVSSKEADLSNLE 49 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------------------------~~~~~~~~~Dl~~~~ 49 (358)
|++|||||||||||++|+++|+++|++ .... ...+.++.+|++|++
T Consensus 11 ~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~ 90 (404)
T 1i24_A 11 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 90 (404)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHH
Confidence 679999999999999999999999974 0000 123556789999999
Q ss_pred HHHHHHhccCCcEEEEcccccCCccccccchh---hHHHHHHHHHHHHHHHHHhcCC-CEEEEeeccceecCCCCCCCcc
Q psy7590 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNL---DFFRVNMKINDNVLDTSYKQGV-KKVVSCLSTCIFPDKTTYPIDE 125 (358)
Q Consensus 50 ~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~---~~~~~nv~~~~~ll~aa~~~~v-~r~V~~SS~~vy~~~~~~~~~E 125 (358)
++.+++++.++|+|||+|+..... ....++. ..+++|+.++.+++++|.+.++ ++|||+||.++|+... .+++|
T Consensus 91 ~~~~~~~~~~~D~Vih~A~~~~~~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~E 168 (404)
T 1i24_A 91 FLAESFKSFEPDSVVHFGEQRSAP-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEE 168 (404)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHH-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCS
T ss_pred HHHHHHhccCCCEEEECCCCCCcc-chhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCCc
Confidence 999999866699999999975421 1122332 4789999999999999999987 5999999999998764 46677
Q ss_pred cccc----------CCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCC-----------C--cc
Q psy7590 126 TMVH----------NGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNL-----------E--SS 182 (358)
Q Consensus 126 ~~~~----------~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~-----------~--~~ 182 (358)
+.+. ..+..|.+ .|+.+|+.+|.+++.+++.+|++++++||++||||...+.. . ..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~ 247 (404)
T 1i24_A 169 GYITITHNGRTDTLPYPKQASS-FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 247 (404)
T ss_dssp SEEEEEETTEEEEEECCCCCCS-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred cccccccccccccccCCCCCCC-hhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchh
Confidence 5210 01445555 79999999999999998888999999999999999764210 0 01
Q ss_pred cchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHH
Q psy7590 183 HVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARL 262 (358)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~ 262 (358)
.+++.++..+ .. |+++.+++++.+.++|+|++|+|++
T Consensus 248 ~~~~~~~~~~----~~---------------------------------------g~~~~~~g~g~~~~~~i~v~Dva~a 284 (404)
T 1i24_A 248 TALNRFCVQA----AV---------------------------------------GHPLTVYGKGGQTRGYLDIRDTVQC 284 (404)
T ss_dssp CHHHHHHHHH----HH---------------------------------------TCCEEEETTSCCEEEEEEHHHHHHH
T ss_pred hHHHHHHHHH----Hc---------------------------------------CCeeEEeCCCCceECcEEHHHHHHH
Confidence 3344444443 44 7788888889999999999999999
Q ss_pred HHHHHHhcCCCC-CceEEccCCCcccHHHHHHHHHHH---hCCCcceeecCCCCC--CccccccchHHHHhhhCCCCccc
Q psy7590 263 FIWVLREYDSVE-PIILSVDEKDEVTIAEVAEAIANA---FQFKGRITFDTNAAD--GQLKKTASNRKLRELRGPGFEFT 336 (358)
Q Consensus 263 ~~~~~~~~~~~~-~~v~n~~~~~~~s~~ei~~~i~~~---~g~~~~i~~~~~~~~--~~~~~~~~~~k~~~~l~~G~~~~ 336 (358)
++.+++++...+ .++||+++ ..+|+.|+++.+.+. +|.+.++...+.... ......+|++|++ +| ||+|+
T Consensus 285 ~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~L--G~~p~ 360 (404)
T 1i24_A 285 VEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-EL--GLEPH 360 (404)
T ss_dssp HHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHH-HT--TCCCC
T ss_pred HHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHhhCCCccccccCcccCccccceEecCHHHHH-Hc--CCCcC
Confidence 999998754322 15899998 899999999999998 787776655544322 2234567999998 58 99976
Q ss_pred -cHHHHHHHHHHHHHHhhcc
Q psy7590 337 -PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 337 -~~~~~l~~~~~~~~~~~~~ 355 (358)
+++++++++++|++...+.
T Consensus 361 ~~~~~~l~~~~~~~~~~~~~ 380 (404)
T 1i24_A 361 YLSDSLLDSLLNFAVQFKDR 380 (404)
T ss_dssp CCCHHHHHHHHHHHHHTGGG
T ss_pred cCHHHHHHHHHHHHHhhhhc
Confidence 8999999999999877653
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=311.05 Aligned_cols=297 Identities=18% Similarity=0.155 Sum_probs=236.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------------ceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------------WIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
||+|||||||||||++|+++|+++|++ .... ...+.++.+|++|++++.++++..++|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 468999999999999999999999873 1110 124567789999999999999876789
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC---CEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV---KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|||+|+.... .....++...+++|+.++.+++++|.+.++ ++|||+||.++|+.....+++|++ +..|.+
T Consensus 81 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~----~~~~~~- 154 (372)
T 1db3_A 81 EVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETT----PFYPRS- 154 (372)
T ss_dssp EEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTS----CCCCCS-
T ss_pred EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccC----CCCCCC-
Confidence 99999997542 233456778899999999999999999988 799999999999977667889988 666666
Q ss_pred chHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSF 218 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (358)
.|+.+|..+|.+++.++..++++++++|++++|||..... ++..++..++.....
T Consensus 155 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~-----~~~~~~~~~~~~~~~-------------------- 209 (372)
T 1db3_A 155 PYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGET-----FVTRKITRAIANIAQ-------------------- 209 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTT-----SHHHHHHHHHHHHHT--------------------
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCc-----chhhHHHHHHHHHHc--------------------
Confidence 7999999999999999888899999999999999975431 222334444443343
Q ss_pred CCCccCCCcccCCccccCCCc-eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHH
Q psy7590 219 GLDKLDLIPFSLFPFCFTGGD-EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIAN 297 (358)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~ 297 (358)
|. +...++++.+.++|+|++|+|++++.+++++. + ++||+++++.+|+.|+++.+.+
T Consensus 210 -------------------g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~--~-~~~ni~~~~~~s~~e~~~~i~~ 267 (372)
T 1db3_A 210 -------------------GLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ--P-EDFVIATGVQYSVRQFVEMAAA 267 (372)
T ss_dssp -------------------TSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS--C-CCEEECCCCCEEHHHHHHHHHH
T ss_pred -------------------CCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC--C-ceEEEcCCCceeHHHHHHHHHH
Confidence 44 34456788889999999999999999987643 2 4899999999999999999999
Q ss_pred HhCCCcceee-----------------------------cC--CCCCCccccccchHHHHhhhCCCCcc-ccHHHHHHHH
Q psy7590 298 AFQFKGRITF-----------------------------DT--NAADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQES 345 (358)
Q Consensus 298 ~~g~~~~i~~-----------------------------~~--~~~~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~ 345 (358)
.+|.+.++.. .+ .++.......+|++|++++| ||+| ++++++|+++
T Consensus 268 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~ 345 (372)
T 1db3_A 268 QLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKL--GWKPEITLREMVSEM 345 (372)
T ss_dssp TTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHH--CCCCCSCHHHHHHHH
T ss_pred HhCCCcccccccccccccccccccccccccccccceeeccccccCCCchhhhccCHHHHHHHh--CCccccCHHHHHHHH
Confidence 9997654221 01 11122234567999999999 9997 5999999999
Q ss_pred HHHHHHhhcc
Q psy7590 346 VAWFRENHSV 355 (358)
Q Consensus 346 ~~~~~~~~~~ 355 (358)
++|++++.+.
T Consensus 346 ~~~~~~~~~~ 355 (372)
T 1db3_A 346 VANDLEAAKK 355 (372)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHhhhc
Confidence 9999988764
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-40 Score=307.66 Aligned_cols=284 Identities=14% Similarity=0.082 Sum_probs=225.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFF 84 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 84 (358)
|+|||||||||||++|+++|+ +|++-..-......+.+|++|++++.+++++.++|+|||+|+.... .....++...+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~~ 78 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV-DKAESEPELAQ 78 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH-HHHTTCHHHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccccccccCCCHHHHHHHHHhcCCCEEEECcccCCH-hhhhcCHHHHH
Confidence 489999999999999999999 7873000000002457999999999999986679999999997542 12346778899
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEE
Q psy7590 85 RVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTS 164 (358)
Q Consensus 85 ~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~i 164 (358)
++|+.++.+++++|++.++ +|||+||.++|+.....+++|++ +..|.+ .|+.+|..+|.+++.++ .++++
T Consensus 79 ~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E~~~~~~~----~~~~i 148 (299)
T 1n2s_A 79 LLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETD----ATSPLN-VYGKTKLAGEKALQDNC----PKHLI 148 (299)
T ss_dssp HHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTS----CCCCSS-HHHHHHHHHHHHHHHHC----SSEEE
T ss_pred HHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCC----CCCCcc-HHHHHHHHHHHHHHHhC----CCeEE
Confidence 9999999999999999988 89999999999987777899998 777777 79999999999998764 37999
Q ss_pred EecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEc
Q psy7590 165 VIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244 (358)
Q Consensus 165 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 244 (358)
+||+++||+... . ++..++....+ +.++.+.
T Consensus 149 lRp~~v~G~~~~------~----~~~~~~~~~~~---------------------------------------~~~~~~~ 179 (299)
T 1n2s_A 149 FRTSWVYAGKGN------N----FAKTMLRLAKE---------------------------------------RQTLSVI 179 (299)
T ss_dssp EEECSEECSSSC------C----HHHHHHHHHHH---------------------------------------CSEEEEE
T ss_pred EeeeeecCCCcC------c----HHHHHHHHHhc---------------------------------------CCCEEee
Confidence 999999999753 2 23334444444 7777776
Q ss_pred CCCCceeeeeeHHHHHHHHHHHHHhcC--CCCCceEEccCCCcccHHHHHHHHHHHhCCC------cceeecCC-----C
Q psy7590 245 GTGKPLRQFIYSLDLARLFIWVLREYD--SVEPIILSVDEKDEVTIAEVAEAIANAFQFK------GRITFDTN-----A 311 (358)
Q Consensus 245 ~~~~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~------~~i~~~~~-----~ 311 (358)
++ +.++|+|++|+|++++.+++++. ...+++||+++++.+|+.|+++.+.+.+|.+ ..+...+. .
T Consensus 180 ~~--~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 257 (299)
T 1n2s_A 180 ND--QYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTP 257 (299)
T ss_dssp CS--CEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCS
T ss_pred cC--cccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCc
Confidence 54 78999999999999999998762 2023589999999999999999999999876 23333221 1
Q ss_pred CCCccccccchHHHHhhhCCCCccccHHHHHHHHHHHHHHhh
Q psy7590 312 ADGQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFRENH 353 (358)
Q Consensus 312 ~~~~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~~~ 353 (358)
........+|++|++++| ||+|++++++|+++++|++++.
T Consensus 258 ~~~~~~~~~d~~k~~~~l--G~~p~~~~~~l~~~~~~~~~~~ 297 (299)
T 1n2s_A 258 ASRPGNSRLNTEKFQRNF--DLILPQWELGVKRMLTEMFTTT 297 (299)
T ss_dssp SCCCSBCCBCCHHHHHHH--TCCCCBHHHHHHHHHHHHHSCC
T ss_pred CCCCCceeeeHHHHHHhc--CCCCCCHHHHHHHHHHHHHhcC
Confidence 112345678999999999 9999899999999999998754
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=311.46 Aligned_cols=289 Identities=17% Similarity=0.252 Sum_probs=229.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc------CCCC-----ceeeecccccCCCHHHHHHHHhcc---CCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR------DDET-----WIFVSSKEADLSNLESTQQLFSKY---KPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~---~~d~Vih~a~ 68 (358)
.|+|||||||||||++|+++|+++| ++ .... ...+. +.+|+++++.+.++++.. ++|+|||+|+
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~ 124 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 124 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEECCc
Confidence 3689999999999999999999998 53 1111 11122 578999999999888742 5999999999
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHH
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLD 148 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E 148 (358)
.... ...++...+++|+.++.+|+++|.+.++ +|||+||.++|+.....+++|++ +..|.+ .|+.+|..+|
T Consensus 125 ~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E 195 (357)
T 2x6t_A 125 CSST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESRE----YEKPLN-VFGYSKFLFD 195 (357)
T ss_dssp CCCT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGG----GCCCSS-HHHHHHHHHH
T ss_pred ccCC---ccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcC----CCCCCC-hhHHHHHHHH
Confidence 7652 3456788999999999999999999999 99999999999987667899998 667766 7999999999
Q ss_pred HHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcc
Q psy7590 149 VLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPF 228 (358)
Q Consensus 149 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (358)
.+++.++...|++++++||++||||...+......+++.+ +..+.+
T Consensus 196 ~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~----~~~~~~------------------------------ 241 (357)
T 2x6t_A 196 EYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHL----NTQLNN------------------------------ 241 (357)
T ss_dssp HHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHH----HHHHHT------------------------------
T ss_pred HHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHH----HHHHHc------------------------------
Confidence 9999998888999999999999999865322112333333 333344
Q ss_pred cCCccccCCCceEEEcCCCCc-eeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceee
Q psy7590 229 SLFPFCFTGGDEFKVLGTGKP-LRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITF 307 (358)
Q Consensus 229 ~~~~~~~~~g~~~~~~~~~~~-~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~ 307 (358)
+.++.+++++.+ .++|+|++|+|++++.+++++. +++||+++++.+|+.|+++.+.+.+|.+ ++..
T Consensus 242 ---------~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~ 308 (357)
T 2x6t_A 242 ---------GESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKG-QIEY 308 (357)
T ss_dssp ---------TCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEE
T ss_pred ---------CCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEecCCCcccHHHHHHHHHHHcCCC-Ccee
Confidence 777777888888 8999999999999999999865 4599999999999999999999999987 4443
Q ss_pred cCCCC----CCccccccchHHHHhhhCCCC-cc-ccHHHHHHHHHHHHHHh
Q psy7590 308 DTNAA----DGQLKKTASNRKLRELRGPGF-EF-TPFQQAVQESVAWFREN 352 (358)
Q Consensus 308 ~~~~~----~~~~~~~~~~~k~~~~l~~G~-~~-~~~~~~l~~~~~~~~~~ 352 (358)
.+.+. ........|++|+++ | || .| ++++++|+++++|++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~k~~~-l--G~~~~~~~l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 309 IPFPDKLKGRYQAFTQADLTNLRA-A--GYDKPFKTVAEGVTEYMAWLNRD 356 (357)
T ss_dssp ECCCGGGTTSCCSBCCCCCHHHHH-T--TCCCCCCCHHHHHHHHHHHHC--
T ss_pred cCCCcccccccccccccCHHHHHH-c--CCCCCCCCHHHHHHHHHHHHhhc
Confidence 33322 112345678999987 7 99 54 59999999999999764
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=304.60 Aligned_cols=298 Identities=17% Similarity=0.110 Sum_probs=234.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-----------eeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-----------IFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-----------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
++|+|||||||||||++|+++|+++|++ ..... ..+.++.+|++|++++.++++..++|+|||
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 4579999999999999999999999974 21111 135667899999999999998767899999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC-CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHH
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV-KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
+|+.... .....++...+++|+.++.+++++|.+.++ ++|||+||.++||.....+++|+. +..|.+ .|+.+|
T Consensus 82 ~A~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~----~~~~~~-~Y~~sK 155 (345)
T 2z1m_A 82 LAAQSFV-GVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKT----PFYPRS-PYAVAK 155 (345)
T ss_dssp CCCCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTS----CCCCCS-HHHHHH
T ss_pred CCCCcch-hhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccC----CCCCCC-hhHHHH
Confidence 9997541 123467788999999999999999999887 899999999999987777888887 666666 799999
Q ss_pred HHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccC
Q psy7590 145 RMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLD 224 (358)
Q Consensus 145 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (358)
..+|.+++.++..++++++++|++++|||+.... .+...+..++.....
T Consensus 156 ~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~-----~~~~~~~~~~~~~~~-------------------------- 204 (345)
T 2z1m_A 156 LFGHWITVNYREAYNMFACSGILFNHESPLRGIE-----FVTRKITYSLARIKY-------------------------- 204 (345)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTT-----SHHHHHHHHHHHHHT--------------------------
T ss_pred HHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCc-----chhHHHHHHHHHHHc--------------------------
Confidence 9999999999888899999999999999975422 111222222322223
Q ss_pred CCcccCCccccCCCc-eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCc
Q psy7590 225 LIPFSLFPFCFTGGD-EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKG 303 (358)
Q Consensus 225 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~ 303 (358)
+. ...+.+++...++|+|++|+|++++.+++++.. ++||+++++.+|+.|+++.+.+.+|.+.
T Consensus 205 -------------~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~---~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 268 (345)
T 2z1m_A 205 -------------GLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPEP---DDYVIATGETHTVREFVEKAAKIAGFDI 268 (345)
T ss_dssp -------------TSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSSC---CCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred -------------CCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCCC---ceEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence 33 233467778889999999999999999987542 4799999999999999999999999875
Q ss_pred cee-------------------ecC--CCCCCccccccchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHhhcc
Q psy7590 304 RIT-------------------FDT--NAADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 304 ~i~-------------------~~~--~~~~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~~~~ 355 (358)
++. ..+ .++.......+|++|++++| ||+| ++++++|+++++|++++.+.
T Consensus 269 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~~~~~l~~~~~~~~~~~~~ 340 (345)
T 2z1m_A 269 EWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKL--GWKPRTTFDELVEIMMEADLKRVRD 340 (345)
T ss_dssp EEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHHHHC
T ss_pred cccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHc--CCcccCCHHHHHHHHHHHHHHHhcc
Confidence 432 111 11222334567999999999 9997 49999999999999987653
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=299.42 Aligned_cols=276 Identities=21% Similarity=0.248 Sum_probs=224.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDF 83 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~ 83 (358)
.|+|||||||||||++|+++|+++|++ ...+....+|++|++++.++++..++|+|||+|+.... .....++...
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~----V~~~~r~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~-~~~~~~~~~~ 86 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVE----VIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAV-DKCEEQYDLA 86 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEE----EEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCH-HHHHHCHHHH
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCe----EEeccCccCCCCCHHHHHHHHHhcCCCEEEECCccCCH-HHHhcCHHHH
Confidence 368999999999999999999998862 22222236899999999999986569999999997542 1223567889
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEE
Q psy7590 84 FRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYT 163 (358)
Q Consensus 84 ~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ 163 (358)
+++|+.++.+++++|.+.++ +|||+||.++|+.....+++|++ +..|.+ .|+.+|..+|.+++.++ .+++
T Consensus 87 ~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~----~~~~~~-~Y~~sK~~~E~~~~~~~----~~~~ 156 (292)
T 1vl0_A 87 YKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFD----EVNPQS-AYGKTKLEGENFVKALN----PKYY 156 (292)
T ss_dssp HHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTS----CCCCCS-HHHHHHHHHHHHHHHHC----SSEE
T ss_pred HHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCC----CCCCcc-HHHHHHHHHHHHHHhhC----CCeE
Confidence 99999999999999999998 99999999999987667899998 667766 79999999999998763 4689
Q ss_pred EEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEE
Q psy7590 164 SVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKV 243 (358)
Q Consensus 164 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (358)
++||+++||+ .. . ++..++..... +.++.+
T Consensus 157 ~lR~~~v~G~-~~------~----~~~~~~~~~~~---------------------------------------~~~~~~ 186 (292)
T 1vl0_A 157 IVRTAWLYGD-GN------N----FVKTMINLGKT---------------------------------------HDELKV 186 (292)
T ss_dssp EEEECSEESS-SS------C----HHHHHHHHHHH---------------------------------------CSEEEE
T ss_pred EEeeeeeeCC-Cc------C----hHHHHHHHHhc---------------------------------------CCcEEe
Confidence 9999999999 32 2 23333333344 667766
Q ss_pred cCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCC-----CCCcccc
Q psy7590 244 LGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNA-----ADGQLKK 318 (358)
Q Consensus 244 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~-----~~~~~~~ 318 (358)
.+ ++.++|+|++|+|++++.+++++ .+++||+++++.+|+.|+++.+.+.+|.+.++...+.. .......
T Consensus 187 ~~--~~~~~~i~v~Dva~~~~~~~~~~---~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 261 (292)
T 1vl0_A 187 VH--DQVGTPTSTVDLARVVLKVIDEK---NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYS 261 (292)
T ss_dssp ES--SCEECCEEHHHHHHHHHHHHHHT---CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBC
T ss_pred ec--CeeeCCccHHHHHHHHHHHHhcC---CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccc
Confidence 65 46789999999999999999885 34589999999999999999999999988665543321 1223456
Q ss_pred ccchHHHHhhhCCCCccccHHHHHHHHHHHHHH
Q psy7590 319 TASNRKLRELRGPGFEFTPFQQAVQESVAWFRE 351 (358)
Q Consensus 319 ~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~ 351 (358)
.+|++|++++| ||+|++++++|+++++||++
T Consensus 262 ~~d~~k~~~~l--G~~p~~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 262 VLRNYMLELTT--GDITREWKESLKEYIDLLQM 292 (292)
T ss_dssp CBCCHHHHHTT--CCCCCBHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHc--CCCCCCHHHHHHHHHHHhcC
Confidence 78999999999 99988999999999999863
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=308.10 Aligned_cols=272 Identities=15% Similarity=0.158 Sum_probs=216.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------C-CCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------D-DETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLF 74 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~ 74 (358)
|+||+||||| +||||++|++.|+++|++ . ......++++.+|++|++++.++++. ++|+|||+|+...
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~vih~a~~~~--- 75 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHL-RPEILVYCVAASE--- 75 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCCTTCCEEECCTTCGGGCTTGGGG-CCSEEEECHHHHH---
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccccCCceEEccCCChHHHHHhhcC-CCCEEEEeCCCCC---
Confidence 4467999999 599999999999999984 1 11123456679999999999999884 5999999999743
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHH
Q psy7590 75 HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154 (358)
Q Consensus 75 ~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 154 (358)
.++...+++|+.++.+|+++|++.++++|||+||.++|+.....+++|++ +..|.+ .|+.+|..+|.+ +.+
T Consensus 76 ---~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E~~-~~~ 146 (286)
T 3gpi_A 76 ---YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDT----PPIAKD-FSGKRMLEAEAL-LAA 146 (286)
T ss_dssp ---HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTS----CCCCCS-HHHHHHHHHHHH-GGG
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCC----CCCCCC-hhhHHHHHHHHH-Hhc
Confidence 45677889999999999999999999999999999999988778899998 777777 799999999999 553
Q ss_pred HhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccc
Q psy7590 155 YQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFC 234 (358)
Q Consensus 155 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (358)
++++++||+++||+... .++..+.. .
T Consensus 147 -----~~~~ilR~~~v~G~~~~----------~~~~~~~~--~------------------------------------- 172 (286)
T 3gpi_A 147 -----YSSTILRFSGIYGPGRL----------RMIRQAQT--P------------------------------------- 172 (286)
T ss_dssp -----SSEEEEEECEEEBTTBC----------HHHHHTTC--G-------------------------------------
T ss_pred -----CCeEEEecccccCCCch----------hHHHHHHh--c-------------------------------------
Confidence 89999999999999754 23443321 0
Q ss_pred cCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcC-CCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCCC
Q psy7590 235 FTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYD-SVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAAD 313 (358)
Q Consensus 235 ~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~ 313 (358)
...+++...++|+|++|+|++++.+++++. ...+++||+++++.+|+.|+++.+.+.+|.+.++...+ .
T Consensus 173 -------~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~---~ 242 (286)
T 3gpi_A 173 -------EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP---P 242 (286)
T ss_dssp -------GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC---C
T ss_pred -------ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc---c
Confidence 012566778899999999999999999852 22335899999999999999999999999887665443 3
Q ss_pred CccccccchHHHHhhhCCCCccc--cHHHHHHHHHHHHHHhhc
Q psy7590 314 GQLKKTASNRKLRELRGPGFEFT--PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 314 ~~~~~~~~~~k~~~~l~~G~~~~--~~~~~l~~~~~~~~~~~~ 354 (358)
......+|++|++ .| ||+|+ +|+++|+++++|+..+.+
T Consensus 243 ~~~~~~~d~~k~~-~l--G~~p~~~~l~e~l~~~~~~~~~~~~ 282 (286)
T 3gpi_A 243 VQGNKKLSNARLL-AS--GYQLIYPDYVSGYGALLAAMREGHH 282 (286)
T ss_dssp BCSSCEECCHHHH-HT--TCCCSSCSHHHHHHHHHHHHTC---
T ss_pred cCCCeEeeHHHHH-Hc--CCCCcCCcHHHHHHHHHHHHhcccc
Confidence 4456778999998 78 99976 699999999999887665
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=306.91 Aligned_cols=287 Identities=18% Similarity=0.255 Sum_probs=209.3
Q ss_pred EEEEEcCCChhHHHHHHHHHHcc-cc------CCCC-----ceeeecccccCCCHHHHHHHHhcc---CCcEEEEccccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEE-KR------DDET-----WIFVSSKEADLSNLESTQQLFSKY---KPTHVIHLAAMV 70 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g-~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~---~~d~Vih~a~~~ 70 (358)
+|||||||||||++|+++|+++| ++ .... ...+. +.+|+++++.+.++++.. ++|+|||+|+..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~ 79 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 79 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcce-eccccccHHHHHHHHhccccCCCcEEEECcccc
Confidence 59999999999999999999998 53 1111 11122 578999999999988741 499999999976
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHH
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 150 (358)
.. ...++...+++|+.++.+++++|.+.++ +|||+||.++|+.....+++|++ +..|.+ .|+.+|..+|.+
T Consensus 80 ~~---~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~----~~~p~~-~Y~~sK~~~e~~ 150 (310)
T 1eq2_A 80 ST---TEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESRE----YEKPLN-VYGYSKFLFDEY 150 (310)
T ss_dssp CT---TCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGG----GCCCSS-HHHHHHHHHHHH
T ss_pred cC---cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCC----CCCCCC-hhHHHHHHHHHH
Confidence 52 3467788999999999999999999999 99999999999987666889988 667766 799999999999
Q ss_pred HHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccC
Q psy7590 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSL 230 (358)
Q Consensus 151 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (358)
++.+++..|++++++||+++|||...+......+++.+ +..+.+
T Consensus 151 ~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~----~~~~~~-------------------------------- 194 (310)
T 1eq2_A 151 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHL----NTQLNN-------------------------------- 194 (310)
T ss_dssp HHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHH----HHHHHC--------------------------------
T ss_pred HHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHH----HHHHHc--------------------------------
Confidence 99998888999999999999999764321112333333 444444
Q ss_pred CccccCCCceEEEcCCCCc-eeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecC
Q psy7590 231 FPFCFTGGDEFKVLGTGKP-LRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDT 309 (358)
Q Consensus 231 ~~~~~~~g~~~~~~~~~~~-~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~ 309 (358)
+.++.+++++.+ .++|+|++|+|++++.+++++. +++||+++++.+|+.|+++.+.+.+|.+ ++...+
T Consensus 195 -------~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~ 263 (310)
T 1eq2_A 195 -------GESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIP 263 (310)
T ss_dssp --------------------CBCEEEHHHHHHHHHHHHHHCC---CEEEEESCSCCBCHHHHHHHC--------------
T ss_pred -------CCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC---CCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCC
Confidence 777777788888 8999999999999999999865 4599999999999999999999999976 333332
Q ss_pred CCC----CCccccccchHHHHhhhCCCC-cc-ccHHHHHHHHHHHHHHh
Q psy7590 310 NAA----DGQLKKTASNRKLRELRGPGF-EF-TPFQQAVQESVAWFREN 352 (358)
Q Consensus 310 ~~~----~~~~~~~~~~~k~~~~l~~G~-~~-~~~~~~l~~~~~~~~~~ 352 (358)
.+. ........|++|+++ | || .| ++++++|+++++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~-l--G~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 264 FPDKLKGRYQAFTQADLTNLRA-A--GYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp --------CCCSCCBCCHHHHH-T--TCCCCCCCHHHHHHHHHHHTC--
T ss_pred CChhhhcccccccccchHHHHh-c--CCCCCCCCHHHHHHHHHHHHHhc
Confidence 221 112345678999987 7 99 54 59999999999998764
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=298.91 Aligned_cols=295 Identities=16% Similarity=0.233 Sum_probs=227.4
Q ss_pred EEEEEcCCChhHHHHHHHHHHc--ccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEE--EKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNM 77 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~--g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 77 (358)
+|||||||||||++|+++|+++ |++ .......+.++.+|++|++++.++++..++|+|||+|+.... ...
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~--~~~ 78 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA--KGE 78 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH--HHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC--ccc
Confidence 5999999999999999999998 663 211111345678999999999999986679999999997532 123
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC-CCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy7590 78 SHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT-TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156 (358)
Q Consensus 78 ~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~-~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~ 156 (358)
.++...+++|+.++.+|+++|++.++++|||+||.++|+... ..+.+|++ +..|.+ .|+.+|..+|.+++.+++
T Consensus 79 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~----~~~p~~-~Y~~sK~~~e~~~~~~~~ 153 (317)
T 3ajr_A 79 KDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSIT----ITRPRT-MFGVTKIAAELLGQYYYE 153 (317)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSS----CCCCCS-HHHHHHHHHHHHHHHHHH
T ss_pred cChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccc----cCCCCc-hHHHHHHHHHHHHHHHHH
Confidence 567789999999999999999999999999999999998653 34677776 666766 799999999999999988
Q ss_pred hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccC
Q psy7590 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFT 236 (358)
Q Consensus 157 ~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (358)
.+|++++++||+++||+...+....... ++..+.....
T Consensus 154 ~~~~~~~~lR~~~~~g~~~~~~~~~~~~---~~~~~~~~~~--------------------------------------- 191 (317)
T 3ajr_A 154 KFGLDVRSLRYPGIISYKAEPTAGTTDY---AVEIFYYAVK--------------------------------------- 191 (317)
T ss_dssp HHCCEEEEEEECEEECSSSCCCSCSSTH---HHHHHHHHHT---------------------------------------
T ss_pred hcCCeEEEEecCcEeccCCCCCCcchhH---HHHHHHHHHh---------------------------------------
Confidence 8899999999999999865432111111 2222222222
Q ss_pred CCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCC--CCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCC--
Q psy7590 237 GGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSV--EPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAA-- 312 (358)
Q Consensus 237 ~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~--~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~-- 312 (358)
+.++.+++++...++|+|++|+|++++.+++++... .+++||+++ ..+|+.|+++.+.+.+| ...+.+.+...
T Consensus 192 -~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~-~~~i~~~~~~~~~ 268 (317)
T 3ajr_A 192 -REKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIP-EFEIEYKEDFRDK 268 (317)
T ss_dssp -TCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCC-SCCEEECCCHHHH
T ss_pred -CCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCC-ccccccccccchh
Confidence 345556677788899999999999999999875431 235899986 68999999999999998 33444433210
Q ss_pred -CCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 313 -DGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 313 -~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.......+|++|++++| ||+|+ +++++|+++++|++++..
T Consensus 269 ~~~~~~~~~d~~k~~~~l--G~~p~~~~~~~l~~~~~~~~~~~~ 310 (317)
T 3ajr_A 269 IAATWPESLDSSEASNEW--GFSIEYDLDRTIDDMIDHISEKLG 310 (317)
T ss_dssp HHTTSCSCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHTT
T ss_pred hccccccccCHHHHHHHc--CCCCCCCHHHHHHHHHHHHHhhhc
Confidence 01123467999999999 99976 999999999999988764
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=306.55 Aligned_cols=294 Identities=19% Similarity=0.168 Sum_probs=233.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------c--------e-eeecccccCCCHHHHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------W--------I-FVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~--------~-~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
|+|||||||||||++|++.|+++|++ .... . . .+.++.+|++|++++.++++..++|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 58999999999999999999999873 1111 1 1 4667789999999999999876789
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-----EEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-----KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-----r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
+|||+|+.... .....++...+++|+.++.+|+++|.+.+++ +|||+||.++|+.... +++|++ +..|.
T Consensus 109 ~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~----~~~~~ 182 (381)
T 1n7h_A 109 EVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETT----PFHPR 182 (381)
T ss_dssp EEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTS----CCCCC
T ss_pred EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCC----CCCCC
Confidence 99999997542 1223567789999999999999999998776 9999999999997765 889988 66676
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
+ .|+.+|..+|.+++.++..++++++++|++++|||..... ++..++..++..+..
T Consensus 183 ~-~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~-----~~~~~~~~~~~~~~~------------------ 238 (381)
T 1n7h_A 183 S-PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGEN-----FVTRKITRALGRIKV------------------ 238 (381)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTT-----SHHHHHHHHHHHHHH------------------
T ss_pred C-chHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCc-----chhHHHHHHHHHHHc------------------
Confidence 6 7999999999999999888899999999999999975431 222233333333333
Q ss_pred CCCCCccCCCcccCCccccCCCc-eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGD-EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAI 295 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i 295 (358)
|. ....++++.+.++|+|++|+|++++.+++++.. ++||++++..+|+.|+++.+
T Consensus 239 ---------------------g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~---~~~~i~~~~~~s~~e~~~~i 294 (381)
T 1n7h_A 239 ---------------------GLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKP---DDYVVATEEGHTVEEFLDVS 294 (381)
T ss_dssp ---------------------TSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSSC---CEEEECCSCEEEHHHHHHHH
T ss_pred ---------------------CCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCCC---CeEEeeCCCCCcHHHHHHHH
Confidence 43 334467788899999999999999999987542 48999999999999999999
Q ss_pred HHHhCCCcc--eeecC--CCCCCccccccchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHhhc
Q psy7590 296 ANAFQFKGR--ITFDT--NAADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFRENHS 354 (358)
Q Consensus 296 ~~~~g~~~~--i~~~~--~~~~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~~~ 354 (358)
.+.+|.+.. +...+ .++.......+|++|++++| ||+| ++++++|+++++||+++.+
T Consensus 295 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~~l~e~l~~~~~~~~~~~~ 356 (381)
T 1n7h_A 295 FGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVL--GWKPQVGFEKLVKMMVDEDLELAK 356 (381)
T ss_dssp HHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCcccccccCcccCCccccccccCCHHHHHHhc--CCcccCCHHHHHHHHHHHHHhhcc
Confidence 999997642 22221 12223344667999999999 9997 5999999999999988764
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=295.80 Aligned_cols=293 Identities=18% Similarity=0.172 Sum_probs=227.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcc-------cc------CCC-----CceeeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEE-------KR------DDE-----TWIFVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g-------~~------~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
+++|+||||||+||||++|+++|+++| ++ ... ....+.++.+|++|++++.++++. ++|+|
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~v 90 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEA-RPDVI 90 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHT-CCSEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhc-CCCEE
Confidence 456799999999999999999999998 53 111 123456778999999999999853 69999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-----CCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-----VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-----v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
||+|+.... ....++...+++|+.++.+|+++|.+.+ +++|||+||.++|+.....+++|++ +..|.+
T Consensus 91 ih~A~~~~~--~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~----~~~~~~- 163 (342)
T 2hrz_A 91 FHLAAIVSG--EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEF----HTTPLT- 163 (342)
T ss_dssp EECCCCCHH--HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTC----CCCCSS-
T ss_pred EECCccCcc--cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCC----CCCCcc-
Confidence 999997541 2235677889999999999999999886 8899999999999976567899998 666766
Q ss_pred chHHHHHHHHHHHHHHHhhcCceEEEEecCcccC-CCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFG-PHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANS 217 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (358)
.|+.+|..+|.+++.++...+++.+++|++++|| |.... ..... ++..++....+
T Consensus 164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~-~~~~~----~~~~~~~~~~~------------------- 219 (342)
T 2hrz_A 164 SYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPN-AAASG----FFSNILREPLV------------------- 219 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCC-CSGGG----HHHHHHHHHHT-------------------
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCc-chhHH----HHHHHHHHHhc-------------------
Confidence 7999999999999999888789999999999999 54321 11122 33333333344
Q ss_pred CCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC--CCCceEEccCCCcccHHHHHHHH
Q psy7590 218 FGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS--VEPIILSVDEKDEVTIAEVAEAI 295 (358)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~v~n~~~~~~~s~~ei~~~i 295 (358)
+.++.++..+...++++|++|+|++++.+++++.. ...++||++ +..+|+.|+++.+
T Consensus 220 --------------------~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i 278 (342)
T 2hrz_A 220 --------------------GQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEAL 278 (342)
T ss_dssp --------------------TCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHH
T ss_pred --------------------CCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHH
Confidence 66666666666778899999999999999987532 223489996 5789999999999
Q ss_pred HHHhCCCc--ceeecCCCCC----CccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHH
Q psy7590 296 ANAFQFKG--RITFDTNAAD----GQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFR 350 (358)
Q Consensus 296 ~~~~g~~~--~i~~~~~~~~----~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~ 350 (358)
.+.+|.+. .+...+.... ......+|++|+++ | ||+|. +++++|+++++|++
T Consensus 279 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-l--G~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 279 RKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKRARE-L--GFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp HHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHHHHH-T--TCCCCSSHHHHHHHHHHHHS
T ss_pred HHHcCcccccceeeccCcchhhhhcccccccChHHHHH-c--CCCCCCCHHHHHHHHHHHhc
Confidence 99999765 2433332110 11123579999999 8 99975 99999999999997
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=291.97 Aligned_cols=276 Identities=21% Similarity=0.283 Sum_probs=215.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----c---eeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----W---IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
+||+|||||||||||++|+++|+++|++ .... . ..+.++.+|++|++++.+++++.++|+|||+|+.
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 99 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS 99 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence 3679999999999999999999999873 1111 1 2456678999999999999985569999999997
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceec----CCCCCCCccccccCCCCCCC-CcchHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP----DKTTYPIDETMVHNGPPHPS-NFGYSHAK 144 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~----~~~~~~~~E~~~~~~~~~p~-~~~Y~~sK 144 (358)
.... ...++. +++|+.++.+++++|.+.++++|||+||.++|+ .... +++|++ .|. + .|+.+|
T Consensus 100 ~~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~------~p~~~-~Y~~sK 167 (333)
T 2q1w_A 100 YKDP--DDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR------NPANS-SYAISK 167 (333)
T ss_dssp CSCT--TCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC------CCTTC-HHHHHH
T ss_pred cCCC--ccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC------CCCCC-chHHHH
Confidence 6521 222333 899999999999999999999999999999998 5433 777774 344 4 799999
Q ss_pred HHHHHHHHH-HHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCcc
Q psy7590 145 RMLDVLNKA-YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223 (358)
Q Consensus 145 ~~~E~~~~~-~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
..+|.+++. ++ +++++||+++|||... ..+++.++..+ ..
T Consensus 168 ~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~-----~~~~~~~~~~~----~~------------------------- 208 (333)
T 2q1w_A 168 SANEDYLEYSGL-----DFVTFRLANVVGPRNV-----SGPLPIFFQRL----SE------------------------- 208 (333)
T ss_dssp HHHHHHHHHHTC-----CEEEEEESEEESTTCC-----SSHHHHHHHHH----HT-------------------------
T ss_pred HHHHHHHHhhhC-----CeEEEeeceEECcCCc-----CcHHHHHHHHH----Hc-------------------------
Confidence 999999987 54 7899999999999832 23444444433 22
Q ss_pred CCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCc
Q psy7590 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKG 303 (358)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~ 303 (358)
+. .+++ +.+.++|+|++|+|++++.++.++. +++||++++..+|+.|+++.+.+.+|.+
T Consensus 209 --------------~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~- 267 (333)
T 2q1w_A 209 --------------GK--KCFV-TKARRDFVFVKDLARATVRAVDGVG---HGAYHFSSGTDVAIKELYDAVVEAMALP- 267 (333)
T ss_dssp --------------TC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC---CEEEECSCSCCEEHHHHHHHHHHHTTCS-
T ss_pred --------------CC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC---CCEEEeCCCCCccHHHHHHHHHHHhCCC-
Confidence 43 2344 5667899999999999999998754 4589999999999999999999999987
Q ss_pred ceeecCCCC----CCccccccchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHhh
Q psy7590 304 RITFDTNAA----DGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFRENH 353 (358)
Q Consensus 304 ~i~~~~~~~----~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~~ 353 (358)
++.+.+.+. .......+|++|++++ ||+| ++++++|+++++|++++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~d~~k~~~~---G~~p~~~~~~~l~~~~~~~~~~~ 319 (333)
T 2q1w_A 268 SYPEPEIRELGPDDAPSILLDPSRTIQDF---GKIEFTPLKETVAAAVAYFREYG 319 (333)
T ss_dssp SCCCCEEEECCTTSCCCCCBCCHHHHHHH---CCCCCCCHHHHHHHHHHHHHHHC
T ss_pred CceeCCCCCcccccccccccCCHHHHHhc---CCCcCCCHHHHHHHHHHHHHHHC
Confidence 444332211 1124567899999986 9997 599999999999998764
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=293.78 Aligned_cols=277 Identities=20% Similarity=0.246 Sum_probs=216.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------CceeeecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
.|+|||||||||||++|+++|+++|++ ... ....+.++.+|++|++++.++++..++|+|||+|+..
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~ 99 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAY 99 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 469999999999999999999999873 111 1124566789999999999999855699999999976
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCC--CCccccccCCCCCCCCcchHHHHHHHH
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTY--PIDETMVHNGPPHPSNFGYSHAKRMLD 148 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~--~~~E~~~~~~~~~p~~~~Y~~sK~~~E 148 (358)
... ...++. +++|+.++.+++++|.+.++++|||+||.++|+..... +++|++ .|.+ .|+.+|..+|
T Consensus 100 ~~~--~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~------~~~~-~Y~~sK~~~e 168 (330)
T 2pzm_A 100 KDP--DDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT------APFT-SYGISKTAGE 168 (330)
T ss_dssp SCT--TCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC------CCCS-HHHHHHHHHH
T ss_pred CCc--cccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC------CCCC-hHHHHHHHHH
Confidence 421 222333 89999999999999999999999999999999865433 777764 3444 7999999999
Q ss_pred HHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcc
Q psy7590 149 VLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPF 228 (358)
Q Consensus 149 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (358)
.+++.+ +++++++||+++|||+.. ..+++.++.. ...
T Consensus 169 ~~~~~~----~~~~~~iR~~~v~gp~~~-----~~~~~~~~~~----~~~------------------------------ 205 (330)
T 2pzm_A 169 AFLMMS----DVPVVSLRLANVTGPRLA-----IGPIPTFYKR----LKA------------------------------ 205 (330)
T ss_dssp HHHHTC----SSCEEEEEECEEECTTCC-----SSHHHHHHHH----HHT------------------------------
T ss_pred HHHHHc----CCCEEEEeeeeeECcCCC-----CCHHHHHHHH----HHc------------------------------
Confidence 998765 789999999999999852 1233333332 233
Q ss_pred cCCccccCCCceEEEcCCCCceeeeeeHHHHHH-HHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceee
Q psy7590 229 SLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLAR-LFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITF 307 (358)
Q Consensus 229 ~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~-~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~ 307 (358)
+. .+++++. .++|+|++|+|+ +++.+++++. +++||++++..+|+.|+++.+.+.+|.+ ++..
T Consensus 206 ---------~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~ 269 (330)
T 2pzm_A 206 ---------GQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP---TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEP 269 (330)
T ss_dssp ---------TC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC---CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSC
T ss_pred ---------CC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC---CCEEEeCCCCCCCHHHHHHHHHHHhCCC-Ccee
Confidence 43 3344555 789999999999 9999998743 4599999999999999999999999987 5544
Q ss_pred cCCCCCCccccccchHHH-----HhhhCCCCcc-ccHHHHHHHHHHHHHHhhc
Q psy7590 308 DTNAADGQLKKTASNRKL-----RELRGPGFEF-TPFQQAVQESVAWFRENHS 354 (358)
Q Consensus 308 ~~~~~~~~~~~~~~~~k~-----~~~l~~G~~~-~~~~~~l~~~~~~~~~~~~ 354 (358)
.+... ......+|++|+ ++ | ||+| ++++++|+++++|++++..
T Consensus 270 ~~~~~-~~~~~~~d~~k~~~~~l~~-l--G~~p~~~~~~~l~~~~~~~~~~~~ 318 (330)
T 2pzm_A 270 VPVVA-PGADDVPSVVLDPSKTETE-F--GWKAKVDFKDTITGQLAWYDKYGV 318 (330)
T ss_dssp CCEEC-CCTTSCSEECBCCHHHHHH-H--CCCCCCCHHHHHHHHHHHHHHHCS
T ss_pred CCCCc-chhhccCCHHHHhhchHHH-c--CCcccCCHHHHHHHHHHHHHhhCc
Confidence 44322 334566777777 78 8 9997 5999999999999987653
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=319.14 Aligned_cols=301 Identities=22% Similarity=0.289 Sum_probs=228.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
+|+|||||||||||++|+++|+++|++ .... ...+.++.+|+++++++.++++..++|+|||
T Consensus 11 ~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~Vih 90 (699)
T 1z45_A 11 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIH 90 (699)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEEEE
Confidence 468999999999999999999999873 1111 1235567899999999999998667999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC----CCCCccccccCCCCCCCCcchH
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT----TYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~----~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
+|+.... ......+...+++|+.++.+|+++|++.++++|||+||.++|+... ..+++|++ +..|.+ .|+
T Consensus 91 ~A~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~----~~~p~~-~Y~ 164 (699)
T 1z45_A 91 FAGLKAV-GESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC----PLGPTN-PYG 164 (699)
T ss_dssp CCSCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTS----CCCCCS-HHH
T ss_pred CCcccCc-CccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccC----CCCCCC-hHH
Confidence 9997542 1123456678999999999999999999999999999999998642 25677877 666666 799
Q ss_pred HHHHHHHHHHHHHHhh--cCceEEEEecCcccCCCCCCC--CC----cccchhHHHHHHHHhhhhcCccchhhcccCCCC
Q psy7590 142 HAKRMLDVLNKAYYQQ--HGVTYTSVIPCNVFGPHDNYN--LE----SSHVIPGLIRKLYDTIEKGKDQSVFESRARFPP 213 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~--~g~~~~ilRp~~v~G~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (358)
.+|..+|.+++.+++. .+++++++||+++||+..... .. ...+++. +......
T Consensus 165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~----~~~~~~~--------------- 225 (699)
T 1z45_A 165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPY----MAQVAVG--------------- 225 (699)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHH----HHHHHTT---------------
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHH----HHHHHhc---------------
Confidence 9999999999998776 689999999999999863210 00 1122332 2221111
Q ss_pred CCCCCCCCccCCCcccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhcC-----CCCCceEEccC
Q psy7590 214 GANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREYD-----SVEPIILSVDE 282 (358)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~~-----~~~~~v~n~~~ 282 (358)
.+.++.+++ ++.+.++|||++|+|++++.++++.. ....++||+++
T Consensus 226 -----------------------~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~ 282 (699)
T 1z45_A 226 -----------------------RREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGS 282 (699)
T ss_dssp -----------------------SSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESC
T ss_pred -----------------------CCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECC
Confidence 023454554 57788999999999999999997531 22235899999
Q ss_pred CCcccHHHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHhhc
Q psy7590 283 KDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFRENHS 354 (358)
Q Consensus 283 ~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~~~ 354 (358)
++.+|+.|+++.+++.+|.+.++...+.+........+|++|++++| ||+| ++++++|+++++|++++..
T Consensus 283 ~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~ka~~~L--G~~p~~~l~egl~~~~~w~~~~~~ 353 (699)
T 1z45_A 283 GKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKREL--KWQTELQVEDSCKDLWKWTTENPF 353 (699)
T ss_dssp SCCEEHHHHHHHHHHHHTCCCCC---------CCCCCBCCHHHHHHT--CCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred CCCCcHHHHHHHHHHHhCCCCCceecCCCCCccccccCCHHHHHHhc--CCCCCCCHHHHHHHHHHHHHhCCc
Confidence 99999999999999999988766554444444556788999999999 9997 5999999999999987754
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=317.81 Aligned_cols=305 Identities=20% Similarity=0.270 Sum_probs=233.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc-ccc------CCCC------ceeeecccccCCCHHH-HHHHHhccCCcEEEEc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE-EKR------DDET------WIFVSSKEADLSNLES-TQQLFSKYKPTHVIHL 66 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~-g~~------~~~~------~~~~~~~~~Dl~~~~~-~~~~~~~~~~d~Vih~ 66 (358)
|+++|+|||||||||||++|+++|+++ |++ .... ...+.++.+|++++++ +.++++ ++|+|||+
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~--~~D~Vih~ 389 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK--KCDVVLPL 389 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHH--HCSEEEEC
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhc--CCCEEEEC
Confidence 446789999999999999999999998 663 2111 1245667899999765 777887 59999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccC--CCC-CCCCcchHHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN--GPP-HPSNFGYSHA 143 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~--~~~-~p~~~~Y~~s 143 (358)
|+..... ....++...+++|+.++.+++++|.+++ ++|||+||.++|+.....+++|+++.. .+. .|.+ .|+.+
T Consensus 390 Aa~~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~-~Y~~s 466 (660)
T 1z7e_A 390 VAIATPI-EYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRW-IYSVS 466 (660)
T ss_dssp CCCCCTH-HHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTH-HHHHH
T ss_pred ceecCcc-ccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCC-CcHHH
Confidence 9976421 1235677899999999999999999999 899999999999987667788887311 111 3333 79999
Q ss_pred HHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCC----CCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 144 KRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYN----LESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 144 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
|+.+|.+++.+++..|++++++||+++||+..... .....+++.++..+ .+
T Consensus 467 K~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~----~~--------------------- 521 (660)
T 1z7e_A 467 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNL----VE--------------------- 521 (660)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHH----HH---------------------
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHH----Hc---------------------
Confidence 99999999999888899999999999999976420 00123344444433 34
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCC-cccHHHHHHHHHH
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKD-EVTIAEVAEAIAN 297 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~-~~s~~ei~~~i~~ 297 (358)
|.++.+++++.+.++|+|++|+|++++.++++... ..+++||+++++ .+|+.|+++.+.+
T Consensus 522 ------------------g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~ 583 (660)
T 1z7e_A 522 ------------------GSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLA 583 (660)
T ss_dssp ------------------TCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHH
T ss_pred ------------------CCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHH
Confidence 77888888888899999999999999999987542 234699999986 8999999999999
Q ss_pred HhCCCcceeecCC---------------CCCCccccccchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHhhcc
Q psy7590 298 AFQFKGRITFDTN---------------AADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 298 ~~g~~~~i~~~~~---------------~~~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~~~~ 355 (358)
.+|.+......+. .........+|++|++++| ||+| ++++++|+++++|++++...
T Consensus 584 ~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ka~~~L--G~~p~~~l~egl~~~i~~~~~~~~~ 655 (660)
T 1z7e_A 584 SFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCL--DWEPKIDMQETIDETLDFFLRTVDL 655 (660)
T ss_dssp HHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHTTSCC
T ss_pred HhcCCCcccccCccccccchhccccccccccchhhcccCHHHHHHhc--CCCccCcHHHHHHHHHHHHHhhccc
Confidence 9986532111111 0112334678999999999 9997 59999999999999887653
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-37 Score=286.16 Aligned_cols=282 Identities=19% Similarity=0.201 Sum_probs=197.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 78 (358)
|+|||||||||||++|+++|+++|++ .... .. ++.+|++|++++.++++..++|+|||+|+.... .....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~-~~~~~ 78 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP-DVVEN 78 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------CHHHHHHHCCSEEEECC-----------
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh-hhhhc
Confidence 58999999999999999999999873 1111 11 567999999999999986669999999997542 12345
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH 158 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~ 158 (358)
++...+++|+.++.+++++|.+.++ +|||+||.++|+. ...+++|++ +..|.+ .|+.+|..+|.+++.+
T Consensus 79 ~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~----~~~~~~-~Y~~sK~~~e~~~~~~---- 147 (315)
T 2ydy_A 79 QPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREED----IPAPLN-LYGKTKLDGEKAVLEN---- 147 (315)
T ss_dssp ---------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTS----CCCCCS-HHHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCC----CCCCcC-HHHHHHHHHHHHHHHh----
Confidence 6778999999999999999999987 8999999999987 467889988 666666 7999999999999875
Q ss_pred CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhh-hcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCC
Q psy7590 159 GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIE-KGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTG 237 (358)
Q Consensus 159 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (358)
+++++++||++|||+...+. ..+++.++..+ . .
T Consensus 148 ~~~~~~lR~~~v~G~~~~~~---~~~~~~~~~~~----~~~--------------------------------------- 181 (315)
T 2ydy_A 148 NLGAAVLRIPILYGEVEKLE---ESAVTVMFDKV----QFS--------------------------------------- 181 (315)
T ss_dssp CTTCEEEEECSEECSCSSGG---GSTTGGGHHHH----HCC---------------------------------------
T ss_pred CCCeEEEeeeeeeCCCCccc---ccHHHHHHHHH----Hhc---------------------------------------
Confidence 56789999999999976521 12333333322 2 2
Q ss_pred CceEEEcCCCCceeeeeeHHHHHHHHHHHHHhc--CCCCCceEEccCCCcccHHHHHHHHHHHhCCCcc-eeecCC----
Q psy7590 238 GDEFKVLGTGKPLRQFIYSLDLARLFIWVLREY--DSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR-ITFDTN---- 310 (358)
Q Consensus 238 g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~-i~~~~~---- 310 (358)
+.++.+. +.+.++|+|++|+|++++.++.+. ....+++||+++++.+|+.|+++.+.+.+|.+.+ +...+.
T Consensus 182 ~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~ 259 (315)
T 2ydy_A 182 NKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVL 259 (315)
T ss_dssp SSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCS
T ss_pred CCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheecccccccc
Confidence 5565554 356789999999999999999864 1223459999999999999999999999998764 332221
Q ss_pred CCCCccccccchHHHHhhhCCCCcc-ccHHHHHHHHHHHHHHh
Q psy7590 311 AADGQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVAWFREN 352 (358)
Q Consensus 311 ~~~~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~~~~~~ 352 (358)
.........+|++|++++ ||+| ++++++|+++++|++++
T Consensus 260 ~~~~~~~~~~d~~k~~~~---G~~p~~~~~~~l~~~~~~~~~~ 299 (315)
T 2ydy_A 260 GAQRPRNAQLDCSKLETL---GIGQRTPFRIGIKESLWPFLID 299 (315)
T ss_dssp SSCCCSBCCBCCHHHHHT---TCCCCCCHHHHHHHHHGGGCC-
T ss_pred ccCCCcccccchHHHHhc---CCCCCCCHHHHHHHHHHHHccc
Confidence 111233567899999986 9985 59999999999999876
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=284.29 Aligned_cols=289 Identities=16% Similarity=0.126 Sum_probs=219.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc-----cc------CCCC----ceeeecccccCCCHHHHHHHHhccC-CcEEEEccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE-----KR------DDET----WIFVSSKEADLSNLESTQQLFSKYK-PTHVIHLAA 68 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g-----~~------~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~-~d~Vih~a~ 68 (358)
|+|||||||||||++|+++|+++| ++ .... ...++++.+|++|++++.+++++.+ +|+|||+|+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCCCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccccccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECCC
Confidence 689999999999999999999998 63 2111 1245667899999999999998554 999999999
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEE-------EeeccceecCC--CCCCCccccccCCCCCCCC
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVV-------SCLSTCIFPDK--TTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V-------~~SS~~vy~~~--~~~~~~E~~~~~~~~~p~~ 137 (358)
... .++...+++|+.++.+++++|++. ++++|| |+||.++|+.. ...+++|++ +..|..
T Consensus 82 ~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~----~~~~~~ 151 (364)
T 2v6g_A 82 ANR------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDL----PRLKYM 151 (364)
T ss_dssp CCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTS----CCCSSC
T ss_pred CCc------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccc----cCCccc
Confidence 753 467889999999999999999998 799998 89999999875 246788887 444422
Q ss_pred cchHHHHHHHHHHHHHHHhhcC-ceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQHG-VTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~g-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
..| ..+|++++++++.++ ++++++||++|||+...... ..+++.++...+. ...
T Consensus 152 ~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~-~~~------------------ 206 (364)
T 2v6g_A 152 NFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMM--NLVGTLCVYAAIC-KHE------------------ 206 (364)
T ss_dssp CHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSS--CHHHHHHHHHHHH-HHH------------------
T ss_pred hhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCccc--chHHHHHHHHHHH-Hhc------------------
Confidence 257 358999998887777 99999999999999865211 1223332222111 023
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCC---CceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTG---KPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAE 293 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~ 293 (358)
|.++.+++++ ....+++|++|+|++++.+++++.. .+++||+++++.+|+.|+++
T Consensus 207 ---------------------g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~-~g~~~ni~~~~~~s~~e~~~ 264 (364)
T 2v6g_A 207 ---------------------GKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYA-KNEAFNVSNGDVFKWKHFWK 264 (364)
T ss_dssp ---------------------TCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGG-TTEEEEECCSCCBCHHHHHH
T ss_pred ---------------------CCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCCC-CCceEEecCCCcCCHHHHHH
Confidence 6666666766 3457788999999999999987543 33589999999999999999
Q ss_pred HHHHHhCCCccee--ecCCC----------------------CCC--c------------cc-cccchHHHHhhhCCCCc
Q psy7590 294 AIANAFQFKGRIT--FDTNA----------------------ADG--Q------------LK-KTASNRKLRELRGPGFE 334 (358)
Q Consensus 294 ~i~~~~g~~~~i~--~~~~~----------------------~~~--~------------~~-~~~~~~k~~~~l~~G~~ 334 (358)
.+++.+|.+.... ..+.. ... . .. ..+|++|+++ | ||+
T Consensus 265 ~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-l--G~~ 341 (364)
T 2v6g_A 265 VLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-H--GFL 341 (364)
T ss_dssp HHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-T--TCC
T ss_pred HHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHh-c--CCC
Confidence 9999999765432 11110 000 1 23 4789999998 8 999
Q ss_pred c-ccHHHHHHHHHHHHHHhh
Q psy7590 335 F-TPFQQAVQESVAWFRENH 353 (358)
Q Consensus 335 ~-~~~~~~l~~~~~~~~~~~ 353 (358)
| ++++++++++++|++++.
T Consensus 342 p~~~~~e~l~~~~~~~~~~g 361 (364)
T 2v6g_A 342 GFRNSKNAFISWIDKAKAYK 361 (364)
T ss_dssp CCCCHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHcC
Confidence 5 699999999999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-36 Score=288.47 Aligned_cols=290 Identities=16% Similarity=0.151 Sum_probs=215.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecc-cccCCCHHHHHHHHhccCCcEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSK-EADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~-~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
++|+|||||||||||++|+++|+++|++ .... ...+.++ .+|++|++++.++++ ++|+|
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGV 87 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--CCCEE
Confidence 4579999999999999999999999874 1100 0234556 799999999999888 69999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHh-cCCCEEEEeeccceecCCCC----CCCccccccC--------
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYK-QGVKKVVSCLSTCIFPDKTT----YPIDETMVHN-------- 130 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~-~~v~r~V~~SS~~vy~~~~~----~~~~E~~~~~-------- 130 (358)
||+|+.... ..++...+++|+.++.+++++|.+ .++++|||+||.++|+.... .+++|+++..
T Consensus 88 ih~A~~~~~----~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 163 (342)
T 1y1p_A 88 AHIASVVSF----SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT 163 (342)
T ss_dssp EECCCCCSC----CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred EEeCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence 999997642 246778999999999999999985 67899999999999864321 5677776310
Q ss_pred ----CCCCCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccch
Q psy7590 131 ----GPPHPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSV 204 (358)
Q Consensus 131 ----~~~~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (358)
.+..|.+ .|+.+|..+|.+++.+++.+ +++++++||+++||+...+... ...++.++..+. +
T Consensus 164 ~~~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~-~~~~~~~~~~~~----~------ 231 (342)
T 1y1p_A 164 LPESDPQKSLW-VYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQ-SGSTSGWMMSLF----N------ 231 (342)
T ss_dssp SCTTSTTHHHH-HHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTC-CCHHHHHHHHHH----T------
T ss_pred ccccccccchH-HHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCC-CccHHHHHHHHH----c------
Confidence 0123334 79999999999999998765 7899999999999997654321 124455544443 3
Q ss_pred hhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCC
Q psy7590 205 FESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKD 284 (358)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~ 284 (358)
|+++.+++++ +.++|+|++|+|++++.++.++...+. .+ ++++.
T Consensus 232 ---------------------------------~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~~~g~-~~-~~~g~ 275 (342)
T 1y1p_A 232 ---------------------------------GEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQIERR-RV-YGTAG 275 (342)
T ss_dssp ---------------------------------TCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTTCCSC-EE-EECCE
T ss_pred ---------------------------------CCCccccccC-CcCCEeEHHHHHHHHHHHHcCcccCCc-eE-EEeCC
Confidence 5555545554 678999999999999999987543333 23 34567
Q ss_pred cccHHHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCC----ccccHHHHHHHHHHHHH
Q psy7590 285 EVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGF----EFTPFQQAVQESVAWFR 350 (358)
Q Consensus 285 ~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~----~~~~~~~~l~~~~~~~~ 350 (358)
.+|+.|+++.+.+.+|.+ .+... .+........+|++|++++| || ..++++++|+++++|++
T Consensus 276 ~~s~~e~~~~i~~~~~~~-~~~~~-~~~~~~~~~~~d~~k~~~~l--g~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 276 TFDWNTVLATFRKLYPSK-TFPAD-FPDQGQDLSKFDTAPSLEIL--KSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp EECHHHHHHHHHHHCTTS-CCCCC-CCCCCCCCCEECCHHHHHHH--HHTTCCSCCCHHHHHHHHHCCSC
T ss_pred CCCHHHHHHHHHHHCCCc-cCCCC-CCccccccccCChHHHHHHH--hhcccCCcCCHHHHHHHHHHHhh
Confidence 899999999999999975 22211 11111223667999999999 87 35799999999999875
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=276.45 Aligned_cols=256 Identities=14% Similarity=0.133 Sum_probs=202.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
||+|||||| ||||++|+++|+++|++ .... ...++++.+|++|.+ +. ++|+|||+|+....
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~--~~d~vi~~a~~~~~ 76 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LD--GVTHLLISTAPDSG 76 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CT--TCCEEEECCCCBTT
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cC--CCCEEEECCCcccc
Confidence 369999998 99999999999999984 2111 134566789999844 44 69999999997541
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHh--cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYK--QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~--~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 150 (358)
.. ..+.++++++++ .++++|||+||.++|+.....+++|++ +..|.+ .|+.+|+.+|++
T Consensus 77 -----~~---------~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~----~~~p~~-~Y~~sK~~~E~~ 137 (286)
T 3ius_A 77 -----GD---------PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETT----PLTPTA-ARGRWRVMAEQQ 137 (286)
T ss_dssp -----BC---------HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTS----CCCCCS-HHHHHHHHHHHH
T ss_pred -----cc---------HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCC----CCCCCC-HHHHHHHHHHHH
Confidence 11 135789999999 679999999999999988777899998 777877 799999999999
Q ss_pred HHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccC
Q psy7590 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSL 230 (358)
Q Consensus 151 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (358)
++.+ .+++++++||+++||+..... ..+.+
T Consensus 138 ~~~~---~~~~~~ilRp~~v~G~~~~~~---------------~~~~~-------------------------------- 167 (286)
T 3ius_A 138 WQAV---PNLPLHVFRLAGIYGPGRGPF---------------SKLGK-------------------------------- 167 (286)
T ss_dssp HHHS---TTCCEEEEEECEEEBTTBSSS---------------TTSSS--------------------------------
T ss_pred HHhh---cCCCEEEEeccceECCCchHH---------------HHHhc--------------------------------
Confidence 9886 589999999999999975421 11112
Q ss_pred CccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCC
Q psy7590 231 FPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTN 310 (358)
Q Consensus 231 ~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~ 310 (358)
|.++.+.+. .+.++|+|++|+|++++.+++++.. +++||+++++.+|+.|+++.+.+.+|.+.+......
T Consensus 168 -------~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~ 237 (286)
T 3ius_A 168 -------GGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDP--GAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFD 237 (286)
T ss_dssp -------SCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCT--TCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGG
T ss_pred -------CCccccCCC-CcccceEEHHHHHHHHHHHHhCCCC--CCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchh
Confidence 556666554 4678999999999999999998763 348999999999999999999999998765432211
Q ss_pred --CCCC------ccccccchHHHHhhhCCCCccc--cHHHHHHHHHHH
Q psy7590 311 --AADG------QLKKTASNRKLRELRGPGFEFT--PFQQAVQESVAW 348 (358)
Q Consensus 311 --~~~~------~~~~~~~~~k~~~~l~~G~~~~--~~~~~l~~~~~~ 348 (358)
.... .....+|++|+++.| ||+|+ +++++|+++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~d~~k~~~~l--G~~p~~p~~~e~l~~~~~~ 283 (286)
T 3ius_A 238 KADLTPMARSFYSENKRVRNDRIKEEL--GVRLKYPNYRVGLEALQAD 283 (286)
T ss_dssp GSCCCHHHHHTTSCCCEECCHHHHHTT--CCCCSCSSHHHHHHHHHHT
T ss_pred hhccChhHHHhhcCCceeehHHHHHHh--CCCCCcCCHHHHHHHHHHh
Confidence 1111 145678999999999 99976 699999998863
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-36 Score=284.75 Aligned_cols=290 Identities=20% Similarity=0.264 Sum_probs=203.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
+|+|||||||||||++|+++|+++|++ .... ...+.++.+|++|++++.++++ ++|+|||
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA--GCDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT--TCSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc--CCCEEEE
Confidence 368999999999999999999999973 2111 1135567899999999999998 5999999
Q ss_pred cccccCCccccccch-hhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccc-eecCC---CCCCCccccccCC----CCCC
Q psy7590 66 LAAMVGGLFHNMSHN-LDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTC-IFPDK---TTYPIDETMVHNG----PPHP 135 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~-vy~~~---~~~~~~E~~~~~~----~~~p 135 (358)
+|+... ....++ ..++++|+.++.+++++|.+++ ++||||+||.+ +|+.. ...+++|+++... +..|
T Consensus 87 ~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 163 (338)
T 2rh8_A 87 VATPVH---FASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKP 163 (338)
T ss_dssp ESSCCC---C---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------C
T ss_pred eCCccC---CCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCC
Confidence 998653 122333 3488999999999999999986 99999999987 44321 1136788764221 1222
Q ss_pred CCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGA 215 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (358)
..+.|+.+|..+|.++..+.+.+|++++++||++||||..... ++..+..+... ..
T Consensus 164 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~------~~~~~~~~~~~-~~----------------- 219 (338)
T 2rh8_A 164 PTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSD------VPSSIGLAMSL-IT----------------- 219 (338)
T ss_dssp CCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSS------CCHHHHHHHHH-HH-----------------
T ss_pred ccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHH-Hc-----------------
Confidence 2336999999999999998877799999999999999976432 12222222111 11
Q ss_pred CCCCCCccCCCcccCCccccCCCceEEEcCC------CCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHH
Q psy7590 216 NSFGLDKLDLIPFSLFPFCFTGGDEFKVLGT------GKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ 289 (358)
|.+. .++. +...++|+|++|+|++++.+++++... +.|++++ ..+|+.
T Consensus 220 ----------------------g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~--~~~~~~~-~~~s~~ 273 (338)
T 2rh8_A 220 ----------------------GNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKESAS--GRYICCA-ANTSVP 273 (338)
T ss_dssp ----------------------TCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTTCC--EEEEECS-EEECHH
T ss_pred ----------------------CCcc-ccccccccccccCcccEEEHHHHHHHHHHHHcCCCcC--CcEEEec-CCCCHH
Confidence 2221 1110 112348999999999999999764332 3687765 569999
Q ss_pred HHHHHHHHHhCC-CcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 290 EVAEAIANAFQF-KGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 290 ei~~~i~~~~g~-~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
|+++.+.+.++. +.+....+. . ......+|++|+ +.| ||+|+ +++++|+++++|++++.
T Consensus 274 e~~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~d~~k~-~~l--G~~p~~~l~~gl~~~~~~~~~~~ 334 (338)
T 2rh8_A 274 ELAKFLSKRYPQYKVPTDFGDF-P-PKSKLIISSEKL-VKE--GFSFKYGIEEIYDESVEYFKAKG 334 (338)
T ss_dssp HHHHHHHHHCTTSCCCCCCTTS-C-SSCSCCCCCHHH-HHH--TCCCSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCCCCCCCC-C-cCcceeechHHH-HHh--CCCCCCCHHHHHHHHHHHHHHcC
Confidence 999999998862 222222111 1 112367899999 558 99977 99999999999998764
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-35 Score=273.40 Aligned_cols=288 Identities=19% Similarity=0.200 Sum_probs=202.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------CCCC---c----------eeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------DDET---W----------IFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~---~----------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
|+|||||||||||++|+++|+++|++ .... . ..+.++.+|++|++++.++++ ++|+||
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE--GCVGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT--TCSEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc--CCCEEE
Confidence 68999999999999999999999873 1110 0 124567899999999999998 599999
Q ss_pred EcccccCCccccccc-hhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccce-ecCCC-CCCCccccccCC----CCCCC
Q psy7590 65 HLAAMVGGLFHNMSH-NLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTCI-FPDKT-TYPIDETMVHNG----PPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~~~~~~-~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~v-y~~~~-~~~~~E~~~~~~----~~~p~ 136 (358)
|+|+... ....+ ...++++|+.++.+++++|.+. ++++|||+||.++ |+... ..+++|+++... +..|.
T Consensus 80 h~A~~~~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~ 156 (322)
T 2p4h_X 80 HTASPID---FAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPF 156 (322)
T ss_dssp ECCCCC-----------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred EcCCccc---CCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcc
Confidence 9997542 12223 3458999999999999999998 7899999999974 44322 235667652110 11233
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
.+.|+.+|.++|.++.++++.+|++++++||++||||..... ++..+..+... ..
T Consensus 157 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~------~~~~~~~~~~~-~~------------------ 211 (322)
T 2p4h_X 157 GWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPK------LPDSIEKALVL-VL------------------ 211 (322)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSS------CCHHHHHHTHH-HH------------------
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCC------CCchHHHHHHH-Hh------------------
Confidence 325999999999999998887899999999999999975422 12222222111 11
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
|.+..+ +. ...+|+|++|+|++++.+++++.. .+ .|| +++..+|+.|+++.+.
T Consensus 212 ---------------------g~~~~~-~~--~~~~~i~v~Dva~a~~~~~~~~~~-~g-~~~-~~~~~~s~~e~~~~i~ 264 (322)
T 2p4h_X 212 ---------------------GKKEQI-GV--TRFHMVHVDDVARAHIYLLENSVP-GG-RYN-CSPFIVPIEEMSQLLS 264 (322)
T ss_dssp ---------------------SCGGGC-CE--EEEEEEEHHHHHHHHHHHHHSCCC-CE-EEE-CCCEEEEHHHHHHHHH
T ss_pred ---------------------CCCccC-cC--CCcCEEEHHHHHHHHHHHhhCcCC-CC-CEE-EcCCCCCHHHHHHHHH
Confidence 322211 11 234899999999999999976432 23 488 5678899999999999
Q ss_pred HHhCCCcceeec--CCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 297 NAFQFKGRITFD--TNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 297 ~~~g~~~~i~~~--~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
+.++. .++... ...........+|++|+ +.| ||+|+ +++++|+++++|++++.
T Consensus 265 ~~~~~-~~~~~~~~~~~~~~~~~~~~d~~k~-~~l--G~~p~~~~~~~l~~~~~~~~~~~ 320 (322)
T 2p4h_X 265 AKYPE-YQILTVDELKEIKGARLPDLNTKKL-VDA--GFDFKYTIEDMFDDAIQCCKEKG 320 (322)
T ss_dssp HHCTT-SCCCCTTTTTTCCCEECCEECCHHH-HHT--TCCCCCCHHHHHHHHHHHHHHHT
T ss_pred HhCCC-CCCCCCccccCCCCCcceecccHHH-HHh--CCccCCCHHHHHHHHHHHHHhcC
Confidence 98752 122111 00011113567899999 558 99987 99999999999998763
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=273.13 Aligned_cols=290 Identities=17% Similarity=0.200 Sum_probs=205.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC---------c----eeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET---------W----IFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~---------~----~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
+|+||||||+||||++|+++|+++|++ .... . ..+.++.+|++|++++.++++ ++|+||
T Consensus 5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~Vi 82 (337)
T 2c29_D 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK--GCTGVF 82 (337)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT--TCSEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc--CCCEEE
Confidence 468999999999999999999999973 2211 0 135567899999999999998 599999
Q ss_pred EcccccCCccccccch-hhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccc-eecCCC-CCCCccccccCC----CCCCC
Q psy7590 65 HLAAMVGGLFHNMSHN-LDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTC-IFPDKT-TYPIDETMVHNG----PPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~-~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~-vy~~~~-~~~~~E~~~~~~----~~~p~ 136 (358)
|+|+... ....++ ...+++|+.++.+|+++|.+++ ++||||+||.+ +|+... ..+++|+.+... +..+.
T Consensus 83 h~A~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 159 (337)
T 2c29_D 83 HVATPMD---FESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT 159 (337)
T ss_dssp ECCCCCC---SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred EeccccC---CCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence 9998653 122333 3589999999999999999988 89999999997 555432 234677653110 01122
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
.+.|+.+|..+|.++..+++.+|++++++||++||||..... ++..+...+.. ..
T Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~------~~~~~~~~~~~-~~------------------ 214 (337)
T 2c29_D 160 AWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSS------MPPSLITALSP-IT------------------ 214 (337)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSS------CCHHHHHHTHH-HH------------------
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCC------CCchHHHHHHH-Hc------------------
Confidence 337999999999999998877899999999999999975432 12222221110 11
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
|.+. .++.. ....|+|++|+|++++.+++++... ..|+++ +..+|+.|+++.+.
T Consensus 215 ---------------------g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~~~~--~~~~~~-~~~~s~~e~~~~i~ 268 (337)
T 2c29_D 215 ---------------------GNEA-HYSII-RQGQFVHLDDLCNAHIYLFENPKAE--GRYICS-SHDCIILDLAKMLR 268 (337)
T ss_dssp ---------------------TCGG-GHHHH-TEEEEEEHHHHHHHHHHHHHCTTCC--EEEEEC-CEEEEHHHHHHHHH
T ss_pred ---------------------CCCc-ccccc-CCCCEEEHHHHHHHHHHHhcCcccC--ceEEEe-CCCCCHHHHHHHHH
Confidence 2211 11111 1245999999999999999864332 357654 46799999999999
Q ss_pred HHhCC-CcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 297 NAFQF-KGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 297 ~~~g~-~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
+.++. +.+..+... ........+|++|+ +.| ||+|+ +++++|+++++|++++.
T Consensus 269 ~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~-~~l--G~~p~~~l~e~l~~~~~~~~~~~ 323 (337)
T 2c29_D 269 EKYPEYNIPTEFKGV-DENLKSVCFSSKKL-TDL--GFEFKYSLEDMFTGAVDTCRAKG 323 (337)
T ss_dssp HHCTTSCCCSCCTTC-CTTCCCCEECCHHH-HHH--TCCCCCCHHHHHHHHHHHHHHTT
T ss_pred HHCCCccCCCCCCcc-cCCCccccccHHHH-HHc--CCCcCCCHHHHHHHHHHHHHHcC
Confidence 98852 222222211 11234566899999 678 99976 99999999999998764
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=266.15 Aligned_cols=269 Identities=16% Similarity=0.146 Sum_probs=198.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC---ccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG---LFH 75 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~---~~~ 75 (358)
|||||||||||||++|+++|+++||+ .+. ..++...+...+.++ ++|+|||+|+.... ..+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~--------~~~~~~~~~~~~~l~--~~d~vihla~~~i~~~~~~~ 70 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG--------PGRITWDELAASGLP--SCDAAVNLAGENILNPLRRW 70 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--------TTEEEHHHHHHHCCC--SCSEEEECCCCCSSCTTSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC--------cCeeecchhhHhhcc--CCCEEEEeccCcccchhhhh
Confidence 58999999999999999999999983 111 112222233344555 69999999985321 012
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhcCC--CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSYKQGV--KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~~~~v--~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
+......+.+.|+.+|++|+++++..++ ++||++||.++|++....+.+|++ +..+.. .|+..+...|...
T Consensus 71 ~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~----p~~~~~-~~~~~~~~~e~~~-- 143 (298)
T 4b4o_A 71 NETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDS----PGGDFD-FFSNLVTKWEAAA-- 143 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTC----CCSCSS-HHHHHHHHHHHHH--
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccC----Cccccc-hhHHHHHHHHHHH--
Confidence 2334567889999999999999999874 469999999999998888999998 666666 5888877777643
Q ss_pred HHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcc
Q psy7590 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPF 233 (358)
Q Consensus 154 ~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (358)
.....+++++++||+.||||... .+..+......
T Consensus 144 ~~~~~~~~~~~~r~~~v~g~~~~-----------~~~~~~~~~~~----------------------------------- 177 (298)
T 4b4o_A 144 RLPGDSTRQVVVRSGVVLGRGGG-----------AMGHMLLPFRL----------------------------------- 177 (298)
T ss_dssp CCSSSSSEEEEEEECEEECTTSH-----------HHHHHHHHHHT-----------------------------------
T ss_pred HhhccCCceeeeeeeeEEcCCCC-----------chhHHHHHHhc-----------------------------------
Confidence 33456899999999999999642 33333333332
Q ss_pred ccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCC-
Q psy7590 234 CFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAA- 312 (358)
Q Consensus 234 ~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~- 312 (358)
+.. ...+++++.++|||++|+|+++..+++++... ++||+++++++|+.|+++.+++.+|++..+. .|...
T Consensus 178 ----~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~--g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~p-vP~~~~ 249 (298)
T 4b4o_A 178 ----GLG-GPIGSGHQFFPWIHIGDLAGILTHALEANHVH--GVLNGVAPSSATNAEFAQTFGAALGRRAFIP-LPSAVV 249 (298)
T ss_dssp ----TCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCC--EEEEESCSCCCBHHHHHHHHHHHHTCCCCCC-BCHHHH
T ss_pred ----CCc-ceecccCceeecCcHHHHHHHHHHHHhCCCCC--CeEEEECCCccCHHHHHHHHHHHhCcCCccc-CCHHHH
Confidence 322 33578899999999999999999999986543 3899999999999999999999999875332 22100
Q ss_pred ----C------CccccccchHHHHhhhCCCCccc--cHHHHHHHHHH
Q psy7590 313 ----D------GQLKKTASNRKLRELRGPGFEFT--PFQQAVQESVA 347 (358)
Q Consensus 313 ----~------~~~~~~~~~~k~~~~l~~G~~~~--~~~~~l~~~~~ 347 (358)
+ .......+++|+++ + ||+++ +++++|++.++
T Consensus 250 ~~~~g~~~~~~~l~~~rv~~~kl~~-~--Gf~f~yp~l~~al~~l~~ 293 (298)
T 4b4o_A 250 QAVFGRQRAIMLLEGQKVIPRRTLA-T--GYQYSFPELGAALKEIAE 293 (298)
T ss_dssp HHHHCHHHHHHHHCCCCBCCHHHHH-T--TCCCSCCSHHHHHHHHHH
T ss_pred HHHhcchhHHHhhCCCEEcHHHHHH-C--CCCCCCCCHHHHHHHHHH
Confidence 0 01234577899987 4 99965 79999999987
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=255.15 Aligned_cols=260 Identities=17% Similarity=0.210 Sum_probs=202.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 78 (358)
|+||||||||+||++|+++|++ |++ ....... +.+|++|++++.++++..++|+|||+|+.... .....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~ 75 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQGG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDV-DKCEI 75 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCTTC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCH-HHHHH
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCCCC---ceeccCCHHHHHHHHHhcCCCEEEECCcccCh-hhhhh
Confidence 3799999999999999999995 653 1110011 57999999999999986669999999997542 12235
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH 158 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~ 158 (358)
++...+++|+.++.+++++|.+.++ +|||+||.++|+... .+++|++ +..|.+ .|+.+|..+|.+++.
T Consensus 76 ~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~-~~~~e~~----~~~~~~-~Y~~sK~~~e~~~~~----- 143 (273)
T 2ggs_A 76 EKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEK-GNYKEED----IPNPIN-YYGLSKLLGETFALQ----- 143 (273)
T ss_dssp CHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSS-CSBCTTS----CCCCSS-HHHHHHHHHHHHHCC-----
T ss_pred CHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCC-CCcCCCC----CCCCCC-HHHHHHHHHHHHHhC-----
Confidence 6788999999999999999999887 899999999998653 3788887 666666 799999999999865
Q ss_pred CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCC
Q psy7590 159 GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGG 238 (358)
Q Consensus 159 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (358)
++++++||+.+||+. . +...+...... +
T Consensus 144 -~~~~~iR~~~v~G~~--------~----~~~~~~~~~~~---------------------------------------~ 171 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRNK--------G----FPIYVYKTLKE---------------------------------------G 171 (273)
T ss_dssp -TTCEEEEECCCBSSS--------S----HHHHHHHHHHT---------------------------------------T
T ss_pred -CCeEEEecccccccc--------H----HHHHHHHHHHc---------------------------------------C
Confidence 568999999999821 1 23333333333 6
Q ss_pred ceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecC----CCCCC
Q psy7590 239 DEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDT----NAADG 314 (358)
Q Consensus 239 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~----~~~~~ 314 (358)
.++.+.++ .++++|++|+|++++.++.++. .++||+++ +.+|+.|+++.+.+.+|.+.++.... .....
T Consensus 172 ~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~---~g~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 244 (273)
T 2ggs_A 172 KTVFAFKG---YYSPISARKLASAILELLELRK---TGIIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKR 244 (273)
T ss_dssp CCEEEESC---EECCCBHHHHHHHHHHHHHHTC---CEEEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCC
T ss_pred CCEEeecC---CCCceEHHHHHHHHHHHHhcCc---CCeEEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCC
Confidence 66666654 7889999999999999998753 23899998 99999999999999999887654221 11122
Q ss_pred ccccccchHHHHhhhCCCCccc--cHHHHH
Q psy7590 315 QLKKTASNRKLRELRGPGFEFT--PFQQAV 342 (358)
Q Consensus 315 ~~~~~~~~~k~~~~l~~G~~~~--~~~~~l 342 (358)
.....+|++|++++| ||+|+ ++++++
T Consensus 245 ~~~~~~d~~k~~~~l--G~~p~~~~l~~~~ 272 (273)
T 2ggs_A 245 PYDSSLDSSRARKIL--STDFYTLDLDGMV 272 (273)
T ss_dssp CSBCCBCCHHHHHHC--SSCCCSCCGGGCC
T ss_pred CcccccCHHHHHHHh--CCCCCCccccccc
Confidence 345689999999999 99983 888765
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=283.28 Aligned_cols=276 Identities=13% Similarity=0.117 Sum_probs=198.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNM 77 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 77 (358)
||+|||||||||||++|++.|++.|++ ..... ..+.+|+.+. +.+++. ++|+|||+|+.........
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---~~v~~d~~~~--~~~~l~--~~D~Vih~A~~~~~~~~~~ 219 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---GKRFWDPLNP--ASDLLD--GADVLVHLAGEPIFGRFND 219 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---TCEECCTTSC--CTTTTT--TCSEEEECCCC-----CCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---cceeecccch--hHHhcC--CCCEEEECCCCccccccch
Confidence 689999999999999999999999983 22222 2246777643 345565 6999999999764322344
Q ss_pred cchhhHHHHHHHHHHHHHHH-HHhcCCCEEEEeeccceec-CCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHH
Q psy7590 78 SHNLDFFRVNMKINDNVLDT-SYKQGVKKVVSCLSTCIFP-DKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYY 155 (358)
Q Consensus 78 ~~~~~~~~~nv~~~~~ll~a-a~~~~v~r~V~~SS~~vy~-~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~ 155 (358)
.++..++++|+.++.+|+++ ++..++++|||+||.++|+ +....+++|++ +. +.+ .|+.+|...|.++..+
T Consensus 220 ~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~----~~-~~~-~y~~~~~~~E~~~~~~- 292 (516)
T 3oh8_A 220 SHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEES----ES-GDD-FLAEVCRDWEHATAPA- 292 (516)
T ss_dssp GGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTS----CC-CSS-HHHHHHHHHHHTTHHH-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCC----CC-CcC-hHHHHHHHHHHHHHHH-
Confidence 56778999999999999999 6677899999999999999 44456788887 44 555 7999999999887554
Q ss_pred hhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcccc
Q psy7590 156 QQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCF 235 (358)
Q Consensus 156 ~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (358)
+..|++++++||++|||+... ++..+......
T Consensus 293 ~~~gi~~~ilRp~~v~Gp~~~-----------~~~~~~~~~~~------------------------------------- 324 (516)
T 3oh8_A 293 SDAGKRVAFIRTGVALSGRGG-----------MLPLLKTLFST------------------------------------- 324 (516)
T ss_dssp HHTTCEEEEEEECEEEBTTBS-----------HHHHHHHTTC--------------------------------------
T ss_pred HhCCCCEEEEEeeEEECCCCC-----------hHHHHHHHHHh-------------------------------------
Confidence 556999999999999999732 33334333332
Q ss_pred CCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCC--C--
Q psy7590 236 TGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTN--A-- 311 (358)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~--~-- 311 (358)
|... +++++++.++|||++|+|++++.+++++... ++||++++..+|+.|+++.+++.+|.+..+..... +
T Consensus 325 --g~~~-~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~--g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~ 399 (516)
T 3oh8_A 325 --GLGG-KFGDGTSWFSWIAIDDLTDIYYRAIVDAQIS--GPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKIL 399 (516)
T ss_dssp ----CC-CCTTSCCEECEEEHHHHHHHHHHHHHCTTCC--EEEEESCSCCEEHHHHHHHTTC------------------
T ss_pred --CCCc-ccCCCCceEceEeHHHHHHHHHHHHhCcccC--CcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 3322 4678888999999999999999999876533 38999999999999999999999998753221110 0
Q ss_pred CC-------CccccccchHHHHhhhCCCCccc--cHHHHHHHHHHHH
Q psy7590 312 AD-------GQLKKTASNRKLRELRGPGFEFT--PFQQAVQESVAWF 349 (358)
Q Consensus 312 ~~-------~~~~~~~~~~k~~~~l~~G~~~~--~~~~~l~~~~~~~ 349 (358)
.. .......+++|+++ | ||+|+ +++++|++++++.
T Consensus 400 ~g~~~~~~~~~~~~~~~~~kl~~-l--G~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 400 LGSQGAEELALASQRTAPAALEN-L--SHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp ---CCGGGGGGCEEEECCHHHHH-T--TCCCSCSSHHHHHHHHHTCC
T ss_pred hCCchhHHHhhcCCeechHHHHH-C--CCCCCCCCHHHHHHHHhCcc
Confidence 01 11234568899985 6 99965 5999999998753
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=269.23 Aligned_cols=289 Identities=12% Similarity=0.117 Sum_probs=206.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------------------CceeeecccccCCCHHHHHH
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------------------TWIFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------------------~~~~~~~~~~Dl~~~~~~~~ 53 (358)
.||+||||||||+||++|+++|++.|++ ... ....+.++.+|+++++++.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 146 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 146 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence 3679999999999999999999988873 222 0134566789999988887
Q ss_pred HHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecC-----CCCCCCccccc
Q psy7590 54 LFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPD-----KTTYPIDETMV 128 (358)
Q Consensus 54 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~-----~~~~~~~E~~~ 128 (358)
++. ++|+|||+|+... ...+....+++|+.++.+++++|.+ ++++|||+||.++ |. ....+++|+++
T Consensus 147 ~~~--~~d~Vih~A~~~~----~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~ 218 (427)
T 4f6c_A 147 LPE--NMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADV 218 (427)
T ss_dssp CSS--CCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCS
T ss_pred CcC--CCCEEEECCcccC----CCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCcccccccc
Confidence 433 7999999999864 2356788999999999999999999 7789999999998 43 23467888874
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCc---ccchhHHHHHHHHhhhhcCccchh
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLES---SHVIPGLIRKLYDTIEKGKDQSVF 205 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 205 (358)
.. +..+.+ .|+.+|+.+|.+++.+++ .|++++++||++|||+........ ..+++.++.. ..+
T Consensus 219 ~~-~~~~~~-~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~----~~~------- 284 (427)
T 4f6c_A 219 YK-GQLLTS-PYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMND----LLQ------- 284 (427)
T ss_dssp CS-SCCCCS-HHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHH----HHH-------
T ss_pred cc-CCCCCC-chHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHH----HHh-------
Confidence 32 234555 899999999999999865 699999999999999986543111 1223334333 333
Q ss_pred hcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCc
Q psy7590 206 ESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDE 285 (358)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~ 285 (358)
+.+++. +.++..++|+|++|+|++++.++..+. .+++||++++++
T Consensus 285 --------------------------------~~~~~~-~~~~~~~~~v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~ 329 (427)
T 4f6c_A 285 --------------------------------LDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNK 329 (427)
T ss_dssp --------------------------------SSEEEH-HHHTCEECCEEHHHHHHHHHHHTTSCC--CCSEEEESCSCC
T ss_pred --------------------------------cCCCCC-ccccceEEEeeHHHHHHHHHHHHcCCC--CCCEEEecCCCC
Confidence 556654 345778999999999999999998865 445999999999
Q ss_pred ccHHHHHHHHHHHhCCCcceeecCC----------C--------CCCccccccchHHHH---hhhCCCCccccH-HHHHH
Q psy7590 286 VTIAEVAEAIANAFQFKGRITFDTN----------A--------ADGQLKKTASNRKLR---ELRGPGFEFTPF-QQAVQ 343 (358)
Q Consensus 286 ~s~~ei~~~i~~~~g~~~~i~~~~~----------~--------~~~~~~~~~~~~k~~---~~l~~G~~~~~~-~~~l~ 343 (358)
+++.|+++.+.+ ++ .+....+. . ........+|+++.. +.+ ||.+.++ ++.++
T Consensus 330 ~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--G~~~~~~~~~~l~ 404 (427)
T 4f6c_A 330 MPVKSLLECVKR-KE--IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHI--SEKWPTITNNWLY 404 (427)
T ss_dssp EEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTCHHHHHHHHHHHTSEECEECCHHHHHHHHHT--TCCCCCCCHHHHH
T ss_pred CcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCchhhhhhhhccccCCceeccHHHHHHHHHhc--CCCCCCCCHHHHH
Confidence 999999999998 55 22111000 0 001123456666655 445 9996644 55899
Q ss_pred HHHHHHHHhhc
Q psy7590 344 ESVAWFRENHS 354 (358)
Q Consensus 344 ~~~~~~~~~~~ 354 (358)
++++|+++..+
T Consensus 405 ~~~~~l~~~~~ 415 (427)
T 4f6c_A 405 HWAQYIKTIFN 415 (427)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999888754
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-32 Score=264.44 Aligned_cols=221 Identities=22% Similarity=0.217 Sum_probs=185.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccC-CCHHHHHHHHhccCCcEEEEcccccCCccccccchhhH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADL-SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDF 83 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~ 83 (358)
|||||||||||||++|+++|+++|+ ++++.+|. .|++++.++++ ++|+|||+|+...+ .++...
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~--------~~v~~~d~~~d~~~l~~~~~--~~d~Vih~a~~~~~-----~~~~~~ 65 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD--------HHIFEVHRQTKEEELESALL--KADFIVHLAGVNRP-----EHDKEF 65 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC--------CEEEECCTTCCHHHHHHHHH--HCSEEEECCCSBCT-----TCSTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--------CEEEEECCCCCHHHHHHHhc--cCCEEEECCcCCCC-----CCHHHH
Confidence 4899999999999999999999975 34557899 99999999999 49999999997652 456778
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-EEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceE
Q psy7590 84 FRVNMKINDNVLDTSYKQGVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTY 162 (358)
Q Consensus 84 ~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~ 162 (358)
++.|+.++.+|+++|++++++ +|||+||.++|+ .+ .|+.+|..+|++++.++++.|+++
T Consensus 66 ~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-------------------~~-~Y~~sK~~~E~~~~~~~~~~g~~~ 125 (369)
T 3st7_A 66 SLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-------------------DN-PYGESKLQGEQLLREYAEEYGNTV 125 (369)
T ss_dssp SSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-------------------CS-HHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-------------------CC-CchHHHHHHHHHHHHHHHHhCCCE
Confidence 889999999999999999987 999999999986 12 799999999999999999899999
Q ss_pred EEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEE
Q psy7590 163 TSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFK 242 (358)
Q Consensus 163 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 242 (358)
+++||+++||+...+. ...+++.++.. +.. +.++.
T Consensus 126 ~i~R~~~v~G~~~~~~--~~~~~~~~~~~----~~~---------------------------------------~~~~~ 160 (369)
T 3st7_A 126 YIYRWPNLFGKWCKPN--YNSVIATFCYK----IAR---------------------------------------NEEIQ 160 (369)
T ss_dssp EEEEECEEECTTCCTT--SSCHHHHHHHH----HHT---------------------------------------TCCCC
T ss_pred EEEECCceeCCCCCCC--cchHHHHHHHH----HHc---------------------------------------CCCeE
Confidence 9999999999987653 22344444443 344 66665
Q ss_pred EcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCccee
Q psy7590 243 VLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 243 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
+ .+++..++|+|++|+|++++.+++++....+++||+++++.+|+.|+++.+.+.+|.+..+.
T Consensus 161 ~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~~~ 223 (369)
T 3st7_A 161 V-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRT 223 (369)
T ss_dssp C-SCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred e-cCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCCCcccc
Confidence 5 47788899999999999999999987653235899999999999999999999999765443
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-31 Score=246.47 Aligned_cols=249 Identities=17% Similarity=0.135 Sum_probs=192.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc--ccc------CCCCc-----eeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE--EKR------DDETW-----IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~--g~~------~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
|+|||||||||+|++|++.|+++ |++ ..... ..++++.+|++|++++.++++ ++|+|||+|+...
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~ 78 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFA--GVSKLLFISGPHY 78 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECCCCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHh--cCCEEEEcCCCCc
Confidence 47999999999999999999998 873 22221 235567899999999999998 5999999998521
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHH
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLN 151 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~ 151 (358)
. .+.|+.++.+++++|+++++++|||+||.++|.. | . .|+.+|..+|.++
T Consensus 79 ------~-----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~-----------------~-~-~y~~~K~~~E~~~ 128 (287)
T 2jl1_A 79 ------D-----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES-----------------I-I-PLAHVHLATEYAI 128 (287)
T ss_dssp ------C-----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC-----------------C-S-THHHHHHHHHHHH
T ss_pred ------C-----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-----------------C-C-chHHHHHHHHHHH
Confidence 1 1679999999999999999999999999987621 1 1 6999999999998
Q ss_pred HHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCC
Q psy7590 152 KAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLF 231 (358)
Q Consensus 152 ~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (358)
+. +|++++++||+.++|+... .++...+ ..
T Consensus 129 ~~----~~~~~~ilrp~~~~~~~~~----------~~~~~~~---~~--------------------------------- 158 (287)
T 2jl1_A 129 RT----TNIPYTFLRNALYTDFFVN----------EGLRAST---ES--------------------------------- 158 (287)
T ss_dssp HH----TTCCEEEEEECCBHHHHSS----------GGGHHHH---HH---------------------------------
T ss_pred HH----cCCCeEEEECCEeccccch----------hhHHHHh---hC---------------------------------
Confidence 54 6899999999988876311 1222222 12
Q ss_pred ccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCC
Q psy7590 232 PFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNA 311 (358)
Q Consensus 232 ~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~ 311 (358)
+.. . ...++..++|+|++|+|++++.++.++.. .+++||+++++.+|+.|+++.+.+.+|.+.++...+..
T Consensus 159 ------~~~-~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~ 229 (287)
T 2jl1_A 159 ------GAI-V-TNAGSGIVNSVTRNELALAAATVLTEEGH-ENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFE 229 (287)
T ss_dssp ------TEE-E-ESCTTCCBCCBCHHHHHHHHHHHHTSSSC-TTEEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHH
T ss_pred ------Cce-e-ccCCCCccCccCHHHHHHHHHHHhcCCCC-CCcEEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHH
Confidence 433 2 34566778999999999999999987543 34589999999999999999999999988776544421
Q ss_pred C--------CCc----------------cccccchHHHHhhhCCCCccccHHHHHHHHHH
Q psy7590 312 A--------DGQ----------------LKKTASNRKLRELRGPGFEFTPFQQAVQESVA 347 (358)
Q Consensus 312 ~--------~~~----------------~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~ 347 (358)
. ... .....|++|+++.| | .+++++++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--G-~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 230 EEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLI--G-SLTPLKETVKQALK 286 (287)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHH--S-SCCCHHHHHHHHHT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHh--C-CCCCHHHHHHHHhc
Confidence 0 000 12456788999999 9 77899999999875
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-32 Score=242.59 Aligned_cols=217 Identities=15% Similarity=0.103 Sum_probs=164.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----ceeeecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
|.+||+||||||||+||++|+++|+++|++ .... ...++++.+|++|++++.++++ ++|+|||+|+..
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~ 78 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK--GADAVISAFNPG 78 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT--TCSEEEECCCC-
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhc--CCCEEEEeCcCC
Confidence 777899999999999999999999999983 1111 1456677999999999999999 599999999864
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHH
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 150 (358)
. .+ ...++.|+.++.+++++|++.++++|||+||.++|..... ...|+. +..|.+ .|+.+|...|.+
T Consensus 79 ~------~~-~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-~~~~~~----~~~p~~-~Y~~sK~~~e~~ 145 (227)
T 3dhn_A 79 W------NN-PDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG-LRLMDS----GEVPEN-ILPGVKALGEFY 145 (227)
T ss_dssp ------------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT-EEGGGT----TCSCGG-GHHHHHHHHHHH
T ss_pred C------CC-hhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC-CccccC----CcchHH-HHHHHHHHHHHH
Confidence 2 12 2378889999999999999999999999999987754432 234444 556666 799999999999
Q ss_pred HHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccC
Q psy7590 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSL 230 (358)
Q Consensus 151 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (358)
++.+.+..+++++++||+++||+...... +. .
T Consensus 146 ~~~~~~~~~~~~~ilrp~~v~g~~~~~~~----~~------------~-------------------------------- 177 (227)
T 3dhn_A 146 LNFLMKEKEIDWVFFSPAADMRPGVRTGR----YR------------L-------------------------------- 177 (227)
T ss_dssp HHTGGGCCSSEEEEEECCSEEESCCCCCC----CE------------E--------------------------------
T ss_pred HHHHhhccCccEEEEeCCcccCCCccccc----ee------------e--------------------------------
Confidence 99988788999999999999999754321 00 0
Q ss_pred CccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHH
Q psy7590 231 FPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAE 290 (358)
Q Consensus 231 ~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~e 290 (358)
+....+. .+.. ++|+|++|+|++++.+++++...+ ++|+++++++.++++
T Consensus 178 -------~~~~~~~-~~~~-~~~i~~~Dva~ai~~~l~~~~~~g-~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 178 -------GKDDMIV-DIVG-NSHISVEDYAAAMIDELEHPKHHQ-ERFTIGYLEHHHHHH 227 (227)
T ss_dssp -------ESSBCCC-CTTS-CCEEEHHHHHHHHHHHHHSCCCCS-EEEEEECCSCCC---
T ss_pred -------cCCCccc-CCCC-CcEEeHHHHHHHHHHHHhCccccC-cEEEEEeehhcccCC
Confidence 1111111 1222 789999999999999999876544 589999999988763
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.6e-32 Score=271.34 Aligned_cols=290 Identities=13% Similarity=0.117 Sum_probs=206.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------------------CceeeecccccCCCHHHHHH
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------------------TWIFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------------------~~~~~~~~~~Dl~~~~~~~~ 53 (358)
.||+|||||||||||++|+++|++.|++ ... ....+.++.+|+++++++.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 4679999999999999999999888873 222 0124567799999988777
Q ss_pred HHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccce--ecC--CCCCCCcccccc
Q psy7590 54 LFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCI--FPD--KTTYPIDETMVH 129 (358)
Q Consensus 54 ~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~v--y~~--~~~~~~~E~~~~ 129 (358)
++. ++|+|||+|+... ...++..+.++|+.++.+|+++|.+ +.++|||+||.++ |.. ....+++|+++.
T Consensus 228 ~~~--~~D~Vih~Aa~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~ 300 (508)
T 4f6l_B 228 LPE--NMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVY 300 (508)
T ss_dssp CSS--CCSEEEECCCC------------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSC
T ss_pred Ccc--CCCEEEECCceec----CCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCccccccccc
Confidence 333 7999999999864 2356778899999999999999999 6789999999999 221 234578888743
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCC---cccchhHHHHHHHHhhhhcCccchhh
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE---SSHVIPGLIRKLYDTIEKGKDQSVFE 206 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (358)
. +..|.+ .|+.+|+.+|.+++.+.+ .|++++++||++|||+....... ....++.+ +....+
T Consensus 301 ~-~~~~~~-~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~----i~~~~~-------- 365 (508)
T 4f6l_B 301 K-GQLLTS-PYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMV----MNDLLQ-------- 365 (508)
T ss_dssp S-SBCCCS-HHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHH----HHHHTT--------
T ss_pred c-cccCCC-cHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHH----HHHHHH--------
Confidence 2 233555 899999999999999765 69999999999999998654311 11223333 333333
Q ss_pred cccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcc
Q psy7590 207 SRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEV 286 (358)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~ 286 (358)
+..++. +.++..++|+|++|+|++++.++.++. .+++||++++.++
T Consensus 366 -------------------------------~~~~~~-~~g~~~~~~v~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~~ 411 (508)
T 4f6l_B 366 -------------------------------LDCIGV-SMAEMPVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNKM 411 (508)
T ss_dssp -------------------------------CSEEET-TGGGSEEECEEHHHHHHHHHHHTTBCC--SCSEEEESCSCEE
T ss_pred -------------------------------cCCCCC-CccCceEEEEcHHHHHHHHHHHHhCCC--CCCEEEeCCCCCC
Confidence 555553 346788999999999999999998865 3459999999999
Q ss_pred cHHHHHHHHHHHhCCCcceeec--------CC----------CCCCccccccchHHHH---hhhCCCCccc-cHHHHHHH
Q psy7590 287 TIAEVAEAIANAFQFKGRITFD--------TN----------AADGQLKKTASNRKLR---ELRGPGFEFT-PFQQAVQE 344 (358)
Q Consensus 287 s~~ei~~~i~~~~g~~~~i~~~--------~~----------~~~~~~~~~~~~~k~~---~~l~~G~~~~-~~~~~l~~ 344 (358)
++.|+++.+.+.. .+.... .. .........+|+++.+ +.+ ||.+. .-++.+++
T Consensus 412 s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--G~~~~~~~~~~l~~ 486 (508)
T 4f6l_B 412 PVKSLLECVKRKE---IELVSDESFNEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHI--SEKWPTITNNWLYH 486 (508)
T ss_dssp EHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHHHHHHHHTGGGSEECEECCHHHHHHHHHH--SCCCCCCCHHHHHH
T ss_pred CHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCccchhcccccccCcceecchHHHHHHHHHc--CCCCCCCCHHHHHH
Confidence 9999999999754 111100 00 0001123455655544 445 99955 44778899
Q ss_pred HHHHHHHhhc
Q psy7590 345 SVAWFRENHS 354 (358)
Q Consensus 345 ~~~~~~~~~~ 354 (358)
+++|+++..+
T Consensus 487 ~~~~~~~~~~ 496 (508)
T 4f6l_B 487 WAQYIKTIFN 496 (508)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9998887654
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-31 Score=264.40 Aligned_cols=248 Identities=13% Similarity=0.085 Sum_probs=188.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHc---ccc------CCCC--------------------------ceeeecccccCC-
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEE---EKR------DDET--------------------------WIFVSSKEADLS- 46 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~---g~~------~~~~--------------------------~~~~~~~~~Dl~- 46 (358)
++|+|||||||||||++|+++|++. |++ .... ...+.++.+|++
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~ 151 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE 151 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence 3679999999999999999999998 663 1110 134566789998
Q ss_pred -----CHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCC
Q psy7590 47 -----NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTY 121 (358)
Q Consensus 47 -----~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~ 121 (358)
+.+.+.++++ ++|+|||+|+.... .+....+++|+.++.+|+++|.+.++++|||+||.++|+.....
T Consensus 152 ~~~gld~~~~~~~~~--~~D~Vih~Aa~~~~-----~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~ 224 (478)
T 4dqv_A 152 PDLGLDQPMWRRLAE--TVDLIVDSAAMVNA-----FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPS 224 (478)
T ss_dssp GGGGCCHHHHHHHHH--HCCEEEECCSSCSB-----SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTT
T ss_pred cccCCCHHHHHHHHc--CCCEEEECccccCC-----cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCC
Confidence 6778999988 59999999998752 56677899999999999999999999999999999999987777
Q ss_pred CCccccccCCCCCCCC----------cchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC-CCCCcccchhHHHH
Q psy7590 122 PIDETMVHNGPPHPSN----------FGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN-YNLESSHVIPGLIR 190 (358)
Q Consensus 122 ~~~E~~~~~~~~~p~~----------~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~ 190 (358)
+++|+.+ ..|.+ ..|+.+|+.+|.+++.+++..|++++++||++|||+... .......+++.++.
T Consensus 225 ~~~E~~~----~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~ 300 (478)
T 4dqv_A 225 AFTEDAD----IRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVL 300 (478)
T ss_dssp TCCSSSC----HHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHH
T ss_pred CcCCccc----ccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHH
Confidence 8888763 22211 259999999999999998878999999999999998642 11111233444433
Q ss_pred HHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCce-EEEcCC------CCceeeeeeHHHHHHHH
Q psy7590 191 KLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDE-FKVLGT------GKPLRQFIYSLDLARLF 263 (358)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~------~~~~~~~i~v~D~a~~~ 263 (358)
.... . |.. ..+++. ++..++|+|++|+|+++
T Consensus 301 ~~~~---~---------------------------------------g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai 338 (478)
T 4dqv_A 301 SLMA---T---------------------------------------GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAI 338 (478)
T ss_dssp HHHH---H---------------------------------------CEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHH
T ss_pred HHHH---c---------------------------------------CcccccccccccccccccceeeeeeHHHHHHHH
Confidence 2221 1 211 111111 25678999999999999
Q ss_pred HHHHHhc---CCCCCceEEccCCCc--ccHHHHHHHHHHHhCCCcc
Q psy7590 264 IWVLREY---DSVEPIILSVDEKDE--VTIAEVAEAIANAFQFKGR 304 (358)
Q Consensus 264 ~~~~~~~---~~~~~~v~n~~~~~~--~s~~ei~~~i~~~~g~~~~ 304 (358)
+.++.+. ....+++||+++++. +|+.|+++.+.+. |.+.+
T Consensus 339 ~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~ 383 (478)
T 4dqv_A 339 AVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIR 383 (478)
T ss_dssp HHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCE
T ss_pred HHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCCcc
Confidence 9999862 122346999999887 9999999999996 76654
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=247.10 Aligned_cols=249 Identities=14% Similarity=0.094 Sum_probs=186.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHc--ccc------CCCCc-----eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEE--EKR------DDETW-----IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~--g~~------~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
+||||||||++|++|+++|+++ |++ ..... ..+.++.+|++|++++.++++ ++|+|||+|+...
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~~~- 77 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQ--GVEKLLLISSSEV- 77 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTT--TCSEEEECC-----
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCc-
Confidence 5899999999999999999998 773 22211 235567899999999999998 5999999998531
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
..|+.++++++++|+++++++|||+||.++|.. | . .|+.+|..+|.+++
T Consensus 78 ------------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~-----------------~-~-~y~~sK~~~e~~~~ 126 (286)
T 2zcu_A 78 ------------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADTS-----------------P-L-GLADEHIETEKMLA 126 (286)
T ss_dssp ----------------CHHHHHHHHHHHHTCCEEEEEEETTTTTC-----------------C-S-TTHHHHHHHHHHHH
T ss_pred ------------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-----------------c-c-hhHHHHHHHHHHHH
Confidence 147889999999999999999999999987610 1 2 69999999999986
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
. +|++++++||+.++++... ++.... ..
T Consensus 127 ~----~~~~~~ilrp~~~~~~~~~-----------~~~~~~---~~---------------------------------- 154 (286)
T 2zcu_A 127 D----SGIVYTLLRNGWYSENYLA-----------SAPAAL---EH---------------------------------- 154 (286)
T ss_dssp H----HCSEEEEEEECCBHHHHHT-----------THHHHH---HH----------------------------------
T ss_pred H----cCCCeEEEeChHHhhhhHH-----------HhHHhh---cC----------------------------------
Confidence 4 5899999999876654211 122222 11
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCC
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAA 312 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~ 312 (358)
+ .+. .+.++..++|+|++|+|++++.++.++.. .+++||+++++.+|+.|+++.+.+.+|.+.++...+...
T Consensus 155 -----~-~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~ 226 (286)
T 2zcu_A 155 -----G-VFI-GAAGDGKIASATRADYAAAAARVISEAGH-EGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEAD 226 (286)
T ss_dssp -----T-EEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSC-TTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHH
T ss_pred -----C-cee-ccCCCCccccccHHHHHHHHHHHhcCCCC-CCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHH
Confidence 3 343 45667788999999999999999987543 335899999989999999999999999887665443210
Q ss_pred --------CCc----------------cccccchHHHHhhhCCCCccccHHHHHHHHHHHHH
Q psy7590 313 --------DGQ----------------LKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFR 350 (358)
Q Consensus 313 --------~~~----------------~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~ 350 (358)
... .....|++++++.| ||.+++++++|+++++|+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--g~~~~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 227 FAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLI--GHPTTTLAESVSHLFNVNN 286 (286)
T ss_dssp HHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHH--TSCCCCHHHHHHGGGC---
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHh--CcCCCCHHHHHHHHHhhcC
Confidence 000 12456788999999 9888899999999998873
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-31 Score=254.55 Aligned_cols=270 Identities=13% Similarity=0.162 Sum_probs=194.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CC-C---C--------ceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DD-E---T--------WIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~-~---~--------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
.+|+||||||||++|++|++.|++.|++ .. . + ...++++.+|++|++++.++++..++|+||
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 88 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV 88 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence 3468999999999999999999999874 21 0 0 134667799999999999999966799999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
|+++.. |+.++.+|+++|++++ +++||+ | +||. +.+|+. +..|.+ .|+.+
T Consensus 89 ~~a~~~----------------n~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~----~~~p~~-~y~~s 139 (346)
T 3i6i_A 89 STVGGE----------------SILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRAD----PVEPGL-NMYRE 139 (346)
T ss_dssp ECCCGG----------------GGGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCC----CCTTHH-HHHHH
T ss_pred ECCchh----------------hHHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccC----cCCCcc-hHHHH
Confidence 999863 6778899999999999 999985 4 3542 345554 455555 79999
Q ss_pred HHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCcc
Q psy7590 144 KRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223 (358)
Q Consensus 144 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
|+.+|++++. +|++++++||+.++|...... ..... ....
T Consensus 140 K~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~----------~~~~~-~~~~------------------------- 179 (346)
T 3i6i_A 140 KRRVRQLVEE----SGIPFTYICCNSIASWPYYNN----------IHPSE-VLPP------------------------- 179 (346)
T ss_dssp HHHHHHHHHH----TTCCBEEEECCEESSCCCSCC----------------CCCC-------------------------
T ss_pred HHHHHHHHHH----cCCCEEEEEecccccccCccc----------ccccc-ccCC-------------------------
Confidence 9999999865 689999999999999653211 11110 0011
Q ss_pred CCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccC-CCcccHHHHHHHHHHHhCCC
Q psy7590 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE-KDEVTIAEVAEAIANAFQFK 302 (358)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~-~~~~s~~ei~~~i~~~~g~~ 302 (358)
+..+.++++++..++|+|++|+|++++.++.++...+ ++|++++ ++.+|+.|+++.+.+.+|++
T Consensus 180 --------------~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~i~g~~~~~s~~e~~~~~~~~~g~~ 244 (346)
T 3i6i_A 180 --------------TDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLN-KSVHFRPSCNCLNINELASVWEKKIGRT 244 (346)
T ss_dssp --------------SSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGGTT-EEEECCCGGGEECHHHHHHHHHHHHTSC
T ss_pred --------------CceEEEccCCCceEEecCHHHHHHHHHHHHhCccccC-eEEEEeCCCCCCCHHHHHHHHHHHHCCC
Confidence 5567888999999999999999999999999864433 4788875 58999999999999999998
Q ss_pred cceeecCCCCC------C--c-----------------cccc---cchHHHHhhhCCCCccccHHHHHHHHHHHHHHhhc
Q psy7590 303 GRITFDTNAAD------G--Q-----------------LKKT---ASNRKLRELRGPGFEFTPFQQAVQESVAWFRENHS 354 (358)
Q Consensus 303 ~~i~~~~~~~~------~--~-----------------~~~~---~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~~~~ 354 (358)
.++...+.... . . ..+. .+..++++++ |++++++++|.++++++|++++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-p~~~~t~~~e~l~~~~~~~~~~~~ 323 (346)
T 3i6i_A 245 LPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLY-PEDSFRTVEECFGEYIVKMEEKQP 323 (346)
T ss_dssp CCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHS-TTCCCCCHHHHHHHHHCC------
T ss_pred CceEecCHHHHHHHHhcCCChhhhHHHHHHHHhccCCCcccccCCCCcccHHHhC-CCCCcCcHHHHHHHHHHHhhcccc
Confidence 87765432100 0 0 0000 1112234433 788899999999999999998776
Q ss_pred ccc
Q psy7590 355 VAR 357 (358)
Q Consensus 355 ~~~ 357 (358)
..+
T Consensus 324 ~~~ 326 (346)
T 3i6i_A 324 TAD 326 (346)
T ss_dssp ---
T ss_pred ccc
Confidence 443
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=240.54 Aligned_cols=224 Identities=20% Similarity=0.218 Sum_probs=179.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc-cc-c------CCCC---------ceeeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE-EK-R------DDET---------WIFVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~-g~-~------~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
|+++|+||||||||++|++|+++|++. |+ + ...+ ...+.++.+|++|++++.++++ ++|+|
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--~~D~V 95 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE--GVDIC 95 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT--TCSEE
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh--cCCEE
Confidence 566789999999999999999999999 86 3 1100 1245667899999999999998 69999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
||+|+.... .....++...+++|+.++.+++++|.++++++||++||..++. |.+ .|+.+
T Consensus 96 ih~Aa~~~~-~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~------------------p~~-~Y~~s 155 (344)
T 2gn4_A 96 IHAAALKHV-PIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN------------------PIN-LYGAT 155 (344)
T ss_dssp EECCCCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS------------------CCS-HHHHH
T ss_pred EECCCCCCC-CchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC------------------Ccc-HHHHH
Confidence 999997542 1233567789999999999999999999999999999976531 234 79999
Q ss_pred HHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 144 KRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 144 K~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
|..+|.+++.++.. .|++++++||++|||+.. .+++.++.. +..
T Consensus 156 K~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-------~~i~~~~~~----~~~---------------------- 202 (344)
T 2gn4_A 156 KLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-------SVVPFFKKL----VQN---------------------- 202 (344)
T ss_dssp HHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT-------SHHHHHHHH----HHH----------------------
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC-------CHHHHHHHH----HHc----------------------
Confidence 99999999988754 579999999999999863 244544443 334
Q ss_pred CccCCCcccCCccccCCCc-eEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 221 DKLDLIPFSLFPFCFTGGD-EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
|+ ++.+. ++...++|+|++|+|++++.++++... +++|++.++ .+++.|+++.+.+.+
T Consensus 203 -----------------g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~~--g~~~~~~~~-~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 203 -----------------KASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMHG--GEIFVPKIP-SMKMTDLAKALAPNT 261 (344)
T ss_dssp -----------------TCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCCS--SCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred -----------------CCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhccC--CCEEecCCC-cEEHHHHHHHHHHhC
Confidence 66 77765 677789999999999999999998543 348988765 699999999998755
Q ss_pred C
Q psy7590 300 Q 300 (358)
Q Consensus 300 g 300 (358)
+
T Consensus 262 ~ 262 (344)
T 2gn4_A 262 P 262 (344)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-29 Score=232.55 Aligned_cols=227 Identities=18% Similarity=0.166 Sum_probs=178.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 75 (358)
||+||||||||+||++|+++|+++|++ .... ...+.++.+|++|++++.++++ ++|+|||+|+...
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~~a~~~~---- 75 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVK--DCDGIIHLGGVSV---- 75 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHT--TCSEEEECCSCCS----
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHc--CCCEEEECCcCCC----
Confidence 358999999999999999999999873 1111 1234667899999999999998 5999999999753
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC-CCCCccccccCCCCCCCCcchHHHHHHHHHHHHHH
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT-TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~-~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 154 (358)
..+....+++|+.++.++++++.++++++|||+||.++|+... ..+++|++ +..|.+ .|+.+|..+|.+++.+
T Consensus 76 -~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~----~~~~~~-~Y~~sK~~~e~~~~~~ 149 (267)
T 3ay3_A 76 -ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEV----PRRPDS-LYGLSKCFGEDLASLY 149 (267)
T ss_dssp -CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTS----CCCCCS-HHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCC----CCCCCC-hHHHHHHHHHHHHHHH
Confidence 2456788999999999999999999999999999999998643 46789988 667766 7999999999999998
Q ss_pred HhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccc
Q psy7590 155 YQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFC 234 (358)
Q Consensus 155 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (358)
.+..|++++++||+++|+....
T Consensus 150 ~~~~gi~~~~lrp~~v~~~~~~---------------------------------------------------------- 171 (267)
T 3ay3_A 150 YHKFDIETLNIRIGSCFPKPKD---------------------------------------------------------- 171 (267)
T ss_dssp HHTTCCCEEEEEECBCSSSCCS----------------------------------------------------------
T ss_pred HHHcCCCEEEEeceeecCCCCC----------------------------------------------------------
Confidence 8888999999999999842100
Q ss_pred cCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCCCC
Q psy7590 235 FTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADG 314 (358)
Q Consensus 235 ~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~ 314 (358)
+ ...++|+|++|+|++++.+++++... ..+|++.++..
T Consensus 172 ---~---------~~~~~~~~~~dva~~~~~~~~~~~~~-~~~~~~~~~~~----------------------------- 209 (267)
T 3ay3_A 172 ---A---------RMMATWLSVDDFMRLMKRAFVAPKLG-CTVVYGASANT----------------------------- 209 (267)
T ss_dssp ---H---------HHHHHBCCHHHHHHHHHHHHHSSCCC-EEEEEECCSCS-----------------------------
T ss_pred ---C---------CeeeccccHHHHHHHHHHHHhCCCCC-ceeEecCCCcc-----------------------------
Confidence 0 11345799999999999999876432 24677654321
Q ss_pred ccccccchHHHHhhhCCCCccc-cHHHHHHHHHH
Q psy7590 315 QLKKTASNRKLRELRGPGFEFT-PFQQAVQESVA 347 (358)
Q Consensus 315 ~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~ 347 (358)
....+..++ +.| ||+|. +++++++++.+
T Consensus 210 --~~~~d~~~~-~~l--g~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 210 --ESWWDNDKS-AFL--GWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp --SCCBCCGGG-GGG--CCCCCCCGGGGHHHHHH
T ss_pred --ccccCHHHH-HHc--CCCCCCCHHHHHHHHHh
Confidence 123456666 677 99965 88888887764
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.3e-29 Score=227.51 Aligned_cols=215 Identities=15% Similarity=0.153 Sum_probs=173.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC--CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|+||+||||||+|+||++|++.|+++|++ ... ....+..+.+|++|++++.++++ ++|+|||+|+...
T Consensus 1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vi~~Ag~~~-- 76 (267)
T 3rft_A 1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVA--GCDGIVHLGGISV-- 76 (267)
T ss_dssp CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHT--TCSEEEECCSCCS--
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHc--CCCEEEECCCCcC--
Confidence 34678999999999999999999999973 211 12345667899999999999999 6999999999843
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCC-CCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDK-TTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~-~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
..+....+++|+.++.+++++|+++++++|||+||..+|+.. ...+++|+. +..|.+ .|+.+|...|.+++
T Consensus 77 ---~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~----~~~~~~-~Y~~sK~~~e~~~~ 148 (267)
T 3rft_A 77 ---EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDV----PARPDG-LYGVSKCFGENLAR 148 (267)
T ss_dssp ---CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTS----CCCCCS-HHHHHHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCC----CCCCCC-hHHHHHHHHHHHHH
Confidence 356778999999999999999999999999999999999743 346788887 666666 79999999999999
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
.++.++|++++++||+.|+|+...
T Consensus 149 ~~a~~~g~~~~~vr~~~v~~~~~~-------------------------------------------------------- 172 (267)
T 3rft_A 149 MYFDKFGQETALVRIGSCTPEPNN-------------------------------------------------------- 172 (267)
T ss_dssp HHHHHHCCCEEEEEECBCSSSCCS--------------------------------------------------------
T ss_pred HHHHHhCCeEEEEEeecccCCCCC--------------------------------------------------------
Confidence 999889999999999999987422
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCC
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQF 301 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~ 301 (358)
+...++|++++|+++++..+++.+..... ++++.+++..++.++... +.+|.
T Consensus 173 --------------~~~~~~~~~~~d~a~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~--~~~g~ 224 (267)
T 3rft_A 173 --------------YRMLSTWFSHDDFVSLIEAVFRAPVLGCP-VVWGASANDAGWWDNSHL--GFLGW 224 (267)
T ss_dssp --------------TTHHHHBCCHHHHHHHHHHHHHCSCCCSC-EEEECCCCTTCCBCCGGG--GGGCC
T ss_pred --------------CCceeeEEcHHHHHHHHHHHHhCCCCCce-EEEEeCCCCCCcccChhH--HHCCC
Confidence 11234578999999999999988655544 777887776666555332 34454
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=221.99 Aligned_cols=248 Identities=17% Similarity=0.147 Sum_probs=178.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc-ccc------CCC-----CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE-EKR------DDE-----TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~-g~~------~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
|+||||||||+||++|++.|++. |++ ... ....++++.+|++|++++.++++ ++|+|||+|+....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~--~~d~vi~~a~~~~~ 78 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFK--GMDTVVFIPSIIHP 78 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTT--TCSEEEECCCCCCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHh--CCCEEEEeCCCCcc
Confidence 47999999999999999999987 763 111 12346677999999999999999 69999999987531
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
...|+.++++++++|+++++++|||+||.+. . +. .|. .+...+..+|..+
T Consensus 79 -----------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~---~------~~-------~~~--~~~~~~~~~e~~~- 128 (289)
T 3e48_A 79 -----------SFKRIPEVENLVYAAKQSGVAHIIFIGYYAD---Q------HN-------NPF--HMSPYFGYASRLL- 128 (289)
T ss_dssp -----------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCC---S------TT-------CCS--TTHHHHHHHHHHH-
T ss_pred -----------chhhHHHHHHHHHHHHHcCCCEEEEEcccCC---C------CC-------CCC--ccchhHHHHHHHH-
Confidence 1348899999999999999999999999532 1 11 111 2333334455544
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
+.+|++++++||+.++|+.. .++..+. ..
T Consensus 129 ---~~~g~~~~ilrp~~~~~~~~-----------~~~~~~~---~~---------------------------------- 157 (289)
T 3e48_A 129 ---STSGIDYTYVRMAMYMDPLK-----------PYLPELM---NM---------------------------------- 157 (289)
T ss_dssp ---HHHCCEEEEEEECEESTTHH-----------HHHHHHH---HH----------------------------------
T ss_pred ---HHcCCCEEEEeccccccccH-----------HHHHHHH---HC----------------------------------
Confidence 34699999999999998721 1222222 11
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCC-
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNA- 311 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~- 311 (358)
+ . ...+.++..++|+|++|+|++++.++.++... +++||++ ++.+|+.|+++.+.+.+|++.++...+..
T Consensus 158 -----~-~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 228 (289)
T 3e48_A 158 -----H-K-LIYPAGDGRINYITRNDIARGVIAIIKNPDTW-GKRYLLS-GYSYDMKELAAILSEASGTEIKYEPVSLET 228 (289)
T ss_dssp -----T-E-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT-TCEEEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHH
T ss_pred -----C-C-EecCCCCceeeeEEHHHHHHHHHHHHcCCCcC-CceEEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHH
Confidence 2 2 23456778899999999999999999986554 4489999 99999999999999999987655432210
Q ss_pred -------CCCcc-------------ccccchHHHHhhhCCCCccccHHHHHHHHH
Q psy7590 312 -------ADGQL-------------KKTASNRKLRELRGPGFEFTPFQQAVQESV 346 (358)
Q Consensus 312 -------~~~~~-------------~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~ 346 (358)
+.... .....+..+++.+ |++|+++++-+++.-
T Consensus 229 ~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--G~~p~~~~~~~~~~~ 281 (289)
T 3e48_A 229 FAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLV--NDQPQTLQSFLQENI 281 (289)
T ss_dssp HHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHH--SSCCCCHHHHHHC--
T ss_pred HHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHh--CCCCCCHHHHHHHHH
Confidence 00000 1124556778888 999999988776543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7e-28 Score=224.38 Aligned_cols=261 Identities=14% Similarity=0.074 Sum_probs=183.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcc-cc------CCCC-------ceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEE-KR------DDET-------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g-~~------~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|.++|+||||||||++|++++++|+++| ++ .... ...++++.+|++|++++.++++ ++|+|||+
T Consensus 2 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~--~~d~vi~~ 79 (299)
T 2wm3_A 2 MVDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALN--GAYATFIV 79 (299)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEEC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHh--cCCEEEEe
Confidence 5446799999999999999999999988 63 2222 1245677899999999999998 59999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRM 146 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~ 146 (358)
++.... . ..+.|+.++++++++|+++++++|||+||.++|+... ..+.. .|+.+|..
T Consensus 80 a~~~~~-----~----~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~-------------~~~~~-~y~~sK~~ 136 (299)
T 2wm3_A 80 TNYWES-----C----SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA-------------GRLAA-AHFDGKGE 136 (299)
T ss_dssp CCHHHH-----T----CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT-------------TSCCC-HHHHHHHH
T ss_pred CCCCcc-----c----cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC-------------CcccC-chhhHHHH
Confidence 885421 0 1456788999999999999999999988888876321 11223 69999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCC
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
.|.+++. +|++++++||+++||+.... +++ .....
T Consensus 137 ~e~~~~~----~gi~~~ilrp~~~~~~~~~~------~~~-------~~~~~---------------------------- 171 (299)
T 2wm3_A 137 VEEYFRD----IGVPMTSVRLPCYFENLLSH------FLP-------QKAPD---------------------------- 171 (299)
T ss_dssp HHHHHHH----HTCCEEEEECCEEGGGGGTT------TCC-------EECTT----------------------------
T ss_pred HHHHHHH----CCCCEEEEeecHHhhhchhh------cCC-------cccCC----------------------------
Confidence 9999865 58999999999999864210 000 00011
Q ss_pred cccCCccccCCCceEEE-cCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcce
Q psy7590 227 PFSLFPFCFTGGDEFKV-LGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI 305 (358)
Q Consensus 227 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i 305 (358)
|+...+ ...++..++|+|++|+|+++..++.++....+++|++++ +.+|+.|+++.+.+.+|++.++
T Consensus 172 -----------g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~ 239 (299)
T 2wm3_A 172 -----------GKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTRKVVHD 239 (299)
T ss_dssp -----------SSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHHHHHSSCEEE
T ss_pred -----------CCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHHHHHCCCcee
Confidence 322221 234667789999999999999999864221234899986 6899999999999999988654
Q ss_pred eecCCCC----CCcc------------ccccchHHHHhhhCCCCccccHHHHHHHH
Q psy7590 306 TFDTNAA----DGQL------------KKTASNRKLRELRGPGFEFTPFQQAVQES 345 (358)
Q Consensus 306 ~~~~~~~----~~~~------------~~~~~~~k~~~~l~~G~~~~~~~~~l~~~ 345 (358)
...+... .... .-........+.+ |.+|++|++.+++.
T Consensus 240 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~ 293 (299)
T 2wm3_A 240 AKMTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRL--NPKALTLDQWLEQH 293 (299)
T ss_dssp CCCCTHHHHTTCSTTHHHHHHHHHHHTTCCCCCHHHHHHH--CTTCCCHHHHHHHH
T ss_pred EecCHHHHHhcCCCcHHHHHHHHHHHHhcCCCCHHHHHHh--CCCCCCHHHHHHhC
Confidence 4332210 0000 0011123345567 88888888877665
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.7e-28 Score=217.20 Aligned_cols=200 Identities=16% Similarity=0.168 Sum_probs=159.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC---CCceeeecccccCCC-HHHHHHHHhccCCcEEEEcccccCCcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD---ETWIFVSSKEADLSN-LESTQQLFSKYKPTHVIHLAAMVGGLF 74 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~---~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~Vih~a~~~~~~~ 74 (358)
||||||||||++|++|+++|+++|++ .. .....++++.+|++| ++++.++++ ++|+|||+|+...
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~--~~d~vi~~ag~~~--- 75 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLH--GMDAIINVSGSGG--- 75 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTT--TCSEEEECCCCTT---
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHc--CCCEEEECCcCCC---
Confidence 48999999999999999999999983 11 111456777999999 999999998 5999999999754
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHH
Q psy7590 75 HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154 (358)
Q Consensus 75 ~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 154 (358)
...+++|+.++.+++++|++.++++|||+||.++++.. +.+| . ++.|.. .|+.+|..+|++++
T Consensus 76 ------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~----~~~~~~-~Y~~sK~~~e~~~~-- 138 (219)
T 3dqp_A 76 ------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-A----GFDALK-DYYIAKHFADLYLT-- 138 (219)
T ss_dssp ------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-H----HHHHTH-HHHHHHHHHHHHHH--
T ss_pred ------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-c----cccccc-HHHHHHHHHHHHHH--
Confidence 12667789999999999999999999999998776532 3344 2 344555 79999999999986
Q ss_pred HhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccc
Q psy7590 155 YQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFC 234 (358)
Q Consensus 155 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (358)
+..|++++++||+++||+....
T Consensus 139 -~~~~i~~~ilrp~~v~g~~~~~--------------------------------------------------------- 160 (219)
T 3dqp_A 139 -KETNLDYTIIQPGALTEEEATG--------------------------------------------------------- 160 (219)
T ss_dssp -HSCCCEEEEEEECSEECSCCCS---------------------------------------------------------
T ss_pred -hccCCcEEEEeCceEecCCCCC---------------------------------------------------------
Confidence 4579999999999999985321
Q ss_pred cCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHH
Q psy7590 235 FTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEA 294 (358)
Q Consensus 235 ~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~ 294 (358)
.+.+ +...++|++++|+|++++.++.++... +++||++++ ..++.|+.+.
T Consensus 161 -----~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~~-g~~~~i~~g-~~~~~e~~~~ 210 (219)
T 3dqp_A 161 -----LIDI---NDEVSASNTIGDVADTIKELVMTDHSI-GKVISMHNG-KTAIKEALES 210 (219)
T ss_dssp -----EEEE---SSSCCCCEEHHHHHHHHHHHHTCGGGT-TEEEEEEEC-SEEHHHHHHT
T ss_pred -----cccc---CCCcCCcccHHHHHHHHHHHHhCcccc-CcEEEeCCC-CccHHHHHHH
Confidence 1111 245678999999999999999886543 459999876 4999998764
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-27 Score=212.41 Aligned_cols=204 Identities=18% Similarity=0.179 Sum_probs=158.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-----eee-ecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-----IFV-SSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-----~~~-~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
+.|+||||||||+||++|+++|+++|++ ..... ..+ .++.+|++ +++.+++. ++|+|||+|+..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~--~~D~vi~~ag~~ 95 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFA--SIDAVVFAAGSG 95 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGT--TCSEEEECCCCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHc--CCCEEEECCCCC
Confidence 3579999999999999999999999983 21111 134 66789998 77777887 699999999975
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHH
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 150 (358)
. ..+....+++|+.++.+++++|+++++++|||+||.+.+.. +.. + .+.. .|+.+|..+|.+
T Consensus 96 ~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~----~-~~~~-~Y~~sK~~~e~~ 157 (236)
T 3e8x_A 96 P-----HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQG----P-MNMR-HYLVAKRLADDE 157 (236)
T ss_dssp T-----TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGS----C-GGGH-HHHHHHHHHHHH
T ss_pred C-----CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCC----h-hhhh-hHHHHHHHHHHH
Confidence 4 25678899999999999999999999999999999654321 221 1 2233 799999999998
Q ss_pred HHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccC
Q psy7590 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSL 230 (358)
Q Consensus 151 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (358)
++ ..|++++++||+.++|+...
T Consensus 158 ~~----~~gi~~~~lrpg~v~~~~~~------------------------------------------------------ 179 (236)
T 3e8x_A 158 LK----RSSLDYTIVRPGPLSNEEST------------------------------------------------------ 179 (236)
T ss_dssp HH----HSSSEEEEEEECSEECSCCC------------------------------------------------------
T ss_pred HH----HCCCCEEEEeCCcccCCCCC------------------------------------------------------
Confidence 86 47999999999999998532
Q ss_pred CccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 231 FPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 231 ~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
..+.........+++++++|+|++++.++.++.. .+++|+++++ .+++.|+++.++
T Consensus 180 --------~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 180 --------GKVTVSPHFSEITRSITRHDVAKVIAELVDQQHT-IGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp --------SEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGG-TTEEEEEEEC-SEEHHHHHHTC-
T ss_pred --------CeEEeccCCCcccCcEeHHHHHHHHHHHhcCccc-cCCeEEEeCC-CcCHHHHHHHhc
Confidence 1222233444567899999999999999987643 3458999887 699999998765
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=217.28 Aligned_cols=228 Identities=16% Similarity=0.146 Sum_probs=166.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----C--------ceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----T--------WIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----~--------~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
|.+||+||||||||++|++|++.|++.|++ ... + ...++.+.+|++|++++.++++ ++|
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~--~~d 78 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVD 78 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCS
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh--CCC
Confidence 666789999999999999999999999873 211 0 1245677999999999999998 599
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
+|||+++.... . .|+.++.+++++|++++ ++|||+ | +|+.....+ +. +..|....|
T Consensus 79 ~vi~~a~~~~~-----~-------~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~----~~~p~~~~y 135 (313)
T 1qyd_A 79 VVISALAGGVL-----S-------HHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EH----ALQPGSITF 135 (313)
T ss_dssp EEEECCCCSSS-----S-------TTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CC----CCSSTTHHH
T ss_pred EEEECCccccc-----h-------hhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---cc----CCCCCcchH
Confidence 99999997531 1 25778899999999999 999995 3 455322111 11 333433357
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
.+|..+|++++. .|++++++||+.++|..... + .... +
T Consensus 136 -~sK~~~e~~~~~----~g~~~~ilrp~~~~~~~~~~----------~----~~~~----------------------~- 173 (313)
T 1qyd_A 136 -IDKRKVRRAIEA----ASIPYTYVSSNMFAGYFAGS----------L----AQLD----------------------G- 173 (313)
T ss_dssp -HHHHHHHHHHHH----TTCCBCEEECCEEHHHHTTT----------S----SCTT----------------------C-
T ss_pred -HHHHHHHHHHHh----cCCCeEEEEeceeccccccc----------c----cccc----------------------c-
Confidence 999999998853 68999999999888742210 0 0000 0
Q ss_pred CccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCC-CcccHHHHHHHHHHHh
Q psy7590 221 DKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEK-DEVTIAEVAEAIANAF 299 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~-~~~s~~ei~~~i~~~~ 299 (358)
.....++.+.++++++..++|+|++|+|++++.++.++...+ ++|++.++ +.+|+.|+++.+.+.+
T Consensus 174 ------------~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~-~~~~~~g~~~~~s~~e~~~~~~~~~ 240 (313)
T 1qyd_A 174 ------------HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLN-KTMYIRPPMNILSQKEVIQIWERLS 240 (313)
T ss_dssp ------------CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSS-SEEECCCGGGEEEHHHHHHHHHHHH
T ss_pred ------------cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCC-ceEEEeCCCCccCHHHHHHHHHHhc
Confidence 000014456667788889999999999999999998764433 36777654 7899999999999999
Q ss_pred CCCcceeec
Q psy7590 300 QFKGRITFD 308 (358)
Q Consensus 300 g~~~~i~~~ 308 (358)
|++.++...
T Consensus 241 g~~~~~~~~ 249 (313)
T 1qyd_A 241 EQNLDKIYI 249 (313)
T ss_dssp TCCCEECCB
T ss_pred CCCCceEEC
Confidence 988765543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=6.1e-26 Score=205.12 Aligned_cols=225 Identities=18% Similarity=0.147 Sum_probs=162.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHc--ccc------CCCC----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEE--EKR------DDET----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~--g~~------~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
++||+||||||+|+||++|+++|+++ |++ .... ...+.++.+|++|++++.++++ ++|+|||+|+.
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~a~~ 79 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQ--GIDALVILTSA 79 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT--TCSEEEECCCC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHc--CCCEEEEeccc
Confidence 45679999999999999999999999 663 1110 1234566899999999999998 59999999996
Q ss_pred cCCc------------cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 70 VGGL------------FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 70 ~~~~------------~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
.... ..........+++|+.++.++++++++.++++|||+||.+++.... +.. +....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~--~~~--------~~~~~ 149 (253)
T 1xq6_A 80 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH--PLN--------KLGNG 149 (253)
T ss_dssp CCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC--GGG--------GGGGC
T ss_pred cccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCC--ccc--------cccch
Confidence 5311 0111222356899999999999999999999999999998753211 100 00112
Q ss_pred cchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANS 217 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (358)
.|+.+|..+|.+++. .|++++++||+.+||+...... .+.. .
T Consensus 150 -~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~----~~~~----------~------------------- 191 (253)
T 1xq6_A 150 -NILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRE----LLVG----------K------------------- 191 (253)
T ss_dssp -CHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSC----EEEE----------S-------------------
T ss_pred -hHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhh----hhcc----------C-------------------
Confidence 588899999998854 6899999999999998643110 0000 0
Q ss_pred CCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCC---cccHHHHHHH
Q psy7590 218 FGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKD---EVTIAEVAEA 294 (358)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~---~~s~~ei~~~ 294 (358)
..+ +++. ..+++|++|+|++++.+++++.. .+++||+++++ .+|+.|+++.
T Consensus 192 --------------------~~~--~~~~---~~~~~~~~Dva~~~~~~~~~~~~-~g~~~~i~~~~~~~~~s~~e~~~~ 245 (253)
T 1xq6_A 192 --------------------DDE--LLQT---DTKTVPRADVAEVCIQALLFEEA-KNKAFDLGSKPEGTSTPTKDFKAL 245 (253)
T ss_dssp --------------------TTG--GGGS---SCCEEEHHHHHHHHHHHTTCGGG-TTEEEEEEECCTTTSCCCCCHHHH
T ss_pred --------------------CcC--CcCC---CCcEEcHHHHHHHHHHHHcCccc-cCCEEEecCCCcCCCCCHHHHHHH
Confidence 001 1111 23589999999999999987543 34589999864 5999999999
Q ss_pred HHHHhCCC
Q psy7590 295 IANAFQFK 302 (358)
Q Consensus 295 i~~~~g~~ 302 (358)
+.+.+|++
T Consensus 246 ~~~~~g~~ 253 (253)
T 1xq6_A 246 FSQVTSRF 253 (253)
T ss_dssp HHTCCCCC
T ss_pred HHHHhCCC
Confidence 99998863
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=204.79 Aligned_cols=208 Identities=15% Similarity=0.121 Sum_probs=133.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCc----eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETW----IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLF 74 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~ 74 (358)
||||||||||+||++|+++|+++|++ ..... ..++++.+|++|+++ +++. ++|+|||+|+....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~ag~~~~-- 74 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTL--SDLS--DQNVVVDAYGISPD-- 74 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCH--HHHT--TCSEEEECCCSSTT--
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhh--hhhc--CCCEEEECCcCCcc--
Confidence 48999999999999999999999983 21111 345677999999987 6776 59999999997431
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecccee-cCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHH
Q psy7590 75 HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIF-PDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA 153 (358)
Q Consensus 75 ~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy-~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~ 153 (358)
..+.|+.+++++++++++++++++|++||.++| +.....+..|+. +..|.. .|+.+|...|.+ ..
T Consensus 75 --------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~----~~~~~~-~y~~~k~~~e~~-~~ 140 (221)
T 3ew7_A 75 --------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESK----GLREAP-YYPTARAQAKQL-EH 140 (221)
T ss_dssp --------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-----------------------CC-CSCCHHHHHHHH-HH
T ss_pred --------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccC----CCCCHH-HHHHHHHHHHHH-HH
Confidence 145589999999999999998999999999655 443334556665 555665 699999999987 33
Q ss_pred HHh-hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 154 YYQ-QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 154 ~~~-~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
+.+ ..|++++++||+++||+..... .+. ..
T Consensus 141 ~~~~~~gi~~~ivrp~~v~g~~~~~~------------~~~---~~---------------------------------- 171 (221)
T 3ew7_A 141 LKSHQAEFSWTYISPSAMFEPGERTG------------DYQ---IG---------------------------------- 171 (221)
T ss_dssp HHTTTTTSCEEEEECSSCCCCC----------------------------------------------------------
T ss_pred HHhhccCccEEEEeCcceecCCCccC------------ceE---ec----------------------------------
Confidence 333 6799999999999999832210 000 00
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHH
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAE 290 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~e 290 (358)
+..+.+.+++. ++++++|+|++++.+++++...+ ++||++++.+.+.+|
T Consensus 172 -----~~~~~~~~~~~---~~i~~~Dva~~~~~~l~~~~~~g-~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 172 -----KDHLLFGSDGN---SFISMEDYAIAVLDEIERPNHLN-EHFTVAGKLEHHHHH 220 (221)
T ss_dssp --------------------CCCHHHHHHHHHHHHHSCSCTT-SEEECCC--------
T ss_pred -----cccceecCCCC---ceEeHHHHHHHHHHHHhCccccC-CEEEECCCCcccccc
Confidence 23333333332 57999999999999999876544 489999887766554
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.8e-26 Score=202.75 Aligned_cols=207 Identities=14% Similarity=0.094 Sum_probs=147.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
||||||||||+||++|+++|+++|++ .... ...++++.+|++|+++ +++. ++|+|||+|+....
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~--~~d~vi~~ag~~~~- 75 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLD--SVDAVVDALSVPWG- 75 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHT--TCSEEEECCCCCTT-
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcc--cCCEEEECCccCCC-
Confidence 47999999999999999999999983 1110 1245667899999887 6776 59999999997521
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceec-CCCC--CCCccccccCCCCCCCCcchHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP-DKTT--YPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~-~~~~--~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 150 (358)
......|+.++++++++|++++ ++||++||.+++. .... .+.+|.. .+.|.+ .|+.+|...|.
T Consensus 76 -------~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~----~~~~~~-~y~~sK~~~e~- 141 (224)
T 3h2s_A 76 -------SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPE----SAASQP-WYDGALYQYYE- 141 (224)
T ss_dssp -------SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCG----GGGGST-THHHHHHHHHH-
T ss_pred -------cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCC----CCccch-hhHHHHHHHHH-
Confidence 1124679999999999999999 8999999985543 3322 2344444 444455 79999999994
Q ss_pred HHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccC
Q psy7590 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSL 230 (358)
Q Consensus 151 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (358)
+..+.+..+++++++||+.+||+..... +. ..
T Consensus 142 ~~~~~~~~~i~~~ivrp~~v~g~~~~~~-----~~-----------~~-------------------------------- 173 (224)
T 3h2s_A 142 YQFLQMNANVNWIGISPSEAFPSGPATS-----YV-----------AG-------------------------------- 173 (224)
T ss_dssp HHHHTTCTTSCEEEEEECSBCCCCCCCC-----EE-----------EE--------------------------------
T ss_pred HHHHHhcCCCcEEEEcCccccCCCcccC-----ce-----------ec--------------------------------
Confidence 4555566799999999999999843210 00 00
Q ss_pred CccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHH
Q psy7590 231 FPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289 (358)
Q Consensus 231 ~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ 289 (358)
...+.. +...+++++++|+|++++.+++++...+ ++|++++....++.
T Consensus 174 -------~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~~g-~~~~~~~~~~~~~~ 221 (224)
T 3h2s_A 174 -------KDTLLV---GEDGQSHITTGNMALAILDQLEHPTAIR-DRIVVRDADLEHHH 221 (224)
T ss_dssp -------SSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCCTT-SEEEEEECC-----
T ss_pred -------cccccc---CCCCCceEeHHHHHHHHHHHhcCccccC-CEEEEecCcchhcc
Confidence 112111 2234578999999999999999876544 48999886655543
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-26 Score=212.21 Aligned_cols=222 Identities=16% Similarity=0.186 Sum_probs=164.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------------ceeeecccccCCCHHHHHHHHhccCC
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------------WIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
|.+||+||||||||++|++|++.|+++|++ .... ...++++.+|++|++++.++++ ++
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~ 78 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK--NV 78 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc--CC
Confidence 655789999999999999999999999873 2110 1246677999999999999999 59
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+|||+++... +.++.+++++|++++ ++|||+ | +|+.. .+|.. +..|....
T Consensus 79 d~vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~----~~~p~~~~ 130 (308)
T 1qyc_A 79 DVVISTVGSLQ----------------IESQVNIIKAIKEVGTVKRFFP-S---EFGND----VDNVH----AVEPAKSV 130 (308)
T ss_dssp SEEEECCCGGG----------------SGGGHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCC----CCTTHHHH
T ss_pred CEEEECCcchh----------------hhhHHHHHHHHHhcCCCceEee-c---ccccC----ccccc----cCCcchhH
Confidence 99999998642 346688999999998 999984 4 34422 12322 33342335
Q ss_pred hHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
| .+|...|++++. .+++++++||+.++|...... .... ....
T Consensus 131 y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~----------~~~~-~~~~---------------------- 172 (308)
T 1qyc_A 131 F-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSL----------AQAG-LTAP---------------------- 172 (308)
T ss_dssp H-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTT----------TCTT-CSSC----------------------
T ss_pred H-HHHHHHHHHHHh----cCCCeEEEEeceecccccccc----------cccc-ccCC----------------------
Confidence 7 999999998864 589999999998887532110 0000 0000
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccC-CCcccHHHHHHHHHHH
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE-KDEVTIAEVAEAIANA 298 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~-~~~~s~~ei~~~i~~~ 298 (358)
.++.+.++++++..++|+|++|+|++++.++.++... +++|++.+ ++.+|+.|+++.+.+.
T Consensus 173 -----------------~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~g~~~~~s~~e~~~~~~~~ 234 (308)
T 1qyc_A 173 -----------------PRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTL-NKTLYLRLPANTLSLNELVALWEKK 234 (308)
T ss_dssp -----------------CSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGT-TEEEECCCGGGEEEHHHHHHHHHHH
T ss_pred -----------------CCCceEEecCCCceEEEecHHHHHHHHHHHHhCcccc-CeEEEEeCCCCccCHHHHHHHHHHH
Confidence 1456777888888999999999999999999875433 34777765 4789999999999999
Q ss_pred hCCCcceeec
Q psy7590 299 FQFKGRITFD 308 (358)
Q Consensus 299 ~g~~~~i~~~ 308 (358)
+|++.++...
T Consensus 235 ~g~~~~~~~~ 244 (308)
T 1qyc_A 235 IDKTLEKAYV 244 (308)
T ss_dssp TTSCCEEEEE
T ss_pred hCCCCceEeC
Confidence 9998776544
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-25 Score=210.44 Aligned_cols=222 Identities=12% Similarity=0.113 Sum_probs=164.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc--------eeeeccccc-CCCHHHHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW--------IFVSSKEAD-LSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~--------~~~~~~~~D-l~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
+|+||||||||++|++|++.|+++|++ ..... ..+..+.+| ++|++++.++++ ++|+|||+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~--~~d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHh--cCCEEEEcCC
Confidence 578999999999999999999998873 22221 145667899 999999999998 5999999987
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccc--eecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTC--IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~--vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
... . ..|..+ ++++++|++++ +++|||+||.+ .|+. .+.. .|+.+|.
T Consensus 83 ~~~------~------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~----------------~~~~-~y~~sK~ 132 (352)
T 1xgk_A 83 SQA------G------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP----------------WPAV-PMWAPKF 132 (352)
T ss_dssp STT------S------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS----------------CCCC-TTTHHHH
T ss_pred CCC------c------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC----------------CCCc-cHHHHHH
Confidence 431 1 236666 99999999999 99999999985 3321 1223 6999999
Q ss_pred HHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCC
Q psy7590 146 MLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDL 225 (358)
Q Consensus 146 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (358)
.+|++++. .+++++++||+ +||+...... .+ + +..
T Consensus 133 ~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~-----~~-~----~~~------------------------------ 167 (352)
T 1xgk_A 133 TVENYVRQ----LGLPSTFVYAG-IYNNNFTSLP-----YP-L----FQM------------------------------ 167 (352)
T ss_dssp HHHHHHHT----SSSCEEEEEEC-EEGGGCBSSS-----CS-S----CBE------------------------------
T ss_pred HHHHHHHH----cCCCEEEEecc-eecCCchhcc-----cc-c----ccc------------------------------
Confidence 99999865 48999999976 6887643110 00 0 000
Q ss_pred CcccCCccccCCCce-EEEcCCCCceeeeeeH-HHHHHHHHHHHHhcCC-CCCceEEccCCCcccHHHHHHHHHHHhCCC
Q psy7590 226 IPFSLFPFCFTGGDE-FKVLGTGKPLRQFIYS-LDLARLFIWVLREYDS-VEPIILSVDEKDEVTIAEVAEAIANAFQFK 302 (358)
Q Consensus 226 ~~~~~~~~~~~~g~~-~~~~~~~~~~~~~i~v-~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~ 302 (358)
.....|.. +.++++++..++|+|+ +|+|++++.++.++.. ..+++||+++ +.+|+.|+++.+.+.+|++
T Consensus 168 -------~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~ 239 (352)
T 1xgk_A 168 -------ELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRR 239 (352)
T ss_dssp -------EECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSC
T ss_pred -------cccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHHHHHHHHHCCC
Confidence 00011333 3456777888999999 8999999999987421 1234899995 6899999999999999998
Q ss_pred cceeecCC
Q psy7590 303 GRITFDTN 310 (358)
Q Consensus 303 ~~i~~~~~ 310 (358)
.++...+.
T Consensus 240 ~~~~~vp~ 247 (352)
T 1xgk_A 240 VTYVQVPK 247 (352)
T ss_dssp EEEEECSS
T ss_pred CceEECCH
Confidence 77665553
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=211.47 Aligned_cols=215 Identities=20% Similarity=0.170 Sum_probs=161.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-C--------ceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-T--------WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-~--------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
++||||||||++|++|++.|+++|++ ... . ...++++.+|++|++++.++++ ++|+|||+++.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~--~~d~vi~~a~~ 89 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK--KVDVVISALAF 89 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEEEECCCG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc--CCCEEEECCch
Confidence 38999999999999999999999873 221 1 1246678999999999999999 59999999986
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLD 148 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E 148 (358)
.. +.++++++++|++++ +++||+ | +|+.. .+|.. +..|....| .+|...|
T Consensus 90 ~~----------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~----~~~p~~~~y-~sK~~~e 140 (318)
T 2r6j_A 90 PQ----------------ILDQFKILEAIKVAGNIKRFLP-S---DFGVE----EDRIN----ALPPFEALI-ERKRMIR 140 (318)
T ss_dssp GG----------------STTHHHHHHHHHHHCCCCEEEC-S---CCSSC----TTTCC----CCHHHHHHH-HHHHHHH
T ss_pred hh----------------hHHHHHHHHHHHhcCCCCEEEe-e---ccccC----ccccc----CCCCcchhH-HHHHHHH
Confidence 42 446788999999998 999984 3 35432 12222 223322257 9999999
Q ss_pred HHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcc
Q psy7590 149 VLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPF 228 (358)
Q Consensus 149 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (358)
++++. .+++++++||+.+++. ++..+......
T Consensus 141 ~~~~~----~~~~~~~lr~~~~~~~--------------~~~~~~~~~~~------------------------------ 172 (318)
T 2r6j_A 141 RAIEE----ANIPYTYVSANCFASY--------------FINYLLRPYDP------------------------------ 172 (318)
T ss_dssp HHHHH----TTCCBEEEECCEEHHH--------------HHHHHHCTTCC------------------------------
T ss_pred HHHHh----cCCCeEEEEcceehhh--------------hhhhhccccCC------------------------------
Confidence 88854 6899999999877643 22223221112
Q ss_pred cCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccC-CCcccHHHHHHHHHHHhCCCcceee
Q psy7590 229 SLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE-KDEVTIAEVAEAIANAFQFKGRITF 307 (358)
Q Consensus 229 ~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~-~~~~s~~ei~~~i~~~~g~~~~i~~ 307 (358)
+..+.++++++..++|+|++|+|++++.++.++... +++|++.+ ++.+|+.|+++.+.+.+|++.++..
T Consensus 173 ---------~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~ 242 (318)
T 2r6j_A 173 ---------KDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRAL-NRVVIYRPSTNIITQLELISRWEKKIGKKFKKIH 242 (318)
T ss_dssp ---------CSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGT-TEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEE
T ss_pred ---------CCceEEecCCCceeeEeeHHHHHHHHHHHhcCcccc-CeEEEecCCCCccCHHHHHHHHHHHhCCCCceee
Confidence 556777888888999999999999999999875433 34677764 4789999999999999999877654
Q ss_pred c
Q psy7590 308 D 308 (358)
Q Consensus 308 ~ 308 (358)
.
T Consensus 243 ~ 243 (318)
T 2r6j_A 243 V 243 (318)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-26 Score=204.30 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=150.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc--c------CCC-CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK--R------DDE-TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLF 74 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~--~------~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~ 74 (358)
+|+||||||||++|++|+++|+++|+ + ... ....+..+.+|+++++++.+++ +|+|||+|+...
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~----~d~vi~~a~~~~--- 77 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGS----IDTAFCCLGTTI--- 77 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCSC----CSEEEECCCCCH---
T ss_pred CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcccCCCceEEeccccCHHHHHHhh----hcEEEECeeecc---
Confidence 36899999999999999999999986 3 111 1234566789999888777666 899999999753
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHH
Q psy7590 75 HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154 (358)
Q Consensus 75 ~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 154 (358)
....+....+++|+.++.+++++|++.++++|||+||.++|+. |.+ .|+.+|...|.+++.
T Consensus 78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-----------------~~~-~y~~sK~~~e~~~~~- 138 (215)
T 2a35_A 78 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-----------------SSI-FYNRVKGELEQALQE- 138 (215)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-----------------CSS-HHHHHHHHHHHHHTT-
T ss_pred ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-----------------Ccc-HHHHHHHHHHHHHHH-
Confidence 2245678899999999999999999999999999999988753 223 799999999999865
Q ss_pred HhhcCce-EEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCcc
Q psy7590 155 YQQHGVT-YTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPF 233 (358)
Q Consensus 155 ~~~~g~~-~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (358)
.+++ ++++||+.+||+..... ++..+. .
T Consensus 139 ---~~~~~~~~vrp~~v~g~~~~~~---------~~~~~~----~----------------------------------- 167 (215)
T 2a35_A 139 ---QGWPQLTIARPSLLFGPREEFR---------LAEILA----A----------------------------------- 167 (215)
T ss_dssp ---SCCSEEEEEECCSEESTTSCEE---------GGGGTT----C-----------------------------------
T ss_pred ---cCCCeEEEEeCceeeCCCCcch---------HHHHHH----H-----------------------------------
Confidence 5898 99999999999975421 111110 0
Q ss_pred ccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHH
Q psy7590 234 CFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289 (358)
Q Consensus 234 ~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ 289 (358)
. ...+ .++ .++++|++|+|++++.+++++. +++||+++++.+++.
T Consensus 168 ----~-~~~~-~~~--~~~~i~~~Dva~~~~~~~~~~~---~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 168 ----P-IARI-LPG--KYHGIEACDLARALWRLALEEG---KGVRFVESDELRKLG 212 (215)
T ss_dssp ----C-CC-----C--HHHHHHHHHHHHHHHHHHTCCC---SEEEEEEHHHHHHHH
T ss_pred ----h-hhhc-cCC--CcCcEeHHHHHHHHHHHHhcCC---CCceEEcHHHHHHhh
Confidence 1 1111 122 5689999999999999998764 348999877665553
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=203.25 Aligned_cols=220 Identities=19% Similarity=0.183 Sum_probs=162.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-------CC--------ceeeecccccCCCHHHHHHHHhccCCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-------ET--------WIFVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-------~~--------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
||+||||||||++|++|++.|++.|++ .. .+ ...++++.+|++|++++.++++ ++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~--~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK--QVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh--CCCE
Confidence 468999999999999999999999873 22 00 1245677899999999999999 5999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
|||+++... +.++.+++++|++++ ++|||+ | +|+.. .+|.. +..|....|
T Consensus 80 vi~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~----~~~p~~~~y- 130 (307)
T 2gas_A 80 VICAAGRLL----------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLD----VDRHD----AVEPVRQVF- 130 (307)
T ss_dssp EEECSSSSC----------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCC----CCTTHHHHH-
T ss_pred EEECCcccc----------------cccHHHHHHHHHhcCCceEEee-c---ccccC----ccccc----CCCcchhHH-
Confidence 999998642 446788999999998 999983 3 35432 12222 333422368
Q ss_pred HHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCC
Q psy7590 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLD 221 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (358)
.+|...|.+++. .+++++++||+.+++..... +.... ....
T Consensus 131 ~sK~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~----------~~~~~-~~~~------------------------ 171 (307)
T 2gas_A 131 EEKASIRRVIEA----EGVPYTYLCCHAFTGYFLRN----------LAQLD-ATDP------------------------ 171 (307)
T ss_dssp HHHHHHHHHHHH----HTCCBEEEECCEETTTTGGG----------TTCTT-CSSC------------------------
T ss_pred HHHHHHHHHHHH----cCCCeEEEEcceeecccccc----------ccccc-cccC------------------------
Confidence 999999988854 58999999999888753210 00000 0000
Q ss_pred ccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccC-CCcccHHHHHHHHHHHhC
Q psy7590 222 KLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE-KDEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~-~~~~s~~ei~~~i~~~~g 300 (358)
.+..+.++++++..++|+|++|+|++++.++.++... +++|++.+ ++.+|+.|+++.+.+.+|
T Consensus 172 ---------------~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-~~~~~~~~~~~~~s~~e~~~~~~~~~g 235 (307)
T 2gas_A 172 ---------------PRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTL-NKAVHIRLPKNYLTQNEVIALWEKKIG 235 (307)
T ss_dssp ---------------CSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGT-TEEEECCCGGGEEEHHHHHHHHHHHHT
T ss_pred ---------------CCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcccc-CceEEEeCCCCcCCHHHHHHHHHHHhC
Confidence 1446677788888999999999999999999875433 34677765 478999999999999999
Q ss_pred CCcceeecC
Q psy7590 301 FKGRITFDT 309 (358)
Q Consensus 301 ~~~~i~~~~ 309 (358)
++.++...+
T Consensus 236 ~~~~~~~~~ 244 (307)
T 2gas_A 236 KTLEKTYVS 244 (307)
T ss_dssp SCCEEEEEC
T ss_pred CCCceeecC
Confidence 987766443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-25 Score=206.27 Aligned_cols=219 Identities=17% Similarity=0.156 Sum_probs=162.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-C-------------CceeeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-E-------------TWIFVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
||+||||||||++|++|++.|+++|++ .. . ....++++.+|++|++++.++++ ++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~--~~d~v 81 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK--QVDIV 81 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT--TCSEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc--CCCEE
Confidence 468999999999999999999999873 22 1 01246677999999999999999 59999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
||+++... +.++.+++++|++++ +++||+ | +|+.. .+|.. +..|....| .
T Consensus 82 i~~a~~~~----------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~----~~~p~~~~y-~ 132 (321)
T 3c1o_A 82 ISALPFPM----------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCE----EDRIK----PLPPFESVL-E 132 (321)
T ss_dssp EECCCGGG----------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSC----GGGCC----CCHHHHHHH-H
T ss_pred EECCCccc----------------hhhHHHHHHHHHHhCCccEEec-c---ccccC----ccccc----cCCCcchHH-H
Confidence 99998642 456789999999999 999983 3 45432 12322 333322268 9
Q ss_pred HHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCc
Q psy7590 143 AKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (358)
+|...|.+++. .+++++++||+.+++. ++..+.....
T Consensus 133 sK~~~e~~~~~----~~~~~~~lrp~~~~~~--------------~~~~~~~~~~------------------------- 169 (321)
T 3c1o_A 133 KKRIIRRAIEA----AALPYTYVSANCFGAY--------------FVNYLLHPSP------------------------- 169 (321)
T ss_dssp HHHHHHHHHHH----HTCCBEEEECCEEHHH--------------HHHHHHCCCS-------------------------
T ss_pred HHHHHHHHHHH----cCCCeEEEEeceeccc--------------cccccccccc-------------------------
Confidence 99999998854 5899999999888764 2222221000
Q ss_pred cCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccC-CCcccHHHHHHHHHHHhCC
Q psy7590 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE-KDEVTIAEVAEAIANAFQF 301 (358)
Q Consensus 223 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~-~~~~s~~ei~~~i~~~~g~ 301 (358)
....+..+.++++++..++|+|++|+|++++.++.++... +++|++.+ ++.+|+.|+++.+.+.+|+
T Consensus 170 -----------~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~-g~~~~~~g~~~~~t~~e~~~~~~~~~g~ 237 (321)
T 3c1o_A 170 -----------HPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCC-NRIVIYRPPKNIISQNELISLWEAKSGL 237 (321)
T ss_dssp -----------SCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGGT-TEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred -----------cccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcccc-CeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence 0001445667788888999999999999999999876443 34777875 4799999999999999999
Q ss_pred Ccceeec
Q psy7590 302 KGRITFD 308 (358)
Q Consensus 302 ~~~i~~~ 308 (358)
+.++...
T Consensus 238 ~~~~~~~ 244 (321)
T 3c1o_A 238 SFKKVHM 244 (321)
T ss_dssp CCCEEEE
T ss_pred cceeeeC
Confidence 8776644
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=7e-24 Score=185.78 Aligned_cols=194 Identities=18% Similarity=0.178 Sum_probs=143.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
|++ |+||||||||++|++|+++|+++|++ .... ...+.++.+|++|++++.++++ ++|+|||+|+.
T Consensus 1 M~~-~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~vi~~a~~ 77 (206)
T 1hdo_A 1 MAV-KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA--GQDAVIVLLGT 77 (206)
T ss_dssp CCC-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT--TCSEEEECCCC
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHc--CCCEEEECccC
Confidence 554 69999999999999999999999873 1111 2345667899999999999998 59999999997
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
... .++ .+.|+.++.++++++++.++++|||+||.++|+.....+ .+.. .|+.+|...|.
T Consensus 78 ~~~-----~~~---~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~-----------~~~~-~y~~~K~~~e~ 137 (206)
T 1hdo_A 78 RND-----LSP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVP-----------PRLQ-AVTDDHIRMHK 137 (206)
T ss_dssp TTC-----CSC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSC-----------GGGH-HHHHHHHHHHH
T ss_pred CCC-----CCc---cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccccc-----------ccch-hHHHHHHHHHH
Confidence 542 111 248899999999999999999999999999987542211 1223 79999999999
Q ss_pred HHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCccc
Q psy7590 150 LNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229 (358)
Q Consensus 150 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (358)
+++ ..+++++++||+.+ ++..... .+.
T Consensus 138 ~~~----~~~i~~~~lrp~~~-~~~~~~~----~~~-------------------------------------------- 164 (206)
T 1hdo_A 138 VLR----ESGLKYVAVMPPHI-GDQPLTG----AYT-------------------------------------------- 164 (206)
T ss_dssp HHH----HTCSEEEEECCSEE-ECCCCCS----CCE--------------------------------------------
T ss_pred HHH----hCCCCEEEEeCCcc-cCCCCCc----ceE--------------------------------------------
Confidence 984 36899999999997 4332110 000
Q ss_pred CCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCC
Q psy7590 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKD 284 (358)
Q Consensus 230 ~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~ 284 (358)
....... ..+++|++|+|++++.+++++.. .+++|+++++.
T Consensus 165 ------------~~~~~~~-~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~i~~g~ 205 (206)
T 1hdo_A 165 ------------VTLDGRG-PSRVISKHDLGHFMLRCLTTDEY-DGHSTYPSHQY 205 (206)
T ss_dssp ------------EESSSCS-SCSEEEHHHHHHHHHHTTSCSTT-TTCEEEEECCC
T ss_pred ------------ecccCCC-CCCccCHHHHHHHHHHHhcCccc-cccceeeeccc
Confidence 0000000 03689999999999999988643 34589998764
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.1e-24 Score=192.53 Aligned_cols=225 Identities=14% Similarity=0.107 Sum_probs=156.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc--CCcEEEEcccccCCccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY--KPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vih~a~~~~~~~~ 75 (358)
||+||||||+|+||++++++|+++|++ ....... .+.+|+++++++.++++.. ++|+|||+|+...
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~---- 74 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV---- 74 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT----
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--cccCCcccHHHHHHHHHHcCCCccEEEECCCCCC----
Confidence 458999999999999999999999874 2222211 2689999999999998744 7999999999754
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCC-CCc-------cccccC---CCCCCCCcch
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTY-PID-------ETMVHN---GPPHPSNFGY 140 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~-~~~-------E~~~~~---~~~~p~~~~Y 140 (358)
...+....+++|+.++.++++++... +.+++|++||..+|+..... +.. |+.+.. ....+.. .|
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y 153 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHL-AY 153 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHH-HH
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcch-hH
Confidence 13567889999999999999988765 56799999999988643211 111 111000 0012223 79
Q ss_pred HHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANS 217 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (358)
+.+|...|.+++.++.+ .|++++++||+.++|+.. ..+......
T Consensus 154 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~--------------~~~~~~~~~------------------- 200 (255)
T 2dkn_A 154 AGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLL--------------QASKADPRY------------------- 200 (255)
T ss_dssp HHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHH--------------HHHHHCTTT-------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhh--------------hhcccchhh-------------------
Confidence 99999999999988766 589999999999998731 111110000
Q ss_pred CCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccHHH
Q psy7590 218 FGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTIAE 290 (358)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~~e 290 (358)
+....... + +.++|++++|+|++++.++..... ..+++|+++++..+++.|
T Consensus 201 --------------------~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 201 --------------------GESTRRFV-A-PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp --------------------HHHHHSCC-C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred --------------------HHHHHHHH-H-HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 00000000 1 334689999999999999987532 234589999887776644
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.89 E-value=8.2e-23 Score=184.02 Aligned_cols=145 Identities=15% Similarity=0.156 Sum_probs=119.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccc--c------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEK--R------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~--~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
++|+||||||+|+||++|+++|+++|+ + .... ...+..+.+|++|++++.++++ ++|+|||+|+.
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vi~~ag~ 94 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQ--GHDVGFCCLGT 94 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGS--SCSEEEECCCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhc--CCCEEEECCCc
Confidence 357899999999999999999999997 4 1111 1235567899999999999998 69999999997
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
... ..+....+++|+.++.++++++++.++++||++||.++|+.. .. .|+.+|...|.
T Consensus 95 ~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-----------------~~-~Y~~sK~~~e~ 152 (242)
T 2bka_A 95 TRG----KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS-----------------NF-LYLQVKGEVEA 152 (242)
T ss_dssp CHH----HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-----------------SS-HHHHHHHHHHH
T ss_pred ccc----cCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCC-----------------cc-hHHHHHHHHHH
Confidence 531 134567899999999999999999999999999999887521 23 79999999999
Q ss_pred HHHHHHhhcCc-eEEEEecCcccCCCC
Q psy7590 150 LNKAYYQQHGV-TYTSVIPCNVFGPHD 175 (358)
Q Consensus 150 ~~~~~~~~~g~-~~~ilRp~~v~G~~~ 175 (358)
+++. .++ +++++||+.+||+..
T Consensus 153 ~~~~----~~~~~~~~vrpg~v~~~~~ 175 (242)
T 2bka_A 153 KVEE----LKFDRYSVFRPGVLLCDRQ 175 (242)
T ss_dssp HHHT----TCCSEEEEEECCEEECTTG
T ss_pred HHHh----cCCCCeEEEcCceecCCCC
Confidence 8865 477 699999999999964
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-22 Score=177.78 Aligned_cols=190 Identities=12% Similarity=0.040 Sum_probs=129.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc------CCC-----CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR------DDE-----TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~------~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
||+||||||||+||++|++.|+++| ++ ... ....+..+.+|++|++++.++++ ++|+|||+++...
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQ--GQDIVYANLTGED 100 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHT--TCSEEEEECCSTT
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhc--CCCEEEEcCCCCc
Confidence 5689999999999999999999999 63 111 11245667999999999999999 5999999988532
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCC--CccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYP--IDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~--~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
. ...+++++++++++++++||++||.++|+...... ..+.. .. .+...+..+|+
T Consensus 101 ~---------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~ 156 (236)
T 3qvo_A 101 L---------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAV----IG-----EPLKPFRRAAD 156 (236)
T ss_dssp H---------------HHHHHHHHHHHHHTTCCEEEEECCCCC--------------------C-----GGGHHHHHHHH
T ss_pred h---------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhc----cc-----chHHHHHHHHH
Confidence 0 13567899999999999999999999998653322 22222 11 23334444555
Q ss_pred HHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCccc
Q psy7590 150 LNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229 (358)
Q Consensus 150 ~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (358)
.+ +..|++++++||+.++++.....
T Consensus 157 ~l----~~~gi~~~~vrPg~i~~~~~~~~--------------------------------------------------- 181 (236)
T 3qvo_A 157 AI----EASGLEYTILRPAWLTDEDIIDY--------------------------------------------------- 181 (236)
T ss_dssp HH----HTSCSEEEEEEECEEECCSCCCC---------------------------------------------------
T ss_pred HH----HHCCCCEEEEeCCcccCCCCcce---------------------------------------------------
Confidence 54 35699999999999998743210
Q ss_pred CCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCc
Q psy7590 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDE 285 (358)
Q Consensus 230 ~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~ 285 (358)
.. ..........+++.+|+|++++.++..+....+++|+++++..
T Consensus 182 ----------~~-~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 182 ----------EL-TSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT 226 (236)
T ss_dssp ----------EE-ECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred ----------EE-eccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence 00 0000111234799999999999999987644456899987653
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.4e-22 Score=183.17 Aligned_cols=236 Identities=15% Similarity=0.054 Sum_probs=163.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
++|+||||||+|+||++++++|+++|++ .... ...+.++.+|++|++++.++++.. ++|+|
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 3568999999999999999999999984 1111 013455689999999999888754 79999
Q ss_pred EEcccccCCc---cccccchhhHHHHHHHH----HHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGL---FHNMSHNLDFFRVNMKI----NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~---~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+|+..... ....++....+++|+.+ ++.+++.+++.+..++|++||...+.. ..+.
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---------------~~~~ 148 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS---------------FAGF 148 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC---------------CTTC
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC---------------CCCc
Confidence 9999975321 12234456789999999 666666667777789999999866432 1122
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCc-ccchhHHHHHHHHhhhhcCccchhhcccCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLES-SHVIPGLIRKLYDTIEKGKDQSVFESRARFP 212 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (358)
..|+.+|...|.+.+.++.+ .|+++++++|+.+.++........ ....+.+.......
T Consensus 149 -~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----------------- 210 (281)
T 3m1a_A 149 -SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPT----------------- 210 (281)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHH-----------------
T ss_pred -hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHH-----------------
Confidence 37999999999999998877 699999999999988753321110 11122222221110
Q ss_pred CCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHH
Q psy7590 213 PGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVA 292 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~ 292 (358)
.++ ....+...+.+++|+|++++.+++++... ..|+++++....+.+.+
T Consensus 211 --------------------------~~~---~~~~~~~~~~~~~dva~a~~~~~~~~~~~--~~~~l~s~~~~~i~g~~ 259 (281)
T 3m1a_A 211 --------------------------RQL---VQGSDGSQPGDPAKAAAAIRLALDTEKTP--LRLALGGDAVDFLTGHL 259 (281)
T ss_dssp --------------------------HHH---HHC-----CBCHHHHHHHHHHHHHSSSCC--SEEEESHHHHHHHHHHH
T ss_pred --------------------------HHH---HhhccCCCCCCHHHHHHHHHHHHhCCCCC--eEEecCchHHHHHHHHH
Confidence 000 01122345688999999999999986543 37999988777888888
Q ss_pred HHHHHHhCCC
Q psy7590 293 EAIANAFQFK 302 (358)
Q Consensus 293 ~~i~~~~g~~ 302 (358)
..+.+.++..
T Consensus 260 ~~i~~~~~~~ 269 (281)
T 3m1a_A 260 DSVRAELTEW 269 (281)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 8888776543
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9e-21 Score=174.27 Aligned_cols=228 Identities=16% Similarity=0.148 Sum_probs=164.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.++||||||+|+||++++++|+++|++ .... ...+.++.+|++|++++.++++.. ++|+
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 95 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 95 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999999999999999999999974 1000 003556689999999999888742 6999
Q ss_pred EEEcccccCCc-----cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 63 VIHLAAMVGGL-----FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 63 Vih~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|||+|+..... ....++....+++|+.++.++++++... +..++|++||..+|... +
T Consensus 96 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------~- 161 (278)
T 2bgk_A 96 MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-------------E- 161 (278)
T ss_dssp EEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC-------------T-
T ss_pred EEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCC-------------C-
Confidence 99999975321 1122345678999999999999998763 56799999999877532 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRAR 210 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (358)
.+.. .|+.+|...|.+++.++.+ .|++++++||+.++++....... ..+.+...+..
T Consensus 162 ~~~~-~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~~---------------- 221 (278)
T 2bgk_A 162 GVSH-VYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFG---VDSSRVEELAH---------------- 221 (278)
T ss_dssp TSCH-HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSS---CCHHHHHHHHH----------------
T ss_pred CCCc-chHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcc---cchhHHHHhhh----------------
Confidence 1222 7999999999999888765 58999999999999986432110 01222222211
Q ss_pred CCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccHH
Q psy7590 211 FPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTIA 289 (358)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~~ 289 (358)
.. +.....+++++|+|++++.++..... ..+++|++.++..+++.
T Consensus 222 ---------------------------~~-------~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~ 267 (278)
T 2bgk_A 222 ---------------------------QA-------ANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP 267 (278)
T ss_dssp ---------------------------HT-------CSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred ---------------------------cc-------cccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCC
Confidence 00 11123478999999999999975432 33458999999999999
Q ss_pred HHHHHHHHHh
Q psy7590 290 EVAEAIANAF 299 (358)
Q Consensus 290 ei~~~i~~~~ 299 (358)
|+++.+.+.+
T Consensus 268 e~~~~i~~~~ 277 (278)
T 2bgk_A 268 AFPTALKHGL 277 (278)
T ss_dssp HHHHHSCSCC
T ss_pred ccchhhhhhc
Confidence 9998876543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-21 Score=170.32 Aligned_cols=140 Identities=10% Similarity=0.121 Sum_probs=109.1
Q ss_pred CEEEEEcCCChhHHHHHHHHH-Hcccc------CCC--------CceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVK-EEEKR------DDE--------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~-~~g~~------~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
++||||||||+||+++++.|+ +.|++ ... ....+..+.+|++|++++.++++ ++|+|||+|+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~d~vv~~ag~ 83 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT--NAEVVFVGAME 83 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT--TCSEEEESCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc--CCCEEEEcCCC
Confidence 469999999999999999999 78873 222 22345667899999999999998 69999999985
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
. |+. ++++++++++.++++||++||.++|+.... ...+.. ...... .|+.+|...|.
T Consensus 84 ~----------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~-~~~~~~----~~~~~~-~y~~~K~~~e~ 140 (221)
T 3r6d_A 84 S----------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPV-ALEKWT----FDNLPI-SYVQGERQARN 140 (221)
T ss_dssp C----------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCH-HHHHHH----HHTSCH-HHHHHHHHHHH
T ss_pred C----------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCc-cccccc----cccccc-HHHHHHHHHHH
Confidence 2 344 899999999999999999999998875321 111111 001111 59999999999
Q ss_pred HHHHHHhhcCceEEEEecCcccCC
Q psy7590 150 LNKAYYQQHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 150 ~~~~~~~~~g~~~~ilRp~~v~G~ 173 (358)
+++. .+++++++||+.++++
T Consensus 141 ~~~~----~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 141 VLRE----SNLNYTILRLTWLYND 160 (221)
T ss_dssp HHHH----SCSEEEEEEECEEECC
T ss_pred HHHh----CCCCEEEEechhhcCC
Confidence 8854 6999999999999987
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=170.55 Aligned_cols=212 Identities=14% Similarity=0.108 Sum_probs=153.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.|+||||||+|+||++++++|+++|++ .... ...+.++.+|++|++++.++++.. ++|
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 90 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD 90 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999974 1000 113445689999999999888632 699
Q ss_pred EEEEcccccCCc--cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 62 HVIHLAAMVGGL--FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 62 ~Vih~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
+|||+|+..... ....++....+++|+.++.++++++. +.+.+++|++||...+... .+
T Consensus 91 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------~~ 155 (255)
T 1fmc_A 91 ILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN---------------IN 155 (255)
T ss_dssp EEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC---------------TT
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC---------------CC
Confidence 999999975421 11234456789999999999999885 4567799999999776421 12
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFP 212 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (358)
.. .|+.+|...|.+++.++.+. |++++++||+.++++.... ...+.+...+. .
T Consensus 156 ~~-~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~-----~~~~~~~~~~~----~-------------- 211 (255)
T 1fmc_A 156 MT-SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-----VITPEIEQKML----Q-------------- 211 (255)
T ss_dssp CH-HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT-----TCCHHHHHHHH----H--------------
T ss_pred Cc-ccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhh-----ccChHHHHHHH----h--------------
Confidence 23 79999999999999887664 8999999999999874221 11222332222 1
Q ss_pred CCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccH
Q psy7590 213 PGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTI 288 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~ 288 (358)
+.+ ...+++++|+|++++.++..... ..+++|+++++...|+
T Consensus 212 -------------------------~~~---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 212 -------------------------HTP---------IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp -------------------------TCS---------SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred -------------------------cCC---------cccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 222 12367899999999999976433 2345899999887764
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=172.46 Aligned_cols=211 Identities=20% Similarity=0.194 Sum_probs=150.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------ceeeecccccCCCHHHHHHHHhcc-CCcEEEEccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------WIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAA 68 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~ 68 (358)
+.|+||||||+|+||++++++|+++|++ .... ...++.+.+|++|++++.++++.. ++|+|||+|+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 3468999999999999999999999984 1100 012345589999999999999854 4899999999
Q ss_pred ccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 69 MVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 69 ~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
..... ....++....+++|+.++.++++++... + ..+||++||..+|... +....|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------~~~~~Y 149 (244)
T 1cyd_A 86 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF----------------PNLITY 149 (244)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------------TTBHHH
T ss_pred ccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC----------------CCcchh
Confidence 65321 1122345678999999999999888764 4 5699999999876432 122379
Q ss_pred HHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANS 217 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (358)
+.+|...|.+++.++.+ .|++++++||+.++++..... ...+.++..+. +
T Consensus 150 ~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~----~~~~~~~~~~~----~------------------- 202 (244)
T 1cyd_A 150 SSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKV----SADPEFARKLK----E------------------- 202 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHH----TCCHHHHHHHH----H-------------------
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccc----ccCHHHHHHHH----h-------------------
Confidence 99999999999988776 589999999999998742100 00122222221 1
Q ss_pred CCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCc
Q psy7590 218 FGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDE 285 (358)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~ 285 (358)
+. +.++|++++|+|++++.++..... ..++++++.++..
T Consensus 203 --------------------~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 203 --------------------RH---------PLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYL 242 (244)
T ss_dssp --------------------HS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred --------------------cC---------CccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCCcc
Confidence 11 124689999999999999976432 2345788877654
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-20 Score=169.19 Aligned_cols=158 Identities=16% Similarity=0.175 Sum_probs=123.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC--CCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD--ETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~ 70 (358)
.++||||||+|+||+++++.|+++|++ .. .....+..+.+|++|++++.++++.. ++|++||+||..
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 107 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVF 107 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC
Confidence 468999999999999999999999984 11 11223556789999999999888753 699999999975
Q ss_pred CCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 71 GGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 71 ~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
... ....++....+++|+.++.++++++ ++.+..++|++||...+... +..+.. .|+.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------------~~~~~~-~Y~~s 173 (260)
T 3un1_A 108 LAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM-------------VGMPSA-LASLT 173 (260)
T ss_dssp CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB-------------TTCCCH-HHHHH
T ss_pred CCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC-------------CCCccH-HHHHH
Confidence 421 1123445678899999999999988 45667799999998764321 122223 79999
Q ss_pred HHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 144 KRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 144 K~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
|...+.+.+.++.+. |+++.+++|+.++++..
T Consensus 174 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 208 (260)
T 3un1_A 174 KGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMH 208 (260)
T ss_dssp HHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTS
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCC
Confidence 999999999988876 89999999999998853
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.84 E-value=6e-21 Score=167.27 Aligned_cols=152 Identities=11% Similarity=0.089 Sum_probs=115.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccccCCccc---cccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMVGGLFH---NMSH 79 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~~~~~~---~~~~ 79 (358)
+|+||||||+|+||++++++|+ +|++-.........+.+|+++++++.++++.. ++|+|||+|+....... ..++
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~ 81 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEK 81 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSSEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHH
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHH
Confidence 4589999999999999999999 88740000000014589999999999998864 58999999996532111 1233
Q ss_pred hhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy7590 80 NLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156 (358)
Q Consensus 80 ~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~ 156 (358)
....+++|+.++.++++++... + .++|++||...+.. . +....|+.+|...|.+++.++.
T Consensus 82 ~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~---------------~-~~~~~Y~~sK~~~~~~~~~~~~ 144 (202)
T 3d7l_A 82 NAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDP---------------I-VQGASAAMANGAVTAFAKSAAI 144 (202)
T ss_dssp HHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSC---------------C-TTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCC---------------C-CccHHHHHHHHHHHHHHHHHHH
Confidence 4567789999999999999876 4 58999999866432 1 1223799999999999999876
Q ss_pred hc--CceEEEEecCcccCC
Q psy7590 157 QH--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 157 ~~--g~~~~ilRp~~v~G~ 173 (358)
+. |++++++||+.++++
T Consensus 145 e~~~gi~v~~v~pg~v~~~ 163 (202)
T 3d7l_A 145 EMPRGIRINTVSPNVLEES 163 (202)
T ss_dssp SCSTTCEEEEEEECCBGGG
T ss_pred HccCCeEEEEEecCccCCc
Confidence 54 899999999999876
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=9.2e-20 Score=167.88 Aligned_cols=230 Identities=16% Similarity=0.142 Sum_probs=146.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C--------------CCCceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D--------------DETWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~--------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
.++||||||+|+||+++++.|+++|++ . ......+..+.+|++|++++.++++..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFG 85 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999983 1 111123456689999999998888742
Q ss_pred CCcEEEEcccccCCcc---c----cccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccce-ecCCCCCCCccc
Q psy7590 59 KPTHVIHLAAMVGGLF---H----NMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCI-FPDKTTYPIDET 126 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~---~----~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~v-y~~~~~~~~~E~ 126 (358)
++|+|||+|+...... . ..++....+++|+.++.++++++... + .++|++||... +...
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~-------- 156 (278)
T 1spx_A 86 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT-------- 156 (278)
T ss_dssp CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC--------
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC--------
Confidence 6999999999753210 1 33445678999999999999988764 5 79999999865 4321
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccc
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQS 203 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (358)
|....|+.+|...+.+.+.++.+ .|+++++++|+.+.++..............+.. .......
T Consensus 157 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~----- 222 (278)
T 1spx_A 157 --------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYS-TMATMKE----- 222 (278)
T ss_dssp --------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HH-HHHHHHH-----
T ss_pred --------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhH-HHHHHHh-----
Confidence 12237999999999999887754 589999999999988753211000000000000 0110000
Q ss_pred hhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC--CCCceEEcc
Q psy7590 204 VFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS--VEPIILSVD 281 (358)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~v~n~~ 281 (358)
.. +...+.+.+|+|++++.++..+.. ..++++++.
T Consensus 223 ----------------------------------~~---------p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vd 259 (278)
T 1spx_A 223 ----------------------------------CV---------PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVD 259 (278)
T ss_dssp ----------------------------------HC---------TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEES
T ss_pred ----------------------------------cC---------CCcCCCCHHHHHHHHHHHcCccccCcccCcEEEEC
Confidence 00 112368999999999999875432 234589999
Q ss_pred CCCcccHHHHHHHHHHHh
Q psy7590 282 EKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 282 ~~~~~s~~ei~~~i~~~~ 299 (358)
++..+++.++++.+.+.+
T Consensus 260 gG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 260 GGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp TTGGGC------------
T ss_pred CCcccccCcccccHHHHh
Confidence 999999999999988754
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.4e-19 Score=161.34 Aligned_cols=210 Identities=16% Similarity=0.173 Sum_probs=152.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CC-C-----------CceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DD-E-----------TWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~-~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
|++.|++|||||+|+||+++++.|+++|++ .. . ....+..+.+|++|++++.++++..
T Consensus 1 Ml~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 1 MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CCCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 777789999999999999999999999974 01 0 0112345689999999999888753
Q ss_pred -CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 -KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|++||+|+...... ...++....+++|+.++.++++++ ++.+..++|++||...+...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 148 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN------------ 148 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC------------
Confidence 7999999999754211 123345678999999999999999 55566799999998654321
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhc
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (358)
|....|+.+|...+.+.+.++.+ .|+++.+++|+.+.++.... ..+.+...+. .
T Consensus 149 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~------~~~~~~~~~~----~--------- 205 (246)
T 3osu_A 149 ----PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA------LSDELKEQML----T--------- 205 (246)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC------SCHHHHHHHH----T---------
T ss_pred ----CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc------cCHHHHHHHH----h---------
Confidence 12237999999999998888773 58999999999999875432 1222332222 1
Q ss_pred ccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCC
Q psy7590 208 RARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKD 284 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~ 284 (358)
+.+ ...+.+.+|+|+++++++..... ..++++++.+|.
T Consensus 206 ------------------------------~~p---------~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 206 ------------------------------QIP---------LARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp ------------------------------TCT---------TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred ------------------------------cCC---------CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 211 23357889999999998876533 234689998764
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-20 Score=173.03 Aligned_cols=228 Identities=15% Similarity=0.105 Sum_probs=160.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+|+||+++++.|+++|++ .... ...+.++.+|++|++++.++++.. ++
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 105 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHP 105 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999974 1100 123556689999999999888753 68
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh-----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK-----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~-----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|+|||+|+..... ....++....+++|+.++.++++++.. .+..++|++||.+.+...
T Consensus 106 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------- 171 (302)
T 1w6u_A 106 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-------------- 171 (302)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC--------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC--------------
Confidence 9999999964311 122345567899999999999888854 345699999998765321
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhccc
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRA 209 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (358)
.+ ...|+.+|...|.+++.++.. .|++++++||+.++++.......... .....+. .
T Consensus 172 -~~-~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~~----~----------- 231 (302)
T 1w6u_A 172 -GF-VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTG---TFEKEMI----G----------- 231 (302)
T ss_dssp -TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTS---HHHHHHH----T-----------
T ss_pred -CC-cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccch---hhHHHHH----h-----------
Confidence 12 227999999999999998777 68999999999999874221100000 0111111 1
Q ss_pred CCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccH
Q psy7590 210 RFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTI 288 (358)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~ 288 (358)
+.+ ...+.+++|+|++++.++..... ..+++|++.++..+++
T Consensus 232 ----------------------------~~p---------~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~ 274 (302)
T 1w6u_A 232 ----------------------------RIP---------CGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLI 274 (302)
T ss_dssp ----------------------------TCT---------TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHH
T ss_pred ----------------------------cCC---------cCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeecc
Confidence 111 12367899999999999875432 2345899999988999
Q ss_pred HHHHHHHHHHhCCC
Q psy7590 289 AEVAEAIANAFQFK 302 (358)
Q Consensus 289 ~ei~~~i~~~~g~~ 302 (358)
.++++.+.+..|..
T Consensus 275 ~~~~~~~~~~~g~~ 288 (302)
T 1w6u_A 275 SGEFNDLRKVTKEQ 288 (302)
T ss_dssp HSTTGGGGGCCHHH
T ss_pred CCccccchhhcccc
Confidence 88888887776643
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-19 Score=164.15 Aligned_cols=214 Identities=18% Similarity=0.159 Sum_probs=145.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC---------CC--c-------eeeecccccCCCHHHHHHHHhcc-
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD---------ET--W-------IFVSSKEADLSNLESTQQLFSKY- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~---------~~--~-------~~~~~~~~Dl~~~~~~~~~~~~~- 58 (358)
.++||||||+|+||+++++.|+++|++ .. .. . ..+.++.+|++|++++.++++..
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQ 86 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHH
Confidence 468999999999999999999999973 10 00 0 23456689999999998888753
Q ss_pred ----CC-cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCcc
Q psy7590 59 ----KP-THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDE 125 (358)
Q Consensus 59 ----~~-d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E 125 (358)
++ |+|||+|+..... ....++....+++|+.++.++++++... + ..++|++||...+...
T Consensus 87 ~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 159 (264)
T 2pd6_A 87 ACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN------- 159 (264)
T ss_dssp HHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC-------
T ss_pred HHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC-------
Confidence 34 9999999975421 1123456678999999999999998764 3 4689999998544211
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCcc
Q psy7590 126 TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQ 202 (358)
Q Consensus 126 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (358)
+....|+.+|...|.+.+.++.+ .|++++++||+.++++.... +...+......
T Consensus 160 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------~~~~~~~~~~~---- 216 (264)
T 2pd6_A 160 ---------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK----------VPQKVVDKITE---- 216 (264)
T ss_dssp ---------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------------CTGG----
T ss_pred ---------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh----------cCHHHHHHHHH----
Confidence 11237999999999999888776 68999999999999885321 11111111110
Q ss_pred chhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcC-CCCCceEEcc
Q psy7590 203 SVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYD-SVEPIILSVD 281 (358)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~v~n~~ 281 (358)
+. +...+++++|+|++++.++.... ...++++++.
T Consensus 217 -----------------------------------~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~ 252 (264)
T 2pd6_A 217 -----------------------------------MI---------PMGHLGDPEDVADVVAFLASEDSGYITGTSVEVT 252 (264)
T ss_dssp -----------------------------------GC---------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEES
T ss_pred -----------------------------------hC---------CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEEC
Confidence 11 11236789999999999987543 2234589998
Q ss_pred CCCcccHHHH
Q psy7590 282 EKDEVTIAEV 291 (358)
Q Consensus 282 ~~~~~s~~ei 291 (358)
++..++.+..
T Consensus 253 gg~~~~~~~~ 262 (264)
T 2pd6_A 253 GGLFMAENLY 262 (264)
T ss_dssp TTC-------
T ss_pred CCceeccccC
Confidence 8877665544
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-19 Score=162.15 Aligned_cols=208 Identities=17% Similarity=0.100 Sum_probs=148.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc----CCcEEEEcccccCCcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY----KPTHVIHLAAMVGGLF 74 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~Vih~a~~~~~~~ 74 (358)
|+||||||+|+||++++++|+++|++ ... ...+.++.+|++|++++.++++.. ++|+|||+|+......
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~ 81 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEK 81 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCccc
Confidence 58999999999999999999999974 222 333456689999999999888743 6899999999754211
Q ss_pred c---ccc----chhhHHHHHHHHHHHHHHHHHhcC----------CCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 75 H---NMS----HNLDFFRVNMKINDNVLDTSYKQG----------VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 75 ~---~~~----~~~~~~~~nv~~~~~ll~aa~~~~----------v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
. ... +....+++|+.++.++++++...- ..++|++||...+... .+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------~~~- 145 (242)
T 1uay_A 82 ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ---------------IGQ- 145 (242)
T ss_dssp SBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC---------------TTC-
T ss_pred ccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC---------------CCC-
Confidence 1 111 456789999999999999997642 1289999999776532 112
Q ss_pred cchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPG 214 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (358)
..|+.+|...|.+.+.++.+. |++++++||+.++++.... ..+.+...+ ..
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~------~~~~~~~~~----~~---------------- 199 (242)
T 1uay_A 146 AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG------LPEKAKASL----AA---------------- 199 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT------SCHHHHHHH----HT----------------
T ss_pred chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc------cchhHHHHH----Hh----------------
Confidence 279999999999988877653 8999999999998874221 111111111 11
Q ss_pred CCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCccc
Q psy7590 215 ANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVT 287 (358)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s 287 (358)
+.++ ...+++++|+|++++.++.. ....+++|++.++..++
T Consensus 200 -----------------------~~~~--------~~~~~~~~dva~~~~~l~~~-~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 200 -----------------------QVPF--------PPRLGRPEEYAALVLHILEN-PMLNGEVVRLDGALRMA 240 (242)
T ss_dssp -----------------------TCCS--------SCSCCCHHHHHHHHHHHHHC-TTCCSCEEEESTTCCCC
T ss_pred -----------------------hCCC--------cccCCCHHHHHHHHHHHhcC-CCCCCcEEEEcCCeecC
Confidence 1111 02368899999999999987 33344589998876543
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.83 E-value=9.4e-21 Score=166.44 Aligned_cols=152 Identities=18% Similarity=0.129 Sum_probs=117.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-----cCCCCcee------eecccccCCCHHHHHHHHhc-cCCcEEEEcccccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-----RDDETWIF------VSSKEADLSNLESTQQLFSK-YKPTHVIHLAAMVGG 72 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-----~~~~~~~~------~~~~~~Dl~~~~~~~~~~~~-~~~d~Vih~a~~~~~ 72 (358)
|+||||||+|+||++++++|+++ . |....... ..++.+|++|++++.++++. .++|+|||+|+....
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~~ 79 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKAGR 79 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCCC
Confidence 48999999999999999999987 3 11110000 05568999999999999873 259999999997532
Q ss_pred c---cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 73 L---FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 73 ~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
. ....++....+++|+.++.++++++.+.+.++||++||..+|... .+. ..|+.+|...|.
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~---------------~~~-~~Y~~sK~a~~~ 143 (207)
T 2yut_A 80 ASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV---------------PGF-AAYAAAKGALEA 143 (207)
T ss_dssp BCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS---------------TTB-HHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC---------------CCc-chHHHHHHHHHH
Confidence 1 113345677899999999999999977777899999999876421 122 379999999999
Q ss_pred HHHHHHhh---cCceEEEEecCcccCC
Q psy7590 150 LNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 150 ~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+++.++.+ .|++++++||+.++++
T Consensus 144 ~~~~~~~~~~~~gi~v~~v~pg~v~t~ 170 (207)
T 2yut_A 144 YLEAARKELLREGVHLVLVRLPAVATG 170 (207)
T ss_dssp HHHHHHHHHHTTTCEEEEECCCCBCSG
T ss_pred HHHHHHHHHhhhCCEEEEEecCcccCC
Confidence 99988776 5899999999999876
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=162.91 Aligned_cols=155 Identities=19% Similarity=0.190 Sum_probs=119.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------ceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------WIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~ 69 (358)
.++||||||+|+||++++++|+++|++ .... ...++.+.+|++|++++.++++.. ++|+|||+|+.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag~ 86 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAV 86 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCcc
Confidence 368999999999999999999999974 1100 012345589999999999999754 58999999997
Q ss_pred cCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 70 VGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 70 ~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
..... ...+.....+++|+.++.++++++... + ..++|++||...+... +....|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------------~~~~~Y~ 150 (244)
T 3d3w_A 87 ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV----------------TNHSVYC 150 (244)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------------TTBHHHH
T ss_pred CCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC----------------CCCchHH
Confidence 53211 122345678999999999998888763 4 5799999998765321 1223799
Q ss_pred HHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 142 HAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+|...|.+++.++.+ .|+++++++|+.++++.
T Consensus 151 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 186 (244)
T 3d3w_A 151 STKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence 9999999999988766 48999999999999874
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.3e-19 Score=160.33 Aligned_cols=158 Identities=19% Similarity=0.166 Sum_probs=120.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|+||++++++|+++|++ .... ...+.++.+|++|++++.++++.. ++|
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 92 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVD 92 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999974 1100 123556689999999999888642 699
Q ss_pred EEEEcccccC-Cc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVG-GL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~-~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+... .. ....++....+++|+.++.++++++.. .+..++|++||.+.+... +.
T Consensus 93 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------~~ 159 (260)
T 3awd_A 93 ILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN-------------RP 159 (260)
T ss_dssp EEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------------SS
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC-------------CC
Confidence 9999999653 11 012233467899999999999998865 356799999998664321 22
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
.+.. .|+.+|...|.+++.++.+ .|++++++||+.++++..
T Consensus 160 ~~~~-~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~ 203 (260)
T 3awd_A 160 QQQA-AYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLT 203 (260)
T ss_dssp SCCH-HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred CCcc-ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchh
Confidence 2223 7999999999999988776 689999999999998853
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=163.16 Aligned_cols=156 Identities=18% Similarity=0.138 Sum_probs=111.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc------cCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK------YKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~------~~~ 60 (358)
.|+||||||+|+||++++++|+++|++ .... ...+..+.+|+++++++.++++. .++
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~i 93 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKL 93 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999973 1100 11345568999999999888853 369
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+..... ....++....+++|+.++.++++++ ++.+.+++|++||...+...
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------- 158 (266)
T 1xq1_A 94 DILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA--------------- 158 (266)
T ss_dssp SEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-----------------------
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC---------------
Confidence 9999999974321 1123445678999999999999998 45667899999998765321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
.+.. .|+.+|...|.+.+.++.+. |++++++||+.++++..
T Consensus 159 ~~~~-~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 202 (266)
T 1xq1_A 159 SVGS-IYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA 202 (266)
T ss_dssp --CC-HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----
T ss_pred CCCc-hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchh
Confidence 1122 79999999999999887764 89999999999998853
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=167.93 Aligned_cols=228 Identities=16% Similarity=0.120 Sum_probs=162.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C--------------CCCceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D--------------DETWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~--------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
.++||||||+|+||+++++.|+++|++ . ......+.++.+|++|++++.++++..
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHG 90 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999984 0 111114566789999999999888753
Q ss_pred CCcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 KPTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|++||+|+..... ..+.++....+++|+.++.++++++... +-.++|++||...+...
T Consensus 91 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 158 (281)
T 3svt_A 91 RLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH------------ 158 (281)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC------------
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC------------
Confidence 699999999973211 1222345678999999999999988664 33489999999776322
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhc
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (358)
.+.. .|+.||...+.+.+.++.+. |+.+.+++|+.+.++...... ..+.+...+. .
T Consensus 159 ---~~~~-~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~----~--------- 217 (281)
T 3svt_A 159 ---RWFG-AYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAIT----ESAELSSDYA----M--------- 217 (281)
T ss_dssp ---TTCT-HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH----TCHHHHHHHH----H---------
T ss_pred ---CCCh-hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcc----cCHHHHHHHH----h---------
Confidence 1122 79999999999999887764 699999999999876421000 0011111111 1
Q ss_pred ccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcc
Q psy7590 208 RARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEV 286 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~ 286 (358)
.. +...+.+++|+|+++++++..... ..++++++.++..+
T Consensus 218 ------------------------------~~---------p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~ 258 (281)
T 3svt_A 218 ------------------------------CT---------PLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQML 258 (281)
T ss_dssp ------------------------------HC---------SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ------------------------------cC---------CCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhc
Confidence 11 122357899999999999976433 24468999988887
Q ss_pred c-HHHHHHHHHHHhCCCc
Q psy7590 287 T-IAEVAEAIANAFQFKG 303 (358)
Q Consensus 287 s-~~ei~~~i~~~~g~~~ 303 (358)
+ ..++++.+.+.+|.+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 259 RRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp SCCCCCHHHHHHHHCTTG
T ss_pred ccCCcchhccccccCCcc
Confidence 7 7888888888888653
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.82 E-value=7.1e-20 Score=167.12 Aligned_cols=221 Identities=16% Similarity=0.160 Sum_probs=151.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|+||||||+|+||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|+||
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 87 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILV 87 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 368999999999999999999999984 1000 012345689999999999888753 699999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
|+|+...... ...++....+++|+.++.++++++... + -.++|++||...+... |.
T Consensus 88 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~ 151 (259)
T 4e6p_A 88 NNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE----------------AL 151 (259)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC----------------TT
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC----------------CC
Confidence 9999754211 123445678899999999999988654 2 3489999998765321 22
Q ss_pred CcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPP 213 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (358)
...|+.+|...|.+.+.++.+. |+++.+++|+.++++.... ...++..+... ..
T Consensus 152 ~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-------~~~~~~~~~~~-~~--------------- 208 (259)
T 4e6p_A 152 VAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG-------VDALFARYENR-PR--------------- 208 (259)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH-------HHHHHHHHHTC-CT---------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh-------hhhhhhhhccC-Ch---------------
Confidence 2379999999999999887764 8999999999999874210 00111111000 00
Q ss_pred CCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCccc
Q psy7590 214 GANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVT 287 (358)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s 287 (358)
+.......+..+.+.+.+++|+|+++++++..... ..+++|++.++..+|
T Consensus 209 ------------------------~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 209 ------------------------GEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp ------------------------THHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred ------------------------HHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhcC
Confidence 11111122233445688999999999998865433 334689999886653
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.6e-19 Score=160.63 Aligned_cols=157 Identities=16% Similarity=0.094 Sum_probs=117.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc--------eee-ecccccCCCHHHHHHHHhc----cCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW--------IFV-SSKEADLSNLESTQQLFSK----YKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~--------~~~-~~~~~Dl~~~~~~~~~~~~----~~~d~Vi 64 (358)
.++||||||+|+||++++++|+++|++ ..... ..+ ..+.+|++|++++.++++. .++|+||
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li 90 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSILV 90 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEEE
Confidence 358999999999999999999999974 11100 112 5568999999999888754 2699999
Q ss_pred EcccccCCccc---cccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+|+....... ..+.....+++|+.++.++++++ ++.+.+++|++||...+... +..|..
T Consensus 91 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------~~~~~~ 157 (254)
T 2wsb_A 91 NSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN-------------RPQFAS 157 (254)
T ss_dssp ECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------------SSSCBH
T ss_pred ECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC-------------CCCcch
Confidence 99997542111 12234568889999977666655 45567899999999765432 222223
Q ss_pred cchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.|+.+|...|.+++.++.+. |++++++||+.++++.
T Consensus 158 -~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~ 196 (254)
T 2wsb_A 158 -SYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM 196 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence 79999999999998887764 8999999999998873
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=5e-19 Score=161.19 Aligned_cols=156 Identities=18% Similarity=0.144 Sum_probs=117.3
Q ss_pred CCC--CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCce------eeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 1 MAE--EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWI------FVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 1 m~~--~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~------~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
||. .|+||||||+|+||+++++.|+++|++ ...... . ..+.+|++|++++.++++.. ++|
T Consensus 1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD 79 (256)
T 2d1y_A 1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVD 79 (256)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 654 368999999999999999999999974 211100 1 45689999999998888643 699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+|+...... ...++....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------------- 143 (256)
T 2d1y_A 80 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE---------------- 143 (256)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC----------------
Confidence 9999999754211 11234467899999999999988754 456799999998654211
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...|.+.+.++.+. |+++.+++|+.+..+
T Consensus 144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 185 (256)
T 2d1y_A 144 QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 185 (256)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCc
Confidence 222379999999999998887653 899999999988654
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=161.71 Aligned_cols=208 Identities=19% Similarity=0.209 Sum_probs=147.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C-CCCc-----------eeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D-DETW-----------IFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~-~~~~-----------~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+|+||++++++|+++|++ . .... ..+.++.+|++|++++.++++.. ++
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGI 86 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999974 2 2221 24566789999999999888743 69
Q ss_pred cEEEEcccc-cCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----C--C---CEEEEeeccceecCCCCCCCcccc
Q psy7590 61 THVIHLAAM-VGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G--V---KKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 61 d~Vih~a~~-~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~--v---~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
|+|||+|+. .... ....+.....+++|+.++.++++++... + . .++|++||...+...
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 157 (258)
T 3afn_B 87 DVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG--------- 157 (258)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC---------
T ss_pred CEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC---------
Confidence 999999996 3210 0122335668899999999998877532 2 2 589999998765311
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccch
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSV 204 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (358)
.|....|+.+|...|.+++.++... |++++++||+.++++.... ..+.+...+. .
T Consensus 158 ------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~------~~~~~~~~~~----~------ 215 (258)
T 3afn_B 158 ------GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD------KTQDVRDRIS----N------ 215 (258)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT------CCHHHHHHHH----T------
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc------cCHHHHHHHh----c------
Confidence 1122379999999999998887654 8999999999999875332 1122322221 1
Q ss_pred hhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC--CCCceEEccC
Q psy7590 205 FESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS--VEPIILSVDE 282 (358)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~--~~~~v~n~~~ 282 (358)
+. +...+++++|+|++++.++..... ..+++|++.+
T Consensus 216 ---------------------------------~~---------~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~g 253 (258)
T 3afn_B 216 ---------------------------------GI---------PMGRFGTAEEMAPAFLFFASHLASGYITGQVLDING 253 (258)
T ss_dssp ---------------------------------TC---------TTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEEST
T ss_pred ---------------------------------cC---------CCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECC
Confidence 21 123478999999999999976432 2345899987
Q ss_pred CC
Q psy7590 283 KD 284 (358)
Q Consensus 283 ~~ 284 (358)
+.
T Consensus 254 g~ 255 (258)
T 3afn_B 254 GQ 255 (258)
T ss_dssp TS
T ss_pred Cc
Confidence 64
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=2e-18 Score=156.03 Aligned_cols=155 Identities=17% Similarity=0.132 Sum_probs=118.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C------------CCCceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D------------DETWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
|+||||||+|+||++++++|+++|++ . ......+.++.+|++|++++.++++.. ++|
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAID 82 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 58999999999999999999999973 1 111123556789999999999888742 699
Q ss_pred EEEEcccccCCcc------ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 62 HVIHLAAMVGGLF------HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 62 ~Vih~a~~~~~~~------~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
+|||+|+...... ...++....+++|+.++.++++++. +.+.+++|++||...+...
T Consensus 83 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------- 149 (250)
T 2cfc_A 83 VLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF------------- 149 (250)
T ss_dssp EEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------------
T ss_pred EEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-------------
Confidence 9999999754211 1223456788999999977666654 4567899999998765321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
+....|+.+|...|.+.+.++.+. |++++++||+.++++..
T Consensus 150 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~ 193 (250)
T 2cfc_A 150 ---PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMT 193 (250)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTT
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCcc
Confidence 122379999999999999887764 89999999999998853
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.8e-19 Score=157.81 Aligned_cols=154 Identities=19% Similarity=0.171 Sum_probs=109.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
+.|+||||||+|+||++++++|+++|++ .... ...+.++.+|++|++++.++++.. +
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4578999999999999999999999973 1110 113456689999999999888743 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeecc-ceecCCCCCCCccccccCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLST-CIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~-~vy~~~~~~~~~E~~~~~~ 131 (358)
+|+|||+|+..... ....++....+++|+.++.++++++.. .+..++|++||. +.|+..
T Consensus 84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------- 150 (247)
T 2hq1_A 84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA------------- 150 (247)
T ss_dssp CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC-------------
Confidence 99999999975321 123345678999999998888887764 466799999998 444321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...|.+.+.++.+. |+++++++|+.+.++
T Consensus 151 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (247)
T 2hq1_A 151 ----GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTD 191 (247)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred ----CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEecc
Confidence 12279999999999998887654 899999999988754
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-18 Score=156.45 Aligned_cols=155 Identities=16% Similarity=0.109 Sum_probs=117.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-CceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-TWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~~ 71 (358)
.|+||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++|+|||+|+...
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~ 86 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILR 86 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 468999999999999999999999984 111 1112455689999999999888742 6999999999753
Q ss_pred Cc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHH
Q psy7590 72 GL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 72 ~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
.. ....++....+++|+.++.++++++ ++.+..++|++||...+.. .|....|+.+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------------~~~~~~Y~~sK 150 (250)
T 2fwm_X 87 MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP----------------RIGMSAYGASK 150 (250)
T ss_dssp CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC----------------CTTCHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC----------------CCCCchHHHHH
Confidence 21 1123455678999999999999988 4556679999999976532 12223799999
Q ss_pred HHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 145 RMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 145 ~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...|.+.+.++.+ .|+++++++|+.++++.
T Consensus 151 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 183 (250)
T 2fwm_X 151 AALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183 (250)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence 9999999888765 38999999999998874
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=165.13 Aligned_cols=153 Identities=19% Similarity=0.168 Sum_probs=118.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----C-CC-C-----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----D-DE-T-----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~-~~-~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+|+||++++++|+++|++ . .. . ...+.++.+|++|++++.++++.. ++
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 100 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGL 100 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999974 1 10 0 112445689999999999888742 69
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeecccee-cCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIF-PDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy-~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+..... ....++....+++|+.++.++++++... + .+||++||...+ ...
T Consensus 101 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~--------------- 164 (274)
T 1ja9_A 101 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI--------------- 164 (274)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC---------------
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC---------------
Confidence 9999999975321 1122344678999999999999999875 4 589999999776 321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...|.+++.++.+. |+.+++++|+.++++
T Consensus 165 -~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~ 206 (274)
T 1ja9_A 165 -PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD 206 (274)
T ss_dssp -CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 112279999999999999887764 899999999999865
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-18 Score=159.82 Aligned_cols=159 Identities=16% Similarity=0.191 Sum_probs=119.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccC----CC--------------CceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRD----DE--------------TWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~----~~--------------~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
|+++++||||||+|.||++++++|+++|++- .. ....+.++.+|++|++++.++++..
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF 102 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 5556789999999999999999999999741 00 0123556789999999999888753
Q ss_pred -CCcEEEEcccccCCcc----ccccchhhHHHHHHHHHHHHHHHHHhc-------CCCEEEEeeccceecCCCCCCCccc
Q psy7590 59 -KPTHVIHLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLDTSYKQ-------GVKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~aa~~~-------~v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
++|+|||+|+...... .+.++....+++|+.++..+++++... +..++|++||...+...
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 174 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGS-------- 174 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCC--------
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCC--------
Confidence 7999999999754211 133455678999999999999988764 24589999998654321
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+ +....|+.+|...+.+.+.++.+. |+++++++|+.|.++.
T Consensus 175 ------~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 218 (272)
T 4e3z_A 175 ------A-TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218 (272)
T ss_dssp ------T-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred ------C-CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence 1 111269999999999998887765 8999999999998774
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=7.3e-19 Score=160.43 Aligned_cols=154 Identities=18% Similarity=0.101 Sum_probs=118.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc------cCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK------YKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~------~~~ 60 (358)
.|+||||||+|+||+++++.|+++|++ .... ...+..+.+|++|++++.++++. .++
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 88 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKL 88 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999974 1100 12345668999999999888853 269
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+..... ....++....+++|+.++.++++++. +.+..++|++||...+...
T Consensus 89 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 153 (260)
T 2ae2_A 89 NILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV--------------- 153 (260)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC---------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---------------
Confidence 9999999975321 11233456789999999999999984 4566799999998765321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...|.+.+.++.+. |+++++++|+.+..+
T Consensus 154 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (260)
T 2ae2_A 154 -PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 195 (260)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence 122379999999999999887764 899999999988765
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=8.9e-19 Score=159.97 Aligned_cols=212 Identities=17% Similarity=0.151 Sum_probs=149.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC------------CCceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD------------ETWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~------------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
|++||||||+|.||++++++|+++|++ .. .....+.++.+|++|++++.++++.. ++
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 86 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKI 86 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999974 10 00123556789999999999888753 79
Q ss_pred cEEEEccccc--CC---ccccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMV--GG---LFHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~--~~---~~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|+|||+|+.. .. .....++....+++|+.++.++++++ ++.+..++|++||.+.++..
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------------- 153 (264)
T 3i4f_A 87 DFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP------------- 153 (264)
T ss_dssp CEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC-------------
T ss_pred CEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC-------------
Confidence 9999999942 11 01123345678999999999999998 56666799999998554321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcc
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESR 208 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (358)
..+....|+.+|...+.+.+.++.+ .|+++.+++|+.++++.... . ..........
T Consensus 154 -~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~----~~~~~~~~~~---------- 212 (264)
T 3i4f_A 154 -GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEA------T----IQEARQLKEH---------- 212 (264)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSC------C----HHHHHHC-------------
T ss_pred -CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchh------c----cHHHHHHHhh----------
Confidence 1122237999999999999888776 58999999999998875332 1 1111111110
Q ss_pred cCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCccc
Q psy7590 209 ARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVT 287 (358)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s 287 (358)
. .+...+.+.+|+|+++++++..... ..++++++.+|....
T Consensus 213 -----------------------------~---------~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~ 254 (264)
T 3i4f_A 213 -----------------------------N---------TPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVI 254 (264)
T ss_dssp -------------------------------------------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred -----------------------------c---------CCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeec
Confidence 1 1123367899999999999976533 345689998876543
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-18 Score=159.62 Aligned_cols=155 Identities=13% Similarity=0.128 Sum_probs=119.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+|+||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGA 86 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999974 1100 112455689999999998888743 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+...... ...++....+++|+.++.++++++. +.+..++|++||...+...
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 151 (263)
T 3ai3_A 87 DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL--------------- 151 (263)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC---------------
Confidence 99999999753211 1223456788999999999988875 3466799999999776432
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+ .|+++++++|+.++++.
T Consensus 152 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (263)
T 3ai3_A 152 -WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD 194 (263)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 12227999999999999888776 58999999999998873
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.80 E-value=9.2e-19 Score=157.70 Aligned_cols=155 Identities=16% Similarity=0.140 Sum_probs=114.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC----CCC--------------ceeeec-ccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD----DET--------------WIFVSS-KEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~----~~~--------------~~~~~~-~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
||+||||||+|+||++++++|+++|++- ... ...+.. +.+|++|++++.++++.. +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999998730 000 011223 689999999998887632 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHH----HHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKI----NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|+|||+|+..... ....++....+++|+.+ ++.+++++++.+.+++|++||...+...
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------------- 146 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN-------------- 146 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC--------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC--------------
Confidence 99999999975421 11233456789999999 5555555566677899999998543211
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...|.+.+.++.+. |++++++||+.++++.
T Consensus 147 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 189 (245)
T 2ph3_A 147 --PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM 189 (245)
T ss_dssp --SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcc
Confidence 112279999999999988887664 8999999999998764
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.3e-18 Score=156.95 Aligned_cols=155 Identities=21% Similarity=0.191 Sum_probs=116.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|+||++++++|+++|++ .... ...+.++.+|++|++++.++++.. ++
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 86 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGI 86 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999974 1100 113455689999999999888742 69
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+..... ....++....+++|+.++.++++++ ++.+.+++|++||...+...
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------------- 151 (248)
T 2pnf_A 87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN--------------- 151 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC---------------
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC---------------
Confidence 9999999975421 1122345678999999996665554 45677899999998543211
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...|.+.+.++.+ .++++++++|+.++++.
T Consensus 152 -~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 194 (248)
T 2pnf_A 152 -VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194 (248)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCch
Confidence 11227999999999999888765 38999999999998774
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-18 Score=156.42 Aligned_cols=155 Identities=16% Similarity=0.198 Sum_probs=118.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.+++|||||+|.||+++++.|+++|++ .... ...+.++.+|++|++++.++++.. ++|++|
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 86 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGLV 86 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 368999999999999999999999984 1111 113456689999999999888743 699999
Q ss_pred EcccccCCc-------cccccchhhHHHHHHHHHHHHHHHHHhc----------CCCEEEEeeccceecCCCCCCCcccc
Q psy7590 65 HLAAMVGGL-------FHNMSHNLDFFRVNMKINDNVLDTSYKQ----------GVKKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 65 h~a~~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~v~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
|+|+..... ..+.++....+++|+.++.++++++... +..++|++||...+...
T Consensus 87 ~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~--------- 157 (257)
T 3tpc_A 87 NCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ--------- 157 (257)
T ss_dssp ECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC---------
T ss_pred ECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC---------
Confidence 999975421 1123455678999999999999999764 34579999998765321
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+ .|+++.+++|+.|.++.
T Consensus 158 -------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 200 (257)
T 3tpc_A 158 -------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM 200 (257)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-
T ss_pred -------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChh
Confidence 12237999999999998888776 58999999999998764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.79 E-value=6e-18 Score=153.86 Aligned_cols=155 Identities=18% Similarity=0.167 Sum_probs=117.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC---------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET---------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
+.|+||||||+|+||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4578999999999999999999999974 1110 112445689999999999888742 6999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|||+|+...... ...++....+++|+.++..+.+++ ++.+..++|++||...+... |
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~ 146 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS----------------T 146 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------------T
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC----------------C
Confidence 999999753211 123345678999999666655554 56677899999999765321 1
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...+.+.+.++.+ .|+++++++|+.++++
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 187 (255)
T 2q2v_A 147 GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTP 187 (255)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCc
Confidence 2237999999999999988776 3799999999999876
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.7e-18 Score=154.20 Aligned_cols=153 Identities=17% Similarity=0.025 Sum_probs=117.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCc--------eeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETW--------IFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
|+||||||+|+||+++++.|+++|++ ..... ..+..+.+|++|++++.++++.. ++|+|||
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~ 92 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCA 92 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 58999999999999999999999974 10000 02445689999999998888742 6999999
Q ss_pred cccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 66 LAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 66 ~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
+|+..... ....++....+++|+.++.++++++... + ..++|++||...+... |..
T Consensus 93 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~ 156 (263)
T 3ak4_A 93 NAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA----------------PLL 156 (263)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC----------------TTC
T ss_pred CCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC----------------CCc
Confidence 99975321 1122345678999999999999888653 4 5699999998764321 122
Q ss_pred cchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...+.+.+.++.+. |+++++++|+.++++
T Consensus 157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (263)
T 3ak4_A 157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTA 195 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccCh
Confidence 379999999999998887664 899999999999876
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-18 Score=157.17 Aligned_cols=155 Identities=16% Similarity=0.107 Sum_probs=117.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.++||||||+|+||++++++|+++|++ .... ...+..+.+|++|++++.++++.. ++|+||
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv 86 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLV 86 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999999984 1100 011455689999999999888742 699999
Q ss_pred EcccccCCc---cccccchhhHHHHHHHHHHHHHHH----HHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDT----SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+|+..... ....++....+++|+.++.++.++ +++++..++|++||...+... |..
T Consensus 87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~ 150 (260)
T 1nff_A 87 NNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT----------------VAC 150 (260)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------TTB
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC----------------CCc
Confidence 999975421 112334567899999999655554 455667799999999765321 122
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
..|+.+|...|.+.+.++.+ .|++++++||+.++++.
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (260)
T 1nff_A 151 HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred hhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCc
Confidence 37999999999999888766 58999999999998774
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.9e-19 Score=160.86 Aligned_cols=165 Identities=15% Similarity=0.103 Sum_probs=117.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc--CCcEEEEcccccCCccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY--KPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vih~a~~~~~~~~ 75 (358)
||+||||||+|+||+++++.|+++|++ ....... .+.+|+++++++.++++.. ++|+|||+|+....
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~~--- 75 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQ--- 75 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTT---
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCCC---
Confidence 468999999999999999999999974 2222211 2679999999999999754 57999999997531
Q ss_pred cccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccc-----ccc-------CCCCCCCCcc
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDET-----MVH-------NGPPHPSNFG 139 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~-----~~~-------~~~~~p~~~~ 139 (358)
.......+++|+.++.++++++. +.+..++|++||...+......+..++ +.. ...+.+....
T Consensus 76 -~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T 1fjh_A 76 -TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA 154 (257)
T ss_dssp -CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHH
T ss_pred -cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccH
Confidence 24578899999999999999886 445679999999988732111111000 000 0011112237
Q ss_pred hHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
|+.||...+.+.+.++.+ .|+++++++|+.+.++.
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 192 (257)
T 1fjh_A 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192 (257)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence 999999999999887765 58999999999988764
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.5e-18 Score=156.90 Aligned_cols=158 Identities=19% Similarity=0.187 Sum_probs=120.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc---
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
|++.|+||||||+|+||+++++.|+++|++ .... ...+..+.+|++|++++.++++..
T Consensus 1 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 677789999999999999999999999974 1111 113455689999999998888642
Q ss_pred --CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 59 --KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 --~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++|++||+|+...... ...++....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 149 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS----------- 149 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----------
Confidence 6999999999753211 12334567899999999998888853 456799999998765321
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+. |+++++++|+.+.++.
T Consensus 150 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T 1x1t_A 150 -----ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCch
Confidence 122379999999999998887664 8999999999998774
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.2e-18 Score=153.86 Aligned_cols=214 Identities=15% Similarity=0.063 Sum_probs=149.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc-----CCC-------------CceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR-----DDE-------------TWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
|++.++||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++..
T Consensus 1 M~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 1 MEQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp --CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 777889999999999999999999999974 000 0113455689999999999888753
Q ss_pred -CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 -KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|++||+|+..... ....++....+++|+.++.++++++. +.+..++|++||...+..
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------- 147 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY------------- 147 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-------------
Confidence 689999999964321 11223445689999999999999884 445569999999876532
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhc
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (358)
. +....|+.+|...+.+.+.++.+. |+++.+++|+.+..+...... .-+.+...+. .
T Consensus 148 --~-~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~----~--------- 207 (258)
T 3oid_A 148 --L-ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP----NREDLLEDAR----Q--------- 207 (258)
T ss_dssp --C-TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT----THHHHHHHHH----H---------
T ss_pred --C-CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc----cCHHHHHHHH----h---------
Confidence 1 122379999999999999887764 899999999999776432110 0011222111 1
Q ss_pred ccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcc
Q psy7590 208 RARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEV 286 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~ 286 (358)
.. +...+.+.+|+|+++++++..... ..++++++.+|...
T Consensus 208 ------------------------------~~---------p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 208 ------------------------------NT---------PAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp ------------------------------HC---------TTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred ------------------------------cC---------CCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence 11 122367899999999999876433 34568999887543
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.79 E-value=7e-18 Score=154.70 Aligned_cols=154 Identities=19% Similarity=0.172 Sum_probs=118.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~~~ 72 (358)
.++||||||+|.||+++++.|+++|++ ............+|+++.+++.++++.. ++|++||+|+....
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~ 107 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISR 107 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 368999999999999999999999984 2222222233479999999888777642 69999999997542
Q ss_pred cc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 73 LF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 73 ~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
.. ...++....+++|+.++.++++++ ++.+..++|++||...+.. .+....|+.+|.
T Consensus 108 ~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------------~~~~~~Y~asKa 171 (266)
T 3uxy_A 108 GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP----------------GPGHALYCLTKA 171 (266)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC----------------CTTBHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC----------------CCCChHHHHHHH
Confidence 11 123445678899999999999998 5556679999999866421 122237999999
Q ss_pred HHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 146 MLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 146 ~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
..+.+.+.++.+. |+.+.+++|+.+.++
T Consensus 172 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 202 (266)
T 3uxy_A 172 ALASLTQCMGMDHAPQGIRINAVCPNEVNTP 202 (266)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCCH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCCCcch
Confidence 9999998887764 899999999999765
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.7e-18 Score=155.02 Aligned_cols=154 Identities=16% Similarity=0.122 Sum_probs=118.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~~~ 72 (358)
.|+||||||+|+||+++++.|+++|++ .......+..+.+|++|++++.++++.. ++|+|||+|+....
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~ 87 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESY 87 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 368999999999999999999999974 2222223455689999999998888742 69999999997542
Q ss_pred cc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 73 LF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 73 ~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
.. ...++....+++|+.++.++++++.. .+..++|++||...+... +....|+.+|.
T Consensus 88 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~Y~~sK~ 151 (264)
T 2dtx_A 88 GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT----------------KNASAYVTSKH 151 (264)
T ss_dssp BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC----------------TTBHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC----------------CCchhHHHHHH
Confidence 11 12345667899999999888888865 356799999999765321 22237999999
Q ss_pred HHHHHHHHHHhhcC--ceEEEEecCcccCC
Q psy7590 146 MLDVLNKAYYQQHG--VTYTSVIPCNVFGP 173 (358)
Q Consensus 146 ~~E~~~~~~~~~~g--~~~~ilRp~~v~G~ 173 (358)
..+.+.+.++.+.+ +++++++|+.+.++
T Consensus 152 a~~~~~~~la~e~~~~i~vn~v~PG~v~t~ 181 (264)
T 2dtx_A 152 AVIGLTKSIALDYAPLLRCNAVCPATIDTP 181 (264)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHHhcCCcEEEEEEeCCCcCc
Confidence 99999999887654 89999999988654
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.9e-18 Score=156.91 Aligned_cols=217 Identities=19% Similarity=0.201 Sum_probs=145.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc----CC-C--------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR----DD-E--------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~----~~-~--------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
++||||||+|.||+++++.|+++|++ .. . ....+..+.+|++|++++.++++.. ++
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 105 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGA 105 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCC
Confidence 58999999999999999999999974 11 0 0123455689999999999888753 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|++||+|+...... ...++....+++|+.++.++++++ ++.+..++|++||...+...
T Consensus 106 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 170 (281)
T 3v2h_A 106 DILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS--------------- 170 (281)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC---------------
Confidence 99999999754211 123445678999999999999998 44556689999998665321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRAR 210 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (358)
|....|+.+|...+.+.+.++.+. |+++.+++|+.+.++...... +..... .....
T Consensus 171 -~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~------~~~~~~--~~~~~------------ 229 (281)
T 3v2h_A 171 -PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQI------PDQART--RGITE------------ 229 (281)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--------------------------------------
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhc------chhhhh--cCCCH------------
Confidence 222379999999999998887664 899999999999887432110 000000 00000
Q ss_pred CCCCCCCCCCCccCCCcccCCccccCCCce-EEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCC
Q psy7590 211 FPPGANSFGLDKLDLIPFSLFPFCFTGGDE-FKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKD 284 (358)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~ 284 (358)
... ........+...+++++|+|+++++++..... ..++++++.+|.
T Consensus 230 ---------------------------~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 230 ---------------------------EQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp -------------------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred ---------------------------HHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 000 01122344456789999999999999975432 234588888764
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.79 E-value=5.4e-19 Score=161.87 Aligned_cols=152 Identities=16% Similarity=0.120 Sum_probs=113.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc---
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
|++.++||||||+|+||+++++.|+++|++ ... ....+..+.+|++|++++.++++..
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 334468999999999999999999999984 100 0123456689999999999888752
Q ss_pred --CCcEEEEcccccCCccccccchhhHHHHHHHHHH----HHHHHHHhcC---CCEEEEeeccceecCCCCCCCcccccc
Q psy7590 59 --KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKIND----NVLDTSYKQG---VKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 --~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~---v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++|+|||+|+... .++....+++|+.++. .+++++++.+ ..++|++||...+...
T Consensus 84 ~g~id~lv~~Ag~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 147 (267)
T 2gdz_A 84 FGRLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----------- 147 (267)
T ss_dssp HSCCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------
T ss_pred cCCCCEEEECCCCCC-----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------
Confidence 6899999999753 3566788999988654 4555554443 5689999999776421
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHH-----hhcCceEEEEecCcccCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYY-----QQHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~-----~~~g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++ ...|+++++++|+.+.++
T Consensus 148 -----~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~ 191 (267)
T 2gdz_A 148 -----AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA 191 (267)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcch
Confidence 112279999999999888642 235899999999988765
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-18 Score=155.62 Aligned_cols=155 Identities=14% Similarity=0.124 Sum_probs=119.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc--------eeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW--------IFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.++||||||+|+||+++++.|+++|++ ..... ..+.++.+|++|++++.++++.. ++|+||
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li 91 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAV 91 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 468999999999999999999999974 22211 12456689999999999888743 699999
Q ss_pred EcccccCCcc---------ccccchhhHHHHHHHHHHHHHHHHHhc----------CCCEEEEeeccceecCCCCCCCcc
Q psy7590 65 HLAAMVGGLF---------HNMSHNLDFFRVNMKINDNVLDTSYKQ----------GVKKVVSCLSTCIFPDKTTYPIDE 125 (358)
Q Consensus 65 h~a~~~~~~~---------~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~v~r~V~~SS~~vy~~~~~~~~~E 125 (358)
|+|+...... ...++....+++|+.++.++++++... +..++|++||...+...
T Consensus 92 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------- 164 (265)
T 2o23_A 92 NCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ------- 164 (265)
T ss_dssp ECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC-------
T ss_pred ECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC-------
Confidence 9999753211 123345678999999999999998865 56689999999765321
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 126 TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 126 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+ .|+++++++|+.+.++.
T Consensus 165 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 207 (265)
T 2o23_A 165 ---------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207 (265)
T ss_dssp ---------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcc
Confidence 11237999999999888887665 48999999999997764
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-18 Score=156.08 Aligned_cols=153 Identities=22% Similarity=0.217 Sum_probs=104.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|.||++++++|+++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 88 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGID 88 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999984 100 0123456689999999999888753 799
Q ss_pred EEEEcccccCCc------cccccchhhHHHHHHHHHHHHHHH----HHhcCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 62 HVIHLAAMVGGL------FHNMSHNLDFFRVNMKINDNVLDT----SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 62 ~Vih~a~~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a----a~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
+|||+|+..+.. ....++....+++|+.++.++.++ .++.+..++|++||...|..
T Consensus 89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------- 154 (253)
T 3qiv_A 89 YLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY-------------- 154 (253)
T ss_dssp EEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------
T ss_pred EEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC--------------
Confidence 999999973211 112344567899999995555555 45556679999999977621
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
.. .|+.+|...+.+.+.++.+. |+++.+++|+.+.++..
T Consensus 155 ----~~-~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 196 (253)
T 3qiv_A 155 ----SN-YYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEAN 196 (253)
T ss_dssp ----------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------
T ss_pred ----Cc-hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccch
Confidence 12 69999999999999888875 79999999999988753
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.4e-18 Score=154.64 Aligned_cols=155 Identities=19% Similarity=0.168 Sum_probs=116.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.++||||||+|+||+++++.|+++|++ .... ...+.++.+|++|++++.++++.. ++|+
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 85 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999999999999999999999974 1100 023556689999999999888752 5999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCC-CEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGV-KKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v-~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|||+|+...... ...++....+++|+.++..+.+++ ++.+. .++|++||...+...
T Consensus 86 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 149 (251)
T 1zk4_A 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD---------------- 149 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC----------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC----------------
Confidence 999999753211 122344678999999777665554 45566 799999999765422
Q ss_pred CCCcchHHHHHHHHHHHHHHHh-----hcCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQ-----QHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~-----~~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...|.+.+.++. ..|++++++||+.++++.
T Consensus 150 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~ 194 (251)
T 1zk4_A 150 PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194 (251)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence 1223799999999999887765 458999999999998774
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=8e-19 Score=160.08 Aligned_cols=155 Identities=18% Similarity=0.135 Sum_probs=118.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.|+||||||+|+||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 93 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVD 93 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 368999999999999999999999974 1100 112445689999999988887642 699
Q ss_pred EEEEcccccCC----ccccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGG----LFHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+.... .....++....+++|+.++.++++++. +.+..++|++||...|...
T Consensus 94 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 158 (260)
T 2zat_A 94 ILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF--------------- 158 (260)
T ss_dssp EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------------
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC---------------
Confidence 99999996421 111223456789999999988888875 4567799999999776421
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+. |+++.+++|+.+..+.
T Consensus 159 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (260)
T 2zat_A 159 -PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF 201 (260)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence 122379999999999998887664 8999999999988763
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.78 E-value=3.2e-18 Score=154.18 Aligned_cols=154 Identities=14% Similarity=0.086 Sum_probs=117.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccC----CCC--------------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRD----DET--------------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~----~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
|+||||||+|+||++++++|+++|++- ... ...+..+.+|+++++++.++++.. ++|
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 589999999999999999999998740 000 113455689999999999888742 699
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+|+..... ....++....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------------- 145 (244)
T 1edo_A 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN---------------- 145 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------------
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC----------------
Confidence 999999975421 112234567899999999999998876 356799999998554211
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+ .|++++++||+.++++.
T Consensus 146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (244)
T 1edo_A 146 IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 188 (244)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccch
Confidence 11227999999999988887765 48999999999998763
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5.2e-18 Score=154.42 Aligned_cols=155 Identities=15% Similarity=0.097 Sum_probs=117.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----C--CC-C-----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----D--DE-T-----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----~--~~-~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|+||++++++|+++|++ . .. . ...+.++.+|++|++++.++++.. ++
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL 86 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999874 1 11 0 123456789999999998888743 69
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|+|||+|+..... ....++....+++|+.++.++++++... + ..++|++||...+..
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~--------------- 151 (261)
T 1gee_A 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP--------------- 151 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC---------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC---------------
Confidence 9999999975421 1122345678999999999888877643 4 569999999865421
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
. +....|+.+|...|.+.+.++.+. |++++++||+.++++.
T Consensus 152 ~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (261)
T 1gee_A 152 W-PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_dssp C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred C-CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCch
Confidence 1 222379999999998888876654 8999999999998874
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.8e-18 Score=154.26 Aligned_cols=210 Identities=15% Similarity=0.123 Sum_probs=149.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+.|+||||||+|.||++++++|+++|++ ... ....+..+.+|++|++++.++++.. ++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3568999999999999999999999974 100 0123455689999999999888753 68
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+..... ....++....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 148 (247)
T 3lyl_A 84 DILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN--------------- 148 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC---------------
Confidence 9999999975421 113344567899999999999998754 345589999998655321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRAR 210 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (358)
|....|+.+|...+.+.+.++.+ .|+++.+++|+.+..+.... ..+.....+ .
T Consensus 149 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~~~~~~~~----~------------- 204 (247)
T 3lyl_A 149 -PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDK------LTDEQKSFI----A------------- 204 (247)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTT------SCHHHHHHH----H-------------
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchh------ccHHHHHHH----h-------------
Confidence 12237999999998888887765 48999999999998775332 111111111 1
Q ss_pred CCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcc
Q psy7590 211 FPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEV 286 (358)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~ 286 (358)
...+...+.+++|+|+++++++..... ..++++++.+|..+
T Consensus 205 -----------------------------------~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 205 -----------------------------------TKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp -----------------------------------TTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred -----------------------------------hcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence 111223468999999999999976433 34568999887654
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-18 Score=153.51 Aligned_cols=156 Identities=15% Similarity=0.135 Sum_probs=119.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHH-cccc------CCC-CceeeecccccCCCHHHHHHHHhcc---CCcEEEEccccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKE-EEKR------DDE-TWIFVSSKEADLSNLESTQQLFSKY---KPTHVIHLAAMV 70 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~-~g~~------~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~---~~d~Vih~a~~~ 70 (358)
.+||+||||||+|.||+++++.|++ .|++ ... ....+..+.+|++|++++.++++.. ++|++||+|+..
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~ 81 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGIL 81 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccC
Confidence 4567899999999999999999998 6663 211 3334456789999999999888532 689999999975
Q ss_pred CCc---cccccchhhHHHHHHHHHHHHHHHHHhcCC--CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 71 GGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQGV--KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 71 ~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
... ..+.++....+++|+.++..+++++...-. .++|++||...+.. .|....|+.+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~----------------~~~~~~Y~asKa 145 (244)
T 4e4y_A 82 IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA----------------KPNSFAYTLSKG 145 (244)
T ss_dssp CCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC----------------CTTBHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC----------------CCCCchhHHHHH
Confidence 321 122344567899999999999999987532 38999999876532 122237999999
Q ss_pred HHHHHHHHHHh---hcCceEEEEecCcccCC
Q psy7590 146 MLDVLNKAYYQ---QHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 146 ~~E~~~~~~~~---~~g~~~~ilRp~~v~G~ 173 (358)
..+.+.+.++. ..|+++.+++|+.|..+
T Consensus 146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 176 (244)
T 4e4y_A 146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTD 176 (244)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEecCccCch
Confidence 99999998876 35899999999988755
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.78 E-value=8e-18 Score=153.85 Aligned_cols=156 Identities=17% Similarity=0.133 Sum_probs=118.5
Q ss_pred CCCEEEEEcCCCh-hHHHHHHHHHHcccc------C------------CCCceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 3 EEKIILVTGGTGL-VGKAIEKIVKEEEKR------D------------DETWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 3 ~~~~VlItGatG~-lG~~l~~~L~~~g~~------~------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
+.++||||||+|+ ||++++++|+++|++ . ......+.++.+|++|++++.++++..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 3568999999985 999999999999984 0 111124556789999999999888753
Q ss_pred CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc-----CCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ-----GVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~-----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|+|||+|+...... ...++....+++|+.++.++++++... +..++|++||...+..
T Consensus 101 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------- 167 (266)
T 3o38_A 101 RLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA------------- 167 (266)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC-------------
T ss_pred CCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC-------------
Confidence 6999999999754211 123345678999999999999998764 4558999999865421
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
. +....|+.+|...+.+.+.++.+ .|+.+.+++|+.+..+.
T Consensus 168 --~-~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (266)
T 3o38_A 168 --Q-HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF 211 (266)
T ss_dssp --C-TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred --C-CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence 1 22237999999999999888776 58999999999887664
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=3.4e-18 Score=157.73 Aligned_cols=156 Identities=17% Similarity=0.125 Sum_probs=120.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------------------CceeeecccccCCCHHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------------------TWIFVSSKEADLSNLESTQQL 54 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------------------~~~~~~~~~~Dl~~~~~~~~~ 54 (358)
.+++|||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 89 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESF 89 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 368999999999999999999999974 100 011344568999999999988
Q ss_pred Hhcc-----CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCC
Q psy7590 55 FSKY-----KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYP 122 (358)
Q Consensus 55 ~~~~-----~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~ 122 (358)
++.. ++|++||+|+..... ....++....+++|+.++.++++++. +.+..++|++||...+...
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 165 (281)
T 3s55_A 90 VAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN---- 165 (281)
T ss_dssp HHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC----
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC----
Confidence 8753 699999999975421 12234456789999999999999864 3455699999998765321
Q ss_pred CccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 123 IDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 123 ~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
+....|+.+|...+.+.+.++.+ .|+++.+++|+.|+++..
T Consensus 166 ------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 209 (281)
T 3s55_A 166 ------------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT 209 (281)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred ------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence 12237999999999999988875 489999999999998864
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-17 Score=153.14 Aligned_cols=157 Identities=20% Similarity=0.181 Sum_probs=122.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc--------eeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW--------IFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.+++|||||+|.||+++++.|+++|++ ..... ..+..+.+|++|++++.++++.. ++|++|
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 90 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVD 90 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999999984 21111 12345579999999999888753 699999
Q ss_pred EcccccCC-c----cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 65 HLAAMVGG-L----FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 65 h~a~~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|+|+.... . ..+.+.....+++|+.++.++++++ ++.+..++|++||...+... +
T Consensus 91 ~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------------~ 154 (271)
T 3tzq_B 91 NNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY----------------D 154 (271)
T ss_dssp ECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC----------------S
T ss_pred ECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC----------------C
Confidence 99997632 1 1123445678999999999999999 56666799999998765321 1
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~ 176 (358)
....|+.+|...+.+.+.++.+ .|+++.+++|+.++++...
T Consensus 155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 198 (271)
T 3tzq_B 155 MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE 198 (271)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence 2237999999999999988776 5899999999999988543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.3e-18 Score=155.11 Aligned_cols=212 Identities=15% Similarity=0.134 Sum_probs=149.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.+++|||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 91 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT 91 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 368999999999999999999999984 000 0123445689999999998888743 699
Q ss_pred EEEEcccccCCc--cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 62 HVIHLAAMVGGL--FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 62 ~Vih~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
++||+|+..... ....++....+++|+.++.++++++. +.+..++|++||...+.. .+
T Consensus 92 ~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~~ 155 (256)
T 3gaf_A 92 VLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENT----------------NV 155 (256)
T ss_dssp EEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCC----------------CT
T ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCC----------------CC
Confidence 999999975421 12334556789999999999999984 445569999999876532 12
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFP 212 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (358)
....|+.+|...+.+.+.++.+. |+++.+++|+.+..+.... ...+.....+ .
T Consensus 156 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~~~~----~--------------- 211 (256)
T 3gaf_A 156 RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT-----VLTPEIERAM----L--------------- 211 (256)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH-----HCCHHHHHHH----H---------------
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhh-----ccCHHHHHHH----H---------------
Confidence 22379999999999998887763 8999999999887652110 0001111111 1
Q ss_pred CCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccH
Q psy7590 213 PGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTI 288 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~ 288 (358)
...+...+.+.+|+|+++++++..... ..++++++.+|...++
T Consensus 212 ---------------------------------~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 212 ---------------------------------KHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp ---------------------------------TTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred ---------------------------------hcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCccccC
Confidence 111223467899999999999975432 3456899998876654
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-17 Score=154.34 Aligned_cols=155 Identities=15% Similarity=0.162 Sum_probs=116.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|+||+++++.|+++|++ .... ...+.++.+|++|++++.++++.. ++|
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id 123 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD 123 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999873 1000 113445689999999999888642 699
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+|+..... ....++....+++|+.++.++++++. +.+..++|++||...+...
T Consensus 124 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 187 (285)
T 2c07_A 124 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN---------------- 187 (285)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC----------------
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------------
Confidence 999999975321 11234456789999999777777765 4566799999998654321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...|.+.+.++.+. |+++++++|+.+.++.
T Consensus 188 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 230 (285)
T 2c07_A 188 VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230 (285)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCc
Confidence 112279999999999988887653 8999999999998774
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.7e-18 Score=150.96 Aligned_cols=211 Identities=11% Similarity=0.086 Sum_probs=147.3
Q ss_pred CCCC--CEEEEEcCCChhHHHHHHHHHHccccCCCCceee-ecccccCCCHHHHHHHHhcc-CCcEEEEcccccCCc---
Q psy7590 1 MAEE--KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV-SSKEADLSNLESTQQLFSKY-KPTHVIHLAAMVGGL--- 73 (358)
Q Consensus 1 m~~~--~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~~~~--- 73 (358)
||.+ +++|||||+|.||+++++.|.++|++ ...+ +...+|++|++++.++++.. ++|++||+|+.....
T Consensus 1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~----V~~~~r~~~~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~~~~ 76 (223)
T 3uce_A 1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTI----VHVASRQTGLDISDEKSVYHYFETIGAFDHLIVTAGSYAPAGKV 76 (223)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHCSTTEE----EEEESGGGTCCTTCHHHHHHHHHHHCSEEEEEECCCCCCCCSCT
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCE----EEEecCCcccCCCCHHHHHHHHHHhCCCCEEEECCCCCCCCCCc
Confidence 6653 57999999999999999999999873 1111 11238999999999999764 699999999975211
Q ss_pred -cccccchhhHHHHHHHHHHHHHHHHHhcCC--CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHH
Q psy7590 74 -FHNMSHNLDFFRVNMKINDNVLDTSYKQGV--KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150 (358)
Q Consensus 74 -~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 150 (358)
....++....+++|+.++..+++++...-. .++|++||...+... +....|+.+|...+.+
T Consensus 77 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------------~~~~~Y~asK~a~~~~ 140 (223)
T 3uce_A 77 VDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV----------------ANTYVKAAINAAIEAT 140 (223)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC----------------TTCHHHHHHHHHHHHH
T ss_pred ccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC----------------CCchHHHHHHHHHHHH
Confidence 122344567899999999999999987632 389999998765321 2223799999999999
Q ss_pred HHHHHhhcC-ceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCccc
Q psy7590 151 NKAYYQQHG-VTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229 (358)
Q Consensus 151 ~~~~~~~~g-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (358)
.+.++.+.+ +++..++|+.+..+.... ..+.....+.+....
T Consensus 141 ~~~la~e~~~i~vn~v~PG~v~t~~~~~------~~~~~~~~~~~~~~~------------------------------- 183 (223)
T 3uce_A 141 TKVLAKELAPIRVNAISPGLTKTEAYKG------MNADDRDAMYQRTQS------------------------------- 183 (223)
T ss_dssp HHHHHHHHTTSEEEEEEECSBCSGGGTT------SCHHHHHHHHHHHHH-------------------------------
T ss_pred HHHHHHhhcCcEEEEEEeCCCcchhhhh------cchhhHHHHHHHHhh-------------------------------
Confidence 999988765 999999999998764321 111222222221111
Q ss_pred CCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcc
Q psy7590 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEV 286 (358)
Q Consensus 230 ~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~ 286 (358)
.. +...+.+++|+|++++.++... ...++++++.++..+
T Consensus 184 --------~~---------~~~~~~~~~dvA~~~~~l~~~~-~~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 184 --------HL---------PVGKVGEASDIAMAYLFAIQNS-YMTGTVIDVDGGALL 222 (223)
T ss_dssp --------HS---------TTCSCBCHHHHHHHHHHHHHCT-TCCSCEEEESTTGGG
T ss_pred --------cC---------CCCCccCHHHHHHHHHHHccCC-CCCCcEEEecCCeec
Confidence 11 1223578999999999999853 334458999887654
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=4.7e-18 Score=153.16 Aligned_cols=163 Identities=15% Similarity=0.060 Sum_probs=118.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcc--cc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-------
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEE--KR------DDET--------WIFVSSKEADLSNLESTQQLFSKY------- 58 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g--~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~------- 58 (358)
|++++||||||+|+||+++++.|+++| ++ .... ...+.++.+|+++++++.++++..
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 345799999999999999999999999 63 1111 123456689999999998888743
Q ss_pred CCcEEEEcccccC-Cc---cccccchhhHHHHHHHHHHHHHHHHHhc----------C-----CCEEEEeeccceecCCC
Q psy7590 59 KPTHVIHLAAMVG-GL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----------G-----VKKVVSCLSTCIFPDKT 119 (358)
Q Consensus 59 ~~d~Vih~a~~~~-~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~-----v~r~V~~SS~~vy~~~~ 119 (358)
++|+|||+|+... .. ....++....+++|+.++.++++++... + ..++|++||...+....
T Consensus 81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 160 (250)
T 1yo6_A 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence 6999999999754 11 1122345678999999999999887653 4 67999999996654321
Q ss_pred CCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 120 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
. +.. +..+ ...|+.+|...|.+++.++.+. |+.+++++|+.+..+
T Consensus 161 ~----~~~----~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 208 (250)
T 1yo6_A 161 T----SGS----AQFP-VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN 208 (250)
T ss_dssp C----STT----SSSC-BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred c----ccc----ccCC-ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecC
Confidence 0 111 1122 3379999999999999887765 899999999987654
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=9.8e-18 Score=154.51 Aligned_cols=154 Identities=23% Similarity=0.204 Sum_probs=117.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|+||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 101 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 101 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999973 1100 112445689999999998888642 699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc------CCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ------GVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~------~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|||+|+...... ...++....+++|+.++.++++++... +..++|++||...+..
T Consensus 102 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~--------------- 166 (277)
T 2rhc_B 102 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG--------------- 166 (277)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC---------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC---------------
Confidence 9999999753211 122344678999999999999998765 5569999999865421
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+....|+.+|...+.+.+.++.+ .|+++++++|+.+.++
T Consensus 167 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 209 (277)
T 2rhc_B 167 -VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209 (277)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSH
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCc
Confidence 112237999999999999888765 3799999999998865
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-17 Score=150.40 Aligned_cols=208 Identities=17% Similarity=0.173 Sum_probs=142.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-CCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~ 68 (358)
.++||||||+|+||+++++.|+++|++ .... ...+.++.+|+++++++.++++.. ++|+|||+|+
T Consensus 14 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~Ag 93 (249)
T 3f9i_A 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNAG 93 (249)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 568999999999999999999999984 1000 013445689999999999999864 6999999999
Q ss_pred ccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 69 MVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 69 ~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
..... ....++....+++|+.++.++++++.. .+..++|++||...+... |....|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~Y~ 157 (249)
T 3f9i_A 94 ITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN----------------PGQANYC 157 (249)
T ss_dssp -------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC----------------SCSHHHH
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC----------------CCCchhH
Confidence 75421 123456678999999999999888743 455699999998765321 1223799
Q ss_pred HHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCC
Q psy7590 142 HAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSF 218 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (358)
.+|...+.+.+.++.+ .|+.+.+++|+.+.++.... ..+.....+..
T Consensus 158 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~~~~~~~~~~------------------------ 207 (249)
T 3f9i_A 158 ASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK------LNEKQREAIVQ------------------------ 207 (249)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------------CCHHHHHHHHH------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccc------cCHHHHHHHHh------------------------
Confidence 9999999988888765 48999999999998764321 11222222111
Q ss_pred CCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCc
Q psy7590 219 GLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDE 285 (358)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~ 285 (358)
+ .+...+.+++|+|+++++++..... ..++++++.++..
T Consensus 208 -------------------~---------~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 208 -------------------K---------IPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGML 247 (249)
T ss_dssp -------------------H---------CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred -------------------c---------CCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCEe
Confidence 1 1123468899999999999986533 2446899987754
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.78 E-value=6.9e-18 Score=155.73 Aligned_cols=157 Identities=18% Similarity=0.131 Sum_probs=117.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
|++.++||||||+|.||+++++.|+++|++ .. .....+..+.+|++|++++.++++..
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 666778999999999999999999999984 10 01123455689999999998888653
Q ss_pred CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh------cCCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 59 KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK------QGVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~------~~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++|+|||+|+...... ...++....+++|+.++.++++++.. .+..++|++||...+..
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~------------ 168 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQG------------ 168 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSC------------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccC------------
Confidence 6999999999754211 12234456788999999999998865 45569999999876422
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+....|+.+|...+.+.+.++.+ .|+++.+++|+.|..+
T Consensus 169 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 211 (279)
T 3sju_A 169 ----VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETP 211 (279)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSH
T ss_pred ----CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccch
Confidence 122237999999999999888776 5899999999988754
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=152.44 Aligned_cols=155 Identities=17% Similarity=0.151 Sum_probs=116.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
+.|+||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|+|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4578999999999999999999999974 1100 112445689999999998888642 69999
Q ss_pred EEcccccCCc---cccccchhhHHHHHHHHHH----HHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGL---FHNMSHNLDFFRVNMKIND----NVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~---~~~~~~~~~~~~~nv~~~~----~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+|+..... ....++....+++|+.++. .+++.+++.+..++|++||...+... |.
T Consensus 84 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~ 147 (254)
T 1hdc_A 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL----------------AL 147 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------TT
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC----------------CC
Confidence 9999975321 1123345678999999987 45555566667799999998765321 12
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...+.+.+.++.+ .|+++++++|+.++++
T Consensus 148 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1hdc_A 148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCc
Confidence 237999999999999888765 4899999999998765
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.3e-18 Score=153.91 Aligned_cols=214 Identities=16% Similarity=0.160 Sum_probs=148.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc----C-C-------------CCceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR----D-D-------------ETWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~----~-~-------------~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
|++.++||||||+|.||++++++|+++|++ . . .....+.++.+|++|++++.++++..
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 555678999999999999999999999973 0 0 00123455689999999998888743
Q ss_pred -CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 -KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|+|||+|+...... ...++....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 169 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA------------ 169 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC------------
Confidence 6999999999754211 12344567899999999999988754 455699999998654321
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhc
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (358)
+....|+.+|...+.+.+.++.+. |+++.+++|+.+..+..... ......
T Consensus 170 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~----------~~~~~~------------- 222 (269)
T 3gk3_A 170 ----FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV----------PQDVLE------------- 222 (269)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC------------------------------
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh----------chhHHH-------------
Confidence 122379999999998888877653 89999999999877643211 000000
Q ss_pred ccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcc
Q psy7590 208 RARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEV 286 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~ 286 (358)
. ......+...+.+.+|+|+++++++..... ..++++++.+|..+
T Consensus 223 ------------------------------~----~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~ 268 (269)
T 3gk3_A 223 ------------------------------A----KILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGMHM 268 (269)
T ss_dssp ------------------------------C----CSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCC
T ss_pred ------------------------------H----HhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeC
Confidence 0 000111223457899999999999876433 34568999888655
Q ss_pred c
Q psy7590 287 T 287 (358)
Q Consensus 287 s 287 (358)
+
T Consensus 269 s 269 (269)
T 3gk3_A 269 S 269 (269)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.77 E-value=7.4e-18 Score=153.72 Aligned_cols=156 Identities=15% Similarity=0.061 Sum_probs=117.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhc----cCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSK----YKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~----~~~ 60 (358)
.++||||||+|+||+++++.|+++|++ .... ...+..+.+|++|++++.++++. .++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gi 86 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGA 86 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999974 1100 01345568999999999888863 249
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+..... ....++....+++|+.++..+.+++ ++.+..++|++||...+...
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 151 (260)
T 2z1n_A 87 DILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW--------------- 151 (260)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC---------------
Confidence 9999999964321 1122345678999999996666655 45567799999999776321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
+....|+.+|...+.+.+.++.+. |+++++++|+.++++..
T Consensus 152 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 195 (260)
T 2z1n_A 152 -QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV 195 (260)
T ss_dssp -TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence 122379999999999988887664 89999999999998753
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=1.2e-17 Score=151.19 Aligned_cols=156 Identities=15% Similarity=0.141 Sum_probs=118.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------CceeeecccccCCCHHHHHHHHhcc-CCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------TWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~ 70 (358)
.|+||||||+|+||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++|+|||+|+..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~~ 85 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFV 85 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCccC
Confidence 468999999999999999999999974 110 0113455689999999998877654 699999999975
Q ss_pred CCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 71 GGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 71 ~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
.... ...++....+++|+.++.++++++.. .+..++|++||...+... + . ....|+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------~-~-~~~~Y~~s 150 (246)
T 2ag5_A 86 HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG-------------V-V-NRCVYSTT 150 (246)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC-------------C-T-TBHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC-------------C-C-CCccHHHH
Confidence 4211 12234566889999999999998763 456799999998654321 1 0 22379999
Q ss_pred HHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 144 KRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 144 K~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
|...|.+.+.++.+. |++++++||+.++++.
T Consensus 151 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 184 (246)
T 2ag5_A 151 KAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (246)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence 999999998887653 8999999999998763
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=6.6e-18 Score=156.85 Aligned_cols=154 Identities=18% Similarity=0.227 Sum_probs=120.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 126 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL 126 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999974 110 0123455689999999998888653 69
Q ss_pred cEEEEcccccCCcc----ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 61 THVIHLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 61 d~Vih~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|++||+|+...... ...++....+++|+.++.++++++...- ..++|++||...+...
T Consensus 127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 190 (291)
T 3ijr_A 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN---------------- 190 (291)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC----------------
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC----------------
Confidence 99999999753211 1334567899999999999999998753 3489999999766422
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++.+. |+++.+++|+.|.++
T Consensus 191 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 232 (291)
T 3ijr_A 191 ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTP 232 (291)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCST
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCC
Confidence 112279999999999998887764 899999999999876
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.77 E-value=9.4e-18 Score=151.99 Aligned_cols=154 Identities=14% Similarity=0.113 Sum_probs=114.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~~~ 72 (358)
.++||||||+|.||+++++.|+++|++ .......+..+.+|++|++++.++++.. ++|++||+|+....
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~ 94 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSAD 94 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 468999999999999999999999974 2221111112589999999998888642 68999999997532
Q ss_pred c---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 73 L---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 73 ~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
. ....++....+++|+.++.++++++.. .+..++|++||...+... +....|+.+|.
T Consensus 95 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~Y~~sK~ 158 (247)
T 1uzm_A 95 AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI----------------GNQANYAASKA 158 (247)
T ss_dssp ----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------------CCHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC----------------CCChhHHHHHH
Confidence 1 122345577899999999999998864 466799999998654211 11237999999
Q ss_pred HHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 146 MLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 146 ~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..+.+.+.++.+ .|+++++++|+.+..+
T Consensus 159 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 189 (247)
T 1uzm_A 159 GVIGMARSIARELSKANVTANVVAPGYIDTD 189 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEeCCCccc
Confidence 999888887765 4899999999988654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.77 E-value=7.2e-18 Score=153.60 Aligned_cols=162 Identities=17% Similarity=0.075 Sum_probs=120.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+|+||++++++|+++|++ .... ...+.++.+|++|++++.++++.. ++
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 93 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI 93 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 368999999999999999999999973 1111 113456789999999998887642 48
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|+|||+|+...... ...++....+++|+.++.++++++... + ..+||++||...+..... ... +
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~----~ 165 (265)
T 1h5q_A 94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLN----G 165 (265)
T ss_dssp EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETT----E
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccc----c
Confidence 99999999754211 122345668999999999999998653 3 368999999876532210 001 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
..+.. .|+.+|...|.+++.++.+. |++++++||+.++++.
T Consensus 166 ~~~~~-~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (265)
T 1h5q_A 166 SLTQV-FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 209 (265)
T ss_dssp ECSCH-HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred ccccc-ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence 22233 79999999999998887653 8999999999998774
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-17 Score=150.79 Aligned_cols=156 Identities=17% Similarity=0.125 Sum_probs=119.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC------------CCceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD------------ETWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~------------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+|.||+++++.|+++|++ .. .....+..+.+|++|++++.++++.. ++
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 89 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGI 89 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 368999999999999999999999983 10 00023455689999999998888643 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|++||+|+...... .+.++....+++|+.++.++++++... +..++|++||...... +
T Consensus 90 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~--------------~- 154 (262)
T 3pk0_A 90 DVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT--------------G- 154 (262)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB--------------C-
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC--------------C-
Confidence 99999999754211 123345667999999999999888765 6679999999854210 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+.++.+ .|+++.+++|+.+.++.
T Consensus 155 ~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 198 (262)
T 3pk0_A 155 YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG 198 (262)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence 112237999999999999988877 58999999999998763
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-17 Score=154.26 Aligned_cols=167 Identities=14% Similarity=0.119 Sum_probs=127.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C--------CCCceeeecccccCCCHHHHHHHHhcc-CCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D--------DETWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~--------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~ 68 (358)
.++||||||+|.||++++++|+++|++ . ..-...+.++.+|++|++++.++++.. ++|+|||+||
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nAg 95 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNAG 95 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECCc
Confidence 368999999999999999999999984 1 011124566789999999999999865 6899999999
Q ss_pred ccCCc-cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCC-CCCccccccCCCCCCCCcchHHHHHH
Q psy7590 69 MVGGL-FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT-YPIDETMVHNGPPHPSNFGYSHAKRM 146 (358)
Q Consensus 69 ~~~~~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~-~~~~E~~~~~~~~~p~~~~Y~~sK~~ 146 (358)
...+. ..+.++....+++|+.++.++++++.....+|+|++||...+..... ....++. .+..+. ..|+.||..
T Consensus 96 ~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~---~~~~~~-~~Y~~sK~a 171 (291)
T 3rd5_A 96 IMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRS---RRYSPW-LAYSQSKLA 171 (291)
T ss_dssp CCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSS---SCCCHH-HHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccc---cCCCCc-chHHHHHHH
Confidence 76532 12345677899999999999999999988789999999977643221 1111111 022222 379999999
Q ss_pred HHHHHHHHHhhc---C--ceEEEEecCcccCCC
Q psy7590 147 LDVLNKAYYQQH---G--VTYTSVIPCNVFGPH 174 (358)
Q Consensus 147 ~E~~~~~~~~~~---g--~~~~ilRp~~v~G~~ 174 (358)
.+.+.+.++.+. | +.+.+++|+.|..+-
T Consensus 172 ~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~ 204 (291)
T 3rd5_A 172 NLLFTSELQRRLTAAGSPLRALAAHPGYSHTNL 204 (291)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccc
Confidence 999998887764 4 999999999997664
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.77 E-value=2.1e-17 Score=150.62 Aligned_cols=158 Identities=15% Similarity=0.134 Sum_probs=119.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------C-----------CCCceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------D-----------DETWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~-----------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
|+.|+||||||+|.||+++++.|+++|++ . ......+..+.+|++|++++.++++.. +
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45578999999999999999999999983 0 001123455689999999999888753 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH-----HhcCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS-----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa-----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
+|++||+|+..... ..+.++....+++|+.++.++.+++ ++.+..++|++||...+...
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 150 (257)
T 3imf_A 84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG------------- 150 (257)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-------------
Confidence 99999999964321 1223445678999999999999998 33445689999998665321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHh----hcCceEEEEecCcccCCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQ----QHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~----~~g~~~~ilRp~~v~G~~~ 175 (358)
|....|+.+|...+.+.+.++. ..|+++.+++|+.+.++..
T Consensus 151 ---~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~ 195 (257)
T 3imf_A 151 ---PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGG 195 (257)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCC
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcc
Confidence 2223799999999988887764 3489999999999988753
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.4e-17 Score=153.29 Aligned_cols=221 Identities=18% Similarity=0.192 Sum_probs=151.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------------------CceeeecccccCCCHHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------------------TWIFVSSKEADLSNLESTQQL 54 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------------------~~~~~~~~~~Dl~~~~~~~~~ 54 (358)
.++||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 92 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAA 92 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHH
Confidence 468999999999999999999999974 100 011345568999999999988
Q ss_pred Hhcc-----CCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCc
Q psy7590 55 FSKY-----KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPID 124 (358)
Q Consensus 55 ~~~~-----~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~ 124 (358)
++.. ++|++||+|+..... ...++....+++|+.++.++++++... + ..++|++||...+....
T Consensus 93 ~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 166 (278)
T 3sx2_A 93 LQAGLDELGRLDIVVANAGIAPMS-AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG----- 166 (278)
T ss_dssp HHHHHHHHCCCCEEEECCCCCCCS-STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC-----
T ss_pred HHHHHHHcCCCCEEEECCCCCCCC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc-----
Confidence 8743 699999999976432 234566789999999999999997543 2 45899999986543211
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCc
Q psy7590 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKD 201 (358)
Q Consensus 125 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (358)
...|....|+.+|...+.+.+.++.+. |+++.+++|+.|.++.... .....++.... ..
T Consensus 167 -------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~~~~~---~~--- 228 (278)
T 3sx2_A 167 -------SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN-----EFTREWLAKMA---AA--- 228 (278)
T ss_dssp -------CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS-----HHHHHHHHHHH---HH---
T ss_pred -------cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh-----hhHHHHHhhcc---ch---
Confidence 111222379999999999998887654 7999999999998875431 01111111111 11
Q ss_pred cchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEc
Q psy7590 202 QSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSV 280 (358)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~ 280 (358)
...........+ ..+++.+|+|+++++++..... ..++++++
T Consensus 229 ------------------------------------~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~v 271 (278)
T 3sx2_A 229 ------------------------------------TDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPV 271 (278)
T ss_dssp ------------------------------------CC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEE
T ss_pred ------------------------------------hhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeE
Confidence 111111222223 5678999999999999875432 34458888
Q ss_pred cCCCc
Q psy7590 281 DEKDE 285 (358)
Q Consensus 281 ~~~~~ 285 (358)
.+|..
T Consensus 272 dGG~~ 276 (278)
T 3sx2_A 272 DAGFL 276 (278)
T ss_dssp STTTT
T ss_pred CCCcc
Confidence 87643
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-17 Score=151.60 Aligned_cols=158 Identities=18% Similarity=0.146 Sum_probs=118.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc-----C-CC-C-----------ceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR-----D-DE-T-----------WIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~-----~-~~-~-----------~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
|++.|+||||||+|.||+++++.|+++|++ . .. . ...+..+.+|++|++++.++++..
T Consensus 1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 567789999999999999999999999974 1 10 0 112445689999999999888742
Q ss_pred -CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 -KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|++||+|+..... ....++....+++|+.++.++.+++. +.+..++|++||...+...
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 148 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN------------ 148 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC------------
Confidence 699999999975321 11223456789999999666666554 4566799999998654211
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
|....|+.+|...+.+.+.++.+ .|+++++++|+.+..+.
T Consensus 149 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (246)
T 2uvd_A 149 ----PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM 191 (246)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcc
Confidence 12237999999999888777654 48999999999998764
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.77 E-value=9e-18 Score=158.35 Aligned_cols=158 Identities=16% Similarity=0.171 Sum_probs=118.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccC------C-CC---------------ceeeecccccCCCHHHHHHHHhcc--
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRD------D-ET---------------WIFVSSKEADLSNLESTQQLFSKY-- 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~------~-~~---------------~~~~~~~~~Dl~~~~~~~~~~~~~-- 58 (358)
+.++||||||+|+||+++++.|+++|++- . .+ ...+..+.+|++|++++.++++..
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999841 0 00 123556789999999999888753
Q ss_pred ---CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccc
Q psy7590 59 ---KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 59 ---~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
++|+|||+||..... ..+.++....+++|+.++.++++++ ++.+..++|++||...+...
T Consensus 84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~---------- 153 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGT---------- 153 (324)
T ss_dssp HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCC----------
Confidence 799999999964321 1123345678899999999999999 56677799999998765321
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
.|....|+.||...|.+.+.++.+ .|+++++++||.+.++..
T Consensus 154 -----~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 154 -----PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp -----CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 111227999999999999988776 489999999999986643
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-17 Score=153.79 Aligned_cols=229 Identities=14% Similarity=0.158 Sum_probs=153.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ce---eeecccccCCCHHHHHHHHhcc-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WI---FVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~---~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
.|+||||||+|.||+++++.|+++|++ .... .. .+..+.+|++|++++.++++..
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 105 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFG 105 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999984 1000 00 3456689999999998888642
Q ss_pred CCcEEEEcccccCCc-----cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 59 KPTHVIHLAAMVGGL-----FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++|+|||+|+..... ....++....+++|+.++.++++++... + .++|++||...+...
T Consensus 106 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~----------- 173 (297)
T 1xhl_A 106 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA----------- 173 (297)
T ss_dssp CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC-----------
T ss_pred CCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC-----------
Confidence 699999999965321 1123345678999999999999888653 4 699999998765321
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHH-HHHHHHhhhhcCccchh
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGL-IRKLYDTIEKGKDQSVF 205 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 205 (358)
.|....|+.+|...+.+.+.++.+ .|+++++++|+.+.++........ . -... ..........
T Consensus 174 ----~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~-~-~~~~~~~~~~~~~~~------- 240 (297)
T 1xhl_A 174 ----HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLP-E-TASDKLYSFIGSRKE------- 240 (297)
T ss_dssp ----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCC-H-HHHHHHHHHHHHCTT-------
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccc-c-ccccchHHHHHHHHh-------
Confidence 022237999999999999888754 589999999999987631100000 0 0000 0001110000
Q ss_pred hcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhc-C-CCCCceEEccCC
Q psy7590 206 ESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREY-D-SVEPIILSVDEK 283 (358)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~-~-~~~~~v~n~~~~ 283 (358)
. .+...+...+|+|+++++++... . ...++++++.++
T Consensus 241 --------------------------------~---------~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG 279 (297)
T 1xhl_A 241 --------------------------------C---------IPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG 279 (297)
T ss_dssp --------------------------------T---------CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred --------------------------------c---------CCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCC
Confidence 1 11223688999999999998654 2 233458999888
Q ss_pred CcccHHHHHHHHHHH
Q psy7590 284 DEVTIAEVAEAIANA 298 (358)
Q Consensus 284 ~~~s~~ei~~~i~~~ 298 (358)
..+.+.+.+..+.+.
T Consensus 280 ~~~~~~~~~~~~~~~ 294 (297)
T 1xhl_A 280 STLVMGMQTHDLMSV 294 (297)
T ss_dssp GGGCCGGGGSCHHHH
T ss_pred ccccccccccchhhh
Confidence 777766655555444
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.3e-18 Score=154.83 Aligned_cols=215 Identities=17% Similarity=0.053 Sum_probs=149.2
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHcccc------CCC---C-------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKR------DDE---T-------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~------~~~---~-------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+ |+||+++++.|+++|++ ... . ...+.++.+|++|++++.++++.. ++
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL 87 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999 99999999999999974 111 0 011345689999999998888743 68
Q ss_pred cEEEEcccccCC------c-cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGG------L-FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~------~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|+|||+|+.... . ....++....+++|+.++.++++++...- -.++|++||...+..
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------------- 153 (261)
T 2wyu_A 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-------------- 153 (261)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB--------------
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCC--------------
Confidence 999999997531 0 12234556789999999999999998752 248999999865421
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcc
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESR 208 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (358)
.|....|+.+|...+.+.+.++.+. |+++++++|+.++++..... ...+.+...+. +
T Consensus 154 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~----~---------- 213 (261)
T 2wyu_A 154 --VPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI----PGFTKMYDRVA----Q---------- 213 (261)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC----TTHHHHHHHHH----H----------
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc----cccHHHHHHHH----h----------
Confidence 1122279999999999998887764 89999999999988743211 01122222211 1
Q ss_pred cCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCccc
Q psy7590 209 ARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVT 287 (358)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s 287 (358)
..+ ...+.+++|+|+++++++..... ..++++++.++..++
T Consensus 214 -----------------------------~~p---------~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 255 (261)
T 2wyu_A 214 -----------------------------TAP---------LRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM 255 (261)
T ss_dssp -----------------------------HST---------TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred -----------------------------cCC---------CCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCcccc
Confidence 111 11256889999999999865332 234589998886655
Q ss_pred HHH
Q psy7590 288 IAE 290 (358)
Q Consensus 288 ~~e 290 (358)
..|
T Consensus 256 ~~~ 258 (261)
T 2wyu_A 256 GME 258 (261)
T ss_dssp C--
T ss_pred CCC
Confidence 433
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.8e-18 Score=153.51 Aligned_cols=154 Identities=16% Similarity=0.097 Sum_probs=116.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC------ceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a 67 (358)
++||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|++||+|
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA 107 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNA 107 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 57999999999999999999999984 1111 112455689999999998888752 699999999
Q ss_pred cccCCcc--ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 68 AMVGGLF--HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 68 ~~~~~~~--~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
+...... ...++....+++|+.++.++++++.. .+..++|++||...+... +....|+
T Consensus 108 g~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------------~~~~~Y~ 171 (260)
T 3gem_A 108 SEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS----------------SKHIAYC 171 (260)
T ss_dssp CCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC----------------SSCHHHH
T ss_pred CccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC----------------CCcHhHH
Confidence 9754211 11223456899999999999998854 355699999998765321 1223799
Q ss_pred HHHHHHHHHHHHHHhhc--CceEEEEecCcccCCC
Q psy7590 142 HAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~ 174 (358)
.+|...+.+.+.++.+. ++.+.+++|+.+..+.
T Consensus 172 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~ 206 (260)
T 3gem_A 172 ATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQP 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence 99999999999888775 4999999999987653
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=152.74 Aligned_cols=154 Identities=16% Similarity=0.171 Sum_probs=118.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-CceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-TWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~~ 71 (358)
.|+||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++|++||+|+...
T Consensus 14 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~ 93 (269)
T 3vtz_A 14 DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQ 93 (269)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC
Confidence 478999999999999999999999984 111 1113345689999999999888753 7999999999754
Q ss_pred Ccc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHH
Q psy7590 72 GLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 72 ~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
... ...+.....+++|+.++..+++++.. .+..++|++||...+... +....|+.||
T Consensus 94 ~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~Y~asK 157 (269)
T 3vtz_A 94 YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT----------------KNAAAYVTSK 157 (269)
T ss_dssp CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC----------------TTCHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC----------------CCChhHHHHH
Confidence 211 12233456788999999999888754 456699999999776421 1223799999
Q ss_pred HHHHHHHHHHHhhc--CceEEEEecCcccCC
Q psy7590 145 RMLDVLNKAYYQQH--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 145 ~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~ 173 (358)
...+.+.+.++.+. ++.+.+++|+.|.++
T Consensus 158 aa~~~l~~~la~e~~~~i~vn~v~PG~v~T~ 188 (269)
T 3vtz_A 158 HALLGLTRSVAIDYAPKIRCNAVCPGTIMTP 188 (269)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEEECCCcCc
Confidence 99999999988876 799999999998765
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-17 Score=153.72 Aligned_cols=154 Identities=17% Similarity=0.127 Sum_probs=118.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------------CceeeecccccCCCHHHHHHHHhcc---
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------------TWIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------------~~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
.++||||||+|+||++++++|+++|++ ... ....+.++.+|++|++++.++++..
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 97 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT 97 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999973 100 1123556689999999999888752
Q ss_pred --CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 59 --KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 --~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++|+|||+|+..... ....++....+++|+.++.++++++... +..++|++||...++
T Consensus 98 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------- 164 (303)
T 1yxm_A 98 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG------------- 164 (303)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-------------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccC-------------
Confidence 699999999964311 1122345668999999999999998662 346899999987221
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+.++.+. |++++++||+.++++.
T Consensus 165 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 165 ----FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred ----CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 1122379999999999998887764 8999999999999984
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-17 Score=151.71 Aligned_cols=154 Identities=17% Similarity=0.112 Sum_probs=117.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----C-CC-C------------ceeeecccccCCCH----HHHHHHHhcc--
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----D-DE-T------------WIFVSSKEADLSNL----ESTQQLFSKY-- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~-~~-~------------~~~~~~~~~Dl~~~----~~~~~~~~~~-- 58 (358)
.|+||||||+|+||+++++.|+++|++ . .. . ...+.++.+|++|+ +++.++++..
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 90 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR 90 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHH
Confidence 468999999999999999999999973 1 10 0 11245568999999 8888887643
Q ss_pred ---CCcEEEEcccccCCcc---ccc-----------cchhhHHHHHHHHHHHHHHHHHhc---CC------CEEEEeecc
Q psy7590 59 ---KPTHVIHLAAMVGGLF---HNM-----------SHNLDFFRVNMKINDNVLDTSYKQ---GV------KKVVSCLST 112 (358)
Q Consensus 59 ---~~d~Vih~a~~~~~~~---~~~-----------~~~~~~~~~nv~~~~~ll~aa~~~---~v------~r~V~~SS~ 112 (358)
++|+|||+|+...... ... +.....+++|+.++.++++++... +. .++|++||.
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~ 170 (276)
T 1mxh_A 91 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA 170 (276)
T ss_dssp HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred hcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECch
Confidence 6999999999753211 111 334568999999999999999874 33 699999999
Q ss_pred ceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 113 CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 113 ~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
..+... +....|+.+|...+.+.+.++.+. |+.+++++|+.+.++
T Consensus 171 ~~~~~~----------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 171 MTDLPL----------------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp GGGSCC----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred hhcCCC----------------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 765321 122379999999999998887664 899999999999988
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.4e-17 Score=154.85 Aligned_cols=154 Identities=17% Similarity=0.122 Sum_probs=120.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----CCC---------------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----DDE---------------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----~~~---------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.++||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. +
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 128 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGG 128 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999974 000 0123456689999999998887642 6
Q ss_pred CcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhcCCC--EEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 60 PTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQGVK--KVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 60 ~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~--r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|++||+|+..... ....++....+++|+.++.++++++...-.+ ++|++||...+...
T Consensus 129 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~--------------- 193 (294)
T 3r3s_A 129 LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS--------------- 193 (294)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC---------------
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC---------------
Confidence 99999999974311 1123445779999999999999999876544 99999999776422
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++.+. |+++.+++|+.|.++
T Consensus 194 -~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 235 (294)
T 3r3s_A 194 -PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTA 235 (294)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccc
Confidence 222379999999999998887764 899999999999875
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.1e-16 Score=147.16 Aligned_cols=155 Identities=20% Similarity=0.186 Sum_probs=117.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc------cCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK------YKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~------~~~ 60 (358)
.++||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++. .++
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 100 (273)
T 1ae1_A 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKL 100 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCC
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999974 1100 11345568999999999888753 369
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|++||+|+...... ...++....+++|+.++.++++++. +.+..++|++||...+...
T Consensus 101 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~--------------- 165 (273)
T 1ae1_A 101 NILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL--------------- 165 (273)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC---------------
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC---------------
Confidence 99999999753211 1223456688899999999999884 4456799999999776422
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
|....|+.+|...+.+.+.++.+. |+++++++|+.++++.
T Consensus 166 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (273)
T 1ae1_A 166 -PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208 (273)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence 122379999999999998887654 8999999999999875
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=2.7e-17 Score=149.27 Aligned_cols=151 Identities=14% Similarity=0.083 Sum_probs=119.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc-------CCCC-----------ceeeecccccCCCH-HHHHHHHhcc----
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR-------DDET-----------WIFVSSKEADLSNL-ESTQQLFSKY---- 58 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~-----------~~~~~~~~~Dl~~~-~~~~~~~~~~---- 58 (358)
++.|+|+||||+|+||++++++|+++|++ .... ...+.++.+|++|+ +++.++++..
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 34578999999999999999999999973 1100 12455678999998 8888777642
Q ss_pred -CCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-------CCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 -KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-------VKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-------v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|+|||+|+... .++....+++|+.++.++++++...- ..++|++||...+...
T Consensus 83 g~id~lv~~Ag~~~-----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 145 (254)
T 1sby_A 83 KTVDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------------ 145 (254)
T ss_dssp SCCCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------
T ss_pred CCCCEEEECCccCC-----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC------------
Confidence 6999999999753 36678899999999999999987532 2479999999776321
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...|.+.+.++.. .|+++++++|+.+.++
T Consensus 146 ----~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1sby_A 146 ----HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp ----TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCc
Confidence 12237999999999999888765 5899999999999876
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.1e-17 Score=152.42 Aligned_cols=154 Identities=16% Similarity=0.173 Sum_probs=116.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.++||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|++|
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 106 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLV 106 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999999999999999999999984 1000 012344589999999998888753 699999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+|+...... ...+.....+++|+.++..+.+++.. .+..++|++||...+... +..
T Consensus 107 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~ 170 (277)
T 4dqx_A 107 NNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI----------------ADR 170 (277)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC----------------TTB
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC----------------CCC
Confidence 9999753211 12234566888999999988888853 445599999998765321 222
Q ss_pred cchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...+.+.+.++.+. |+++.+++|+.+..+
T Consensus 171 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 209 (277)
T 4dqx_A 171 TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSP 209 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 379999999999998887664 899999999988754
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-17 Score=148.54 Aligned_cols=154 Identities=16% Similarity=0.081 Sum_probs=118.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-------c------CCC-----------CceeeecccccCCCHHHHHHHHhcc--
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-------R------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-- 58 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-------~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-- 58 (358)
|+||||||+|+||++++++|+++|+ + ... ....+.++.+|++|++++.++++..
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 82 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence 5899999999999999999999987 3 100 0123556789999999998888642
Q ss_pred ---CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccc
Q psy7590 59 ---KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 59 ---~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
++|+|||+|+..... ....++....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 152 (244)
T 2bd0_A 83 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---------- 152 (244)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred hCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC----------
Confidence 699999999975321 112345567899999999999998853 456799999999776421
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...|.+++.++.. .|++++++||+.++++.
T Consensus 153 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (244)
T 2bd0_A 153 ------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 195 (244)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh
Confidence 11227999999999998777653 58999999999999875
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=151.91 Aligned_cols=153 Identities=18% Similarity=0.198 Sum_probs=117.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.+++|||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVD 90 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCS
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 468999999999999999999999984 100 0123445689999999999888753 699
Q ss_pred EEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+|+..... ....++....+++|+.++.++++++... + .++|++||...+...
T Consensus 91 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------------- 154 (264)
T 3ucx_A 91 VVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQ--------------- 154 (264)
T ss_dssp EEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCC---------------
T ss_pred EEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCC---------------
Confidence 999999864211 1223445678999999999999887543 3 589999998765321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++.+ .|+++.+++|+.|+++
T Consensus 155 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 196 (264)
T 3ucx_A 155 -AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGG 196 (264)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSH
T ss_pred -CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccc
Confidence 22237999999999999888776 5899999999999876
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.7e-17 Score=149.31 Aligned_cols=152 Identities=18% Similarity=0.132 Sum_probs=116.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~~~~ 73 (358)
|+||||||+|.||++|++.|+++|++ ...... ...+.+|++|++++.++++.. ++|+|||+|+.....
T Consensus 23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~ 101 (251)
T 3orf_A 23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGG 101 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCB
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC
Confidence 58999999999999999999999984 221111 123478899999999888753 689999999974321
Q ss_pred ----cccccchhhHHHHHHHHHHHHHHHHHhcCC--CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHH
Q psy7590 74 ----FHNMSHNLDFFRVNMKINDNVLDTSYKQGV--KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRML 147 (358)
Q Consensus 74 ----~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 147 (358)
....++....+++|+.++.++++++...-. .++|++||...+.. .+....|+.+|...
T Consensus 102 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------------~~~~~~Y~~sKaa~ 165 (251)
T 3orf_A 102 NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR----------------TSGMIAYGATKAAT 165 (251)
T ss_dssp CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC----------------CTTBHHHHHHHHHH
T ss_pred CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC----------------CCCCchhHHHHHHH
Confidence 122345567889999999999999987532 38999999876521 12223799999999
Q ss_pred HHHHHHHHhh-----cCceEEEEecCcccCC
Q psy7590 148 DVLNKAYYQQ-----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 148 E~~~~~~~~~-----~g~~~~ilRp~~v~G~ 173 (358)
+.+.+.++.+ .|+.+.+++|+.|..+
T Consensus 166 ~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~ 196 (251)
T 3orf_A 166 HHIIKDLASENGGLPAGSTSLGILPVTLDTP 196 (251)
T ss_dssp HHHHHHHTSTTSSSCTTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHHhcccCCCcEEEEEecCcCcCc
Confidence 9999998877 4799999999988643
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.4e-18 Score=155.08 Aligned_cols=155 Identities=14% Similarity=0.002 Sum_probs=118.7
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHcccc------CCCC---c-------eeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKR------DDET---W-------IFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~------~~~~---~-------~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+ |+||+++++.|+++|++ .... . ....++.+|++|++++.++++.. ++
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 88 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF 88 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999 99999999999999974 1100 0 01245689999999998888743 68
Q ss_pred cEEEEcccccCC-----c--c-ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccC
Q psy7590 61 THVIHLAAMVGG-----L--F-HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 61 d~Vih~a~~~~~-----~--~-~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
|+|||+|+.... . . ...++....+++|+.++.++++++...- -.++|++||...+...
T Consensus 89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------ 156 (265)
T 1qsg_A 89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI------------ 156 (265)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------------
T ss_pred CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC------------
Confidence 999999997531 0 0 2234556789999999999999998752 2489999998664211
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
|....|+.+|...+.+.+.++.+. |+++++++|+.++++.
T Consensus 157 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 157 ----PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp ----TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 112279999999999999887764 8999999999998875
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-17 Score=150.76 Aligned_cols=216 Identities=15% Similarity=0.066 Sum_probs=140.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.++||||||+|.||++++++|+++|++ .... ...+..+.+|++|++++.++++.. ++|+||
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 88 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILV 88 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 468999999999999999999999974 1100 012345689999999998888753 699999
Q ss_pred EcccccCCcc----ccccchhhHHHHHHHHHHHHHHHHHhcC--------CCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 65 HLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLDTSYKQG--------VKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 65 h~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~aa~~~~--------v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|+|+...... ...++....+++|+.++.++++++...- ..++|++||...+..
T Consensus 89 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--------------- 153 (261)
T 3n74_A 89 NNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP--------------- 153 (261)
T ss_dssp ECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC---------------
T ss_pred ECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC---------------
Confidence 9999754111 1234456688999999998888875431 236999999865421
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhccc
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRA 209 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (358)
.|....|+.+|...+.+.+.++.+ .|+.+.+++|+.+..+.... +.....
T Consensus 154 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----------~~~~~~---------------- 206 (261)
T 3n74_A 154 -RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTT----------FMGEDS---------------- 206 (261)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------------
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhh----------hcccCc----------------
Confidence 122237999999999999888776 48999999999887764321 100000
Q ss_pred CCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccH
Q psy7590 210 RFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTI 288 (358)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~ 288 (358)
......+....+...+++.+|+|+++++++..... ..++++++.++..++-
T Consensus 207 ----------------------------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 207 ----------------------------EEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp --------------------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred ----------------------------HHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 00000111222334578999999999999865432 3456899998877654
Q ss_pred H
Q psy7590 289 A 289 (358)
Q Consensus 289 ~ 289 (358)
.
T Consensus 259 ~ 259 (261)
T 3n74_A 259 R 259 (261)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.4e-17 Score=152.28 Aligned_cols=156 Identities=18% Similarity=0.132 Sum_probs=119.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 120 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGAL 120 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999983 1100 023455689999999998887653 79
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|++||+|+...... ...++....+++|+.++.++++++. +.+..++|++||...+.. +
T Consensus 121 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~--------------~- 185 (293)
T 3rih_A 121 DVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT--------------G- 185 (293)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB--------------B-
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC--------------C-
Confidence 99999999754211 1234456789999999999999984 556679999999854210 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+....|+.+|...+.+.+.++.+ .|+++.+++|+.|+++.
T Consensus 186 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 229 (293)
T 3rih_A 186 YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229 (293)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcc
Confidence 112237999999999999888776 48999999999998763
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=5.4e-17 Score=147.09 Aligned_cols=155 Identities=15% Similarity=0.148 Sum_probs=115.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-CC--------ceeeecccccCCCHHHHHHHHhc-----cCCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-ET--------WIFVSSKEADLSNLESTQQLFSK-----YKPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-~~--------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~V 63 (358)
.|+||||||+|.||+++++.|+++|++ .. .. ...+..+.+|++|++++.++++. .++|+|
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDIL 86 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999999999974 22 11 11245568999999999888753 269999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHH----HHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDT----SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a----a~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+|+...... ...++....+++|+.++.++.++ +++.+..++|++||...+... |.
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~ 150 (249)
T 2ew8_A 87 VNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI----------------EA 150 (249)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC----------------SS
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC----------------CC
Confidence 99999753211 12234567899999998777777 455566799999999776421 12
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...|+.+|...+.+.+.++.+ .|+++++++|+.+.++.
T Consensus 151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (249)
T 2ew8_A 151 YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 191 (249)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCcc
Confidence 237999999999999888765 38999999999998764
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=152.84 Aligned_cols=155 Identities=17% Similarity=0.199 Sum_probs=118.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC----------CCceeeecccccCCCHHHHHHHHhc----cCCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD----------ETWIFVSSKEADLSNLESTQQLFSK----YKPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~----------~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~d~V 63 (358)
.++||||||+|.||+++++.|+++|++ .. .....+..+.+|++|++++.++.+. .++|++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~l 110 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVL 110 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEE
Confidence 368999999999999999999999984 10 0112455668999999988877542 269999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+|+...... ...++....+++|+.++.++++++. +.+..++|++||...+... +.
T Consensus 111 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----------------~~ 174 (273)
T 3uf0_A 111 VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG----------------RN 174 (273)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------SS
T ss_pred EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC----------------CC
Confidence 99999754211 1234456789999999999999874 4456799999998765321 12
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...|+.+|...+.+.+.++.+ .|+++.+++|+.|..+.
T Consensus 175 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (273)
T 3uf0_A 175 VAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN 215 (273)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 237999999999999988776 58999999999998764
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=3.3e-17 Score=148.89 Aligned_cols=154 Identities=16% Similarity=0.177 Sum_probs=115.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc--------eeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW--------IFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
+.|+||||||+|.||+++++.|+++|++ ..... ..+..+.+|++|++++.++++.. ++|+|
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3468999999999999999999999974 11000 12445689999999998888653 58999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHH----HHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDT----SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a----a~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+|+...... ...++....+++|+.++..+.++ +++.+ .++|++||...+... +.
T Consensus 85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~----------------~~ 147 (253)
T 1hxh_A 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI----------------EQ 147 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC----------------TT
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC----------------CC
Confidence 99999754211 12234567889998877666554 44556 799999999765321 22
Q ss_pred CcchHHHHHHHHHHHHHHHhh---c--CceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---H--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~--g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...|.+.+.++.+ . |++++++||+.++++
T Consensus 148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~ 189 (253)
T 1hxh_A 148 YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP 189 (253)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCc
Confidence 237999999999999888765 3 899999999999876
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.5e-17 Score=151.12 Aligned_cols=154 Identities=17% Similarity=0.169 Sum_probs=111.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc----C--CC------------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR----D--DE------------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~----~--~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+++|||||+|.||+++++.|+++|++ . .. ....+.++.+|++|++++.++++.. ++|
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 109 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRID 109 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999999999999974 0 00 0123456689999999998888743 699
Q ss_pred EEEEcccccCCc-----cccccchhhHHHHHHHHHHHHHHHHHhc----C---CCEEEEeeccceecCCCCCCCcccccc
Q psy7590 62 HVIHLAAMVGGL-----FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G---VKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 62 ~Vih~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~---v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++||+|+..... ....++....+++|+.++.++++++... + ..++|++||...+...
T Consensus 110 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------- 178 (280)
T 4da9_A 110 CLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS----------- 178 (280)
T ss_dssp EEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------------
T ss_pred EEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC-----------
Confidence 999999973210 1123455678889999999988887654 2 3489999998664221
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
|....|+.+|...+.+.+.++.+ .|+++.+++|+.|..+.
T Consensus 179 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 221 (280)
T 4da9_A 179 -----PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDM 221 (280)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCc
Confidence 12237999999999999988776 58999999999998764
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.2e-17 Score=150.23 Aligned_cols=154 Identities=17% Similarity=0.168 Sum_probs=117.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~~~ 72 (358)
+++||||||+|.||+++++.|+++|++ .......+..+.+|++|++++.++++.. ++|+|||+|+....
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~ 100 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKD 100 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 468999999999999999999999974 2222223456689999999998888652 58999999997532
Q ss_pred c---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 73 L---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 73 ~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
. ....++....+++|+.++.++++++.. .+..++|++||...+.. .|....|+.+|.
T Consensus 101 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------------~~~~~~Y~asK~ 164 (253)
T 2nm0_A 101 QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG----------------SAGQANYAASKA 164 (253)
T ss_dssp TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC----------------HHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC----------------CCCcHHHHHHHH
Confidence 1 123456678999999999999987754 35679999999865421 111227999999
Q ss_pred HHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 146 MLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 146 ~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..+.+.+.++.+ .|+++.+++|+.+..+
T Consensus 165 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~ 195 (253)
T 2nm0_A 165 GLVGFARSLARELGSRNITFNVVAPGFVDTD 195 (253)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEEEEECSBCC-
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCcCcCc
Confidence 999999888765 3799999999988655
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-17 Score=152.72 Aligned_cols=156 Identities=21% Similarity=0.193 Sum_probs=117.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.++||||||+|+||+++++.|+++|++ .... ...+.++.+|++|++++.++++.. +
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 111 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 111 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999974 1000 023455689999999998888642 6
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHH----HHHHHHHHHhcCC--CEEEEeeccceecCCCCCCCccccccC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKI----NDNVLDTSYKQGV--KKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~----~~~ll~aa~~~~v--~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
+|+|||+|+...... ...++....+++|+.+ ++.+++++++.++ .++|++||...+...
T Consensus 112 iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~------------ 179 (279)
T 1xg5_A 112 VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL------------ 179 (279)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC------------
Confidence 999999999753211 1223456789999999 7888888888875 699999999776321
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh-----cCceEEEEecCcccCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ-----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~-----~g~~~~ilRp~~v~G~ 173 (358)
+..+ ...|+.+|...+.+.+.++.+ .++++++++|+.|.++
T Consensus 180 -~~~~-~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 225 (279)
T 1xg5_A 180 -PLSV-THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ 225 (279)
T ss_dssp -SCGG-GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS
T ss_pred -CCCC-CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccch
Confidence 1112 227999999999888877654 4799999999988765
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.75 E-value=3.7e-17 Score=146.45 Aligned_cols=157 Identities=15% Similarity=0.057 Sum_probs=110.5
Q ss_pred CCCC-CEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-------eeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 1 MAEE-KIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-------IFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 1 m~~~-~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
|..| ++||||||+|+||++++++|+++|++ ..... ..+..+.+|++|++++.++++.. ++|
T Consensus 1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (234)
T 2ehd_A 1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELS 80 (234)
T ss_dssp ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4444 47999999999999999999999974 11000 03445689999999998887642 699
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHH----HHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLD----TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~----aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+|+..... ....++....+++|+.++.++++ .+++.+.+++|++||...+...
T Consensus 81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 144 (234)
T 2ehd_A 81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF---------------- 144 (234)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC----------------
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC----------------
Confidence 999999964321 11223456789999999975554 4556677899999998765321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++.+ .|++++++||+.+..+
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 186 (234)
T 2ehd_A 145 KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTG 186 (234)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCC
Confidence 12237999999999888777654 4899999999987644
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-17 Score=150.24 Aligned_cols=155 Identities=18% Similarity=0.190 Sum_probs=116.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.++||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|+
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDI 108 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 368999999999999999999999974 1000 013556689999999998888742 6999
Q ss_pred EEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCC----CEEEEeeccceecCCCCCCCccccccCC
Q psy7590 63 VIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGV----KKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 63 Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v----~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|||+|+..... ....++....+++|+.++.++++++. +.+. .++|++||...+...
T Consensus 109 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~------------- 175 (276)
T 2b4q_A 109 LVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM------------- 175 (276)
T ss_dssp EEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC-------------
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC-------------
Confidence 99999975421 11223456789999999988877764 3343 799999998765321
Q ss_pred CCCCCCc-chHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 132 PPHPSNF-GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 132 ~~~p~~~-~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
|... .|+.+|...+.+.+.++.+ .|+++.+++|+.+..+.
T Consensus 176 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 219 (276)
T 2b4q_A 176 ---GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219 (276)
T ss_dssp ---CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred ---CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence 1112 6999999999999888765 48999999999987663
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=7.6e-17 Score=147.17 Aligned_cols=158 Identities=15% Similarity=0.123 Sum_probs=119.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcc---cc------CCCCc----------eeeecccccCCCHHHHHHHHhcc-----
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEE---KR------DDETW----------IFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g---~~------~~~~~----------~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
++|+||||||+|+||++|+++|+++| ++ ..... ..+.++.+|+++++++.++++..
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 99 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK 99 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhcC
Confidence 46799999999999999999999998 53 22111 13456689999999998888743
Q ss_pred --CCcEEEEcccccC-C---ccccccchhhHHHHHHHHHHHHHHHHHhc----------C-----CCEEEEeeccceecC
Q psy7590 59 --KPTHVIHLAAMVG-G---LFHNMSHNLDFFRVNMKINDNVLDTSYKQ----------G-----VKKVVSCLSTCIFPD 117 (358)
Q Consensus 59 --~~d~Vih~a~~~~-~---~~~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~-----v~r~V~~SS~~vy~~ 117 (358)
++|+|||+|+... . .....++....+++|+.++.++++++... + ..++|++||...+..
T Consensus 100 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 179 (267)
T 1sny_A 100 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ 179 (267)
T ss_dssp GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred CCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccccc
Confidence 5999999999754 1 11123445678999999999999998654 2 468999999977643
Q ss_pred CCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 118 KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 118 ~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.. ..+....|+.+|...|.+++.++.+ .|+++++++|+.|..+
T Consensus 180 ~~-------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 225 (267)
T 1sny_A 180 GN-------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 225 (267)
T ss_dssp TC-------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred CC-------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecC
Confidence 21 1112237999999999999888776 5899999999988644
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=2.7e-17 Score=151.02 Aligned_cols=155 Identities=19% Similarity=0.153 Sum_probs=118.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC------CC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD------DE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~------~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|.||+++++.|+++|++- .. ....+..+.+|++|++++.++++.. ++
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i 107 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRL 107 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999740 00 0113445689999999999888753 69
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|++||+|+..... ....++....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 108 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 172 (269)
T 4dmm_A 108 DVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN--------------- 172 (269)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC---------------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC---------------
Confidence 9999999975421 112345567899999999999998743 455699999998654321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+ .|+++.+++|+.|..+.
T Consensus 173 -~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (269)
T 4dmm_A 173 -PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM 215 (269)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSC
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcc
Confidence 12237999999999888887765 48999999999998764
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=8.1e-17 Score=148.47 Aligned_cols=155 Identities=18% Similarity=0.205 Sum_probs=118.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ce---eeecccccCCCHHHHHHHHhcc-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WI---FVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~---~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
.|+||||||+|.||+++++.|+++|++ .... .. .+.++.+|++|++++.++++..
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFG 85 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999984 1000 01 3456689999999998888642
Q ss_pred CCcEEEEcccccCCc-------cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCcccc
Q psy7590 59 KPTHVIHLAAMVGGL-------FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
++|+|||+|+..... ....+.....+++|+.++.++++++... + .++|++||...+...
T Consensus 86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 155 (280)
T 1xkq_A 86 KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA--------- 155 (280)
T ss_dssp CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC---------
T ss_pred CCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC---------
Confidence 699999999975321 1122345678999999999999988753 4 699999998765321
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+.++.+ .|+++++++|+.+.++.
T Consensus 156 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (280)
T 1xkq_A 156 ------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199 (280)
T ss_dssp ------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred ------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence 022237999999999999888754 48999999999998763
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=157.11 Aligned_cols=222 Identities=14% Similarity=0.127 Sum_probs=155.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C----------CCC-----------ceeeecccccCCCHHHHHHHHh
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D----------DET-----------WIFVSSKEADLSNLESTQQLFS 56 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~----------~~~-----------~~~~~~~~~Dl~~~~~~~~~~~ 56 (358)
.++||||||+|.||+++++.|+++|++ . ... ...+..+.+|++|++++.++++
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 106 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 468999999999999999999999974 1 000 1234566899999999988887
Q ss_pred cc-----CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcCC----------CEEEEeeccceecCC
Q psy7590 57 KY-----KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQGV----------KKVVSCLSTCIFPDK 118 (358)
Q Consensus 57 ~~-----~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v----------~r~V~~SS~~vy~~~ 118 (358)
.. ++|++||+|+..... ..+.++....+++|+.++..+++++...-. .++|++||...+...
T Consensus 107 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~ 186 (322)
T 3qlj_A 107 TAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS 186 (322)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC
Confidence 43 699999999975421 122345567899999999999998864311 389999998655221
Q ss_pred CCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHh
Q psy7590 119 TTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDT 195 (358)
Q Consensus 119 ~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 195 (358)
+....|+.+|...+.+.+.++.+ .|+.+.++.|+ +..+..... .....
T Consensus 187 ----------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~------~~~~~------ 237 (322)
T 3qlj_A 187 ----------------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETV------FAEMM------ 237 (322)
T ss_dssp ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCS------CCC--------
T ss_pred ----------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhh------hhhhh------
Confidence 11227999999999999888776 58999999998 543321110 00000
Q ss_pred hhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CC
Q psy7590 196 IEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VE 274 (358)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~ 274 (358)
. .......++..+|+|.++++++..... ..
T Consensus 238 ------------------------------------------~-------~~~~~~~~~~pedva~~v~~L~s~~~~~it 268 (322)
T 3qlj_A 238 ------------------------------------------A-------TQDQDFDAMAPENVSPLVVWLGSAEARDVT 268 (322)
T ss_dssp -------------------------------------------------------CCTTCGGGTHHHHHHHTSGGGGGCC
T ss_pred ------------------------------------------h-------ccccccCCCCHHHHHHHHHHHhCccccCCC
Confidence 0 001112346789999999999865432 23
Q ss_pred CceEEccCCCcc-----------------cHHHHHHHHHHHhCCCc
Q psy7590 275 PIILSVDEKDEV-----------------TIAEVAEAIANAFQFKG 303 (358)
Q Consensus 275 ~~v~n~~~~~~~-----------------s~~ei~~~i~~~~g~~~ 303 (358)
++++++.++... ++.|+++.+.+.+|.+.
T Consensus 269 G~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~ 314 (322)
T 3qlj_A 269 GKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKAR 314 (322)
T ss_dssp SCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSC
T ss_pred CCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccC
Confidence 457888776544 77999999999998543
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.7e-17 Score=146.86 Aligned_cols=155 Identities=14% Similarity=0.117 Sum_probs=117.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-ceeeecccccCCCHHHHHHHHhc-------cCCcEEEEccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-WIFVSSKEADLSNLESTQQLFSK-------YKPTHVIHLAA 68 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~~d~Vih~a~ 68 (358)
+.|+||||||+|+||+++++.|+++|++ .... ......+.+|++|++++.++++. .++|+|||+|+
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 81 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAG 81 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCc
Confidence 4578999999999999999999999984 2111 11234568999999998887763 27999999999
Q ss_pred ccCCc----cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 69 MVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 69 ~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
..... ....++....+++|+.++.++++++...- ..++|++||...+.. .+....|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~----------------~~~~~~Y~~ 145 (236)
T 1ooe_A 82 GWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP----------------TPSMIGYGM 145 (236)
T ss_dssp CCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC----------------CTTBHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC----------------CCCcHHHHH
Confidence 64321 11223456789999999999999998742 248999999876531 122237999
Q ss_pred HHHHHHHHHHHHHhhc-----CceEEEEecCcccCC
Q psy7590 143 AKRMLDVLNKAYYQQH-----GVTYTSVIPCNVFGP 173 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~-----g~~~~ilRp~~v~G~ 173 (358)
+|...+.+.+.++.+. |+++++++|+.+.++
T Consensus 146 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~ 181 (236)
T 1ooe_A 146 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 181 (236)
T ss_dssp HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc
Confidence 9999999999987764 499999999988654
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.4e-17 Score=148.78 Aligned_cols=156 Identities=15% Similarity=0.112 Sum_probs=117.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-----------eeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-----------IFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-----------~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|+||++++++|+++|++ ..... ..+.++.+|++|++++.++++.. ++|
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 113 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTID 113 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999874 21111 13456689999999998888652 599
Q ss_pred EEEEcccccCC-c----cccccchhhHHHHHHHH----HHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 62 HVIHLAAMVGG-L----FHNMSHNLDFFRVNMKI----NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 62 ~Vih~a~~~~~-~----~~~~~~~~~~~~~nv~~----~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|||+|+.... . ....++....+++|+.+ ++.+++++++.+.+++|++||...+... .
T Consensus 114 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------~ 180 (279)
T 3ctm_A 114 VFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN-------------I 180 (279)
T ss_dssp EEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---------------
T ss_pred EEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC-------------C
Confidence 99999997532 0 11223445688999999 6788888887788899999998654321 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
..+ ...|+.+|...|.+++.++.+. + .+.+++|+.+..+.
T Consensus 181 ~~~-~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~ 223 (279)
T 3ctm_A 181 PQL-QAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDI 223 (279)
T ss_dssp -CC-HHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTT
T ss_pred CCC-cccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccc
Confidence 112 2279999999999999987763 6 99999999998764
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.74 E-value=5.6e-17 Score=148.81 Aligned_cols=155 Identities=14% Similarity=0.098 Sum_probs=117.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|.||++++++|+++|++ ... ....+.++.+|+++++++.++++.. ++
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 108 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGL 108 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 368999999999999999999999974 110 0113456689999999998888743 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+...... ...++....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 109 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 173 (271)
T 4iin_A 109 SYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN--------------- 173 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---------------
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC---------------
Confidence 99999999754211 12344567899999999888887754 456699999998654221
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+ .|+.+.+++|+.+..+.
T Consensus 174 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (271)
T 4iin_A 174 -MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM 216 (271)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred -CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence 12237999999999999888776 58999999999887653
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=5.8e-17 Score=149.42 Aligned_cols=156 Identities=17% Similarity=0.111 Sum_probs=118.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC----C-------------C-------------CceeeecccccCCCHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD----D-------------E-------------TWIFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~----~-------------~-------------~~~~~~~~~~Dl~~~~~~~~ 53 (358)
.+++|||||+|.||+++++.|+++|++- . . ....+..+.+|++|++++.+
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 94 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE 94 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 3589999999999999999999999730 0 0 01123456799999999998
Q ss_pred HHhcc-----CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCC
Q psy7590 54 LFSKY-----KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTT 120 (358)
Q Consensus 54 ~~~~~-----~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~ 120 (358)
+++.. ++|++||+|+...... ...++....+++|+.++.++++++.. .+ ..++|++||...+...
T Consensus 95 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-- 172 (280)
T 3pgx_A 95 LVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT-- 172 (280)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC--
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC--
Confidence 88753 6999999999754211 12334566889999999999999843 33 4589999998765321
Q ss_pred CCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 121 ~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
|....|+.+|...+.+.+.++.+ .|+++.+++|+.+.++..
T Consensus 173 --------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 216 (280)
T 3pgx_A 173 --------------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI 216 (280)
T ss_dssp --------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred --------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCccc
Confidence 22237999999999999888776 589999999999998753
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.3e-17 Score=149.19 Aligned_cols=219 Identities=16% Similarity=0.045 Sum_probs=152.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|++|||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|++|
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 87 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLH 87 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 368999999999999999999999984 1110 123455689999999998877642 699999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+|+...... ...++....+++|+.++..+.+++...- -.++|++||...+... |....
T Consensus 88 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~ 151 (255)
T 4eso_A 88 INAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH----------------PGMSV 151 (255)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC----------------TTBHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC----------------CCchH
Confidence 9999754211 1334556789999999999999997642 2489999998765321 22237
Q ss_pred hHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
|+.+|...+.+.+.++.+. |+++..++|+.+..+...... ........+......
T Consensus 152 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~~~~~------------------ 209 (255)
T 4eso_A 152 YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAG----ITEAERAEFKTLGDN------------------ 209 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTT----SCHHHHHHHHHHHHH------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccccc----CChhhHHHHHHHHhc------------------
Confidence 9999999999998887764 899999999999887532211 111111111111111
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAE 290 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~e 290 (358)
. .+...+.+.+|+|+++++++.......++++++.+|...++.+
T Consensus 210 ---------------------~---------~p~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 210 ---------------------I---------TPMKRNGTADEVARAVLFLAFEATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp ---------------------H---------STTSSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred ---------------------c---------CCCCCCcCHHHHHHHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence 1 1122356889999999998875323345689999887665443
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.8e-17 Score=150.65 Aligned_cols=154 Identities=15% Similarity=0.118 Sum_probs=117.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|+||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|++|
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 108 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLV 108 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 368999999999999999999999984 1000 012345689999999998888753 799999
Q ss_pred EcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+|+..... ..+.++....+++|+.++.++++++.. .+..++|++||...+.. .+..
T Consensus 109 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~----------------~~~~ 172 (277)
T 3gvc_A 109 ANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA----------------VGGT 172 (277)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC----------------CTTB
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC----------------CCCc
Confidence 999975421 122345567899999999999888854 45568999999865421 1222
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...+.+.+.++.+ .|+++.+++|+.|.++
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 211 (277)
T 3gvc_A 173 GAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTP 211 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCc
Confidence 37999999999999887765 5899999999999865
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.3e-17 Score=147.89 Aligned_cols=154 Identities=14% Similarity=0.151 Sum_probs=117.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C-----CCCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D-----DETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAA 68 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~ 68 (358)
++||||||+|.||+++++.|+++|++ . ......+..+.+|++|++++.++++.. ++|++||+||
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg 96 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAG 96 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence 57999999999999999999999984 1 011113445689999999998888743 6999999999
Q ss_pred ccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 69 MVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 69 ~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
...... ...++....+++|+.++.++++++. +.+..++|++||...+... |....|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------------~~~~~Y~ 160 (266)
T 3p19_A 97 MMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF----------------PDHAAYC 160 (266)
T ss_dssp CCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----------------TTCHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC----------------CCCchHH
Confidence 754211 1223445689999999999777764 4566799999998765321 2223799
Q ss_pred HHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 142 HAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+|...+.+.+.++.+ .|+++.+++|+.|..+.
T Consensus 161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (266)
T 3p19_A 161 GTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccch
Confidence 9999999998888776 48999999999998764
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.3e-17 Score=149.77 Aligned_cols=154 Identities=14% Similarity=0.148 Sum_probs=116.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALN 107 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999984 1000 012344579999999998888743 699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++||+|+...... ...++....+++|+.++.++++++.. .+-.++|++||...+...
T Consensus 108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------- 171 (270)
T 3ftp_A 108 VLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN---------------- 171 (270)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------------
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC----------------
Confidence 9999999754211 12344567899999999999998853 344589999998655321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++.+ .|+++.+++|+.|..+
T Consensus 172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 213 (270)
T 3ftp_A 172 PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTD 213 (270)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 12237999999999888887766 4899999999988755
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.74 E-value=4.9e-17 Score=149.04 Aligned_cols=154 Identities=20% Similarity=0.179 Sum_probs=111.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|+||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|+||
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 106 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILV 106 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 368999999999999999999999974 1000 012445689999999998888642 699999
Q ss_pred EcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+|+..... ....++....+++|+.++..+.+++ ++.+..++|++||...+... +..
T Consensus 107 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~----------------~~~ 170 (266)
T 3grp_A 107 NNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN----------------PGQ 170 (266)
T ss_dssp ECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------------------CH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC----------------CCc
Confidence 999975421 1223455678999999966666555 44566799999998654211 122
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...+.+.+.++.+ .|+++.+++|+.+..+
T Consensus 171 ~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~ 209 (266)
T 3grp_A 171 TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSA 209 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCc
Confidence 37999999999888887765 3899999999998765
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-16 Score=147.00 Aligned_cols=216 Identities=16% Similarity=0.094 Sum_probs=151.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C-----------CCCceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D-----------DETWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~-----------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|.||+++++.|+++|++ . ......+..+.+|++|++++.++++.. ++|
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 87 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLD 87 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 368999999999999999999999984 0 001123456689999999998888742 699
Q ss_pred EEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+|+..... ..+.++....+++|+.++.++++++.. .+..++|++||...+.. +.
T Consensus 88 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------~~ 153 (280)
T 3tox_A 88 TAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA--------------GF 153 (280)
T ss_dssp EEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTB--------------CC
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcC--------------CC
Confidence 999999965311 122345667899999999999998754 34459999999866521 11
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRAR 210 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (358)
+....|+.+|...+.+.+.++.+. |+.+.+++|+.|..+....... ...+.....+. .
T Consensus 154 -~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~----~------------ 214 (280)
T 3tox_A 154 -AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLP--GAAPETRGFVE----G------------ 214 (280)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGST--TCCTHHHHHHH----T------------
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhcc--ccCHHHHHHHh----c------------
Confidence 122379999999999999887764 8999999999998875321000 00111221111 1
Q ss_pred CCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccH
Q psy7590 211 FPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTI 288 (358)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~ 288 (358)
. .+...+.+.+|+|+++++++..... ..++++++.+|..++.
T Consensus 215 ---------------------------~---------~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 215 ---------------------------L---------HALKRIARPEEIAEAALYLASDGASFVTGAALLADGGASVTK 257 (280)
T ss_dssp ---------------------------T---------STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred ---------------------------c---------CccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence 1 1123367899999999999976433 3456899998876654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.74 E-value=2e-17 Score=149.92 Aligned_cols=154 Identities=17% Similarity=0.158 Sum_probs=117.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
|++|||||+|.||+++++.|+++|++ .... ......+.+|++|++++.++++.. ++|++||
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 89 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVN 89 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 58999999999999999999999984 1000 012345689999999999888743 6999999
Q ss_pred cccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 66 LAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 66 ~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|+..... ....++....+++|+.++.++++++.. .+..++|++||...+... |...
T Consensus 90 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------------~~~~ 153 (248)
T 3op4_A 90 NAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN----------------AGQA 153 (248)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------------TTCH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC----------------CCCh
Confidence 99975421 112345567899999999999998854 455699999998654221 1223
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.|+.+|...+.+.+.++.+ .|+++.+++|+.+..+.
T Consensus 154 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 192 (248)
T 3op4_A 154 NYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 192 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCch
Confidence 7999999999888887765 48999999999987764
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=4.4e-17 Score=148.01 Aligned_cols=209 Identities=18% Similarity=0.229 Sum_probs=146.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|.||++++++|+++|++ .... ...+..+.+|++|++++.++++.. ++
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 92 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEI 92 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999974 1111 113445689999999998888753 68
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|+|||+|+...... ...++....+++|+.++.++++++ ++.+..++|++||...+...
T Consensus 93 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 157 (256)
T 3ezl_A 93 DVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ--------------- 157 (256)
T ss_dssp EEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC---------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC---------------
Confidence 99999999754211 123445678999999988877766 44566799999998654321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRAR 210 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (358)
+....|+.+|...+.+.+.++.+ .|+.+.+++|+.+..+... ...+.+...+..
T Consensus 158 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------~~~~~~~~~~~~---------------- 214 (256)
T 3ezl_A 158 -FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK------AIRPDVLEKIVA---------------- 214 (256)
T ss_dssp -SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH------TSCHHHHHHHHH----------------
T ss_pred -CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccc------ccCHHHHHHHHh----------------
Confidence 12237999999999888887765 4899999999988765321 112233332221
Q ss_pred CCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcc
Q psy7590 211 FPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEV 286 (358)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~ 286 (358)
.. +...+.+.+|+|+++++++..... ..++++++.+|..+
T Consensus 215 ---------------------------~~---------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 215 ---------------------------TI---------PVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp ---------------------------HS---------TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred ---------------------------cC---------CCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence 11 112356889999999999865432 34568999877543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.74 E-value=6.3e-17 Score=149.60 Aligned_cols=156 Identities=13% Similarity=-0.044 Sum_probs=119.4
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHcccc------CCC---C-------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKR------DDE---T-------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~------~~~---~-------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+ |+||+++++.|+++|++ ... . ...+..+.+|++|++++.++++.. ++
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 100 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL 100 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999 99999999999999974 111 0 011345689999999998888743 69
Q ss_pred cEEEEcccccCC------c-cccccchhhHHHHHHHHHHHHHHHHHhcCC---CEEEEeeccceecCCCCCCCccccccC
Q psy7590 61 THVIHLAAMVGG------L-FHNMSHNLDFFRVNMKINDNVLDTSYKQGV---KKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 61 d~Vih~a~~~~~------~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
|+|||+|+.... . ....++....+++|+.++.++++++...-. .++|++||...+...
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 168 (285)
T 2p91_A 101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV------------ 168 (285)
T ss_dssp CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC------------
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC------------
Confidence 999999997531 0 122344567899999999999999987532 599999998654211
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
|....|+.+|...+.+.+.++.+. |+++++++|+.+.++..
T Consensus 169 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 212 (285)
T 2p91_A 169 ----PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAA 212 (285)
T ss_dssp ----TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchh
Confidence 112279999999999998887664 89999999999998753
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=146.52 Aligned_cols=154 Identities=19% Similarity=0.206 Sum_probs=115.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.++||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. +
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 92 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGR 92 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999974 1000 123445689999999998888643 6
Q ss_pred CcEEEEcccccCC-c---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 60 PTHVIHLAAMVGG-L---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 60 ~d~Vih~a~~~~~-~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
+|+|||+|+.... . ....++....+++|+.++..+.+++ ++.+..++|++||...+...
T Consensus 93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------- 159 (267)
T 1iy8_A 93 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI------------- 159 (267)
T ss_dssp CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC-------------
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC-------------
Confidence 9999999997532 0 1122345678899998887655554 45566799999998654211
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++.+ .|+++.+++|+.+.++
T Consensus 160 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 201 (267)
T 1iy8_A 160 ---GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 201 (267)
T ss_dssp ---SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCc
Confidence 12237999999999998887665 4899999999998765
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=4.2e-17 Score=148.89 Aligned_cols=172 Identities=17% Similarity=0.105 Sum_probs=122.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHH-cccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKE-EEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~-~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
|+++++||||||+|+||+++++.|++ .|++ .... ...+.++.+|++|++++.++++..
T Consensus 1 ~~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 1 SSGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp -CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 56778999999999999999999999 8873 1000 113455689999999999888743
Q ss_pred -CCcEEEEcccccCCcccc---ccchhhHHHHHHHHHHHHHHHHHhcCC--CEEEEeeccceecC-CC----------CC
Q psy7590 59 -KPTHVIHLAAMVGGLFHN---MSHNLDFFRVNMKINDNVLDTSYKQGV--KKVVSCLSTCIFPD-KT----------TY 121 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~aa~~~~v--~r~V~~SS~~vy~~-~~----------~~ 121 (358)
++|+|||+|+........ ..+....+++|+.++.++++++..... .++|++||...+.. .. ..
T Consensus 81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T 1wma_A 81 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSE 160 (276)
T ss_dssp SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred CCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccc
Confidence 699999999975421111 234567899999999999999987632 38999999866531 00 11
Q ss_pred CCcccccc---------------CCCCCCCCcchHHHHHHHHHHHHHHHhh-------cCceEEEEecCcccCC
Q psy7590 122 PIDETMVH---------------NGPPHPSNFGYSHAKRMLDVLNKAYYQQ-------HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 122 ~~~E~~~~---------------~~~~~p~~~~Y~~sK~~~E~~~~~~~~~-------~g~~~~ilRp~~v~G~ 173 (358)
+++|+++. ..+..|.. .|+.+|...|.+++.++.+ .|+++++++|+.|..+
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~ 233 (276)
T 1wma_A 161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSS-AYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 233 (276)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSC-HHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred ccchhhhhhhhhhhhhhhcccccccCCCccc-hhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccC
Confidence 23332210 00122334 7999999999998887765 4899999999988654
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-16 Score=144.77 Aligned_cols=153 Identities=17% Similarity=0.124 Sum_probs=117.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
|+||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF 82 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 58999999999999999999999974 1111 113455689999999998888642 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----CC-CEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----GV-KKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v-~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|++||+|+...... ...++....+++|+.++.++++++... +. .++|++||...+...
T Consensus 83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 148 (258)
T 3a28_C 83 DVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF-------------- 148 (258)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC--------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC--------------
Confidence 99999999753211 123345678999999999999988763 55 799999998664321
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++.+ .|+++.+++|+.+..+
T Consensus 149 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 190 (258)
T 3a28_C 149 --PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG 190 (258)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCCh
Confidence 12237999999999999888765 3899999999988654
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.73 E-value=9.7e-17 Score=146.38 Aligned_cols=213 Identities=15% Similarity=0.123 Sum_probs=143.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEI 87 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999973 000 0112445689999999999888743 69
Q ss_pred cEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhcCCC--EEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 61 THVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQGVK--KVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 61 d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~--r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|++||+|+..... ....+.....+++|+.++.++++++...-.+ ++|++||...+.. ..
T Consensus 88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------~~ 152 (259)
T 3edm_A 88 HGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDG---------------GG 152 (259)
T ss_dssp EEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHC---------------CS
T ss_pred CEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccC---------------CC
Confidence 9999999865211 1122334678999999999999999876433 8999999876511 11
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcC--ceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHG--VTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFP 212 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (358)
+....|+.+|...+.+.+.++.+.+ +.+..+.|+.+..+...... -+....
T Consensus 153 ~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~-----~~~~~~---------------------- 205 (259)
T 3edm_A 153 PGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT-----KPEVRE---------------------- 205 (259)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------------------
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc-----ChHHHH----------------------
Confidence 1223799999999999998887754 89999999988765322100 000000
Q ss_pred CCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccH
Q psy7590 213 PGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTI 288 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~ 288 (358)
......+...+.+.+|+|+++++++..... ..++++++.++...+.
T Consensus 206 ------------------------------~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 206 ------------------------------RVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSE 252 (259)
T ss_dssp ---------------------------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC-
T ss_pred ------------------------------HHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCC
Confidence 011112234467899999999999876433 3446899987765443
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1e-16 Score=146.71 Aligned_cols=155 Identities=15% Similarity=0.079 Sum_probs=118.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccC-----CC-------------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRD-----DE-------------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~-----~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
++||||||+|.||++++++|+++|++- .. ....+.++.+|++|++++.++++.. ++|
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 106 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWY 106 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 579999999999999999999999730 00 0123456689999999998888743 699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH-----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY-----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~-----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+...... ...++....+++|+.++.++++++. +.+..++|++||...+...
T Consensus 107 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 171 (267)
T 4iiu_A 107 GVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN--------------- 171 (267)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC---------------
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC---------------
Confidence 9999999754211 2334567789999999999999874 4555699999998654321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
+....|+.+|...+.+.+.++.+. |+++.+++|+.+..+..
T Consensus 172 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 215 (267)
T 4iiu_A 172 -RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMI 215 (267)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTC
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcc
Confidence 122379999998888887776654 89999999999987754
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.73 E-value=4.4e-17 Score=149.29 Aligned_cols=153 Identities=22% Similarity=0.233 Sum_probs=115.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc-CCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY-KPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vi 64 (358)
|++|||||+|.||+++++.|+++|++ ... ....+..+.+|+++++++.++++.. ++|++|
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv 90 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI 90 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 58999999999999999999999984 100 0123445689999999999998865 699999
Q ss_pred EcccccCCccc---cccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+|+....... ..++....+++|+.++..+.+++ ++.+..++|++||...+.. . +..
T Consensus 91 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------~-~~~ 154 (267)
T 3t4x_A 91 NNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMP---------------S-QEM 154 (267)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSC---------------C-TTC
T ss_pred ECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccC---------------C-Ccc
Confidence 99997542111 12334557899999977776655 4456669999999876532 1 222
Q ss_pred cchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...+.+.+.++.+. |+.+..+.|+.+..+
T Consensus 155 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (267)
T 3t4x_A 155 AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE 193 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence 379999999999999988764 699999999988654
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=3.6e-16 Score=141.37 Aligned_cols=155 Identities=16% Similarity=0.202 Sum_probs=116.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc------eeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW------IFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
+.|+||||||+|.||+++++.|+++|++ ..... ..+..+.+|++|++++.++++.. ++|+|||
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4578999999999999999999999984 11000 01455689999999998888652 5999999
Q ss_pred cccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 66 LAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 66 ~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|+...... ...++....+++|+.++.++.+++... +..++|++||...++. |...
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------------~~~~ 146 (245)
T 1uls_A 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-----------------LGQA 146 (245)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-----------------TTCH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCC-----------------CCch
Confidence 999753211 122344678899999999998888653 5679999999873321 1122
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.|+.+|...+.+.+.++.+ .|+++++++|+.+..+.
T Consensus 147 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 185 (245)
T 1uls_A 147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcc
Confidence 7999999999888887665 48999999999997664
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-16 Score=145.63 Aligned_cols=154 Identities=16% Similarity=0.080 Sum_probs=116.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|.||++++++|+++|++ ... ....+.++.+|++|++++.++++.. ++|
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 110 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 358999999999999999999999984 100 0123455689999999998888743 699
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+||..... ....++....+++|+.++.++++++.. .+ ..++|++||...+..
T Consensus 111 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------- 174 (301)
T 3tjr_A 111 VVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP---------------- 174 (301)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC----------------
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC----------------
Confidence 999999975321 122344567899999999999999754 33 458999999876532
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.|....|+.||...+.+.+.++.+. |+.+++++|+.|..+
T Consensus 175 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 217 (301)
T 3tjr_A 175 NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETK 217 (301)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSS
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccc
Confidence 1222379999999998888877654 899999999988654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.73 E-value=2.3e-16 Score=145.84 Aligned_cols=158 Identities=15% Similarity=0.069 Sum_probs=120.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C-----------CCCceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D-----------DETWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~-----------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|.||+++++.|+++|++ . ......+..+.+|++|++++.++++.. ++|
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLD 107 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 357999999999999999999999983 0 001123445689999999998888753 799
Q ss_pred EEEEcccccCC--c--cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGG--L--FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~--~--~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+|+.... . ....++....+++|+.++..+++++ ++.+..++|++||...+... .
T Consensus 108 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~--------------~ 173 (283)
T 3v8b_A 108 IVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF--------------T 173 (283)
T ss_dssp EEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC--------------C
T ss_pred EEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC--------------C
Confidence 99999997532 1 1122345678999999999999998 55566799999998654211 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
.|....|+.+|...+.+.+.++.+ .|+.+.+++|+.|..+..
T Consensus 174 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 218 (283)
T 3v8b_A 174 TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNIS 218 (283)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTT
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcc
Confidence 122337999999999999988876 479999999999987643
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.73 E-value=6.1e-17 Score=149.44 Aligned_cols=167 Identities=19% Similarity=0.138 Sum_probs=123.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------------------CceeeecccccCCCHHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------------------TWIFVSSKEADLSNLESTQQL 54 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------------------~~~~~~~~~~Dl~~~~~~~~~ 54 (358)
.++||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 89 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE 89 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 468999999999999999999999974 100 011344568999999999888
Q ss_pred Hhcc-----CCcEEEEcccccCCc-cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccc
Q psy7590 55 FSKY-----KPTHVIHLAAMVGGL-FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 55 ~~~~-----~~d~Vih~a~~~~~~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
++.. ++|++||+|+..... ....++....+++|+.++.++++++...- -.++|++||...+......+..+.
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~ 169 (287)
T 3pxx_A 90 LANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGG 169 (287)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC----
T ss_pred HHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccc
Confidence 8743 699999999975421 12334567899999999999999998753 348999999876543222222222
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
. +.+....|+.+|...+.+.+.++.+. |+.+.+++|+.|..+..
T Consensus 170 ~-----~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 216 (287)
T 3pxx_A 170 P-----QGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML 216 (287)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred c-----CCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence 2 11222379999999999999887775 89999999999988753
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=152.51 Aligned_cols=155 Identities=15% Similarity=0.080 Sum_probs=118.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
+.+++|||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. +
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 105 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGR 105 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999974 100 0113445689999999998888753 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+|+..... ..+.++....+++|+.++.++.+++.. .+..++|++||...+...
T Consensus 106 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 171 (277)
T 4fc7_A 106 IDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ-------------- 171 (277)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC--------------
T ss_pred CCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC--------------
Confidence 99999999964321 123345567899999999999998853 334589999998654321
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++.+. |+++.+++|+.|.++
T Consensus 172 --~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 213 (277)
T 4fc7_A 172 --ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT 213 (277)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred --CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence 122379999999999998887764 899999999999876
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.73 E-value=7.4e-17 Score=148.26 Aligned_cols=155 Identities=15% Similarity=0.114 Sum_probs=118.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.+++|||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVD 105 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 368999999999999999999999984 000 0123456689999999999888753 699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++||+|+...... ...++....+++|+.++.++.+++... +..++|++||...+.. .
T Consensus 106 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~----------------~ 169 (271)
T 4ibo_A 106 ILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA----------------R 169 (271)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB----------------C
T ss_pred EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC----------------C
Confidence 9999999753211 123445678999999999998877553 5569999999865321 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+ .|+++.+++|+.|..+.
T Consensus 170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (271)
T 4ibo_A 170 ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM 212 (271)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence 12237999999999999888776 48999999999988663
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=4.6e-17 Score=149.46 Aligned_cols=154 Identities=17% Similarity=0.172 Sum_probs=116.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-------ceeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
.++||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|++||
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 88 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVN 88 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 368999999999999999999999984 1000 012455689999999999888743 6999999
Q ss_pred cccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 66 LAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 66 ~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|+..... ....++....+++|+.++.++++++... +..++|++||...+... +...
T Consensus 89 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~ 152 (270)
T 1yde_A 89 NAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ----------------AQAV 152 (270)
T ss_dssp CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC----------------TTCH
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC----------------CCCc
Confidence 99975311 0122334678999999999999998642 24699999998543211 1122
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|+.+|...+.+.+.++.+ .|+++.+++|+.++++
T Consensus 153 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~ 190 (270)
T 1yde_A 153 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP 190 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred ccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccc
Confidence 7999999999999888765 5899999999999876
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=143.70 Aligned_cols=153 Identities=19% Similarity=0.149 Sum_probs=114.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
|+||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 82 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 58999999999999999999999974 1100 112445689999999998888742 6999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|||+|+...... ...++....+++|+.++.++++++.. .+ ..++|++||...+.. .
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~ 146 (256)
T 1geg_A 83 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG----------------N 146 (256)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC----------------C
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC----------------C
Confidence 999999643211 12234456899999999888877764 34 569999999865421 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++.+ .|+++++++|+.+.++
T Consensus 147 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 147 PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence 12237999999999998888765 4899999999998765
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.72 E-value=7.8e-17 Score=146.65 Aligned_cols=210 Identities=13% Similarity=0.110 Sum_probs=144.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----CceeeecccccCCCHHHHHHHHhcc----CCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----TWIFVSSKEADLSNLESTQQLFSKY----KPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~Vih~a~ 68 (358)
.+++|||||+|.||+++++.|+++|++ ... ....+.++.+|++|++++.++++.. ++|++||+|+
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg 88 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNCAG 88 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 468999999999999999999999984 100 0112455689999999998888642 6999999999
Q ss_pred ccCCc-------cccccchhhHHHHHHHHHHHHHHHHHhc------------CCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 69 MVGGL-------FHNMSHNLDFFRVNMKINDNVLDTSYKQ------------GVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 69 ~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~aa~~~------------~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
..... ..+.++....+++|+.++..+++++... +-.++|++||...+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 157 (257)
T 3tl3_A 89 TGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ----------- 157 (257)
T ss_dssp GSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH-----------
T ss_pred CCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC-----------
Confidence 74311 0233456788999999999999998763 23389999998665211
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhh
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFE 206 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (358)
+....|+.+|...+.+.+.++.+ .|+.+.+++|+.|..+.... ..+.....+ ..
T Consensus 158 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~------~~~~~~~~~----~~-------- 214 (257)
T 3tl3_A 158 -----IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS------LPEEARASL----GK-------- 214 (257)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---------CHHHHHHH----HH--------
T ss_pred -----CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh------ccHHHHHHH----Hh--------
Confidence 11227999999999888887665 48999999999997764321 111111111 11
Q ss_pred cccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcc
Q psy7590 207 SRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEV 286 (358)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~ 286 (358)
..+. ...+.+.+|+|+++++++... ...++++++.++..+
T Consensus 215 -------------------------------~~~~--------~~r~~~p~dva~~v~~l~s~~-~itG~~i~vdGG~~~ 254 (257)
T 3tl3_A 215 -------------------------------QVPH--------PSRLGNPDEYGALAVHIIENP-MLNGEVIRLDGAIRM 254 (257)
T ss_dssp -------------------------------TSSS--------SCSCBCHHHHHHHHHHHHHCT-TCCSCEEEESTTC--
T ss_pred -------------------------------cCCC--------CCCccCHHHHHHHHHHHhcCC-CCCCCEEEECCCccC
Confidence 1110 023578999999999999863 334558989887655
Q ss_pred c
Q psy7590 287 T 287 (358)
Q Consensus 287 s 287 (358)
.
T Consensus 255 ~ 255 (257)
T 3tl3_A 255 A 255 (257)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=143.37 Aligned_cols=154 Identities=15% Similarity=0.120 Sum_probs=116.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-ceeeecccccCCCHHHHHHHHhc-------cCCcEEEEccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-WIFVSSKEADLSNLESTQQLFSK-------YKPTHVIHLAA 68 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~~d~Vih~a~ 68 (358)
++|+||||||+|.||+++++.|+++|++ .... ......+.+|++|++++.++++. .++|+|||+|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag 85 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAG 85 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEccc
Confidence 3568999999999999999999999974 2111 11234568999999999888763 27999999999
Q ss_pred ccCCc----cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 69 MVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 69 ~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
..... ....++....+++|+.++..+++++...- -.++|++||...+... +....|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~Y~a 149 (241)
T 1dhr_A 86 GWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT----------------PGMIGYGM 149 (241)
T ss_dssp CCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC----------------TTBHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC----------------CCchHHHH
Confidence 75321 11223446788999999999999998742 2489999998765321 22237999
Q ss_pred HHHHHHHHHHHHHhhc-----CceEEEEecCcccC
Q psy7590 143 AKRMLDVLNKAYYQQH-----GVTYTSVIPCNVFG 172 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~-----g~~~~ilRp~~v~G 172 (358)
+|...+.+.+.++.+. |+++++++|+.+-.
T Consensus 150 sK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T 184 (241)
T 1dhr_A 150 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT 184 (241)
T ss_dssp HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccC
Confidence 9999999999887653 59999999987743
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=144.72 Aligned_cols=157 Identities=16% Similarity=0.135 Sum_probs=118.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
|++.++||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++..
T Consensus 1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 777789999999999999999999999984 100 0123445689999999998888643
Q ss_pred CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 59 KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
++|++||+||...... ...++....+++|+.++..+.+++.. .+..++|++||...+..
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~-------------- 146 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV-------------- 146 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc--------------
Confidence 6999999999754211 12344567899999999988887753 45569999999876532
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhc-CceEEEEecCcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQH-GVTYTSVIPCNVFGP 173 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~ 173 (358)
.+....|+.+|...+.+.+.++.+. |+++.++.||.|..+
T Consensus 147 --~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~ 187 (264)
T 3tfo_A 147 --VPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESE 187 (264)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCc
Confidence 1222379999999999999887765 899999999988655
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-16 Score=142.95 Aligned_cols=154 Identities=12% Similarity=0.040 Sum_probs=113.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~ 62 (358)
.++||||||+|.||+++++.|+++|++ .... ...+.++.+|++|++++.++++.. ++|+
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~ 86 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEV 86 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceE
Confidence 468999999999999999999999984 1111 124556789999999999888753 6899
Q ss_pred EEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 63 VIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 63 Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
+||+||..... ....++....+++|+.++..+.+++. +.+..++|++||...+.. .+
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------------~~ 150 (252)
T 3h7a_A 87 TIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRG----------------GS 150 (252)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCC----------------CT
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCC----------------CC
Confidence 99999975421 12234456789999999999888874 345569999999865421 12
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc---CceE-EEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH---GVTY-TSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~---g~~~-~ilRp~~v~G~ 173 (358)
....|+.+|...+.+.+.++.+. |+.+ .++.|+.+..+
T Consensus 151 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~ 192 (252)
T 3h7a_A 151 GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTA 192 (252)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCCh
Confidence 22379999999999998887664 7999 89999887654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=7.2e-17 Score=148.17 Aligned_cols=155 Identities=18% Similarity=0.098 Sum_probs=116.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|+||+++++.|+++|++ .... ...+.++.+|++|++++.++++.. ++|
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 110 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVS 110 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCc
Confidence 468999999999999999999999974 1000 113556689999999998888642 699
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|||+|+...... ...++....+++|+.++.++++++. +.+..++|++||...+...
T Consensus 111 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------- 174 (272)
T 1yb1_A 111 ILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV---------------- 174 (272)
T ss_dssp EEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH----------------
T ss_pred EEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC----------------
Confidence 9999999754211 1123445789999999777776664 4567799999999765321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc------CceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH------GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~------g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...|.+++.++.+. |+++++++|+.+.++.
T Consensus 175 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~ 220 (272)
T 1yb1_A 175 PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF 220 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence 112279999999999998887754 8999999999887764
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=5.8e-17 Score=146.99 Aligned_cols=152 Identities=16% Similarity=0.127 Sum_probs=109.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC---ceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccccCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET---WIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMVGGL 73 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~~~~ 73 (358)
.|+||||||+|+||+++++.|+++|++ .... ...+..+ +|+ .+++.++++.. ++|+|||+|+.....
T Consensus 19 ~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~D~--~~~~~~~~~~~~~iD~lv~~Ag~~~~~ 95 (249)
T 1o5i_A 19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV-CDL--RKDLDLLFEKVKEVDILVLNAGGPKAG 95 (249)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEE-CCT--TTCHHHHHHHSCCCSEEEECCCCCCCB
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCeEEE-eeH--HHHHHHHHHHhcCCCEEEECCCCCCCC
Confidence 578999999999999999999999974 1100 0123344 888 44555555543 699999999965321
Q ss_pred c---ccccchhhHHHHHHHHHHHH----HHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHH
Q psy7590 74 F---HNMSHNLDFFRVNMKINDNV----LDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRM 146 (358)
Q Consensus 74 ~---~~~~~~~~~~~~nv~~~~~l----l~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~ 146 (358)
. ...++....+++|+.++..+ ++.+++.+..++|++||...+... +....|+.+|..
T Consensus 96 ~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~Y~~sK~a 159 (249)
T 1o5i_A 96 FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI----------------ENLYTSNSARMA 159 (249)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------------TTBHHHHHHHHH
T ss_pred ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC----------------CCCchHHHHHHH
Confidence 1 12234567889999887655 455556677799999999876421 122379999999
Q ss_pred HHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 147 LDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 147 ~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+.+.+.++.+ .|+++++++|+.+.++.
T Consensus 160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (249)
T 1o5i_A 160 LTGFLKTLSFEVAPYGITVNCVAPGWTETER 190 (249)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence 99998887765 48999999999998774
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=4.6e-16 Score=142.57 Aligned_cols=154 Identities=19% Similarity=0.179 Sum_probs=116.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|.||+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 100 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKL 100 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999984 1100 112345689999999998888642 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccce-ecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCI-FPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~v-y~~~~~~~~~E~~~~~~~ 132 (358)
|+|||+|+...... ...++....+++|+.++.++++++. +.+..++|++||..+ +. +
T Consensus 101 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------------~ 165 (267)
T 1vl8_A 101 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV---------------T 165 (267)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC---------------C
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc---------------C
Confidence 99999999754211 1223345688999999999988874 345679999999863 21 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+....|+.+|...+.+.+.++.+ .|+++++++|+.+..+
T Consensus 166 -~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 208 (267)
T 1vl8_A 166 -MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTK 208 (267)
T ss_dssp -SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCST
T ss_pred -CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccc
Confidence 122237999999999999888765 4899999999998765
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.6e-16 Score=142.69 Aligned_cols=154 Identities=18% Similarity=0.100 Sum_probs=115.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|.||++++++|+++|++ ... ....+.++.+|+++++++.++++.. ++|
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 108 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCD 108 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999984 100 0124556789999999999888652 699
Q ss_pred EEEEcccccCC----ccccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGG----LFHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+.... .....++....+++|+.++.++++++.. .+..++|++||...+.. .
T Consensus 109 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---------------~ 173 (262)
T 3rkr_A 109 VLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP---------------V 173 (262)
T ss_dssp EEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC---------------C
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC---------------C
Confidence 99999997321 1122344567899999999999988754 55679999999876522 1
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+++.++.+ .|+++.+++|+.+..+
T Consensus 174 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 215 (262)
T 3rkr_A 174 -ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTE 215 (262)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCC
Confidence 12237999999999999888765 4899999999987644
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.6e-16 Score=143.01 Aligned_cols=155 Identities=16% Similarity=0.126 Sum_probs=118.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+|.||+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 108 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKL 108 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999974 1110 112445689999999998887642 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|+|||+|+...... ...++....+++|+.++.++++++... +..++|++||...+... .+
T Consensus 109 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------------~~ 173 (283)
T 1g0o_A 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA---------------VP 173 (283)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS---------------CS
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC---------------CC
Confidence 99999999754211 123455678999999999999999886 55699999998654211 11
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...+.+.+.++.+ .|+++.+++|+.+.++
T Consensus 174 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 174 KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence 1227999999999999888765 4899999999998765
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.71 E-value=1.9e-16 Score=142.59 Aligned_cols=155 Identities=19% Similarity=0.197 Sum_probs=115.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCc---eeeecccccCCCHHHHHHHHhc----c-CCcEEEEccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETW---IFVSSKEADLSNLESTQQLFSK----Y-KPTHVIHLAAMV 70 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~---~~~~~~~~Dl~~~~~~~~~~~~----~-~~d~Vih~a~~~ 70 (358)
|+||||||+|.||+++++.|+++|++ ..... ..+..+.+|+++ +++.++++. . ++|++||+|+..
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~ 81 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVN 81 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 58999999999999999999999974 11110 014456889998 777666542 1 699999999975
Q ss_pred CCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 71 GGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 71 ~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
... ....++....+++|+.++.++.+++. +.+..++|++||...+.... . +....|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------------~-~~~~~Y~~s 147 (239)
T 2ekp_A 82 VRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG-------------P-VPIPAYTTA 147 (239)
T ss_dssp CCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------------T-SCCHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC-------------C-CCCccHHHH
Confidence 321 11234456789999999999988884 45677999999997764320 1 122379999
Q ss_pred HHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 144 KRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 144 K~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
|...+.+.+.++.+. |+++++++|+.+.++.
T Consensus 148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 181 (239)
T 2ekp_A 148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181 (239)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCch
Confidence 999999998887764 8999999999997663
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-16 Score=145.27 Aligned_cols=155 Identities=17% Similarity=0.131 Sum_probs=115.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.+++|||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 106 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGV 106 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467999999999999999999999973 000 0112445689999999999888743 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|++||+||...... ...+.....+++|+.++.++++++...- -.++|++||...+... |
T Consensus 107 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~ 170 (267)
T 3u5t_A 107 DVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH----------------P 170 (267)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC----------------T
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC----------------C
Confidence 99999999754211 1122345678899999999999987652 2489999998654321 2
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
....|+.+|...+.+.+.++.+. |+.+.++.|+.+..+.
T Consensus 171 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (267)
T 3u5t_A 171 SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL 212 (267)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence 22379999999999999988874 8999999999887653
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=2.7e-16 Score=145.01 Aligned_cols=155 Identities=14% Similarity=0.033 Sum_probs=119.2
Q ss_pred CCEEEEEcCCCh--hHHHHHHHHHHcccc------CC---------CCceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGL--VGKAIEKIVKEEEKR------DD---------ETWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~--lG~~l~~~L~~~g~~------~~---------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.++||||||+|+ ||+++++.|+++|++ .. .....+.++.+|+++++++.++++.. ++|
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 105 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLD 105 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999988 999999999999984 11 01112456689999999999888753 689
Q ss_pred EEEEcccccCCcc--------ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 62 HVIHLAAMVGGLF--------HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 62 ~Vih~a~~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
+|||+|+...... ...++....+++|+.++.++++++... +..++|++||...+..
T Consensus 106 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~------------- 172 (280)
T 3nrc_A 106 AIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA------------- 172 (280)
T ss_dssp EEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC-------------
T ss_pred EEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC-------------
Confidence 9999999754210 233455678999999999999998764 2458999999876532
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+.++.+ .|+.+.+++|+.|..+.
T Consensus 173 ---~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (280)
T 3nrc_A 173 ---MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLA 216 (280)
T ss_dssp ---CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred ---CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence 122237999999999999887765 48999999999998764
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.71 E-value=5.4e-16 Score=140.77 Aligned_cols=204 Identities=16% Similarity=0.180 Sum_probs=140.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccC--CCHHHHHHHHhcc-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADL--SNLESTQQLFSKY----- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl--~~~~~~~~~~~~~----- 58 (358)
.++||||||+|.||+++++.|+++|++ .... ...+.++.+|+ ++++++.++++..
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g 91 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYP 91 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999984 1000 01334557899 8999888877643
Q ss_pred CCcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 KPTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|++||+|+..... ....++....+++|+.++..+++++ ++.+..++|++||...+..
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~------------- 158 (252)
T 3f1l_A 92 RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG------------- 158 (252)
T ss_dssp CCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSC-------------
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccC-------------
Confidence 699999999974311 1122334678999999999999998 4456679999999865421
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhcC--ceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcc
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQHG--VTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESR 208 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (358)
.+....|+.+|...+.+.+.++.+++ +.+..+.|+.+..+ +..... .
T Consensus 159 ---~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~--------------~~~~~~----~---------- 207 (252)
T 3f1l_A 159 ---RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA--------------MRASAF----P---------- 207 (252)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH--------------HHHHHC----T----------
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc--------------hhhhhC----C----------
Confidence 12223799999999999999888764 88899999877532 222111 0
Q ss_pred cCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCccc
Q psy7590 209 ARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVT 287 (358)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s 287 (358)
.. ....+...+|+|.++++++..... ..++++++.+|...+
T Consensus 208 -----------------------------~~---------~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~ 249 (252)
T 3f1l_A 208 -----------------------------TE---------DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPG 249 (252)
T ss_dssp -----------------------------TC---------CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC----
T ss_pred -----------------------------cc---------chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCC
Confidence 10 011246789999999999976533 344689998887666
Q ss_pred HH
Q psy7590 288 IA 289 (358)
Q Consensus 288 ~~ 289 (358)
+.
T Consensus 250 ~~ 251 (252)
T 3f1l_A 250 IS 251 (252)
T ss_dssp --
T ss_pred CC
Confidence 54
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.1e-16 Score=145.09 Aligned_cols=159 Identities=22% Similarity=0.253 Sum_probs=120.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc-------CCC-----------CceeeecccccCCCHHHHHHHHhcc----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR-------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
|++.++||||||+|.||++++++|+++|++ ... ....+..+.+|+++.+++.++++..
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 666789999999999999999999999973 000 0113445689999999888877642
Q ss_pred -------CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccc
Q psy7590 59 -------KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 59 -------~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
++|++||+|+...... ...+.....+++|+.++..+++++... +..++|++||...+..
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~--------- 154 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS--------- 154 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSC---------
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccC---------
Confidence 3899999999754211 122334567899999999999999875 2348999999866532
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
.|....|+.+|...+.+.+.++.+. |+.+.+++|+.+..+..
T Consensus 155 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~ 199 (255)
T 3icc_A 155 -------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMN 199 (255)
T ss_dssp -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSS
T ss_pred -------CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccch
Confidence 1222379999999999998887764 89999999999977643
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.5e-16 Score=142.96 Aligned_cols=157 Identities=20% Similarity=0.161 Sum_probs=119.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-C-----------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-E-----------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|++|||||+|.||+++++.|+++|++ .. . ....+..+.+|++|++++.++++.. ++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGL 110 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999974 00 0 0112345689999999998888743 69
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|++||+|+..... ....++....+++|+.++..+++++... +..++|++||..... .+.|
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~---------------~~~~ 175 (271)
T 3v2g_A 111 DILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL---------------VPWP 175 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC---------------CCST
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc---------------CCCC
Confidence 9999999975421 1123445678999999999999999875 345899999864321 1112
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
....|+.+|...+.+.+.++.+. |+++.+++|+.|..+..
T Consensus 176 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 218 (271)
T 3v2g_A 176 GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMN 218 (271)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSS
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcc
Confidence 23379999999999988887764 89999999999988754
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=4.6e-16 Score=144.69 Aligned_cols=156 Identities=12% Similarity=0.030 Sum_probs=119.9
Q ss_pred CCEEEEEcCCC--hhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTG--LVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG--~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+| .||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL 109 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 36899999998 9999999999999984 1100 011245689999999999888753 79
Q ss_pred cEEEEcccccCC-------ccccccchhhHHHHHHHHHHHHHHHHHhcCC--CEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGG-------LFHNMSHNLDFFRVNMKINDNVLDTSYKQGV--KKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+.... ...+.++....+++|+.++.++++++...-. .++|++||...+...
T Consensus 110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~------------- 176 (296)
T 3k31_A 110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV------------- 176 (296)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC-------------
T ss_pred CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC-------------
Confidence 999999997531 1123345677999999999999999987543 389999998664321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
+....|+.+|...+.+.+.++.+. |+.+.+++|+.|..+..
T Consensus 177 ---~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 220 (296)
T 3k31_A 177 ---PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLAS 220 (296)
T ss_dssp ---TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSC
T ss_pred ---CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchh
Confidence 122279999999999998887764 89999999999988753
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-16 Score=145.37 Aligned_cols=157 Identities=15% Similarity=0.101 Sum_probs=117.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.|+||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD 111 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGID 111 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 368999999999999999999999984 1111 012345689999999999888753 799
Q ss_pred EEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+|+...... ...+.....+++|+.++..+++++... + -.++|++||...+... .+
T Consensus 112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~-------------~~ 178 (276)
T 3r1i_A 112 IAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN-------------IP 178 (276)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------------CS
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC-------------CC
Confidence 9999999754211 122344567899999999999988653 3 2589999998654321 11
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+.. .|+.+|...+.+.+.++.+ .|+++.+++|+.|..+.
T Consensus 179 ~~~~-~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 221 (276)
T 3r1i_A 179 QQVS-HYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL 221 (276)
T ss_dssp SCCH-HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred CCcc-hHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 1222 7999999999999988776 58999999999998764
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.4e-16 Score=149.75 Aligned_cols=155 Identities=15% Similarity=0.022 Sum_probs=112.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.++||||||+|+||++|+++|+++|++ ... ....+..+.+|+++++++.++++.. +
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGP 87 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 358999999999999999999999984 100 0013455689999999999888753 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcC----------CCEEEEeeccceecCCCCCCCccc
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQG----------VKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~----------v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
+|+|||+|+..... ....++....+++|+.++.++++++.... ..++|++||...+...
T Consensus 88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~-------- 159 (319)
T 3ioy_A 88 VSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA-------- 159 (319)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC--------
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC--------
Confidence 89999999974321 11234456789999999999999886542 3479999999765321
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
|....|+.||...+.+.+.++.+ .|+.++++.|+.|.++.
T Consensus 160 --------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 202 (319)
T 3ioy_A 160 --------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI 202 (319)
T ss_dssp --------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred --------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence 12237999999555555544333 48999999999998764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=4.3e-16 Score=142.28 Aligned_cols=155 Identities=15% Similarity=0.022 Sum_probs=118.7
Q ss_pred CCEEEEEcCCCh--hHHHHHHHHHHcccc------CC------------CCceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 4 EKIILVTGGTGL--VGKAIEKIVKEEEKR------DD------------ETWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 4 ~~~VlItGatG~--lG~~l~~~L~~~g~~------~~------------~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
.++||||||+|+ ||+++++.|+++|++ .. .....+.++.+|++|++++.++++..
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG 86 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 468999999999 999999999999984 10 00113556689999999999888753
Q ss_pred CCcEEEEcccccCC-------ccccccchhhHHHHHHHHHHHHHHHHHhcCC--CEEEEeeccceecCCCCCCCcccccc
Q psy7590 59 KPTHVIHLAAMVGG-------LFHNMSHNLDFFRVNMKINDNVLDTSYKQGV--KKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 ~~d~Vih~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v--~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++|++||+|+.... ...+.+.....+++|+.++.++++++...-. .++|++||...+..
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------ 154 (266)
T 3oig_A 87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV------------ 154 (266)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC------------
T ss_pred CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc------------
Confidence 69999999997531 0122334567889999999999999987632 38999999866422
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+.++.+. |+++.+++|+.|..+.
T Consensus 155 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (266)
T 3oig_A 155 ----MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLS 198 (266)
T ss_dssp ----CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 1222379999999999998887754 8999999999998754
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=9.8e-17 Score=146.63 Aligned_cols=218 Identities=13% Similarity=0.057 Sum_probs=150.3
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+ |.||+++++.|+++|++ ... ....+.++.+|++|++++.++++.. ++
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 93 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWDSL 93 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCSCE
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999 99999999999999984 100 0012455689999999999888753 68
Q ss_pred cEEEEcccccCCc-------c-ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccC
Q psy7590 61 THVIHLAAMVGGL-------F-HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 61 d~Vih~a~~~~~~-------~-~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
|++||+|+..... . ...++....+++|+.++.++++++...- -.++|++||...+...
T Consensus 94 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------ 161 (271)
T 3ek2_A 94 DGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI------------ 161 (271)
T ss_dssp EEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------------
T ss_pred CEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC------------
Confidence 9999999975420 0 2334556789999999999999997752 2389999998664321
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhc
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFES 207 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (358)
|....|+.+|...+.+.+.++.+. |+.+.+++|+.|..+...... ..+.+...+ ..
T Consensus 162 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~----~~~~~~~~~----~~--------- 220 (271)
T 3ek2_A 162 ----PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK----SFGKILDFV----ES--------- 220 (271)
T ss_dssp ----TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH----HHHHHHHHH----HH---------
T ss_pred ----CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc----chHHHHHHH----Hh---------
Confidence 122279999999999998887754 899999999999876432110 011122211 11
Q ss_pred ccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcC-CCCCceEEccCCCcc
Q psy7590 208 RARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYD-SVEPIILSVDEKDEV 286 (358)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~-~~~~~v~n~~~~~~~ 286 (358)
.. +...+...+|+|+++++++.... ...++++++.+|..+
T Consensus 221 ------------------------------~~---------~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~ 261 (271)
T 3ek2_A 221 ------------------------------NS---------PLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNA 261 (271)
T ss_dssp ------------------------------HS---------TTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGG
T ss_pred ------------------------------cC---------CcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeee
Confidence 11 11235688999999999997643 234568999998887
Q ss_pred cHHHHHH
Q psy7590 287 TIAEVAE 293 (358)
Q Consensus 287 s~~ei~~ 293 (358)
++.++.+
T Consensus 262 ~~~~~~~ 268 (271)
T 3ek2_A 262 VVGGMAG 268 (271)
T ss_dssp BCCCC--
T ss_pred ehhhhhh
Confidence 7666543
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.70 E-value=3.8e-16 Score=143.00 Aligned_cols=154 Identities=19% Similarity=0.209 Sum_probs=117.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+||||||+|.||+++++.|+++|++ ... ....+.++.+|++|++++.++++.. ++
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 99 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGL 99 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999974 100 0123456689999999988887643 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|++||+|+...... ...++....+++|+.++..+++++... + ..++|++||...+...
T Consensus 100 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------- 165 (266)
T 4egf_A 100 DVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL-------------- 165 (266)
T ss_dssp SEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------------
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC--------------
Confidence 99999999754211 122345668899999999999888643 2 3489999998765321
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++.+ .|+++.+++|+.|..+
T Consensus 166 --~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 207 (266)
T 4egf_A 166 --PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTE 207 (266)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSH
T ss_pred --CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 22237999999999999888776 4899999999988765
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.1e-16 Score=142.74 Aligned_cols=154 Identities=15% Similarity=0.118 Sum_probs=114.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.+++|||||+|.||++++++|+++|++ .... ...+..+.+|++|++++.++++.. ++|++|
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lV 107 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLF 107 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 357999999999999999999999984 1000 013345689999999999888753 799999
Q ss_pred EcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhc----C--CCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 65 HLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 65 h~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|+||..... ....++....+++|+.++..+.+++... + -.++|++||...+.. .
T Consensus 108 nnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~----------------~ 171 (272)
T 4dyv_A 108 NNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP----------------R 171 (272)
T ss_dssp ECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC----------------C
T ss_pred ECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC----------------C
Confidence 999975321 1123445678999999988888877543 2 348999999865421 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+....|+.+|...+.+.+.++.+ .|+.+.+++|+.|..+
T Consensus 172 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 213 (272)
T 4dyv_A 172 PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTP 213 (272)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccCh
Confidence 22237999999999999888766 4899999999988765
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-18 Score=160.20 Aligned_cols=163 Identities=15% Similarity=0.101 Sum_probs=117.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccCC---CCceee---------------------ecccccCCCHHHHHHHHh
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDD---ETWIFV---------------------SSKEADLSNLESTQQLFS 56 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~~---~~~~~~---------------------~~~~~Dl~~~~~~~~~~~ 56 (358)
|.+.|||+||||+||+|++++..|++.|+... .....+ .+ .+|+.+.+++.++++
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~-~~di~~~~~~~~a~~ 79 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL-LAGLEATDDPKVAFK 79 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEEEEEESCHHHHTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc-cCCeEeccChHHHhC
Confidence 66678999999999999999999998874100 000000 11 135555556677777
Q ss_pred ccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CC-EEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 57 KYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 57 ~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++|+|||+|+.... ...++..+++.|+.+++++++++++.+ ++ ++|++|+..-- ..++.++.. ....
T Consensus 80 --~~D~Vih~Ag~~~~---~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~----~~~~~~~~~--~~~~ 148 (327)
T 1y7t_A 80 --DADYALLVGAAPRK---AGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANT----NALIAYKNA--PGLN 148 (327)
T ss_dssp --TCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH----HHHHHHHTC--TTSC
T ss_pred --CCCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhh----hHHHHHHHc--CCCC
Confidence 69999999997642 235677899999999999999999986 65 78877765300 011121110 0123
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
|.+ .|+.+|+..|++...+++..|++.+++|+++|||++..
T Consensus 149 p~~-~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 149 PRN-FTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp GGG-EEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred hhh-eeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 444 79999999999999999989999999999999998753
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.1e-16 Score=144.15 Aligned_cols=157 Identities=11% Similarity=-0.024 Sum_probs=119.8
Q ss_pred CCCCEEEEEcCC--ChhHHHHHHHHHHcccc------CCC---C-------ceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 2 AEEKIILVTGGT--GLVGKAIEKIVKEEEKR------DDE---T-------WIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 2 ~~~~~VlItGat--G~lG~~l~~~L~~~g~~------~~~---~-------~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
++.++||||||+ |.||+++++.|+++|++ ... . ...+..+.+|++|++++.++++..
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 345789999999 99999999999999974 211 0 011455689999999998888743
Q ss_pred CCcEEEEcccccCC------c-cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCcccccc
Q psy7590 59 KPTHVIHLAAMVGG------L-FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 ~~d~Vih~a~~~~~------~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++|++||+|+.... . ....++....+++|+.++.++++++...- -.++|++||...+..
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------ 151 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY------------ 151 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB------------
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC------------
Confidence 68999999997531 0 12234456789999999999999998761 148999999765421
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.+....|+.+|...+.+.+.++.+. |+++++++|+.|.++.
T Consensus 152 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 195 (275)
T 2pd4_A 152 ----MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 195 (275)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred ----CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence 1122279999999999998887765 8999999999998764
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.6e-15 Score=137.86 Aligned_cols=154 Identities=18% Similarity=0.118 Sum_probs=118.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc--c------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK--R------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~--~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
|++|||||+|.||+++++.|+++|. . .... ...+..+.+|++|++++.++++.. ++|++
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 82 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSL 82 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEE
Confidence 5899999999999999999999863 1 1100 113445689999999999888753 79999
Q ss_pred EEcccccCCc----cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 64 IHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 64 ih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
||+|+..... ..+.++....+++|+.++.++++++ ++.+ .++|++||...+.. .+
T Consensus 83 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~----------------~~ 145 (254)
T 3kzv_A 83 VANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY----------------FS 145 (254)
T ss_dssp EEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS----------------SC
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC----------------CC
Confidence 9999974321 1123345678999999999999998 4445 68999999866432 12
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc-CceEEEEecCcccCCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH-GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~G~~~ 175 (358)
....|+.+|...+.+.+.++.+. |+++..++|+.+..+..
T Consensus 146 ~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~ 186 (254)
T 3kzv_A 146 SWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQ 186 (254)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCS
T ss_pred CcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhH
Confidence 22379999999999999988775 89999999999987754
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.70 E-value=2.2e-16 Score=144.40 Aligned_cols=154 Identities=19% Similarity=0.151 Sum_probs=117.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|+||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|++|
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv 85 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVA 85 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 468999999999999999999999974 1100 023455689999999998888753 689999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+|+...... ...++....+++|+.++.++++++...- ..++|++||...++. |....
T Consensus 86 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------------~~~~~ 148 (263)
T 2a4k_A 86 HFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-----------------FGLAH 148 (263)
T ss_dssp EGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-----------------HHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC-----------------CCcHH
Confidence 9999754211 1123346688999999999999998753 348999999977621 11127
Q ss_pred hHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
|+.+|...+.+.+.++.+ .|+++++++|+.+.++.
T Consensus 149 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 186 (263)
T 2a4k_A 149 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM 186 (263)
T ss_dssp HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence 999999888888877665 38999999999998774
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.2e-15 Score=138.16 Aligned_cols=152 Identities=15% Similarity=0.101 Sum_probs=116.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCc--------eeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETW--------IFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
|++|||||+|.||+++++.|+++|++ ..... ..+..+.+|++|++++.++++.. ++|++||
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 47999999999999999999999974 11000 12445689999999999998753 6999999
Q ss_pred cccccC---C-ccccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 66 LAAMVG---G-LFHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 66 ~a~~~~---~-~~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
+||... + ...+.++....+++|+.++.++.+++. +.+..++|++||...+.. .|..
T Consensus 81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~----------------~~~~ 144 (248)
T 3asu_A 81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP----------------YAGG 144 (248)
T ss_dssp CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC----------------CTTC
T ss_pred CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC----------------CCCC
Confidence 999642 1 112234456789999999999888886 445679999999876432 1222
Q ss_pred cchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFG 172 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G 172 (358)
..|+.+|...+.+.+.++.+. |+++.+++|+.|.|
T Consensus 145 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 145 NVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 379999999999999887653 89999999999985
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-16 Score=144.07 Aligned_cols=156 Identities=17% Similarity=0.146 Sum_probs=119.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.+++|||||+|.||++++++|+++|++ ... ....+..+.+|++|++++.++++.. ++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 97 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHL 97 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999974 000 0123455689999999999888753 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcCCC--EEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQGVK--KVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~--r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|++||+|+...... ...++....+++|+.++.++++++...-.+ ++|++||..... ...|
T Consensus 98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------~~~~ 162 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD---------------FSVP 162 (270)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT---------------CCCT
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc---------------CCCC
Confidence 99999999754211 133455678999999999999999886544 999999975211 1112
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
....|+.+|...+.+.+.++.+ .|+++..++|+.+..+.
T Consensus 163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 204 (270)
T 3is3_A 163 KHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204 (270)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 2237999999999999888776 48999999999998763
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=6.9e-16 Score=143.34 Aligned_cols=155 Identities=12% Similarity=0.044 Sum_probs=118.0
Q ss_pred CCEEEEEcCCCh--hHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGL--VGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~--lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|+ ||+++++.|+++|++ ... ....+.++.+|++|++++.++++.. ++
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL 110 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999 999999999999974 100 0012445689999999999888753 69
Q ss_pred cEEEEcccccCC-------ccccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGG-------LFHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+.... .....++....+++|+.++..+++++...- -.++|++||...+...
T Consensus 111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------------- 177 (293)
T 3grk_A 111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM------------- 177 (293)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC-------------
T ss_pred CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC-------------
Confidence 999999997531 112334556789999999999999998753 2489999998765321
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.+|...+.+.+.++.+ .|+.+.+++|+.|..+.
T Consensus 178 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 220 (293)
T 3grk_A 178 ---PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA 220 (293)
T ss_dssp ---TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence 12227999999999999888766 38999999999998764
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.9e-16 Score=142.16 Aligned_cols=154 Identities=23% Similarity=0.228 Sum_probs=117.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|++|||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|++|
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 85 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILV 85 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 468999999999999999999999984 1000 112445689999999999888743 699999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcC-CCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
|+|+...... .+.++....+++|+.++.++.+++ ++.+ ..++|++||...+... |.
T Consensus 86 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~ 149 (247)
T 3rwb_A 86 NNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT----------------PN 149 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC----------------TT
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC----------------CC
Confidence 9999754211 123445678999999999998884 4444 5699999998655321 12
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...+.+.+.++.+ .|+++.+++|+.|..+
T Consensus 150 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 189 (247)
T 3rwb_A 150 MAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESD 189 (247)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 237999999999988888776 5899999999988765
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.69 E-value=8.2e-16 Score=137.48 Aligned_cols=154 Identities=21% Similarity=0.204 Sum_probs=114.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--------CceeeecccccCCCHHHHHHHHhcc--CCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------TWIFVSSKEADLSNLESTQQLFSKY--KPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~--~~d~Vih~a 67 (358)
||+||||||+|.||+++++.|+++|++ ... -...+.++.+|+++++++.++++.. ..|+|||+|
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 457999999999999999999999984 100 0123445689999999999999853 249999999
Q ss_pred cccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcCC---CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 68 AMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQGV---KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 68 ~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
+...... ...++....+++|+.++.++++++...-. .++|++||...+... +....|+
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~----------------~~~~~Y~ 144 (230)
T 3guy_A 81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK----------------AQESTYC 144 (230)
T ss_dssp CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC----------------TTCHHHH
T ss_pred CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC----------------CCCchhH
Confidence 9753211 12234567889999999999999876422 289999998765321 2223799
Q ss_pred HHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 142 HAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.+|...+.+.+.++.+. |+.+..+.|+.+..+
T Consensus 145 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 179 (230)
T 3guy_A 145 AVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATE 179 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---
T ss_pred HHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccCh
Confidence 99999999999988775 799999999887644
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=3.3e-16 Score=140.82 Aligned_cols=156 Identities=15% Similarity=0.079 Sum_probs=115.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
|.+++||||||+|.||++++++|+++|++ .... ...+..+.+|++|++++.++++.. ++|+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 34678999999999999999999999984 1100 012556689999999998888753 6999
Q ss_pred EEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcC---CCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 63 VIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQG---VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 63 Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~---v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
+||+||..... ....++....+++|+.++..+++++...- -.++|++||...+.. .|.
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~----------------~~~ 144 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG----------------KAN 144 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSS----------------CSS
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCC----------------CCC
Confidence 99999974321 12334567789999999999998885431 128999999865422 122
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|+.||...+.+.+.++.+ .|+.+.++.|+.+-.+
T Consensus 145 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 184 (235)
T 3l6e_A 145 ESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSE 184 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCC
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCc
Confidence 237999999999999988775 3799999999988544
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.68 E-value=8.6e-16 Score=141.49 Aligned_cols=209 Identities=14% Similarity=0.093 Sum_probs=143.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc----CCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY----KPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~Vih~ 66 (358)
++||||||+|.||+++++.|+++|++ .... ...+.++.+|++|++++.++++.. ++|++||+
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~ 110 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVA 110 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEEc
Confidence 47999999999999999999999984 1000 012455689999999999888742 58999999
Q ss_pred ccccCCcc---------ccccchhhHHHHHHHHHHHHHHHHHhc----------CCCEEEEeeccceecCCCCCCCcccc
Q psy7590 67 AAMVGGLF---------HNMSHNLDFFRVNMKINDNVLDTSYKQ----------GVKKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 67 a~~~~~~~---------~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~v~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
++...... ...+.....+++|+.++.++++++... +-.++|++||...+...
T Consensus 111 aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 181 (281)
T 3ppi_A 111 HGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ--------- 181 (281)
T ss_dssp CCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC---------
T ss_pred cCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC---------
Confidence 44322111 122235778999999999999988632 23489999999765321
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccch
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSV 204 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (358)
+....|+.+|...+.+.+.++.+. |+.+.+++|+.|..+.... ..+.....+. .
T Consensus 182 -------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~------~~~~~~~~~~----~------ 238 (281)
T 3ppi_A 182 -------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES------VGEEALAKFA----A------ 238 (281)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT------TCHHHHHHHH----H------
T ss_pred -------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc------ccHHHHHHHH----h------
Confidence 122379999999998888877664 8999999999886542110 1111222211 1
Q ss_pred hhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCC
Q psy7590 205 FESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKD 284 (358)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~ 284 (358)
..+. ...+.+.+|+|+++++++... ...++++++.++.
T Consensus 239 ---------------------------------~~~~--------~~~~~~pedvA~~v~~l~s~~-~~tG~~i~vdGG~ 276 (281)
T 3ppi_A 239 ---------------------------------NIPF--------PKRLGTPDEFADAAAFLLTNG-YINGEVMRLDGAQ 276 (281)
T ss_dssp ---------------------------------TCCS--------SSSCBCHHHHHHHHHHHHHCS-SCCSCEEEESTTC
T ss_pred ---------------------------------cCCC--------CCCCCCHHHHHHHHHHHHcCC-CcCCcEEEECCCc
Confidence 1110 123678999999999999863 3344589898876
Q ss_pred ccc
Q psy7590 285 EVT 287 (358)
Q Consensus 285 ~~s 287 (358)
.++
T Consensus 277 ~~~ 279 (281)
T 3ppi_A 277 RFT 279 (281)
T ss_dssp CCC
T ss_pred ccC
Confidence 654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.3e-15 Score=134.81 Aligned_cols=154 Identities=17% Similarity=0.093 Sum_probs=113.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
|++||||||+|.||++++++|+++|++ ... ....+.++.+|++|++++.++++.. ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999999973 100 0123445689999999999888743 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|++||+|+...... .+.++....+++|+.++.++++++... +..++|++||...+.. .
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~----------------~ 145 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARL----------------I 145 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSC----------------C
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhccc----------------C
Confidence 99999999754211 133455678999999999999998652 2346777777644321 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh-cCceEEEEecCcccCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ-HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~-~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.+... .|+++.+++|+.+-.+
T Consensus 146 ~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~ 185 (235)
T 3l77_A 146 PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTY 185 (235)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSS
T ss_pred CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccc
Confidence 12237999999999999887443 4899999999988654
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-15 Score=139.67 Aligned_cols=154 Identities=13% Similarity=0.038 Sum_probs=117.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-------------CCceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-------------ETWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-------------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.+++|||||+|.||+++++.|+++|++ .. .....+..+.+|++|++++.++++.. +
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGC 87 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 368999999999999999999999984 10 00112455689999999998888653 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+|+..... ....++....+++|+.++.++.+++.. .+..++|++||...+..
T Consensus 88 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------- 152 (265)
T 3lf2_A 88 ASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQP--------------- 152 (265)
T ss_dssp CSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSC---------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCC---------------
Confidence 99999999975321 122344567899999999999999864 33458999999866422
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+.+.++.+. |+++.+++|+.+..+
T Consensus 153 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 195 (265)
T 3lf2_A 153 -EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESG 195 (265)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -CCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCc
Confidence 1222389999999999998887764 899999999988764
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=7.8e-15 Score=135.48 Aligned_cols=156 Identities=16% Similarity=0.121 Sum_probs=118.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC---------------------------CCceeeecccccCCCHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD---------------------------ETWIFVSSKEADLSNLES 50 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~---------------------------~~~~~~~~~~~Dl~~~~~ 50 (358)
.+++|||||+|.||+++++.|+++|++ .. .....+..+.+|++|+++
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 90 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDA 90 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHH
Confidence 468999999999999999999999974 10 001234556899999999
Q ss_pred HHHHHhcc-----CCcEEEEcccccCCcc----ccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceec
Q psy7590 51 TQQLFSKY-----KPTHVIHLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFP 116 (358)
Q Consensus 51 ~~~~~~~~-----~~d~Vih~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~ 116 (358)
+.++++.. ++|++||+|+...... .+.++....+++|+.++.++++++... + ..++|++||...+.
T Consensus 91 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 170 (286)
T 3uve_A 91 LKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK 170 (286)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhcc
Confidence 98888642 6999999999754211 123445678999999999999988653 2 34899999987653
Q ss_pred CCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCCC
Q psy7590 117 DKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 117 ~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~ 175 (358)
. .|....|+.+|...+.+.+.++.+ .|+.+.++.|+.|..+..
T Consensus 171 ~----------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~ 216 (286)
T 3uve_A 171 A----------------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPML 216 (286)
T ss_dssp C----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTT
T ss_pred C----------------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcc
Confidence 2 122237999999999999888776 489999999999987743
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.68 E-value=2.3e-16 Score=144.20 Aligned_cols=152 Identities=16% Similarity=0.130 Sum_probs=112.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC--------------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
++||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. +
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 91 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGK 91 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 58999999999999999999999974 100 0123556789999999999888742 6
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|++||+|+...... ...++....+++|+.++..+++++... +..++|++||...+... +
T Consensus 92 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~-------------~-- 156 (262)
T 3ksu_A 92 VDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT-------------G-- 156 (262)
T ss_dssp EEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH-------------C--
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC-------------C--
Confidence 999999999754211 122345668899999999999999875 34589999998665321 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFG 172 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G 172 (358)
....|+.+|...+.+.+.++.+. |+.+.++.|+.|..
T Consensus 157 -~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T 196 (262)
T 3ksu_A 157 -FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDT 196 (262)
T ss_dssp -CCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCT
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcC
Confidence 11279999999999999988775 89999999987754
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.4e-15 Score=140.91 Aligned_cols=154 Identities=16% Similarity=0.135 Sum_probs=119.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc---c------CCC-------------CceeeecccccCCCHHHHHHHHhcc---
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK---R------DDE-------------TWIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~---~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
.++||||||+|.||+++++.|+++|+ + ... ....+..+.+|++|++++.++++..
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 112 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQE 112 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGG
T ss_pred CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 46899999999999999999999886 2 100 0123556689999999999998753
Q ss_pred --CCcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccc
Q psy7590 59 --KPTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 59 --~~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
++|++||+||..... ....++....+++|+.++.++++++ ++.+..++|++||...+..
T Consensus 113 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~----------- 181 (287)
T 3rku_A 113 FKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDA----------- 181 (287)
T ss_dssp GCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC-----------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCC-----------
Confidence 699999999975311 1133455778999999999999998 3455679999999865421
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+.+.++.+ .|+++.+++|+.|..+
T Consensus 182 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~ 224 (287)
T 3rku_A 182 -----YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE 224 (287)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence 122237999999999999998877 4899999999998765
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.7e-16 Score=140.61 Aligned_cols=156 Identities=14% Similarity=0.090 Sum_probs=118.6
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHcccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc----
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
.++||||||+ |.||.+++++|+++|++ .... ...+.++.+|++|++++.++++..
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF 99 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence 4689999999 89999999999999974 1111 123556789999999999888753
Q ss_pred -CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 -KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|++||+|+...... .+.++....+++|+.++.++++++ ++.+..++|++||...+...
T Consensus 100 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 167 (267)
T 3gdg_A 100 GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN------------ 167 (267)
T ss_dssp SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC------------
Confidence 6899999999754211 123445678999999999999988 44555699999998654221
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhhcC--ceEEEEecCcccCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQHG--VTYTSVIPCNVFGP 173 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g--~~~~ilRp~~v~G~ 173 (358)
.+ +....|+.+|...+.+.+.++.+.+ +.+..+.|+.+..+
T Consensus 168 -~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~ 210 (267)
T 3gdg_A 168 -FP-QEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTG 210 (267)
T ss_dssp -SS-SCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECS
T ss_pred -CC-CCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccc
Confidence 11 1223799999999999999888764 78999999988655
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.9e-15 Score=138.98 Aligned_cols=155 Identities=14% Similarity=0.123 Sum_probs=117.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC----C-------------C-------------CceeeecccccCCCHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD----D-------------E-------------TWIFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~----~-------------~-------------~~~~~~~~~~Dl~~~~~~~~ 53 (358)
.+++|||||+|.||+++++.|+++|++- . . ....+..+.+|++|++++.+
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 90 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK 90 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 4689999999999999999999999730 0 0 01124456899999999998
Q ss_pred HHhc-----cCCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----C-CCEEEEeeccceecCCCC
Q psy7590 54 LFSK-----YKPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G-VKKVVSCLSTCIFPDKTT 120 (358)
Q Consensus 54 ~~~~-----~~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~-v~r~V~~SS~~vy~~~~~ 120 (358)
+++. .++|++||+|+..... ..+.++....+++|+.++.++++++... + -.++|++||...+..
T Consensus 91 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~--- 167 (277)
T 3tsc_A 91 VVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM--- 167 (277)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC---
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC---
Confidence 8865 2699999999975431 1223455678999999999999886542 3 348999999876532
Q ss_pred CCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 121 ~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+.++.+. |+.+.+++|+.+..+.
T Consensus 168 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 211 (277)
T 3tsc_A 168 -------------QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM 211 (277)
T ss_dssp -------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred -------------CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence 1222379999999999998887764 8999999999997663
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-15 Score=139.93 Aligned_cols=154 Identities=16% Similarity=0.092 Sum_probs=115.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
|+||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|+|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 68999999999999999999999984 1000 023456689999999999998753 57999
Q ss_pred EEcccccCC--c--cccccchhhHHHHHHHHHHHHHHHHH----hcCCC-EEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 64 IHLAAMVGG--L--FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 64 ih~a~~~~~--~--~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
||+|+.... . ....++....+++|+.++.++.+++. +.+.. ++|++||...+.. .
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~----------------~ 165 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP----------------Y 165 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC----------------C
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC----------------C
Confidence 999997431 1 11234456789999999777766664 45566 9999999876531 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
|....|+.+|...+.+.+.++.+ .|+++++++|+.+..+.
T Consensus 166 ~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 166 PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 22237999999999999988765 48999999999987663
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-15 Score=141.06 Aligned_cols=156 Identities=15% Similarity=0.072 Sum_probs=119.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------------------CceeeecccccCCCHHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------------------TWIFVSSKEADLSNLESTQQL 54 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------------------~~~~~~~~~~Dl~~~~~~~~~ 54 (358)
.+++|||||+|.||.++++.|+++|++ ... ....+..+.+|++|++++.++
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 107 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA 107 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 468999999999999999999999974 100 011344568999999999888
Q ss_pred Hhcc-----CCcEEEEcccccCCcc----ccccchhhHHHHHHHHHHHHHHHHHhc-----CCCEEEEeeccceecCCCC
Q psy7590 55 FSKY-----KPTHVIHLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLDTSYKQ-----GVKKVVSCLSTCIFPDKTT 120 (358)
Q Consensus 55 ~~~~-----~~d~Vih~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~aa~~~-----~v~r~V~~SS~~vy~~~~~ 120 (358)
++.. ++|++||+|+...... .+.++....+++|+.++..+++++... +..++|++||...+...
T Consensus 108 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-- 185 (299)
T 3t7c_A 108 VDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA-- 185 (299)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC--
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC--
Confidence 8642 6999999999754211 123445779999999999999987543 24589999998665321
Q ss_pred CCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCC
Q psy7590 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 121 ~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 175 (358)
+....|+.+|...+.+.+.++.+. |+.+.++.|+.|..+..
T Consensus 186 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~ 229 (299)
T 3t7c_A 186 --------------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML 229 (299)
T ss_dssp --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTT
T ss_pred --------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccc
Confidence 222379999999999998887764 89999999999987753
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.8e-15 Score=139.68 Aligned_cols=154 Identities=16% Similarity=0.146 Sum_probs=114.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.++||||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 112 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARL 112 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999984 1100 001355689999999998888653 69
Q ss_pred cEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHHhc----C--CCEEEEeeccceecCCCCCCCccccccC
Q psy7590 61 THVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSYKQ----G--VKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 61 d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
|++||+||..... ....++....+++|+.++..+.+++... + ..++|++||...+..
T Consensus 113 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~------------- 179 (281)
T 4dry_A 113 DLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP------------- 179 (281)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-------------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-------------
Confidence 9999999974321 1223445678999999988887776543 2 358999999865421
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+....|+.+|...+.+.+.++.+ .|+.+.++.|+.|..+
T Consensus 180 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 222 (281)
T 4dry_A 180 ---RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATD 222 (281)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-
T ss_pred ---CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcCh
Confidence 122237999999999999888765 5899999999988654
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-15 Score=137.10 Aligned_cols=154 Identities=18% Similarity=0.134 Sum_probs=115.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.|+||||||+|.||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 86 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKID 86 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999973 100 0112445689999999988887643 699
Q ss_pred EEEEccccc-CC--c-cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMV-GG--L-FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~-~~--~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|||+|+.. .. . ....++....+++|+.++.++++++... +..++|++||...+...
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 151 (262)
T 1zem_A 87 FLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP--------------- 151 (262)
T ss_dssp EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC---------------
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---------------
Confidence 999999965 21 0 1122345678999999999999887653 55699999998665321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++.+ .|+++.+++|+.+..+
T Consensus 152 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 152 -PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 12237999999998888877654 4899999999987544
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.67 E-value=7.5e-16 Score=142.33 Aligned_cols=154 Identities=14% Similarity=0.071 Sum_probs=114.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
+.++||||||+|+||+++++.|+++|++ .... ...+.++.+|++|++++.++++.. +
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999974 1100 013556789999999998887642 6
Q ss_pred CcEEEEc-ccccCCcc--ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 60 PTHVIHL-AAMVGGLF--HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 60 ~d~Vih~-a~~~~~~~--~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
+|+|||+ |+...... .+.++....+++|+.++.++++++... +..++|++||...+...
T Consensus 107 iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--------------- 171 (286)
T 1xu9_A 107 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY--------------- 171 (286)
T ss_dssp CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC---------------
T ss_pred CCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC---------------
Confidence 9999999 56533111 122344678999999999999988643 23599999998764321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc-----CceEEEEecCcccC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH-----GVTYTSVIPCNVFG 172 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~-----g~~~~ilRp~~v~G 172 (358)
|....|+.+|...|.+.+.++.+. ++.+++++|+.+..
T Consensus 172 -~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t 214 (286)
T 1xu9_A 172 -PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDT 214 (286)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCC
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCC
Confidence 222379999999999988876654 89999999988753
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-15 Score=137.42 Aligned_cols=153 Identities=15% Similarity=0.115 Sum_probs=112.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--------------CceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------------TWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------------~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
.+++|||||+|.||+++++.|+++|++ ... ....+.++.+|++|++++.++++..
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYG 86 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999983 100 1123445689999999998888642
Q ss_pred CCcEEEEcccccCCc--cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 59 KPTHVIHLAAMVGGL--FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
++|++||+||..... ....++....+++|+.++..+++++. +.+..++|++||...+..
T Consensus 87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~--------------- 151 (250)
T 3nyw_A 87 AVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYG--------------- 151 (250)
T ss_dssp CEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred CCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCC---------------
Confidence 699999999975321 11223456789999999999999884 345569999999865421
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFG 172 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G 172 (358)
..+.. .|+.+|...+.+.+.++.+. |+++.+++|+.+..
T Consensus 152 ~~~~~-~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T 193 (250)
T 3nyw_A 152 FADGG-IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNT 193 (250)
T ss_dssp -CCTT-HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCS
T ss_pred CCCCc-chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccC
Confidence 11223 79999999999988887764 89999999998753
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.67 E-value=2.3e-15 Score=139.22 Aligned_cols=155 Identities=15% Similarity=0.093 Sum_probs=116.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-CC------------ceeeecccccCCC----HHHHHHHHhcc--
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-ET------------WIFVSSKEADLSN----LESTQQLFSKY-- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-~~------------~~~~~~~~~Dl~~----~~~~~~~~~~~-- 58 (358)
.|++|||||+|.||+++++.|+++|++ .. .. ...+.++.+|+++ ++++.++++..
T Consensus 23 ~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~ 102 (288)
T 2x9g_A 23 APAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFR 102 (288)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHH
Confidence 468999999999999999999999974 21 10 1124456899999 98888887642
Q ss_pred ---CCcEEEEcccccCCcc-------------ccccchhhHHHHHHHHHHHHHHHHHhcC----------CCEEEEeecc
Q psy7590 59 ---KPTHVIHLAAMVGGLF-------------HNMSHNLDFFRVNMKINDNVLDTSYKQG----------VKKVVSCLST 112 (358)
Q Consensus 59 ---~~d~Vih~a~~~~~~~-------------~~~~~~~~~~~~nv~~~~~ll~aa~~~~----------v~r~V~~SS~ 112 (358)
++|+|||+|+...... ...+.....+++|+.++..+++++...- ..++|++||.
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~ 182 (288)
T 2x9g_A 103 AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDA 182 (288)
T ss_dssp HHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCT
T ss_pred hcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecc
Confidence 6999999999754211 1122345688999999999999886542 3489999998
Q ss_pred ceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 113 CIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 113 ~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
..+.. .+....|+.+|...+.+.+.++.+. |+.+.+++|+.+.++.
T Consensus 183 ~~~~~----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 183 MVDQP----------------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp TTTSC----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred cccCC----------------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 76532 1222379999999998888877654 8999999999998875
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.8e-16 Score=144.58 Aligned_cols=154 Identities=15% Similarity=0.108 Sum_probs=117.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C--CC---------------------CceeeecccccCCCHHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D--DE---------------------TWIFVSSKEADLSNLESTQQL 54 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~--~~---------------------~~~~~~~~~~Dl~~~~~~~~~ 54 (358)
.|+||||||+|.||+++++.|+++|++ . .. ....+..+.+|++|++++.++
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 125 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV 125 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 468999999999999999999999973 1 00 011344568999999999988
Q ss_pred Hhcc-----CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCC
Q psy7590 55 FSKY-----KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTY 121 (358)
Q Consensus 55 ~~~~-----~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~ 121 (358)
++.. ++|++||+|+..... ....++....+++|+.++..+++++.. .+ -.++|++||...+...
T Consensus 126 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~--- 202 (317)
T 3oec_A 126 VDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA--- 202 (317)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC---
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC---
Confidence 8753 799999999975421 112344567899999999999998854 22 3479999998665321
Q ss_pred CCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 122 PIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 122 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++.+. |+.+.+++|+.|.++
T Consensus 203 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 244 (317)
T 3oec_A 203 -------------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTE 244 (317)
T ss_dssp -------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred -------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCc
Confidence 222379999999999999887764 899999999999876
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.2e-15 Score=144.06 Aligned_cols=156 Identities=15% Similarity=0.081 Sum_probs=117.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc----C-CCC--------------ceeeecccccCCCHH--------------
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR----D-DET--------------WIFVSSKEADLSNLE-------------- 49 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~----~-~~~--------------~~~~~~~~~Dl~~~~-------------- 49 (358)
+.++||||||+|.||+++++.|+++|++ . ... ...+.++.+|++|++
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 124 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 124 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence 3468999999999999999999999974 1 100 112455689999998
Q ss_pred ---HHHHHHhcc-----CCcEEEEcccccCCccc---c--------------ccchhhHHHHHHHHHHHHHHHHHh----
Q psy7590 50 ---STQQLFSKY-----KPTHVIHLAAMVGGLFH---N--------------MSHNLDFFRVNMKINDNVLDTSYK---- 100 (358)
Q Consensus 50 ---~~~~~~~~~-----~~d~Vih~a~~~~~~~~---~--------------~~~~~~~~~~nv~~~~~ll~aa~~---- 100 (358)
++.++++.. ++|+|||+|+....... . .+.....+++|+.++..+++++..
T Consensus 125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 204 (328)
T 2qhx_A 125 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG 204 (328)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888887643 69999999997532111 1 233456789999999999988863
Q ss_pred cC------CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCccc
Q psy7590 101 QG------VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVF 171 (358)
Q Consensus 101 ~~------v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~ 171 (358)
.+ ..++|++||...+.. .+....|+.+|...+.+.+.++.+. |+.+.+++|+.|.
T Consensus 205 ~~~~~~~~~g~IV~isS~~~~~~----------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~ 268 (328)
T 2qhx_A 205 TPAKHRGTNYSIINMVDAMTNQP----------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 268 (328)
T ss_dssp SCGGGSCSCEEEEEECCTTTTSC----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred cCCcCCCCCcEEEEECchhhccC----------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 34 569999999865431 1222379999999999998887764 8999999999998
Q ss_pred CCC
Q psy7590 172 GPH 174 (358)
Q Consensus 172 G~~ 174 (358)
.+.
T Consensus 269 T~~ 271 (328)
T 2qhx_A 269 LVD 271 (328)
T ss_dssp CCC
T ss_pred CCc
Confidence 775
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-15 Score=140.32 Aligned_cols=154 Identities=16% Similarity=0.075 Sum_probs=117.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~----~~d~ 62 (358)
.+++|||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++|+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~ 112 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDI 112 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCE
Confidence 468999999999999999999999984 1111 123455689999999888877642 6999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
+||+|+...... ...++....+++|+.++.++++++. +.+..++|++||...+.. . +
T Consensus 113 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~---------------~-~ 176 (275)
T 4imr_A 113 LVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP---------------K-S 176 (275)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---------------C-T
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC---------------C-C
Confidence 999999743211 1233456689999999999999984 345569999999876531 1 1
Q ss_pred CCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
....|+.||...+.+.+.++.+. |+.+.+++|+.+..+
T Consensus 177 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 177 VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence 12269999999999998887764 899999999988654
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.8e-14 Score=133.23 Aligned_cols=152 Identities=13% Similarity=0.080 Sum_probs=115.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------------ceeeecccccCCCHHHHHHHHhcc-
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------------WIFVSSKEADLSNLESTQQLFSKY- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------------~~~~~~~~~Dl~~~~~~~~~~~~~- 58 (358)
.+++|||||+|.||+++++.|+++|++ .... ...+.++.+|++|++++.++++..
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 88 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTV 88 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 468999999999999999999999984 2211 123556789999999998888753
Q ss_pred ----CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCcccc
Q psy7590 59 ----KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 59 ----~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
++|++||+|+...... ...++....+++|+.++..+.+++... +..++|++||...+...
T Consensus 89 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------- 159 (285)
T 3sc4_A 89 EQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK--------- 159 (285)
T ss_dssp HHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG---------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC---------
Confidence 7999999999754211 122344668889999999999998765 45699999998553211
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcc
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNV 170 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v 170 (358)
.+....|+.+|...+.+.+.++.+ .|+.+.++.|+.+
T Consensus 160 ------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~ 199 (285)
T 3sc4_A 160 ------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTT 199 (285)
T ss_dssp ------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSC
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCc
Confidence 011237999999999999888776 5899999999843
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=5.1e-15 Score=134.40 Aligned_cols=157 Identities=9% Similarity=-0.027 Sum_probs=107.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceee---ecccccCC--CHHHHHHHHhc-----cCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFV---SSKEADLS--NLESTQQLFSK-----YKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~---~~~~~Dl~--~~~~~~~~~~~-----~~~d~Vih~a 67 (358)
||+||||||+|.||+++++.|+++|++ ........ .....++. |++++.++++. .++|+|||+|
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nA 80 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND 80 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 468999999999999999999999974 11111000 00000100 34444444332 1699999999
Q ss_pred ccc-CCc---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 68 AMV-GGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 68 ~~~-~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
+.. ... ....++....+++|+.++.++++++. +.+..++|++||...+... +....
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~ 144 (254)
T 1zmt_A 81 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----------------KELST 144 (254)
T ss_dssp CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC----------------TTCHH
T ss_pred CcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC----------------CCchH
Confidence 975 211 11223456789999999999998885 3455699999998664321 12237
Q ss_pred hHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~ 176 (358)
|+.+|...+.+.+.++.+. |+.+++++|+.++|+...
T Consensus 145 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~ 184 (254)
T 1zmt_A 145 YTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSP 184 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccc
Confidence 9999999999998887664 899999999999988643
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=5.3e-15 Score=133.79 Aligned_cols=155 Identities=14% Similarity=0.076 Sum_probs=116.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+.|++|||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++.. ++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3468999999999999999999999974 1000 113455689999999998888642 69
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|++||+|+...... .+.++....+++|+.++.++++++.. .+ .++|++||...+..
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~---------------- 148 (247)
T 2jah_A 86 DILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVN---------------- 148 (247)
T ss_dssp SEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCC----------------
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCC----------------
Confidence 99999999753211 12234466899999999999998854 34 69999999865432
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+.++.+ .|+++++++|+.+..+.
T Consensus 149 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 192 (247)
T 2jah_A 149 VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192 (247)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence 122237999999999888877665 48999999999987663
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=3e-15 Score=134.97 Aligned_cols=153 Identities=14% Similarity=0.106 Sum_probs=112.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccC--CCHHHHHHHHhcc----
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADL--SNLESTQQLFSKY---- 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl--~~~~~~~~~~~~~---- 58 (358)
+.++||||||+|.||+++++.|+++|++ ... ....+.++.+|+ ++++++.++++..
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~ 92 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF 92 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence 3468999999999999999999999984 100 001222335555 8999888877643
Q ss_pred -CCcEEEEcccccCCc----cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 59 -KPTHVIHLAAMVGGL----FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++|++||+|+..... ....++....+++|+.++..+++++. +.+..++|++||...+..
T Consensus 93 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------ 160 (247)
T 3i1j_A 93 GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKG------------ 160 (247)
T ss_dssp SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSC------------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCC------------
Confidence 699999999975321 11234556789999999999999984 445569999999865421
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh----cCceEEEEecCccc
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVF 171 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~ 171 (358)
.+....|+.+|...+.+.+.++.+ .++.+..+.|+.+.
T Consensus 161 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~ 202 (247)
T 3i1j_A 161 ----RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATR 202 (247)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCS
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Confidence 122237999999999999888765 37899999998764
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.3e-15 Score=137.01 Aligned_cols=152 Identities=18% Similarity=0.188 Sum_probs=114.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH---cccc------CCCC-------------ceeeecccccCCCHHHHHHHHhcc---
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKE---EEKR------DDET-------------WIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~---~g~~------~~~~-------------~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
.+++|||||+|.||+++++.|++ +|++ .... ...+..+.+|++|++++.++++..
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVREL 85 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhc
Confidence 46899999999999999999999 7873 1000 123456689999999998887542
Q ss_pred ----CCc--EEEEcccccCC----cc--ccccchhhHHHHHHHHHHHHHHHHHhcC------CCEEEEeeccceecCCCC
Q psy7590 59 ----KPT--HVIHLAAMVGG----LF--HNMSHNLDFFRVNMKINDNVLDTSYKQG------VKKVVSCLSTCIFPDKTT 120 (358)
Q Consensus 59 ----~~d--~Vih~a~~~~~----~~--~~~~~~~~~~~~nv~~~~~ll~aa~~~~------v~r~V~~SS~~vy~~~~~ 120 (358)
++| ++||+|+.... .. ...++....+++|+.++.++++++...- ..++|++||...+..
T Consensus 86 ~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~--- 162 (259)
T 1oaa_A 86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP--- 162 (259)
T ss_dssp CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC---
T ss_pred cccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC---
Confidence 468 99999997532 11 1234566789999999999999997642 247999999976532
Q ss_pred CCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc-CceEEEEecCccc
Q psy7590 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH-GVTYTSVIPCNVF 171 (358)
Q Consensus 121 ~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~v~ 171 (358)
.|....|+.+|...+.+.+.++.+. ++.+..+.|+.+-
T Consensus 163 -------------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~ 201 (259)
T 1oaa_A 163 -------------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp -------------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred -------------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcC
Confidence 1222379999999999999988775 4888999998764
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=137.44 Aligned_cols=154 Identities=20% Similarity=0.210 Sum_probs=97.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC------CceeeecccccCCCHHHH---HHHHhcc-CCcEEEEc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------TWIFVSSKEADLSNLEST---QQLFSKY-KPTHVIHL 66 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------~~~~~~~~~~Dl~~~~~~---~~~~~~~-~~d~Vih~ 66 (358)
+.++||||||+|+||+++++.|.+ |++ ... ....+..+.+|+++.++. .+.++.. ++|+|||+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~ 82 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA 82 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence 356899999999999999999987 652 100 012344557888777542 2222222 69999999
Q ss_pred ccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 67 AAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 67 a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+...... ...+.....+++|+.++..+.+++. +.+ .++|++||...+... |....
T Consensus 83 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~----------------~~~~~ 145 (245)
T 3e9n_A 83 AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPH----------------PGNTI 145 (245)
T ss_dssp C----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC--------------------------CHH
T ss_pred CCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCC----------------CCchH
Confidence 99754211 1223456788999999888777764 334 589999999765421 22237
Q ss_pred hHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
|+.+|...+.+.+.++.+ .|+++.+++|+.+.++.
T Consensus 146 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 183 (245)
T 3e9n_A 146 YAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPM 183 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence 999999999999988775 48999999999887763
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=8.2e-15 Score=135.17 Aligned_cols=156 Identities=19% Similarity=0.115 Sum_probs=114.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
+.|++|||||+|.||+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 83 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL 83 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 3568999999999999999999999984 1000 112345689999999998887653 79999
Q ss_pred EEcccccCCcccc--------ccchhhHHHHHHHHHHHHHHHHHhcC---CCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 64 IHLAAMVGGLFHN--------MSHNLDFFRVNMKINDNVLDTSYKQG---VKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 64 ih~a~~~~~~~~~--------~~~~~~~~~~nv~~~~~ll~aa~~~~---v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
||+|+........ .+.....+++|+.++..+++++...- -.++|++||...+..
T Consensus 84 vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------------- 148 (281)
T 3zv4_A 84 IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYP--------------- 148 (281)
T ss_dssp ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSS---------------
T ss_pred EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccC---------------
Confidence 9999975321000 11245678899999999999986531 248999999865421
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhcC--ceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQHG--VTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~g--~~~~ilRp~~v~G~~ 174 (358)
.+....|+.||...+.+.+.++.+.+ +.+..+.|+.|..+-
T Consensus 149 -~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~ 191 (281)
T 3zv4_A 149 -NGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDL 191 (281)
T ss_dssp -SSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCc
Confidence 12223799999999999999887653 999999999887664
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.6e-14 Score=135.76 Aligned_cols=154 Identities=10% Similarity=0.036 Sum_probs=116.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------------ceeeecccccCCCHHHHHHHHhcc-
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------------WIFVSSKEADLSNLESTQQLFSKY- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------------~~~~~~~~~Dl~~~~~~~~~~~~~- 58 (358)
.++||||||+|.||.++++.|+++|++ .... ...+..+.+|++|++++.++++..
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~ 124 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI 124 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 358999999999999999999999984 2111 123456689999999999888753
Q ss_pred ----CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCcccc
Q psy7590 59 ----KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 59 ----~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
++|+|||+|+...... ...+.....+++|+.++.++++++.. .+..++|++||...+...
T Consensus 125 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~--------- 195 (346)
T 3kvo_A 125 KKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV--------- 195 (346)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG---------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC---------
Confidence 7999999999754211 12234467899999999999999853 455699999998654321
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCccc
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVF 171 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~ 171 (358)
. .+....|+.+|...+.+.+.++.+. |+.+..+.|+.+.
T Consensus 196 ----~-~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i 236 (346)
T 3kvo_A 196 ----W-FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAI 236 (346)
T ss_dssp ----G-TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCB
T ss_pred ----C-CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcc
Confidence 0 1122379999999999999887774 7999999998543
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.8e-14 Score=142.84 Aligned_cols=153 Identities=21% Similarity=0.181 Sum_probs=117.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CCC---C-----------ceeeecccccCCCHHHHHHHHhcc----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DDE---T-----------WIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~---~-----------~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
.++||||||+|+||.+++++|.++|++ ... . ...+.++.+|++|++++.++++..
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g 305 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 305 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 468999999999999999999999873 111 0 124566789999999999999863
Q ss_pred CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc-eecCCCCCCCccccccCCCCC
Q psy7590 59 KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++|+|||+|+..... ..+.+.....+++|+.++.+|.+++...+.++||++||.+ +++...
T Consensus 306 ~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g--------------- 370 (486)
T 2fr1_A 306 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG--------------- 370 (486)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT---------------
T ss_pred CCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC---------------
Confidence 469999999975421 1122344567889999999999999998889999999984 444221
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 174 (358)
.. .|+.+|...+.+..+... .|+++++++|+.+.+++
T Consensus 371 -~~-~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~g 407 (486)
T 2fr1_A 371 -LG-GYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSG 407 (486)
T ss_dssp -CT-TTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC---
T ss_pred -CH-HHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCc
Confidence 12 699999999988876644 59999999999887653
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.7e-14 Score=133.26 Aligned_cols=150 Identities=18% Similarity=0.171 Sum_probs=109.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCC------------Cce-------ee----ecccccCCCHHHHHHHHhc---
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDE------------TWI-------FV----SSKEADLSNLESTQQLFSK--- 57 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~------------~~~-------~~----~~~~~Dl~~~~~~~~~~~~--- 57 (358)
.|+||||||+|.||+++++.|+++|++-.. ... .+ ....+|+.+.+++.++++.
T Consensus 9 gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~~ 88 (319)
T 1gz6_A 9 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALD 88 (319)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHHH
Confidence 468999999999999999999999874100 000 00 0124799998877666543
Q ss_pred -c-CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeecc-ceecCCCCCCCcccc
Q psy7590 58 -Y-KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLST-CIFPDKTTYPIDETM 127 (358)
Q Consensus 58 -~-~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~-~vy~~~~~~~~~E~~ 127 (358)
. ++|+|||+|+..... ....+.....+++|+.++.++.+++ ++.+..++|++||. +.++..
T Consensus 89 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~--------- 159 (319)
T 1gz6_A 89 TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF--------- 159 (319)
T ss_dssp HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC---------
Confidence 2 699999999975421 1123445678999999998888887 34566799999997 444421
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcc
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNV 170 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v 170 (358)
....|+.+|...+.+.+.++.+ .|+.+.+++|+.+
T Consensus 160 --------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 160 --------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp --------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred --------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 1227999999999999888766 4899999999876
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.6e-14 Score=130.35 Aligned_cols=154 Identities=12% Similarity=0.058 Sum_probs=114.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------------ceeeecccccCCCHHHHHHHHhcc-
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------------WIFVSSKEADLSNLESTQQLFSKY- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------------~~~~~~~~~Dl~~~~~~~~~~~~~- 58 (358)
.|++|||||+|.||+++++.|.++|++ .... ...+..+.+|++|++++.++++..
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 85 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATV 85 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 468999999999999999999999984 2111 113456789999999998888643
Q ss_pred ----CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCcccc
Q psy7590 59 ----KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 59 ----~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
++|++||+|+...... ...++....+++|+.++..+.+++.. .+..++|++||...+...
T Consensus 86 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------- 156 (274)
T 3e03_A 86 DTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA--------- 156 (274)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH---------
T ss_pred HHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC---------
Confidence 6999999999753211 12234466889999999999999864 345699999998654210
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCccc
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVF 171 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~ 171 (358)
..+....|+.||...+.+.+.++.+. |+.+.++.|+.+.
T Consensus 157 -----~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v 198 (274)
T 3e03_A 157 -----WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVI 198 (274)
T ss_dssp -----HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCB
T ss_pred -----CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCccc
Confidence 01112279999999999998887663 8999999998543
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.59 E-value=1.7e-14 Score=135.96 Aligned_cols=155 Identities=14% Similarity=0.060 Sum_probs=117.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------------ceeeecccccCCCHHHHHHHHhcc--
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------------WIFVSSKEADLSNLESTQQLFSKY-- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------------~~~~~~~~~Dl~~~~~~~~~~~~~-- 58 (358)
.++||||||+|.||++++++|+++|++ .... ...+..+.+|++|++++.++++..
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 368999999999999999999999863 0000 023456689999999999998753
Q ss_pred -CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 -KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|+|||+|+..... ....++....+++|+.++.++++++ ++.+..++|++||...+...
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~------------ 149 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL------------ 149 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC------------
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC------------
Confidence 599999999964311 1123345678999999999999986 34566799999998664321
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
+....|+.||...+.+.+.++.+ .|+++++++|+.|..+.
T Consensus 150 ----~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 150 ----PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred ----CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 22237999999999999888774 58999999999987664
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.58 E-value=4.9e-14 Score=140.47 Aligned_cols=151 Identities=19% Similarity=0.201 Sum_probs=117.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CCC--------------CceeeecccccCCCHHHHHHHHhccCCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DDE--------------TWIFVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~--------------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
.++||||||+|+||.+++++|.++|++ ... ....+.++.+|++|++++.++++..++|+
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~ 338 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNA 338 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcE
Confidence 468999999999999999999999873 110 01235667899999999999998656999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeecc-ceecCCCCCCCccccccCCCCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLST-CIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~-~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|||+|+...... ...+.....+++|+.++.+|.+++... +.++||++||. ++++.. ..
T Consensus 339 VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~-----------------g~ 401 (511)
T 2z5l_A 339 VFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA-----------------GQ 401 (511)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT-----------------TB
T ss_pred EEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC-----------------CC
Confidence 999999754211 122344567899999999999999877 77899999998 444432 12
Q ss_pred cchHHHHHHHHHHHHHHHhhcCceEEEEecCcccC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFG 172 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G 172 (358)
..|+.+|...|.+.+.+. ..|+++++++|+.+.+
T Consensus 402 ~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~ 435 (511)
T 2z5l_A 402 GAYAAANAALDALAERRR-AAGLPATSVAWGLWGG 435 (511)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCS
T ss_pred HHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccC
Confidence 279999999999988764 4599999999987743
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-14 Score=133.23 Aligned_cols=154 Identities=16% Similarity=0.088 Sum_probs=115.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----C-CCC--------------ceeeecccccCCCHH---------------
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----D-DET--------------WIFVSSKEADLSNLE--------------- 49 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----~-~~~--------------~~~~~~~~~Dl~~~~--------------- 49 (358)
.|++|||||+|.||+++++.|+++|++ . ... ...+..+.+|+++++
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 88 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccch
Confidence 368999999999999999999999974 1 110 112455689999998
Q ss_pred --HHHHHHhcc-----CCcEEEEcccccCCcc---cc--------------ccchhhHHHHHHHHHHHHHHHHHh----c
Q psy7590 50 --STQQLFSKY-----KPTHVIHLAAMVGGLF---HN--------------MSHNLDFFRVNMKINDNVLDTSYK----Q 101 (358)
Q Consensus 50 --~~~~~~~~~-----~~d~Vih~a~~~~~~~---~~--------------~~~~~~~~~~nv~~~~~ll~aa~~----~ 101 (358)
++.++++.. ++|++||+|+...... .. .+.....+++|+.++..+++++.. .
T Consensus 89 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 168 (291)
T 1e7w_A 89 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 168 (291)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 888887643 6999999999753211 11 233456889999999999998863 3
Q ss_pred C------CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 102 G------VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 102 ~------v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
+ ..++|++||...+.. .|....|+.+|...+.+.+.++.+ .|+.+..++|+.+..
T Consensus 169 ~~~~~~~~g~Iv~isS~~~~~~----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T 232 (291)
T 1e7w_A 169 PAKHRGTNYSIINMVDAMTNQP----------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 232 (291)
T ss_dssp CGGGSCSCEEEEEECCTTTTSC----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCC
T ss_pred CCCCCCCCcEEEEEechhhcCC----------------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccC
Confidence 4 468999999865432 122237999999999998888765 489999999998855
Q ss_pred C
Q psy7590 173 P 173 (358)
Q Consensus 173 ~ 173 (358)
+
T Consensus 233 ~ 233 (291)
T 1e7w_A 233 V 233 (291)
T ss_dssp G
T ss_pred C
Confidence 4
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=134.51 Aligned_cols=171 Identities=15% Similarity=0.131 Sum_probs=116.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------C------------CCCceeeecccccCCCH-HHHHHHHhcc-----
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------D------------DETWIFVSSKEADLSNL-ESTQQLFSKY----- 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~------------~~~~~~~~~~~~Dl~~~-~~~~~~~~~~----- 58 (358)
+.++||||||+|.||.++++.|+++|++ . ......+.++.+|++++ +++.++++..
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 3468999999999999999999999983 1 00112355668999998 8777766532
Q ss_pred CCcEEEEcccccCCc---------------------------------cccccchhhHHHHHHHHHHHHHHHHHh----c
Q psy7590 59 KPTHVIHLAAMVGGL---------------------------------FHNMSHNLDFFRVNMKINDNVLDTSYK----Q 101 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~---------------------------------~~~~~~~~~~~~~nv~~~~~ll~aa~~----~ 101 (358)
++|+|||+||..... ....+.....+++|+.++..+++++.. .
T Consensus 91 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~ 170 (311)
T 3o26_A 91 KLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLS 170 (311)
T ss_dssp SCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccC
Confidence 699999999976310 012233456799999998888888753 4
Q ss_pred CCCEEEEeeccceecCCCCC-----------CCc----------------cccccCCCCCCCCcchHHHHHHHHHHHHHH
Q psy7590 102 GVKKVVSCLSTCIFPDKTTY-----------PID----------------ETMVHNGPPHPSNFGYSHAKRMLDVLNKAY 154 (358)
Q Consensus 102 ~v~r~V~~SS~~vy~~~~~~-----------~~~----------------E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~ 154 (358)
+..++|++||...+...... ..+ +.........+....|+.||...+.+.+.+
T Consensus 171 ~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l 250 (311)
T 3o26_A 171 DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVL 250 (311)
T ss_dssp SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHH
Confidence 45699999998654221000 000 000000011122237999999999999999
Q ss_pred Hhhc-CceEEEEecCcccCC
Q psy7590 155 YQQH-GVTYTSVIPCNVFGP 173 (358)
Q Consensus 155 ~~~~-g~~~~ilRp~~v~G~ 173 (358)
+.+. ++.+.++.||.|..+
T Consensus 251 a~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 251 ANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp HHHCTTSEEEEECCCSBCSG
T ss_pred HhhcCCceEEEecCCceecC
Confidence 8886 699999999988654
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.56 E-value=7.9e-15 Score=132.36 Aligned_cols=154 Identities=13% Similarity=0.028 Sum_probs=105.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc---C-C--CCceeee-----cccccCCCHHHHHHHHh----cc-CCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR---D-D--ETWIFVS-----SKEADLSNLESTQQLFS----KY-KPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~---~-~--~~~~~~~-----~~~~Dl~~~~~~~~~~~----~~-~~d~Vih~a 67 (358)
+|+||||||+|.||+++++.|+++|++ . . ......+ ...+|+.|++++.++++ .. ++|+|||+|
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~A 80 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTIVSND 80 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGSSCEEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 368999999999999999999999874 1 1 1110000 00123334443333332 22 689999999
Q ss_pred cccCC---c---cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 68 AMVGG---L---FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 68 ~~~~~---~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
+.... . ....++....+++|+.++..+++++. +.+..++|++||...+... |..
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----------------~~~ 144 (244)
T 1zmo_A 81 YIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL----------------AYN 144 (244)
T ss_dssp CCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC----------------TTC
T ss_pred CcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC----------------CCc
Confidence 97532 1 11223456789999999999998885 4556799999998765321 112
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...+.+.+.++.+ .|+.+.+++|+.+..+
T Consensus 145 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 183 (244)
T 1zmo_A 145 PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNP 183 (244)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBT
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCC
Confidence 27999999999998888665 4899999999988655
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=6.2e-14 Score=127.57 Aligned_cols=155 Identities=17% Similarity=0.084 Sum_probs=113.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----------ceeeecccccCCCHHHHHHHHhc------cC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----------WIFVSSKEADLSNLESTQQLFSK------YK 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~------~~ 59 (358)
+.+++|||||+|.||+++++.|+++|++ .... ...+..+.+|++|++++.++++. .+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999999999999974 1100 11345668999999998887754 25
Q ss_pred CcEEEEccc--cc-------CCc-cccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCcc
Q psy7590 60 PTHVIHLAA--MV-------GGL-FHNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDE 125 (358)
Q Consensus 60 ~d~Vih~a~--~~-------~~~-~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E 125 (358)
+|++||+|+ .. .+. ....+.....+++|+.++..+.+++. +.+..++|++||...+..
T Consensus 84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------- 155 (260)
T 2qq5_A 84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY-------- 155 (260)
T ss_dssp CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC--------
T ss_pred ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC--------
Confidence 899999994 32 110 11223345677888888877766664 455679999999876531
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 126 TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 126 ~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
. +. ..|+.+|...+.+.+.++.+ .|+++++++|+.+..+.
T Consensus 156 ------~--~~-~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 ------M--FN-VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp ------C--SS-HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred ------C--CC-CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 1 12 27999999999999888754 48999999999987663
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.54 E-value=4e-14 Score=129.56 Aligned_cols=153 Identities=16% Similarity=0.054 Sum_probs=114.5
Q ss_pred CCEEEEEcC--CChhHHHHHHHHHHcccc------CCCC---------ceeeecccccCCCHHHHHHHHhcc--------
Q psy7590 4 EKIILVTGG--TGLVGKAIEKIVKEEEKR------DDET---------WIFVSSKEADLSNLESTQQLFSKY-------- 58 (358)
Q Consensus 4 ~~~VlItGa--tG~lG~~l~~~L~~~g~~------~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~~-------- 58 (358)
.|+|||||| +|.||+++++.|+++|++ .... ...+.++.+|++|++++.++++..
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~ 86 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGN 86 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTC
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 358999999 999999999999999974 1111 012445689999999998888743
Q ss_pred CCcEEEEcccccCC------c--cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccc
Q psy7590 59 KPTHVIHLAAMVGG------L--FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 59 ~~d~Vih~a~~~~~------~--~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
++|++||+|+.... . ....++....+++|+.++..+++++...- -.++|++||...++.
T Consensus 87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~----------- 155 (269)
T 2h7i_A 87 KLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM----------- 155 (269)
T ss_dssp CEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC-----------
T ss_pred CceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc-----------
Confidence 69999999997531 0 11223456688999999999999997642 148999998754321
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.+.++.+. |+.+.+++|+.+..+
T Consensus 156 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 156 ------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp ------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred ------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence 112279999999999998887664 899999999877543
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-13 Score=126.76 Aligned_cols=157 Identities=12% Similarity=-0.029 Sum_probs=106.9
Q ss_pred CCEEEEEcCC--ChhHHHHHHHHHHccccC-----------------CCCce------------eeecccc--------c
Q psy7590 4 EKIILVTGGT--GLVGKAIEKIVKEEEKRD-----------------DETWI------------FVSSKEA--------D 44 (358)
Q Consensus 4 ~~~VlItGat--G~lG~~l~~~L~~~g~~~-----------------~~~~~------------~~~~~~~--------D 44 (358)
.|++|||||+ |.||+++++.|+++|++- ..... ....+.+ |
T Consensus 8 ~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 87 (297)
T 1d7o_A 8 GKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPED 87 (297)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchhh
Confidence 4689999999 999999999999998730 00000 0011111 2
Q ss_pred CC----C--------HHHHHHHHhc----c-CCcEEEEcccccC----C-ccccccchhhHHHHHHHHHHHHHHHHHhcC
Q psy7590 45 LS----N--------LESTQQLFSK----Y-KPTHVIHLAAMVG----G-LFHNMSHNLDFFRVNMKINDNVLDTSYKQG 102 (358)
Q Consensus 45 l~----~--------~~~~~~~~~~----~-~~d~Vih~a~~~~----~-~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~ 102 (358)
+. | ++++.++++. + ++|++||+|+... + .....++....+++|+.++..+++++...-
T Consensus 88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 167 (297)
T 1d7o_A 88 VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM 167 (297)
T ss_dssp SCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 22 2 4445554432 1 6999999998532 1 112234456789999999999999997651
Q ss_pred --CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh----cCceEEEEecCcccCCCC
Q psy7590 103 --VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 103 --v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~~~ 175 (358)
-.++|++||...+... + .....|+.+|...+.+.+.++.+ .|+.+.+++|+.+..+..
T Consensus 168 ~~~g~iv~isS~~~~~~~-------------~--~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~ 231 (297)
T 1d7o_A 168 NPGGASISLTYIASERII-------------P--GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA 231 (297)
T ss_dssp EEEEEEEEEECGGGTSCC-------------T--TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred ccCceEEEEeccccccCC-------------C--CcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchh
Confidence 1489999998654211 1 11026999999999998887654 589999999999988753
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.51 E-value=6.2e-14 Score=137.88 Aligned_cols=155 Identities=14% Similarity=0.146 Sum_probs=115.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--------CceeeecccccCCCHHHHHHHHhcc------CCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------TWIFVSSKEADLSNLESTQQLFSKY------KPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~------~~d~V 63 (358)
.+++|||||+|.||.++++.|.++|.+ ... ....+.++.+|++|++++.++++.. ++|+|
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~l 292 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDIL 292 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEE
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceEE
Confidence 468999999999999999999999874 000 0012345689999999998887642 49999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+|+...... .+.+.....+++|+.++.++.+++... +..+||++||...+... +.
T Consensus 293 V~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~----------------~g 356 (454)
T 3u0b_A 293 VNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN----------------RG 356 (454)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC----------------TT
T ss_pred EECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC----------------CC
Confidence 99999754211 123345678999999999999999876 45699999998554221 11
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
...|+.+|...+.+.+.++.+ .|+++.++.|+.+..+.
T Consensus 357 ~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 397 (454)
T 3u0b_A 357 QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM 397 (454)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChh
Confidence 227999999888777776654 48999999999887653
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.8e-12 Score=116.60 Aligned_cols=154 Identities=16% Similarity=0.172 Sum_probs=116.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-----CCceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----ETWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~~ 71 (358)
.|++|||||++-||+++++.|.++|.+ .. .....+..+.+|++|+++++++++.+ ++|++||+||...
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~~ 90 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGISR 90 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 578999999999999999999999984 11 11223445689999999999999875 5999999999754
Q ss_pred Ccc-ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHH
Q psy7590 72 GLF-HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRML 147 (358)
Q Consensus 72 ~~~-~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~ 147 (358)
+.. .+.++.+..+++|+.++..+.+++... +-.++|.+||...... .|....|+.||...
T Consensus 91 ~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~----------------~~~~~~Y~asKaav 154 (242)
T 4b79_A 91 DREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFG----------------SADRPAYSASKGAI 154 (242)
T ss_dssp GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSC----------------CSSCHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCC----------------CCCCHHHHHHHHHH
Confidence 321 223455678999999998888877542 1248999999854321 12223799999999
Q ss_pred HHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 148 DVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 148 E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..+.+..+.+ +|+++..|-|+.|--|
T Consensus 155 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~ 183 (242)
T 4b79_A 155 VQLTRSLACEYAAERIRVNAIAPGWIDTP 183 (242)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCC
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCCCCCh
Confidence 9888877665 4899999999988655
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.48 E-value=6.5e-12 Score=113.90 Aligned_cols=155 Identities=19% Similarity=0.148 Sum_probs=115.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+.|.+|||||++-||+++++.|.++|.+ .. .....+..+.+|++|++++.++++.. ++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999999999973 00 00112344589999999998887642 79
Q ss_pred cEEEEcccccCC---c-cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGG---L-FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~---~-~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|++||+||.... . ..+.++.+..+++|+.++..+.+++.. ++-.++|++||...+.
T Consensus 86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~---------------- 149 (254)
T 4fn4_A 86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIR---------------- 149 (254)
T ss_dssp CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTC----------------
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcC----------------
Confidence 999999996432 1 123345677999999999888877754 3445899999986432
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
..|....|+.+|.....+.+..+.+. |+++..|-|+.|--+
T Consensus 150 ~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 193 (254)
T 4fn4_A 150 GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTN 193 (254)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCc
Confidence 11222379999999888887776653 899999999988655
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=5.7e-12 Score=113.82 Aligned_cols=153 Identities=16% Similarity=0.105 Sum_probs=113.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C-------CCCceeeecccccCCCHHHHHHHHhc-----cCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D-------DETWIFVSSKEADLSNLESTQQLFSK-----YKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~-------~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vih~ 66 (358)
|+||||||++-||+++++.|.++|.+ . ......+..+.+|++|++++.++++. .++|++||+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN 82 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN 82 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 58999999999999999999999984 0 01112234458999999999887754 279999999
Q ss_pred ccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 67 AAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 67 a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
|+..... ..+.++....+++|+.++..+.+++... +-.++|++||...+. ..|....|
T Consensus 83 AG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~----------------~~~~~~~Y 146 (247)
T 3ged_A 83 ACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ----------------SEPDSEAY 146 (247)
T ss_dssp CCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS----------------CCTTCHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc----------------CCCCCHHH
Confidence 9864321 1223456778999999998888777542 124899999986542 12223379
Q ss_pred HHHHHHHHHHHHHHHhhc--CceEEEEecCcccCC
Q psy7590 141 SHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~ 173 (358)
+.||.....+.+..+.+. ++.+..|-|+.+--+
T Consensus 147 ~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~ 181 (247)
T 3ged_A 147 ASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVT 181 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCC
Confidence 999999998888777654 799999999987543
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=4.3e-12 Score=115.72 Aligned_cols=152 Identities=21% Similarity=0.124 Sum_probs=110.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C-CCCceeeecccccCCCHHHHHHHHhc-----cCCcEEEEcccccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D-DETWIFVSSKEADLSNLESTQQLFSK-----YKPTHVIHLAAMVGG 72 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~-~~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vih~a~~~~~ 72 (358)
|++|||||++-||+++++.|.++|.+ . .......-.+.+|+++++++.++++. .++|++||+|+....
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~ 91 (261)
T 4h15_A 12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSA 91 (261)
T ss_dssp CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCC
T ss_pred CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCcc
Confidence 58999999999999999999999984 1 11122222458999999998887764 269999999986431
Q ss_pred c-----cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 73 L-----FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 73 ~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
. ..+.++....+++|+.++..+.+++.. ++-.++|++||...+-.. + +....|+.|
T Consensus 92 ~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~--------------~-~~~~~Y~as 156 (261)
T 4h15_A 92 AGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL--------------P-ESTTAYAAA 156 (261)
T ss_dssp CSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------------T-TTCHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC--------------C-CccHHHHHH
Confidence 1 112334567899999999888777653 455589999998543111 1 112269999
Q ss_pred HHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 144 KRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 144 K~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
|...+.+.+..+.+ +|+++..|-|+.|-
T Consensus 157 Kaal~~lt~~lA~Ela~~gIrVN~V~PG~i~ 187 (261)
T 4h15_A 157 KAALSTYSKAMSKEVSPKGVRVVRVSPGWIE 187 (261)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEeCCCcC
Confidence 99999888877665 48999999998774
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.43 E-value=2e-12 Score=117.29 Aligned_cols=154 Identities=16% Similarity=0.105 Sum_probs=114.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.|.+|||||++-||+++++.|.++|.+ .. .....+..+.+|++|+++++++++.. ++|
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 88 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVD 88 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCc
Confidence 368999999999999999999999984 00 01123445689999999998887652 699
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh-----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK-----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~-----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+||..... ..+.++....+++|+.++..+.+++.. .+-.++|.+||...+..
T Consensus 89 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~---------------- 152 (255)
T 4g81_D 89 ILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA---------------- 152 (255)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB----------------
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC----------------
Confidence 999999974421 123345677899999999888887643 23458999999865421
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|.....+.+..+.+ +|+++..|-|+.|.-+
T Consensus 153 ~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 195 (255)
T 4g81_D 153 RPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTD 195 (255)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 222337999999998888877665 4899999999988644
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-12 Score=128.41 Aligned_cols=153 Identities=20% Similarity=0.204 Sum_probs=119.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------C---CCC-----------ceeeecccccCCCHHHHHHHHhcc----C
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------D---DET-----------WIFVSSKEADLSNLESTQQLFSKY----K 59 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------~---~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~----~ 59 (358)
+++|||||+|.||.++++.|.++|.+ . ... ...+.++.+|++|++++.++++.. +
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ 319 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP 319 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999973 1 010 124567789999999999999753 5
Q ss_pred CcEEEEccccc-CCc---cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc-eecCCCCCCCccccccCCCCC
Q psy7590 60 PTHVIHLAAMV-GGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC-IFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 60 ~d~Vih~a~~~-~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~-vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|+|||+|+.. ... ..+.+.....+++|+.++.++.+++...+..+||++||.. +++..
T Consensus 320 ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~---------------- 383 (496)
T 3mje_A 320 LTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG---------------- 383 (496)
T ss_dssp EEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT----------------
T ss_pred CeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC----------------
Confidence 89999999975 211 1122345678999999999999999998888999999984 43321
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
....|+.+|...+.+.++.. ..|+++++|.|+.+.+...
T Consensus 384 -g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm 422 (496)
T 3mje_A 384 -GQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGM 422 (496)
T ss_dssp -TCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC
T ss_pred -CcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCcc
Confidence 12279999999999888764 4599999999998876654
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.41 E-value=1.8e-11 Score=111.25 Aligned_cols=157 Identities=11% Similarity=-0.052 Sum_probs=111.6
Q ss_pred CCC--CCEEEEEcCCC--hhHHHHHHHHHHcccc------CC------------CCceeeecccccCCCHHHHHHHHhc-
Q psy7590 1 MAE--EKIILVTGGTG--LVGKAIEKIVKEEEKR------DD------------ETWIFVSSKEADLSNLESTQQLFSK- 57 (358)
Q Consensus 1 m~~--~~~VlItGatG--~lG~~l~~~L~~~g~~------~~------------~~~~~~~~~~~Dl~~~~~~~~~~~~- 57 (358)
||+ .|++|||||+| =||.++++.|.++|.+ .. .....+..+.+|+++++++.++++.
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI 80 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence 676 46899999987 6999999999999983 10 0111234458999999999887754
Q ss_pred ----cCCcEEEEcccccCCcc-------ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCc
Q psy7590 58 ----YKPTHVIHLAAMVGGLF-------HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPID 124 (358)
Q Consensus 58 ----~~~d~Vih~a~~~~~~~-------~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~ 124 (358)
.++|++||+|+...... ...++....+++|+.++..+..++...- -.++|++||.....
T Consensus 81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~-------- 152 (256)
T 4fs3_A 81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF-------- 152 (256)
T ss_dssp HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS--------
T ss_pred HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc--------
Confidence 26999999999643210 1111223456788888888888776543 23899999985431
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 125 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|....|+.+|...+.+.+.++.+ +|+++..|-|+.+--+
T Consensus 153 --------~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 196 (256)
T 4fs3_A 153 --------AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTL 196 (256)
T ss_dssp --------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred --------CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCCh
Confidence 1222337999999999888877665 4899999999877544
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.6e-11 Score=111.76 Aligned_cols=155 Identities=18% Similarity=0.216 Sum_probs=114.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhc-----cCCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSK-----YKPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~ 62 (358)
.|.+|||||++-||+++++.|.++|.+ .... ...+..+.+|++|++++.++++. .++|+
T Consensus 7 gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDi 86 (258)
T 4gkb_A 7 DKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDG 86 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 368999999999999999999999973 1111 01233458999999998887754 27999
Q ss_pred EEEcccccCCcc--ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 63 VIHLAAMVGGLF--HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 63 Vih~a~~~~~~~--~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
+||+||...... ...++....+++|+.++..+.+++... +-.++|.+||...+.. .|..
T Consensus 87 LVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~----------------~~~~ 150 (258)
T 4gkb_A 87 LVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTG----------------QGNT 150 (258)
T ss_dssp EEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHC----------------CSSC
T ss_pred EEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccC----------------CCCc
Confidence 999999754221 223445678899999998888877532 1248999999865421 1222
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
..|+.+|...+.+.+..+.+ +|+++..|-|+.|--+.
T Consensus 151 ~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 190 (258)
T 4gkb_A 151 SGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPL 190 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChh
Confidence 37999999999888877765 48999999999886553
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.6e-12 Score=118.70 Aligned_cols=157 Identities=13% Similarity=-0.011 Sum_probs=94.6
Q ss_pred CCCC----CEEEEEcC--CChhHHHHHHHHHHcccc----C-------------CCCcee--------------------
Q psy7590 1 MAEE----KIILVTGG--TGLVGKAIEKIVKEEEKR----D-------------DETWIF-------------------- 37 (358)
Q Consensus 1 m~~~----~~VlItGa--tG~lG~~l~~~L~~~g~~----~-------------~~~~~~-------------------- 37 (358)
||.| +++||||| +|.||+++++.|+++|++ . ......
T Consensus 2 m~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (319)
T 2ptg_A 2 PLPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP 81 (319)
T ss_dssp CCCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-----------------------------
T ss_pred CcccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc
Confidence 5654 57999999 899999999999999873 1 000000
Q ss_pred -----eecccc------------cCCC--------HHHHHHHHhc----c-CCcEEEEcccccC----C-ccccccchhh
Q psy7590 38 -----VSSKEA------------DLSN--------LESTQQLFSK----Y-KPTHVIHLAAMVG----G-LFHNMSHNLD 82 (358)
Q Consensus 38 -----~~~~~~------------Dl~~--------~~~~~~~~~~----~-~~d~Vih~a~~~~----~-~~~~~~~~~~ 82 (358)
...+.+ |+++ ++++.++++. + ++|++||+|+... + .....+....
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~ 161 (319)
T 2ptg_A 82 VDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLA 161 (319)
T ss_dssp ---CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHH
T ss_pred ccccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHH
Confidence 111222 2222 2345554442 1 6999999998542 1 1122334567
Q ss_pred HHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCC-cchHHHHHHHHHHHHHHHhh--
Q psy7590 83 FFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN-FGYSHAKRMLDVLNKAYYQQ-- 157 (358)
Q Consensus 83 ~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~-~~Y~~sK~~~E~~~~~~~~~-- 157 (358)
.+++|+.++..+++++...- -.++|++||...+... |.. ..|+.+|...+.+.+.++.+
T Consensus 162 ~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------------~~~~~~Y~asKaal~~l~~~la~el~ 225 (319)
T 2ptg_A 162 AVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI----------------PGYGGGMSSAKAALESDCRTLAFEAG 225 (319)
T ss_dssp HHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------THHHHHHHHHHHH
T ss_pred HHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc----------------CccchhhHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999997651 1489999998654211 111 26999999999888877654
Q ss_pred --cCceEEEEecCcccCC
Q psy7590 158 --HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 158 --~g~~~~ilRp~~v~G~ 173 (358)
.|+.+.+|+|+.|..+
T Consensus 226 ~~~gIrvn~v~PG~v~T~ 243 (319)
T 2ptg_A 226 RARAVRVNCISAGPLKSR 243 (319)
T ss_dssp HHHCCEEEEEEECCCC--
T ss_pred cccCeeEEEEeeCCccCh
Confidence 5899999999988654
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.5e-11 Score=111.12 Aligned_cols=154 Identities=21% Similarity=0.115 Sum_probs=114.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|.+|||||++-||+++++.|.++|.+ .... ...+..+.+|++|++++.++++.. ++|++|
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV 108 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLF 108 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 367999999999999999999999984 1000 011233489999999998887652 699999
Q ss_pred EcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 65 HLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 65 h~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+||..... ..+.++....+++|+.++..+.+++...= -.++|.+||...+- ..|....
T Consensus 109 NNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~----------------~~~~~~~ 172 (273)
T 4fgs_A 109 VNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST----------------GTPAFSV 172 (273)
T ss_dssp ECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS----------------CCTTCHH
T ss_pred ECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc----------------CCCCchH
Confidence 999974321 12334567799999999999999987642 23799999985532 1222337
Q ss_pred hHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|+.+|.....+.+.++.++ |+++..|-|+.+--+
T Consensus 173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 209 (273)
T 4fgs_A 173 YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETT 209 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence 9999999999888887764 799999999988654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.35 E-value=6.6e-12 Score=125.55 Aligned_cols=150 Identities=15% Similarity=0.098 Sum_probs=115.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------------------------ceeeecccccCCCHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------------------------WIFVSSKEADLSNLEST 51 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------------------------~~~~~~~~~Dl~~~~~~ 51 (358)
.+++|||||+|.||.++++.|.++|.+ .... ...+.++.+|++|++++
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v 330 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAA 330 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHH
Confidence 468999999999999999999999874 1110 01356678999999999
Q ss_pred HHHHhcc----CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcC-----CCEEEEeeccceecCCC
Q psy7590 52 QQLFSKY----KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQG-----VKKVVSCLSTCIFPDKT 119 (358)
Q Consensus 52 ~~~~~~~----~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~-----v~r~V~~SS~~vy~~~~ 119 (358)
.++++.. ++|+|||+|+...... .+.+.....+++|+.++.+|.+++.... ..+||++||.+.+-..
T Consensus 331 ~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~- 409 (525)
T 3qp9_A 331 ARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG- 409 (525)
T ss_dssp HHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC-
T ss_pred HHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC-
Confidence 9999853 5899999999754211 1223456789999999999999998876 6799999998543211
Q ss_pred CCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcc
Q psy7590 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNV 170 (358)
Q Consensus 120 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v 170 (358)
+....|+.+|...+.+..++. ..|+++++|.|+.+
T Consensus 410 ---------------~g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 410 ---------------AGQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPW 444 (525)
T ss_dssp ---------------TTCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCB
T ss_pred ---------------CCCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcc
Confidence 122379999999998876553 34999999999988
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.3e-11 Score=111.10 Aligned_cols=154 Identities=18% Similarity=0.115 Sum_probs=115.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC---------CceeeecccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE---------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~---------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
.|.+|||||++-||.++++.|.++|.+ ... ....+..+.+|++|++++.++++..++|++||+||
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAG 88 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAG 88 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCC
Confidence 478999999999999999999999974 110 01123445899999999998888778999999999
Q ss_pred ccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 69 MVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 69 ~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
..... ..+.++.+..+++|+.++..+.+++.. .+ -.++|.+||...+.. .|....|
T Consensus 89 i~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g----------------~~~~~~Y 152 (247)
T 4hp8_A 89 IIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQG----------------GIRVPSY 152 (247)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC----------------CSSCHHH
T ss_pred CCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCC----------------CCCChHH
Confidence 74421 123345677999999999988887643 33 348999999865321 1222379
Q ss_pred HHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 141 SHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
+.||.....+.+..+.+ +|+++..|-|+.|--+
T Consensus 153 ~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~ 188 (247)
T 4hp8_A 153 TAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETN 188 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred HHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCc
Confidence 99999998888877665 3899999999887543
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=1.7e-11 Score=114.64 Aligned_cols=154 Identities=15% Similarity=-0.012 Sum_probs=103.6
Q ss_pred CEEEEEcC--CChhHHHHHHHHHHcccc----CC-------------CCce---e---------eecc------------
Q psy7590 5 KIILVTGG--TGLVGKAIEKIVKEEEKR----DD-------------ETWI---F---------VSSK------------ 41 (358)
Q Consensus 5 ~~VlItGa--tG~lG~~l~~~L~~~g~~----~~-------------~~~~---~---------~~~~------------ 41 (358)
+++||||| +|.||+++++.|+++|++ .. .... . +..+
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDV 89 (315)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchh
Confidence 58999999 899999999999999874 10 0000 0 1111
Q ss_pred cccCCC--------HHHHHHHHhc----c-CCcEEEEcccccC----C-ccccccchhhHHHHHHHHHHHHHHHHHhcC-
Q psy7590 42 EADLSN--------LESTQQLFSK----Y-KPTHVIHLAAMVG----G-LFHNMSHNLDFFRVNMKINDNVLDTSYKQG- 102 (358)
Q Consensus 42 ~~Dl~~--------~~~~~~~~~~----~-~~d~Vih~a~~~~----~-~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~- 102 (358)
.+|++| ++++.++++. + ++|++||+||... + .....++....+++|+.++..+.+++...-
T Consensus 90 ~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 169 (315)
T 2o2s_A 90 PQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMN 169 (315)
T ss_dssp CHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEE
T ss_pred hhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh
Confidence 223332 3455555442 1 6999999998642 1 112233456789999999999999997641
Q ss_pred -CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh----cCceEEEEecCcccCC
Q psy7590 103 -VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 103 -v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~ 173 (358)
-.++|++||...+... +. ... .|+.+|...+.+.+.++.+ .|+.+.++.|+.|..+
T Consensus 170 ~~g~Iv~isS~~~~~~~-------------~~-~~~-~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~ 230 (315)
T 2o2s_A 170 EGGSAVTLSYLAAERVV-------------PG-YGG-GMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSR 230 (315)
T ss_dssp EEEEEEEEEEGGGTSCC-------------TT-CCT-THHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCH
T ss_pred cCCEEEEEecccccccC-------------CC-ccH-HHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccch
Confidence 1489999998654211 11 112 6999999999888877654 5899999999987543
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-11 Score=125.98 Aligned_cols=151 Identities=13% Similarity=0.096 Sum_probs=106.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc---C-C-----------CCcee--------eecccccCCCHHHHHHHHhcc--
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR---D-D-----------ETWIF--------VSSKEADLSNLESTQQLFSKY-- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~---~-~-----------~~~~~--------~~~~~~Dl~~~~~~~~~~~~~-- 58 (358)
.+++|||||+|.||+++++.|.++|.+ . . ..... .....+|+.+.+++.++++..
T Consensus 19 gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~~ 98 (613)
T 3oml_A 19 GRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAIK 98 (613)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC----
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHHH
Confidence 468999999999999999999999974 0 0 00000 011347999998888777642
Q ss_pred ---CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccc
Q psy7590 59 ---KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 59 ---~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
++|++||+||..... ..+.++....+++|+.++.++.+++ ++.+..++|++||.+.+...
T Consensus 99 ~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~---------- 168 (613)
T 3oml_A 99 AFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN---------- 168 (613)
T ss_dssp ------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCC----------
T ss_pred HCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC----------
Confidence 699999999975421 1233455778999999999999998 45556699999998543211
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcc
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNV 170 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v 170 (358)
+....|+.+|...+.+.+.++.+. |+.+..+.|+.+
T Consensus 169 ------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 169 ------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred ------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence 112279999999999988887654 899999999753
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.26 E-value=8.7e-11 Score=110.57 Aligned_cols=154 Identities=14% Similarity=0.019 Sum_probs=107.9
Q ss_pred CCEEEEEcCCC--hhHHHHHHHHHHccccCC-----------------------------CCceeeecccccCCCH--H-
Q psy7590 4 EKIILVTGGTG--LVGKAIEKIVKEEEKRDD-----------------------------ETWIFVSSKEADLSNL--E- 49 (358)
Q Consensus 4 ~~~VlItGatG--~lG~~l~~~L~~~g~~~~-----------------------------~~~~~~~~~~~Dl~~~--~- 49 (358)
.+++|||||++ -||.+++++|.++|++-. .....+..+.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 46899999875 899999999999987311 1111234455666655 4
Q ss_pred -----------------HHHHHHhcc-----CCcEEEEcccccC----Cc-cccccchhhHHHHHHHHHHHHHHHHHhcC
Q psy7590 50 -----------------STQQLFSKY-----KPTHVIHLAAMVG----GL-FHNMSHNLDFFRVNMKINDNVLDTSYKQG 102 (358)
Q Consensus 50 -----------------~~~~~~~~~-----~~d~Vih~a~~~~----~~-~~~~~~~~~~~~~nv~~~~~ll~aa~~~~ 102 (358)
++.++++.. ++|++||+||... +. ..+.+.....+++|+.++..+.+++...-
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 666665432 6999999998631 11 12233456789999999999999987652
Q ss_pred C--CEEEEeeccceecCCCCCCCccccccCCCCCCCCc-chHHHHHHHHHHHHHHHhh----cCceEEEEecCcccCC
Q psy7590 103 V--KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF-GYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 103 v--~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~-~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v~G~ 173 (358)
. .++|++||...+.. .|... .|+.||...+.+.+.++.+ .|+.+..+.|+.|--+
T Consensus 162 ~~~g~Iv~isS~~~~~~----------------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 162 KPQSSIISLTYHASQKV----------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp EEEEEEEEEECGGGTSC----------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred hhCCeEEEEeCccccCC----------------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 1 38999999865321 12221 6999999999888776554 4899999999887543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.1e-08 Score=100.56 Aligned_cols=149 Identities=16% Similarity=0.156 Sum_probs=102.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----CCCCc-----------eeeecccccC-CCHHHH-HHHHhcc-CCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----DDETW-----------IFVSSKEADL-SNLEST-QQLFSKY-KPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----~~~~~-----------~~~~~~~~Dl-~~~~~~-~~~~~~~-~~d~Vih 65 (358)
.+.++||||++-||.++++.|.++|.+ ..... ..+..+.+|+ .+.+.+ .++.+.+ ++|++||
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLVn 401 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILVN 401 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEEE
Confidence 357999999999999999999999974 11100 1122335666 444433 2333322 6999999
Q ss_pred cccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 66 LAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 66 ~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+||..... ..+.++....+++|+.++..+.+++.. .+-.++|++||...+-. .|...
T Consensus 402 NAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~----------------~~~~~ 465 (604)
T 2et6_A 402 NAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYG----------------NFGQA 465 (604)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSC----------------CTTBH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC----------------CCCCh
Confidence 99975321 112334567899999999988888753 34458999999854311 11223
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPC 168 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~ 168 (358)
.|+.||.....+.+.++.+ .|+.+..|-|+
T Consensus 466 ~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG 498 (604)
T 2et6_A 466 NYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence 7999999999888877665 48999999997
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.8e-08 Score=111.72 Aligned_cols=151 Identities=13% Similarity=0.069 Sum_probs=110.5
Q ss_pred CCEEEEEcCCCh-hHHHHHHHHHHcccc-------CCCC---------------ceeeecccccCCCHHHHHHHHhc---
Q psy7590 4 EKIILVTGGTGL-VGKAIEKIVKEEEKR-------DDET---------------WIFVSSKEADLSNLESTQQLFSK--- 57 (358)
Q Consensus 4 ~~~VlItGatG~-lG~~l~~~L~~~g~~-------~~~~---------------~~~~~~~~~Dl~~~~~~~~~~~~--- 57 (358)
.+++|||||+|. ||.++++.|++.|.+ .... ...+.++.+|++|++++.++++.
T Consensus 675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~ 754 (1887)
T 2uv8_A 675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD 754 (1887)
T ss_dssp TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 468999999998 999999999999974 1100 12345678999999999888753
Q ss_pred ------c--CCcEEEEcccccCCc--cc--c--ccchhhHHHHHHHHHHHHHHHHHhcC------CCEEEEeeccceecC
Q psy7590 58 ------Y--KPTHVIHLAAMVGGL--FH--N--MSHNLDFFRVNMKINDNVLDTSYKQG------VKKVVSCLSTCIFPD 117 (358)
Q Consensus 58 ------~--~~d~Vih~a~~~~~~--~~--~--~~~~~~~~~~nv~~~~~ll~aa~~~~------v~r~V~~SS~~vy~~ 117 (358)
+ ++|++||+||..... .. . .+.....+.+|+.++..+.++++... -.++|++||...+..
T Consensus 755 ~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g 834 (1887)
T 2uv8_A 755 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG 834 (1887)
T ss_dssp CTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS
T ss_pred hccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC
Confidence 2 499999999975421 11 1 23346789999999999999885432 148999999743211
Q ss_pred CCCCCCccccccCCCCCCCCcchHHHHHHHHHH-HHHHHhhcC--ceEEEEecCcccC
Q psy7590 118 KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL-NKAYYQQHG--VTYTSVIPCNVFG 172 (358)
Q Consensus 118 ~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~-~~~~~~~~g--~~~~ilRp~~v~G 172 (358)
... .|+.+|...+.+ .+.+++..+ +.++.+.||++-+
T Consensus 835 -----------------g~~-aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 835 -----------------GDG-MYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp -----------------CBT-THHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred -----------------CCc-hHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 112 699999999998 555555443 9999999999875
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.89 E-value=3.1e-09 Score=100.02 Aligned_cols=162 Identities=13% Similarity=0.053 Sum_probs=104.6
Q ss_pred CCC-CCEEEEEcCCChhHHHHHHHHHHccccCCC---Cceeeec----------------------ccccCCCHHHHHHH
Q psy7590 1 MAE-EKIILVTGGTGLVGKAIEKIVKEEEKRDDE---TWIFVSS----------------------KEADLSNLESTQQL 54 (358)
Q Consensus 1 m~~-~~~VlItGatG~lG~~l~~~L~~~g~~~~~---~~~~~~~----------------------~~~Dl~~~~~~~~~ 54 (358)
|.+ .|||+||||+|++|++++..|+..+.-... ....++. ...|+....++.++
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~a 80 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTA 80 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHH
Confidence 533 479999999999999999999987641100 0111100 01233333455667
Q ss_pred HhccCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CC-EEEEeeccceecCCCCCCCccccccCCC
Q psy7590 55 FSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VK-KVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 55 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
++ ++|+|||+|+... ....+..++...|+..++++++++.+.+ .+ +||++|...-.- .....+..+ .
T Consensus 81 l~--~aD~Vi~~ag~~~---~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~---t~~~~~~~~---~ 149 (329)
T 1b8p_A 81 FK--DADVALLVGARPR---GPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTN---AYIAMKSAP---S 149 (329)
T ss_dssp TT--TCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH---HHHHHHTCT---T
T ss_pred hC--CCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHH---HHHHHHHcC---C
Confidence 77 6999999999754 2224556789999999999999999985 66 899888632000 000000000 0
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 174 (358)
..+.+ .++.+++...++....++..|++...++...|+|.+
T Consensus 150 ~p~~~-v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H 190 (329)
T 1b8p_A 150 LPAKN-FTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH 190 (329)
T ss_dssp SCGGG-EEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred CCHHH-EEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence 11123 578888888888888888889887778877788854
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-08 Score=112.62 Aligned_cols=150 Identities=13% Similarity=0.049 Sum_probs=107.9
Q ss_pred CCEEEEEcCCCh-hHHHHHHHHHHcccc-------CCCC---------------ceeeecccccCCCHHHHHHHHhc---
Q psy7590 4 EKIILVTGGTGL-VGKAIEKIVKEEEKR-------DDET---------------WIFVSSKEADLSNLESTQQLFSK--- 57 (358)
Q Consensus 4 ~~~VlItGatG~-lG~~l~~~L~~~g~~-------~~~~---------------~~~~~~~~~Dl~~~~~~~~~~~~--- 57 (358)
.++||||||+|. ||.++++.|++.|.+ .... ...+.++.+|++|++++.++++.
T Consensus 652 gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~ 731 (1878)
T 2uv9_A 652 GKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYD 731 (1878)
T ss_dssp TCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 468999999999 999999999999974 1100 12345678999999999888763
Q ss_pred ----c--CCcEEEEcccccCCc--ccc----ccchhhHHHHHHHHHHHHHHHHHhc------CCCEEEEeeccceecCCC
Q psy7590 58 ----Y--KPTHVIHLAAMVGGL--FHN----MSHNLDFFRVNMKINDNVLDTSYKQ------GVKKVVSCLSTCIFPDKT 119 (358)
Q Consensus 58 ----~--~~d~Vih~a~~~~~~--~~~----~~~~~~~~~~nv~~~~~ll~aa~~~------~v~r~V~~SS~~vy~~~~ 119 (358)
+ ++|+|||+||..... ... .+.....+.+|+.++..++++++.. +-.+||++||...+..
T Consensus 732 ~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g-- 809 (1878)
T 2uv9_A 732 TKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG-- 809 (1878)
T ss_dssp SSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--
T ss_pred hhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--
Confidence 2 489999999975321 111 1334678999999999988774321 1248999999743211
Q ss_pred CCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh-c--CceEEEEecCccc
Q psy7590 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ-H--GVTYTSVIPCNVF 171 (358)
Q Consensus 120 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~-~--g~~~~ilRp~~v~ 171 (358)
... .|+.+|...+.+.+.+... . ++.++.+.||++-
T Consensus 810 ---------------g~~-aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 810 ---------------NDG-LYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp ---------------CCS-SHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred ---------------Cch-HHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 012 6999999999987655432 1 3999999999886
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.85 E-value=7.4e-09 Score=108.30 Aligned_cols=150 Identities=21% Similarity=0.210 Sum_probs=112.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHH-Hcccc-------C---CCC-----------ceeeecccccCCCHHHHHHHHhcc---
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVK-EEEKR-------D---DET-----------WIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~-~~g~~-------~---~~~-----------~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
.+++|||||+|-||..+++.|. ++|.+ . ... ...+..+.+|++|++++.++++..
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~ 609 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDE 609 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Confidence 4689999999999999999999 78863 1 111 123556789999999999998753
Q ss_pred -CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccce-ecCCCCCCCccccccCCCC
Q psy7590 59 -KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCI-FPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~v-y~~~~~~~~~E~~~~~~~~ 133 (358)
++|+|||+|+...... .+.+.....+++|+.|+.++.+++.. .. +||.+||.+. +|.
T Consensus 610 ~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~l-~iV~~SS~ag~~g~---------------- 671 (795)
T 3slk_A 610 HPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-DV-ALVLFSSVSGVLGS---------------- 671 (795)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-TS-EEEEEEETHHHHTC----------------
T ss_pred CCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-CC-EEEEEccHHhcCCC----------------
Confidence 5899999999754211 12234567889999999999999833 24 8999999854 332
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~ 173 (358)
|....|+.+|...+.+.++... .|+++++|-|+.+-.+
T Consensus 672 -~g~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 672 -GGQGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEH 709 (795)
T ss_dssp -SSCHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCC
T ss_pred -CCCHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcc
Confidence 1222799999988888877654 4999999999877543
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.81 E-value=3.7e-09 Score=113.99 Aligned_cols=151 Identities=13% Similarity=0.062 Sum_probs=106.6
Q ss_pred CCEEEEEcCCCh-hHHHHHHHHHHcccc-------CCCC---------------ceeeecccccCCCHHHHHHHHhc---
Q psy7590 4 EKIILVTGGTGL-VGKAIEKIVKEEEKR-------DDET---------------WIFVSSKEADLSNLESTQQLFSK--- 57 (358)
Q Consensus 4 ~~~VlItGatG~-lG~~l~~~L~~~g~~-------~~~~---------------~~~~~~~~~Dl~~~~~~~~~~~~--- 57 (358)
.+++|||||+|. ||.++++.|+++|.+ .... ...+..+.+|++|++++.++++.
T Consensus 476 GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e 555 (1688)
T 2pff_A 476 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD 555 (1688)
T ss_dssp SCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHS
T ss_pred CCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 357999999998 999999999999873 1110 12345678999999999888753
Q ss_pred ------c--CCcEEEEcccccCCc--ccc----ccchhhHHHHHHHHHHHHHHHHHhc------CCCEEEEeeccceecC
Q psy7590 58 ------Y--KPTHVIHLAAMVGGL--FHN----MSHNLDFFRVNMKINDNVLDTSYKQ------GVKKVVSCLSTCIFPD 117 (358)
Q Consensus 58 ------~--~~d~Vih~a~~~~~~--~~~----~~~~~~~~~~nv~~~~~ll~aa~~~------~v~r~V~~SS~~vy~~ 117 (358)
. ++|+|||+||..... ... .+.....+++|+.++..++++++.. +-.+||++||...+.
T Consensus 556 ~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~- 634 (1688)
T 2pff_A 556 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF- 634 (1688)
T ss_dssp CTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTS-
T ss_pred hccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhcc-
Confidence 2 489999999975321 111 2334678899999999999988332 114799999974321
Q ss_pred CCCCCCccccccCCCCCCCCcchHHHHHHHHHH-HHHHHhhcC--ceEEEEecCcccC
Q psy7590 118 KTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL-NKAYYQQHG--VTYTSVIPCNVFG 172 (358)
Q Consensus 118 ~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~-~~~~~~~~g--~~~~ilRp~~v~G 172 (358)
+ ... .|+.||...+.+ .+..++..+ +.+..+.|+.+-+
T Consensus 635 --------------G--g~s-aYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 635 --------------G--GDG-MYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp --------------S--CBT-THHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred --------------C--Cch-HHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 1 112 699999999998 443333332 7888888888764
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=2.7e-07 Score=88.17 Aligned_cols=156 Identities=16% Similarity=-0.029 Sum_probs=104.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH-cccc------CCCCc-----------------------eeeecccccCCCHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKE-EEKR------DDETW-----------------------IFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~-~g~~------~~~~~-----------------------~~~~~~~~Dl~~~~~~~~ 53 (358)
.|++|||||++-||.++++.|.+ .|.+ ..... ..+..+.+|+++++++.+
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 126 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQL 126 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 46899999999999999999999 8863 11110 012346789999999888
Q ss_pred HHhcc-----CCcEEEEccccc---------------CCc----------------------cccccchhhHHHHHHHHH
Q psy7590 54 LFSKY-----KPTHVIHLAAMV---------------GGL----------------------FHNMSHNLDFFRVNMKIN 91 (358)
Q Consensus 54 ~~~~~-----~~d~Vih~a~~~---------------~~~----------------------~~~~~~~~~~~~~nv~~~ 91 (358)
+++.. ++|++||+||.. .+. ..+.++....+++|..+.
T Consensus 127 ~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~ 206 (405)
T 3zu3_A 127 TIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGED 206 (405)
T ss_dssp HHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred HHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhH
Confidence 77642 699999999863 010 012233445667776665
Q ss_pred H-HHHHHHHhcC----CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---c-CceE
Q psy7590 92 D-NVLDTSYKQG----VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---H-GVTY 162 (358)
Q Consensus 92 ~-~ll~aa~~~~----v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~-g~~~ 162 (358)
. .+..++.... -.++|.+||....-.. +.... ..|+.+|...+.+.+..+.+ . |+++
T Consensus 207 ~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~-------------p~~~~-~aY~AaKaal~~ltrsLA~Ela~~~GIRV 272 (405)
T 3zu3_A 207 WQMWIDALLDAGVLAEGAQTTAFTYLGEKITH-------------DIYWN-GSIGAAKKDLDQKVLAIRESLAAHGGGDA 272 (405)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT-------------TTTTT-SHHHHHHHHHHHHHHHHHHHHHTTTSCEE
T ss_pred HHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC-------------CCccc-hHHHHHHHHHHHHHHHHHHHhCcccCeEE
Confidence 4 4555544322 1379999997542110 11111 27999999999988888765 4 8899
Q ss_pred EEEecCcccCC
Q psy7590 163 TSVIPCNVFGP 173 (358)
Q Consensus 163 ~ilRp~~v~G~ 173 (358)
.++-|+.+--+
T Consensus 273 NaVaPG~i~T~ 283 (405)
T 3zu3_A 273 RVSVLKAVVSQ 283 (405)
T ss_dssp EEEECCCCCCH
T ss_pred EEEEeCCCcCc
Confidence 99999877543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.67 E-value=7.6e-08 Score=75.61 Aligned_cols=83 Identities=18% Similarity=0.204 Sum_probs=63.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc-cc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE-KR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g-~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
||+|+|+|+ |++|+++++.|++.| ++ ...+ ...+..+.+|+.+.+++.+++. ++|+|||+++..
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~~~~~- 80 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALG--GFDAVISAAPFF- 80 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTT--TCSEEEECSCGG-
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHc--CCCEEEECCCch-
Confidence 468999999 999999999999999 63 1111 1133456889999999999988 699999998532
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEE
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~ 108 (358)
....++++|.+.++++|..
T Consensus 81 ------------------~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 81 ------------------LTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp ------------------GHHHHHHHHHHTTCEEECC
T ss_pred ------------------hhHHHHHHHHHhCCCEEEe
Confidence 1356889999999865543
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=2.4e-08 Score=93.28 Aligned_cols=155 Identities=13% Similarity=0.105 Sum_probs=94.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceee-------ecc-------------cccCCCHH-HHHHHHhccCCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV-------SSK-------------EADLSNLE-STQQLFSKYKPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~-------~~~-------------~~Dl~~~~-~~~~~~~~~~~d~V 63 (358)
|||+||||+|++|++++..|+..+......+..+ +.. ..++.+.. ++.++++ ++|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~--gaD~V 78 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIID--ESDVV 78 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGT--TCSEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhC--CCCEE
Confidence 4899999999999999999998764110111111 000 01121111 2345566 69999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH-
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH- 142 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~- 142 (358)
||+|+... ........+...|+.+++++++++++++ +++|+++|--+.- +.+-........+.. .+|.
T Consensus 79 i~~Ag~~~---~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~------~t~~~~k~~~~p~~r-viG~g 147 (313)
T 1hye_A 79 IITSGVPR---KEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDV------MTYKALVDSKFERNQ-VFGLG 147 (313)
T ss_dssp EECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHH------HHHHHHHHHCCCTTS-EEECT
T ss_pred EECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHH------HHHHHHHhhCcChhc-EEEeC
Confidence 99999753 1223456789999999999999999999 8888887742210 000000000122223 5666
Q ss_pred HHHHHHHHHHHHHhhcCceEEEEecCcccCC
Q psy7590 143 AKRMLDVLNKAYYQQHGVTYTSVIPCNVFGP 173 (358)
Q Consensus 143 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~ 173 (358)
+.+...++....++..|++...++. .+.|.
T Consensus 148 t~LD~~r~~~~la~~lgv~~~~v~~-~v~G~ 177 (313)
T 1hye_A 148 THLDSLRFKVAIAKFFGVHIDEVRT-RIIGE 177 (313)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGEEC-CEEEC
T ss_pred ccHHHHHHHHHHHHHhCcCHHHeEE-EEeec
Confidence 6666777777777777776555554 55664
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.63 E-value=9.6e-08 Score=89.63 Aligned_cols=103 Identities=16% Similarity=0.147 Sum_probs=72.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc--cc----C-CCCceee--ecc----cccC---CCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE--KR----D-DETWIFV--SSK----EADL---SNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g--~~----~-~~~~~~~--~~~----~~Dl---~~~~~~~~~~~~~~~d~Vih~a 67 (358)
+|||+|+||+|++|.+++..|+.+| ++ + ... ... +.- ..++ .+..++.++++ ++|+|||+|
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~~~~v~~~~~t~d~~~al~--gaDvVi~~a 84 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDTGAVVRGFLGQQQLEAALT--GMDLIIVPA 84 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCSSCEEEEEESHHHHHHHHT--TCSEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccccceEEEEeCCCCHHHHcC--CCCEEEEcC
Confidence 4699999999999999999999877 31 0 100 000 000 0011 12456777888 599999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
+.... .......+...|+.+++++++++.+.+++.+|+++|-
T Consensus 85 g~~~~---~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 85 GVPRK---PGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp CCCCC---SSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred CcCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 96531 2234467799999999999999999998878888763
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.62 E-value=3.4e-08 Score=91.83 Aligned_cols=101 Identities=17% Similarity=0.136 Sum_probs=68.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec---------ccccCCCHHH----------HHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS---------KEADLSNLES----------TQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~---------~~~Dl~~~~~----------~~~~~~~~~~d~Vih 65 (358)
|||+||||+|++|++++..|+..+... ....++. ...|+.+... -.++++ ++|+|||
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~--el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~--~aDvVi~ 76 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIAD--EVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTA--GSDVVVI 76 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCS--EEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGT--TCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCC--EEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhC--CCCEEEE
Confidence 489999999999999999998876411 1111111 1122222100 012344 6999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
+|+.... .......+...|+.+++++++++.+.+.+.+|+++|-
T Consensus 77 ~ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 77 TAGIPRQ---PGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp CCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred cCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 9997531 2234456899999999999999999998888888764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.61 E-value=2.1e-07 Score=94.45 Aligned_cols=148 Identities=14% Similarity=0.172 Sum_probs=101.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC---------CCce----ee----ecccccCCCHHHHHHHH----h
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD---------ETWI----FV----SSKEADLSNLESTQQLF----S 56 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~---------~~~~----~~----~~~~~Dl~~~~~~~~~~----~ 56 (358)
.+.++||||++-||+++++.|.++|.+ .. .... .+ ....+|+.|.+++.+++ +
T Consensus 8 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~~ 87 (604)
T 2et6_A 8 DKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAVK 87 (604)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHH
Confidence 357999999999999999999999974 10 1000 00 00134666664433333 3
Q ss_pred cc-CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccce-ecCCCCCCCcccc
Q psy7590 57 KY-KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCI-FPDKTTYPIDETM 127 (358)
Q Consensus 57 ~~-~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~v-y~~~~~~~~~E~~ 127 (358)
.+ ++|++||+||..... ..+.++....+++|+.++..+.+++.. .+-.++|++||... ++.
T Consensus 88 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~---------- 157 (604)
T 2et6_A 88 NFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN---------- 157 (604)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC----------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC----------
Confidence 22 699999999974321 112334567899999999888887743 34458999999854 321
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecC
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPC 168 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~ 168 (358)
|....|+.+|.....+.+..+.+ +|+.+..|-|+
T Consensus 158 -------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 158 -------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp -------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred -------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 12227999999999888877665 48999999996
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=98.59 E-value=2.9e-07 Score=88.63 Aligned_cols=156 Identities=15% Similarity=-0.006 Sum_probs=101.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH-cccc------CCCCc-----------------------eeeecccccCCCHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKE-EEKR------DDETW-----------------------IFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~-~g~~------~~~~~-----------------------~~~~~~~~Dl~~~~~~~~ 53 (358)
.|++|||||++-||.++++.|.+ .|.+ ..... ..+..+.+|+++++++.+
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 140 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ 140 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 46899999999999999999999 8873 11110 012346789999998877
Q ss_pred HHhc----c--CCcEEEEccccc------------C---Ccc----------------------ccccchhhHHHHHHHH
Q psy7590 54 LFSK----Y--KPTHVIHLAAMV------------G---GLF----------------------HNMSHNLDFFRVNMKI 90 (358)
Q Consensus 54 ~~~~----~--~~d~Vih~a~~~------------~---~~~----------------------~~~~~~~~~~~~nv~~ 90 (358)
+++. + ++|++||+||.. + +.. .+.++....+++|..+
T Consensus 141 ~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~ 220 (422)
T 3s8m_A 141 VIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQ 220 (422)
T ss_dssp HHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchh
Confidence 7642 2 689999999862 0 100 0112223445555544
Q ss_pred HH-HHHHHHHhcCC----CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceE
Q psy7590 91 ND-NVLDTSYKQGV----KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTY 162 (358)
Q Consensus 91 ~~-~ll~aa~~~~v----~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~ 162 (358)
.. .+..++..... .++|.+||....-.. +.. ....|+.||...+.+.+..+.+. |+++
T Consensus 221 ~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~-------------p~~-~~~aY~ASKaAl~~lTrsLA~Ela~~GIRV 286 (422)
T 3s8m_A 221 DWELWIDALEGAGVLADGARSVAFSYIGTEITW-------------PIY-WHGALGKAKVDLDRTAQRLNARLAKHGGGA 286 (422)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH-------------HHH-TSHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC-------------CCc-cchHHHHHHHHHHHHHHHHHHHhCccCEEE
Confidence 43 55565544321 379999997532100 100 01279999999998888877653 8999
Q ss_pred EEEecCcccCC
Q psy7590 163 TSVIPCNVFGP 173 (358)
Q Consensus 163 ~ilRp~~v~G~ 173 (358)
.++-|+.|--+
T Consensus 287 NaVaPG~i~T~ 297 (422)
T 3s8m_A 287 NVAVLKSVVTQ 297 (422)
T ss_dssp EEEEECCCCCT
T ss_pred EEEEcCCCcCh
Confidence 99999887644
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=3.2e-07 Score=88.74 Aligned_cols=156 Identities=11% Similarity=-0.025 Sum_probs=100.3
Q ss_pred CCEEEEEcCCChhHHH--HHHHHHHccccC------CCC-----------------------ceeeecccccCCCHHHHH
Q psy7590 4 EKIILVTGGTGLVGKA--IEKIVKEEEKRD------DET-----------------------WIFVSSKEADLSNLESTQ 52 (358)
Q Consensus 4 ~~~VlItGatG~lG~~--l~~~L~~~g~~~------~~~-----------------------~~~~~~~~~Dl~~~~~~~ 52 (358)
.+++|||||++-||.+ ++..|.+.|.+- ... ...+..+.+|+++++++.
T Consensus 60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~ 139 (418)
T 4eue_A 60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD 139 (418)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence 4689999999999999 999999888731 100 012345689999999888
Q ss_pred HHHhcc-----CCcEEEEccccc---------------CCcc----------------------ccccchhhHHHHHHHH
Q psy7590 53 QLFSKY-----KPTHVIHLAAMV---------------GGLF----------------------HNMSHNLDFFRVNMKI 90 (358)
Q Consensus 53 ~~~~~~-----~~d~Vih~a~~~---------------~~~~----------------------~~~~~~~~~~~~nv~~ 90 (358)
++++.. ++|++||+||.. .+.. ...+.....+++|..+
T Consensus 140 ~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~ 219 (418)
T 4eue_A 140 KVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGE 219 (418)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHH
Confidence 877542 699999999863 0000 0112223344444443
Q ss_pred HH-HHHHHHHhcCC----CEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh----cCce
Q psy7590 91 ND-NVLDTSYKQGV----KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ----HGVT 161 (358)
Q Consensus 91 ~~-~ll~aa~~~~v----~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~----~g~~ 161 (358)
.. .++.++..... .++|.+||.+..-.. +.... ..|+.+|...+.+.+..+.+ .|+.
T Consensus 220 ~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~-------------p~~~~-~aY~ASKaAL~~ltrsLA~ELa~~~GIr 285 (418)
T 4eue_A 220 DWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY-------------KIYRE-GTIGIAKKDLEDKAKLINEKLNRVIGGR 285 (418)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT-------------TTTTT-SHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred HHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC-------------Ccccc-HHHHHHHHHHHHHHHHHHHHhCCccCeE
Confidence 33 44555544331 368888887432110 11111 27999999999888777654 5799
Q ss_pred EEEEecCcccCC
Q psy7590 162 YTSVIPCNVFGP 173 (358)
Q Consensus 162 ~~ilRp~~v~G~ 173 (358)
+.++-|+.|--+
T Consensus 286 VN~V~PG~v~T~ 297 (418)
T 4eue_A 286 AFVSVNKALVTK 297 (418)
T ss_dssp EEEEECCCCCCH
T ss_pred EEEEECCcCcCh
Confidence 999999877543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=1.7e-06 Score=100.31 Aligned_cols=151 Identities=14% Similarity=0.115 Sum_probs=105.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CCCC--------------ceeeecccccCCCHHHHHHHHhcc----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DDET--------------WIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
.+++|||||+|-||.++++.|.++|.+ ...+ ...+..+.+|++|++++.++++..
T Consensus 1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g 1963 (2512)
T 2vz8_A 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLG 1963 (2512)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 468999999999999999999999974 1111 113445689999999998877542
Q ss_pred CCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 59 KPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++|+|||+|+..... ..+.++....+++|+.|+.++.+++... ...+||.+||....-.
T Consensus 1964 ~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g---------------- 2027 (2512)
T 2vz8_A 1964 PVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRG---------------- 2027 (2512)
T ss_dssp CEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTT----------------
T ss_pred CCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCC----------------
Confidence 689999999964311 1233455678899999999998887654 2358999999854321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCccc
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVF 171 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~ 171 (358)
.+....|+.+|...+.+.+.... .|++...+-.+.+-
T Consensus 2028 ~~g~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2028 NAGQANYGFANSAMERICEKRRH-DGLPGLAVQWGAIG 2064 (2512)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBC
T ss_pred CCCcHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcC
Confidence 11222799999999999886544 48998888876543
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=8.3e-06 Score=65.98 Aligned_cols=89 Identities=12% Similarity=0.010 Sum_probs=61.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C-----CCCceeeecccccCCCHHHHHHH-HhccCCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D-----DETWIFVSSKEADLSNLESTQQL-FSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~-----~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~a~~~~ 71 (358)
|++|+|+|+ |.+|+.+++.|.+.|++ . .........+.+|.++++.+.++ +. ++|+||++++..
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~~~~~- 81 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIR--NFEYVIVAIGAN- 81 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGG--GCSEEEECCCSC-
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCC--CCCEEEECCCCc-
Confidence 557999997 99999999999999873 0 01111233457899888877765 44 599999886531
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
.+.|. .+...+++.+++++|..++.
T Consensus 82 ------------~~~~~----~~~~~~~~~~~~~ii~~~~~ 106 (144)
T 2hmt_A 82 ------------IQAST----LTTLLLKELDIPNIWVKAQN 106 (144)
T ss_dssp ------------HHHHH----HHHHHHHHTTCSEEEEECCS
T ss_pred ------------hHHHH----HHHHHHHHcCCCeEEEEeCC
Confidence 12232 36677788888777765544
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.98 E-value=6.4e-06 Score=80.53 Aligned_cols=96 Identities=13% Similarity=0.124 Sum_probs=64.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------C-------CCCceeeecccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------D-------DETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~-------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
|++++|+|+| +|++|+++++.|.+.|++ . ......+..+.+|+++.+++.+++. ++|+|||+++
T Consensus 1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~--~~DvVIn~a~ 77 (450)
T 1ff9_A 1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISLIP 77 (450)
T ss_dssp -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEECCC
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc--CCcEEEECCc
Confidence 3567999998 899999999999988863 1 0011123445789999999999988 6999999998
Q ss_pred ccCCccccccchhhHHHH--H-------HHHHHHHHHHHHhcCCC
Q psy7590 69 MVGGLFHNMSHNLDFFRV--N-------MKINDNVLDTSYKQGVK 104 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~--n-------v~~~~~ll~aa~~~~v~ 104 (358)
.... . .-.....+. | ...+.+++++|+++|++
T Consensus 78 ~~~~---~-~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~ 118 (450)
T 1ff9_A 78 YTFH---A-TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT 118 (450)
T ss_dssp --CH---H-HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred cccc---h-HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence 6321 0 001111111 1 23577899999999974
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=5.9e-06 Score=77.52 Aligned_cols=157 Identities=16% Similarity=0.170 Sum_probs=90.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCC---ceeeecc---------cccCCC-----------HHHHHHHHhccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDET---WIFVSSK---------EADLSN-----------LESTQQLFSKYKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~---~~~~~~~---------~~Dl~~-----------~~~~~~~~~~~~~ 60 (358)
.+||+||||+|++|++++..|+..+.-.... ...++.. ..|+.+ .....+.++ ++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~--da 80 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFK--DL 80 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTT--TC
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhC--CC
Confidence 4699999999999999999998776421100 1111110 011111 122344555 69
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC--EEEEeeccc---eecCCCCCCCccccccCCCCCC
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK--KVVSCLSTC---IFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~--r~V~~SS~~---vy~~~~~~~~~E~~~~~~~~~p 135 (358)
|+|||+||... ..-.+..+.++.|+..++++++++.+++.+ +++.+|-.. +|- .-+.. ...|
T Consensus 81 DvVvitAg~pr---kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~------~~~~~----~~~p 147 (333)
T 5mdh_A 81 DVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLT------ASKSA----PSIP 147 (333)
T ss_dssp SEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH------HHHTC----TTSC
T ss_pred CEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHH------HHHHc----CCCC
Confidence 99999998643 122456678999999999999999999865 466655421 000 00000 1112
Q ss_pred CCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
.+..-+.+-+..-++-...+++.|++...++-..|.|.+.
T Consensus 148 ~~~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~vV~GeHg 187 (333)
T 5mdh_A 148 KENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHS 187 (333)
T ss_dssp GGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred cCEEEEEEhHHHHHHHHHHHHHhCcCHHHeeecEEEEcCC
Confidence 1111123444445555555666676655565444567654
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=2.3e-05 Score=71.43 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=29.7
Q ss_pred chHHHHHHHHHHHHHHHh------------------hcCceEEEEecCcccCCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQ------------------QHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~------------------~~g~~~~ilRp~~v~G~~~ 175 (358)
++|.++.++|.+...... ..++.+.++|.+.|+|.+.
T Consensus 167 PSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~h~ 221 (273)
T 1dih_A 167 PSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHT 221 (273)
T ss_dssp SCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCccEE
Confidence 799999999998765432 2468999999999999764
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.89 E-value=4.2e-05 Score=73.74 Aligned_cols=84 Identities=17% Similarity=0.248 Sum_probs=62.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc---c------CCCC-------c-----eeeecccccCCCHHHHHHHHhccCCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK---R------DDET-------W-----IFVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~---~------~~~~-------~-----~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
|++|+|+|| |++|+.+++.|.+.+. . ...+ . ..+..+.+|++|.+++.++++..++|+
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 468999998 9999999999999872 1 0000 0 124455889999999999999766999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEE
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~ 108 (358)
|||+++... ...++++|.++++. +|-
T Consensus 80 Vin~ag~~~-------------------~~~v~~a~l~~g~~-vvD 105 (405)
T 4ina_A 80 VLNIALPYQ-------------------DLTIMEACLRTGVP-YLD 105 (405)
T ss_dssp EEECSCGGG-------------------HHHHHHHHHHHTCC-EEE
T ss_pred EEECCCccc-------------------ChHHHHHHHHhCCC-EEE
Confidence 999987531 13578899999874 543
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=3.9e-05 Score=71.40 Aligned_cols=99 Identities=14% Similarity=0.134 Sum_probs=67.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeee-----ccccc---------CCC---HHHHHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVS-----SKEAD---------LSN---LESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~-----~~~~D---------l~~---~~~~~~~~~~~~~d~Vih~a 67 (358)
|||+|+||+|++|..++..|+..+.- .....++ -...| +.. ..++.++++ ++|+||+++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~--~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~--~aDvVvi~a 76 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLV--SRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLK--GCDVVVIPA 76 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTC--SEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHT--TCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC--cEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhC--CCCEEEECC
Confidence 48999999999999999999977631 0011110 00111 211 135667787 599999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+.... ......+....|+..++.+++.+.+...+ ++|++|
T Consensus 77 g~~~~---~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s 117 (314)
T 1mld_A 77 GVPRK---PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (314)
T ss_dssp SCCCC---TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CcCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 87541 22344567899999999999999998755 677654
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=0.00016 Score=84.38 Aligned_cols=154 Identities=14% Similarity=0.049 Sum_probs=100.9
Q ss_pred CCCEEEEEcCCCh-hHHHHHHHHHHcccc------CCCC----------------ceeeecccccCCCHHHHHHHHhc--
Q psy7590 3 EEKIILVTGGTGL-VGKAIEKIVKEEEKR------DDET----------------WIFVSSKEADLSNLESTQQLFSK-- 57 (358)
Q Consensus 3 ~~~~VlItGatG~-lG~~l~~~L~~~g~~------~~~~----------------~~~~~~~~~Dl~~~~~~~~~~~~-- 57 (358)
+.|.+|||||++- ||.++++.|++.|.+ .... ...+..+.+|+++++++.++++.
T Consensus 2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~ 2214 (3089)
T 3zen_D 2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVG 2214 (3089)
T ss_dssp CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 3568999999998 999999999999974 1111 11234568999999999887642
Q ss_pred -------cCCcEEEEcccc----cCC--c--cccccch----hhHHHHHHHHHHHHHHHHHhc----CCC---EEEEeec
Q psy7590 58 -------YKPTHVIHLAAM----VGG--L--FHNMSHN----LDFFRVNMKINDNVLDTSYKQ----GVK---KVVSCLS 111 (358)
Q Consensus 58 -------~~~d~Vih~a~~----~~~--~--~~~~~~~----~~~~~~nv~~~~~ll~aa~~~----~v~---r~V~~SS 111 (358)
.++|++||+||. ... . .....+. +..+++|+.++..++.++... +.. .+|..+|
T Consensus 2215 ~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~s 2294 (3089)
T 3zen_D 2215 TEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGS 2294 (3089)
T ss_dssp SCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEEC
T ss_pred hhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECC
Confidence 158999999997 110 0 0011222 234888999888888776542 221 2222222
Q ss_pred cceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh--c--CceEEEEecCcccCC
Q psy7590 112 TCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ--H--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 112 ~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~--~--g~~~~ilRp~~v~G~ 173 (358)
. ..+ ..+....|+.||...+.+.+.++.+ . ++.++.+.|+++-+.
T Consensus 2295 s-~~g----------------~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT 2343 (3089)
T 3zen_D 2295 P-NRG----------------MFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGT 2343 (3089)
T ss_dssp S-STT----------------SCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECS
T ss_pred c-ccc----------------cCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCC
Confidence 1 111 0011126999999999999988877 3 588888999888644
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.84 E-value=4.7e-05 Score=72.25 Aligned_cols=84 Identities=21% Similarity=0.249 Sum_probs=59.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc-----cCCCC----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK-----RDDET----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLF 74 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~-----~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~ 74 (358)
.|||+|+|| |++|+.+++.|.+... +...+ ...+..+..|+.|.+++.++++ ++|+||+++.+..
T Consensus 16 ~mkilvlGa-G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~--~~DvVi~~~p~~~--- 89 (365)
T 3abi_A 16 HMKVLILGA-GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMK--EFELVIGALPGFL--- 89 (365)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHT--TCSEEEECCCGGG---
T ss_pred ccEEEEECC-CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHh--CCCEEEEecCCcc---
Confidence 468999998 9999999999876532 00000 0112334789999999999999 5899999875421
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEee
Q psy7590 75 HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110 (358)
Q Consensus 75 ~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~S 110 (358)
...++++|.++|+ ++|=+|
T Consensus 90 ----------------~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 90 ----------------GFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp ----------------HHHHHHHHHHHTC-EEEECC
T ss_pred ----------------cchHHHHHHhcCc-ceEeee
Confidence 1248899999997 676544
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.73 E-value=4.9e-05 Score=61.63 Aligned_cols=64 Identities=14% Similarity=0.057 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----CceeeecccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
+|++|+|+|+ |.+|+++++.|.+.|++ ... ....+..+.+|.++++.+.++--. ++|+||.+.+
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~-~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLE-GVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCT-TCSEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcc-cCCEEEEecC
Confidence 3568999997 99999999999999984 110 011344568999999988876322 6999996644
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00011 Score=58.99 Aligned_cols=85 Identities=18% Similarity=0.243 Sum_probs=56.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc------eeeecccccCCCHHHHHHH-HhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW------IFVSSKEADLSNLESTQQL-FSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~------~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~a~~~ 70 (358)
.|+|+|+|+ |.+|+.+++.|.+.|++ ..... ..+..+.+|..+++.+.++ +. ++|+||++....
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~--~~d~vi~~~~~~ 80 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIE--DADMYIAVTGKE 80 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTT--TCSEEEECCSCH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcc--cCCEEEEeeCCc
Confidence 468999986 99999999999998873 11100 1233457888888877655 44 599999884321
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
..|. .+.+.++..+++++|..
T Consensus 81 --------------~~~~----~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 81 --------------EVNL----MSSLLAKSYGINKTIAR 101 (140)
T ss_dssp --------------HHHH----HHHHHHHHTTCCCEEEE
T ss_pred --------------hHHH----HHHHHHHHcCCCEEEEE
Confidence 1222 35667777777777743
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=4.9e-05 Score=69.67 Aligned_cols=64 Identities=20% Similarity=0.204 Sum_probs=50.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc----------eeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW----------IFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~----------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.+++|||||+|.+|++++..|++.|.+ ...+. ..+..+.+|+++++++.++++ .+|+|||++
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~DvlVn~a 196 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK--GAHFVFTAG 196 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH--hCCEEEECC
Confidence 468999999999999999999999873 11100 122345689999999999988 489999999
Q ss_pred cc
Q psy7590 68 AM 69 (358)
Q Consensus 68 ~~ 69 (358)
+.
T Consensus 197 g~ 198 (287)
T 1lu9_A 197 AI 198 (287)
T ss_dssp CT
T ss_pred Cc
Confidence 85
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00016 Score=67.99 Aligned_cols=89 Identities=17% Similarity=0.220 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccC---------CC--CceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRD---------DE--TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~---------~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
||++|||+|.||||++|+.+++.|.++++.. .. +...+.-...++.+.+ . +.+. ++|+||.+.+.
T Consensus 3 M~m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~-~-~~~~--~~DvV~~a~g~ 78 (340)
T 2hjs_A 3 MSQPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVD-S-FDFS--SVGLAFFAAAA 78 (340)
T ss_dssp --CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGG-G-CCGG--GCSEEEECSCH
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCC-H-HHhc--CCCEEEEcCCc
Confidence 5545799999999999999999999765421 00 1000100111222211 1 1234 59999987553
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
. .+..+++.+.++|++ +|.+|+..
T Consensus 79 ~-------------------~s~~~a~~~~~aG~k-vId~Sa~~ 102 (340)
T 2hjs_A 79 E-------------------VSRAHAERARAAGCS-VIDLSGAL 102 (340)
T ss_dssp H-------------------HHHHHHHHHHHTTCE-EEETTCTT
T ss_pred H-------------------HHHHHHHHHHHCCCE-EEEeCCCC
Confidence 1 244577788888985 78788764
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0003 Score=66.09 Aligned_cols=102 Identities=9% Similarity=0.126 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------cc----------ccCCCHHHHHHHHhccCCcEEE
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KE----------ADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~----------~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
|.++||.|+|++|++|+.++..|+..|... ....++. .. .++....+..++++ ++|+||
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~--evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~--dADvVv 81 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTP--NLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALT--DAKYIV 81 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCS--CEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHT--TEEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCC--EEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhC--CCCEEE
Confidence 456799999999999999999999887411 1111100 00 11111134456676 599999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCE--EEEee
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK--VVSCL 110 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r--~V~~S 110 (358)
.+||... ..-..-.+.+..|+...+.+.+.+.+...+. ++.+|
T Consensus 82 itaG~p~---kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs 126 (343)
T 3fi9_A 82 SSGGAPR---KEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF 126 (343)
T ss_dssp ECCC----------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred EccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence 9998643 1223456789999999999999999987554 44443
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00029 Score=66.31 Aligned_cols=86 Identities=10% Similarity=0.074 Sum_probs=52.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc-c-----C-CCCceeeec----cc--cc--CCCHHHHHHHHhccCCcEEEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK-R-----D-DETWIFVSS----KE--AD--LSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~-~-----~-~~~~~~~~~----~~--~D--l~~~~~~~~~~~~~~~d~Vih 65 (358)
||+|+||.|.||||++|+.+++.|.++.. + + ......+.. .. .| +.+.+ + +. ++|+||.
T Consensus 1 M~~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~--~vDvV~~ 74 (345)
T 2ozp_A 1 MTGKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LE--PADILVL 74 (345)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CC--CCSEEEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hc--CCCEEEE
Confidence 88888999999999999999999987653 1 1 011001110 00 12 22322 2 33 6999998
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
+.+.. .+..++..+.++|+ ++|-+|+.
T Consensus 75 a~g~~-------------------~s~~~a~~~~~aG~-~VId~Sa~ 101 (345)
T 2ozp_A 75 ALPHG-------------------VFAREFDRYSALAP-VLVDLSAD 101 (345)
T ss_dssp CCCTT-------------------HHHHTHHHHHTTCS-EEEECSST
T ss_pred cCCcH-------------------HHHHHHHHHHHCCC-EEEEcCcc
Confidence 76532 23456677778887 58888875
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00065 Score=61.70 Aligned_cols=84 Identities=13% Similarity=0.187 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccc-c-------CCCCcee--eecc---cccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEK-R-------DDETWIF--VSSK---EADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~-~-------~~~~~~~--~~~~---~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
|+|+||.|+|++|.+|+.+++.+.+... + ....... +..+ ..++.-.+++.+++. ++|+||++..
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~--~~DVVIDfT~ 82 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCA--EADYLIDFTL 82 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHH--HCSEEEECSC
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhc--CCCEEEEcCC
Confidence 4678999999999999999999987632 1 1110000 0000 002222345566666 4999999853
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+. .+...++.|.++|++ +|
T Consensus 83 p~-------------------a~~~~~~~al~~G~~-vV 101 (272)
T 4f3y_A 83 PE-------------------GTLVHLDAALRHDVK-LV 101 (272)
T ss_dssp HH-------------------HHHHHHHHHHHHTCE-EE
T ss_pred HH-------------------HHHHHHHHHHHcCCC-EE
Confidence 21 334567778888874 55
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0014 Score=53.71 Aligned_cols=60 Identities=7% Similarity=0.075 Sum_probs=46.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCC-----Cc-----eeeecccccCCCHHHHHHH-HhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDE-----TW-----IFVSSKEADLSNLESTQQL-FSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~-----~~-----~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~ 66 (358)
.++|+|+|+ |.+|+++++.|.+.|++ ... .. ..+..+.+|.++++.+.++ ++ ++|+||-+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~ 78 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID--RCRAILAL 78 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT--TCSEEEEC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChh--hCCEEEEe
Confidence 358999995 99999999999999874 211 11 1356678999999998887 66 59999965
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0022 Score=52.74 Aligned_cols=62 Identities=16% Similarity=0.246 Sum_probs=44.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------ceeeecccccCCCHHHHHHH-HhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------WIFVSSKEADLSNLESTQQL-FSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~a~ 68 (358)
.++|+|+|+ |.+|..+++.|.+.|++ ...+ ......+.+|..+++.+.++ +. ++|+||.+.+
T Consensus 19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~--~ad~Vi~~~~ 93 (155)
T 2g1u_A 19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGME--KADMVFAFTN 93 (155)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGG--GCSEEEECSS
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcc--cCCEEEEEeC
Confidence 368999995 99999999999999873 1111 12233456788888777655 44 5999997744
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00043 Score=65.25 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
+||||+|.||||++|+.|++.|++++
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~ 33 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHP 33 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCC
Confidence 46799999999999999999999887
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00089 Score=58.98 Aligned_cols=69 Identities=17% Similarity=0.146 Sum_probs=47.7
Q ss_pred CCCEEEEEcC----------------CChhHHHHHHHHHHcccc-----CCCCce-eeecccccCCCHHHHHHHHhc--c
Q psy7590 3 EEKIILVTGG----------------TGLVGKAIEKIVKEEEKR-----DDETWI-FVSSKEADLSNLESTQQLFSK--Y 58 (358)
Q Consensus 3 ~~~~VlItGa----------------tG~lG~~l~~~L~~~g~~-----~~~~~~-~~~~~~~Dl~~~~~~~~~~~~--~ 58 (358)
+.++|||||| ||.+|.++++.|.++|.+ .+.... .......|+.+.+++.+.+.. .
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~~~g~~~~dv~~~~~~~~~v~~~~~ 86 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQ 86 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEEEECCSHHHHHHHHHHHGG
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccccCCCCeEEccCcHHHHHHHHHHhcC
Confidence 3578999999 799999999999999984 111110 001124677887766555432 1
Q ss_pred CCcEEEEcccccC
Q psy7590 59 KPTHVIHLAAMVG 71 (358)
Q Consensus 59 ~~d~Vih~a~~~~ 71 (358)
++|++||+||...
T Consensus 87 ~~Dili~~Aav~d 99 (226)
T 1u7z_A 87 QQNIFIGCAAVAD 99 (226)
T ss_dssp GCSEEEECCBCCS
T ss_pred CCCEEEECCcccC
Confidence 5999999999754
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.001 Score=58.78 Aligned_cols=68 Identities=21% Similarity=0.179 Sum_probs=45.5
Q ss_pred CCEEEEEcC----------------CChhHHHHHHHHHHcccc------CCCCce--eeecccccCCCHHHHHHHHhc--
Q psy7590 4 EKIILVTGG----------------TGLVGKAIEKIVKEEEKR------DDETWI--FVSSKEADLSNLESTQQLFSK-- 57 (358)
Q Consensus 4 ~~~VlItGa----------------tG~lG~~l~~~L~~~g~~------~~~~~~--~~~~~~~Dl~~~~~~~~~~~~-- 57 (358)
.|+|||||| ||.+|.+|+++|+++|.+ +..... .......|+...+++.+++..
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~~ 82 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQERV 82 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHHG
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHhc
Confidence 579999999 999999999999999984 111000 001122455565555444432
Q ss_pred cCCcEEEEcccccC
Q psy7590 58 YKPTHVIHLAAMVG 71 (358)
Q Consensus 58 ~~~d~Vih~a~~~~ 71 (358)
.++|++||+||...
T Consensus 83 ~~~Dili~aAAvsD 96 (232)
T 2gk4_A 83 QDYQVLIHSMAVSD 96 (232)
T ss_dssp GGCSEEEECSBCCS
T ss_pred CCCCEEEEcCcccc
Confidence 15999999999754
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0011 Score=64.92 Aligned_cols=64 Identities=14% Similarity=0.193 Sum_probs=48.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHc-ccc------CCCCc------eeeecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEE-EKR------DDETW------IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~-g~~------~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
+++|+|+|+ |.+|+.++..|++. +.+ ...+. ..+..+.+|+.+.+++.+++. ++|+|||+++..
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~--~~DvVIn~tp~~ 99 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA--DNDVVISLIPYT 99 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH--TSSEEEECSCGG
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc--CCCEEEECCchh
Confidence 568999997 99999999999988 442 11110 123344689999999999888 599999998753
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0016 Score=59.51 Aligned_cols=85 Identities=7% Similarity=0.120 Sum_probs=50.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcc-cc-------CCCCceeee--cc----cccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEE-KR-------DDETWIFVS--SK----EADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g-~~-------~~~~~~~~~--~~----~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|++|+||.|.|++|.+|+.+++.+.+.. .+ ......+.+ .+ ..++.-.+++.+++. ++|+||++
T Consensus 18 m~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~--~aDVvIDF 95 (288)
T 3ijp_A 18 GPGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFS--NTEGILDF 95 (288)
T ss_dssp ---CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTT--SCSEEEEC
T ss_pred ccCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhc--CCCEEEEc
Confidence 6666799999999999999999998653 21 111100000 00 112222235666676 59999988
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
..+. .+...++.|.++|+ .+|
T Consensus 96 T~p~-------------------a~~~~~~~~l~~Gv-~vV 116 (288)
T 3ijp_A 96 SQPQ-------------------ASVLYANYAAQKSL-IHI 116 (288)
T ss_dssp SCHH-------------------HHHHHHHHHHHHTC-EEE
T ss_pred CCHH-------------------HHHHHHHHHHHcCC-CEE
Confidence 5431 33456777888887 455
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.008 Score=53.49 Aligned_cols=27 Identities=19% Similarity=0.379 Sum_probs=22.7
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|+||||+|+|+ |.+|+.+++.+.+.+.
T Consensus 1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~ 27 (243)
T 3qy9_A 1 MASMKILLIGY-GAMNQRVARLAEEKGH 27 (243)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred CCceEEEEECc-CHHHHHHHHHHHhCCC
Confidence 35789999999 9999999999998754
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0013 Score=62.18 Aligned_cols=29 Identities=17% Similarity=0.334 Sum_probs=23.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||+++||+|.||+|++|+.+++.|.++..
T Consensus 13 ~M~~~kV~IiGAtG~iG~~llr~L~~~p~ 41 (359)
T 1xyg_A 13 PEKDIRIGLLGASGYTGAEIVRLLANHPH 41 (359)
T ss_dssp --CCEEEEEECCSSHHHHHHHHHHHTCSS
T ss_pred cccCcEEEEECcCCHHHHHHHHHHHcCCC
Confidence 45556899999999999999999998753
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.017 Score=53.66 Aligned_cols=102 Identities=16% Similarity=0.187 Sum_probs=63.0
Q ss_pred CCC-CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCH-----------HHHHHHHhccCCc
Q psy7590 1 MAE-EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNL-----------ESTQQLFSKYKPT 61 (358)
Q Consensus 1 m~~-~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~-----------~~~~~~~~~~~~d 61 (358)
|++ +|||.|+|+ |.+|+.++..|+..|.-. ....++. ...|+.+. ..-.+++. ++|
T Consensus 1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~--~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~--~aD 75 (326)
T 3pqe_A 1 MNKHVNKVALIGA-GFVGSSYAFALINQGITD--ELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCK--DAD 75 (326)
T ss_dssp -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCS--EEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGT--TCS
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCc--eEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhC--CCC
Confidence 544 679999996 999999999999887510 0110000 00011000 00012444 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+||.+++... ..-....+.+..|+...+.+.+.+.+...+ .++.+|
T Consensus 76 vVvi~ag~p~---kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 76 IVCICAGANQ---KPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp EEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEecccCC---CCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 9999998643 122345678899999999999999998755 344333
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0025 Score=55.44 Aligned_cols=59 Identities=19% Similarity=0.177 Sum_probs=44.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC------CceeeecccccCCCHHHHHHH-HhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE------TWIFVSSKEADLSNLESTQQL-FSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~------~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~ 66 (358)
|+|+|+|+ |.+|+++++.|.+.|++ ... ....+..+.+|.++++.+.++ ++ ++|+||-+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~ 72 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVS--KNDVVVIL 72 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCC--TTCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcc--cCCEEEEe
Confidence 47999995 99999999999999874 111 111345678999999988877 44 68999944
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0064 Score=55.71 Aligned_cols=99 Identities=13% Similarity=0.138 Sum_probs=62.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeee-----cccccCCCHHH------------HHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVS-----SKEADLSNLES------------TQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~-----~~~~Dl~~~~~------------~~~~~~~~~~d~Vih~a 67 (358)
|||.|+|| |.+|+.++-.|+.++.-....+..+. -...|+.+... --+.++ ++|+||-+|
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~--~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLK--GSEIIVVTA 77 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGT--TCSEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhC--CCCEEEEec
Confidence 58999995 99999999999887652111111000 00111111000 002344 699999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
|... ..-..-.+.++.|..-.+.+.+++.++..+.+|.+
T Consensus 78 G~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlv 116 (294)
T 2x0j_A 78 GLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV 116 (294)
T ss_dssp CCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred CCCC---CCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 9653 22346678899999999999999999986644433
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0038 Score=57.79 Aligned_cols=98 Identities=22% Similarity=0.231 Sum_probs=63.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc-ccc------C-CCCceeeecccccCCCH-----------HHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE-EKR------D-DETWIFVSSKEADLSNL-----------ESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~-g~~------~-~~~~~~~~~~~~Dl~~~-----------~~~~~~~~~~~~d~Vih 65 (358)
|||.|+||+|.+|..++..|... +.. + .....+. ..|+.+. ....+.++ ++|+||-
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~---a~Dl~~~~~~~~v~~~~~~~~~~~~~--~aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGV---AVDLSHIPTAVKIKGFSGEDATPALE--GADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHH---HHHHHTSCSSEEEEEECSSCCHHHHT--TCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhH---HHHhhCCCCCceEEEecCCCcHHHhC--CCCEEEE
Confidence 48999999999999999988775 431 0 0011110 1111110 01234566 5999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+|+... ..-..-.+.++.|....+.+.+++.+...+ .++.+|
T Consensus 76 ~ag~~r---kpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt 118 (312)
T 3hhp_A 76 SAGVAR---KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (312)
T ss_dssp CCSCSC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred eCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence 988643 222456778999999999999999988755 455443
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0063 Score=56.90 Aligned_cols=87 Identities=18% Similarity=0.206 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc--------C-CC--CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR--------D-DE--TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~--------~-~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
+|+||.|.||||++|+.+++.|.++++. + .. +...+.-....+.+.+. ..+. ++|+||-|.+..
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~--~~~~--~vDvVf~a~g~~- 76 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEE--FDWS--QVHIALFSAGGE- 76 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGG--CCGG--GCSEEEECSCHH-
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCCh--HHhc--CCCEEEECCCch-
Confidence 4679999999999999999999987321 1 10 10001000111111111 1233 589999775431
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
.+......+.++|+ ++|-.|+..
T Consensus 77 ------------------~s~~~a~~~~~~G~-~vId~s~~~ 99 (336)
T 2r00_A 77 ------------------LSAKWAPIAAEAGV-VVIDNTSHF 99 (336)
T ss_dssp ------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred ------------------HHHHHHHHHHHcCC-EEEEcCCcc
Confidence 24456677778887 588888763
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.006 Score=51.40 Aligned_cols=60 Identities=13% Similarity=0.132 Sum_probs=43.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc-ccc------CCCC-----ceeeecccccCCCHHHHHHH--HhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE-EKR------DDET-----WIFVSSKEADLSNLESTQQL--FSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~-g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~--~~~~~~d~Vih~a 67 (358)
++|+|+| .|.+|..+++.|.+. |++ ...+ ..++..+.+|.++++.+.++ +. ++|+||.+.
T Consensus 40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~--~ad~vi~~~ 113 (183)
T 3c85_A 40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTG--HVKLVLLAM 113 (183)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCC--CCCEEEECC
T ss_pred CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCC--CCCEEEEeC
Confidence 5899998 699999999999998 873 1111 11334457899898877766 55 589999663
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0039 Score=58.95 Aligned_cols=83 Identities=22% Similarity=0.214 Sum_probs=50.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc--------C-CCCceeeecccccCC----CHHHHHHHHhccCCcEEEEcccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR--------D-DETWIFVSSKEADLS----NLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~--------~-~~~~~~~~~~~~Dl~----~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
+||.|.||||++|..|++.|.++++. + ......+.+...|+. +++ .+. ++|+||.|.+..
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~----~~~--~~Dvvf~a~~~~- 75 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTET----AFE--GVDIALFSAGSS- 75 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCTT----TTT--TCSEEEECSCHH-
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCHH----Hhc--CCCEEEECCChH-
Confidence 59999999999999999988886441 1 010011111001111 111 234 599999876521
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
.+......+.++|+ ++|=.|+..
T Consensus 76 ------------------~s~~~a~~~~~~G~-~vIDlSa~~ 98 (366)
T 3pwk_A 76 ------------------TSAKYAPYAVKAGV-VVVDNTSYF 98 (366)
T ss_dssp ------------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred ------------------hHHHHHHHHHHCCC-EEEEcCCcc
Confidence 23456666777888 588888763
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.044 Score=50.61 Aligned_cols=93 Identities=15% Similarity=0.171 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHH------------------------HHHHHHhcc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLE------------------------STQQLFSKY 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~------------------------~~~~~~~~~ 58 (358)
++|||.|+|| |.+|..++..|+..+.- ... +-.|+. ++ ...++++
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~--~ei-----~L~Di~-~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~-- 73 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIV--DEL-----VIIDLD-TEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCH-- 73 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSC--SEE-----EEECSC-HHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGT--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCC--CEE-----EEEeCC-hhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhC--
Confidence 3469999998 99999999999877631 011 111211 00 0122344
Q ss_pred CCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 59 KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
++|+||-+++... ..-..-......|+...+.+.+.+.+...+.+|.+
T Consensus 74 ~aDvVvi~ag~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv 121 (317)
T 3d0o_A 74 DADLVVICAGAAQ---KPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV 121 (317)
T ss_dssp TCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence 6999999988643 11233456789999999999999999875544433
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.021 Score=53.95 Aligned_cols=84 Identities=12% Similarity=0.131 Sum_probs=49.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH-cccc--------CCCCceee------ecccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKE-EEKR--------DDETWIFV------SSKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~-~g~~--------~~~~~~~~------~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
|+||.|.||+|++|+.|++.|+. +++. .......+ +....++.+++. +. ++|+||.|.+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~----~~--~~DvVf~a~g 74 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA----LK--ALDIIVTCQG 74 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH----HH--TCSEEEECSC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHH----hc--CCCEEEECCC
Confidence 35899999999999999995444 4331 11010011 111223334433 34 5999998755
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeecc
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLST 112 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~ 112 (358)
. ..+..+...+.++|++ .+|-.||.
T Consensus 75 ~-------------------~~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 75 G-------------------DYTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp H-------------------HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred c-------------------hhHHHHHHHHHHCCCCEEEEcCChh
Confidence 2 2344566777788875 45544543
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.017 Score=53.48 Aligned_cols=100 Identities=17% Similarity=0.170 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec---------ccccCCCHHHH------------HHHHhccCC
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS---------KEADLSNLEST------------QQLFSKYKP 60 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~---------~~~Dl~~~~~~------------~~~~~~~~~ 60 (358)
|+++||.|+|+ |.+|..++..|...|+ . ....++. ...|+.+...+ .+.+. ++
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~-~--~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~--~a 79 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKEL-A--DVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTA--DS 79 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTC-C--EEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGT--TC
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCC-C--eEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhC--CC
Confidence 44569999996 9999999999998875 1 1111100 01122111100 12233 69
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
|+||-+++.... .-....+.++.|+...+.+.+.+.+.+.+ .++.+|
T Consensus 80 DvVIiaag~p~k---pg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs 127 (315)
T 3tl2_A 80 DVVVITAGIARK---PGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT 127 (315)
T ss_dssp SEEEECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence 999999886431 22345678899999999999999998755 455444
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0043 Score=58.53 Aligned_cols=27 Identities=22% Similarity=0.356 Sum_probs=22.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
++++||.|+||||++|..|++.|.++.
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP 31 (359)
T 4dpl_A 5 RRTLKAAILGATGLVGIEYVRMLSNHP 31 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCS
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCC
Confidence 345689999999999999999887654
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0043 Score=58.53 Aligned_cols=27 Identities=22% Similarity=0.356 Sum_probs=22.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
++++||.|+||||++|..|++.|.++.
T Consensus 5 ~~~~kVaIvGATGyvG~eLlrlL~~hP 31 (359)
T 4dpk_A 5 RRTLKAAILGATGLVGIEYVRMLSNHP 31 (359)
T ss_dssp -CCEEEEETTTTSTTHHHHHHHHTTCS
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCC
Confidence 345689999999999999999887654
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=96.08 E-value=0.025 Score=53.51 Aligned_cols=159 Identities=13% Similarity=0.095 Sum_probs=90.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccCC---CCceeeec---------ccccCCCHH-----------HHHHHHhc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDD---ETWIFVSS---------KEADLSNLE-----------STQQLFSK 57 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~~---~~~~~~~~---------~~~Dl~~~~-----------~~~~~~~~ 57 (358)
|.+.+||.|+||+|.+|++++-.|+..+.-.. ..+..++. ...|+.+-. ...+.++
T Consensus 29 ~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~- 107 (375)
T 7mdh_A 29 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFE- 107 (375)
T ss_dssp CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT-
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhC-
Confidence 44567999999999999999999988764221 11111100 111221111 1234555
Q ss_pred cCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc-CCC-EEEEeeccceecCCCCCCCccccc----cCC
Q psy7590 58 YKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ-GVK-KVVSCLSTCIFPDKTTYPIDETMV----HNG 131 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~v~-r~V~~SS~~vy~~~~~~~~~E~~~----~~~ 131 (358)
++|+||-+|+... ..-..-.+.++.|+.-.+.+.+++.+. +.+ .++.+|-. ++--.. ...
T Consensus 108 -daDvVVitag~pr---kpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNP----------vD~~t~ia~k~sg 173 (375)
T 7mdh_A 108 -DVDWALLIGAKPR---GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNP----------CNTNALICLKNAP 173 (375)
T ss_dssp -TCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS----------HHHHHHHHHHTCT
T ss_pred -CCCEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCc----------hhHHHHHHHHHcC
Confidence 6999999988643 222456778999999999999999885 433 45544432 111000 000
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
.+.+.. .-+.+.+..-++....+++.|++...++-..|.|.+.
T Consensus 174 ~~~~rv-ig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHg 216 (375)
T 7mdh_A 174 DIPAKN-FHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHS 216 (375)
T ss_dssp TSCGGG-EEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSS
T ss_pred CCCccE-EEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCC
Confidence 111122 2334555555555566677777655555435677654
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.05 E-value=0.038 Score=51.70 Aligned_cols=156 Identities=15% Similarity=0.180 Sum_probs=91.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCC---Cceeeec---------ccccCCC-----------HHHHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDE---TWIFVSS---------KEADLSN-----------LESTQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~---~~~~~~~---------~~~Dl~~-----------~~~~~~~~~~~~~d 61 (358)
-||.|+||+|.||+.|+-.|.....-... .+..++. +..|+.+ ..+..++++ ++|
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~--~ad 102 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFD--GVA 102 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTT--TCS
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhC--CCC
Confidence 48999999999999999888765321100 1111110 0111111 011234555 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-CC-EEEEeeccceecCCCCCCCccccc-----cCCCCC
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-VK-KVVSCLSTCIFPDKTTYPIDETMV-----HNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-v~-r~V~~SS~~vy~~~~~~~~~E~~~-----~~~~~~ 134 (358)
+||-+|+... ..-..-.++++.|..-.+.+.+++.+.. .. .++.+|-. ++-..+ ..+.+.
T Consensus 103 vVvi~aG~pr---kpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP----------vd~~~~i~~~~~~g~~~ 169 (345)
T 4h7p_A 103 IAIMCGAFPR---KAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP----------ANTNALILLKSAQGKLN 169 (345)
T ss_dssp EEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS----------HHHHHHHHHHHTTTCSC
T ss_pred EEEECCCCCC---CCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC----------cchHHHHHHHHccCCCC
Confidence 9999999753 2234567789999999999999998854 22 35545432 111000 000223
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDN 176 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~ 176 (358)
+.. .-+.+.+..-++-...+++.|++...+.-..|.|.+..
T Consensus 170 ~r~-i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~ 210 (345)
T 4h7p_A 170 PRH-VTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS 210 (345)
T ss_dssp GGG-EEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST
T ss_pred cce-eeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC
Confidence 333 44556666666666667777887777766667777643
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.016 Score=51.52 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=20.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~ 27 (358)
|||+|+|++|.+|+.+++.+.+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~ 23 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA 23 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 48999999999999999998865
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=96.00 E-value=0.0069 Score=55.91 Aligned_cols=97 Identities=15% Similarity=0.199 Sum_probs=59.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCH-------------HHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNL-------------ESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~-------------~~~~~~~~~~~~d~Vi 64 (358)
|||.|+|| |.+|..++..|...|+- ....++. ...|+.+. .+. ++++ ++|+||
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~---~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~--~aD~Vi 75 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELG---DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTA--NSDVIV 75 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCS---EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGT--TCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCC---eEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHC--CCCEEE
Confidence 59999998 99999999999988751 0111100 00111110 112 3344 699999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
.+++.... ...........|+...+.+.+.+.+...+.+|.+.|
T Consensus 76 ~a~g~p~~---~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 76 VTSGAPRK---PGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp ECCCC-----------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred EcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 99886431 112234567889999999999999887665554444
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.0052 Score=57.21 Aligned_cols=98 Identities=16% Similarity=0.185 Sum_probs=51.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCHH----------HHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNLE----------STQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~~----------~~~~~~~~~~~d~Vih~ 66 (358)
++||.|+|+ |.+|+.++..|+..+.-. ....++. ...|+.+.. ...+++. ++|+||.+
T Consensus 9 ~~kV~ViGa-G~vG~~~a~~l~~~~~~~--el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~--~aDiVvi~ 83 (326)
T 3vku_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQ--EIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAK--DADLVVIT 83 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCS--EEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGT--TCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCC--eEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhc--CCCEEEEC
Confidence 569999996 999999999999886510 0110000 000111100 0013444 69999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEe
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSC 109 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~ 109 (358)
|+... ..-..-.+.++.|+...+.+.+.+.+...+ .++.+
T Consensus 84 ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvv 124 (326)
T 3vku_A 84 AGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA 124 (326)
T ss_dssp CCCC-------------------CHHHHHHHHHTTTCCSEEEEC
T ss_pred CCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence 98643 112345567899999999999999998755 34433
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.90 E-value=0.013 Score=54.37 Aligned_cols=100 Identities=16% Similarity=0.107 Sum_probs=59.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc--------CCCCceee--ecc-------cccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR--------DDETWIFV--SSK-------EADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~--------~~~~~~~~--~~~-------~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
+|||.|+|+ |.+|..++..|+..+.- ...+.... +.- ...+.. .. .++++ ++|+||.+
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~-~~a~~--~aDvVii~ 81 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-GD-YSDVK--DCDVIVVT 81 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---C-GGGGT--TCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-CC-HHHhC--CCCEEEEc
Confidence 468999997 99999999999988751 11111100 000 000111 11 23455 69999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
++... .....-.+....|+...+.+.+.+.+...+.+|.+.|
T Consensus 82 ~g~p~---k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (318)
T 1y6j_A 82 AGANR---KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 123 (318)
T ss_dssp CCC---------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred CCCCC---CCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence 88643 1112345678999999999999999876554443433
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=95.69 E-value=0.017 Score=53.55 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=60.4
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc-c------CCCCceee----ec----c--cccCCCHHHHHHHHhccCCcEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK-R------DDETWIFV----SS----K--EADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~-~------~~~~~~~~----~~----~--~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
|+.+|||.|+|| |.+|..++..|...|+ + ...+.... .. . ...+....+. ++++ ++|+|
T Consensus 1 m~~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~--~aD~V 76 (322)
T 1t2d_A 1 MAPKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLA--GADVV 76 (322)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGT--TCSEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhC--CCCEE
Confidence 777889999998 9999999999998876 1 00000000 00 0 0001000112 3344 69999
Q ss_pred EEcccccCCcccccc----chhhHHHHHHHHHHHHHHHHHhcCCC-EEEEe
Q psy7590 64 IHLAAMVGGLFHNMS----HNLDFFRVNMKINDNVLDTSYKQGVK-KVVSC 109 (358)
Q Consensus 64 ih~a~~~~~~~~~~~----~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~ 109 (358)
|-+++.... .... .-......|+...+.+.+.+.+...+ .+|.+
T Consensus 77 i~a~g~p~k--~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 125 (322)
T 1t2d_A 77 IVTAGFTKA--PGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV 125 (322)
T ss_dssp EECCSCSSC--TTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred EEeCCCCCC--CCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 999875421 1111 13456888888889999988887644 34433
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.0093 Score=56.63 Aligned_cols=26 Identities=27% Similarity=0.300 Sum_probs=22.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
+++||.|.||||++|..|++.|.++.
T Consensus 18 ~~~kVaIvGAtG~vG~ell~lL~~hp 43 (381)
T 3hsk_A 18 SVKKAGVLGATGSVGQRFILLLSKHP 43 (381)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCS
T ss_pred CccEEEEECCCChHHHHHHHHHHcCC
Confidence 44689999999999999999888764
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=95.60 E-value=0.019 Score=54.39 Aligned_cols=67 Identities=19% Similarity=0.101 Sum_probs=49.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHH-Hcccc---------CCCC--------------------ceeeecccccCCCHHHHHH
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVK-EEEKR---------DDET--------------------WIFVSSKEADLSNLESTQQ 53 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~-~~g~~---------~~~~--------------------~~~~~~~~~Dl~~~~~~~~ 53 (358)
.|++|||||+.-+|.+.+..|. ..|-. ...+ ......+.+|+++++++.+
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~ 129 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ 129 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence 5789999999999999988887 44531 1111 0112345899999999988
Q ss_pred HHhcc-----CCcEEEEccccc
Q psy7590 54 LFSKY-----KPTHVIHLAAMV 70 (358)
Q Consensus 54 ~~~~~-----~~d~Vih~a~~~ 70 (358)
+++.. ++|++||.+|..
T Consensus 130 vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 130 VIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHhcCCCCEEEEecccc
Confidence 88652 799999999864
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=95.60 E-value=0.046 Score=51.63 Aligned_cols=25 Identities=24% Similarity=0.421 Sum_probs=21.3
Q ss_pred CEEEEEcCCChhHHHHHH-HHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEK-IVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~-~L~~~g~ 29 (358)
|||.|+||||++|..|++ .|.++.+
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~ 26 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDF 26 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCC
Confidence 489999999999999999 6666653
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.022 Score=52.90 Aligned_cols=99 Identities=16% Similarity=0.185 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCH-------------HHHHHHHhccCCc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNL-------------ESTQQLFSKYKPT 61 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~-------------~~~~~~~~~~~~d 61 (358)
|+++||.|+|+ |.+|..++..|+..+.. ....++. ...|+.+. .+. ++++ ++|
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~---~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~--~aD 77 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELG---DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIE--GAD 77 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCC---EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGT--TCS
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCC---eEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHC--CCC
Confidence 45679999997 99999999999988761 1111100 00011000 011 3444 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+||.+++.... .-....+.+..|+...+.+.+.+.+...+ .++.+|
T Consensus 78 iVIiaag~p~k---~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 78 VVIVTAGVPRK---PGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp EEEECCSCCCC--------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred EEEEccCcCCC---CCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence 99999886431 11234567888999999999999998755 455444
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.14 Score=47.29 Aligned_cols=99 Identities=16% Similarity=0.169 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCH-------------HHHHHHHhccCCc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNL-------------ESTQQLFSKYKPT 61 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~-------------~~~~~~~~~~~~d 61 (358)
|++|||.|+| +|.+|..++..|+..+.. ....++. ...|+.+. .+ .++++ ++|
T Consensus 3 m~~~kI~iiG-aG~vG~~~a~~l~~~~~~---~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~--~aD 75 (321)
T 3p7m_A 3 MARKKITLVG-AGNIGGTLAHLALIKQLG---DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLE--NSD 75 (321)
T ss_dssp CCCCEEEEEC-CSHHHHHHHHHHHHTTCC---EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGT--TCS
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCc---eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHC--CCC
Confidence 4567999999 599999999999987751 1111100 00011110 00 13444 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+||.+++... ..-....+.+..|+...+.+.+.+.+...+ .++.+|
T Consensus 76 vVIi~ag~p~---k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 76 VVIVTAGVPR---KPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp EEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred EEEEcCCcCC---CCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 9999988643 112345567889999999999999998755 455443
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=95.49 E-value=0.013 Score=54.66 Aligned_cols=25 Identities=20% Similarity=0.347 Sum_probs=22.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
|+||.|+||||++|..|++.|.++.
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p 28 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHP 28 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT
T ss_pred ceEEEEECCCChHHHHHHHHHHhCC
Confidence 5799999999999999999998853
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=95.43 E-value=0.082 Score=48.86 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=58.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHH-----------------------HHHHHhc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLES-----------------------TQQLFSK 57 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~-----------------------~~~~~~~ 57 (358)
|.+.+||.|+|| |.+|..++..|+..+.- -+.+-.|+ +++. -.++++
T Consensus 2 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~~~-------~el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~- 71 (318)
T 1ez4_A 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIA-------EEFVIVDV-VKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCK- 71 (318)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCC-------SEEEEECS-SHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGT-
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHcCCCC-------CEEEEEeC-CchHHHHHHHHHHHHHHhcCCeEEEECCHHHhC-
Confidence 444479999998 99999999999887641 01112222 1110 122344
Q ss_pred cCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEe
Q psy7590 58 YKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSC 109 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~ 109 (358)
++|+||.+++...- .-..-.+....|+...+.+.+.+.+...+ .+|.+
T Consensus 72 -~aDvVii~ag~~~~---~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 120 (318)
T 1ez4_A 72 -DADLVVITAGAPQK---PGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA 120 (318)
T ss_dssp -TCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred -CCCEEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence 69999999886431 11233456789999999999999998755 34433
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=95.35 E-value=0.022 Score=52.12 Aligned_cols=97 Identities=14% Similarity=0.125 Sum_probs=61.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec----c---ccc-------------CCCHHHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS----K---EAD-------------LSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~----~---~~D-------------l~~~~~~~~~~~~~~~d~Vi 64 (358)
|||.|+|+ |.+|..++..|+..+.-. ....++. . ..| +.-..+ .++++ ++|+||
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~--~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~--~aDiVV 74 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVD--EIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLK--GSEIIV 74 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCS--EEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGT--TCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCC--eEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhC--CCCEEE
Confidence 48999998 999999999998887510 0000000 0 000 000001 23455 589999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
.+++... ..-....+++..|....+.+.+.+.+.+.+ .++.+|
T Consensus 75 iaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs 118 (294)
T 1oju_A 75 VTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp ECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred ECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 9988643 122345678899999999999999998755 444444
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.067 Score=50.61 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=49.1
Q ss_pred CCEEEEEcCCChhHHHHHH-HHHHcccc--------CCCCceee-ec-----ccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEK-IVKEEEKR--------DDETWIFV-SS-----KEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~-~L~~~g~~--------~~~~~~~~-~~-----~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
.++|.|+||||++|+.|++ .|.++.+. +......+ ++ ..-++.+++ .+. ++|+||.|.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~v~~~~~~~----~~~--~vDvvf~a~~ 77 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKNETTLKDATSID----DLK--KCDVIITCQG 77 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCSCCBCEETTCHH----HHH--TCSEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCCceEEEeCCChh----Hhc--CCCEEEECCC
Confidence 3589999999999999999 66666531 11100000 01 111222222 244 5999998755
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeecc
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLST 112 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~ 112 (358)
.. .++.+...+.++|++ .+|-.|+.
T Consensus 78 ~~-------------------~s~~~~~~~~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 78 GD-------------------YTNDVFPKLRAAGWNGYWIDAASS 103 (377)
T ss_dssp HH-------------------HHHHHHHHHHHTTCCSEEEECSST
T ss_pred hH-------------------HHHHHHHHHHHCCCCEEEEeCCcc
Confidence 31 234566667778874 67766654
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=95.30 E-value=0.012 Score=47.29 Aligned_cols=60 Identities=17% Similarity=0.064 Sum_probs=44.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
++|+|+|+ |.+|..+++.|.+.|++ .... ..++..+.+|.++++.+.++--. ++|+||-+
T Consensus 8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~-~ad~vi~~ 78 (140)
T 3fwz_A 8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLE-CAKWLILT 78 (140)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGG-GCSEEEEC
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcc-cCCEEEEE
Confidence 47999995 99999999999999884 1111 12345568999999988775222 58999855
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=95.13 E-value=0.025 Score=52.97 Aligned_cols=85 Identities=16% Similarity=0.143 Sum_probs=49.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------CCCCceeeecccccCC--CHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------DDETWIFVSSKEADLS--NLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------~~~~~~~~~~~~~Dl~--~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
+||.|.||||++|..|++.|.++.+. .......+.+...|+. +.+ ...+. ++|+||.|.+..
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~--~~~~~--~~Dvvf~a~~~~--- 74 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAE--TADPS--GLDIALFSAGSA--- 74 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETT--TSCCT--TCSEEEECSCHH---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCC--HHHhc--cCCEEEECCChH---
Confidence 58999999999999999988887331 1111111111111111 111 01233 699999875532
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
.++.....+.++|+ ++|-.|+..
T Consensus 75 ----------------~s~~~a~~~~~~G~-~vID~Sa~~ 97 (344)
T 3tz6_A 75 ----------------MSKVQAPRFAAAGV-TVIDNSSAW 97 (344)
T ss_dssp ----------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred ----------------HHHHHHHHHHhCCC-EEEECCCcc
Confidence 33446666677887 588888763
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.06 E-value=0.012 Score=55.28 Aligned_cols=28 Identities=29% Similarity=0.557 Sum_probs=24.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
||+|+||.|.||+|++|+.+++.|.++.
T Consensus 1 m~~~~kV~IiGAtG~iG~~llr~L~~~p 28 (350)
T 2ep5_A 1 MADKIKVSLLGSTGMVGQKMVKMLAKHP 28 (350)
T ss_dssp -CCCEEEEEESCSSHHHHHHHHHHTTCS
T ss_pred CCCCcEEEEECcCCHHHHHHHHHHHhCC
Confidence 7778899999999999999999998763
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=95.03 E-value=0.0043 Score=53.52 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=23.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|||+|+||+|.+|+++++.|++.|+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~ 25 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGH 25 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCC
Confidence 4899999999999999999999886
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=95.03 E-value=0.03 Score=49.03 Aligned_cols=59 Identities=8% Similarity=0.015 Sum_probs=44.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-----cCCCCc----eeeecccccCCCHHHHHHH-HhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-----RDDETW----IFVSSKEADLSNLESTQQL-FSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-----~~~~~~----~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~ 66 (358)
++|+|+|+ |.+|+.+++.|.+.|+ +..... ..+..+.+|.++++.+.++ ++ ++|.||-+
T Consensus 10 ~~viI~G~-G~~G~~la~~L~~~g~v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~--~ad~vi~~ 78 (234)
T 2aef_A 10 RHVVICGW-SESTLECLRELRGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVR--GARAVIVD 78 (234)
T ss_dssp CEEEEESC-CHHHHHHHHHSTTSEEEEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCT--TCSEEEEC
T ss_pred CEEEEECC-ChHHHHHHHHHHhCCeEEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcc--hhcEEEEc
Confidence 58999996 9999999999998774 111110 2355678999999988877 55 58999955
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.027 Score=52.05 Aligned_cols=91 Identities=14% Similarity=0.169 Sum_probs=57.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCH------HH-----------------HHHHHhccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNL------ES-----------------TQQLFSKYKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~------~~-----------------~~~~~~~~~~ 60 (358)
++||.|+|+ |.+|..++..|+..+.- .. .+-.|+... .. ..++++ ++
T Consensus 6 ~~kI~IIGa-G~vG~sla~~l~~~~~~--~e-----v~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~--~a 75 (316)
T 1ldn_A 6 GARVVVIGA-GFVGASYVFALMNQGIA--DE-----IVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCR--DA 75 (316)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCC--SE-----EEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTT--TC
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCC--CE-----EEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhC--CC
Confidence 569999998 99999999999877631 01 111222110 00 012344 69
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
|+||-+++..... . ....+....|....+.+.+.+.+...+.++
T Consensus 76 DvViia~~~~~~~--g-~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~ 119 (316)
T 1ldn_A 76 DLVVICAGANQKP--G-ETRLDLVDKNIAIFRSIVESVMASGFQGLF 119 (316)
T ss_dssp SEEEECCSCCCCT--T-TCSGGGHHHHHHHHHHHHHHHHHHTCCSEE
T ss_pred CEEEEcCCCCCCC--C-CCHHHHHHcChHHHHHHHHHHHHHCCCCEE
Confidence 9999998864321 1 233456788899999999999887654333
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=94.89 E-value=0.17 Score=46.98 Aligned_cols=101 Identities=19% Similarity=0.190 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccCCCCceee-----ecccccCCC------------HHHHHHHHhccCCcEEEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV-----SSKEADLSN------------LESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~-----~~~~~Dl~~------------~~~~~~~~~~~~~d~Vih 65 (358)
..+||.|+|+ |.+|..++..|+..+.-....+..+ +-+..|+.+ ..+. +.++ ++|+||.
T Consensus 18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~--~aDiVvi 93 (331)
T 4aj2_A 18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTA--NSKLVII 93 (331)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGT--TEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhC--CCCEEEE
Confidence 3579999997 9999999999998865100000000 000001000 0011 1344 5899999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+|+... ..-..-.+.++.|+.-.+.+.+.+.+...+ .++.+|
T Consensus 94 ~aG~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt 136 (331)
T 4aj2_A 94 TAGARQ---QEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS 136 (331)
T ss_dssp CCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred ccCCCC---CCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 998643 222455678999999999999999998755 444443
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=94.80 E-value=0.069 Score=49.27 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=58.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCHHH------------HHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNLES------------TQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~~~------------~~~~~~~~~~d~Vih 65 (358)
|||.|+|+ |.+|+.++..|+..+.-. ....++. ...|+.+... ..+++. ++|+||-
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~--el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~--~aDvVii 75 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAK--EVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTE--DSDVCII 75 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSS--EEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGT--TCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCC--EEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhC--CCCEEEE
Confidence 48999996 999999999999887510 1111100 0011111100 012333 6899999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+++... ..-....+.++.|+...+.+.+.+.+...+ .++.+|
T Consensus 76 ~ag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 76 TAGLPR---SPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp CCCC----------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred CCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 988643 112345678899999999999999998755 344333
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=94.70 E-value=0.09 Score=47.87 Aligned_cols=86 Identities=14% Similarity=0.098 Sum_probs=55.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecc-----cccCCCHHHHHHHHhccCCcEEEEcccccCCcccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSK-----EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 78 (358)
.++|+|.|+||..|+.+++.+++.|++ ....++.. ...+.-..++.++.++..+|++|-+...
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~---~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~--------- 74 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTK---IVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPA--------- 74 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCH---------
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCe---EEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCH---------
Confidence 468999999999999999999988763 00011110 0112222345566654469999866322
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
..+..+++.|.+.|++.+|.+++
T Consensus 75 ----------~~~~~~~~ea~~~Gi~~vVi~t~ 97 (288)
T 1oi7_A 75 ----------PAAADAALEAAHAGIPLIVLITE 97 (288)
T ss_dssp ----------HHHHHHHHHHHHTTCSEEEECCS
T ss_pred ----------HHHHHHHHHHHHCCCCEEEEECC
Confidence 13456788888999986776554
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.58 E-value=0.027 Score=52.47 Aligned_cols=25 Identities=32% Similarity=0.503 Sum_probs=22.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|||.|.||+|++|+.|++.|.++++
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~ 25 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNF 25 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC
Confidence 4799999999999999999997655
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=94.55 E-value=0.067 Score=51.07 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=46.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc----CC---CCceee---ecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR----DD---ETWIFV---SSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~----~~---~~~~~~---~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
||.+++|+|+| +|.+|+.+++.+.+.|++ .. ...... ..+.+|..|.+.+.++.+ ++|+|+-
T Consensus 21 mm~~~~I~ilG-gG~lg~~l~~aa~~lG~~v~~~d~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~--~~d~i~~ 92 (403)
T 3k5i_A 21 MWNSRKVGVLG-GGQLGRMLVESANRLNIQVNVLDADNSPAKQISAHDGHVTGSFKEREAVRQLAK--TCDVVTA 92 (403)
T ss_dssp CCSCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEEESTTCTTGGGCCSSCCEESCTTCHHHHHHHHT--TCSEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCcHHHhccccceeecCCCCHHHHHHHHH--hCCEEEE
Confidence 67778999999 589999999999999984 11 111111 244678899999999998 4888763
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=94.55 E-value=0.054 Score=51.99 Aligned_cols=60 Identities=12% Similarity=0.173 Sum_probs=45.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----CceeeecccccCCCHHHHHHH-HhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----TWIFVSSKEADLSNLESTQQL-FSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~ 66 (358)
.++|+|+|. |.+|+.+++.|.+.|+. +.. +..++..+.+|.++++.+.++ ++ ++++||-+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~--~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAA--KAEVLINA 75 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTT--TCSEEEEC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCC--ccCEEEEC
Confidence 357999995 99999999999999874 111 112455679999999998887 45 58999855
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=94.44 E-value=0.076 Score=49.34 Aligned_cols=98 Identities=15% Similarity=0.101 Sum_probs=61.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-c------CCCCcee--ee------cc--cccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-R------DDETWIF--VS------SK--EADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-~------~~~~~~~--~~------~~--~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
|||.|+|| |.+|..++..|...|+ + ...+... .. .. ...+.-..++.++++ ++|+||-++
T Consensus 10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~--~aDiVi~a~ 86 (331)
T 1pzg_A 10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALT--GADCVIVTA 86 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHT--TCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhC--CCCEEEEcc
Confidence 58999997 9999999999998876 2 1111111 00 00 011111133444666 599999998
Q ss_pred cccCCcccccc----chhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 68 AMVGGLFHNMS----HNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 68 ~~~~~~~~~~~----~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+.... ...+ ........|+...+.+.+.+.+...+-++
T Consensus 87 g~p~~--~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~v 128 (331)
T 1pzg_A 87 GLTKV--PGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFI 128 (331)
T ss_dssp SCSSC--TTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCCC--CCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEE
Confidence 75421 1110 34567888999999999999888655344
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=94.42 E-value=0.07 Score=45.18 Aligned_cols=64 Identities=25% Similarity=0.240 Sum_probs=40.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-----eeeecccccCCCHHHH---HHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-----IFVSSKEADLSNLEST---QQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-----~~~~~~~~Dl~~~~~~---~~~~~~~~~d~Vih~a~ 68 (358)
.++|||+||+|-+|..+++.+...|.+ ...+. .... ...|..+.+.. .+.....++|+||++++
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVE-YVGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCS-EEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC-EEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 468999999999999999999988863 10000 0111 12355554333 33333336999999876
|
| >4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=94.41 E-value=0.05 Score=51.60 Aligned_cols=64 Identities=19% Similarity=0.109 Sum_probs=46.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc-----CCC-Ccee----eecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR-----DDE-TWIF----VSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~-~~~~----~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
||+++||||+|+ |.++..+++.+.+.|++ ... .... -+.+..|..|.+.+.++++..++|.|+-
T Consensus 4 m~~~~~ilI~g~-g~~~~~~~~a~~~~G~~~v~v~~~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~~~d~v~~ 77 (403)
T 4dim_A 4 MYDNKRLLILGA-GRGQLGLYKAAKELGIHTIAGTMPNAHKPCLNLADEISYMDISNPDEVEQKVKDLNLDGAAT 77 (403)
T ss_dssp --CCCEEEEECC-CGGGHHHHHHHHHHTCEEEEEECSSCCHHHHHHCSEEEECCTTCHHHHHHHTTTSCCSEEEC
T ss_pred ccCCCEEEEECC-cHhHHHHHHHHHHCCCEEEEEcCCCCCCcchhhCCeEEEecCCCHHHHHHHHHHcCCCEEEe
Confidence 788889999996 55799999999999985 111 1111 1234678889999999998888999883
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=94.31 E-value=0.29 Score=45.24 Aligned_cols=92 Identities=15% Similarity=0.182 Sum_probs=59.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHH-----------------------HHHHHhccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLES-----------------------TQQLFSKYKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~-----------------------~~~~~~~~~~ 60 (358)
.|||.|+|| |.+|..++..|+..+.- . +.+-.|+ +++. -.++++ ++
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~~--~-----el~L~Di-~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~--~a 77 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIA--Q-----EIGIVDI-FKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAK--DA 77 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCC--S-----EEEEECS-CHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGG--GC
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCC--C-----EEEEEeC-CchHhHHHHHHHHHHHHhcCCeEEEECCHHHhC--CC
Confidence 469999998 99999999999877641 0 1112222 1110 122344 59
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEe
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSC 109 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~ 109 (358)
|+||.+++... ..-..-......|+...+.+.+.+.+...+ .+|.+
T Consensus 78 DvVii~ag~~~---k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 124 (326)
T 2zqz_A 78 DLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA 124 (326)
T ss_dssp SEEEECCCCC--------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred CEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 99999988643 111334567889999999999999988754 44433
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=94.14 E-value=0.09 Score=48.40 Aligned_cols=103 Identities=20% Similarity=0.170 Sum_probs=59.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc-c------CCCCceee--ecc--------cccCCCHHHHHHHHhccCCcEE
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK-R------DDETWIFV--SSK--------EADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~-~------~~~~~~~~--~~~--------~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
|.++|||.|+|+ |.+|..++..|...|+ + ........ +.. ...+....+. ++++ ++|+|
T Consensus 1 M~~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~--~aDiV 76 (317)
T 2ewd_A 1 MIERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADIS--GSDVV 76 (317)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGT--TCSEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhC--CCCEE
Confidence 667789999997 9999999999998876 2 11000000 000 0000000111 2344 58999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
|-+++.... ......+....|....+.+++.+.+.... .+|.+|
T Consensus 77 i~avg~p~~---~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~s 121 (317)
T 2ewd_A 77 IITASIPGR---PKDDRSELLFGNARILDSVAEGVKKYCPNAFVICIT 121 (317)
T ss_dssp EECCCCSSC---CSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EEeCCCCCC---CCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 998875431 11223345677788888888888776533 344444
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=93.81 E-value=0.1 Score=49.27 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=43.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCC----CceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDE----TWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
+++|+|+| .|.+|+.+++.+.+.|++ ... ....-..+.+|..|.+.+.++++. +|+|.
T Consensus 12 ~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~--~dvi~ 78 (377)
T 3orq_A 12 GATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQK--CDVIT 78 (377)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHH--CSEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHh--CCcce
Confidence 46899999 689999999999999984 111 111113456889999999999884 89875
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=93.75 E-value=0.56 Score=41.45 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
++|+|+| .|-+|+++++.|...|.
T Consensus 32 ~~VlVvG-~Gg~G~~va~~La~~Gv 55 (249)
T 1jw9_B 32 SRVLIVG-LGGLGCAASQYLASAGV 55 (249)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC
T ss_pred CeEEEEe-eCHHHHHHHHHHHHcCC
Confidence 5899999 58899999999999986
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=93.74 E-value=0.45 Score=44.07 Aligned_cols=93 Identities=16% Similarity=0.085 Sum_probs=60.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCH--H----HHHH-----------------HHhccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNL--E----STQQ-----------------LFSKYKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~--~----~~~~-----------------~~~~~~~ 60 (358)
++||.|+|+ |.+|..++..|+..|.-. +.+-.|+... + ++.. .++ ++
T Consensus 21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~-------ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~~--da 90 (330)
T 3ldh_A 21 YNKITVVGC-DAVGMADAISVLMKDLAD-------EVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVSA--GS 90 (330)
T ss_dssp CCEEEEEST-THHHHHHHHHHHHHCCCS-------EEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSCS--SC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCC-------eEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHhC--CC
Confidence 469999998 999999999999887510 1111222110 0 0111 122 68
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCE-EEEe
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK-VVSC 109 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r-~V~~ 109 (358)
|+||-+|+... ..-..-.+....|+...+.+.+.+.+.+.+. ++.+
T Consensus 91 DiVIitaG~p~---kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvv 137 (330)
T 3ldh_A 91 KLVVITAGARQ---QEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELH 137 (330)
T ss_dssp SEEEECCSCCC---CSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred CEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeC
Confidence 99999988653 1223455688899999999999999987553 4433
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=93.71 E-value=0.18 Score=45.86 Aligned_cols=86 Identities=10% Similarity=0.096 Sum_probs=53.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecc-----cccCCCHHHHHHHHhccCCcEEEEcccccCCcccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSK-----EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 78 (358)
.+||+|.|+||.+|+.+++.|++.|++ ....++.. ...+.-..++.++.+...+|+++-+....
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g~~---~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~-------- 75 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYGTK---MVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAP-------- 75 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGG--------
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCe---EEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHH--------
Confidence 468999999999999999999987653 00011100 01111123455566533599999663322
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
.+..+++.|.++|++.+|-+++
T Consensus 76 -----------~~~~~~~ea~~~Gi~~iVi~t~ 97 (288)
T 2nu8_A 76 -----------FCKDSILEAIDAGIKLIITITE 97 (288)
T ss_dssp -----------GHHHHHHHHHHTTCSEEEECCC
T ss_pred -----------HHHHHHHHHHHCCCCEEEEECC
Confidence 2334778888899876565444
|
| >3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O | Back alignment and structure |
|---|
Probab=93.67 E-value=0.21 Score=46.49 Aligned_cols=25 Identities=20% Similarity=0.412 Sum_probs=21.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
|| |+||.|.|+ |.+|+.+++.|.++
T Consensus 1 mm-~ikVgI~G~-GrIGr~l~R~l~~~ 25 (337)
T 3e5r_O 1 MG-KIKIGINGF-GRIGRLVARVALQS 25 (337)
T ss_dssp -C-CEEEEEECC-SHHHHHHHHHHHTC
T ss_pred CC-ceEEEEECc-CHHHHHHHHHHhCC
Confidence 54 359999999 99999999999875
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=93.65 E-value=0.62 Score=41.26 Aligned_cols=24 Identities=17% Similarity=0.217 Sum_probs=21.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|+|+ |-+|+++++.|...|.
T Consensus 29 ~~VlvvG~-GglG~~va~~La~~Gv 52 (251)
T 1zud_1 29 SQVLIIGL-GGLGTPAALYLAGAGV 52 (251)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTC
T ss_pred CcEEEEcc-CHHHHHHHHHHHHcCC
Confidence 58999997 5599999999999986
|
| >1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1 | Back alignment and structure |
|---|
Probab=93.53 E-value=0.17 Score=47.08 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=21.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
|| |+||.|.|. |.+|+.+++.|.++.
T Consensus 1 mM-~ikVgI~G~-G~iGr~~~R~l~~~~ 26 (335)
T 1u8f_O 1 MG-KVKVGVNGF-GRIGRLVTRAAFNSG 26 (335)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHHHC
T ss_pred CC-ceEEEEEcc-CHHHHHHHHHHHcCC
Confidence 55 469999996 999999999998753
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=93.24 E-value=0.15 Score=41.01 Aligned_cols=81 Identities=17% Similarity=0.143 Sum_probs=48.9
Q ss_pred CCEEEEEcCC---ChhHHHHHHHHHHcccc----CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccc
Q psy7590 4 EKIILVTGGT---GLVGKAIEKIVKEEEKR----DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN 76 (358)
Q Consensus 4 ~~~VlItGat---G~lG~~l~~~L~~~g~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 76 (358)
.++|.|+|+| |.+|..+++.|++.|++ ++.. ..+ . .+.-..++.++.+ .+|+++-+...
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~-~~i---~-G~~~~~s~~el~~--~vDlvii~vp~------- 79 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY-DEI---E-GLKCYRSVRELPK--DVDVIVFVVPP------- 79 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC-SEE---T-TEECBSSGGGSCT--TCCEEEECSCH-------
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC-CeE---C-CeeecCCHHHhCC--CCCEEEEEeCH-------
Confidence 4689999997 89999999999999874 1111 111 0 1111223333334 48988854221
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEee
Q psy7590 77 MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110 (358)
Q Consensus 77 ~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~S 110 (358)
.....+++.|.+.|++.++..+
T Consensus 80 ------------~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 80 ------------KVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp ------------HHHHHHHHHHHHTTCCEEEECT
T ss_pred ------------HHHHHHHHHHHHcCCCEEEEcC
Confidence 1333466667778888766544
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=93.23 E-value=0.16 Score=47.77 Aligned_cols=59 Identities=19% Similarity=0.111 Sum_probs=43.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CC-CC--cee-eecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DD-ET--WIF-VSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~-~~--~~~-~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
|+||+|+|+ |.+|+.+++.|.+.|++ .. .. ... -..+..|..|.+.+.++++ ++|+|+-
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~--~~d~v~~ 68 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLVK--GSDVTTY 68 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECCTTCHHHHHHHHH--TCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhCceEEECCCCCHHHHHHHHh--cCCEEEe
Confidence 468999996 89999999999999984 11 11 111 1234578889999988885 6999884
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=93.18 E-value=0.13 Score=48.48 Aligned_cols=61 Identities=11% Similarity=0.139 Sum_probs=44.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCCCcee----eecccccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDETWIF----VSSKEADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~~~~----~~~~~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
+|+|||+|+ |.+|..+++.+.+.|++ ....... -..+..|..|.+.+.++++..++|+|+-
T Consensus 11 ~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~d~~~~~~~~d~~~l~~~~~~~~~d~v~~ 80 (391)
T 1kjq_A 11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVP 80 (391)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchhhhccceEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 469999986 89999999999999984 1111100 1233567788999998887778999985
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=93.01 E-value=0.052 Score=50.97 Aligned_cols=24 Identities=25% Similarity=0.404 Sum_probs=21.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g 28 (358)
+||.|.||+|++|+.+++.|.+++
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p 32 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHP 32 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCS
T ss_pred ceEEEECcCCHHHHHHHHHHhcCC
Confidence 589999999999999999998764
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=92.99 E-value=0.11 Score=47.73 Aligned_cols=91 Identities=13% Similarity=0.135 Sum_probs=58.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCC------------CHH----------HHHHHHhccCCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLS------------NLE----------STQQLFSKYKPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~------------~~~----------~~~~~~~~~~~d~ 62 (358)
|||.|+|| |.+|..++..|+..+.- . +.+-.|+. +.. .-.++++ ++|+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~--~-----el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~--~aD~ 70 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVA--R-----EVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLE--GARA 70 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCC--S-----EEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGT--TEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC--C-----EEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhC--CCCE
Confidence 48999998 99999999999887631 0 01111111 000 0022345 5899
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEE
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVS 108 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~ 108 (358)
||.+++... ..-..-......|+...+.+.+.+.+.+.+ .+|.
T Consensus 71 Vii~ag~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv 114 (310)
T 2xxj_A 71 VVLAAGVAQ---RPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV 114 (310)
T ss_dssp EEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEECCCCCC---CCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEE
Confidence 999988643 112234567889999999999999988755 3443
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=92.87 E-value=0.14 Score=46.54 Aligned_cols=52 Identities=15% Similarity=0.263 Sum_probs=37.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
++|.|+||.|.+|..++..|.+.|+ ... ..|.....+..+++. ++|+||-+.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~----~V~-----~~~~~~~~~~~~~~~--~aDvVilav 73 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY----PIS-----ILDREDWAVAESILA--NADVVIVSV 73 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC----CEE-----EECTTCGGGHHHHHT--TCSEEEECS
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC----eEE-----EEECCcccCHHHHhc--CCCEEEEeC
Confidence 4899999999999999999998875 111 223333335566676 599999663
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=92.54 E-value=0.097 Score=50.95 Aligned_cols=60 Identities=13% Similarity=0.205 Sum_probs=45.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC------CceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------TWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
+.|||+|+| .|.+|++|++.|.++|+. +.. ....+..+.||.++++.+.++=-+ ++|.+|
T Consensus 2 ~~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~-~ad~~i 73 (461)
T 4g65_A 2 NAMKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQ-DADMLV 73 (461)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTT-TCSEEE
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCC-cCCEEE
Confidence 357999999 599999999999999884 110 111345568999999999888543 699888
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=92.48 E-value=0.33 Score=44.20 Aligned_cols=84 Identities=12% Similarity=0.124 Sum_probs=52.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCCCCceeeeccc-----ccCCCHHHHHHHHhccCCcEEEEcccccCCccccccch
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKE-----ADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHN 80 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~-----~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~ 80 (358)
+|+|.|+||..|+.+++.|++.|++ ....++... ..+.-..++.++.+...+|++|-+...
T Consensus 15 ~v~V~Gasg~~G~~~~~~l~~~g~~---~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~----------- 80 (294)
T 2yv1_A 15 KAIVQGITGRQGSFHTKKMLECGTK---IVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPA----------- 80 (294)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCC---EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCH-----------
T ss_pred EEEEECCCCCHHHHHHHHHHhCCCe---EEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCH-----------
Confidence 6888899999999999999988763 111111100 111222345556653359999866322
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 81 LDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 81 ~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
..+..+++.|.++|++.+|.+++
T Consensus 81 --------~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 81 --------PFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp --------HHHHHHHHHHHHTTCSEEEECCS
T ss_pred --------HHHHHHHHHHHHCCCCEEEEECC
Confidence 13445788888999986665554
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=92.41 E-value=0.18 Score=40.69 Aligned_cols=81 Identities=19% Similarity=0.069 Sum_probs=48.6
Q ss_pred CCEEEEEcCC---ChhHHHHHHHHHHccccCCCCceeeeccc---ccCCCHHHHHHHHhccCCcEEEEcccccCCccccc
Q psy7590 4 EKIILVTGGT---GLVGKAIEKIVKEEEKRDDETWIFVSSKE---ADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNM 77 (358)
Q Consensus 4 ~~~VlItGat---G~lG~~l~~~L~~~g~~~~~~~~~~~~~~---~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 77 (358)
.++|+|+|++ |.+|..+++.|++.|++ ...+.... ..+.-..++.++.+ .+|+++-+..
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~----v~~Vnp~~~~i~G~~~y~sl~~l~~--~vDlvvi~vp--------- 86 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYD----VYPVNPKYEEVLGRKCYPSVLDIPD--KIEVVDLFVK--------- 86 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE----EEEECTTCSEETTEECBSSGGGCSS--CCSEEEECSC---------
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCE----EEEECCCCCeECCeeccCCHHHcCC--CCCEEEEEeC---------
Confidence 4689999998 89999999999998874 11111000 01111122223333 4888874421
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 78 SHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 78 ~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
-.....+++.|.+.|++.+++.
T Consensus 87 ----------~~~~~~vv~~~~~~gi~~i~~~ 108 (144)
T 2d59_A 87 ----------PKLTMEYVEQAIKKGAKVVWFQ 108 (144)
T ss_dssp ----------HHHHHHHHHHHHHHTCSEEEEC
T ss_pred ----------HHHHHHHHHHHHHcCCCEEEEC
Confidence 1244557788888999876643
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=92.40 E-value=1.1 Score=41.15 Aligned_cols=91 Identities=14% Similarity=0.093 Sum_probs=57.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHH-----------------------HHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLEST-----------------------QQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~-----------------------~~~~~~~~~d 61 (358)
|||.|+|+ |.+|..++..|+..|+. .... -.|.. ++.+ .+++. ++|
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~--~~V~-----l~D~~-~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~--~aD 69 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFA--REMV-----LIDVD-KKRAEGDALDLIHGTPFTRRANIYAGDYADLK--GSD 69 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCC--SEEE-----EECSS-HHHHHHHHHHHHHHGGGSCCCEEEECCGGGGT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC--CeEE-----EEeCC-hHHHHHHHHHHHhhhhhcCCcEEEeCCHHHhC--CCC
Confidence 48999997 99999999999988751 0011 11111 1100 12333 589
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEe
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSC 109 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~ 109 (358)
+||-+++... .......+....|+...+.+++.+.+...+ .+|.+
T Consensus 70 vViiav~~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~ 115 (319)
T 1a5z_A 70 VVIVAAGVPQ---KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV 115 (319)
T ss_dssp EEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred EEEEccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence 9998877543 111234567788999999999998876544 34433
|
| >3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A* | Back alignment and structure |
|---|
Probab=92.33 E-value=0.12 Score=44.72 Aligned_cols=89 Identities=13% Similarity=0.164 Sum_probs=56.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHH--Hcccc------CCCC-ceee-ecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVK--EEEKR------DDET-WIFV-SSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~--~~g~~------~~~~-~~~~-~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
+.+|+|.|+ |.+|+.|++++. +.+++ .++. ..+- .....-+...+++.+.+++.++|.+|-+....
T Consensus 84 ~~~V~IvGa-G~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~--- 159 (212)
T 3keo_A 84 TTNVMLVGC-GNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPST--- 159 (212)
T ss_dssp CEEEEEECC-SHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGG---
T ss_pred CCEEEEECc-CHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCch---
Confidence 458999996 999999999853 23332 2222 1111 11111222457788899888899999653211
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
..+.+.+.+.++|++-+..++..
T Consensus 160 ----------------~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 160 ----------------EAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp ----------------GHHHHHHHHHHHTCCEEEECSSS
T ss_pred ----------------hHHHHHHHHHHcCCCEEEEcCCc
Confidence 12368899999999988888765
|
| >2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O* | Back alignment and structure |
|---|
Probab=92.26 E-value=0.52 Score=43.83 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=19.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKE 26 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~ 26 (358)
+||.|.|+ |.+|+.+++.|.+
T Consensus 3 ikVgI~G~-G~iGr~l~r~l~~ 23 (339)
T 2x5j_O 3 VRVAINGF-GRIGRNVVRALYE 23 (339)
T ss_dssp EEEEEECC-SHHHHHHHHHHHH
T ss_pred eEEEEECc-CHHHHHHHHHHHc
Confidence 58999998 9999999999998
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=92.25 E-value=0.092 Score=49.49 Aligned_cols=64 Identities=13% Similarity=0.181 Sum_probs=44.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceee-----ecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFV-----SSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~-----~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
.++|+|+|+ |-+|..+++.|...|.+ ...+...+ ..+.+|..+.+++.+++. ++|+||++++..
T Consensus 166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~--~~DvVi~~~g~~ 240 (369)
T 2eez_A 166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ--HADLLIGAVLVP 240 (369)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH--HCSEEEECCC--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh--CCCEEEECCCCC
Confidence 468999998 99999999999999863 11110000 012345667888888887 599999998754
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=92.24 E-value=0.1 Score=47.84 Aligned_cols=90 Identities=16% Similarity=0.166 Sum_probs=51.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeee-------ccccc------------CCCHHHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVS-------SKEAD------------LSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~-------~~~~D------------l~~~~~~~~~~~~~~~d~Vih 65 (358)
|||.|+|+ |.+|..++..|...|+-. ....++ -...| ++. .+ .++++ ++|+||-
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~--eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~~-~~a~~--~aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCS--ELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-GG-HSELA--DAQVVIL 73 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCS--EEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-EC-GGGGT--TCSEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCC--EEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-CC-HHHhC--CCCEEEE
Confidence 48999997 999999999999887610 000000 00000 000 01 12455 5899999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK 104 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~ 104 (358)
+++.... .-..-.+....|+...+.+.+.+.+...+
T Consensus 74 ~~~~~~~---~g~~r~dl~~~n~~i~~~i~~~i~~~~p~ 109 (304)
T 2v6b_A 74 TAGANQK---PGESRLDLLEKNADIFRELVPQITRAAPD 109 (304)
T ss_dssp CC---------------CHHHHHHHHHHHHHHHHHHCSS
T ss_pred cCCCCCC---CCCcHHHHHHhHHHHHHHHHHHHHHhCCC
Confidence 8875321 11233456788999999999999887644
|
| >2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=92.05 E-value=0.45 Score=43.37 Aligned_cols=85 Identities=16% Similarity=0.150 Sum_probs=52.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecc-----cccCCCHHHHHHHHhccC-CcEEEEcccccCCcccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSK-----EADLSNLESTQQLFSKYK-PTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~~~-~d~Vih~a~~~~~~~~~~~ 78 (358)
.+|+|.|+||..|+.+++.|++.|++ ....++.. ...+.-..++.++.+..+ +|++|-+....
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~g~~---~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~-------- 82 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEYGTK---VVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPAP-------- 82 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCE---EEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCGG--------
T ss_pred CEEEEECCCCCHHHHHHHHHHhCCCc---EEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCHH--------
Confidence 36888899999999999999988763 11111100 011222234556655334 89998663322
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
.+..+++.|.++|++.+|.+++
T Consensus 83 -----------~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 83 -----------FAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp -----------GHHHHHHHHHHTTCSEEEECCC
T ss_pred -----------HHHHHHHHHHHCCCCEEEEECC
Confidence 2335778888899986775554
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=92.05 E-value=0.095 Score=49.27 Aligned_cols=28 Identities=14% Similarity=0.234 Sum_probs=23.7
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||++|+|.|+| .|.+|..++..|++.|+
T Consensus 19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~ 46 (358)
T 4e21_A 19 YFQSMQIGMIG-LGRMGADMVRRLRKGGH 46 (358)
T ss_dssp ---CCEEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred hhcCCEEEEEC-chHHHHHHHHHHHhCCC
Confidence 77788999999 79999999999999987
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=91.93 E-value=0.12 Score=47.83 Aligned_cols=65 Identities=14% Similarity=0.125 Sum_probs=40.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeec----ccccCCCHH---HHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSS----KEADLSNLE---STQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~----~~~Dl~~~~---~~~~~~~~~~~d~Vih~a~ 68 (358)
.++|||+||+|-+|..+++.++..|.+ ...+...+.. ...|..+.+ .+.++....++|+||++++
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 244 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG 244 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC
Confidence 358999999999999999999988863 1111100000 113444432 3333333336899999988
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=91.85 E-value=0.078 Score=48.95 Aligned_cols=66 Identities=17% Similarity=0.248 Sum_probs=40.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeee----cccccCCCHHHHHHHHhc---cCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVS----SKEADLSNLESTQQLFSK---YKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~----~~~~Dl~~~~~~~~~~~~---~~~d~Vih~a~~ 69 (358)
.++|||+||+|-+|..+++.++..|.+ ...+...+. ....|..+.+++.+.+.. .++|+||++++.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 468999999999999999999998863 111100000 012355542333333321 268999998773
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=91.85 E-value=0.085 Score=49.05 Aligned_cols=65 Identities=12% Similarity=0.116 Sum_probs=40.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeee----cccccCCCHHHHHH----HHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVS----SKEADLSNLESTQQ----LFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~----~~~~Dl~~~~~~~~----~~~~~~~d~Vih~a~~ 69 (358)
.++|||+||+|-+|..+++.++..|.+ ...+..... ....|+.+.+++.+ +... ++|+||++++.
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~-~~D~vi~~~g~ 248 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDG-GAHGVINVSVS 248 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTS-CEEEEEECSSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCC-CCCEEEECCCc
Confidence 358999999999999999999988863 111111110 01235553333333 3333 68999998763
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=91.83 E-value=0.13 Score=49.98 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=52.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc-c---c-----CC---CC---ceeeeccc--ccCCCHHH-HHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE-K---R-----DD---ET---WIFVSSKE--ADLSNLES-TQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g-~---~-----~~---~~---~~~~~~~~--~Dl~~~~~-~~~~~~~~~~d~Vih~ 66 (358)
+||+|+| .|-+|+.++..|.++. . + .. .. ...+++.. .|-.|.++ +.+++++ .|+|||+
T Consensus 14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~--~DvVIN~ 90 (480)
T 2ph5_A 14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEE--NDFLIDV 90 (480)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCT--TCEEEEC
T ss_pred CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcC--CCEEEEC
Confidence 5899999 8999999999999865 2 1 11 11 01223333 34445544 4557764 4999986
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
+-... ...++++|.++|+ .+| +++
T Consensus 91 s~~~~-------------------~l~Im~acleaGv-~Yl--DTa 114 (480)
T 2ph5_A 91 SIGIS-------------------SLALIILCNQKGA-LYI--NAA 114 (480)
T ss_dssp CSSSC-------------------HHHHHHHHHHHTC-EEE--ESS
T ss_pred Ccccc-------------------CHHHHHHHHHcCC-CEE--ECC
Confidence 54321 2348999999997 444 554
|
| >3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A* | Back alignment and structure |
|---|
Probab=91.79 E-value=0.67 Score=43.07 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=20.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~ 27 (358)
+||.|.|+ |.+|+.+++.|.++
T Consensus 3 ikVgI~G~-G~IGr~v~r~l~~~ 24 (339)
T 3b1j_A 3 IRVAINGF-GRIGRNFLRCWFGR 24 (339)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHC
T ss_pred eEEEEECC-CHHHHHHHHHHHhc
Confidence 59999999 99999999999976
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=91.78 E-value=0.11 Score=48.22 Aligned_cols=28 Identities=29% Similarity=0.271 Sum_probs=23.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||++|||+|+|+ |.+|..++..|.+.|+
T Consensus 1 mm~~mki~iiG~-G~~G~~~a~~L~~~g~ 28 (359)
T 1bg6_A 1 MIESKTYAVLGL-GNGGHAFAAYLALKGQ 28 (359)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred CCCcCeEEEECC-CHHHHHHHHHHHhCCC
Confidence 888889999995 9999999999999886
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=91.61 E-value=0.23 Score=45.59 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=40.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeee----cccccCCCHH---HHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVS----SKEADLSNLE---STQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~----~~~~Dl~~~~---~~~~~~~~~~~d~Vih~a~ 68 (358)
.++|||+||+|-+|..+++.++..|.+ ...+..... ....|..+.+ .+.+.....++|+||++++
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g 218 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG 218 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence 468999999999999999999988863 111100000 0123444433 3333333336999999988
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=91.60 E-value=0.13 Score=47.53 Aligned_cols=82 Identities=7% Similarity=0.039 Sum_probs=55.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-----cCCCC----ceeeecccccCCCHHHHHHH-HhccCCcEEEEcccccCCcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-----RDDET----WIFVSSKEADLSNLESTQQL-FSKYKPTHVIHLAAMVGGLF 74 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-----~~~~~----~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~a~~~~~~~ 74 (358)
++|+|+|+ |.+|+.+++.|.++|+ ++..+ ...+..+.+|.++++.+.++ ++ ++|.||-+..
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~--~a~~vi~~~~------ 186 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVR--GARAVIVDLE------ 186 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCEEEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCST--TEEEEEECCS------
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCcEEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChh--hccEEEEcCC------
Confidence 47999995 9999999999998774 11111 12355678999999999887 55 5888885422
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEE
Q psy7590 75 HNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVV 107 (358)
Q Consensus 75 ~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V 107 (358)
++ +.|+. +...+++.+++ ++|
T Consensus 187 ----~d----~~n~~----~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 187 ----SD----SETIH----CILGIRKIDESVRII 208 (336)
T ss_dssp ----SH----HHHHH----HHHHHHTTCTTSEEE
T ss_pred ----cc----HHHHH----HHHHHHHHCCCCeEE
Confidence 11 23333 56677777765 444
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=91.58 E-value=0.15 Score=48.90 Aligned_cols=58 Identities=14% Similarity=0.032 Sum_probs=43.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCCCce----eeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDETWI----FVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~~~----~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
.++|+|+| +|.+|+.+++.+.+.|++ ...... .-..+..|+.|.+.+.++.+ ++|+|+
T Consensus 35 ~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~--~~D~V~ 101 (419)
T 4e4t_A 35 GAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAG--LCEAVS 101 (419)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHH--HCSEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHh--cCCEEE
Confidence 35899999 589999999999999985 111110 01234678899999999996 599998
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=91.57 E-value=0.07 Score=46.32 Aligned_cols=28 Identities=14% Similarity=0.310 Sum_probs=24.9
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||+||||.|+| +|.+|..+++.|.+.|+
T Consensus 20 ~m~mmkI~IIG-~G~mG~~la~~l~~~g~ 47 (220)
T 4huj_A 20 FQSMTTYAIIG-AGAIGSALAERFTAAQI 47 (220)
T ss_dssp GGGSCCEEEEE-CHHHHHHHHHHHHHTTC
T ss_pred hhcCCEEEEEC-CCHHHHHHHHHHHhCCC
Confidence 35578999999 89999999999999886
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=91.51 E-value=0.41 Score=45.10 Aligned_cols=58 Identities=21% Similarity=0.209 Sum_probs=42.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCC----CceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDE----TWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
+++|+|+| +|.+|+.+++.+.+.|++ ... ....-..+..+..|.+.+.++++ ++|+|.
T Consensus 14 ~k~IlIlG-~G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~--~~dvI~ 80 (389)
T 3q2o_A 14 GKTIGIIG-GGQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAE--ISDVVT 80 (389)
T ss_dssp TSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHH--TCSEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHH--hCCEee
Confidence 45899999 689999999999999984 111 11111233578889999999998 489874
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=91.48 E-value=0.73 Score=42.26 Aligned_cols=25 Identities=20% Similarity=0.356 Sum_probs=22.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHH
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKE 26 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~ 26 (358)
||+++||.|+| +|.+|..+++.|.+
T Consensus 1 M~~~irVaIIG-~G~iG~~~~~~l~~ 25 (312)
T 1nvm_B 1 MNQKLKVAIIG-SGNIGTDLMIKVLR 25 (312)
T ss_dssp CCSCEEEEEEC-CSHHHHHHHHHHHH
T ss_pred CCCCCEEEEEc-CcHHHHHHHHHHHh
Confidence 77778999999 79999999999976
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=91.26 E-value=1.1 Score=40.57 Aligned_cols=24 Identities=17% Similarity=0.271 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|+| .|-+|+.++..|...|.
T Consensus 37 ~~VlVvG-aGGlGs~va~~La~aGV 60 (292)
T 3h8v_A 37 FAVAIVG-VGGVGSVTAEMLTRCGI 60 (292)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC
T ss_pred CeEEEEC-cCHHHHHHHHHHHHcCC
Confidence 4899999 58899999999999986
|
| >1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A* | Back alignment and structure |
|---|
Probab=91.21 E-value=0.42 Score=45.23 Aligned_cols=28 Identities=21% Similarity=0.487 Sum_probs=23.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
|..|++|.|+|+||.+|+..++.+.+..
T Consensus 1 m~~m~rI~ILGsTGSIG~~~l~vi~~~p 28 (388)
T 1r0k_A 1 MSQPRTVTVLGATGSIGHSTLDLIERNL 28 (388)
T ss_dssp -CCCEEEEEETTTSHHHHHHHHHHHHTG
T ss_pred CCCceEEEEECCCeEeHHHHHHHHHhCc
Confidence 6667899999999999999999988763
|
| >1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 | Back alignment and structure |
|---|
Probab=91.15 E-value=1.1 Score=39.01 Aligned_cols=31 Identities=23% Similarity=0.095 Sum_probs=24.4
Q ss_pred chHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~ 175 (358)
+-|.++.++|.+ ..++.+.++|-+.|.|...
T Consensus 147 PSGTAl~lae~i------~~~I~i~svR~g~ivg~H~ 177 (228)
T 1vm6_A 147 PSGTAILLESAL------GKSVPIHSLRVGGVPGDHV 177 (228)
T ss_dssp SCHHHHHHHHHT------TSCCCEEEEECTTCCCEEE
T ss_pred CCHHHHHHHHhc------ccCCCEEEEECCCCcEEEE
Confidence 457788888777 2479999999999998753
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=91.11 E-value=0.25 Score=45.47 Aligned_cols=66 Identities=9% Similarity=0.081 Sum_probs=40.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeee----cccccCCCHH---HHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVS----SKEADLSNLE---STQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~----~~~~Dl~~~~---~~~~~~~~~~~d~Vih~a~~ 69 (358)
.++|||+||+|-+|..+++.++..|.+ ...+..... ....|..+.+ .+.+.....++|+||++++.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCT
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcH
Confidence 458999999999999999999998863 110110000 0123444433 33333333469999999874
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=91.03 E-value=0.52 Score=45.30 Aligned_cols=26 Identities=27% Similarity=0.403 Sum_probs=23.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
..+|||+||+|-+|...++.++..|.
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~Ga 246 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNGGG 246 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 35899999999999999999998885
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=90.93 E-value=0.07 Score=43.03 Aligned_cols=81 Identities=14% Similarity=0.017 Sum_probs=48.8
Q ss_pred CCEEEEEcCC---ChhHHHHHHHHHHccccCCCCceeeecc--cc---cCCCHHHHHHHHhccCCcEEEEcccccCCccc
Q psy7590 4 EKIILVTGGT---GLVGKAIEKIVKEEEKRDDETWIFVSSK--EA---DLSNLESTQQLFSKYKPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 4 ~~~VlItGat---G~lG~~l~~~L~~~g~~~~~~~~~~~~~--~~---Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 75 (358)
.++|+|.|+| |-+|..+++.|++.|++ ...++.. .. .+.-..++.++-+ .+|+++-+...
T Consensus 13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~----v~~vnp~~~~~~i~G~~~~~sl~el~~--~vDlavi~vp~------ 80 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYR----VLPVNPRFQGEELFGEEAVASLLDLKE--PVDILDVFRPP------ 80 (140)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCE----EEEECGGGTTSEETTEECBSSGGGCCS--CCSEEEECSCH------
T ss_pred CCEEEEECCCCCCCChHHHHHHHHHHCCCE----EEEeCCCcccCcCCCEEecCCHHHCCC--CCCEEEEEeCH------
Confidence 4689999998 89999999999999874 1111111 00 1111122333333 58888754221
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 76 NMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 76 ~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
..+..+++.|.+.|++.++..
T Consensus 81 -------------~~~~~v~~~~~~~gi~~i~~~ 101 (140)
T 1iuk_A 81 -------------SALMDHLPEVLALRPGLVWLQ 101 (140)
T ss_dssp -------------HHHTTTHHHHHHHCCSCEEEC
T ss_pred -------------HHHHHHHHHHHHcCCCEEEEc
Confidence 133346777888899877643
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=90.87 E-value=0.77 Score=42.75 Aligned_cols=24 Identities=21% Similarity=0.185 Sum_probs=21.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.| .|-+|+++++.|...|.
T Consensus 37 ~~VlivG-~GGlG~~ia~~La~~Gv 60 (346)
T 1y8q_A 37 SRVLLVG-LKGLGAEIAKNLILAGV 60 (346)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC
T ss_pred CeEEEEC-CCHHHHHHHHHHHHcCC
Confidence 5899999 57799999999999986
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=90.85 E-value=0.22 Score=40.29 Aligned_cols=27 Identities=11% Similarity=0.180 Sum_probs=24.0
Q ss_pred CCEEEEEcCC---ChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGT---GLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGat---G~lG~~l~~~L~~~g~~ 30 (358)
.++|.|+|++ |.+|..+++.|++.|++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~ 42 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYH 42 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCE
Confidence 4589999998 89999999999999874
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=90.83 E-value=0.21 Score=47.88 Aligned_cols=62 Identities=18% Similarity=0.148 Sum_probs=45.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCCCcee----eecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDETWIF----VSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~~~~----~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
+|+|||+|+ |.+|..+++.+.+.|++ ....... -..+..|..|.+.+.++++..++|+|+..
T Consensus 19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~~~d~V~~~ 89 (433)
T 2dwc_A 19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAMQVAHRSYVGNMMDKDFLWSVVEREKPDAIIPE 89 (433)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHHHHSSEEEESCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhcceEEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 358999986 89999999999999984 1111100 12345678899999988876689999854
|
| >3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri} | Back alignment and structure |
|---|
Probab=90.83 E-value=1.1 Score=35.32 Aligned_cols=88 Identities=16% Similarity=0.192 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHc-ccc------CCCC-----ceeeecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEE-EKR------DDET-----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~-g~~------~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
+.++++|.| +|-.|..+++.|.+. |++ .... ..+++++ + .+++.+.++..++|.||-+....
T Consensus 3 ~~~~vlIiG-aG~~g~~l~~~l~~~~g~~vvg~~d~~~~~~g~~i~g~pV~-g----~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 3 AKKKVLIYG-AGSAGLQLANMLRQGKEFHPIAFIDDDRKKHKTTMQGITIY-R----PKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHHSSSEEEEEEECSCGGGTTCEETTEEEE-C----GGGHHHHHHHHTCCEEEECCTTS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCcEEEEEEECCcccCCCEecCeEEE-C----HHHHHHHHHHCCCCEEEEeCCCC
Confidence 346899999 588999999999875 442 1110 0111111 1 45677777776799887432211
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
.. .....+++.|.+.+++ +..+.+..
T Consensus 77 --------~~--------~~~~~i~~~l~~~gv~-v~~vP~~~ 102 (141)
T 3nkl_A 77 --------SQ--------VQKKVIIESLAKLHVE-VLTIPNLD 102 (141)
T ss_dssp --------CH--------HHHHHHHHHHHTTTCE-EEECCCHH
T ss_pred --------CH--------HHHHHHHHHHHHcCCe-EEECCCHH
Confidence 11 1234588999999984 66565553
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=90.78 E-value=0.42 Score=44.41 Aligned_cols=26 Identities=31% Similarity=0.371 Sum_probs=23.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.++|||+||+|-+|..+++.++..|.
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga 196 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGL 196 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCC
Confidence 35899999999999999999998886
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=90.72 E-value=0.32 Score=44.54 Aligned_cols=98 Identities=16% Similarity=0.115 Sum_probs=57.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc--ccc------CCCCceeee--cc--------cccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE--EKR------DDETWIFVS--SK--------EADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~--g~~------~~~~~~~~~--~~--------~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|||.|+|+ |.+|..++..|... +++ ...+...+. .. ...+....+..+ ++ ++|+||-+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~--~aDvViia 76 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TA--NSDIVIIT 76 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GT--TCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HC--CCCEEEEe
Confidence 48999998 99999999999875 331 111111100 00 000100011112 44 58999988
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEe
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSC 109 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~ 109 (358)
++... ............|+...+.+.+.+.+...+ .+|.+
T Consensus 77 v~~p~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~ 117 (310)
T 1guz_A 77 AGLPR---KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV 117 (310)
T ss_dssp CSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred CCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 76432 111234567888999999999998887644 44443
|
| >2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A | Back alignment and structure |
|---|
Probab=90.59 E-value=1 Score=42.47 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=20.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~ 27 (358)
+||.|.|+ |.+|+.+++.|.++
T Consensus 3 ikVgInGf-GrIGr~vlR~l~~~ 24 (380)
T 2d2i_A 3 IRVAINGF-GRIGRNFLRCWFGR 24 (380)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHC
T ss_pred cEEEEECc-CHHHHHHHHHHhcC
Confidence 59999999 99999999999876
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=90.45 E-value=0.27 Score=45.61 Aligned_cols=65 Identities=18% Similarity=0.222 Sum_probs=39.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecc----cccCCCH---HHHHHHHhccCCcEEEEcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSK----EADLSNL---ESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~----~~Dl~~~---~~~~~~~~~~~~d~Vih~a~~ 69 (358)
++|+|+||+|-+|...++.++..|.+ ...+...+... ..|..+. +.+.++....++|+||++++.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~ 243 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG 243 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC
Confidence 57999999999999999999988863 11111111100 1222222 233444433479999998774
|
| >1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=90.42 E-value=0.56 Score=43.57 Aligned_cols=23 Identities=26% Similarity=0.512 Sum_probs=20.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
|+||.|.|+ |.+|+.+++.|.++
T Consensus 1 mikVgIiGa-G~iG~~l~r~L~~~ 23 (337)
T 1cf2_P 1 MKAVAINGY-GTVGKRVADAIAQQ 23 (337)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTS
T ss_pred CeEEEEEeE-CHHHHHHHHHHHcC
Confidence 358999999 99999999999875
|
| >3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
Probab=90.30 E-value=1.3 Score=34.66 Aligned_cols=28 Identities=18% Similarity=0.145 Sum_probs=24.3
Q ss_pred CCCEEEEEcCC---ChhHHHHHHHHHHcccc
Q psy7590 3 EEKIILVTGGT---GLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 3 ~~~~VlItGat---G~lG~~l~~~L~~~g~~ 30 (358)
++++|+|+||| +-.|..+.+.|++.|++
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~ 33 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSHGHE 33 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHHTCC
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHCCCe
Confidence 35789999998 67899999999999984
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=90.17 E-value=0.32 Score=44.64 Aligned_cols=17 Identities=12% Similarity=0.040 Sum_probs=16.1
Q ss_pred ChhHHHHHHHHHHcccc
Q psy7590 14 GLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 14 G~lG~~l~~~L~~~g~~ 30 (358)
|..|.+|++++++.|+.
T Consensus 65 GkmG~aiAe~~~~~Ga~ 81 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYG 81 (313)
T ss_dssp CHHHHHHHHHHHHTTCE
T ss_pred cHHHHHHHHHHHHCCCE
Confidence 99999999999999984
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=90.14 E-value=0.61 Score=43.34 Aligned_cols=60 Identities=17% Similarity=0.146 Sum_probs=39.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-----CCCCc---eee-ecccccC-CCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-----DDETW---IFV-SSKEADL-SNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~~---~~~-~~~~~Dl-~~~~~~~~~~~~~~~d~Vih~ 66 (358)
||||+|+| +|..|..++..+.+.|++ ..... ... +.+..|. .+.+.+....+ ++|+|+-.
T Consensus 1 MK~I~ilG-gg~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~aD~~~~~~~~~d~~~~~~~~~--~~D~v~~~ 70 (363)
T 4ffl_A 1 MKTICLVG-GKLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYADEFYCFDVIKEPEKLLELSK--RVDAVLPV 70 (363)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTSSEEEECCTTTCHHHHHHHHT--SSSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhCCEEEECCCCcCHHHHHHHhc--CCCEEEEC
Confidence 57999999 689999999999999985 11111 011 1223343 45666655555 69988743
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=90.14 E-value=0.23 Score=44.74 Aligned_cols=28 Identities=25% Similarity=0.230 Sum_probs=26.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||++++|.|+| .|.+|+.++..|.+.|+
T Consensus 1 Mm~~~kV~VIG-aG~mG~~iA~~la~~G~ 28 (283)
T 4e12_A 1 MTGITNVTVLG-TGVLGSQIAFQTAFHGF 28 (283)
T ss_dssp CCSCCEEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCC
Confidence 88889999998 59999999999999987
|
| >3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A* | Back alignment and structure |
|---|
Probab=90.10 E-value=0.18 Score=48.64 Aligned_cols=61 Identities=16% Similarity=0.181 Sum_probs=42.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CC--CC-ceee-ecc-------cccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DD--ET-WIFV-SSK-------EADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~--~~-~~~~-~~~-------~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
|+||||+| .|.+|..+++.+.+.|++ .. .. .... ..+ ..+..|.+.+.++++..++|+|+-
T Consensus 6 ~~kiLI~g-~g~~a~~i~~aa~~~G~~~v~v~~~~~~~~~~~~~ad~~~~i~~~~~~~~~~d~~~l~~~~~~~~~d~i~p 84 (446)
T 3ouz_A 6 IKSILIAN-RGEIALRALRTIKEMGKKAICVYSEADKDALYLKYADASICIGKARSSESYLNIPAIIAAAEIAEADAIFP 84 (446)
T ss_dssp CCEEEECC-CHHHHHHHHHHHHHTTCEEEEEEEGGGTTCTHHHHSSEEEEEECCTTTTGGGCHHHHHHHHHHHTCSEEEC
T ss_pred cceEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCcccccchHhhCCEEEEcCCCCccccccCHHHHHHHHHHhCcCEEEE
Confidence 56999999 688999999999999984 00 00 0000 111 126678888888888778998873
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=90.09 E-value=1.1 Score=45.16 Aligned_cols=24 Identities=25% Similarity=0.234 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+|+ |-+|+++++.|...|.
T Consensus 18 s~VlVVGa-GGLGsevak~La~aGV 41 (640)
T 1y8q_B 18 GRVLVVGA-GGIGCELLKNLVLTGF 41 (640)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC
T ss_pred CeEEEECc-CHHHHHHHHHHHHcCC
Confidence 48999995 8899999999999986
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=90.04 E-value=0.25 Score=44.50 Aligned_cols=26 Identities=19% Similarity=0.452 Sum_probs=23.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||+|.|+|+||.+|..+++.|.+.|+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~ 36 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAH 36 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC
Confidence 36999999999999999999999886
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=89.96 E-value=1.4 Score=40.01 Aligned_cols=96 Identities=10% Similarity=0.087 Sum_probs=53.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc--cc------CCCCceeee--c------c--cccCCCHHHHHHHHhccCCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE--KR------DDETWIFVS--S------K--EADLSNLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g--~~------~~~~~~~~~--~------~--~~Dl~~~~~~~~~~~~~~~d~Vih 65 (358)
||||.|+| +|.+|..++..|.+.| ++ ...+...+. . . ...+. ..+. +++. ++|+||-
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~d~-~~~~--~aDvVii 75 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV-INDW-AALA--DADVVIS 75 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE-ESCG-GGGT--TCSEEEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEE-eCCH-HHhC--CCCEEEE
Confidence 35899999 7999999999999887 31 000000000 0 0 00110 0111 2344 5899998
Q ss_pred cccccCCccc-cccchhhHHHHHHHHHHHHHHHHHhcCCC
Q psy7590 66 LAAMVGGLFH-NMSHNLDFFRVNMKINDNVLDTSYKQGVK 104 (358)
Q Consensus 66 ~a~~~~~~~~-~~~~~~~~~~~nv~~~~~ll~aa~~~~v~ 104 (358)
++........ ...........|+...+.+++.+.+...+
T Consensus 76 av~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~ 115 (309)
T 1hyh_A 76 TLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFH 115 (309)
T ss_dssp CCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 7765320000 11123456778888888999988876544
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=89.88 E-value=0.5 Score=43.40 Aligned_cols=66 Identities=12% Similarity=0.116 Sum_probs=39.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeec----ccccCCCH---HHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSS----KEADLSNL---ESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~----~~~Dl~~~---~~~~~~~~~~~~d~Vih~a~~ 69 (358)
..+|||+||+|-+|...++.++..|.+ ...+...... ...|..+. +.+.+.....++|+||++++.
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence 358999999999999999999988863 0111100000 01233222 334444434468999998774
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=89.84 E-value=0.45 Score=44.25 Aligned_cols=66 Identities=9% Similarity=0.106 Sum_probs=40.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeee----cccccCCCHH---HHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVS----SKEADLSNLE---STQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~----~~~~Dl~~~~---~~~~~~~~~~~d~Vih~a~~ 69 (358)
..+|||+||+|-+|..+++.++..|.+ ...+...+. ....|..+.+ .+.+.....++|+||++++.
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence 358999999999999999999988863 111110000 0123444433 33333333368999999874
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=89.76 E-value=0.43 Score=44.09 Aligned_cols=93 Identities=19% Similarity=0.167 Sum_probs=54.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-c------CCCCceee--ec--------ccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-R------DDETWIFV--SS--------KEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-~------~~~~~~~~--~~--------~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
|||.|+|| |.+|..++..|...|+ + ........ .. ....+.-..+. +++. ++|+||-++
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~--~aD~VI~av 90 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQ--NSDVVIITA 90 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGT--TCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHC--CCCEEEEcC
Confidence 58999997 9999999999998876 2 00000000 00 00000000111 2344 699999888
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK 104 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~ 104 (358)
+.... .. ..-.+....|+...+.+.+.+.+...+
T Consensus 91 g~p~k--~g-~tr~dl~~~n~~i~~~i~~~i~~~~p~ 124 (328)
T 2hjr_A 91 GVPRK--PN-MTRSDLLTVNAKIVGSVAENVGKYCPN 124 (328)
T ss_dssp SCCCC--TT-CCSGGGHHHHHHHHHHHHHHHHHHCTT
T ss_pred CCCCC--CC-CchhhHHhhhHHHHHHHHHHHHHHCCC
Confidence 75321 11 122356778888888999988887644
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=89.29 E-value=0.29 Score=44.74 Aligned_cols=27 Identities=19% Similarity=0.219 Sum_probs=24.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+||+|.|+| .|.+|..++..|.+.|+
T Consensus 19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~ 45 (310)
T 3doj_A 19 SHMMEVGFLG-LGIMGKAMSMNLLKNGF 45 (310)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred ccCCEEEEEC-ccHHHHHHHHHHHHCCC
Confidence 4578999998 79999999999999987
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=89.10 E-value=0.51 Score=43.80 Aligned_cols=25 Identities=24% Similarity=0.303 Sum_probs=23.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
++|||+||+|-+|..+++.++..|.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga 186 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGC 186 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCC
Confidence 6899999999999999999998886
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=89.07 E-value=0.62 Score=41.68 Aligned_cols=25 Identities=16% Similarity=0.129 Sum_probs=22.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.++|+|+|+ |-+|+.++..|++.|.
T Consensus 119 ~k~vlViGa-Gg~g~a~a~~L~~~G~ 143 (271)
T 1nyt_A 119 GLRILLIGA-GGASRGVLLPLLSLDC 143 (271)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC
Confidence 468999998 7799999999999985
|
| >2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A* | Back alignment and structure |
|---|
Probab=89.04 E-value=0.96 Score=41.35 Aligned_cols=86 Identities=12% Similarity=0.046 Sum_probs=52.8
Q ss_pred CCEEEEE-cCCChhHHHHHHHHHHccccCCCCceeeecc-----cccCCCHHHHHHHHhccCCcEEEEcccccCCccccc
Q psy7590 4 EKIILVT-GGTGLVGKAIEKIVKEEEKRDDETWIFVSSK-----EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNM 77 (358)
Q Consensus 4 ~~~VlIt-GatG~lG~~l~~~L~~~g~~~~~~~~~~~~~-----~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 77 (358)
.++++|+ |+||..|+.+++.|++.|++ ....++.. ...+.-..++.++.++.++|+++-+...
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G~~---~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~-------- 81 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYGTN---LVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPP-------- 81 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE---EEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCH--------
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCCCc---EEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCH--------
Confidence 3466777 99999999999999998864 11111111 0111222345555554459998855221
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 78 SHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 78 ~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
.....+++.|.+.|++.+|.+++
T Consensus 82 -----------~~~~~~~~e~i~~Gi~~iv~~t~ 104 (305)
T 2fp4_A 82 -----------PFAAAAINEAIDAEVPLVVCITE 104 (305)
T ss_dssp -----------HHHHHHHHHHHHTTCSEEEECCC
T ss_pred -----------HHHHHHHHHHHHCCCCEEEEECC
Confidence 13445778888899987665554
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=88.95 E-value=3.4 Score=37.44 Aligned_cols=90 Identities=13% Similarity=0.177 Sum_probs=56.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHH------------------------HHHHhccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLEST------------------------QQLFSKYK 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~------------------------~~~~~~~~ 59 (358)
+|||+|+|+ |.+|..++..|...|+-. ... ..|.. ++.+ .+.+. +
T Consensus 7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~--~V~-----l~d~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~ 75 (319)
T 1lld_A 7 PTKLAVIGA-GAVGSTLAFAAAQRGIAR--EIV-----LEDIA-KERVEAEVLDMQHGSSFYPTVSIDGSDDPEICR--D 75 (319)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCS--EEE-----EECSS-HHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGT--T
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCC--EEE-----EEeCC-hhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhC--C
Confidence 469999997 999999999999887510 000 11110 0000 11233 5
Q ss_pred CcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+|+||-+++... ............|+...+.+++.+.+.+.+.+|
T Consensus 76 aD~Vii~v~~~~---~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~v 120 (319)
T 1lld_A 76 ADMVVITAGPRQ---KPGQSRLELVGATVNILKAIMPNLVKVAPNAIY 120 (319)
T ss_dssp CSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCEEEECCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 899998876432 111344567888898888888888876544333
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=88.60 E-value=0.52 Score=43.15 Aligned_cols=95 Identities=16% Similarity=0.164 Sum_probs=59.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCH-------------HHHHHHHhccCCcEEEE
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNL-------------ESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~-------------~~~~~~~~~~~~d~Vih 65 (358)
||.|+|| |.+|..++..|+..+. . ....++. ...|+.+. .+. ++++ ++|+||-
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l-~--el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~--~aD~Vi~ 73 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGY-D--DLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMR--GSDIVLV 73 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTC-S--CEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGT--TCSEEEE
T ss_pred CEEEECc-CHHHHHHHHHHHhCCC-C--EEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhC--CCCEEEE
Confidence 5899998 9999999998887764 1 1111100 00111000 111 2344 6999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEee
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCL 110 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~S 110 (358)
+++...- .-..-......|+...+.+.+.+.+...+ .+|.+|
T Consensus 74 ~ag~~~k---~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (308)
T 2d4a_B 74 TAGIGRK---PGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT 116 (308)
T ss_dssp CCSCCCC---SSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred eCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 9886431 12344567889999999999999887654 455443
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=88.60 E-value=0.5 Score=43.30 Aligned_cols=66 Identities=20% Similarity=0.130 Sum_probs=39.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeec----ccccCCCH---HHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSS----KEADLSNL---ESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~----~~~Dl~~~---~~~~~~~~~~~~d~Vih~a~~ 69 (358)
..+|||+||+|-+|...++.++..|.+ ...+...... ...|..+. +.+.+.....++|+||++++.
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 358999999999999999999988863 1111100000 01233332 333444443468999998774
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=88.12 E-value=1.1 Score=40.80 Aligned_cols=85 Identities=12% Similarity=0.102 Sum_probs=53.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------------CceeeecccccCCCHHHHHHHHhcc-
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------------TWIFVSSKEADLSNLESTQQLFSKY- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------------~~~~~~~~~~Dl~~~~~~~~~~~~~- 58 (358)
|+||-++| .|..|..+++.|++.|++ +.. .....+++..-+.+.+.+++.+...
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~ 81 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDD 81 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSS
T ss_pred cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchh
Confidence 67999999 899999999999999983 000 0011223344456677776666421
Q ss_pred -------CCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 59 -------KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 59 -------~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
.=++||++.+.. ...++.+.+.+.+.|+ +||
T Consensus 82 g~~~~~~~g~iiId~sT~~-----------------p~~~~~~a~~~~~~G~-~~l 119 (300)
T 3obb_A 82 GLLAHIAPGTLVLECSTIA-----------------PTSARKIHAAARERGL-AML 119 (300)
T ss_dssp SSTTSCCC-CEEEECSCCC-----------------HHHHHHHHHHHHTTTC-EEE
T ss_pred hhhhcCCCCCEEEECCCCC-----------------HHHHHHHHHHHHHcCC-EEE
Confidence 124566665432 3355678888888887 566
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=88.03 E-value=0.26 Score=45.69 Aligned_cols=27 Identities=30% Similarity=0.434 Sum_probs=24.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
..+|||+||+|-+|..+++.++..|.+
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~ 186 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAK 186 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCE
Confidence 358999999999999999999988863
|
| >3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A* | Back alignment and structure |
|---|
Probab=88.03 E-value=1.1 Score=41.32 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=22.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
||++++|.|+| +|.+|+.+++.|.+..
T Consensus 3 mM~~irvgIiG-~G~VG~~~~~~l~~~~ 29 (331)
T 3c8m_A 3 AMKTINLSIFG-LGNVGLNLLRIIRSFN 29 (331)
T ss_dssp -CEEEEEEEEC-CSHHHHHHHHHHHHHH
T ss_pred CCcEEeEEEEe-cCHHHHHHHHHHHhCh
Confidence 56667899999 7999999999998753
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=87.99 E-value=1.3 Score=41.33 Aligned_cols=24 Identities=17% Similarity=0.347 Sum_probs=21.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|+|+ |-+|++++..|...|.
T Consensus 119 ~~VlvvG~-GglGs~va~~La~aGv 142 (353)
T 3h5n_A 119 AKVVILGC-GGIGNHVSVILATSGI 142 (353)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCC
Confidence 58999995 7799999999999886
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=87.95 E-value=0.37 Score=44.52 Aligned_cols=66 Identities=14% Similarity=0.113 Sum_probs=40.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecc----cccCCCH---HHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSK----EADLSNL---ESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~----~~Dl~~~---~~~~~~~~~~~~d~Vih~a~~ 69 (358)
..+|||+||+|-+|...++.++..|.+ ...+...+... ..|..+. +.+.+.....++|+||++++.
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 358999999999999999999888863 22222111111 1233332 333444444479999998774
|
| >3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V} | Back alignment and structure |
|---|
Probab=87.90 E-value=1.3 Score=40.68 Aligned_cols=26 Identities=12% Similarity=-0.096 Sum_probs=20.5
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
|+|+||.|+|+ |.+|...++.|.+.+
T Consensus 3 m~~~rigiiG~-G~ig~~~~~~l~~~~ 28 (329)
T 3evn_A 3 LSKVRYGVVST-AKVAPRFIEGVRLAG 28 (329)
T ss_dssp --CEEEEEEBC-CTTHHHHHHHHHHHC
T ss_pred CCceEEEEEec-hHHHHHHHHHHHhCC
Confidence 35679999995 999999999988754
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=87.89 E-value=0.24 Score=45.02 Aligned_cols=25 Identities=16% Similarity=0.146 Sum_probs=22.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+|+|.|+| .|.+|..+++.|.+.|+
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~ 39 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPG 39 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTT
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCC
Confidence 46899998 79999999999999987
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=87.87 E-value=0.43 Score=44.08 Aligned_cols=26 Identities=19% Similarity=0.265 Sum_probs=21.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
|++|++|.|+|+ |.+|...++.|.+.
T Consensus 1 M~~~~rvgiiG~-G~~g~~~~~~l~~~ 26 (344)
T 3euw_A 1 MSLTLRIALFGA-GRIGHVHAANIAAN 26 (344)
T ss_dssp --CCEEEEEECC-SHHHHHHHHHHHHC
T ss_pred CCCceEEEEECC-cHHHHHHHHHHHhC
Confidence 777789999995 99999999999875
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=87.85 E-value=0.42 Score=43.96 Aligned_cols=63 Identities=11% Similarity=0.070 Sum_probs=42.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------C---CCCce----------eeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------D---DETWI----------FVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~---~~~~~----------~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
.+++||+|+ |-+|+.++..|.+.|.. . ..+.. .+.....++.+.+++.+.+. ++|+|
T Consensus 154 gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~--~aDiI 230 (315)
T 3tnl_A 154 GKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA--ESVIF 230 (315)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc--CCCEE
Confidence 468999997 89999999999999862 2 11100 01112345666677777777 58999
Q ss_pred EEcccc
Q psy7590 64 IHLAAM 69 (358)
Q Consensus 64 ih~a~~ 69 (358)
|++...
T Consensus 231 INaTp~ 236 (315)
T 3tnl_A 231 TNATGV 236 (315)
T ss_dssp EECSST
T ss_pred EECccC
Confidence 997653
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=87.52 E-value=0.28 Score=45.83 Aligned_cols=28 Identities=18% Similarity=0.337 Sum_probs=24.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||+||+|.|+| .|.+|..++..|.+.|+
T Consensus 12 ~m~M~kI~iIG-~G~mG~~la~~L~~~G~ 39 (366)
T 1evy_A 12 LLYLNKAVVFG-SGAFGTALAMVLSKKCR 39 (366)
T ss_dssp CCCEEEEEEEC-CSHHHHHHHHHHTTTEE
T ss_pred hhccCeEEEEC-CCHHHHHHHHHHHhCCC
Confidence 56666999999 59999999999998886
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=87.42 E-value=0.38 Score=44.98 Aligned_cols=26 Identities=19% Similarity=0.321 Sum_probs=23.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|.||.|.||||++|..|++.|.++.+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~ 38 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPE 38 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTT
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCC
Confidence 56899999999999999999998754
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=87.40 E-value=0.49 Score=42.51 Aligned_cols=26 Identities=12% Similarity=0.230 Sum_probs=22.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+||+|.|+| .|.+|..++..|.+.|+
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~ 27 (295)
T 1yb4_A 2 NAMKLGFIG-LGIMGSPMAINLARAGH 27 (295)
T ss_dssp --CEEEECC-CSTTHHHHHHHHHHTTC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCC
Confidence 357999999 79999999999998876
|
| >2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ... | Back alignment and structure |
|---|
Probab=87.35 E-value=0.33 Score=46.69 Aligned_cols=61 Identities=11% Similarity=0.058 Sum_probs=42.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----C--CCCce---ee-eccc-------ccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----D--DETWI---FV-SSKE-------ADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~--~~~~~---~~-~~~~-------~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
++|||+|+ |.+|..+++.+.+.|++ . ..... .. ..+. .|+.|.+.+.++++..++|+|+-.
T Consensus 3 k~ilI~g~-g~~~~~~~~a~~~~G~~vv~v~~~~~~~~~~~~~ad~~~~~~p~~~~~~~~d~~~l~~~~~~~~~d~v~~~ 81 (449)
T 2w70_A 3 DKIVIANR-GEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPG 81 (449)
T ss_dssp SEEEECCC-HHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCCEEECC
T ss_pred ceEEEeCC-cHHHHHHHHHHHHcCCeEEEEeccccccCchhhhCCEEEEcCCCCccccccCHHHHHHHHHHcCCCEEEEC
Confidence 49999995 89999999999999984 1 11000 00 1111 277788999988877789998743
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=87.20 E-value=2.4 Score=36.71 Aligned_cols=54 Identities=11% Similarity=0.173 Sum_probs=34.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCC-----CHHHHHHHHhccCCcEEEEccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLS-----NLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
|||.|.|. |.+|+.+++.|.+.|++ ... ..|.. ..+++.+++. .++|+||-+..
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~----lv~----v~d~~~~~~~~~~~~~~l~~-~~~DvVv~~~~ 59 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFE----IAA----ILDVRGEHEKMVRGIDEFLQ-REMDVAVEAAS 59 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE----EEE----EECSSCCCTTEESSHHHHTT-SCCSEEEECSC
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCE----EEE----EEecCcchhhhcCCHHHHhc-CCCCEEEECCC
Confidence 48999996 99999999999865541 100 11111 1123455553 26999997754
|
| >1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=87.15 E-value=0.25 Score=48.17 Aligned_cols=108 Identities=12% Similarity=0.122 Sum_probs=58.8
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHc-----ccc------CCCCceee--------ecc--cccCCCHHHHHHHHhccCC
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEE-----EKR------DDETWIFV--------SSK--EADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~-----g~~------~~~~~~~~--------~~~--~~Dl~~~~~~~~~~~~~~~ 60 (358)
|+.|||.|+||.+..|..++..|+++ +.+ ...+...+ ... ...+.-..++.++++ ++
T Consensus 26 m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~--~A 103 (472)
T 1u8x_X 26 KKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFT--DV 103 (472)
T ss_dssp CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHS--SC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHc--CC
Confidence 33469999998776677788888876 221 00000000 000 011111123445666 59
Q ss_pred cEEEEcccccCCccccccc-----------------hhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 61 THVIHLAAMVGGLFHNMSH-----------------NLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~-----------------~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
|+||-+++...-......+ -......|+...+.+++.+.+...+.++...|
T Consensus 104 D~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~T 171 (472)
T 1u8x_X 104 DFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS 171 (472)
T ss_dssp SEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 9999888753210000000 02235678888999999999988765554443
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=87.10 E-value=0.54 Score=43.90 Aligned_cols=26 Identities=23% Similarity=0.279 Sum_probs=19.1
Q ss_pred CEEEEEcC-C-Chh--HHHHHHHHHHcccc
Q psy7590 5 KIILVTGG-T-GLV--GKAIEKIVKEEEKR 30 (358)
Q Consensus 5 ~~VlItGa-t-G~l--G~~l~~~L~~~g~~ 30 (358)
+||+|+|| | |.+ +.+|+++|.++|++
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~ 32 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYA 32 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCE
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCE
Confidence 37888764 5 444 56789999999984
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=86.73 E-value=0.051 Score=43.66 Aligned_cols=64 Identities=13% Similarity=0.170 Sum_probs=37.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCcee-eecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIF-VSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
.++|+|+|+ |.+|+.+++.|.+.|.+ ...+... .+....+....+++.+++. ++|+||.+.+..
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~--~~Divi~at~~~ 91 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIK--NNDVIITATSSK 91 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHH--TCSEEEECSCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhc--CCCEEEEeCCCC
Confidence 368999995 99999999999887652 0000000 0000112112233445566 589999876643
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=86.49 E-value=0.87 Score=42.22 Aligned_cols=26 Identities=19% Similarity=0.374 Sum_probs=23.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
..+|||+||+|-+|..+++.++..|.
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga 193 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGA 193 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 35899999999999999999998886
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=86.44 E-value=0.62 Score=43.10 Aligned_cols=24 Identities=29% Similarity=0.396 Sum_probs=22.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+|+ |-+|..+++.++..|.
T Consensus 169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga 192 (348)
T 2d8a_A 169 KSVLITGA-GPLGLLGIAVAKASGA 192 (348)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCC
Confidence 57999999 9999999999998886
|
| >1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A* | Back alignment and structure |
|---|
Probab=86.25 E-value=1.1 Score=44.14 Aligned_cols=24 Identities=13% Similarity=0.016 Sum_probs=21.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+|+ |-+|+.+++.|...|.
T Consensus 33 ~~VlvvG~-GGlGseiak~La~aGV 56 (531)
T 1tt5_A 33 AHVCLINA-TATGTEILKNLVLPGI 56 (531)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTC
T ss_pred CeEEEECc-CHHHHHHHHHHHHcCC
Confidence 48999995 7799999999999986
|
| >2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=86.21 E-value=3.2 Score=38.24 Aligned_cols=24 Identities=25% Similarity=0.411 Sum_probs=20.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
|+||.|.|+ |++|+.+++.|.+..
T Consensus 2 ~irVgIiG~-G~iG~~~~r~l~~~~ 25 (334)
T 2czc_A 2 KVKVGVNGY-GTIGKRVAYAVTKQD 25 (334)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTCT
T ss_pred CcEEEEEeE-hHHHHHHHHHHhcCC
Confidence 359999997 999999999998763
|
| >1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=86.19 E-value=1.9 Score=39.95 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=20.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g 28 (358)
.||.|.|+ |.+|+.+++.|.++.
T Consensus 2 ikVgIiGa-G~iG~~~~r~L~~~p 24 (340)
T 1b7g_O 2 VNVAVNGY-GTIGKRVADAIIKQP 24 (340)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCT
T ss_pred eEEEEEec-CHHHHHHHHHHHcCC
Confidence 58999999 999999999998764
|
| >3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A* | Back alignment and structure |
|---|
Probab=86.04 E-value=2.7 Score=40.26 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=40.1
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcc-ccCCCCceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEE-KRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g-~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
++|++|.|+|+||-||..-+.-+.+.. +....+...+ .+ =.+.+.+.+.+..++|.+|.
T Consensus 75 ~~mk~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aL---aA-g~Nv~lL~eQ~~ef~P~~v~ 134 (488)
T 3au8_A 75 KKPINVAIFGSTGSIGTNALNIIRECNKIENVFNVKAL---YV-NKSVNELYEQAREFLPEYLC 134 (488)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEE---EE-SSCHHHHHHHHHHHCCSEEE
T ss_pred hcceEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEE---Ec-CCCHHHHHHHHHHcCCCEEE
Confidence 457789999999999998887777632 2111222222 33 36888888888888898776
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=85.93 E-value=2.6 Score=38.12 Aligned_cols=24 Identities=29% Similarity=0.379 Sum_probs=22.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
||.++| .|.+|..+++.|++.|++
T Consensus 7 kIgfIG-LG~MG~~mA~~L~~~G~~ 30 (297)
T 4gbj_A 7 KIAFLG-LGNLGTPIAEILLEAGYE 30 (297)
T ss_dssp EEEEEC-CSTTHHHHHHHHHHTTCE
T ss_pred cEEEEe-cHHHHHHHHHHHHHCCCe
Confidence 899998 899999999999999983
|
| >3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum} | Back alignment and structure |
|---|
Probab=85.92 E-value=0.82 Score=42.61 Aligned_cols=25 Identities=8% Similarity=-0.036 Sum_probs=20.0
Q ss_pred CCCCEEEEEcCCChhHH-HHHHHHHHc
Q psy7590 2 AEEKIILVTGGTGLVGK-AIEKIVKEE 27 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~-~l~~~L~~~ 27 (358)
|++++|.|+| +|.+|. +.++.|.+.
T Consensus 3 M~~~rigiIG-~G~~g~~~~~~~l~~~ 28 (359)
T 3m2t_A 3 LSLIKVGLVG-IGAQMQENLLPSLLQM 28 (359)
T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHHTC
T ss_pred CCcceEEEEC-CCHHHHHHHHHHHHhC
Confidence 4567999999 688988 488888765
|
| >3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=85.65 E-value=1.1 Score=40.88 Aligned_cols=25 Identities=16% Similarity=0.272 Sum_probs=20.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
|+++||.|+|. |.+|..+++.|.+.
T Consensus 7 M~~irv~IIG~-G~iG~~~~~~l~~~ 31 (304)
T 3bio_A 7 DKKIRAAIVGY-GNIGRYALQALREA 31 (304)
T ss_dssp -CCEEEEEECC-SHHHHHHHHHHHHC
T ss_pred CCCCEEEEECC-hHHHHHHHHHHhcC
Confidence 34568999995 99999999999874
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=85.57 E-value=0.75 Score=42.64 Aligned_cols=26 Identities=12% Similarity=0.078 Sum_probs=22.6
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
||+++||.|+| +|.+|...++.|.+.
T Consensus 2 M~~~~~vgiiG-~G~~g~~~~~~l~~~ 27 (354)
T 3db2_A 2 MYNPVGVAAIG-LGRWAYVMADAYTKS 27 (354)
T ss_dssp CCCCEEEEEEC-CSHHHHHHHHHHTTC
T ss_pred CCCcceEEEEc-cCHHHHHHHHHHHhC
Confidence 77778999999 499999999998865
|
| >4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=85.53 E-value=2.6 Score=38.68 Aligned_cols=26 Identities=8% Similarity=0.107 Sum_probs=21.2
Q ss_pred CCCCCEEEEEcCCChhHH-HHHHHHHHc
Q psy7590 1 MAEEKIILVTGGTGLVGK-AIEKIVKEE 27 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~-~l~~~L~~~ 27 (358)
||+++||.|+| +|.+|. ..++.|.+.
T Consensus 22 ~M~~~rvgiiG-~G~ig~~~~~~~l~~~ 48 (330)
T 4ew6_A 22 SMSPINLAIVG-VGKIVRDQHLPSIAKN 48 (330)
T ss_dssp CCCCEEEEEEC-CSHHHHHTHHHHHHHC
T ss_pred cCCCceEEEEe-cCHHHHHHHHHHHHhC
Confidence 56677999999 599998 678888765
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=85.48 E-value=2.8 Score=41.43 Aligned_cols=83 Identities=12% Similarity=0.120 Sum_probs=56.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-eeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-IFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNM 77 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 77 (358)
++|+|+|+ |-+|.++++.|.+.|+. +..+. .....+.+|.+|++.+.++--+ ++|++|=+.+
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~-~ad~vi~~~~--------- 417 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGID-RASGIIVTTN--------- 417 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTT-SCSEEEECCS---------
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCcc-ccCEEEEECC---------
Confidence 57999995 99999999999999874 11111 1115678999999998877654 6999884321
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCC-EEE
Q psy7590 78 SHNLDFFRVNMKINDNVLDTSYKQGVK-KVV 107 (358)
Q Consensus 78 ~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V 107 (358)
+. +.|+. +...|++.+++ ++|
T Consensus 418 -~d----~~ni~----~~~~ak~l~~~~~ii 439 (565)
T 4gx0_A 418 -DD----STNIF----LTLACRHLHSHIRIV 439 (565)
T ss_dssp -CH----HHHHH----HHHHHHHHCSSSEEE
T ss_pred -Cc----hHHHH----HHHHHHHHCCCCEEE
Confidence 11 34554 44667777765 555
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=85.31 E-value=0.61 Score=43.63 Aligned_cols=64 Identities=17% Similarity=0.237 Sum_probs=41.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeee-----cccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVS-----SKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~-----~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
.++|+|+|+ |-+|+.+++.|+..|.+ ...+...+. .+..+..+.+++.+.+. ++|+||++++..
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA--EADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH--TCSEEEECCCCT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHc--CCCEEEECCCcC
Confidence 368999998 99999999999998852 111111110 01112234566667776 599999998753
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=85.07 E-value=0.6 Score=42.12 Aligned_cols=25 Identities=16% Similarity=0.387 Sum_probs=22.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||||+|+|+ |.+|..++..|.+.|+
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~ 27 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGN 27 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCC
Confidence 579999995 9999999999999886
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=85.04 E-value=0.43 Score=42.88 Aligned_cols=25 Identities=12% Similarity=0.122 Sum_probs=22.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||+|.|+| .|.+|..++..|.+.|+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~ 25 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGF 25 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCC
Confidence 35899998 79999999999999987
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=84.89 E-value=0.6 Score=42.05 Aligned_cols=28 Identities=25% Similarity=0.271 Sum_probs=23.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|+++|+|.|+| .|.+|..++..|.+.|+
T Consensus 1 M~~~~~i~iiG-~G~~G~~~a~~l~~~g~ 28 (301)
T 3cky_A 1 MEKSIKIGFIG-LGAMGKPMAINLLKEGV 28 (301)
T ss_dssp ---CCEEEEEC-CCTTHHHHHHHHHHTTC
T ss_pred CCCCCEEEEEC-ccHHHHHHHHHHHHCCC
Confidence 77788999999 69999999999998876
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=84.82 E-value=0.41 Score=43.62 Aligned_cols=25 Identities=24% Similarity=0.409 Sum_probs=22.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+|+|.|+| .|.+|..+++.|++.|+
T Consensus 9 ~~~IgiIG-~G~mG~~~A~~l~~~G~ 33 (306)
T 3l6d_A 9 EFDVSVIG-LGAMGTIMAQVLLKQGK 33 (306)
T ss_dssp SCSEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCC
Confidence 56899998 79999999999999987
|
| >1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A | Back alignment and structure |
|---|
Probab=84.76 E-value=1.4 Score=40.85 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=20.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
|+++++|.|+|+ |.+|+.+++.|.+.
T Consensus 3 ~~~~~~vgiiG~-G~ig~~~~~~l~~~ 28 (362)
T 1ydw_A 3 TETQIRIGVMGC-ADIARKVSRAIHLA 28 (362)
T ss_dssp ---CEEEEEESC-CTTHHHHHHHHHHC
T ss_pred CCCceEEEEECc-hHHHHHHHHHHhhC
Confidence 677789999995 99999999988875
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=84.65 E-value=4.5 Score=36.75 Aligned_cols=95 Identities=17% Similarity=0.130 Sum_probs=57.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC-------CCCceee--ecccc---cCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD-------DETWIFV--SSKEA---DLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~-------~~~~~~~--~~~~~---Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
|+||.|+|| |.+|..++..|+..+.-. ....... +.... .+.-..+. +.++ ++|+||-+++...
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~--~aD~Vi~aag~~~ 89 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASA--HSKVVIFTVNSLG 89 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGT--TCSEEEECCCC--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHC--CCCEEEEcCCCCC
Confidence 569999995 999999999999887510 0000000 00000 00000112 3345 6999999988632
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEE
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV 106 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~ 106 (358)
. -..-......|+...+.+.+.+.+...+.+
T Consensus 90 ---p-G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~ 120 (303)
T 2i6t_A 90 ---S-SQSYLDVVQSNVDMFRALVPALGHYSQHSV 120 (303)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred ---C-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence 1 134456788899999999999988764433
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.60 E-value=0.69 Score=42.10 Aligned_cols=25 Identities=28% Similarity=0.335 Sum_probs=22.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+|+|.|+| .|.+|..++..|.+.|+
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g~ 54 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMGH 54 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCC
Confidence 47899999 69999999999999886
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=84.52 E-value=1.6 Score=39.35 Aligned_cols=56 Identities=16% Similarity=0.226 Sum_probs=40.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
+.++++|+|+++.+|+.++..|+..|- .... ++ +....+.+.+. ++|+||...+..
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gA----tVtv-----~h-~~t~~L~~~~~--~ADIVI~Avg~p 214 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAGA----TVSV-----CH-IKTKDLSLYTR--QADLIIVAAGCV 214 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTC----EEEE-----EC-TTCSCHHHHHT--TCSEEEECSSCT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC----eEEE-----Ee-CCchhHHHHhh--cCCEEEECCCCC
Confidence 357999999999999999999998864 1111 11 12234667777 599999887754
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.51 E-value=0.79 Score=42.87 Aligned_cols=26 Identities=27% Similarity=0.404 Sum_probs=23.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
..+|||+||+|-+|..+++.++..|.
T Consensus 184 g~~VlV~Ga~G~vG~~~~qla~~~Ga 209 (375)
T 2vn8_A 184 GKRVLILGASGGVGTFAIQVMKAWDA 209 (375)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC
Confidence 35899999999999999999888875
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=84.41 E-value=0.67 Score=44.97 Aligned_cols=28 Identities=32% Similarity=0.371 Sum_probs=25.2
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc--cc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE--EK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~--g~ 29 (358)
|++||||.|+| .|.+|..++..|.+. |+
T Consensus 2 M~~~mkI~VIG-~G~mG~~lA~~La~~g~G~ 31 (467)
T 2q3e_A 2 MFEIKKICCIG-AGYVGGPTCSVIAHMCPEI 31 (467)
T ss_dssp CCCCCEEEEEC-CSTTHHHHHHHHHHHCTTS
T ss_pred CCCccEEEEEC-CCHHHHHHHHHHHhcCCCC
Confidence 77788999999 799999999999998 55
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=84.40 E-value=0.75 Score=44.16 Aligned_cols=24 Identities=21% Similarity=0.271 Sum_probs=22.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|||.|+| +|++|..++..|.+.|+
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~ 24 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGH 24 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCC
Confidence 4899998 79999999999999987
|
| >3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A | Back alignment and structure |
|---|
Probab=84.11 E-value=0.72 Score=40.17 Aligned_cols=64 Identities=19% Similarity=0.184 Sum_probs=35.7
Q ss_pred CCEEEEEcCCChhH-----HHHH-HHHHHccccCCCCceeeecccccCCC-HHHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVG-----KAIE-KIVKEEEKRDDETWIFVSSKEADLSN-LESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG-----~~l~-~~L~~~g~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
||+|||||=.=|-| ++.+ +.|-+. ... ........+..++.. .+.+.+++++.+||.|||++-.
T Consensus 2 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~~-i~~-~~~i~~~~lPv~y~~~~~~l~~~i~~~~Pd~VihvG~a 72 (223)
T 3ro0_A 2 EKKVLLTGFDPFGGETVNPSWEAVKRLNGA-AEG-PASIVSEQVPTVFYKSLAVLREAMKKHQPDIIICVGQA 72 (223)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHTTTC-EET-TEEEEEEEECSCTTHHHHHHHHHHHHHCCSEEEEEEEC
T ss_pred CCEEEEEeCCCCCCCCCChHHHHHHHhccc-cCC-CcEEEEEEeeeEehhHHHHHHHHHHHhCCCEEEEeccC
Confidence 56999999766665 4444 444332 111 101111122334332 3556677777789999998654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 358 | ||||
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 6e-56 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-41 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-35 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 6e-33 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 9e-27 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 3e-25 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 4e-25 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 9e-23 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-19 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 4e-19 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-17 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 2e-17 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-16 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 2e-14 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 2e-13 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 8e-11 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 3e-09 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 2e-08 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 3e-08 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 5e-08 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 1e-06 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 4e-06 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 7e-06 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 1e-05 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 2e-05 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 2e-05 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 3e-05 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 4e-05 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 6e-05 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 9e-05 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 2e-04 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 2e-04 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 2e-04 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 3e-04 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 4e-04 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 5e-04 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 6e-04 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 6e-04 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 6e-04 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 7e-04 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 8e-04 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 9e-04 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 9e-04 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 9e-04 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 0.001 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 0.001 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 0.001 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 0.002 | |
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 0.002 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 0.002 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 0.002 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 0.003 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 0.004 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 0.004 |
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 183 bits (464), Expect = 6e-56
Identities = 91/356 (25%), Positives = 156/356 (43%), Gaps = 52/356 (14%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
+ + + G G+VG AI ++ E+R D + + E +L + + F+ + V
Sbjct: 3 QRVFIAGHRGMVGSAI---RRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVY 59
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
AA VGG+ N ++ DF NM I N++ +++ V K++ S+CI+P P+
Sbjct: 60 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMA 119
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
E+ + G P+N Y+ AK L ++Y +Q+G Y SV+P N++GPHDN++ +SHV
Sbjct: 120 ESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHV 179
Query: 185 IPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244
IP + + V
Sbjct: 180 IPA--------------------------------------LLRRFHEATAQKAPDVVVW 201
Query: 245 GTGKPLRQFIYSLDLARLFIWVLREYDSVEPI-------ILSVDEKDEVTIAEVAEAIAN 297
G+G P+R+F++ D+A I V+ V ++V + TI E+A+ IA
Sbjct: 202 GSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAK 261
Query: 298 AFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAWFREN 352
+KGR+ FD + DG +K +L +L G+ + + + WF EN
Sbjct: 262 VVGYKGRVVFDASKPDGTPRKLLDVTRLHQL---GWYHEISLEAGLASTYQWFLEN 314
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (367), Expect = 2e-41
Identities = 70/360 (19%), Positives = 134/360 (37%), Gaps = 66/360 (18%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKEEEK----------RDDETWIFVSSKEADLSNLESTQQ 53
K IL+TGG G VG + +K++ + + R ++ + +L N + +
Sbjct: 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP 61
Query: 54 LFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113
L+ + + HLA+ + M + + + N N+L + + G + +++ ++
Sbjct: 62 LY--IEVDQIYHLASPASP-PNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAS-TSE 117
Query: 114 IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGP 173
++ D +P E + P Y KR+ + + AY +Q GV N FGP
Sbjct: 118 VYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGP 177
Query: 174 HDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPF 233
++ V+ I +
Sbjct: 178 RM--HMNDGRVVSNFILQALQ--------------------------------------- 196
Query: 234 CFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAE 293
G+ V G+G R F Y DL + ++ S P+ L E+ TI E A+
Sbjct: 197 ----GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS-SPVNLGNPEEH--TILEFAQ 249
Query: 294 AIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAWFREN 352
I N I F + A D K+ +K + + G+E P ++ + +++ +FR+
Sbjct: 250 LIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLM--LGWEPVVPLEEGLNKAIHYFRKE 307
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 130 bits (328), Expect = 2e-35
Identities = 64/386 (16%), Positives = 126/386 (32%), Gaps = 91/386 (23%)
Query: 7 ILVTGGTGLVGKAI---------EKIV---------KEEEKRDDETWIFVSSKEADLSNL 48
IL+TGG G +G A+ + +V E D + + AD+ +
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDS 62
Query: 49 ESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK---- 104
++F +Y+P V+HLAA + +++ F N+ +L+ + K
Sbjct: 63 AEITRIFEQYQPDAVMHLAAE-SHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGED 121
Query: 105 -----KVVSCLSTCIFPDKTTYPIDETMVHNG------PPHPSNFGYSHAKRMLDVLNKA 153
+ + ++ D E V PS+ YS +K D L +A
Sbjct: 122 KKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSP-YSASKASSDHLVRA 180
Query: 154 YYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPP 213
+ + +G+ N +GP+ +IP +I
Sbjct: 181 WRRTYGLPTIVTNCSNNYGPYHFPE----KLIPLVILNAL-------------------- 216
Query: 214 GANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSV 273
G + G G +R ++Y D AR V+ E +
Sbjct: 217 -----------------------EGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAG 253
Query: 274 EPIIL------SVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRE 327
E + + + E + A ++ +IT+ + + K+
Sbjct: 254 ETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISR 313
Query: 328 LRGPGFE-FTPFQQAVQESVAWFREN 352
G++ F+ ++++V W+ N
Sbjct: 314 EL--GWKPLETFESGIRKTVEWYLAN 337
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 123 bits (308), Expect = 6e-33
Identities = 59/369 (15%), Positives = 128/369 (34%), Gaps = 78/369 (21%)
Query: 7 ILVTGGTGLVGKA-IEKIVKEEEKRDDETWIFV------SSKEADLSNLESTQQL----- 54
+LVTGG G +G + +++ + V + A+L+ +++ +L
Sbjct: 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHG 62
Query: 55 --------FSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV 106
+ + I A + +++ F N++ +L + GV +V
Sbjct: 63 DIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRV 122
Query: 107 VSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVI 166
V + ++ + E+ P P++ Y+ +K D++ +AY++ +G+
Sbjct: 123 VHVSTNQVYGSIDSGSWTESS----PLEPNSP-YAASKAGSDLVARAYHRTYGLDVRITR 177
Query: 167 PCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226
CN +GP+ + +IP + L D
Sbjct: 178 CCNNYGPYQHPE----KLIPLFVTNLLD-------------------------------- 201
Query: 227 PFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEV 286
G + G G +R+++++ D R VL + E I + E+
Sbjct: 202 -----------GGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGE--IYHIGGGLEL 248
Query: 287 TIAEVAEAIANAFQFKG-RITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQE 344
T E+ + ++ + + L+ + K+ G+ F +
Sbjct: 249 TNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIEREL--GYRPQVSFADGLAR 306
Query: 345 SVAWFRENH 353
+V W+REN
Sbjct: 307 TVRWYRENR 315
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 106 bits (265), Expect = 9e-27
Identities = 52/373 (13%), Positives = 115/373 (30%), Gaps = 68/373 (18%)
Query: 7 ILVTGGTGLVGKAI---------------------EKIVKEEEKRDDETWIFVSSKEADL 45
+LVTGG+G +G ++ E+ + FV E D+
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFV---EGDI 59
Query: 46 SNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKK 105
N ++ + VIH A + + ++ L+++ N+ ++ VK
Sbjct: 60 RNEALMTEILHDHAIDTVIHFAGLKA-VGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118
Query: 106 VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSV 165
+ S ++ D+ P E+ P P Y +K M++ + + ++
Sbjct: 119 FIFSSSATVYGDQPKIPYVESFPTGTPQSP----YGKSKLMVEQILTDLQKAQPDWSIAL 174
Query: 166 I-PCNVFGPHD--NYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222
+ N G H + + + L+ + +D
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRD--------------------- 213
Query: 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPI-ILSVD 281
++F + D G +R +I+ +DLA + + + + + I ++
Sbjct: 214 ----SLAIFGNDYPTED-------GTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLG 262
Query: 282 EKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQ 340
++ +V A + A F A K + +
Sbjct: 263 AGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRE--LNWRVTRTLDE 320
Query: 341 AVQESVAWFRENH 353
Q++ W +
Sbjct: 321 MAQDTWHWQSRHP 333
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 101 bits (253), Expect = 3e-25
Identities = 49/376 (13%), Positives = 110/376 (29%), Gaps = 81/376 (21%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHV- 63
K+ L+TG G +G + ++ K D + + NL+ + L S+ + ++
Sbjct: 17 KVWLITGVAGFIGSNL---LETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFK 73
Query: 64 ---------------------IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG 102
+ A +G + +++ + N+ N+L +
Sbjct: 74 FIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK 133
Query: 103 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTY 162
V+ S+ + D P E P + Y+ K + ++ + + +G +
Sbjct: 134 VQSFTYAASSSTYGDHPGLPKVEDT----IGKPLSP-YAVTKYVNELYADVFSRCYGFST 188
Query: 163 TSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222
+ NVFG + N + VIP +
Sbjct: 189 IGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ---------------------------- 220
Query: 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE 282
GD+ + G G+ R F Y + + + + ++
Sbjct: 221 ---------------GDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAV 265
Query: 283 KDEVTIAEVAEAIA-----NAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FT 336
++ ++ A+ N + + A K +L G+
Sbjct: 266 GGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKL--LGYAPKY 323
Query: 337 PFQQAVQESVAWFREN 352
V ++ W+
Sbjct: 324 DVSAGVALAMPWYIMF 339
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 102 bits (254), Expect = 4e-25
Identities = 61/364 (16%), Positives = 123/364 (33%), Gaps = 60/364 (16%)
Query: 1 MAEEKIILVTGGTGLVGKAI-EKIVKEEEK-------RDDETWIFVSSKEADLSNLESTQ 52
+E I +TG G + I ++ E +++ + E L +L +
Sbjct: 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVME 71
Query: 53 QLFSKYK-PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111
+ HV +LAA +GG+ S++ N I+ N+++ + G+K+ S
Sbjct: 72 NCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASS 131
Query: 112 TCIFPDKTTYPIDETMVHNGPPHPSN--FGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
CI+P+ + P+ + K + L K Y + G+ N
Sbjct: 132 ACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHN 191
Query: 170 VFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229
++GP + R
Sbjct: 192 IYGPFGTWKGGREKAPAAFCR--------------------------------------- 212
Query: 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIA 289
T D F++ G G R F + + + + + D EP+ + DE V++
Sbjct: 213 ---KAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT-KSDFREPVNIGSDE--MVSMN 266
Query: 290 EVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAW 348
E+AE + + + K I +G + + N ++E G+ ++ ++ + W
Sbjct: 267 EMAEMVLSFEEKKLPIHHIPG-PEGVRGRNSDNNLIKEK--LGWAPNMRLKEGLRITYFW 323
Query: 349 FREN 352
+E
Sbjct: 324 IKEQ 327
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 95.5 bits (236), Expect = 9e-23
Identities = 59/380 (15%), Positives = 121/380 (31%), Gaps = 72/380 (18%)
Query: 5 KIILVTGGTGLVGKA-IEKIVKE-----------------EEKRDDETWIFVSSKEADLS 46
KI+LVTGG G +G + ++++ + + T + E DL
Sbjct: 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61
Query: 47 NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV 106
+ + +++F +YK VIH A + + + L ++ N+ +L+ + V K
Sbjct: 62 DRKGLEKVFKEYKIDSVIHFAGLK-AVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKF 120
Query: 107 VSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ--QHGVTYTS 164
V S ++ D T +P + P P+N Y H K ++ + Y + +
Sbjct: 121 VFSSSATVYGDATRFPNMIPIPEECPLGPTNP-YGHTKYAIENILNDLYNSDKKSWKFAI 179
Query: 165 VIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLD 224
+ N G H + + G+D +
Sbjct: 180 LRYFNPIGAHPSGLI-------------------GEDPLGIPNN---------------- 204
Query: 225 LIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEK- 283
L+P+ + ++ + G R D + +++ + + +
Sbjct: 205 LLPY-MAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEG 263
Query: 284 ----------DEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGF 333
T+ EV A A A L TA + + +
Sbjct: 264 LCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKRE--LKW 321
Query: 334 E-FTPFQQAVQESVAWFREN 352
+ + + ++ W EN
Sbjct: 322 QTELQVEDSCKDLWKWTTEN 341
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 85.0 bits (209), Expect = 4e-19
Identities = 61/370 (16%), Positives = 115/370 (31%), Gaps = 71/370 (19%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLES-------------- 50
K I+VTGG G +G V T + + + +NLE+
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIA 62
Query: 51 -TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+ + I A ++++ F N +L+ + K ++
Sbjct: 63 DAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVS 122
Query: 110 LSTCI--FPDKTTYPIDETMVHNG-----PPHPSNFGYSHAKRMLDVLNKAYYQQHGVTY 162
P + P +PS+ YS K D++ KA+ + GV
Sbjct: 123 TDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP-YSSTKAASDLIVKAWVRSFGVKA 181
Query: 163 TSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDK 222
T N +GP+ + I
Sbjct: 182 TISNCSNNYGPYQHIEKFIPRQI------------------------------------- 204
Query: 223 LDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE 282
G + K+ G GK +R +I++ D + +W + + L +
Sbjct: 205 ----------TNILAGIKPKLYGEGKNVRDWIHTNDHST-GVWAILTKGRMGETYLIGAD 253
Query: 283 KDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFTPFQQAV 342
++ + + Q K T+ A L+ KLR+ G +FT F + +
Sbjct: 254 GEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDELGWTPQFTDFSEGL 313
Query: 343 QESVAWFREN 352
+E++ W+ +N
Sbjct: 314 EETIQWYTDN 323
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 85.2 bits (210), Expect = 4e-19
Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 31/213 (14%)
Query: 5 KIILVTGGTGLVGKAI----------------------EKIVKEEEKRDDETWIFVSSKE 42
K+ L+TG TG G + + V +
Sbjct: 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61
Query: 43 ADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG 102
DLS+ + ++ + +P V +L AM + + V+ +L+ G
Sbjct: 62 GDLSDTSNLTRILREVQPDEVYNLGAMSH-VAVSFESPEYTADVDAMGTLRLLEAIRFLG 120
Query: 103 VKK---VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHG 159
++K ++ ++ P ET P +P + Y+ AK + Y + +G
Sbjct: 121 LEKKTRFYQASTSELYGLVQEIPQKETT----PFYPRSP-YAVAKLYAYWITVNYRESYG 175
Query: 160 VTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKL 192
+ + I N P + + +
Sbjct: 176 MYACNGILFNHESPRRGETFVTRKITRAIANIA 208
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 80.6 bits (197), Expect = 2e-17
Identities = 55/399 (13%), Positives = 127/399 (31%), Gaps = 77/399 (19%)
Query: 7 ILVTGGTGLVG-----------------------------------KAIEKIVKEEEKRD 31
+LV GG G +G K+ + + +
Sbjct: 5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKP 64
Query: 32 DETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKIN 91
+ + + D+ N + +F+++ P + + ++ L ++ N+
Sbjct: 65 PWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGI 124
Query: 92 DNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN--FGYSHAKRMLDV 149
+L K++ S IF + T + + Y +K + +
Sbjct: 125 LRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAER 184
Query: 150 LNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE-----SSHVIPGLIRKLYDTIEKGKDQSV 204
+ + + +G+ + N G H++ ++ S+H+IP ++ ++ I + ++
Sbjct: 185 MIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTI 244
Query: 205 FESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFI 264
E D +F + D G +R +++ DLA I
Sbjct: 245 HE--------------DASTDKRMPIFGTDYPTPD-------GTCVRDYVHVCDLASAHI 283
Query: 265 WVLREYDSVEPI-------ILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLK 317
L + + P + ++ ++ EV E +
Sbjct: 284 LALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAY 343
Query: 318 KTASNRKLRELRGPGFEFTP---FQQAVQESVAWFRENH 353
A++ K RE+ G + P +A+ E+ F+ H
Sbjct: 344 LVAASDKAREVLG----WKPKYDTLEAIMETSWKFQRTH 378
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.1 bits (196), Expect = 2e-17
Identities = 63/377 (16%), Positives = 124/377 (32%), Gaps = 68/377 (18%)
Query: 5 KIILVTGGTGLVGKAI------------------------EKIVKEEEKRDDETWIFVSS 40
+ +LVTGG G +G + + + + T V
Sbjct: 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEF 62
Query: 41 KEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYK 100
+E D+ + + Q+LF KY VIH A + + ++ LD++RVN+ +L+
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAG-LKAVGESVQKPLDYYRVNLTGTIQLLEIMKA 121
Query: 101 QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ-QHG 159
GVK +V S ++ + P+DE G +P Y +K ++ + + Q
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNP----YGKSKFFIEEMIRDLCQADKT 177
Query: 160 VTYTSVIPCNVFGPHD--NYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANS 217
+ N G H + + L+ + ++
Sbjct: 178 WNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRRE---------------- 221
Query: 218 FGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPI- 276
G D G +R +I+ +DLA+ I LR+
Sbjct: 222 --------------ALNVFGNDY--DTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCR 265
Query: 277 ILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-F 335
I ++ ++ ++ +A+ A K A+ +E G+
Sbjct: 266 IYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEE--LGWTAA 323
Query: 336 TPFQQAVQESVAWFREN 352
+ ++ W ++N
Sbjct: 324 LGLDRMCEDLWRWQKQN 340
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.3 bits (189), Expect = 2e-16
Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 36/212 (16%)
Query: 5 KIILVTGGTGLVG--------------------------KAIEKIVKEEEKRDDETWIFV 38
+ L+TG TG G IE + K + +
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61
Query: 39 SSKEADLSNLESTQQLFSKYKPTHVIHL--AAMVGGLFHNMSHNLDFFRVNMKINDNVLD 96
DL++ ++ ++ KPT + +L + V F + D V + +
Sbjct: 62 ---YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVK 118
Query: 97 TSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQ 156
T K ++ ++ P ET P +P + Y AK + + +
Sbjct: 119 TCGLINSVKFYQASTSELYGKVQEIPQKETT----PFYPRSP-YGAAKLYAYWIVVNFRE 173
Query: 157 QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGL 188
+ + + I N P N + + +
Sbjct: 174 AYNLFAVNGILFNHESPRRGANFVTRKISRSV 205
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 70.9 bits (172), Expect = 2e-14
Identities = 50/364 (13%), Positives = 103/364 (28%), Gaps = 50/364 (13%)
Query: 7 ILVTGGTGLVGKA-IEKIVKE------------EEKRDDETWIFVSSK----EADLSNLE 49
+L+TGG G +G + + + D+ W+ D+ N
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKN 62
Query: 50 STQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109
+L +KY P HL A + ++ + F +N+ N+L+ + +
Sbjct: 63 DVTRLITKYMPDSCFHL-AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIY 121
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCN 169
ST GY T + +
Sbjct: 122 SSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE-------------------STQLDFHS 162
Query: 170 VFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFS 229
+G + + I L + + A + G + K I
Sbjct: 163 PYGCSKGAA-DQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNG 221
Query: 230 LFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSV--EPIILSVDEKDEVT 287
+ F + G GK +R +++ D+ L+ L + + + ++
Sbjct: 222 I-------NKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLS 274
Query: 288 IAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESV 346
+ E+ + + + R T Q A +K+ + + VQ+
Sbjct: 275 LLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNA--IDWSPKVSAKDGVQKMY 332
Query: 347 AWFR 350
W
Sbjct: 333 DWTS 336
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 67.7 bits (164), Expect = 2e-13
Identities = 43/371 (11%), Positives = 98/371 (26%), Gaps = 77/371 (20%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKE------------EEKRDDETWIFVSSK----EADLSN 47
+ LVTG TG G + + ++++ + R + + + D+++
Sbjct: 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60
Query: 48 LESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107
S Q+ ++ A + + + + V+ ++L+ + +
Sbjct: 61 ACSVQR-AVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRF 119
Query: 108 SCLSTCIFPDKTTYPI-DETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVI 166
ST DE P Y AK + Y + G+ +S I
Sbjct: 120 YQASTSEMFGLIQAERQDENT-----PFYPRSPYGVAKLYGHWITVNYRESFGLHASSGI 174
Query: 167 PCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226
N P + V + R
Sbjct: 175 LFNHESPLRGIEFVTRKVTDAVARIKL--------------------------------- 201
Query: 227 PFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEV 286
G + LG R + ++ D +W++ + D + +++ V
Sbjct: 202 ----------GKQQELRLGNVDAKRDWGFAGDYVE-AMWLMLQQDKADDYVVATGVTTTV 250
Query: 287 TIAEVAEAIANAFQFKGRITFDTNA--ADGQLKKTASNRKLRELRGPGFEFTP---FQQA 341
++ + D + K + + G + P +
Sbjct: 251 RDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLG----WKPRTSLDEL 306
Query: 342 VQESVAWFREN 352
++ V
Sbjct: 307 IRMMVEADLRR 317
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 60.1 bits (144), Expect = 8e-11
Identities = 38/213 (17%), Positives = 64/213 (30%), Gaps = 31/213 (14%)
Query: 5 KIILVTGGTGLVGKAI-----------------------EKIVKEEEKRDDETWIFVSSK 41
KI L+TG TG G + ++I + +
Sbjct: 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN---MSHNLDFFRVNMKINDNVLDTS 98
ADL++ S ++ KP V +LAA +++ + V +
Sbjct: 62 YADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT 121
Query: 99 YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH 158
G + T P ET P HP + Y+ +K Y + +
Sbjct: 122 IDSGRTVKYYQAGSSEMFGSTPPPQSETT----PFHPRSP-YAASKCAAHWYTVNYREAY 176
Query: 159 GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRK 191
G+ + I N P N + + L R
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRI 209
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 55.2 bits (131), Expect = 3e-09
Identities = 27/172 (15%), Positives = 62/172 (36%), Gaps = 15/172 (8%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
IL+TG G +G+ I+K +K + + I ++ D++N+ + + F++ KP +V+
Sbjct: 4 ILITGANGQLGREIQKQLKGK----NVEVIPTDVQDLDITNVLAVNKFFNEKKP-NVVIN 58
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
A + +++N N+ +Y G + V + +
Sbjct: 59 CAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFD 118
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYN 178
V+ + + + Y V ++G +N+
Sbjct: 119 EVNPQSAYGKTKLEGE----------NFVKALNPKYYIVRTAWLYGDGNNFV 160
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 53.3 bits (126), Expect = 2e-08
Identities = 36/350 (10%), Positives = 87/350 (24%), Gaps = 22/350 (6%)
Query: 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
+ E ++LVTG G V +V++ + + S L + Q+ + P
Sbjct: 8 LPEGSLVLVTGANGFVASH---VVEQLLEHGYKVRGTAR----SASKLANLQKRWDAKYP 60
Query: 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT 120
+V + +++ + + + + T
Sbjct: 61 GRFETA--VVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNK------YDEVVTPAIGGTL 112
Query: 121 YPIDETMVHNGPPHPSNFGYSHAKRM-LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNL 179
+ + + + + Y + S+ D
Sbjct: 113 NALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKS 172
Query: 180 ESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGD 239
+ +L +++ F A P D +
Sbjct: 173 LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNG 232
Query: 240 EFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299
E P + ++ ++D+ L + L + V +
Sbjct: 233 EVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAG--TFDWNTVLATFRKLY 290
Query: 300 -QFKGRITFDTNAAD-GQLKKTASNRKLRELRGPGFEFTPFQQAVQESVA 347
F D + S L+ L PG + ++++++ V
Sbjct: 291 PSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPG--WRSIEESIKDLVG 338
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 52.3 bits (123), Expect = 3e-08
Identities = 28/174 (16%), Positives = 50/174 (28%), Gaps = 11/174 (6%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKE--ADLSNLESTQQLFSKYKPTHVI 64
IL+ G TG VG + + + + V SKE D SN + + K +P ++
Sbjct: 3 ILLFGKTGQVGWE---LQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIV 59
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
+ A + ++ + + + + VV + +FP P
Sbjct: 60 N--AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQ 117
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYN 178
ET P N L + + V
Sbjct: 118 ETDAT----SPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTML 167
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.1 bits (122), Expect = 5e-08
Identities = 27/182 (14%), Positives = 52/182 (28%), Gaps = 23/182 (12%)
Query: 5 KIILVTGGTGLVGKAIEK-------------IVKEEEKRDDETWIFVSSKEADLSNLEST 51
LVTG +G+ K + + + DL + ++T
Sbjct: 6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDAT 65
Query: 52 QQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111
++ P ++ A + F V + D + + +
Sbjct: 66 EKALGGIGPVDLLVNNAA-------LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 118
Query: 112 TCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVTYTSVIPC 168
I ++ + + P+ YS K + +L KA H + SV P
Sbjct: 119 DMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPT 178
Query: 169 NV 170
V
Sbjct: 179 VV 180
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 47.3 bits (110), Expect = 1e-06
Identities = 46/363 (12%), Positives = 103/363 (28%), Gaps = 45/363 (12%)
Query: 7 ILVTGGTGLVGKA-IEKIVKE---------------EEKRDDETWIFVSSKEADLSNLES 50
+L+ G G +G E++++E + + FV E D+S
Sbjct: 3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFV---EGDISIHSE 59
Query: 51 TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110
+ K + +A + + + Y++ + +
Sbjct: 60 WIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSE 119
Query: 111 STCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNV 170
+ DK ++ P + YS +K++LD + AY ++ G+ +T P N
Sbjct: 120 VYGMCSDKYFDEDHSNLIVGPVNKP-RWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNW 178
Query: 171 FGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSL 230
GP + + I +L + +G + + + L
Sbjct: 179 MGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG-GKQKRCFTDIRDGIEALYRIIE 237
Query: 231 FPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAE 290
G+ + +L + + P+ + E
Sbjct: 238 NAGNRCDGEIINI----GNPENEASIEELGEMLLASF----EKHPLRHHFPPFAGFRVVE 289
Query: 291 VAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFE-FTPFQQAVQESVAWF 349
+ + G+ D + S R +E Q+ + E++ +F
Sbjct: 290 SSS-------YYGKGYQDVE------HRKPSIRNAHRCL--DWEPKIDMQETIDETLDFF 334
Query: 350 REN 352
Sbjct: 335 LRT 337
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 45.1 bits (106), Expect = 4e-06
Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 25/191 (13%)
Query: 5 KIILVTGGTGLVGKAI------------------EKIVKEEEKRDDETWIFVSSKEADLS 46
K I+VTGG +G A V+ EK E + + + D+S
Sbjct: 10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVS 69
Query: 47 NLESTQQLF----SKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG 102
N + + + P + A V + + F +N + + +
Sbjct: 70 NTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAV 129
Query: 103 VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA---YYQQHG 159
K + ++ + + Y+ +K L K + G
Sbjct: 130 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG 189
Query: 160 VTYTSVIPCNV 170
+ ++ P V
Sbjct: 190 IRVNALSPGYV 200
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 44.4 bits (103), Expect = 7e-06
Identities = 23/188 (12%), Positives = 49/188 (26%), Gaps = 19/188 (10%)
Query: 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIF-VSSKEADLSNLESTQQLFSKYKP 60
A +LVTG +G G+ + K+ ++ D+ + + +F
Sbjct: 1 ANLPTVLVTGASGRTGQI---VYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDIT 57
Query: 61 TH------------VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108
++ L + V + + + + G K +
Sbjct: 58 DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 117
Query: 109 CLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPC 168
+ +M P HP N + + + Y G YT +
Sbjct: 118 A---AKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAG 174
Query: 169 NVFGPHDN 176
+
Sbjct: 175 GLLDKEGG 182
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (103), Expect = 1e-05
Identities = 25/184 (13%), Positives = 56/184 (30%), Gaps = 27/184 (14%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKE----------EEKRDD--ETWIFVSSKEADLSNLEST 51
+ +LVTG +G+ + + + D + DL + E+T
Sbjct: 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEAT 67
Query: 52 QQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKIND--NVLDTSYKQGVKKVVSC 109
++ P + L +N + L + + + + + ++
Sbjct: 68 ERALGSVGPVDL---------LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIV 118
Query: 110 LSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVTYTSVI 166
I ++ + + ++ Y K LD+L K H + +V
Sbjct: 119 ARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVN 178
Query: 167 PCNV 170
P V
Sbjct: 179 PTVV 182
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 43.1 bits (101), Expect = 2e-05
Identities = 25/186 (13%), Positives = 62/186 (33%), Gaps = 25/186 (13%)
Query: 5 KIILVTGGTGLVGKAI------------------EKI--VKEEEKRDDETWIFVSSKEAD 44
K +++TG + +G++ +++ K++ + +++ AD
Sbjct: 5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 64
Query: 45 LSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK 104
++ + + + +V N++ +++ +++ V
Sbjct: 65 VTEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ-AVI 122
Query: 105 KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVT 161
++ + K ++V H Y+ AK LD + QHGV
Sbjct: 123 EMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVR 182
Query: 162 YTSVIP 167
SV P
Sbjct: 183 VNSVSP 188
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 43.1 bits (101), Expect = 2e-05
Identities = 27/195 (13%), Positives = 57/195 (29%), Gaps = 30/195 (15%)
Query: 3 EEKIILVTGGTGLVGKAI---------------------EKIVKEEEKRDDETWIFVSSK 41
++K+ ++TGG G +G+ +K+ D +++
Sbjct: 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFV----- 59
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ 101
D++ E + L H L M G + + + V+D +
Sbjct: 60 HCDVTKDEDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYG 118
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQH 158
I K + ++ + Y+ K + L + ++
Sbjct: 119 AFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 178
Query: 159 GVTYTSVIPCNVFGP 173
G+ V P V P
Sbjct: 179 GIRVNCVSPYIVASP 193
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 43.3 bits (100), Expect = 3e-05
Identities = 37/208 (17%), Positives = 61/208 (29%), Gaps = 24/208 (11%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKEEEK---------------RDDETWIFVSSKEADLSNL 48
K + VTG TG G + + + S+ D+ +
Sbjct: 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ 68
Query: 49 ESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108
+ +++P V H+AA + M + + GVK VV+
Sbjct: 69 NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVN 128
Query: 109 CLSTCIFPDKTTYPIDETMVHNGPPHP-----SNFGYSHAKRMLDVLNKAYYQQHGVTYT 163
S + +K G P + N A Y QHG
Sbjct: 129 ITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVA 188
Query: 164 SVIPCNVFGPHDNYNLESSHVIPGLIRK 191
+V NV G D ++P ++R
Sbjct: 189 TVRAGNVIGGGDWAL---DRIVPDILRA 213
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 42.1 bits (99), Expect = 4e-05
Identities = 28/179 (15%), Positives = 59/179 (32%), Gaps = 22/179 (12%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKE----------EEKRDDETWIFVSSKEADLSNLESTQQ 53
K +LVTGG +G+AI + +E E ++ I + + DL + +
Sbjct: 6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVR 65
Query: 54 LFSKYKPTHVIHLAAMVGGLFHN--MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111
+ + V L +N ++ V + VL+ + + + +
Sbjct: 66 FVEE-----AAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLT-APMHLSALAA 119
Query: 112 TCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVTYTSVIP 167
+ ++ V N Y+ +K L L ++ + +V P
Sbjct: 120 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP 178
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 41.8 bits (97), Expect = 6e-05
Identities = 25/207 (12%), Positives = 51/207 (24%), Gaps = 45/207 (21%)
Query: 1 MAEEKIILVTGGTGLVGKAI--------------------EKIVKEEEKRDDETWIFVSS 40
M+ ++VTG +G + EK + + +D +
Sbjct: 1 MSP-GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLP-- 57
Query: 41 KEADLSNLESTQQLF----SKYKPTHVIHLAAMVGGLFHN---MSHNLDFFRVNMKINDN 93
++ +S + L G L N + +N
Sbjct: 58 --LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTT 115
Query: 94 --------VLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN--GPPHPSNFGYSHA 143
+L K+ LS T ++ N G Y +
Sbjct: 116 SVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMS 175
Query: 144 KRMLDVLNKAY---YQQHGVTYTSVIP 167
K +++ + + V + P
Sbjct: 176 KAAINMFGRTLAVDLKDDNVLVVNFCP 202
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.1 bits (96), Expect = 9e-05
Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 25/189 (13%)
Query: 3 EEKIILVTGGTGLVGKAI------------------EKI--VKEEEKRDDETWIFVSSKE 42
EK+ ++TG + +G+A E++ +++ + V+S
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63
Query: 43 ADLSNLESTQQLFSKYKPTH-VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ 101
AD++ ++ S + + G S + +++ D L+ + +
Sbjct: 64 ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR- 122
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQH 158
V + + K ++ P YS AK +D + QH
Sbjct: 123 SVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQH 182
Query: 159 GVTYTSVIP 167
G+ S+ P
Sbjct: 183 GIRVNSISP 191
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 40.5 bits (94), Expect = 2e-04
Identities = 28/189 (14%), Positives = 58/189 (30%), Gaps = 30/189 (15%)
Query: 5 KIILVTGGTGLVGKAI-----------------EKIVKEEEKRDDETWIFVSSKEADLSN 47
K ILVTG +G+A E+++ E + I V AD+S+
Sbjct: 6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VADVSD 62
Query: 48 LESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107
++ + +F+ + + G+ H N+ + + + +
Sbjct: 63 PKAVEAVFA-----EALEEFGRLHGVAHFAGVAHSALSWNLPLEAW--EKVLRVNLTGSF 115
Query: 108 SCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVTYTS 164
+ + T G Y+ K + L + + GV
Sbjct: 116 LVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNV 175
Query: 165 VIPCNVFGP 173
++P + P
Sbjct: 176 LLPGLIQTP 184
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 40.0 bits (93), Expect = 2e-04
Identities = 26/183 (14%), Positives = 64/183 (34%), Gaps = 20/183 (10%)
Query: 3 EEKIILVTGGTGLVGKAIEKI------------VKEEEKRDDETWIFVSSKEADLSNLES 50
++K +L+TG +G+A ++ ++E R+ + D+++ S
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPAS 63
Query: 51 TQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110
++ F++ + + G+ H D F M + D L +V+
Sbjct: 64 VERGFAE-----ALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKA 118
Query: 111 STCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA---YYQQHGVTYTSVIP 167
++ +K I T + Y+ + + L + + G+ ++ P
Sbjct: 119 ASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAP 178
Query: 168 CNV 170
+
Sbjct: 179 GFI 181
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (91), Expect = 2e-04
Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 8/134 (5%)
Query: 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKP 60
MA +KI + G TG G + + + E + V S +
Sbjct: 1 MAVKKI-AIFGATGQTGLT---TLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVL 56
Query: 61 THVIHLAAMVG--GLFHNMS--HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP 116
+ G + + ++L V + N++ GV KVV+C S +
Sbjct: 57 QAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW 116
Query: 117 DKTTYPIDETMVHN 130
D T P V +
Sbjct: 117 DPTKVPPRLQAVTD 130
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 39.7 bits (92), Expect = 3e-04
Identities = 23/197 (11%), Positives = 60/197 (30%), Gaps = 24/197 (12%)
Query: 5 KIILVTGGTGLVGKAI------------------EKIVKEEEKRDDETWIFVSSKEADLS 46
K+ +TGG +GK + + + E+ +T V + + D+
Sbjct: 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR 85
Query: 47 NLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV 106
+ + Q S+ + + R++ + D
Sbjct: 86 DPDMVQNTVSELIKVAGHPNIVIN---NAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 142
Query: 107 VSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVTYT 163
+ I K + T ++ + AK ++ ++K+ + ++G+ +
Sbjct: 143 LEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFN 202
Query: 164 SVIPCNVFGPHDNYNLE 180
+ P + L+
Sbjct: 203 VIQPGPIKTKGAFSRLD 219
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.0 bits (89), Expect = 4e-04
Identities = 20/182 (10%), Positives = 53/182 (29%), Gaps = 19/182 (10%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
K +L+ G TGL G+ ++ + +++A +++
Sbjct: 3 KRVLLAGATGLTGEH---LLDRILSEPTLAKVIAPARKA-----------LAEHPRLDNP 48
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
+ S + F + I + + +++ + + + +
Sbjct: 49 VGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLV 108
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
+ + + + +A +Q T P +FGP + + L
Sbjct: 109 VSALGADAKSSIFYNRVKGELE-----QALQEQGWPQLTIARPSLLFGPREEFRLAEILA 163
Query: 185 IP 186
P
Sbjct: 164 AP 165
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 38.9 bits (90), Expect = 5e-04
Identities = 29/183 (15%), Positives = 54/183 (29%), Gaps = 27/183 (14%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKE----------EEKRDDETWIFVSSKEADLSNLESTQQ 53
K +LV + +G+A+ + + +E EE +V DL +
Sbjct: 5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---VCDLR--KDLDL 59
Query: 54 LFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113
LF K K ++ L A + F+ + + K+V
Sbjct: 60 LFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFL--------NMIKIVRNYLPA 111
Query: 114 IFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVTYTSVIPCNV 170
+ + T P + + + A+ L K +G+T V P
Sbjct: 112 MKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWT 171
Query: 171 FGP 173
Sbjct: 172 ETE 174
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 6e-04
Identities = 30/196 (15%), Positives = 58/196 (29%), Gaps = 34/196 (17%)
Query: 5 KIILVTGGTGLVGKAI---------------------EKIVKE-EEKRDDETWIFVSSKE 42
++ +VTGG +GKAI + E + V +
Sbjct: 13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 72
Query: 43 ADLSNLESTQQLFSKYKPTH--VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYK 100
++ N E L T + L GG F + + ++ + + N+ T Y
Sbjct: 73 CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFY- 131
Query: 101 QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQ 157
+ + + I +V P A+ + L K+ +
Sbjct: 132 ------MCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWAC 185
Query: 158 HGVTYTSVIPCNVFGP 173
G+ V P ++
Sbjct: 186 SGIRINCVAPGVIYSQ 201
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 38.6 bits (89), Expect = 6e-04
Identities = 28/177 (15%), Positives = 55/177 (31%), Gaps = 17/177 (9%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKEEEK-----RDDETWIFVSSKEADLSNLESTQQLF--- 55
+ +LVTGG +G AI +++ + K R + E D+++ ++ + F
Sbjct: 8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAV 67
Query: 56 -SKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCI 114
P V+ A + M + F + N ++ + S
Sbjct: 68 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQR------ASRSMQR 121
Query: 115 FPDKTTYPIDETMVHNGPPHPSNFGYS-HAKRMLDVLNKAYYQQHGVTYTSVIPCNV 170
I G + +N+ S + + VT V P +
Sbjct: 122 NKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYI 178
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 39.2 bits (89), Expect = 6e-04
Identities = 47/388 (12%), Positives = 102/388 (26%), Gaps = 66/388 (17%)
Query: 7 ILVTGGTGLVG----------------------------------KAIEKIVKEEEKRDD 32
++V GG G G I I +
Sbjct: 4 VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63
Query: 33 ETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA--AMVGGLFHNMSHNLDFFRVNMKI 90
T + D+ + E + F ++P V+H + S + N+
Sbjct: 64 LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIG 123
Query: 91 NDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150
NVL + G + + L T I+E + + + K+
Sbjct: 124 TLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITI-THNGRTDTLPYPKQASSFY 182
Query: 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRAR 210
+ + N+ + + ++ + G++ + + ++
Sbjct: 183 HLSKVHDS---------HNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD 233
Query: 211 FPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREY 270
G + F G V G G R ++ D + +
Sbjct: 234 AVFG-----------TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANP 282
Query: 271 DSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGR----ITFDTNAADGQLKKT-ASNRKL 325
+ ++ ++ E+A + A G +T + + A + KL
Sbjct: 283 AKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKL 342
Query: 326 RELRGPGFEF-TPFQQAVQESVAWFREN 352
EL G E + + + +
Sbjct: 343 MEL---GLEPHYLSDSLLDSLLNFAVQF 367
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 38.4 bits (89), Expect = 7e-04
Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 25/190 (13%)
Query: 5 KIILVTGGTGLVGKAI------------------EKI--VKEEEKRDDETWIFVSSKEAD 44
K +++TG + +G+ E++ ++ + + V+S AD
Sbjct: 6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD 65
Query: 45 LSNLESTQQLFSKYKPTH-VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV 103
++ + Q+ + I + G + + I L + + V
Sbjct: 66 VTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ-AV 124
Query: 104 KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGV 160
++ + + K ++V P Y+ AK LD ++ + G+
Sbjct: 125 IEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 184
Query: 161 TYTSVIPCNV 170
SV P V
Sbjct: 185 RVNSVSPGMV 194
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 38.1 bits (88), Expect = 8e-04
Identities = 30/206 (14%), Positives = 68/206 (33%), Gaps = 40/206 (19%)
Query: 3 EEKIILVTGGTGLVGKAI---------------------EKIVKEEEKRDDETWIFVSSK 41
E K+ LVTG +G+ I + +V E + E+ +
Sbjct: 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA--- 65
Query: 42 EADLSNLESTQQLFS----KYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDT 97
D+S E ++ + ++K ++ A + + D + ++ N N L
Sbjct: 66 -GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFY 124
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA---Y 154
+ K++++ I I+ + + + YS +K + K+
Sbjct: 125 ITQPISKRMINNRYGRI--------INISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKE 176
Query: 155 YQQHGVTYTSVIPCNVFGPHDNYNLE 180
+T ++ P + + E
Sbjct: 177 LASRNITVNAIAPGFISSDMTDKISE 202
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 38.2 bits (87), Expect = 9e-04
Identities = 23/182 (12%), Positives = 50/182 (27%), Gaps = 14/182 (7%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
IL+ G TG +G+ + K T++ V A ++ ++ QL +K +
Sbjct: 4 SRILLIGATGYIGRH---VAKASLDLGHPTFLLVRESTASSNSEKA--QLLESFKASGAN 58
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
+ + + + V + +++ FP + +D
Sbjct: 59 IVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVD 118
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHV 184
+ + G+ YT V G ++
Sbjct: 119 NVHAVEPAKSVFEVKAKV---------RRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLT 169
Query: 185 IP 186
P
Sbjct: 170 AP 171
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 38.1 bits (88), Expect = 9e-04
Identities = 29/191 (15%), Positives = 54/191 (28%), Gaps = 27/191 (14%)
Query: 5 KIILVTGGTGLVGKAI-----------------EKIVKEEEKRDDETWIFVSSKEADLSN 47
K +LVTGGT +G AI E + E + + V+ D S
Sbjct: 9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL 68
Query: 48 LESTQQLFSKYKPTHVIHLAAMVGGLFHN--MSHNLDFFRVNMKINDNVLDTSYKQGVKK 105
++L + L +N + + + T+ +
Sbjct: 69 RPEREKLMQTV----SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLE-SAYH 123
Query: 106 VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVTY 162
+ + I + + YS K L+ L + + G+
Sbjct: 124 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 183
Query: 163 TSVIPCNVFGP 173
+V P + P
Sbjct: 184 NAVAPAVIATP 194
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 38.2 bits (87), Expect = 9e-04
Identities = 23/171 (13%), Positives = 43/171 (25%), Gaps = 10/171 (5%)
Query: 7 ILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66
+L+ GGTG +GK IV T++ + + F + +
Sbjct: 6 VLIVGGTGYIGKR---IVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEAS 62
Query: 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDET 126
L + + + V+ + + F P +
Sbjct: 63 LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF-----LPSEFG 117
Query: 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNY 177
M + H G V + + + YT V G
Sbjct: 118 MDPDIMEHALQPGSITFIDKRKV--RRAIEAASIPYTYVSSNMFAGYFAGS 166
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 37.8 bits (87), Expect = 0.001
Identities = 23/195 (11%), Positives = 55/195 (28%), Gaps = 34/195 (17%)
Query: 5 KIILVTGGTGLVGKAI----------------------EKIVKEEEKRDDETWIFVSSKE 42
K++++TG + +GK++ +++E +K E
Sbjct: 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK---- 63
Query: 43 ADLSNLESTQQLF----SKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTS 98
D++ L ++ V+ A + + +L + + N
Sbjct: 64 GDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLG 123
Query: 99 YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH 158
++ +K V + ++ S G L Y
Sbjct: 124 SREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETL----ALEYAPK 179
Query: 159 GVTYTSVIPCNVFGP 173
G+ ++ P + P
Sbjct: 180 GIRVNNIGPGAINTP 194
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.8 bits (86), Expect = 0.001
Identities = 11/175 (6%), Positives = 39/175 (22%), Gaps = 14/175 (8%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64
K + + G +G G+ ++KE ++ + + + + + T + +
Sbjct: 15 KSVFILGASGETGRV---LLKEILEQGLFSKVTL------IGRRKLTFDEEAYKNVNQEV 65
Query: 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPID 124
+ + F + + + V + +
Sbjct: 66 VDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNL 125
Query: 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNL 179
+ + + + Y+ P +
Sbjct: 126 LSSKGADKSSNFLYLQVKGEV-----EAKVEELKFDRYSVFRPGVLLCDRQESRP 175
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 37.8 bits (87), Expect = 0.001
Identities = 34/191 (17%), Positives = 55/191 (28%), Gaps = 34/191 (17%)
Query: 5 KIILVTGGTGLVGKAI----------------------EKIVKEEEKRDDETWIFVSSKE 42
K+ L TG +G+ I E++V E +K +
Sbjct: 7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQ---- 62
Query: 43 ADLSNLESTQQLFSKYKPTH--VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYK 100
AD+S LF K + + + G M D V ++ D V + + +
Sbjct: 63 ADISKPSEVVALFDKAVSHFGGLDFVMSNSG-----MEVWCDELEVTQELFDKVFNLNTR 117
Query: 101 QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS-HAKRMLDVLNKAYYQQHG 159
L C + V G P+ + + S A G
Sbjct: 118 GQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKG 177
Query: 160 VTYTSVIPCNV 170
VT + P V
Sbjct: 178 VTVNCIAPGGV 188
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 37.5 bits (86), Expect = 0.002
Identities = 28/196 (14%), Positives = 52/196 (26%), Gaps = 43/196 (21%)
Query: 5 KIILVTGGTGLVGKAI---------------------EKIVKEEEKRDDETWIFVSSKEA 43
K+ LVTG G +G A EK ++ E +V
Sbjct: 6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV----C 61
Query: 44 DLSNLESTQQLF----SKYKPTHVIHLAAMVGGLFHNMSHNL--DFFRVNMKINDNVLDT 97
D+++ E+ + + A G F + DF RV
Sbjct: 62 DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHV 121
Query: 98 SYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY--- 154
+ + GPP+ + Y +K + L +
Sbjct: 122 LKAVSRQMITQNYGRI-------VNTASMAGVKGPPNMA--AYGTSKGAIIALTETAALD 172
Query: 155 YQQHGVTYTSVIPCNV 170
+ + ++ P +
Sbjct: 173 LAPYNIRVNAISPGYM 188
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 37.3 bits (86), Expect = 0.002
Identities = 25/185 (13%), Positives = 56/185 (30%), Gaps = 27/185 (14%)
Query: 5 KIILVTGGTGLVGKAI-----------------EKIVKEEEKRDDETWIFVSSKEADLSN 47
LVTGG+ +G I +K + + + V + DLS+
Sbjct: 9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS 68
Query: 48 LESTQQLFSKYKPTHVIHLAAMVGGLFHN--MSHNLDFFRVNMKINDNVLDTSYKQGVKK 105
Q+L + L +V +N + + ++ ++ +++
Sbjct: 69 RSERQELMNTVANHFHGKLNILV----NNAGIVIYKEAKDYTVEDYSLIMSINFE-AAYH 123
Query: 106 VVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVTY 162
+ + + + + V P Y K +D L + + + +
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183
Query: 163 TSVIP 167
V P
Sbjct: 184 NGVGP 188
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.9 bits (85), Expect = 0.002
Identities = 29/202 (14%), Positives = 50/202 (24%), Gaps = 59/202 (29%)
Query: 5 KIILVTGGTGLVGKAI---------------------EKIVKEEEKRDDETWIFVSSKEA 43
+I+L+TG +G+ E+ + + + FV
Sbjct: 8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV----V 63
Query: 44 DLSNLESTQQLF----SKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDN------ 93
D SN E ++ ++ A V + ++N
Sbjct: 64 DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTT 123
Query: 94 --VLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLN 151
L K +V+ S P Y +K +
Sbjct: 124 KAFLPAMTKNNHGHIVTVASAAGH----------------VSVPFLLAYCSSKFAAVGFH 167
Query: 152 K------AYYQQHGVTYTSVIP 167
K A Q GV T + P
Sbjct: 168 KTLTDELAALQITGVKTTCLCP 189
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.8 bits (84), Expect = 0.002
Identities = 31/233 (13%), Positives = 69/233 (29%), Gaps = 46/233 (19%)
Query: 5 KIILVTGGTGLVGKAI-----------------------EKIVKEEEKRDDETWIFVSSK 41
++L+TG + +G + + + E + + +
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 42 EADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ 101
+ D+ + +S + V L G L V ++ NV +
Sbjct: 63 QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNV--VGTVR 120
Query: 102 GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA---YYQQH 158
++ + + + + V P N Y +K L+ L ++
Sbjct: 121 MLQAFLPDMK----RRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176
Query: 159 GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARF 211
GV + + GP V + K+ + E+ D++ + RF
Sbjct: 177 GVHLSLIEC----GP----------VHTAFMEKVLGSPEEVLDRTDIHTFHRF 215
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.5 bits (84), Expect = 0.003
Identities = 25/186 (13%), Positives = 58/186 (31%), Gaps = 34/186 (18%)
Query: 5 KIILVTGGTGLVGKAI-EKIVKEEEK-----RDDETWIFVSSK-------EADLSNLEST 51
K+++VTGG +G I V + +D+ + + D++ +
Sbjct: 7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDV 66
Query: 52 QQLFSK-----YKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV 106
+ L S+ + V++ A + FR +++N +
Sbjct: 67 KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELN-----------LLGT 115
Query: 107 VSCLSTCIFPDKTT--YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVT 161
+ + + + I+ + + Y K + + KA +GV
Sbjct: 116 YTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVR 175
Query: 162 YTSVIP 167
+ P
Sbjct: 176 VNCISP 181
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 36.1 bits (83), Expect = 0.004
Identities = 30/196 (15%), Positives = 67/196 (34%), Gaps = 42/196 (21%)
Query: 5 KIILVTGGTGLVGKAI---------------------EKIVKEEEKRDDETWIFVSSKEA 43
K+ ++TGGT +G AI EK K D + +
Sbjct: 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQ-----IQFFQH 61
Query: 44 DLSNLESTQQLF----SKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSY 99
D S+ + +LF + P + A + +R + +N + +
Sbjct: 62 DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121
Query: 100 KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKA-----Y 154
+ G++++ + I+ + + PS Y+ +K + +++K+
Sbjct: 122 RLGIQRMKN-------KGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 155 YQQHGVTYTSVIPCNV 170
+ + V +V P +
Sbjct: 175 LKDYDVRVNTVHPGYI 190
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 35.8 bits (82), Expect = 0.004
Identities = 26/187 (13%), Positives = 58/187 (31%), Gaps = 29/187 (15%)
Query: 5 KIILVTGGTGLVGKAIEKIVKEE--------------EKRDDETWIFVSSKEADLSNLES 50
K+ LV+GG +G + + + E + E D++
Sbjct: 7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQ 66
Query: 51 TQQLF----SKYKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKV 106
+ + + HV+ A + + + L ++ + +N GV
Sbjct: 67 WKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLT--------GVFLG 118
Query: 107 VSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAY---YQQHGVTYT 163
+ + + I+ + + + GY+ K + L K+ G+
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 178
Query: 164 SVIPCNV 170
S+ P V
Sbjct: 179 SIHPGLV 185
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 358 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 100.0 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 100.0 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.94 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.94 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.94 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.93 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.89 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.89 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.84 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.56 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.54 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.53 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.52 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.51 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.5 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.5 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.5 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.49 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.49 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.49 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.49 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.48 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.48 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.48 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.47 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.47 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.47 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.47 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.46 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.46 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.46 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.46 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.45 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.44 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.44 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.43 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.42 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.42 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.41 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.41 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.41 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.4 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.4 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.39 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.38 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.38 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.36 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.36 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.34 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.33 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.33 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.32 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.32 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.31 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.3 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.29 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.29 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.29 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.27 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.27 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.27 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.22 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.18 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.14 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.14 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.12 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.1 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.09 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.05 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.05 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.92 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.88 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.87 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.73 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 98.58 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.15 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.91 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.81 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.74 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.6 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.57 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.36 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.28 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.27 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.21 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.15 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.03 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.0 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.99 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.97 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.95 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 96.95 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.81 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 96.8 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.61 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 96.5 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.48 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.48 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.42 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.31 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 96.24 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 96.22 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.1 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 96.06 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.03 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 95.91 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.8 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.63 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 95.39 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 95.38 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 95.31 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 95.24 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.13 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.88 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.37 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 93.79 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 93.52 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 93.38 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 92.97 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 92.9 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 92.86 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 92.18 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 91.94 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 91.82 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 91.76 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 91.59 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 91.24 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 91.24 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 91.22 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 91.19 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 91.13 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 90.26 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 90.12 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 89.74 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 89.71 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 89.43 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 89.4 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 89.37 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.56 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 88.41 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 88.34 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 88.3 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 88.24 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 88.17 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 88.16 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.95 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 87.91 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 87.87 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 87.15 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 87.06 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 87.05 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 85.26 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 85.24 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 84.9 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 84.53 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 84.44 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 84.05 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 84.05 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.0 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 83.2 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 83.02 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 82.97 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 82.65 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 82.62 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 82.07 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 82.05 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 81.08 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 81.04 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=2.7e-46 Score=350.90 Aligned_cols=291 Identities=19% Similarity=0.294 Sum_probs=247.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCC-----------------------CCceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDD-----------------------ETWIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~-----------------------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
|||||||||||||++|++.|+++|+... .....+.++.+|+.+......... ++|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR--GVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT--TCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc--ccc
Confidence 5899999999999999999999987310 111235567899999998887776 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
+|+|+|+.... .....++...+++|+.++.+|+++|.+.++++|||+||.++|++....+++|++ +..|.+ .|+
T Consensus 79 ~vi~~a~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~----~~~p~~-~Y~ 152 (322)
T d1r6da_ 79 AIVHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESS----PLEPNS-PYA 152 (322)
T ss_dssp EEEECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTS----CCCCCS-HHH
T ss_pred eEEeecccccc-cccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCC----CCCCCC-HHH
Confidence 99999987542 234467788899999999999999999999999999999999998888999999 778877 799
Q ss_pred HHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCC
Q psy7590 142 HAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLD 221 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (358)
.+|..+|.+++.++++++++++++||++||||.+.+. .+++.++..+. .
T Consensus 153 ~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~----~~i~~~i~~~~----~----------------------- 201 (322)
T d1r6da_ 153 ASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE----KLIPLFVTNLL----D----------------------- 201 (322)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT----SHHHHHHHHHH----T-----------------------
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC----cHHHHHHHHHH----c-----------------------
Confidence 9999999999999999999999999999999986543 45565555443 4
Q ss_pred ccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCC
Q psy7590 222 KLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQF 301 (358)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~ 301 (358)
|+++.+++++.+.++|+|++|+|++++.++++...+ ++||++++.++++.|+++.+.+.+|.
T Consensus 202 ----------------~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~~--~~~ni~~~~~~s~~e~~~~i~~~~~~ 263 (322)
T d1r6da_ 202 ----------------GGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAG--EIYHIGGGLELTNRELTGILLDSLGA 263 (322)
T ss_dssp ----------------TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTT--CEEEECCCCEEEHHHHHHHHHHHHTC
T ss_pred ----------------CCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCCC--CeeEEeecccchhHHHHHHHHHHhCC
Confidence 889999999999999999999999999999987654 38999999999999999999999998
Q ss_pred Cccee-ecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 302 KGRIT-FDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 302 ~~~i~-~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+.... ....++.......+|++|+++.| ||+|+ +++|+|+++++|++++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--g~~p~~~~eegI~~~i~w~~~n~~ 316 (322)
T d1r6da_ 264 DWSSVRKVADRKGHDLRYSLDGGKIEREL--GYRPQVSFADGLARTVRWYRENRG 316 (322)
T ss_dssp CGGGEEEECCCTTCCCBCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHCHH
T ss_pred CccceeecCCCCCCCceeeeCHHHHHHHH--CCCCCCCHHHHHHHHHHHHHHhHH
Confidence 86543 44444555666789999999999 99976 999999999999998775
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-46 Score=351.42 Aligned_cols=295 Identities=23% Similarity=0.375 Sum_probs=243.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------CCCC----ceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------DDET----WIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGL 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~ 73 (358)
|||||||||||+|++|+++|+++|+. .... ........+|+.+.+.+..++. ++|+|||||+..+.
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~VihlAa~~~~- 78 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI--EVDQIYHLASPASP- 78 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCC--CCSEEEECCSCCSH-
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHc--CCCEEEECcccCCc-
Confidence 69999999999999999999999873 0111 1112233455555555555555 69999999997653
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccC-CCCCCCCcchHHHHHHHHHHHH
Q psy7590 74 FHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHN-GPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 74 ~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~-~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
.....++...+++|+.++.+|+++|++.++ ++||+||.+||++....+.+|+.... .+..|.+ .|+.+|.++|.+++
T Consensus 79 ~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~-~Y~~sK~~~E~~~~ 156 (312)
T d2b69a1 79 PNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA-CYDEGKRVAETMCY 156 (312)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTH-HHHHHHHHHHHHHH
T ss_pred hhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCcc-HHHHHHHHHHHHHH
Confidence 234467888999999999999999999997 79999999999988777888765422 2556655 89999999999999
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
.+++.+|++++++||++||||+.... ...+++.++..++.
T Consensus 157 ~~~~~~~~~~~~lR~~~vyGp~~~~~--~~~~i~~~i~~~~~-------------------------------------- 196 (312)
T d2b69a1 157 AYMKQEGVEVRVARIFNTFGPRMHMN--DGRVVSNFILQALQ-------------------------------------- 196 (312)
T ss_dssp HHHHHHCCCEEEEEECCEECTTCCTT--CCCHHHHHHHHHHH--------------------------------------
T ss_pred HHHHHhCCcEEEEEeeeEECCCCCCC--CccHHHHHHHHHHc--------------------------------------
Confidence 99999999999999999999987643 23566766666554
Q ss_pred cccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCC
Q psy7590 233 FCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAA 312 (358)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~ 312 (358)
|+++.+++++.+.++|+|++|++++++.++++... .+||++++..+++.++++.+++.+|.+.++.+.+.+.
T Consensus 197 -----g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~~---~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 268 (312)
T d2b69a1 197 -----GEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVS---SPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ 268 (312)
T ss_dssp -----TCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSCC---SCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCT
T ss_pred -----CCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhccC---CceEecCCcccchhhHHHHHHHHhCCCCceEECCCCC
Confidence 88999999999999999999999999999876432 3799999999999999999999999999888887777
Q ss_pred CCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 313 DGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 313 ~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
........|++|++++| ||+|. +|+++|+++++||+++.+
T Consensus 269 ~~~~~~~~d~~k~~~~l--gw~p~~~l~~~I~~~i~w~~~~~~ 309 (312)
T d2b69a1 269 DDPQKRKPDIKKAKLML--GWEPVVPLEEGLNKAIHYFRKELE 309 (312)
T ss_dssp TCCCCCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeeECHHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHh
Confidence 66777888999999999 99976 999999999999998865
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=2.1e-45 Score=350.62 Aligned_cols=297 Identities=21% Similarity=0.307 Sum_probs=241.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------------------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------------------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|||||||||||||++|+++|++.|+. .......++++.+|++|++.+.+++++.+||+||||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 48999999999999999999999873 001122456778999999999999998889999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC---------CCEEEEeeccceecCCCCCCCccccc------cCC
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG---------VKKVVSCLSTCIFPDKTTYPIDETMV------HNG 131 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~---------v~r~V~~SS~~vy~~~~~~~~~E~~~------~~~ 131 (358)
||..+. ..+..++...+++|+.++.+++++|.+.+ +++|||+||..|||.....+..|+.. ...
T Consensus 81 Aa~~~~-~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~ 159 (361)
T d1kewa_ 81 AAESHV-DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CSCCCH-HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred ccccch-hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence 997652 34556888999999999999999998864 45899999999999664333222110 111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARF 211 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (358)
+..|.+ .||.+|.++|.++..+++.++++++++||++||||.+... .+++.++..+. .
T Consensus 160 ~~~p~s-~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~----~~i~~~i~~~~----~------------- 217 (361)
T d1kewa_ 160 AYAPSS-PYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE----KLIPLVILNAL----E------------- 217 (361)
T ss_dssp CCCCCS-HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT----SHHHHHHHHHH----H-------------
T ss_pred CCCCCC-HHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC----cHHHHHHHHHH----c-------------
Confidence 566666 7999999999999999999999999999999999986542 45666665554 4
Q ss_pred CCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHH
Q psy7590 212 PPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEV 291 (358)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei 291 (358)
|+++.+++++.+.|+|+|++|+|+++..++++...+ .+||++++..+++.|+
T Consensus 218 --------------------------g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~~--~~~Ni~s~~~~s~~~~ 269 (361)
T d1kewa_ 218 --------------------------GKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAG--ETYNIGGHNEKKNLDV 269 (361)
T ss_dssp --------------------------TCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTT--CEEEECCCCEEEHHHH
T ss_pred --------------------------CCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCCCC--CeEEECCCCCcchHHH
Confidence 889999999999999999999999999999986553 3899999999999999
Q ss_pred HHHHHHHhCC--------CcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 292 AEAIANAFQF--------KGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 292 ~~~i~~~~g~--------~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
++.+.+.++. +..+...+.++........|++|++++| ||+|+ +++++|+++++||+++++
T Consensus 270 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--gw~P~~~l~e~i~~ti~w~~~n~~ 339 (361)
T d1kewa_ 270 VFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISREL--GWKPLETFESGIRKTVEWYLANTQ 339 (361)
T ss_dssp HHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBCCBCCHHHHHHH--CCCCSCCHHHHHHHHHHHHHHCHH
T ss_pred HhHhhhhcccccccccCcccceeecCCCCCCCceeeeCHHHHHHHH--CCCCCCCHHHHHHHHHHHHHHhHH
Confidence 9999987743 2334444555556667788999999999 99975 999999999999988754
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.6e-45 Score=348.08 Aligned_cols=299 Identities=16% Similarity=0.233 Sum_probs=250.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-------CC---------------CCceeeecccccCCCHHHHHHHHhccCC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-------DD---------------ETWIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~---------------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
++|+|||||||||||++|+++|++.|+. .. .....++++.+|+.|...+..... ++
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~ 92 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GV 92 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--TC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc--cc
Confidence 4579999999999999999999999973 00 011234567899999998887777 59
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
++|+|+++.... ..+..++...++.|+.|+.+|+++|.++++++|||+||.+|||.....+.+|++ +..|.+ .|
T Consensus 93 ~~v~~~~a~~~~-~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~----~~~p~~-~Y 166 (341)
T d1sb8a_ 93 DYVLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDT----IGKPLS-PY 166 (341)
T ss_dssp SEEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTC----CCCCCS-HH
T ss_pred cccccccccccc-cccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCC----CCCCCC-cc
Confidence 999999987542 234577888999999999999999999999999999999999988888999999 788877 89
Q ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGL 220 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (358)
+.+|..+|.++..++++.+++++++||++|||+...+....+.+++.++..++.
T Consensus 167 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~-------------------------- 220 (341)
T d1sb8a_ 167 AVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQ-------------------------- 220 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHH--------------------------
T ss_pred hHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHc--------------------------
Confidence 999999999999999999999999999999999987765555566666555543
Q ss_pred CccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhC
Q psy7590 221 DKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQ 300 (358)
Q Consensus 221 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g 300 (358)
|+++.+++++.+.++|+|++|+|.++..++.+.....+.+||++++..+|+.|+++.+.+.++
T Consensus 221 -----------------g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~ 283 (341)
T d1sb8a_ 221 -----------------GDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLA 283 (341)
T ss_dssp -----------------TCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHH
T ss_pred -----------------CCceEEcCCCCEEEEEEEEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhc
Confidence 889999999999999999999999999999876555566999999999999999999999997
Q ss_pred CCc-----ceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 301 FKG-----RITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 301 ~~~-----~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.+. .....+.++.+......|++|+++.| ||+|+ +++++|+++++||++..+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~L--Gw~p~~sl~~gi~~ti~wy~~~~k 341 (341)
T d1sb8a_ 284 ENGVSYHREPVYRDFREGDVRHSLADISKAAKLL--GYAPKYDVSAGVALAMPWYIMFLK 341 (341)
T ss_dssp HTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHT--CCCCCCCHHHHHHHHHHHHHHHTC
T ss_pred cccccccccccccCCCCCCcCeeeeCHHHHHHHH--CCCcCCCHHHHHHHHHHHHHHhcC
Confidence 543 22223333444455678999999999 99976 999999999999998653
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.5e-45 Score=347.10 Aligned_cols=294 Identities=18% Similarity=0.165 Sum_probs=234.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C----------------CCCceeeecccccCCCHHHHHHHHhccCCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D----------------DETWIFVSSKEADLSNLESTQQLFSKYKPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~----------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~ 62 (358)
|+|||||||||||++|+++|++.|+. . ......+.++.+|++|.+++.+++++.++|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 57999999999999999999999873 0 0112245678999999999999999888999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC---CEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV---KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|||+|+..+. ..+..++..++++|+.||.+|+++|++.++ +||||+||++|||.....+++|++ +..|.+ +
T Consensus 82 v~h~aa~~~~-~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~----~~~P~~-~ 155 (357)
T d1db3a_ 82 VYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETT----PFYPRS-P 155 (357)
T ss_dssp EEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTS----CCCCCS-H
T ss_pred EEEeeccccc-chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCC----CCCCCC-h
Confidence 9999998652 355678889999999999999999999864 479999999999987778999998 778877 8
Q ss_pred hHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
|+.+|+.+|++++.++++++++++++||+++|||...+.. .+..+...+.....
T Consensus 156 Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~-----~~~~i~~~~~~~~~--------------------- 209 (357)
T d1db3a_ 156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETF-----VTRKITRAIANIAQ--------------------- 209 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS-----HHHHHHHHHHHHHT---------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCC-----CchHHHHHHHHHHh---------------------
Confidence 9999999999999999999999999999999999765332 22233333332222
Q ss_pred CCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHh
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAF 299 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~ 299 (358)
++....+++++.+.++|+|++|+|++++.++++.. +++||+++++.+|+.|+++.+.+.+
T Consensus 210 -----------------~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~~---~~~yni~sg~~~s~~~~~~~~~~~~ 269 (357)
T d1db3a_ 210 -----------------GLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQL 269 (357)
T ss_dssp -----------------TSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTT
T ss_pred -----------------CCCceEEECCCCeeecceeechHHHHHHHHHhCCC---CCeEEECCCCceehHHHHHHHHHHh
Confidence 04445567899999999999999999999987642 2479999999999999999999999
Q ss_pred CCCcceeecC-------------------------------CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHH
Q psy7590 300 QFKGRITFDT-------------------------------NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVA 347 (358)
Q Consensus 300 g~~~~i~~~~-------------------------------~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~ 347 (358)
|....+...+ .++.......+|++|++++| ||+|+ +|+|+|+++++
T Consensus 270 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~skakk~L--Gw~P~~sl~egI~~~I~ 347 (357)
T d1db3a_ 270 GIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKL--GWKPEITLREMVSEMVA 347 (357)
T ss_dssp TEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-CCCCBCCHHHHHHH--CCCCCSCHHHHHHHHHH
T ss_pred CCccccccccccccchhhhhhcccccccccCceeEeeccccCCCccccccccCHHHHHHHH--CCCcCCCHHHHHHHHHH
Confidence 8644321100 01112233457999999999 99986 99999999998
Q ss_pred HHHHh
Q psy7590 348 WFREN 352 (358)
Q Consensus 348 ~~~~~ 352 (358)
++.+.
T Consensus 348 ~~l~~ 352 (357)
T d1db3a_ 348 NDLEA 352 (357)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76554
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.6e-44 Score=339.62 Aligned_cols=301 Identities=16% Similarity=0.237 Sum_probs=243.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------CCC---------CceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------DDE---------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------~~~---------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|||||||||||||++|++.|+++|+. ... ....+.++.+|++|.+.+.++++..+||+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 58999999999999999999999873 000 112466779999999999999998889999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRM 146 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~ 146 (358)
|+..+ ...+..++...+++|+.++.+||++|++.++++|||+||.+||+.....+..|+++ ...|.. .|+.+|..
T Consensus 81 Aa~~~-~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~---~~~p~~-~Y~~sK~~ 155 (338)
T d1udca_ 81 AGLKA-VGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFP---TGTPQS-PYGKSKLM 155 (338)
T ss_dssp CSCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSC---CCCCSS-HHHHHHHH
T ss_pred CCccc-hhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccc---cCCCcc-hHHHHHhh
Confidence 99754 23455678899999999999999999999999999999999998776666666652 344555 89999999
Q ss_pred HHHHHHHHHhh-cCceEEEEecCcccCCCCCCCC------CcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCC
Q psy7590 147 LDVLNKAYYQQ-HGVTYTSVIPCNVFGPHDNYNL------ESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFG 219 (358)
Q Consensus 147 ~E~~~~~~~~~-~g~~~~ilRp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (358)
+|.++..+... .+++++++|++++||+...+.. ....+++.++.... ..
T Consensus 156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~--------------------- 211 (338)
T d1udca_ 156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAV---GR--------------------- 211 (338)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHT---TS---------------------
T ss_pred hhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHh---cC---------------------
Confidence 99999876665 4899999999999999754321 11233343333221 11
Q ss_pred CCccCCCcccCCccccCCCceEEEcCC------CCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcccHHHHH
Q psy7590 220 LDKLDLIPFSLFPFCFTGGDEFKVLGT------GKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEVTIAEVA 292 (358)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~s~~ei~ 292 (358)
++++.++++ +.+.+||+|++|++.++..+...... ...++||++++.++|+.|++
T Consensus 212 ------------------~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~ 273 (338)
T d1udca_ 212 ------------------RDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVV 273 (338)
T ss_dssp ------------------SSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHH
T ss_pred ------------------CCCEEEeCCCcccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHH
Confidence 456777664 67789999999999988887775443 33469999999999999999
Q ss_pred HHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 293 EAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 293 ~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+.+.+.+|.+.++.+.+.++.......+|++|+++.| ||+|. +++++|+++++|++++++
T Consensus 274 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--gwkp~~~l~egi~~ti~w~~~~~~ 334 (338)
T d1udca_ 274 NAFSKACGKPVNYHFAPRREGDLPAYWADASKADREL--NWRVTRTLDEMAQDTWHWQSRHPQ 334 (338)
T ss_dssp HHHHHHHTSCCCEEEECCCTTCCSBCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHCCCCceEECCCCCCCCCEeeECHHHHHHHH--CCCcCCCHHHHHHHHHHHHHhchh
Confidence 9999999999988888877766667788999999999 99975 999999999999999876
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.9e-44 Score=331.91 Aligned_cols=304 Identities=30% Similarity=0.507 Sum_probs=251.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFF 84 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 84 (358)
|||||||||||||++|+++|+++|+. ..........|+.+.+.+.++++..++|+|||+|+..+.......++..++
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~---vi~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~ 79 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDV---ELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFI 79 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTE---EEECCCTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCCHHHHHHCHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCE---EEEecCchhccccCHHHHHHHHhhcCCCEEEEcchhccccccchhhHHHHH
Confidence 68999999999999999999999873 112223346899999999999988889999999987664334456677889
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEE
Q psy7590 85 RVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTS 164 (358)
Q Consensus 85 ~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~i 164 (358)
+.|+.+|.+|+++|.+.+++||||+||.+||+.....+++|+.+....+.+.++.|+.+|..+|++++.+.++.|+++++
T Consensus 80 ~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~i 159 (315)
T d1e6ua_ 80 YQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS 159 (315)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 99999999999999999999999999999999887888999876554555555579999999999999999999999999
Q ss_pred EecCcccCCCCCCCCCcccchhHHHHH-HHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEE
Q psy7590 165 VIPCNVFGPHDNYNLESSHVIPGLIRK-LYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKV 243 (358)
Q Consensus 165 lRp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (358)
+||++||||.........++...+... ....... +.++.+
T Consensus 160 lR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~~~ 200 (315)
T d1e6ua_ 160 VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQK---------------------------------------APDVVV 200 (315)
T ss_dssp EEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHT---------------------------------------CSEEEE
T ss_pred EeeccEECCCCCCCccccccceeeeccchhhhhcc---------------------------------------CCceEE
Confidence 999999999887665555554443322 2222333 778899
Q ss_pred cCCCCceeeeeeHHHHHHHHHHHHHhcC-------CCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCCCCcc
Q psy7590 244 LGTGKPLRQFIYSLDLARLFIWVLREYD-------SVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQL 316 (358)
Q Consensus 244 ~~~~~~~~~~i~v~D~a~~~~~~~~~~~-------~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~ 316 (358)
++++.+.++|+|++|++.++..++.+.. ......++++.+...++.++++.+.+.+|.+..+.+.+.++....
T Consensus 201 ~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~~~~~~~ 280 (315)
T d1e6ua_ 201 WGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTP 280 (315)
T ss_dssp ESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTSCCCCS
T ss_pred cCCCceEEEEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCCCCCCCc
Confidence 9999999999999999999999986532 122347999999999999999999999999998888777666666
Q ss_pred ccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 317 KKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 317 ~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
....|++|+++ | ||+|+ +++|+|+++++||++++
T Consensus 281 ~~~~d~sk~k~-L--g~~p~~~l~e~i~~ti~w~~~N~ 315 (315)
T d1e6ua_ 281 RKLLDVTRLHQ-L--GWYHEISLEAGLASTYQWFLENQ 315 (315)
T ss_dssp BCCBCCHHHHH-T--TCCCCCCHHHHHHHHHHHHHHTC
T ss_pred eeccCHHHHHH-c--CCCCCCCHHHHHHHHHHHHHHcC
Confidence 67789999975 7 99986 99999999999999764
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.2e-43 Score=337.71 Aligned_cols=303 Identities=19% Similarity=0.270 Sum_probs=244.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc-----------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR-----------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~-----------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
|.+.|||||||||||||++|+++|+++|+. ........++..+|+.+.+.+.++++ ++|+|||+|+.
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~d~Vih~a~~ 89 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE--GVDHVFNLAAD 89 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHT--TCSEEEECCCC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhh--cCCeEeecccc
Confidence 667789999999999999999999999984 11122334566799999999999888 69999999987
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccc---cCCCCCCCCcchHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMV---HNGPPHPSNFGYSHAKRM 146 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~---~~~~~~p~~~~Y~~sK~~ 146 (358)
..........+......|+.++.+++++|.+.++++|||+||..+|+.....+.+|... ...+..|.+ .|+.+|.+
T Consensus 90 ~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~-~Yg~sK~~ 168 (363)
T d2c5aa1 90 MGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD-AFGLEKLA 168 (363)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS-HHHHHHHH
T ss_pred cccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCC-HHHHHHHH
Confidence 66444446778889999999999999999999999999999999998765555444321 111566666 79999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCC
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
+|++++.+.+..|++++++||+++||+.+.......... ..........
T Consensus 169 ~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~---~~~~~~~~~~---------------------------- 217 (363)
T d2c5aa1 169 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAP---AAFCRKAQTS---------------------------- 217 (363)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHH---HHHHHHHHHC----------------------------
T ss_pred HHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccc---cccccccccc----------------------------
Confidence 999999999999999999999999999875443222222 1122222222
Q ss_pred cccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCccee
Q psy7590 227 PFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 227 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
..+...++++.+.++|+|++|+++++..++++.. +++||++++..+++.|+++.+.+.+|++.++.
T Consensus 218 -----------~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~~---~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~ 283 (363)
T d2c5aa1 218 -----------TDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIH 283 (363)
T ss_dssp -----------SSCEEEESCSCCEECCEEHHHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEE
T ss_pred -----------cccccccCCCCeEEEEeehhHHHHHHHHHHhCCC---CCeEEEecCCcccHHHHHHHHHHHhCCCCceE
Confidence 5677788999999999999999999999987642 23799999999999999999999999998888
Q ss_pred ecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 307 FDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 307 ~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
..+.+. .......|++|+++.| ||+|+ +|+++|+++++||+++.+
T Consensus 284 ~~~~~~-~~~~~~~d~ska~~~L--Gw~p~~sleegi~~ti~w~~~~~~ 329 (363)
T d2c5aa1 284 HIPGPE-GVRGRNSDNNLIKEKL--GWAPNMRLKEGLRITYFWIKEQIE 329 (363)
T ss_dssp EECCCC-CCSBCEECCHHHHHHH--SCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eCCCCC-CccccccCHHHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHH
Confidence 776543 3445668999999999 99975 999999999999988744
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=1.7e-42 Score=328.06 Aligned_cols=292 Identities=22% Similarity=0.283 Sum_probs=237.4
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-----------CC-------CCceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-----------DD-------ETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-----------~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
.||||||||||||||++|+++|++.|+. .. .....++++.+|++|.+.+..++. +++.|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~--~~~~v~ 78 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA--KADAIV 78 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT--TCSEEE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh--hhhhhh
Confidence 3679999999999999999999999873 00 011245677899999999999998 589999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC------------CCCCccccccCCC
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT------------TYPIDETMVHNGP 132 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~------------~~~~~E~~~~~~~ 132 (358)
|+|+.... .....++...++.|+.++.+|+++|...++ ++|++||.++||... ....+|++ +
T Consensus 79 ~~a~~~~~-~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~----~ 152 (346)
T d1oc2a_ 79 HYAAESHN-DNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET----N 152 (346)
T ss_dssp ECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS----C
T ss_pred hhhhcccc-cchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCC----C
Confidence 99997653 233467888999999999999999999996 799999999997421 12344444 6
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFP 212 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (358)
..|.+ .|+.+|.++|.+++.+++..+++++++||++||||..... .. +..++.....
T Consensus 153 ~~p~s-~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~----~~----~~~~i~~~~~-------------- 209 (346)
T d1oc2a_ 153 YNPSS-PYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE----KF----IPRQITNILA-------------- 209 (346)
T ss_dssp CCCCS-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT----SH----HHHHHHHHHH--------------
T ss_pred CCCCC-HHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc----ch----hHHHHHHHHc--------------
Confidence 77777 7999999999999999999999999999999999976532 22 3333333334
Q ss_pred CCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHH
Q psy7590 213 PGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVA 292 (358)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~ 292 (358)
|.++.+++++.+.++|+|++|+|++++.++.++..++ .||++++...++.+++
T Consensus 210 -------------------------~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 262 (346)
T d1oc2a_ 210 -------------------------GIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGRMGE--TYLIGADGEKNNKEVL 262 (346)
T ss_dssp -------------------------TCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCCTTC--EEEECCSCEEEHHHHH
T ss_pred -------------------------CCceeEeCCCCccccccchhhHHHHHHHHHhhcccCc--cccccccccccchHHH
Confidence 7788899999999999999999999999998876654 6999999999999999
Q ss_pred HHHHHHhCCCc-ceeecCCCCCCccccccchHHHHhhhCCCCccc--cHHHHHHHHHHHHHHhhc
Q psy7590 293 EAIANAFQFKG-RITFDTNAADGQLKKTASNRKLRELRGPGFEFT--PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 293 ~~i~~~~g~~~-~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~--~~~~~l~~~~~~~~~~~~ 354 (358)
+.+.+.++.+. .+...+.++.....+..|++|++++| ||+|+ +|+++|+++++||+++.+
T Consensus 263 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~L--Gw~P~~t~l~e~i~~ti~w~~~n~~ 325 (346)
T d1oc2a_ 263 ELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDEL--GWTPQFTDFSEGLEETIQWYTDNQD 325 (346)
T ss_dssp HHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHHH--CCCCSCCCHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHhCCCCcceEECCCCCCCCceeeeCHHHHHHHH--CCCCcCCCHHHHHHHHHHHHHHHHH
Confidence 99999998754 34455555555556778999999999 99974 799999999999998654
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-41 Score=321.54 Aligned_cols=302 Identities=22% Similarity=0.265 Sum_probs=241.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccC------------CC------------CceeeecccccCCCHHHHHHHHhccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRD------------DE------------TWIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~------------~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
+||||||||||||++|+++|++.|+.- .. ....+.++.+|++|.+.+.+++.+.++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~ 82 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence 499999999999999999999998830 00 112345678999999999999998889
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcch
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGY 140 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y 140 (358)
++|+|+|+..++ ..+..++...++.|+.++.+++++|++.++++|||+||+.+|+.......+++.. ...+.+ +|
T Consensus 83 ~~i~h~Aa~~~~-~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~---~~~~~~-~Y 157 (346)
T d1ek6a_ 83 MAVIHFAGLKAV-GESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP---TGGCTN-PY 157 (346)
T ss_dssp EEEEECCSCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSC---CCCCSS-HH
T ss_pred ccccccccccCc-HhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccccccccccc---ccccCC-hH
Confidence 999999997653 3445678889999999999999999999999999999999998775444443331 233444 79
Q ss_pred HHHHHHHHHHHHHHHhh-cCceEEEEecCcccCCCCCCC------CCcccchhHHHHHHHHhhhhcCccchhhcccCCCC
Q psy7590 141 SHAKRMLDVLNKAYYQQ-HGVTYTSVIPCNVFGPHDNYN------LESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPP 213 (358)
Q Consensus 141 ~~sK~~~E~~~~~~~~~-~g~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (358)
+.+|..+|+.+.++++. .+++.+++|++++||+..... .....+++.++... ..+
T Consensus 158 ~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------------- 219 (346)
T d1ek6a_ 158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVA---IGR--------------- 219 (346)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHH---HTS---------------
T ss_pred HHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHH---HcC---------------
Confidence 99999999999998775 489999999999999975321 11122333332222 122
Q ss_pred CCCCCCCCccCCCcccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCCcc
Q psy7590 214 GANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKDEV 286 (358)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~~~ 286 (358)
+.++.+++ ++.+.|||+|++|+|+++..++..... ...++||++++..+
T Consensus 220 ------------------------~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~ 275 (346)
T d1ek6a_ 220 ------------------------REALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY 275 (346)
T ss_dssp ------------------------SSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred ------------------------CCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence 55666654 356789999999999999988766543 34469999999999
Q ss_pred cHHHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 287 TIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 287 s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
++.|+++.+.+.+|.+.++.+.+.++.+......|++|+++.| ||+|. +|+|+|+++++|++++.+-
T Consensus 276 s~~dl~~~i~~~~~~~~~~~~~~~~~~e~~~~~~d~~k~~~~l--gw~p~~slee~I~~~i~w~~~n~~~ 343 (346)
T d1ek6a_ 276 SVLQMVQAMEKASGKKIPYKVVARREGDVAACYANPSLAQEEL--GWTAALGLDRMCEDLWRWQKQNPSG 343 (346)
T ss_dssp EHHHHHHHHHHHHCSCCCEEEECCCTTCCSEECBCCHHHHHTT--CCCCCCCHHHHHHHHHHHHHHCTTC
T ss_pred cHHHHHHHHHHHhCCCCCeEECCCCCCCCCEeeECHHHHHHHH--CCCcCCCHHHHHHHHHHHHHhCHhh
Confidence 9999999999999999999888887777777888999999999 99976 9999999999999998763
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.7e-41 Score=316.99 Aligned_cols=296 Identities=17% Similarity=0.095 Sum_probs=238.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C--CC---------CceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D--DE---------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~--~~---------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
|+|||||||||||++|+++|+++||+ . .. ....+.++.+|++|.+.+.+.+....+++++|+|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 58999999999999999999999984 1 10 1224566799999999999999988899999998
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHH
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRM 146 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~ 146 (358)
+.... .....++..+++.|+.++.+++++|++.+++ +|++.||..+|+.....+.+|++ +..|.+ .|+.+|.+
T Consensus 81 ~~~~~-~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~----~~~p~~-~Y~~sK~~ 154 (321)
T d1rpna_ 81 AQSFV-GASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENT----PFYPRS-PYGVAKLY 154 (321)
T ss_dssp SCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTS----CCCCCS-HHHHHHHH
T ss_pred ccccc-cccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCC----CccccC-hhHHHHHH
Confidence 87542 2344678889999999999999999999854 88888888999888778888988 777877 79999999
Q ss_pred HHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCC
Q psy7590 147 LDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLI 226 (358)
Q Consensus 147 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (358)
+|.++..+.+..+++++++||+++|||...... ..+.++..+.+....
T Consensus 155 ~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~----~~~~i~~~~~~~~~~---------------------------- 202 (321)
T d1rpna_ 155 GHWITVNYRESFGLHASSGILFNHESPLRGIEF----VTRKVTDAVARIKLG---------------------------- 202 (321)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTS----HHHHHHHHHHHHHTT----------------------------
T ss_pred HHHHHHHHHhhcCCcEEEEEEecccCCCccccc----cHHHHHHHHHHHHhC----------------------------
Confidence 999999999999999999999999999754331 122223333322222
Q ss_pred cccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCccee
Q psy7590 227 PFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 227 ~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
+.+...++++.+.++|+|++|+|+++..+++++.. ..||++++...++.++++.+.+.+|.+.+..
T Consensus 203 -----------~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~~---~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~ 268 (321)
T d1rpna_ 203 -----------KQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKA---DDYVVATGVTTTVRDMCQIAFEHVGLDYRDF 268 (321)
T ss_dssp -----------SCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSC---CCEEECCSCEEEHHHHHHHHHHTTTCCGGGT
T ss_pred -----------CCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCCc---CCceecccccceehhhhHHHHHHhCCCccce
Confidence 44556678999999999999999999999988643 2699999999999999999999999765322
Q ss_pred --ec--CCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 307 --FD--TNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 307 --~~--~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
.. ..++........|++|++++| ||+|. +|+|+|+++++|+.++.+
T Consensus 269 ~~~~~~~~rp~~~~~~~~d~~k~~k~l--G~~P~~~l~e~i~~tv~~~l~~~~ 319 (321)
T d1rpna_ 269 LKIDPAFFRPAEVDVLLGNPAKAQRVL--GWKPRTSLDELIRMMVEADLRRVS 319 (321)
T ss_dssp EEECGGGCCSSCCCBCCBCTHHHHHHH--CCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCccCCccCCHHHHHHHH--CCCcCCCHHHHHHHHHHHHHHHhc
Confidence 22 223334455677999999999 99985 999999999999887643
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.1e-41 Score=321.38 Aligned_cols=305 Identities=18% Similarity=0.211 Sum_probs=234.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc-c------------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK-R------------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~-~------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
|||||||||||||++|+++|+++|+ . .......++++.+|+++.+++.+.+.. ++|+|||+|+...
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~-~~d~Vih~a~~~~ 79 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-KCDVVLPLVAIAT 79 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-HCSEEEECBCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh-CCCcccccccccc
Confidence 4899999999999999999999985 1 111223456779999988777664443 6999999999865
Q ss_pred CccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCcccccc---CCCCCCCCcchHHHHHHHH
Q psy7590 72 GLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVH---NGPPHPSNFGYSHAKRMLD 148 (358)
Q Consensus 72 ~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~---~~~~~p~~~~Y~~sK~~~E 148 (358)
. .....++......|+.++.+++++|.+.++ +++|+||+.+|+.......+|..+. .....|.. .|+.+|..+|
T Consensus 80 ~-~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~Y~~sK~~~E 156 (342)
T d2blla1 80 P-IEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRW-IYSVSKQLLD 156 (342)
T ss_dssp H-HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGG-HHHHHHHHHH
T ss_pred c-cccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcc-hhhhcccchh
Confidence 3 234466778999999999999999999998 5788999999997766665554421 11233434 7999999999
Q ss_pred HHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcc
Q psy7590 149 VLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPF 228 (358)
Q Consensus 149 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (358)
+++..+.+..|++++++|++.+||+...............+..+...+..
T Consensus 157 ~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 206 (342)
T d2blla1 157 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVE------------------------------ 206 (342)
T ss_dssp HHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHH------------------------------
T ss_pred hhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHh------------------------------
Confidence 99999999999999999999999997654332222222334444444445
Q ss_pred cCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCC-CCCceEEccCCC-cccHHHHHHHHHHHhCCCccee
Q psy7590 229 SLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDS-VEPIILSVDEKD-EVTIAEVAEAIANAFQFKGRIT 306 (358)
Q Consensus 229 ~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~v~n~~~~~-~~s~~ei~~~i~~~~g~~~~i~ 306 (358)
|+++.+++++.+.++|+|++|+|+++..+++++.. ..+++||+++++ .+|+.|+++.+.+.+|......
T Consensus 207 ---------g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~ 277 (342)
T d2blla1 207 ---------GSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRH 277 (342)
T ss_dssp ---------TCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGG
T ss_pred ---------CCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCcccc
Confidence 88999999999999999999999999999987532 335699998765 5899999999999998765443
Q ss_pred ecCCC---------------CCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 307 FDTNA---------------ADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 307 ~~~~~---------------~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
..+.. .........|++|++++| ||+|+ +++|+|+++++||+++.+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~l--gw~P~~sleegl~~ti~~y~~~~~ 339 (342)
T d2blla1 278 HFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCL--DWEPKIDMQETIDETLDFFLRTVD 339 (342)
T ss_dssp GSCCCCCEEEC------------CCCCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred ccCcccccceeccccccccccccccccccCHHHHHHHH--CCCcCCCHHHHHHHHHHHHHhCcC
Confidence 22211 112223456999999999 99986 999999999999998875
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=3.8e-41 Score=322.97 Aligned_cols=315 Identities=17% Similarity=0.265 Sum_probs=246.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc-ccc----------------------------------CCCCceeeecccccCCCHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE-EKR----------------------------------DDETWIFVSSKEADLSNLE 49 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~-g~~----------------------------------~~~~~~~~~~~~~Dl~~~~ 49 (358)
|||||||||||||++|+++|+++ |+. .......+.++.+|++|++
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~ 82 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence 59999999999999999999974 441 0011123456689999999
Q ss_pred HHHHHHhcc-CCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCC-------C
Q psy7590 50 STQQLFSKY-KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTT-------Y 121 (358)
Q Consensus 50 ~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~-------~ 121 (358)
.+.++++.. ++|+|||+|+.... .....++....+.|+.++.++++++++.++++++++||.++|+.... .
T Consensus 83 ~l~~~~~~~~~~d~ViH~Aa~~~~-~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 83 FLNGVFTRHGPIDAVVHMCAFLAV-GESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHSCCCCEEEECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred Hhhhhhhccceeehhhcccccccc-cccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 999999865 46999999997652 23345677889999999999999999999999999999999986543 3
Q ss_pred CCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCC-----cccchhHHHHHHHHhh
Q psy7590 122 PIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE-----SSHVIPGLIRKLYDTI 196 (358)
Q Consensus 122 ~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~ 196 (358)
++.|++ +..|.+ .|+.+|..+|++++.+.+.+|++++++||+++|||....... ...++|.++..++...
T Consensus 162 ~~~e~~----~~~p~~-~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~ 236 (383)
T d1gy8a_ 162 PIDINA----KKSPES-PYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI 236 (383)
T ss_dssp CBCTTS----CCBCSS-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred cccccc----CCCCCC-HHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhc
Confidence 455555 677777 899999999999999999999999999999999998765432 2356777777776554
Q ss_pred hhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcC------CCCceeeeeeHHHHHHHHHHHHHhc
Q psy7590 197 EKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLG------TGKPLRQFIYSLDLARLFIWVLREY 270 (358)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~i~v~D~a~~~~~~~~~~ 270 (358)
.......++..... ++++.+++ ++.+.|||+|++|+|++++.++++.
T Consensus 237 ~~~~~~~~~~~~~~---------------------------~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~ 289 (383)
T d1gy8a_ 237 APDQRLTIHEDAST---------------------------DKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYV 289 (383)
T ss_dssp SCC--------------------------------------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhc---------------------------CCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhh
Confidence 44232222222222 66777765 3677899999999999999999864
Q ss_pred CCC-------CCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHH
Q psy7590 271 DSV-------EPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAV 342 (358)
Q Consensus 271 ~~~-------~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l 342 (358)
... ..++||++++.++++.|+++.+.+.+|.+.++...+.++.+......|++|+++.| ||+|+ +++|+|
T Consensus 290 ~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~d~~~~~~d~~k~~k~L--Gw~P~~~l~e~i 367 (383)
T d1gy8a_ 290 EKLGPNDKSKYFSVFNLGTSRGYSVREVIEVARKTTGHPIPVRECGRREGDPAYLVAASDKAREVL--GWKPKYDTLEAI 367 (383)
T ss_dssp HTCCTTTGGGSEEEEEESCSCCEEHHHHHHHHHHHHCCCCCEEEECCCTTCCSEECBCCHHHHHHT--CCCCSCCSHHHH
T ss_pred ccccccccccCccEEEeCCCCceeHHHHHHHHHHHhCCCCceEECCCCCCCcCEeeeCHHHHHHHH--CCccCCCHHHHH
Confidence 321 23689999999999999999999999999988888777766667788999999999 99986 999999
Q ss_pred HHH-HHHHHHhhc
Q psy7590 343 QES-VAWFRENHS 354 (358)
Q Consensus 343 ~~~-~~~~~~~~~ 354 (358)
+++ +.|++++..
T Consensus 368 ~~t~~~w~~~~~~ 380 (383)
T d1gy8a_ 368 METSWKFQRTHPN 380 (383)
T ss_dssp HHHHHHHHHTCTT
T ss_pred HHHHHHHHHhCcc
Confidence 887 578777643
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.3e-41 Score=321.97 Aligned_cols=307 Identities=21% Similarity=0.279 Sum_probs=232.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccC-------CC-----------CceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRD-------DE-----------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~-------~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|.|||||||||||++|+++|+++|++- .. ....++++.+|++|.+.+..++...+||+|||+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 469999999999999999999998730 00 112356678999999999999998889999999
Q ss_pred ccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCC----CCCCccccccCCCCCCCCcchHH
Q psy7590 67 AAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKT----TYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 67 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~----~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
|+..+. .....++..+..+|+.++.+|+++|++.++++|||+||.+||+... ..+++|+. +..|.+ .|+.
T Consensus 82 Aa~~~~-~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~----~~~p~~-~Y~~ 155 (347)
T d1z45a2 82 AGLKAV-GESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC----PLGPTN-PYGH 155 (347)
T ss_dssp CSCCCH-HHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTS----CCCCCS-HHHH
T ss_pred cccccc-cccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCcccccc----CCCCCC-hhHh
Confidence 998652 2445677889999999999999999999999999999999998653 24577776 777777 7999
Q ss_pred HHHHHHHHHHHHHhh--cCceEEEEecCcccCCCCCCCCCc--ccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCC
Q psy7590 143 AKRMLDVLNKAYYQQ--HGVTYTSVIPCNVFGPHDNYNLES--SHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSF 218 (358)
Q Consensus 143 sK~~~E~~~~~~~~~--~g~~~~ilRp~~v~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (358)
+|.++|+++.++.+. .+++++++||+++||+........ ......++..+...+.. +
T Consensus 156 sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~------------------ 216 (347)
T d1z45a2 156 TKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVG-R------------------ 216 (347)
T ss_dssp HHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTT-S------------------
T ss_pred HHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhc-C------------------
Confidence 999999999998654 479999999999999865321111 01111122222222211 0
Q ss_pred CCCccCCCcccCCccccCCCceEEEcCC------CCceeeeeeHHHHHHHHHHHHHhcCC-----CCCceEEccCCCccc
Q psy7590 219 GLDKLDLIPFSLFPFCFTGGDEFKVLGT------GKPLRQFIYSLDLARLFIWVLREYDS-----VEPIILSVDEKDEVT 287 (358)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~~~i~v~D~a~~~~~~~~~~~~-----~~~~v~n~~~~~~~s 287 (358)
++++.++++ +...+|++++.|++.+++.+++.... ...++||++++.++|
T Consensus 217 -------------------~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s 277 (347)
T d1z45a2 217 -------------------REKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGST 277 (347)
T ss_dssp -------------------SSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEE
T ss_pred -------------------CCCeEEeCCCccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCccc
Confidence 334444443 45678899999999999988875322 123689999999999
Q ss_pred HHHHHHHHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcccc
Q psy7590 288 IAEVAEAIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSVAR 357 (358)
Q Consensus 288 ~~ei~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~~~ 357 (358)
+.|+++.+.+.+|.+.++...+.++.+......|++|++++| ||+|. +++|+|+++++|++++..-++
T Consensus 278 ~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~sk~~~~l--Gw~p~~~lee~i~~ti~w~~~np~~~~ 346 (347)
T d1z45a2 278 VFEVYHAFCKASGIDLPYKVTGRRAGDVLNLTAKPDRAKREL--KWQTELQVEDSCKDLWKWTTENPFGYQ 346 (347)
T ss_dssp HHHHHHHHHHHHTCCCCC---------CCCCCBCCHHHHHHT--CCCCCCCHHHHHHHHHHHHHHCTTCSC
T ss_pred HHHHHHHHHHHHCCCCceEeCCCCCCCCCEeeECHHHHHHHH--CCCCCCCHHHHHHHHHHHHHhChhcCc
Confidence 999999999999999888877776666667788999999999 99975 999999999999999876443
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-40 Score=314.00 Aligned_cols=295 Identities=16% Similarity=0.085 Sum_probs=236.3
Q ss_pred CEE-EEEcCCChhHHHHHHHHHHcccc------CC-----------------CCceeeecccccCCCHHHHHHHHhccCC
Q psy7590 5 KII-LVTGGTGLVGKAIEKIVKEEEKR------DD-----------------ETWIFVSSKEADLSNLESTQQLFSKYKP 60 (358)
Q Consensus 5 ~~V-lItGatG~lG~~l~~~L~~~g~~------~~-----------------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 60 (358)
||| ||||||||||+||+++|+++|++ .. .....++++.+|++|++.+..++.+.++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 578 99999999999999999999984 00 0012456789999999999999998899
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC---CEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV---KKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v---~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
++|+|+++... ......++..++++|+.+|.+|+++|+++++ ++|||+||.+|||+....+++|++ +..|.+
T Consensus 81 ~~v~~~~a~~~-~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~----~~~P~~ 155 (347)
T d1t2aa_ 81 TEIYNLGAQSH-VKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETT----PFYPRS 155 (347)
T ss_dssp SEEEECCSCCC-HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTS----CCCCCS
T ss_pred ceeeeeeeccc-cchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCC----CCCCCC
Confidence 99999998754 2234567778899999999999999999874 489999999999987778899998 777877
Q ss_pred cchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANS 217 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (358)
+|+.||..+|+++..+++..+++++++||+++|||...... ..+.+...+......
T Consensus 156 -~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~----~~~~~~~~i~~~~~~------------------- 211 (347)
T d1t2aa_ 156 -PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANF----VTRKISRSVAKIYLG------------------- 211 (347)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTS----HHHHHHHHHHHHHHT-------------------
T ss_pred -HHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCc----cccccceeeehhhcC-------------------
Confidence 79999999999999999999999999999999999755432 223333444444443
Q ss_pred CCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHH
Q psy7590 218 FGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIAN 297 (358)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~ 297 (358)
+.++.+++++.+.++|+|++|++.++..++++.... .++++.....++.+..+.+..
T Consensus 212 --------------------~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 268 (347)
T d1t2aa_ 212 --------------------QLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDEPE---DFVIATGEVHSVREFVEKSFL 268 (347)
T ss_dssp --------------------SCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSSCC---CEEECCSCCEEHHHHHHHHHH
T ss_pred --------------------CcceeecCCCcceeeeeEecHHHHHHHHHhhcCCCc---cceeccccccccchhhhhhhh
Confidence 667788899999999999999999999999885432 488888899999999999999
Q ss_pred HhCCCcceeecC---------------------CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhh
Q psy7590 298 AFQFKGRITFDT---------------------NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENH 353 (358)
Q Consensus 298 ~~g~~~~i~~~~---------------------~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~ 353 (358)
.+++........ .++.......+|++|++++| ||+|+ +|+|+|++++++..+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~skak~~L--gw~P~~sl~e~i~~~I~~~~~~~ 344 (347)
T d1t2aa_ 269 HIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTKAKQKL--NWKPRVAFDELVREMVHADVELM 344 (347)
T ss_dssp HTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHHH
T ss_pred hhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHHHHHHH--CCCcCCCHHHHHHHHHHHHHHHH
Confidence 998764332110 11122234457999999999 99986 99999999998765543
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.6e-39 Score=305.56 Aligned_cols=295 Identities=19% Similarity=0.121 Sum_probs=232.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C-C----------------CCceeeecccccCCCHHHHHHHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D-D----------------ETWIFVSSKEADLSNLESTQQLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~-~----------------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 61 (358)
|++||||||||||+||+++|+++||. . + .....+.++.+|+++.+.+...+...++|
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D 81 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 81 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence 68999999999999999999999983 0 0 11223456789999999999999888899
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC-----CCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG-----VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~-----v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
+|||+|+.... .....++......|+.++.+++++++... ..++++.||+.+|+.. ..+.+|++ +..|.
T Consensus 82 ~Vih~Aa~~~~-~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~----~~~p~ 155 (339)
T d1n7ha_ 82 EVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETT----PFHPR 155 (339)
T ss_dssp EEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTS----CCCCC
T ss_pred hhhhccccccc-cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCC----CCCCc
Confidence 99999998652 23346788999999999999999998643 4478888888888765 46788988 77787
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
+ .|+.+|+.+|.++..+.+.++++++++||++||||..... ...+.+...+......
T Consensus 156 ~-~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~----~~~~~i~~~~~~~~~~------------------ 212 (339)
T d1n7ha_ 156 S-PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGEN----FVTRKITRALGRIKVG------------------ 212 (339)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTT----SHHHHHHHHHHHHHHT------------------
T ss_pred c-hhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCC----CCcchhhHHHHHHhcC------------------
Confidence 7 7999999999999999999999999999999999975432 2222333333333332
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIA 296 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~ 296 (358)
+.+..+.+++.+.+||+|++|+|+++..++++.... .+++..+...++.++++.+.
T Consensus 213 ---------------------~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~ 268 (339)
T d1n7ha_ 213 ---------------------LQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPD---DYVVATEEGHTVEEFLDVSF 268 (339)
T ss_dssp ---------------------SCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSSCC---EEEECCSCEEEHHHHHHHHH
T ss_pred ---------------------CCCeEEeCCCCccccceeeehHHHHHHHHHhcCCCC---ccccccccccccchhhhhhh
Confidence 455667788999999999999999999999986443 46677788999999999999
Q ss_pred HHhCCCcce--e--ecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhc
Q psy7590 297 NAFQFKGRI--T--FDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHS 354 (358)
Q Consensus 297 ~~~g~~~~i--~--~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~ 354 (358)
+.++..... . ....++........|++|+++.| ||+|+ +|+++|+++++|+.+..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~d~~Kak~~L--Gw~P~~~le~gi~~ti~~~~~~~~ 329 (339)
T d1n7ha_ 269 GYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVL--GWKPQVGFEKLVKMMVDEDLELAK 329 (339)
T ss_dssp HHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCceeeeccCCCCCCCCCeeeECHHHHHHHH--CCCcCCCHHHHHHHHHHHHHHHHh
Confidence 999876432 2 22233344445667999999999 99985 999999999999976643
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=5.5e-39 Score=300.80 Aligned_cols=303 Identities=17% Similarity=0.200 Sum_probs=239.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc--------CC---------CCceeeecccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR--------DD---------ETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~--------~~---------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
||||||||||||++|+++|+++|++ .. .....++++.+|+++.+++.+++++.++|+|||+|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 7999999999999999999999973 00 012345667999999999999999888999999999
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceec-CCCCCCCcccc------------ccCCCCCC
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFP-DKTTYPIDETM------------VHNGPPHP 135 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~-~~~~~~~~E~~------------~~~~~~~p 135 (358)
.... .....++...+++|+.||.+|+++|.+.+++++|++||++++. .....+..+.. ....+..|
T Consensus 82 ~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T d1orra_ 82 QVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF 160 (338)
T ss_dssp CCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred cccc-cccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence 8652 2334577899999999999999999999988777777775544 32222211110 01114555
Q ss_pred CCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGA 215 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (358)
.+ .|+.+|...|.++..+.+..+...+++|++++|++..... .....++.++...+.....
T Consensus 161 ~~-~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------- 221 (338)
T d1orra_ 161 HS-PYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFAT-YDQGWVGWFCQKAVEIKNG----------------- 221 (338)
T ss_dssp CH-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCB-TTBCHHHHHHHHHHHHHTT-----------------
T ss_pred cc-ccccccchhhhhhhhhhhccCcccccccccceeecccccc-ccccccchhhHHHHHHHhc-----------------
Confidence 55 7999999999999999999999999999999998875432 2334556666655543221
Q ss_pred CCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccC--CCcccHHHHHH
Q psy7590 216 NSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDE--KDEVTIAEVAE 293 (358)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~--~~~~s~~ei~~ 293 (358)
.++++.+++++.+.++|+|++|++++++.++++.....+++||+.. +..+++.|+++
T Consensus 222 ---------------------~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~ 280 (338)
T d1orra_ 222 ---------------------INKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFK 280 (338)
T ss_dssp ---------------------CCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHH
T ss_pred ---------------------cCCceEEeCCCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHH
Confidence 1778999999999999999999999999999876544445888844 56799999999
Q ss_pred HHHHHhCCCcceeecCCCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHH
Q psy7590 294 AIANAFQFKGRITFDTNAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRE 351 (358)
Q Consensus 294 ~i~~~~g~~~~i~~~~~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~ 351 (358)
.+.+.++.+.++...+.++.+......|++|+++.| ||+|+ +++++|+++++|++.
T Consensus 281 ~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~L--g~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 281 LLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAI--DWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp HHHHHHTCCCCEEEECCCSSCCSEECBCCHHHHHHH--CCCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCceeEeCCCCCCCcCeeeECHHHHHHHH--CCCcCCCHHHHHHHHHHHHHc
Confidence 999999999888888777766667778999999999 99985 999999999999985
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=8.8e-39 Score=307.26 Aligned_cols=307 Identities=16% Similarity=0.141 Sum_probs=227.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCC----------------C------------------CceeeecccccCCCHHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDD----------------E------------------TWIFVSSKEADLSNLES 50 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~----------------~------------------~~~~~~~~~~Dl~~~~~ 50 (358)
|||||||||||||++|+++|++.||+-. . ....++++.+|++|.+.
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 81 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF 81 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence 6999999999999999999999987310 0 01235667999999999
Q ss_pred HHHHHhccCCcEEEEcccccCCccc--cccchhhHHHHHHHHHHHHHHHHHhcCCC-EEEEeeccceecCCCCCCCcccc
Q psy7590 51 TQQLFSKYKPTHVIHLAAMVGGLFH--NMSHNLDFFRVNMKINDNVLDTSYKQGVK-KVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 51 ~~~~~~~~~~d~Vih~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~aa~~~~v~-r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
+.+++++.++|+|||+|+....... ....+..+++.|+.+|.+++++|++.+++ +++++||..+|+... .+..|..
T Consensus 82 l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~-~~~~~~~ 160 (393)
T d1i24a_ 82 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIEEGY 160 (393)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBCSSE
T ss_pred HHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccc-ccccccc
Confidence 9999998889999999997542111 22335578899999999999999999865 677777778887542 2222211
Q ss_pred c----------cCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCC---------cccchhHH
Q psy7590 128 V----------HNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLE---------SSHVIPGL 188 (358)
Q Consensus 128 ~----------~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~---------~~~~~~~~ 188 (358)
. ...+..|.+ .|+.+|+.+|.++..+.++.+++++++||++||||....... .......+
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~-~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASS-FYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTA 239 (393)
T ss_dssp EEEEETTEEEEEECCCCCCS-HHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCH
T ss_pred cccccccccccccccccccc-HHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccc
Confidence 0 111456666 799999999999999999999999999999999998643211 11111223
Q ss_pred HHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHH
Q psy7590 189 IRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLR 268 (358)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~ 268 (358)
+..+...... |+++.+++++.+.|||+|++|++.++..+++
T Consensus 240 i~~~~~~~~~---------------------------------------~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~ 280 (393)
T d1i24a_ 240 LNRFCVQAAV---------------------------------------GHPLTVYGKGGQTRGYLDIRDTVQCVEIAIA 280 (393)
T ss_dssp HHHHHHHHHH---------------------------------------TCCEEEETTSCCEEEEEEHHHHHHHHHHHHH
T ss_pred hhhhhHHhhc---------------------------------------CCeeEEeeecccccccccccchHHHHHHHHH
Confidence 3334444444 8899999999999999999999999999999
Q ss_pred hcCCCCC-ceEEccCCCcccHHHHHHHHHHHh---CCCcceeecCC--CCCCccccccchHHHHhhhCCCCccc-cHHHH
Q psy7590 269 EYDSVEP-IILSVDEKDEVTIAEVAEAIANAF---QFKGRITFDTN--AADGQLKKTASNRKLRELRGPGFEFT-PFQQA 341 (358)
Q Consensus 269 ~~~~~~~-~v~n~~~~~~~s~~ei~~~i~~~~---g~~~~i~~~~~--~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~ 341 (358)
+....+. .+++ ++++.+|+.|+++.+.+.. +........+. .+........|++|+++ | ||+|+ +++++
T Consensus 281 ~~~~~g~~~~~~-~~~~~~si~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-L--Gw~P~~~~~~~ 356 (393)
T d1i24a_ 281 NPAKAGEFRVFN-QFTEQFSVNELASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLME-L--GLEPHYLSDSL 356 (393)
T ss_dssp SCCCTTCEEEEE-ECSEEEEHHHHHHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHHH-T--TCCCCCCCHHH
T ss_pred hhcccceeeeec-CCCCeeEHHHHHHHHHHHHHhhCCCcceeeccCCCCCCCccEecCCHHHHHH-c--CCccccCHHHH
Confidence 8766543 2233 4457899999999998875 43444443332 23334455678899986 7 99987 99999
Q ss_pred HHHHHHHHHHhhccc
Q psy7590 342 VQESVAWFRENHSVA 356 (358)
Q Consensus 342 l~~~~~~~~~~~~~~ 356 (358)
++++++|+++.++..
T Consensus 357 i~~~~~~~~~~k~~~ 371 (393)
T d1i24a_ 357 LDSLLNFAVQFKDRV 371 (393)
T ss_dssp HHHHHHHHHHTGGGC
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999887643
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=1.1e-36 Score=278.26 Aligned_cols=274 Identities=20% Similarity=0.245 Sum_probs=226.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFF 84 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 84 (358)
|||||||||||||++|+++|+++|+ ....+.....|+.|.+++.++++..++|+|||+|+.... ......+....
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~----~Vi~~~r~~~D~~d~~~~~~~l~~~~~d~vih~a~~~~~-~~~~~~~~~~~ 76 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNV----EVIPTDVQDLDITNVLAVNKFFNEKKPNVVINCAAHTAV-DKCEEQYDLAY 76 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSE----EEEEECTTTCCTTCHHHHHHHHHHHCCSEEEECCCCCCH-HHHHHCHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC----EEEEeechhccCCCHHHHHHHHHHcCCCEEEeecccccc-ccccccchhhc
Confidence 5899999999999999999999987 344445567899999999999998889999999997652 23446677888
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceEEE
Q psy7590 85 RVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTYTS 164 (358)
Q Consensus 85 ~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~~i 164 (358)
..|+..+..+++.+...+. .++++||..+|+.....+.+|++ ++.|.. .|+.+|...|++++. .+.++++
T Consensus 77 ~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~----~~~~~~-~~~~~k~~~e~~~~~----~~~~~~i 146 (281)
T d1vl0a_ 77 KINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFD----EVNPQS-AYGKTKLEGENFVKA----LNPKYYI 146 (281)
T ss_dssp HHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTS----CCCCCS-HHHHHHHHHHHHHHH----HCSSEEE
T ss_pred ccccccccccccccccccc-cccccccceeeeccccccccccc----cccchh-hhhhhhhHHHHHHHH----hCCCccc
Confidence 9999999999999988875 78889999999988888899998 777777 799999999998865 4788999
Q ss_pred EecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEc
Q psy7590 165 VIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVL 244 (358)
Q Consensus 165 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 244 (358)
+||+++||+..+ ++..+...... +.++.+.
T Consensus 147 ~R~~~vyG~~~~-----------~~~~~~~~~~~---------------------------------------~~~~~~~ 176 (281)
T d1vl0a_ 147 VRTAWLYGDGNN-----------FVKTMINLGKT---------------------------------------HDELKVV 176 (281)
T ss_dssp EEECSEESSSSC-----------HHHHHHHHHHH---------------------------------------CSEEEEE
T ss_pred cceeEEeCCCcc-----------cccchhhhhcc---------------------------------------CCceeec
Confidence 999999999754 23333444444 6677766
Q ss_pred CCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCCCCCc-----cccc
Q psy7590 245 GTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNAADGQ-----LKKT 319 (358)
Q Consensus 245 ~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~~~~~-----~~~~ 319 (358)
+ +..++|+|++|+++++..++++... ++||+++++.+|+.|+++.+++.+|++.++...+...... ....
T Consensus 177 ~--~~~~~~i~v~D~~~~~~~~~~~~~~---g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i~~i~~~~~~~~a~rp~~~~ 251 (281)
T d1vl0a_ 177 H--DQVGTPTSTVDLARVVLKVIDEKNY---GTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSV 251 (281)
T ss_dssp S--SCEECCEEHHHHHHHHHHHHHHTCC---EEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCC
T ss_pred C--Cceeccchhhhhhhhhhhhhhhccc---CceeEeCCCccchHHHHHHHHHHhCCCceEEeccHHHcCCcCCCccccc
Confidence 5 4789999999999999999998654 3899999999999999999999999998877654332111 1234
Q ss_pred cchHHHHhhhCCCCccccHHHHHHHHHHHHH
Q psy7590 320 ASNRKLRELRGPGFEFTPFQQAVQESVAWFR 350 (358)
Q Consensus 320 ~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~ 350 (358)
+|++|+++.+ ||++++|+++|++++++++
T Consensus 252 ld~~k~~~~~--g~~~~~~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 252 LRNYMLELTT--GDITREWKESLKEYIDLLQ 280 (281)
T ss_dssp BCCHHHHHTT--CCCCCBHHHHHHHHHHHHT
T ss_pred cCHHHHHHHh--CCCCCCHHHHHHHHHHHhc
Confidence 7999999999 9998899999999999985
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=1.1e-35 Score=281.03 Aligned_cols=297 Identities=16% Similarity=0.214 Sum_probs=225.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.|||||||||||||++|+++|++.|+. ... ....++++.+|++|++.+.++++...+|+|+|+|
T Consensus 8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~a 87 (356)
T d1rkxa_ 8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 87 (356)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhhh
Confidence 479999999999999999999999983 111 1224667799999999999999988899999999
Q ss_pred cccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC-CEEEEeeccceecCCC-CCCCccccccCCCCCCCCcchHHHHH
Q psy7590 68 AMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV-KKVVSCLSTCIFPDKT-TYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-~r~V~~SS~~vy~~~~-~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
+.... ..+..++....++|+.++.+++++|++.+. +.+++.||..++.... ..+.+|++ +..|.+ +|+.+|.
T Consensus 88 a~~~~-~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~----~~~p~~-~y~~~k~ 161 (356)
T d1rkxa_ 88 AQPLV-RLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENE----AMGGYD-PYSNSKG 161 (356)
T ss_dssp SCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTS----CBCCSS-HHHHHHH
T ss_pred ccccc-cccccCCccccccccccchhhhhhhhcccccccccccccccccccccccccccccc----ccCCCC-ccccccc
Confidence 97642 234567889999999999999999999874 4555555555554433 34566666 666666 8999999
Q ss_pred HHHHHHHHHHh---------hcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCC
Q psy7590 146 MLDVLNKAYYQ---------QHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGAN 216 (358)
Q Consensus 146 ~~E~~~~~~~~---------~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (358)
..|..+..+.. +.++.++++||+++|||.+... ..+++.++..+ ..
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~---~~~i~~~~~~~----~~------------------ 216 (356)
T d1rkxa_ 162 CAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL---DRIVPDILRAF----EQ------------------ 216 (356)
T ss_dssp HHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS---SCHHHHHHHHH----HT------------------
T ss_pred cchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh---hHHHHHHHHHH----hC------------------
Confidence 99999887765 3478999999999999976432 23444444433 32
Q ss_pred CCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCC-----CceEEccCCCcccHHHH
Q psy7590 217 SFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVE-----PIILSVDEKDEVTIAEV 291 (358)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~-----~~v~n~~~~~~~s~~ei 291 (358)
+.+ .+++.+.+.++|+|++|++.++..++.+..... ...++..++..+++.++
T Consensus 217 ---------------------~~~-~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (356)
T d1rkxa_ 217 ---------------------SQP-VIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNI 274 (356)
T ss_dssp ---------------------TCC-EECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHH
T ss_pred ---------------------CCc-eEEeeccccccccccccccchhhhhhhhhcccccccccccccccccccccccchh
Confidence 444 457888899999999999999999988754321 12233344567999999
Q ss_pred HHHHHHHhCCCcceeecC-CCCCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHHHHhhcc
Q psy7590 292 AEAIANAFQFKGRITFDT-NAADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWFRENHSV 355 (358)
Q Consensus 292 ~~~i~~~~g~~~~i~~~~-~~~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~~~~~~~ 355 (358)
++.+.+.++....+.... .++.+......|++|++++| ||+|+ +++++|+++++||+...+.
T Consensus 275 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~skak~~L--Gw~P~~~l~egi~~ti~wyk~~~~~ 338 (356)
T d1rkxa_ 275 VEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSKAKMQL--GWHPRWNLNTTLEYIVGWHKNWLSG 338 (356)
T ss_dssp HHHHHHHHCTTCCEEC-------CCCCCCBCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred hhhhHHHhCCCccEEEcCCCCCCCcCeeeEcHHHHHHHH--CCCcCCCHHHHHHHHHHHHHHHHcC
Confidence 999999999887766543 23334555678999999999 99985 9999999999999987653
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=4.9e-34 Score=269.27 Aligned_cols=287 Identities=16% Similarity=0.171 Sum_probs=202.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C-------------CCCceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D-------------DETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~-------------~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
.++|||||||||||++|+++|+++|+. . .........+.+|+++.+++.+++. ++|+|+
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--~~~~v~ 88 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--GAAGVA 88 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--TCSEEE
T ss_pred cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc--cchhhh
Confidence 479999999999999999999999973 0 1111222345789999999999998 599999
Q ss_pred EcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccceecCCC----CCCCccccc-----------
Q psy7590 65 HLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ-GVKKVVSCLSTCIFPDKT----TYPIDETMV----------- 128 (358)
Q Consensus 65 h~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~-~v~r~V~~SS~~vy~~~~----~~~~~E~~~----------- 128 (358)
|+++... ...++...++.|+.+|.+++++|.+. ++++|||+||.+++.... ....+|+.+
T Consensus 89 ~~a~~~~----~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 164 (342)
T d1y1pa1 89 HIASVVS----FSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL 164 (342)
T ss_dssp ECCCCCS----CCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred hhccccc----ccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence 9999865 33567788899999999999999997 599999999986543211 122233221
Q ss_pred -cCCCCCCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchh
Q psy7590 129 -HNGPPHPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVF 205 (358)
Q Consensus 129 -~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (358)
...+..|.. +|+.+|..+|++++.+.+.+ +++++++||+++|||...+.... ..+..++..++ .
T Consensus 165 ~e~~~~~p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~-~~~~~~~~~l~----~------- 231 (342)
T d1y1pa1 165 PESDPQKSLW-VYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQS-GSTSGWMMSLF----N------- 231 (342)
T ss_dssp CTTSTTHHHH-HHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCC-CHHHHHHHHHH----T-------
T ss_pred cccCCCCCcC-cccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccc-cchHHHHHHHH----c-------
Confidence 111333433 79999999999999998876 47889999999999975543322 23344444433 2
Q ss_pred hcccCCCCCCCCCCCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCc
Q psy7590 206 ESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDE 285 (358)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~ 285 (358)
|+..... .+.+.++|+|++|+|++++.+++++...+. +++++++.
T Consensus 232 --------------------------------g~~~~~~-~~~~~~~~v~v~Dva~~~i~~l~~~~~~g~--~~~~~~~~ 276 (342)
T d1y1pa1 232 --------------------------------GEVSPAL-ALMPPQYYVSAVDIGLLHLGCLVLPQIERR--RVYGTAGT 276 (342)
T ss_dssp --------------------------------TCCCHHH-HTCCSEEEEEHHHHHHHHHHHHHCTTCCSC--EEEECCEE
T ss_pred --------------------------------CCcCccc-CCccceeeeeHHHHHHHHHHhhcCccccce--EEEEcCCc
Confidence 4433322 345568999999999999999998766554 67888899
Q ss_pred ccHHHHHHHHHHHhCC-CcceeecCCCCC-CccccccchHHHHhhhCCCCcc-ccHHHHHHHHHH
Q psy7590 286 VTIAEVAEAIANAFQF-KGRITFDTNAAD-GQLKKTASNRKLRELRGPGFEF-TPFQQAVQESVA 347 (358)
Q Consensus 286 ~s~~ei~~~i~~~~g~-~~~i~~~~~~~~-~~~~~~~~~~k~~~~l~~G~~~-~~~~~~l~~~~~ 347 (358)
+++.|+++.+.+.++. +.+......... .......+.+++ +.| ||.+ +++|++|+|+++
T Consensus 277 ~t~~eia~~i~k~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~-k~l--g~~~~~~lee~i~d~I~ 338 (342)
T d1y1pa1 277 FDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEIL-KSL--GRPGWRSIEESIKDLVG 338 (342)
T ss_dssp ECHHHHHHHHHHHCTTSCCCCCCCCCCCCCCEECCHHHHHHH-HHT--TCCSCCCHHHHHHHHHC
T ss_pred eEHHHHHHHHHHHcCCCcCCccCCccCcccccccchHHHHHH-HHc--CCCCCcCHHHHHHHHHH
Confidence 9999999999999853 222222111111 111112233444 457 9995 699999999975
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1e-33 Score=260.64 Aligned_cols=285 Identities=20% Similarity=0.237 Sum_probs=195.4
Q ss_pred EEEEcCCChhHHHHHHHHHHccccC-------CCCce---eeecccccCCCHHHHHHHHhc----cCCcEEEEcccccCC
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKRD-------DETWI---FVSSKEADLSNLESTQQLFSK----YKPTHVIHLAAMVGG 72 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~~-------~~~~~---~~~~~~~Dl~~~~~~~~~~~~----~~~d~Vih~a~~~~~ 72 (358)
|||||||||||++|+++|+++|+.. ..... ..+....|..+.+.+...... ..+++|+|+|+...
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~~- 80 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSS- 80 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCC-
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhccccc-
Confidence 8999999999999999999998620 01011 111222333444444333321 25899999998754
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHH
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNK 152 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 152 (358)
....+.......|+.++.+++++++..+++ +|+.||..+|........+|+. +..|.+ .|+.+|..+|.+++
T Consensus 81 --~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~----~~~~~~-~Y~~~K~~~e~~~~ 152 (307)
T d1eq2a_ 81 --TTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESRE----YEKPLN-VYGYSKFLFDEYVR 152 (307)
T ss_dssp --TTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGG----GCCCSS-HHHHHHHHHHHHHH
T ss_pred --cccccccccccccccccccccccccccccc-cccccccccccccccccccccc----cccccc-ccccccchhhhhcc
Confidence 344567778899999999999999999985 7778888777766555566655 555666 79999999999999
Q ss_pred HHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCc
Q psy7590 153 AYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFP 232 (358)
Q Consensus 153 ~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (358)
.+.++++++++++||+++|||..........+++.++. .+..
T Consensus 153 ~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~----~~~~---------------------------------- 194 (307)
T d1eq2a_ 153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNT----QLNN---------------------------------- 194 (307)
T ss_dssp HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHH----HHHC----------------------------------
T ss_pred ccccccccccccccceeEeecccccccccccccccccc----cccc----------------------------------
Confidence 99999999999999999999987644333333443333 3333
Q ss_pred cccCCCceE-EEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCcceeecCCC
Q psy7590 233 FCFTGGDEF-KVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRITFDTNA 311 (358)
Q Consensus 233 ~~~~~g~~~-~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i~~~~~~ 311 (358)
++.. ...+++...++|+|++|++.++..++.+... .+||++++...|+.|+++.+.+..+ +..+.+.+.+
T Consensus 195 -----~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~~---~~~~~~~~~~~si~~i~~~i~~~~~-~~~i~~~~~~ 265 (307)
T d1eq2a_ 195 -----GESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVS---GIFNLGTGRAESFQAVADATLAYHK-KGQIEYIPFP 265 (307)
T ss_dssp ------------------CBCEEEHHHHHHHHHHHHHHCCC---EEEEESCSCCBCHHHHHHHC----------------
T ss_pred -----ccceeeecCccceeeeeeecccHHHHHHHHhhhccc---cccccccccchhHHHHHHHHHHhcC-CCCeeEeeCC
Confidence 4433 3457778889999999999999999987533 3899999999999999999988765 3344333221
Q ss_pred ----CCCccccccchHHHHhhhCCCCccc-cHHHHHHHHHHHH
Q psy7590 312 ----ADGQLKKTASNRKLRELRGPGFEFT-PFQQAVQESVAWF 349 (358)
Q Consensus 312 ----~~~~~~~~~~~~k~~~~l~~G~~~~-~~~~~l~~~~~~~ 349 (358)
.........|++|+++.+ ||+|. +|+|+|+++++|+
T Consensus 266 ~~~~~~~~~~~~~d~~k~~~~~--~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 266 DKLKGRYQAFTQADLTNLRAAG--YDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp ------CCCSCCBCCHHHHHTT--CCCCCCCHHHHHHHHHHHT
T ss_pred ccCCCCCceeeecCHHHHHHHH--CCCCCCCHHHHHHHHHHhC
Confidence 112223445889999999 99965 9999999999995
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=100.00 E-value=1.6e-32 Score=251.77 Aligned_cols=281 Identities=14% Similarity=0.085 Sum_probs=210.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc--CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhh
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR--DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLD 82 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~--~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~ 82 (358)
|||||||||||||++|++.|.+.|+. ...+. ..+.+|++|++.+.+++++.+||+||||||.... .....++..
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~---~~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~-~~~~~~~~~ 76 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHS---KEFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAV-DKAESEPEL 76 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTC---SSSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCH-HHHTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCC---ccccCcCCCHHHHHHHHHHcCCCEEEEecccccc-cccccCccc
Confidence 58999999999999999999998862 11111 1236899999999999998889999999997642 345678888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcCceE
Q psy7590 83 FFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQHGVTY 162 (358)
Q Consensus 83 ~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~g~~~ 162 (358)
.+..|+.++.+|+++|++.++ +++++||+.+|+.....+.+|++ ++.|.+ .|+.+|..+|+.+..+. ...
T Consensus 77 ~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~----~~~p~~-~y~~~k~~~e~~~~~~~----~~~ 146 (298)
T d1n2sa_ 77 AQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETD----ATSPLN-VYGKTKLAGEKALQDNC----PKH 146 (298)
T ss_dssp HHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTS----CCCCSS-HHHHHHHHHHHHHHHHC----SSE
T ss_pred cccccccccccchhhhhcccc-ccccccccccccCCCCCCCcccc----ccCCCc-hHhhhhhhhhhhHHhhh----ccc
Confidence 999999999999999999886 69999999999888788999998 788877 79999999999987643 345
Q ss_pred EEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccCCccccCCCceEE
Q psy7590 163 TSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSLFPFCFTGGDEFK 242 (358)
Q Consensus 163 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 242 (358)
.++|++..++..... ....+...+.. +.++.
T Consensus 147 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~---------------------------------------~~~~~ 177 (298)
T d1n2sa_ 147 LIFRTSWVYAGKGNN----------FAKTMLRLAKE---------------------------------------RQTLS 177 (298)
T ss_dssp EEEEECSEECSSSCC----------HHHHHHHHHHH---------------------------------------CSEEE
T ss_pred ccccccceeeccCCc----------cchhhhhhhcc---------------------------------------cceee
Confidence 666666655443221 12223333333 55665
Q ss_pred EcCCCCceeeeeeHHHHHHHHHHHHHhc--CCCCCceEEccCCCcccHHHHHHHHHHHhCCC---cce---eecCCCCC-
Q psy7590 243 VLGTGKPLRQFIYSLDLARLFIWVLREY--DSVEPIILSVDEKDEVTIAEVAEAIANAFQFK---GRI---TFDTNAAD- 313 (358)
Q Consensus 243 ~~~~~~~~~~~i~v~D~a~~~~~~~~~~--~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~---~~i---~~~~~~~~- 313 (358)
+. +...++++|+.|+++++..++... .....++||+++++.+++.++++.+.+..++. ..+ ...+....
T Consensus 178 ~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~ 255 (298)
T d1n2sa_ 178 VI--NDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYP 255 (298)
T ss_dssp EE--CSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSC
T ss_pred cc--cceeecccccchHHHHHHHHHhhhhccccccccccccCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcC
Confidence 54 345788999999999998887642 22234599999999999999999998876432 111 11111110
Q ss_pred ----CccccccchHHHHhhhCCCCccccHHHHHHHHHHHHHHh
Q psy7590 314 ----GQLKKTASNRKLRELRGPGFEFTPFQQAVQESVAWFREN 352 (358)
Q Consensus 314 ----~~~~~~~~~~k~~~~l~~G~~~~~~~~~l~~~~~~~~~~ 352 (358)
.+....+|++|+++.| ||+|++|+++|+++++.+...
T Consensus 256 ~~a~RP~~~~ld~~K~~~~~--~~~~~~~~~gl~~~i~~~~~~ 296 (298)
T d1n2sa_ 256 TPASRPGNSRLNTEKFQRNF--DLILPQWELGVKRMLTEMFTT 296 (298)
T ss_dssp CSSCCCSBCCBCCHHHHHHH--TCCCCBHHHHHHHHHHHHHSC
T ss_pred ccCCCccccccCHHHHHHHH--CCCCCcHHHHHHHHHHHHHhh
Confidence 0112357999999999 999889999999999988754
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.94 E-value=5.2e-28 Score=222.62 Aligned_cols=229 Identities=14% Similarity=0.067 Sum_probs=168.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------------CceeeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------------TWIFVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
+++||||||||||+|++|+++|+++|+. ... ....++++.+|+.|.+.+.+++. +++++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~--~~~~~ 79 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK--QVDVV 79 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT--TCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc--Ccchh
Confidence 3468999999999999999999999983 111 11235677999999999999998 58999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
||+++.... ..|..++.+++++|.+.+..+++++||.+++++.. .. +..|.. .|..+
T Consensus 80 ~~~~~~~~~------------~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~------~~----~~~~~~-~~~~~ 136 (312)
T d1qyda_ 80 ISALAGGVL------------SHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIM------EH----ALQPGS-ITFID 136 (312)
T ss_dssp EECCCCSSS------------STTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSC------CC----CCSSTT-HHHHH
T ss_pred hhhhhhccc------------ccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCc------cc----ccchhh-hhhHH
Confidence 999876431 12345667789999999877888899876654332 11 333333 46666
Q ss_pred HHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCcc
Q psy7590 144 KRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223 (358)
Q Consensus 144 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
|...+++ ....+++++++||+.+||+........ ...
T Consensus 137 ~~~~~~~----~~~~~~~~~i~r~~~~~g~~~~~~~~~----------~~~----------------------------- 173 (312)
T d1qyda_ 137 KRKVRRA----IEAASIPYTYVSSNMFAGYFAGSLAQL----------DGH----------------------------- 173 (312)
T ss_dssp HHHHHHH----HHHTTCCBCEEECCEEHHHHTTTSSCT----------TCC-----------------------------
T ss_pred HHHHHHh----hcccccceEEeccceeecCCccchhhH----------HHH-----------------------------
Confidence 6666554 455789999999999999754321100 000
Q ss_pred CCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCc
Q psy7590 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKG 303 (358)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~ 303 (358)
....++++.+++++++.++|||++|+|++++.++.++...++.+|++++++.+|++|+++.+++++|.+.
T Consensus 174 ----------~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~ 243 (312)
T d1qyda_ 174 ----------MMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNL 243 (312)
T ss_dssp ----------SSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred ----------hhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCCCC
Confidence 0011667778899999999999999999999999887665554677777788999999999999999987
Q ss_pred ceeecC
Q psy7590 304 RITFDT 309 (358)
Q Consensus 304 ~i~~~~ 309 (358)
++...+
T Consensus 244 ~~~~i~ 249 (312)
T d1qyda_ 244 DKIYIS 249 (312)
T ss_dssp EECCBC
T ss_pred eEEECC
Confidence 766443
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.94 E-value=1.1e-27 Score=218.86 Aligned_cols=221 Identities=13% Similarity=0.090 Sum_probs=163.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------------ceeeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------------WIFVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
.|||||||||||+|++|+++|++.|++ .... ...++++.+|+.+...+.+.+. +++.|
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~~~v 80 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK--NVDVV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH--TCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh--hceee
Confidence 468999999999999999999999984 1111 1235667899999999999998 58999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
||+++... +.++.++++++..++++++++.||.....+. . +..+....+...
T Consensus 81 i~~~~~~~----------------~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~-------~-----~~~~~~~~~~~~ 132 (307)
T d1qyca_ 81 ISTVGSLQ----------------IESQVNIIKAIKEVGTVKRFFPSEFGNDVDN-------V-----HAVEPAKSVFEV 132 (307)
T ss_dssp EECCCGGG----------------SGGGHHHHHHHHHHCCCSEEECSCCSSCTTS-------C-----CCCTTHHHHHHH
T ss_pred eecccccc----------------cchhhHHHHHHHHhccccceeeecccccccc-------c-----cccccccccccc
Confidence 99987643 2345568899999998889988886443221 1 111111145555
Q ss_pred HHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCcc
Q psy7590 144 KRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKL 223 (358)
Q Consensus 144 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (358)
+...+..+ ...+++++++||+++||+...... .+.....+
T Consensus 133 ~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~~~~-----------~~~~~~~~------------------------- 172 (307)
T d1qyca_ 133 KAKVRRAI----EAEGIPYTYVSSNCFAGYFLRSLA-----------QAGLTAPP------------------------- 172 (307)
T ss_dssp HHHHHHHH----HHHTCCBEEEECCEEHHHHTTTTT-----------CTTCSSCC-------------------------
T ss_pred cccccchh----hccCCCceecccceecCCCccchh-----------hhhhhhhh-------------------------
Confidence 55555544 456899999999999998643211 01111111
Q ss_pred CCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCCcccHHHHHHHHHHHhCCCc
Q psy7590 224 DLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKDEVTIAEVAEAIANAFQFKG 303 (358)
Q Consensus 224 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~ 303 (358)
+..+.+++.+++.++|+|++|+|++++.++.++...++.+|++++++.+|+.|+++.+.+++|.+.
T Consensus 173 --------------~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~~~ 238 (307)
T d1qyca_ 173 --------------RDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTL 238 (307)
T ss_dssp --------------SSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTSCC
T ss_pred --------------cccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCCCC
Confidence 567778889999999999999999999999887665555677778899999999999999999988
Q ss_pred ceeec
Q psy7590 304 RITFD 308 (358)
Q Consensus 304 ~i~~~ 308 (358)
++...
T Consensus 239 ~~~~~ 243 (307)
T d1qyca_ 239 EKAYV 243 (307)
T ss_dssp EEEEE
T ss_pred cEEEC
Confidence 76644
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=7e-26 Score=197.90 Aligned_cols=191 Identities=18% Similarity=0.167 Sum_probs=145.2
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc-----------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR-----------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~-----------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
|.|+||+||||||++|++|+++|+++|++ .......++++.+|++|++++.+++. ++|+|||+++..
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~--~~d~vi~~~g~~ 78 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVA--GQDAVIVLLGTR 78 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHT--TCSEEEECCCCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhc--CCCEEEEEeccC
Confidence 67889999999999999999999999983 12233456778999999999999999 599999998864
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHH
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVL 150 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~ 150 (358)
.. ..+ .+.+..+++++++++++++++|||++||.+++.+.... .+....|...|..+|++
T Consensus 79 ~~-----~~~---~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~------------~~~~~~~~~~~~~~e~~ 138 (205)
T d1hdoa_ 79 ND-----LSP---TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------------PPRLQAVTDDHIRMHKV 138 (205)
T ss_dssp TC-----CSC---CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------------CGGGHHHHHHHHHHHHH
T ss_pred Cc-----hhh---hhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCccc------------cccccccchHHHHHHHH
Confidence 31 111 23567899999999999999999999999887654321 11112688899999988
Q ss_pred HHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcccC
Q psy7590 151 NKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPFSL 230 (358)
Q Consensus 151 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (358)
++ .+|++++++||+.+++....
T Consensus 139 l~----~~~~~~tiirp~~~~~~~~~------------------------------------------------------ 160 (205)
T d1hdoa_ 139 LR----ESGLKYVAVMPPHIGDQPLT------------------------------------------------------ 160 (205)
T ss_dssp HH----HTCSEEEEECCSEEECCCCC------------------------------------------------------
T ss_pred HH----hcCCceEEEecceecCCCCc------------------------------------------------------
Confidence 75 37999999999999865322
Q ss_pred CccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEcc
Q psy7590 231 FPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVD 281 (358)
Q Consensus 231 ~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~ 281 (358)
+ ...+..++.....+|+.+|+|++++.+++++...+. .+.++
T Consensus 161 -------~-~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~-~~~~s 202 (205)
T d1hdoa_ 161 -------G-AYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEYDGH-STYPS 202 (205)
T ss_dssp -------S-CCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTC-EEEEE
T ss_pred -------c-cEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCE-EEecC
Confidence 1 122333455566789999999999999988764443 44443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7.3e-26 Score=201.63 Aligned_cols=146 Identities=15% Similarity=0.169 Sum_probs=117.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccc--c-----------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEK--R-----------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~--~-----------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
++|+|||||||||+|++|+++|+++|+ + .......++...+|+.+.+++.++++ ++|+|||+++.
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~--~~d~vi~~~~~ 90 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQ--GHDVGFCCLGT 90 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGS--SCSEEEECCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccc--ccccccccccc
Confidence 346899999999999999999999985 1 11223344555688888888888888 59999999986
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHH
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDV 149 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~ 149 (358)
.. ...+...+.++|+.++.+++++|.+.++++|||+||.++++.. .+ .|+++|..+|+
T Consensus 91 ~~----~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~-----------------~~-~Y~~~K~~~E~ 148 (232)
T d2bkaa1 91 TR----GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS-----------------NF-LYLQVKGEVEA 148 (232)
T ss_dssp CH----HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-----------------SS-HHHHHHHHHHH
T ss_pred cc----cccchhhhhhhcccccceeeecccccCccccccCCccccccCc-----------------cc-hhHHHHHHhhh
Confidence 43 2345677899999999999999999999999999999875432 23 69999999999
Q ss_pred HHHHHHhhcCc-eEEEEecCcccCCCCC
Q psy7590 150 LNKAYYQQHGV-TYTSVIPCNVFGPHDN 176 (358)
Q Consensus 150 ~~~~~~~~~g~-~~~ilRp~~v~G~~~~ 176 (358)
.+.+ .++ +++|+||+.+||+...
T Consensus 149 ~l~~----~~~~~~~IlRP~~i~G~~~~ 172 (232)
T d2bkaa1 149 KVEE----LKFDRYSVFRPGVLLCDRQE 172 (232)
T ss_dssp HHHT----TCCSEEEEEECCEEECTTGG
T ss_pred cccc----ccccceEEecCceeecCCCc
Confidence 8865 465 4999999999998654
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.89 E-value=2.7e-23 Score=183.31 Aligned_cols=222 Identities=16% Similarity=0.123 Sum_probs=153.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc--------CCC----CceeeecccccCCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR--------DDE----TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~--------~~~----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
+|++|||||||||||++|++.|+++|+. ... ....++.+.+|+++.+++.++++ ++|+|||+++..
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vi~~a~~~ 79 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQ--GIDALVILTSAV 79 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHT--TCSEEEECCCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcEEEEeeeccccccccccc--cceeeEEEEeec
Confidence 5789999999999999999999999963 110 11245566899999999999999 599999999864
Q ss_pred CCcc------------ccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 71 GGLF------------HNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 71 ~~~~------------~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
.... ..........++|+.++.+++..+.....+.+.+.|+..++...... ...+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~----------~~~~~~- 148 (252)
T d2q46a1 80 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPL----------NKLGNG- 148 (252)
T ss_dssp CEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGG----------GGGGGC-
T ss_pred cccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCccc----------cccccc-
Confidence 3111 11233556778899999999999999999999999887665432110 011111
Q ss_pred chHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSF 218 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (358)
.|...+...+.+ ...+|++++++||+++||+...... .+ . ..
T Consensus 149 ~~~~~~~~~~~~----~~~~~~~~~ilRp~~v~g~~~~~~~----~~-------~---~~-------------------- 190 (252)
T d2q46a1 149 NILVWKRKAEQY----LADSGTPYTIIRAGGLLDKEGGVRE----LL-------V---GK-------------------- 190 (252)
T ss_dssp CHHHHHHHHHHH----HHHSSSCEEEEEECEEECSCTTSSC----EE-------E---ES--------------------
T ss_pred chhhhhhhhhhh----hhcccccceeecceEEECCCcchhh----hh-------h---cc--------------------
Confidence 466665555444 4557999999999999999754211 00 0 00
Q ss_pred CCCccCCCcccCCccccCCCceEEEcCCCCceeeeeeHHHHHHHHHHHHHhcCCCCCceEEccCCC---cccHHHHHHHH
Q psy7590 219 GLDKLDLIPFSLFPFCFTGGDEFKVLGTGKPLRQFIYSLDLARLFIWVLREYDSVEPIILSVDEKD---EVTIAEVAEAI 295 (358)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~v~n~~~~~---~~s~~ei~~~i 295 (358)
+.. -.....+|+|++|+|++++.+++++... +++||++++. ..++.|+.+++
T Consensus 191 -------------------~~~-----~~~~~~~~i~~~Dva~a~~~~l~~~~~~-g~~~~i~~~~~~~~~~~~~~~~lf 245 (252)
T d2q46a1 191 -------------------DDE-----LLQTDTKTVPRADVAEVCIQALLFEEAK-NKAFDLGSKPEGTSTPTKDFKALF 245 (252)
T ss_dssp -------------------TTG-----GGGSSCCEEEHHHHHHHHHHHTTCGGGT-TEEEEEEECCTTTSCCCCCHHHHH
T ss_pred -------------------Ccc-----cccCCCCeEEHHHHHHHHHHHhCCcccc-CcEEEEeeCCCCCChhHHHHHHHH
Confidence 000 0112346899999999999999887654 4589998643 45677777766
Q ss_pred HHHhC
Q psy7590 296 ANAFQ 300 (358)
Q Consensus 296 ~~~~g 300 (358)
.+..+
T Consensus 246 ~~i~~ 250 (252)
T d2q46a1 246 SQVTS 250 (252)
T ss_dssp TTCCC
T ss_pred HHHHh
Confidence 65443
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.89 E-value=3.3e-23 Score=181.30 Aligned_cols=146 Identities=16% Similarity=0.171 Sum_probs=111.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 78 (358)
|||||||||||+|++|+++|+++|+. ..........+..+..|..++.+.+.. .+|+||||++... ....
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~~~~~~~~-~~d~vi~~~g~~~---~~~~ 78 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG-SIDTAFCCLGTTI---KEAG 78 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHHHGGGCCS-CCSEEEECCCCCH---HHHS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhhhhhcccc-chheeeeeeeeec---cccc
Confidence 79999999999999999999999872 111111112234455565555555543 5899999988643 2335
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH 158 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~ 158 (358)
....+.+.|+.++.+++++|++.++++|||+||.++++.. .+ .|+.+|..+|+.+++ .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~-----------------~~-~y~~~K~~~E~~l~~----~ 136 (212)
T d2a35a1 79 SEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS-----------------SI-FYNRVKGELEQALQE----Q 136 (212)
T ss_dssp SHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-----------------SS-HHHHHHHHHHHHHTT----S
T ss_pred cccccccchhhhhhhccccccccccccccccccccccccc-----------------cc-chhHHHHHHhhhccc----c
Confidence 5678999999999999999999999999999999876432 23 699999999998853 4
Q ss_pred Cc-eEEEEecCcccCCCCC
Q psy7590 159 GV-TYTSVIPCNVFGPHDN 176 (358)
Q Consensus 159 g~-~~~ilRp~~v~G~~~~ 176 (358)
++ +++|+||+.|||+...
T Consensus 137 ~~~~~~I~Rp~~v~G~~~~ 155 (212)
T d2a35a1 137 GWPQLTIARPSLLFGPREE 155 (212)
T ss_dssp CCSEEEEEECCSEESTTSC
T ss_pred ccccceeeCCcceeCCccc
Confidence 65 5999999999999764
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.84 E-value=6.3e-20 Score=172.08 Aligned_cols=224 Identities=13% Similarity=0.053 Sum_probs=155.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--------CceeeecccccCCCHHH-HHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------TWIFVSSKEADLSNLES-TQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------~~~~~~~~~~Dl~~~~~-~~~~~~~~~~d~Vih~a~ 68 (358)
.|+|||||||||+|++|+++|++.|++ +.. ....++.+.+|+.|+.+ +..++. +++++++...
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~--~~~~~~~~~~ 80 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE--GAHLAFINTT 80 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT--TCSEEEECCC
T ss_pred CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhc--CCceEEeecc
Confidence 468999999999999999999999984 211 12356778999998655 556666 5888886644
Q ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHH
Q psy7590 69 MVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLD 148 (358)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E 148 (358)
... ..++..+.+++++|.+++++++|+.||....... ...+.. .|..+|...|
T Consensus 81 ~~~-------------~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~-------------~~~~~~-~~~~~k~~~~ 133 (350)
T d1xgka_ 81 SQA-------------GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLY-------------GPWPAV-PMWAPKFTVE 133 (350)
T ss_dssp STT-------------SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGT-------------SSCCCC-TTTHHHHHHH
T ss_pred ccc-------------chhhhhhhHHHHHHHHhCCCceEEEeeccccccC-------------Ccccch-hhhhhHHHHH
Confidence 321 1256778899999999998889989987543321 222223 5778888887
Q ss_pred HHHHHHHhhcCceEEEEecCcccCCCCCCCCCcccchhHHHHHHHHhhhhcCccchhhcccCCCCCCCCCCCCccCCCcc
Q psy7590 149 VLNKAYYQQHGVTYTSVIPCNVFGPHDNYNLESSHVIPGLIRKLYDTIEKGKDQSVFESRARFPPGANSFGLDKLDLIPF 228 (358)
Q Consensus 149 ~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (358)
.++. ..+++++++|++.+++......... +.
T Consensus 134 ~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~--~~------------------------------------------- 164 (350)
T d1xgka_ 134 NYVR----QLGLPSTFVYAGIYNNNFTSLPYPL--FQ------------------------------------------- 164 (350)
T ss_dssp HHHH----TSSSCEEEEEECEEGGGCBSSSCSS--CB-------------------------------------------
T ss_pred HHHH----hhccCceeeeeceeecccccccccc--cc-------------------------------------------
Confidence 7664 4678999999998887543211100 00
Q ss_pred cCCccccCC-CceEEEcCCCCceeeeeeH-HHHHHHHHHHHHhcC-CCCCceEEccCCCcccHHHHHHHHHHHhCCCcce
Q psy7590 229 SLFPFCFTG-GDEFKVLGTGKPLRQFIYS-LDLARLFIWVLREYD-SVEPIILSVDEKDEVTIAEVAEAIANAFQFKGRI 305 (358)
Q Consensus 229 ~~~~~~~~~-g~~~~~~~~~~~~~~~i~v-~D~a~~~~~~~~~~~-~~~~~v~n~~~~~~~s~~ei~~~i~~~~g~~~~i 305 (358)
.....+ ...+..+.+++..++++++ +|+++++..++.... ...+++|++++ +.+|+.|+++.+.+++|+++++
T Consensus 165 ---~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l~~~~G~~v~~ 240 (350)
T d1xgka_ 165 ---MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTY 240 (350)
T ss_dssp ---EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHHHHHHTSCEEE
T ss_pred ---ccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHHHHHHHCCcceE
Confidence 000001 2244455567777888876 799999999997642 22344788876 6799999999999999998776
Q ss_pred eecC
Q psy7590 306 TFDT 309 (358)
Q Consensus 306 ~~~~ 309 (358)
...+
T Consensus 241 ~~vp 244 (350)
T d1xgka_ 241 VQVP 244 (350)
T ss_dssp EECS
T ss_pred EECC
Confidence 5443
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.56 E-value=3.7e-14 Score=125.50 Aligned_cols=152 Identities=14% Similarity=0.118 Sum_probs=113.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccccCCCHHHHHHHHhcc-----CCcEEEEcccccCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHLAAMVGG 72 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~a~~~~~ 72 (358)
.|++|||||++-||+++++.|.++|++ .......+..+.+|++|++++.++++.. ++|++||+|+....
T Consensus 7 gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~ 86 (237)
T d1uzma1 7 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSAD 86 (237)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeeccccc
Confidence 478999999999999999999999984 3333333445689999999988877652 69999999997442
Q ss_pred c---cccccchhhHHHHHHHHHHHHHHHH----HhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHH
Q psy7590 73 L---FHNMSHNLDFFRVNMKINDNVLDTS----YKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKR 145 (358)
Q Consensus 73 ~---~~~~~~~~~~~~~nv~~~~~ll~aa----~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~ 145 (358)
. ..+.++....+++|+.++..+.+++ ++.+-.++|++||...... .+....|+.+|.
T Consensus 87 ~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~----------------~~~~~~Y~asKa 150 (237)
T d1uzma1 87 AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG----------------IGNQANYAASKA 150 (237)
T ss_dssp ----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------------------CCHHHHHHHH
T ss_pred ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccC----------------CcccHHHHHHHH
Confidence 1 1223455778999999987776655 4455669999999865321 122237999999
Q ss_pred HHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 146 MLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 146 ~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
..+.+.+.++.+ .|+.+..|.|+.+.
T Consensus 151 al~~lt~~lA~e~~~~gIrVN~I~PG~v~ 179 (237)
T d1uzma1 151 GVIGMARSIARELSKANVTANVVAPGYID 179 (237)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHhhhhcCCceeeeeeeCcCC
Confidence 999888887665 48999999998875
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.54 E-value=9.7e-14 Score=124.44 Aligned_cols=157 Identities=20% Similarity=0.201 Sum_probs=117.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CCC-C------------ceeeecccccCCCHHHHHHHHhcc---
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-T------------WIFVSSKEADLSNLESTQQLFSKY--- 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-~------------~~~~~~~~~Dl~~~~~~~~~~~~~--- 58 (358)
|++.|++|||||++-||+++++.|+++|++ ... . ...+..+.+|++|++++.++++..
T Consensus 1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 788899999999999999999999999984 110 0 112345689999999998888652
Q ss_pred --CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCcccccc
Q psy7590 59 --KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVH 129 (358)
Q Consensus 59 --~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~ 129 (358)
++|++||+||...... .+.++....+++|+.++..+.+++. +++-.++|++||......
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~------------ 148 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA------------ 148 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec------------
Confidence 6999999999754211 2234556789999999888777764 344458999999865321
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 130 NGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 130 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+.+..+.+ .|+.+..|.|+.+--+
T Consensus 149 ----~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 191 (260)
T d1x1ta1 149 ----SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred ----cCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCCh
Confidence 122337999999999988888775 4899999999987544
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.53 E-value=3.1e-14 Score=126.86 Aligned_cols=154 Identities=18% Similarity=0.146 Sum_probs=115.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc-----eeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW-----IFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
=+.|++|||||++-||+++++.|.++|++ ..... .....+.+|++|+++++++++.. ++|++||
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn 82 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 82 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 35689999999999999999999999984 11111 12234689999999988877652 7999999
Q ss_pred cccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 66 LAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 66 ~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+||...+.. .+.++....+++|+.++..+.+++.. ++-.++|++||...+. +.|...
T Consensus 83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~----------------~~~~~~ 146 (248)
T d2d1ya1 83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF----------------AEQENA 146 (248)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------BCTTBH
T ss_pred eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccc----------------cccccc
Confidence 999754211 12234567899999999988888854 3445899999986542 112233
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
.|+.+|...+.+.+.++.+ +|+.+..|-|+.+-
T Consensus 147 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~ 182 (248)
T d2d1ya1 147 AYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIA 182 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence 7999999999888887665 48999999998764
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.52 E-value=3.8e-13 Score=119.23 Aligned_cols=154 Identities=16% Similarity=0.169 Sum_probs=113.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------CceeeecccccCCCHHHHHHHHhcc-----CCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------TWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih~ 66 (358)
.|++|||||++-||.++++.|.++|++ ... .......+.+|++|++++.++++.. ++|++||+
T Consensus 5 gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnn 84 (242)
T d1ulsa_ 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVHY 84 (242)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEEC
Confidence 568999999999999999999999984 100 0112344589999999998887653 69999999
Q ss_pred ccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 67 AAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 67 a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+..... ..+.++....+++|+.++..+.+++... +-.+++.+||....+. |....
T Consensus 85 AG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~-----------------~~~~~ 147 (242)
T d1ulsa_ 85 AGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-----------------LGQAN 147 (242)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-----------------TTCHH
T ss_pred CcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC-----------------CCCcc
Confidence 9975421 1223455779999999999998887653 3446777676543221 22237
Q ss_pred hHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 140 YSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
|+.+|...+.+.+.++.++ |+++..|.|+.+--+-
T Consensus 148 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~ 185 (242)
T d1ulsa_ 148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChh
Confidence 9999999998888876653 8999999999886543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.51 E-value=2.7e-13 Score=120.30 Aligned_cols=154 Identities=17% Similarity=0.119 Sum_probs=114.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC--------CceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--------TWIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|++|||||++-||+++++.|+++|++ ... -...+..+.+|++|++++.++++.. ++|++|
T Consensus 6 gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idili 85 (244)
T d1nffa_ 6 GKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLV 85 (244)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEEE
Confidence 578999999999999999999999984 100 0112345689999999988877642 699999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+|+...... .+.++....+++|+.++..+.+++.. ++-.++|++||...+.. .|..
T Consensus 86 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~----------------~~~~ 149 (244)
T d1nffa_ 86 NNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG----------------TVAC 149 (244)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------CTTB
T ss_pred ECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc----------------cccc
Confidence 9999754211 12344567899999999988886643 34458999999865421 1222
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|+.+|...+.+.+.++.+ +|+.+..|-|+.+-.+
T Consensus 150 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 188 (244)
T d1nffa_ 150 HGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP 188 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSG
T ss_pred cchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccCh
Confidence 37999999999998888765 4899999999877533
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.50 E-value=6.8e-13 Score=118.72 Aligned_cols=154 Identities=18% Similarity=0.192 Sum_probs=114.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CC-------------CCceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DD-------------ETWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~-------------~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
+.|++|||||++-||+++++.|.++|.+ .. .....+..+.+|++|++++.++++..
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999983 00 01112334589999999998887652
Q ss_pred CCcEEEEcccccCC--cc--ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 KPTHVIHLAAMVGG--LF--HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 ~~d~Vih~a~~~~~--~~--~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|++||+||.... +. .+.++....+++|+.++..+.+++.. .+-.++|++||...+-
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~-------------- 148 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR-------------- 148 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--------------
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhcc--------------
Confidence 69999999996432 11 13345567999999999999887743 3455899999986531
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
..|....|+.+|...+.+.+.++.+ +|+++..|-|+.+..
T Consensus 149 --~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T 191 (258)
T d1iy8a_ 149 --GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWT 191 (258)
T ss_dssp --BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccC
Confidence 1222338999999999888887665 489999999988753
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.50 E-value=6.8e-13 Score=117.95 Aligned_cols=155 Identities=15% Similarity=0.142 Sum_probs=114.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC---------ceeeecccccCCCHHHHHHHHhc-----cCCcE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET---------WIFVSSKEADLSNLESTQQLFSK-----YKPTH 62 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~ 62 (358)
+.|.+|||||++-||+++++.|.++|++ .... ...+..+.+|++|++++.++++. .++|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4578999999999999999999999984 1110 11234568999999999887754 26999
Q ss_pred EEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 63 VIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 63 Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
+||+|+..... ..+.++....+++|+.++..+.+++.. ++-.++|++||..... +.|
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~----------------~~~ 147 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL----------------KIE 147 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGS----------------CCS
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcc----------------cCc
Confidence 99999975421 123345678999999999988887743 4445899999986532 122
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...+.+.+.++.+ .|+++..|.|+.+-.+
T Consensus 148 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 188 (247)
T d2ew8a1 148 AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTA 188 (247)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---
T ss_pred ccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 2337999999999888888765 4899999999877544
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.50 E-value=9.3e-13 Score=117.33 Aligned_cols=156 Identities=16% Similarity=0.175 Sum_probs=115.6
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------C-----------CCCceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------D-----------DETWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~-----------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+.|.+|||||++-||+++++.|.++|++ . ......+..+.+|++|++++.++++.. ++
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 88 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 88 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence 3578999999999999999999999984 0 001113445689999999998888652 79
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
|++||+|+...... ...++....+++|+.++..+.+++. +++-.++|++||...+..
T Consensus 89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~---------------- 152 (251)
T d2c07a1 89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG---------------- 152 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----------------
T ss_pred eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC----------------
Confidence 99999999754321 1224556789999999988887764 344558999999855321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+..+.+ .|+++..|.|+.+-.+.
T Consensus 153 ~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~ 196 (251)
T d2c07a1 153 NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 196 (251)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccc
Confidence 122237999999999998888765 48999999999886543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.49 E-value=5.5e-13 Score=119.41 Aligned_cols=155 Identities=18% Similarity=0.170 Sum_probs=108.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhc----c--C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSK----Y--K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~----~--~ 59 (358)
+.|++|||||++-||.++++.|+++|.+ .. .....+..+.+|+++++++.++++. + .
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999999999999999999999984 00 0111344558999999988877643 2 4
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+|+..... ..+.++....+++|+.++..+.+++.. .+-.++|++||....-.
T Consensus 87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~--------------- 151 (259)
T d1xq1a_ 87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS--------------- 151 (259)
T ss_dssp CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------------------
T ss_pred cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc---------------
Confidence 89999999974421 123345667899999999888887643 44558999999854321
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+.+.++.+ .|+.+..|-|+.+--+
T Consensus 152 -~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~ 194 (259)
T d1xq1a_ 152 -ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATP 194 (259)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--
T ss_pred -ccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCH
Confidence 112227999999999888887665 4899999999877544
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.49 E-value=8.7e-13 Score=117.78 Aligned_cols=150 Identities=17% Similarity=0.126 Sum_probs=110.5
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
.+|||||++-||+++++.|.++|.+ .. .....+..+.+|++|++++.++++.. ++|++
T Consensus 3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI 82 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 3599999999999999999999983 00 00112344589999999998887652 69999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
||+||...... .+.++....+++|+.++..+.+++.. .+ ..++|++||...+. +.|
T Consensus 83 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~----------------~~~ 146 (255)
T d1gega_ 83 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV----------------GNP 146 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------------CCT
T ss_pred EecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc----------------cCc
Confidence 99999744211 12344567899999999998887643 33 34799999886532 222
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
....|+.+|...+.+.+.++.+ .|+++..|.|+.+-
T Consensus 147 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~ 185 (255)
T d1gega_ 147 ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVK 185 (255)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred ccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCccc
Confidence 3337999999999888887765 48999999998774
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.49 E-value=2e-13 Score=121.19 Aligned_cols=153 Identities=16% Similarity=0.163 Sum_probs=114.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHV 63 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~V 63 (358)
+.|+++||||++-||+++++.|.++|++ .... ......+.+|+++++++.++++.. ++|++
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL 82 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence 3578999999999999999999999984 1100 112344589999999988877652 69999
Q ss_pred EEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 64 IHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 64 ih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
||+|+...... ...++....+++|+.++..+.+++.. ++-.++|++||...+.. .|.
T Consensus 83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~----------------~~~ 146 (243)
T d1q7ba_ 83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMG----------------NGG 146 (243)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC----------------CTT
T ss_pred hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCC----------------CCC
Confidence 99998754221 12345567899999999998888843 34458999999865421 122
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
...|+.+|...+.+.+..+.+ +|+.+..+.|+.+-
T Consensus 147 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~ 184 (243)
T d1q7ba_ 147 QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIE 184 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEe
Confidence 237999999999988888765 48999999998774
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.49 E-value=4.8e-13 Score=119.43 Aligned_cols=152 Identities=17% Similarity=0.140 Sum_probs=115.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC--------CCceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD--------ETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~--------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|++|||||++-||.++++.|+++|.+ .. .-...+..+.+|++++++++++++.. ++|++|
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 84 (254)
T d1hdca_ 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLV 84 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEE
Confidence 578999999999999999999999984 10 00122455689999999998888652 799999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCC
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSN 137 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~ 137 (358)
|+|+...... ...++....+++|+.++..+.+++.. ++-.++|++||...+. ..|..
T Consensus 85 nnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~----------------~~~~~ 148 (254)
T d1hdca_ 85 NNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM----------------GLALT 148 (254)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----------------CCTTC
T ss_pred ecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcc----------------cccch
Confidence 9999754211 22234567899999999998887753 4455999999986532 11222
Q ss_pred cchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 138 FGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 138 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
..|+.+|...+.+.+.++.+ .|+++..|-|+.+.
T Consensus 149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~ 185 (254)
T d1hdca_ 149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTY 185 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCccc
Confidence 38999999999998888765 48999999998774
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=7.3e-14 Score=124.87 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=110.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-------------------CCCCceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-------------------DDETWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
+.|++|||||++-||+++++.|.++|.+ .......+..+.+|++++++++++++..
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999983 1111223445689999999998887542
Q ss_pred CCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc----C---CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 59 KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ----G---VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~---v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
++|++||+|+... ..+....+++|+.++..+..++... + -.++|++||...+-
T Consensus 82 ~iDilVnnAg~~~-----~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~--------------- 141 (254)
T d2gdza1 82 RLDILVNNAGVNN-----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--------------- 141 (254)
T ss_dssp CCCEEEECCCCCC-----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS---------------
T ss_pred CcCeecccccccc-----cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhcc---------------
Confidence 6999999999864 3567788999998888777776542 2 23699999986532
Q ss_pred CCCCCCcchHHHHHHHHHHHHH--HH---hhcCceEEEEecCccc
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKA--YY---QQHGVTYTSVIPCNVF 171 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~--~~---~~~g~~~~ilRp~~v~ 171 (358)
+.|....|+.+|...+.+.+. .+ ...|+++..|.|+.|-
T Consensus 142 -~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~ 185 (254)
T d2gdza1 142 -PVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVN 185 (254)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBS
T ss_pred -CCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCC
Confidence 122233799999999888764 22 2458999999998774
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.48 E-value=3.3e-12 Score=114.15 Aligned_cols=156 Identities=21% Similarity=0.212 Sum_probs=114.9
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhc----c--C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSK----Y--K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~----~--~ 59 (358)
+.|+||||||++-||+++++.|+++|++ .. .....+..+.+|++++++++++++. . .
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 4579999999999999999999999984 10 0112233458999999988776642 2 4
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+|+...... .+.++....+++|+.++..+.+++.. .+..++|++||......
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~--------------- 149 (258)
T d1ae1a_ 85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA--------------- 149 (258)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC---------------
T ss_pred cEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc---------------
Confidence 899999999754311 13345677999999999988887753 34569999999866422
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+.++.++ |+.+..|.|+.+..+.
T Consensus 150 -~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~ 193 (258)
T d1ae1a_ 150 -LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 193 (258)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred -cccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcc
Confidence 1223389999999999988887763 7999999999887553
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.48 E-value=1.2e-12 Score=115.97 Aligned_cols=153 Identities=20% Similarity=0.169 Sum_probs=115.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------CceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------TWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~ 69 (358)
.|++|||||++-||+++++.|.++|++ ... ....+..+.+|++|+++++++++++ ++|++||+|+.
T Consensus 5 GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg~ 84 (242)
T d1cyda_ 5 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAAL 84 (242)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCcc
Confidence 578999999999999999999999984 100 1123445689999999999999875 59999999997
Q ss_pred cCCc---cccccchhhHHHHHHHHHHHHHHHHHh----c-CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 70 VGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----Q-GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 70 ~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~-~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
.... ..+.++....+++|+.++..+.+++.. . +-.++|++||...+. ..|....|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~----------------~~~~~~~Y~ 148 (242)
T d1cyda_ 85 VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----------------TFPNLITYS 148 (242)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCTTBHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc----------------cCCcccccc
Confidence 4421 123344567899999999998886643 2 234899999986532 222233799
Q ss_pred HHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 142 HAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
.+|...+.+.+.++.+ +|+++..|-|+.+-.
T Consensus 149 asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T 182 (242)
T d1cyda_ 149 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLT 182 (242)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTT
T ss_pred chHHHHHHHHHHHHHHhCccCeecccCCCCCccC
Confidence 9999999999888765 489999999987753
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.47 E-value=8.3e-13 Score=118.20 Aligned_cols=153 Identities=18% Similarity=0.133 Sum_probs=113.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhc----c--C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSK----Y--K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~----~--~ 59 (358)
+.|++|||||++-||+++++.|.++|++ .. .....+..+.+|+++++++.++++. . +
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999999999984 10 0112344568999999988877643 2 5
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+|+...... .+.++....+++|+.++..+.+++.. .+-.++|++||.....
T Consensus 87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~---------------- 150 (259)
T d2ae2a_ 87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL---------------- 150 (259)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTS----------------
T ss_pred ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccc----------------
Confidence 899999999754211 22344567999999999888877654 3445899999985532
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
..|....|+.+|...+.+.+.++.+ .|+++..|-|+.|-
T Consensus 151 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~ 192 (259)
T d2ae2a_ 151 AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIA 192 (259)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred ccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCccc
Confidence 1222337999999999999888765 48999999998774
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.47 E-value=3.4e-12 Score=114.66 Aligned_cols=157 Identities=17% Similarity=0.168 Sum_probs=114.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CC----------CCceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DD----------ETWIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~----------~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
+.|.+|||||++-||.++++.|+++|.+ .. .....+.++.+|++|++++.++++. .++|
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 84 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 84 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence 4578999999999999999999999983 00 0011133458999999999888864 2799
Q ss_pred EEEEcccccCCcc-----ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 62 HVIHLAAMVGGLF-----HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 62 ~Vih~a~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
++||+|+...... .+.++....+++|+.++..+.+++.. ++-.++|++||...+...
T Consensus 85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~-------------- 150 (268)
T d2bgka1 85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG-------------- 150 (268)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC--------------
T ss_pred eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc--------------
Confidence 9999999643211 12234566889999999888887754 344589999887543211
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.+....|+.+|...+.+.+.++.+ .|+++..|.|+.+-.+.
T Consensus 151 -~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~ 194 (268)
T d2bgka1 151 -EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL 194 (268)
T ss_dssp -TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred -cccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChH
Confidence 111226999999999988887665 48999999999887654
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.47 E-value=4.5e-13 Score=119.70 Aligned_cols=154 Identities=12% Similarity=0.060 Sum_probs=114.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.|++|||||++-||+++++.|.++|++ .. .....+..+.+|+++++++.++++.. ++|
T Consensus 11 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iD 90 (255)
T d1fmca_ 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD 90 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999984 00 00112344589999999988877642 799
Q ss_pred EEEEcccccCCcc--ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCC
Q psy7590 62 HVIHLAAMVGGLF--HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHP 135 (358)
Q Consensus 62 ~Vih~a~~~~~~~--~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p 135 (358)
++||+|+...... .+.++....+++|+.++..+.+++.. .+-.++|++||...+.. .|
T Consensus 91 ilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~----------------~~ 154 (255)
T d1fmca_ 91 ILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK----------------NI 154 (255)
T ss_dssp EEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC----------------CT
T ss_pred EeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc----------------cc
Confidence 9999999754311 22345567899999999888877654 34447899998765321 22
Q ss_pred CCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 136 SNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 136 ~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
....|+.+|...+.+.+.++.+ +|+.+..|-|+.|-.+
T Consensus 155 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 195 (255)
T d1fmca_ 155 NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195 (255)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcCh
Confidence 2338999999999998888765 4899999999887543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.47 E-value=6.7e-13 Score=118.61 Aligned_cols=154 Identities=16% Similarity=0.119 Sum_probs=113.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|++|||||++-||+++++.|+++|++ .... ...+..+.+|+++++++.++++.. ++|++|
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilV 84 (256)
T d1k2wa_ 5 GKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDILV 84 (256)
T ss_dssp TEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEE
Confidence 468999999999999999999999984 1000 012234589999999999888652 799999
Q ss_pred EcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----c-CCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 65 HLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----Q-GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 65 h~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~-~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
|+|+..... ..+.++....+++|+.++..+.+++.. . .-.++|++||...+. +.|.
T Consensus 85 nnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------------~~~~ 148 (256)
T d1k2wa_ 85 NNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR----------------GEAL 148 (256)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----------------CCTT
T ss_pred eecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc----------------cccc
Confidence 999974421 112344567899999999888876543 2 234899999986532 1222
Q ss_pred CcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|+.+|...+.+.+.++.+ +|+.+..|.|+.+-.+
T Consensus 149 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~ 188 (256)
T d1k2wa_ 149 VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGE 188 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCT
T ss_pred ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCch
Confidence 338999999999888887765 4899999999877544
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.46 E-value=1.2e-12 Score=116.58 Aligned_cols=156 Identities=19% Similarity=0.171 Sum_probs=114.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
+.|++|||||++-||+++++.|+++|++ ... ....+..+.+|+++++++.++++.. +
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999984 100 0112344589999999988887652 6
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+||...... .+.++....+++|+.++..+.+++.. ++-.++|++||..... .
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~---------------~ 148 (251)
T d1vl8a_ 84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEE---------------V 148 (251)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTC---------------C
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcc---------------c
Confidence 999999999743211 23345567899999999988888754 3445899998864321 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..+....|+.+|...+.+.+.++.+ +|+++..|.|+.+-.+
T Consensus 149 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~ 192 (251)
T d1vl8a_ 149 TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTK 192 (251)
T ss_dssp CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCST
T ss_pred cCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCH
Confidence 1122227999999999988888765 4899999999988544
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=6.6e-13 Score=117.83 Aligned_cols=154 Identities=19% Similarity=0.173 Sum_probs=115.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-------CceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-------TWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~ 69 (358)
.|++|||||++-||+++++.|.++|++ ... ....+..+.+|++|+++++++++.. ++|++||+|+.
T Consensus 7 GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg~ 86 (244)
T d1pr9a_ 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAV 86 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecccc
Confidence 469999999999999999999999984 100 0112345689999999999999875 59999999997
Q ss_pred cCCc---cccccchhhHHHHHHHHHHHHHHHHHh-----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 70 VGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK-----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 70 ~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~-----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
.... ..+.++....+++|+.++..+.+++.. .+-.++|++||..... ..|....|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~----------------~~~~~~~Y~ 150 (244)
T d1pr9a_ 87 ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR----------------AVTNHSVYC 150 (244)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS----------------CCTTBHHHH
T ss_pred ccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccc----------------cccchhhhh
Confidence 5421 122345567899999998888776643 2345899999986532 122233799
Q ss_pred HHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 142 HAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+|...+.+.+..+.+ .|+++..|.|+.|.-+
T Consensus 151 asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~ 185 (244)
T d1pr9a_ 151 STKGALDMLTKVMALELGPHKIRVNAVNPTVVMTS 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSH
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcCh
Confidence 9999999998888765 4899999999887543
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.46 E-value=7.4e-13 Score=117.97 Aligned_cols=153 Identities=19% Similarity=0.155 Sum_probs=112.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC----------CCceeeecccccCCCHHHHHHHHhcc-----CCcE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD----------ETWIFVSSKEADLSNLESTQQLFSKY-----KPTH 62 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~----------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~ 62 (358)
.|++|||||++-||+++++.|.++|.+ .. .....+..+.+|++|++++.++++.. ++|+
T Consensus 6 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 85 (251)
T d1zk4a1 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceE
Confidence 478999999999999999999999984 00 01113445689999999988877652 6999
Q ss_pred EEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCC-EEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 63 VIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVK-KVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 63 Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~-r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+||+|+...... .+.++....+++|+.++..+.+++.. .+.. ++|++||...+- ..
T Consensus 86 LVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~----------------~~ 149 (251)
T d1zk4a1 86 LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----------------GD 149 (251)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS----------------CC
T ss_pred EEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec----------------cC
Confidence 999999754211 12234557899999999999888754 3433 789999985432 11
Q ss_pred CCCcchHHHHHHHHHHHHHHHh-----hcCceEEEEecCcccC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQ-----QHGVTYTSVIPCNVFG 172 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~-----~~g~~~~ilRp~~v~G 172 (358)
|....|+.+|...+.+.+.++. .+|+.+..|.|+.+-.
T Consensus 150 ~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T 192 (251)
T d1zk4a1 150 PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKT 192 (251)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCC
T ss_pred CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCC
Confidence 2223799999999988877654 3489999999987753
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.4e-12 Score=115.99 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=113.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-------CCceeeecccccCCCHHHHHHHHhcc-----CCcEEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-------ETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVIH 65 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vih 65 (358)
.|++|||||++-||+++++.|.++|.+ .. .......++.+|++|++++.++++.. ++|++||
T Consensus 6 GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVn 85 (250)
T d1ydea1 6 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVN 85 (250)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEe
Confidence 578999999999999999999999984 10 01112345689999999998887652 6999999
Q ss_pred cccccCCc--c--ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 66 LAAMVGGL--F--HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 66 ~a~~~~~~--~--~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
+|+..... . .+.++....+++|+.++..+.+++... +-.++|++||....-. .|...
T Consensus 86 nAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~----------------~~~~~ 149 (250)
T d1ydea1 86 NAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIG----------------QAQAV 149 (250)
T ss_dssp CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHC----------------CTTCH
T ss_pred cccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccccc----------------ccCcc
Confidence 99964321 1 223445678999999999888877542 1248999999865321 12223
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
.|+.+|...+.+.+.++.+ .|+.+..|.|+.|-
T Consensus 150 ~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~ 185 (250)
T d1ydea1 150 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIW 185 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred hhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence 7999999999988888765 48999999998774
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.45 E-value=1.3e-12 Score=117.05 Aligned_cols=154 Identities=16% Similarity=0.154 Sum_probs=113.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
.|+++||||++-||.++++.|.++|++ ... ....+..+.+|++|++++.++++.. ++
T Consensus 7 gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 86 (261)
T d1geea_ 7 GKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL 86 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999984 110 0123445689999999998887642 79
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCC-CEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGV-KKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v-~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|++||+|+...... .+.++....+++|+.++..+.+++.. ++- ..+|++||.....
T Consensus 87 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~---------------- 150 (261)
T d1geea_ 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI---------------- 150 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS----------------
T ss_pred CEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc----------------
Confidence 99999999754211 22344567899999998888777643 443 3588899885431
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
+.|....|+.+|...+.+.+..+.+. |+.+..|-|+.|--+
T Consensus 151 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~ 194 (261)
T d1geea_ 151 PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSG
T ss_pred cCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCH
Confidence 22223379999999998888876653 899999999987543
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=1.3e-12 Score=119.33 Aligned_cols=155 Identities=16% Similarity=0.123 Sum_probs=114.0
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc------C----------------CCCceeeecccccCCCHHHHHHHHhc--
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR------D----------------DETWIFVSSKEADLSNLESTQQLFSK-- 57 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~------~----------------~~~~~~~~~~~~Dl~~~~~~~~~~~~-- 57 (358)
-+.|++|||||++-||.++++.|.++|++ . ......+..+.+|++|++++.++++.
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 35678999999999999999999999983 0 01112344568999999999888764
Q ss_pred ---cCCcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc----CCCEEEEeeccceecCCCCCCCcccc
Q psy7590 58 ---YKPTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ----GVKKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 58 ---~~~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~----~v~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
.++|++||+|+..... ....++....+++|+.++..+.+++... +-.++|.+||....
T Consensus 90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~------------ 157 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA------------ 157 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT------------
T ss_pred HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc------------
Confidence 2799999999864321 1223455678999999999988887643 34467777664321
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
..|....|+.+|...+.+.+..+.+. |+.+..|.|+.|.-+
T Consensus 158 -----~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 201 (297)
T d1yxma1 158 -----GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 201 (297)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred -----cccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCc
Confidence 12223379999999999988887654 899999999988654
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.44 E-value=1.5e-12 Score=116.10 Aligned_cols=151 Identities=17% Similarity=0.167 Sum_probs=112.2
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-----------------CCCCceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-----------------DDETWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-----------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
+.|++|||||++-||.++++.|+++|.+ ...+ ...+.+|++++++++++++.. ++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~---~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 81 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER---SMFVRHDVSSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTT---EEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCC---eEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999999999984 0112 234589999999988887652 69
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|++||+|+..... ..+.++....+++|+.++..+.+++... +-.++|++||...+- +.
T Consensus 82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~----------------~~ 145 (253)
T d1hxha_ 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL----------------PI 145 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS----------------CC
T ss_pred CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhc----------------Cc
Confidence 9999999975421 1223445679999999988888877542 124899999986532 12
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh-----cCceEEEEecCcccC
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ-----HGVTYTSVIPCNVFG 172 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~-----~g~~~~ilRp~~v~G 172 (358)
|....|+.+|...+.+.+..+.+ +++++..|-|+.+..
T Consensus 146 ~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T 188 (253)
T d1hxha_ 146 EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYT 188 (253)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECC
T ss_pred cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcC
Confidence 22337999999999888776654 358999999988753
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.43 E-value=3e-12 Score=114.29 Aligned_cols=152 Identities=22% Similarity=0.190 Sum_probs=114.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.|.+|||||++-||+++++.|.++|++ .. .....+..+.+|++|++++.++++.. ++|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 356799999999999999999999984 00 00112445689999999998887642 699
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh------cCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK------QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~------~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
++||+||..... ..+.++....+++|+.++..+.+++.. .+..++|++||...+.
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~---------------- 145 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ---------------- 145 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTS----------------
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccc----------------
Confidence 999999975421 123345568999999999999998864 2345899998885532
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCccc
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVF 171 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~ 171 (358)
..|....|+.+|...+.+.+.++.+. |+++..|-|+.+-
T Consensus 146 ~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~ 187 (257)
T d2rhca1 146 GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVE 187 (257)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBC
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence 12223379999999999998887764 7999999998774
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.42 E-value=1.1e-12 Score=117.15 Aligned_cols=155 Identities=18% Similarity=0.012 Sum_probs=109.6
Q ss_pred CCEEEEEcCCC--hhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 4 EKIILVTGGTG--LVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 4 ~~~VlItGatG--~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
.|++|||||+| -||+++++.|.++|.+ .... ......+.+|++|+++++++++. .++
T Consensus 8 gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (256)
T d1ulua_ 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGL 87 (256)
T ss_dssp TCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCc
Confidence 46899999997 5999999999999984 1000 00123458999999999888754 269
Q ss_pred cEEEEcccccCCc-------cccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 61 THVIHLAAMVGGL-------FHNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 61 d~Vih~a~~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
|++||+|+..... .....+....+++|+.++..+.+++...- -.++|++||.....
T Consensus 88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~--------------- 152 (256)
T d1ulua_ 88 DYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK--------------- 152 (256)
T ss_dssp EEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS---------------
T ss_pred eEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcC---------------
Confidence 9999999864210 01122344578999999999988876542 23799999886532
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
..|....|+.+|...+.+.+.++.+ +|+++..+.|+.+.-+.
T Consensus 153 -~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~ 197 (256)
T d1ulua_ 153 -VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (256)
T ss_dssp -BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecc
Confidence 1222337999999999998888775 48999999999876553
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.42 E-value=4.5e-12 Score=113.36 Aligned_cols=154 Identities=18% Similarity=0.170 Sum_probs=115.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C-----------CCCceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D-----------DETWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~-----------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
.|++|||||++-||+++++.|.++|.+ . ......+..+.+|++|++++.++++.. ++|
T Consensus 5 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 84 (260)
T d1zema1 5 GKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKID 84 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 578999999999999999999999983 0 001112345589999999988887652 799
Q ss_pred EEEEcccccCCc--c--ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGL--F--HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~--~--~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+|+..... . .+.++....+++|+.++..+.+++.. .+-.++|++||...+..
T Consensus 85 ilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~---------------- 148 (260)
T d1zema1 85 FLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG---------------- 148 (260)
T ss_dssp EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC----------------
T ss_pred eehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC----------------
Confidence 999999964321 1 23345667899999999988888754 34458999999865421
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+.+.++.+. |+.+..|-|+.|--+
T Consensus 149 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 149 PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 1223379999999999888887654 799999999887543
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.41 E-value=1.5e-12 Score=115.47 Aligned_cols=151 Identities=14% Similarity=0.087 Sum_probs=113.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC------------CceeeecccccCCCHHHHHHHHhcc-----CCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE------------TWIFVSSKEADLSNLESTQQLFSKY-----KPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~------------~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d 61 (358)
+-||||||++-||+++++.|+++|++ ... ....+..+.+|++|++++.++++.. ++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35899999999999999999999984 000 0113345689999999998887642 699
Q ss_pred EEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++||+|+..... ..+.++....+++|+.++..+.+++.. ++-.++|++||...+-. .
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~----------------~ 145 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIG----------------N 145 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC----------------C
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCC----------------C
Confidence 999999975421 123345567899999999888887754 34459999999865321 1
Q ss_pred CCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCccc
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVF 171 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~ 171 (358)
|....|+.+|...+.+.+.++.++ |+++..|.|+.+-
T Consensus 146 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~ 185 (244)
T d1edoa_ 146 IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIA 185 (244)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceec
Confidence 222379999999999988887764 8999999998774
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.41 E-value=9e-12 Score=111.59 Aligned_cols=154 Identities=18% Similarity=0.170 Sum_probs=108.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc--------------------CCCCceeeecccccCCCHHHHHHHHhcc-----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR--------------------DDETWIFVSSKEADLSNLESTQQLFSKY----- 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~--------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----- 58 (358)
.|.+|||||++-||+++++.|+++|.+ .......+..+.+|+++++++.++++..
T Consensus 5 gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 84 (264)
T d1spxa_ 5 EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFG 84 (264)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 578999999999999999999999983 1111223556689999999998887652
Q ss_pred CCcEEEEcccccCCcc-------ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeecc-ceecCCCCCCCcccc
Q psy7590 59 KPTHVIHLAAMVGGLF-------HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLST-CIFPDKTTYPIDETM 127 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~-------~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~-~vy~~~~~~~~~E~~ 127 (358)
++|++||+|+...+.. .+.++....+++|+.++..+.+++... +-.++|.++|. +.+
T Consensus 85 ~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~------------ 152 (264)
T d1spxa_ 85 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL------------ 152 (264)
T ss_dssp CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS------------
T ss_pred CCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc------------
Confidence 7999999998642110 122345678899999998888877542 12356655554 322
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
...|....|+.+|...+.+.+.++.+ .|+++..|.||.|--+
T Consensus 153 ----~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~ 197 (264)
T d1spxa_ 153 ----HATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG 197 (264)
T ss_dssp ----SCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred ----ccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 12222337999999999888887765 4899999999988544
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.41 E-value=9.6e-12 Score=112.04 Aligned_cols=155 Identities=17% Similarity=0.141 Sum_probs=112.5
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc--------------------CCCCceeeecccccCCCHHHHHHHHhcc----
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR--------------------DDETWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~--------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
+.|+++||||++-||+++++.|.++|.+ .......+..+.+|+++++++.++++..
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999983 1111223455689999999988877642
Q ss_pred -CCcEEEEcccccCCc--cc---cccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccc
Q psy7590 59 -KPTHVIHLAAMVGGL--FH---NMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~--~~---~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
++|++||+|+..... .. ..+.....+++|+.++..+.+++.. .+-.+++++||.+...
T Consensus 83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~------------ 150 (274)
T d1xhla_ 83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ------------ 150 (274)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSS------------
T ss_pred CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccc------------
Confidence 699999999863211 11 1233567889999999988887754 3445788777764321
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..|....|+.+|...+.+.+..+.+ .|+++..|.|+.|--+
T Consensus 151 ----~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 194 (274)
T d1xhla_ 151 ----AHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 194 (274)
T ss_dssp ----CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred ----cCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence 1122237999999999888777665 4899999999988543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.40 E-value=7.5e-12 Score=110.56 Aligned_cols=151 Identities=16% Similarity=0.093 Sum_probs=111.7
Q ss_pred EEEEcCCChhHHHHHHHHHHcccc-------------C-----------CCCceeeecccccCCCHHHHHHHHhcc----
Q psy7590 7 ILVTGGTGLVGKAIEKIVKEEEKR-------------D-----------DETWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 7 VlItGatG~lG~~l~~~L~~~g~~-------------~-----------~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
||||||++-||+++++.|.++|++ . ......+..+.+|++|++++.++++..
T Consensus 4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (240)
T d2bd0a1 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERY 83 (240)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 799999999999999999999863 0 001123345689999999988877642
Q ss_pred -CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccC
Q psy7590 59 -KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
++|++||+|+...... .+.++....+++|+.++..+.+++.. ++-.++|++||...+..
T Consensus 84 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~------------- 150 (240)
T d2bd0a1 84 GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA------------- 150 (240)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-------------
T ss_pred CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC-------------
Confidence 6999999999744211 22345567999999999888877754 34458999999865421
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+.+.++.+ .|+.+..+.|+.+--+
T Consensus 151 ---~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~ 193 (240)
T d2bd0a1 151 ---FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTP 193 (240)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCST
T ss_pred ---CCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCc
Confidence 222337999999988888877665 4899999999887533
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.40 E-value=5.5e-12 Score=112.39 Aligned_cols=149 Identities=15% Similarity=0.101 Sum_probs=112.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCC-CHHHHHHHHhc-----cC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLS-NLESTQQLFSK-----YK 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~-~~~~~~~~~~~-----~~ 59 (358)
.|+||||||++-||..++++|+++|.+ ...+ ...+.++.+|++ +.+++.++++. .+
T Consensus 5 gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~ 84 (254)
T d1sbya1 5 NKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT 84 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999973 1111 124455688997 55566665543 26
Q ss_pred CcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhc-------CCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQ-------GVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~-------~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+|+... .+..+..+++|+.++..+..++... ...++|++||...+..
T Consensus 85 iDilvnnAG~~~-----~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~--------------- 144 (254)
T d1sbya1 85 VDILINGAGILD-----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA--------------- 144 (254)
T ss_dssp CCEEEECCCCCC-----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC---------------
T ss_pred CCEEEeCCCCCC-----HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC---------------
Confidence 999999999753 4677889999999999988877652 1247999999865421
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|.....+.+.++.. .|+.+..|-|+.|..+
T Consensus 145 -~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 145 -IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp -CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 122237999999999888887765 3899999999988643
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.39 E-value=8.4e-12 Score=112.32 Aligned_cols=154 Identities=17% Similarity=0.171 Sum_probs=108.7
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc--------------------CCCCceeeecccccCCCHHHHHHHHhcc----
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR--------------------DDETWIFVSSKEADLSNLESTQQLFSKY---- 58 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~--------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---- 58 (358)
+.|++|||||++-||+++++.|.++|.+ .......+..+.+|+++++++.++++..
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999983 1111223455689999999998877642
Q ss_pred -CCcEEEEcccccCCccc-------cccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeec-cceecCCCCCCCccc
Q psy7590 59 -KPTHVIHLAAMVGGLFH-------NMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLS-TCIFPDKTTYPIDET 126 (358)
Q Consensus 59 -~~d~Vih~a~~~~~~~~-------~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS-~~vy~~~~~~~~~E~ 126 (358)
++|++||+|+...+... ..+.....+++|+.++..+.+++... +-..+|.++| .+..
T Consensus 84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~----------- 152 (272)
T d1xkqa_ 84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP----------- 152 (272)
T ss_dssp SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS-----------
T ss_pred CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccc-----------
Confidence 69999999997542111 11124567889999998888877542 1224554544 4322
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
...|....|+.+|...+.+.+.++.+ +|+++..|-|+.|--
T Consensus 153 -----~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T 196 (272)
T d1xkqa_ 153 -----QAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVET 196 (272)
T ss_dssp -----SCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCS
T ss_pred -----cCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcc
Confidence 12222337999999999888888765 489999999987743
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.38 E-value=3e-12 Score=113.24 Aligned_cols=152 Identities=18% Similarity=0.132 Sum_probs=110.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC--------CCceeeecccccCCCHHHHHHHHhcc-----CCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD--------ETWIFVSSKEADLSNLESTQQLFSKY-----KPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~--------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~Vi 64 (358)
.|++|||||++-||+++++.|.++|++ .. .....+..+.+|+++++++.++++.. ++|++|
T Consensus 5 gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLi 84 (241)
T d2a4ka1 5 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVA 84 (241)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEec
Confidence 578999999999999999999999984 00 00112234589999999998877653 699999
Q ss_pred EcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcc
Q psy7590 65 HLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFG 139 (358)
Q Consensus 65 h~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~ 139 (358)
|+|+...... .+.+.....+++|+.++..+.+++...- -+.++.+||.+.. ..|....
T Consensus 85 nnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-----------------~~~~~~~ 147 (241)
T d2a4ka1 85 HFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-----------------GAFGLAH 147 (241)
T ss_dssp EGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-----------------CHHHHHH
T ss_pred cccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-----------------cccCccc
Confidence 9998743211 1223446789999999999999987653 2345544444321 1122237
Q ss_pred hHHHHHHHHHHHHHHHhhc---CceEEEEecCcccC
Q psy7590 140 YSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFG 172 (358)
Q Consensus 140 Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G 172 (358)
|+.+|...|.+.+..+.++ |+.+..+.||.+-.
T Consensus 148 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T 183 (241)
T d2a4ka1 148 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQT 183 (241)
T ss_dssp HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCC
T ss_pred cchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCC
Confidence 9999999999999987775 69999999988743
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=4e-12 Score=113.54 Aligned_cols=154 Identities=21% Similarity=0.195 Sum_probs=110.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------------------CCCCceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------------------DDETWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------------------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
.|.+|||||++-||.++++.|.++|.+ .......+..+.+|+++++++.++++.. +
T Consensus 10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~ 89 (257)
T d1xg5a_ 10 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 89 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 467999999999999999999999983 0001113445589999999988877542 6
Q ss_pred CcEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHH----hcC--CCEEEEeeccceecCCCCCCCccccccC
Q psy7590 60 PTHVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSY----KQG--VKKVVSCLSTCIFPDKTTYPIDETMVHN 130 (358)
Q Consensus 60 ~d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~----~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~ 130 (358)
+|++||+|+..... ..+.+.....++.|+.+...+.+++. +.+ -.++|++||.+.+...
T Consensus 90 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~------------ 157 (257)
T d1xg5a_ 90 VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL------------ 157 (257)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC------------
T ss_pred CCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC------------
Confidence 99999999975321 12234456789999999888777663 333 3489999998643211
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHHHh-----hcCceEEEEecCccc
Q psy7590 131 GPPHPSNFGYSHAKRMLDVLNKAYYQ-----QHGVTYTSVIPCNVF 171 (358)
Q Consensus 131 ~~~~p~~~~Y~~sK~~~E~~~~~~~~-----~~g~~~~ilRp~~v~ 171 (358)
+.+....|+.+|...+.+.+.++. ..++.+..+-|+.+-
T Consensus 158 --p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~ 201 (257)
T d1xg5a_ 158 --PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVE 201 (257)
T ss_dssp --SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBC
T ss_pred --CCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCC
Confidence 112222699999999999887764 347999999997653
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.36 E-value=2.2e-12 Score=113.68 Aligned_cols=153 Identities=16% Similarity=0.118 Sum_probs=106.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCC--CceeeecccccCCCHHHHHHHHhcc-CCcEEEEcccccCCc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDE--TWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMVGGL 73 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~~~~ 73 (358)
+.|++|||||++-||+++++.|.++|++ ... .....+++.+|+++. +..++++. ++|++||+|+.....
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~--~~~~~~~~g~iD~lVnnAG~~~~~ 80 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKD--LDLLFEKVKEVDILVLNAGGPKAG 80 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTC--HHHHHHHSCCCSEEEECCCCCCCB
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHH--HHHHHHHhCCCcEEEecccccCCc
Confidence 4579999999999999999999999984 110 111223457888763 34444433 599999999964321
Q ss_pred c---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHH
Q psy7590 74 F---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRM 146 (358)
Q Consensus 74 ~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~ 146 (358)
. .+.++....+++|+.++..+.+++. +.+-.++|++||...... .+....|+.+|..
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~----------------~~~~~~Y~asKaa 144 (234)
T d1o5ia_ 81 FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP----------------IENLYTSNSARMA 144 (234)
T ss_dssp CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----------------CTTBHHHHHHHHH
T ss_pred chhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccccc----------------ccccccchhHHHH
Confidence 1 1233456678899998877777664 344558999998755321 1223379999999
Q ss_pred HHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 147 LDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 147 ~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+.+.+.++.+ +|+++..|.|+.+-.+
T Consensus 145 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~ 174 (234)
T d1o5ia_ 145 LTGFLKTLSFEVAPYGITVNCVAPGWTETE 174 (234)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred HHHHHHHHHHHhcccCeEEeecccCccchh
Confidence 99888877665 3899999999877544
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.36 E-value=4e-12 Score=113.44 Aligned_cols=153 Identities=21% Similarity=0.171 Sum_probs=115.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-------C---CC-----------CceeeecccccCCCHHHHHHHHhcc----C
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-------D---DE-----------TWIFVSSKEADLSNLESTQQLFSKY----K 59 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-------~---~~-----------~~~~~~~~~~Dl~~~~~~~~~~~~~----~ 59 (358)
.+||||||+|-||.+++++|.++|.+ . .. ....+.++.+|++|++++.++++.. +
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~ 89 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP 89 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence 48999999999999999999999963 1 00 1123566789999999999888653 5
Q ss_pred CcEEEEcccccCCcccc---ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccceecCCCCCCCccccccCCCCCCC
Q psy7590 60 PTHVIHLAAMVGGLFHN---MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPS 136 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~~~---~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~ 136 (358)
+|.|||+++........ .......+.+|+.++.++.++....+..++|++||....-.. +.
T Consensus 90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~----------------~~ 153 (259)
T d2fr1a1 90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA----------------PG 153 (259)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC----------------TT
T ss_pred ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCC----------------cc
Confidence 89999999975432111 123345788999999999999888888899999999543211 12
Q ss_pred CcchHHHHHHHHHHHHHHHhhcCceEEEEecCcccCCC
Q psy7590 137 NFGYSHAKRMLDVLNKAYYQQHGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 137 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~ 174 (358)
...|+.+|...+.+.++... .|+++++|.|+.+.+++
T Consensus 154 ~~~YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g 190 (259)
T d2fr1a1 154 LGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSG 190 (259)
T ss_dssp CTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC---
T ss_pred cHHHHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCc
Confidence 22699999999998887755 49999999999887654
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=6.7e-12 Score=111.16 Aligned_cols=152 Identities=18% Similarity=0.103 Sum_probs=112.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-----------CCceeeecccccCCCHHHHHHHHhc----c-CCc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-----------ETWIFVSSKEADLSNLESTQQLFSK----Y-KPT 61 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-----------~~~~~~~~~~~Dl~~~~~~~~~~~~----~-~~d 61 (358)
.+.|+||||++-||++++++|.++|.+ .. .....+..+.+|++|++++.++++. . ++|
T Consensus 7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~id 86 (244)
T d1yb1a_ 7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVS 86 (244)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCc
Confidence 478999999999999999999999984 00 0111234558999999999887753 2 699
Q ss_pred EEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 62 HVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 62 ~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
++||+|+....... ..+.....+++|+.++..+.+++. +++-.++|++||...+. +.
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~----------------~~ 150 (244)
T d1yb1a_ 87 ILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV----------------SV 150 (244)
T ss_dssp EEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC----------------CH
T ss_pred eeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC----------------CC
Confidence 99999997543221 123345789999999988887664 44556899999986542 11
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh------cCceEEEEecCccc
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ------HGVTYTSVIPCNVF 171 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~------~g~~~~ilRp~~v~ 171 (358)
|....|+.||...+.+.+.++.+ .|+.+.++.|+.|-
T Consensus 151 ~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~ 193 (244)
T d1yb1a_ 151 PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVN 193 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCC
Confidence 22237999999999888888764 37999999998763
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.33 E-value=3.4e-11 Score=108.18 Aligned_cols=154 Identities=17% Similarity=0.142 Sum_probs=112.3
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CC------------CCceeeecccccCCCHHHHHHHHhcc-----C
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DD------------ETWIFVSSKEADLSNLESTQQLFSKY-----K 59 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~------------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~ 59 (358)
+.|++|||||++-||+++++.|+++|++ .. .....+..+.+|+++++++.+.++.. +
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 96 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 96 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 4579999999999999999999999973 10 00112344589999999998887642 6
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
+|++||+++...... .........+++|+.++..+.+++...= -.+.++++|..... .+.
T Consensus 97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~---------------~~~ 161 (272)
T d1g0oa_ 97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA---------------KAV 161 (272)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC---------------SSC
T ss_pred CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc---------------ccc
Confidence 999999999754321 2233456688999999999999998642 23677777653211 122
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
+....|+.+|...+.+.+.++.+ .|+++..|.|+.+-
T Consensus 162 ~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~ 201 (272)
T d1g0oa_ 162 PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIK 201 (272)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred cchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcC
Confidence 22336999999999998877765 48999999998774
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.33 E-value=6.7e-12 Score=112.18 Aligned_cols=161 Identities=17% Similarity=0.075 Sum_probs=111.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC------------ceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET------------WIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
.|++|||||++-||+++++.|+++|++ .... ...+..+.+|+++++++.++++. .++
T Consensus 9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (260)
T d1h5qa_ 9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI 88 (260)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999984 1111 11244568999999999888854 269
Q ss_pred cEEEEcccccCCc---cccccchhhHHHHHHHHHHHHHHHHHh----cC-CCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 61 THVIHLAAMVGGL---FHNMSHNLDFFRVNMKINDNVLDTSYK----QG-VKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 61 d~Vih~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~aa~~----~~-v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|++||+|+..... ..+.++....+++|+.++..+.+++.. .+ -.+++..||...+....... .
T Consensus 89 DilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~---------~ 159 (260)
T d1h5qa_ 89 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL---------N 159 (260)
T ss_dssp EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET---------T
T ss_pred cEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc---------c
Confidence 9999999864321 122334567889999999888776643 23 33566566654432110000 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
..+....|+.+|...+.+.+.++.+ .|+++..|.|+.+--+
T Consensus 160 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~ 203 (260)
T d1h5qa_ 160 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTD 203 (260)
T ss_dssp EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCc
Confidence 1122237999999999988887665 4899999999987533
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.32 E-value=2.4e-11 Score=109.47 Aligned_cols=153 Identities=20% Similarity=0.131 Sum_probs=109.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCC--------ceeeecccccCCCHHHHHHHHhc-----cCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDET--------WIFVSSKEADLSNLESTQQLFSK-----YKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~Vi 64 (358)
.|+||||||++-||+++++.|.++|.+ ...+ ...+..+.+|+++++++.++++. .++|++|
T Consensus 5 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilv 84 (276)
T d1bdba_ 5 GEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLI 84 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccccc
Confidence 468999999999999999999999984 1111 12234568999999988887754 2699999
Q ss_pred EcccccCCccc---c-cc----chhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 65 HLAAMVGGLFH---N-MS----HNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 65 h~a~~~~~~~~---~-~~----~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
|+|+....... . .+ .....+++|+.++..+.+++. +.+ .++|++||...+-
T Consensus 85 nnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~---------------- 147 (276)
T d1bdba_ 85 PNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFY---------------- 147 (276)
T ss_dssp CCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTS----------------
T ss_pred ccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhcc----------------
Confidence 99996432110 1 11 245678999999888877764 333 4788888874421
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhhc--CceEEEEecCcccCC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQH--GVTYTSVIPCNVFGP 173 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~ 173 (358)
+.|....|+.+|...+.+.+..+.+. ++++..|.|+.|--+
T Consensus 148 ~~~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~ 190 (276)
T d1bdba_ 148 PNGGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSD 190 (276)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSC
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecC
Confidence 11223379999999998888877664 489999999987544
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=1.3e-11 Score=109.31 Aligned_cols=155 Identities=15% Similarity=0.132 Sum_probs=113.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------C------CCCceeeecccccCCCHHHHHHHHhcc-CCcEEEEccccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------D------DETWIFVSSKEADLSNLESTQQLFSKY-KPTHVIHLAAMV 70 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~Vih~a~~~ 70 (358)
.|++|||||++-||+++++.|+++|++ . ......+....+|+.+.+.+....+.. ++|++||+|+..
T Consensus 6 gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag~~ 85 (245)
T d2ag5a1 6 GKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGFV 85 (245)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccccc
Confidence 478999999999999999999999984 1 111223445577888888777777653 699999999975
Q ss_pred CCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHH
Q psy7590 71 GGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHA 143 (358)
Q Consensus 71 ~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~s 143 (358)
.... .+.++....+++|+.++..+.+++.. .+-.++|++||...- . .+.+....|+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~--~-------------~~~~~~~~Y~~s 150 (245)
T d2ag5a1 86 HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS--V-------------KGVVNRCVYSTT 150 (245)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT--T-------------BCCTTBHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc--c-------------CCccchhHHHHH
Confidence 5321 22345567899999999999887764 334589999886320 0 112222379999
Q ss_pred HHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 144 KRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 144 K~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
|...+.+++.++.+. |+.+..|.|+.+-.+
T Consensus 151 Kaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~ 183 (245)
T d2ag5a1 151 KAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP 183 (245)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeeceeech
Confidence 999999998887764 899999999887644
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.31 E-value=2.5e-11 Score=107.55 Aligned_cols=155 Identities=16% Similarity=0.139 Sum_probs=108.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH---cccc------CCCCc----------eeeecccccCCCHHHHHHHHhc-------
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKE---EEKR------DDETW----------IFVSSKEADLSNLESTQQLFSK------- 57 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~---~g~~------~~~~~----------~~~~~~~~Dl~~~~~~~~~~~~------- 57 (358)
||+||||||++-||.++++.|++ +|+. ...+. ..+.++.+|++|++++.++++.
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 67999999999999999999985 4552 22111 1345568999999888776652
Q ss_pred cCCcEEEEcccccCCcc-c---cccchhhHHHHHHHHHHHHHHHHHhc---------------CCCEEEEeeccceecCC
Q psy7590 58 YKPTHVIHLAAMVGGLF-H---NMSHNLDFFRVNMKINDNVLDTSYKQ---------------GVKKVVSCLSTCIFPDK 118 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~-~---~~~~~~~~~~~nv~~~~~ll~aa~~~---------------~v~r~V~~SS~~vy~~~ 118 (358)
.++|++||+|+...... . ..+.....+++|+.++..+.+++... +-.++|.+||..-.-..
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~ 161 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 161 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence 36999999999744211 1 11234568899999998888776421 23578999987432111
Q ss_pred CCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 119 TTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 119 ~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
.+.+....|+.||.....+.+.++.+ .|+.+..+-||.|-
T Consensus 162 -------------~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 162 -------------NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp -------------CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred -------------CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 22233337999999999888777654 37999999998774
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.30 E-value=5.6e-11 Score=105.98 Aligned_cols=152 Identities=18% Similarity=0.153 Sum_probs=110.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC------------CCceeeecccccCCCHHHHHHHHhc-----cCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD------------ETWIFVSSKEADLSNLESTQQLFSK-----YKP 60 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~------------~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~ 60 (358)
.|+||||||++-||.++++.|+++|++ .. .....+..+.+|++|++++.++++. .++
T Consensus 6 GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 85 (259)
T d1ja9a_ 6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGL 85 (259)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999984 00 0011234568999999988887753 269
Q ss_pred cEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeecc-ceecCCCCCCCccccccCCCCC
Q psy7590 61 THVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLST-CIFPDKTTYPIDETMVHNGPPH 134 (358)
Q Consensus 61 d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~-~vy~~~~~~~~~E~~~~~~~~~ 134 (358)
|++||+|+...... ...+.....+++|+.+...+++++...- -.+.+.++|. +.+. ..
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~----------------~~ 149 (259)
T d1ja9a_ 86 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT----------------GI 149 (259)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC----------------SC
T ss_pred cEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccccc----------------CC
Confidence 99999999754211 2234456789999999999998887642 1245555554 3321 12
Q ss_pred CCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCccc
Q psy7590 135 PSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVF 171 (358)
Q Consensus 135 p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~ 171 (358)
|....|+.+|...+.+.+.++.+ .|+.+..|.||.+-
T Consensus 150 ~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~ 189 (259)
T d1ja9a_ 150 PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK 189 (259)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCcc
Confidence 22337999999999888888775 48999999999874
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.29 E-value=1.5e-11 Score=109.70 Aligned_cols=154 Identities=19% Similarity=0.201 Sum_probs=110.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHH---cccc------CC-------------CCceeeecccccCCCHHHHHHHHhc----
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKE---EEKR------DD-------------ETWIFVSSKEADLSNLESTQQLFSK---- 57 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~---~g~~------~~-------------~~~~~~~~~~~Dl~~~~~~~~~~~~---- 57 (358)
.|.++||||++-||.+++++|.+ +|++ .. .....+..+.+|+++++++.++++.
T Consensus 6 gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~ 85 (259)
T d1oaaa_ 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVREL 85 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 45689999999999999999976 5652 00 0112345568999999998887642
Q ss_pred -----cCCcEEEEcccccCCcc------ccccchhhHHHHHHHHHHHHHHHHHhcC------CCEEEEeeccceecCCCC
Q psy7590 58 -----YKPTHVIHLAAMVGGLF------HNMSHNLDFFRVNMKINDNVLDTSYKQG------VKKVVSCLSTCIFPDKTT 120 (358)
Q Consensus 58 -----~~~d~Vih~a~~~~~~~------~~~~~~~~~~~~nv~~~~~ll~aa~~~~------v~r~V~~SS~~vy~~~~~ 120 (358)
...|++||.|+...+.. .+.+.....+++|+.++..+.+++...= ..++|++||...+.
T Consensus 86 ~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~---- 161 (259)
T d1oaaa_ 86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ---- 161 (259)
T ss_dssp CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS----
T ss_pred hhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC----
Confidence 24678999988643211 1112345689999999999999987641 23799999986532
Q ss_pred CCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh-cCceEEEEecCcccCC
Q psy7590 121 YPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ-HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 121 ~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~-~g~~~~ilRp~~v~G~ 173 (358)
+.|....|+.+|...+.+.+.++.+ .|+++..+.||.|-.+
T Consensus 162 ------------~~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 162 ------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp ------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred ------------CCccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 2222338999999999998888665 4799999999877543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.29 E-value=1.3e-11 Score=112.80 Aligned_cols=151 Identities=17% Similarity=0.161 Sum_probs=107.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC-----C-c-----------eeeecccccCCCHHHHHHHHhc---
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE-----T-W-----------IFVSSKEADLSNLESTQQLFSK--- 57 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~-----~-~-----------~~~~~~~~Dl~~~~~~~~~~~~--- 57 (358)
.|++|||||++-||+++++.|.++|.+ ... + . .......+|+.+.++.+++++.
T Consensus 7 gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~ 86 (302)
T d1gz6a_ 7 GRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALD 86 (302)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHH
Confidence 468999999999999999999999973 000 0 0 0011235778887766655542
Q ss_pred -c-CCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHh----cCCCEEEEeeccceecCCCCCCCccccc
Q psy7590 58 -Y-KPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYK----QGVKKVVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 58 -~-~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~----~~v~r~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
+ ++|++||+||...... .+.++....+++|+.++..+.+++.. ++-.++|++||...+-.
T Consensus 87 ~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~----------- 155 (302)
T d1gz6a_ 87 TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG----------- 155 (302)
T ss_dssp HTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-----------
T ss_pred HcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCC-----------
Confidence 2 6999999999754211 12234567899999999988888653 45559999999864321
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcc
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNV 170 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v 170 (358)
.|....|+.+|...+.+.+.++.+ +|+.+..|-|+.+
T Consensus 156 -----~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~ 195 (302)
T d1gz6a_ 156 -----NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 195 (302)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence 122237999999999988888765 4899999999865
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.29 E-value=3e-11 Score=107.12 Aligned_cols=160 Identities=14% Similarity=0.078 Sum_probs=108.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHcccc--------CC--------CCceeeecccccCCCHHHHHHHHhc-------c
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKR--------DD--------ETWIFVSSKEADLSNLESTQQLFSK-------Y 58 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~--------~~--------~~~~~~~~~~~Dl~~~~~~~~~~~~-------~ 58 (358)
|+.|+||||||++-||.+++++|+++|.. .. .....+.++.+|+++.+++.++++. .
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 44579999999999999999999999841 11 1111345568999999988777643 2
Q ss_pred CCcEEEEcccccCCcc----ccccchhhHHHHHHHHHHHHHHHHHh----c-----------CCCEEEEeeccceecCCC
Q psy7590 59 KPTHVIHLAAMVGGLF----HNMSHNLDFFRVNMKINDNVLDTSYK----Q-----------GVKKVVSCLSTCIFPDKT 119 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~aa~~----~-----------~v~r~V~~SS~~vy~~~~ 119 (358)
++|++||+||...... .+.+.....+++|+.++..+.+++.. . ...+++.+|+...+-...
T Consensus 81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 160 (250)
T d1yo6a1 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence 4899999999754211 11223456899999999888877642 1 123566666654322110
Q ss_pred CCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcc
Q psy7590 120 TYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNV 170 (358)
Q Consensus 120 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v 170 (358)
. ... ...+. ..|+.||.....+.+.++.+ .|+.+..+-||.|
T Consensus 161 ~---~~~-----~~~~~-~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v 205 (250)
T d1yo6a1 161 T---SGS-----AQFPV-LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV 205 (250)
T ss_dssp C---STT-----SSSCB-HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC
T ss_pred c---ccc-----cchhH-HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCC
Confidence 0 000 11222 26999999999988888765 4899999999866
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.27 E-value=3.1e-11 Score=107.26 Aligned_cols=153 Identities=9% Similarity=0.012 Sum_probs=109.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------CCCCce-----eeecccccCCCHHHHHHHHhc----c-CCcEEEEcccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------DDETWI-----FVSSKEADLSNLESTQQLFSK----Y-KPTHVIHLAAM 69 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~-----~~~~~~~Dl~~~~~~~~~~~~----~-~~d~Vih~a~~ 69 (358)
++|||||++-||..+++.|.++|++ ...... ...+..+|+++.+++.++++. + ++|++||+|+.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 6899999999999999999999984 111111 113457888888777666543 2 69999999986
Q ss_pred cCCc--c--ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchH
Q psy7590 70 VGGL--F--HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYS 141 (358)
Q Consensus 70 ~~~~--~--~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~ 141 (358)
.... . .+.++....+++|+.++..+.+++. +++-.++|++||...+.. .|....|+
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~----------------~~~~~~Y~ 145 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP----------------WKELSTYT 145 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC----------------CTTCHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc----------------cccccccc
Confidence 4311 1 1223455678899998888777764 344458999999865422 22223799
Q ss_pred HHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 142 HAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 142 ~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.+|...+.+.+.++.+. |+++..|.|+.+-.+.
T Consensus 146 asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~ 181 (252)
T d1zmta1 146 SARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 181 (252)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred cccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcc
Confidence 99999999888887654 8999999999886553
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.27 E-value=3.5e-11 Score=108.88 Aligned_cols=151 Identities=15% Similarity=0.063 Sum_probs=111.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc---------C--------------CCCceeeecccccCCCHHHHHHHHhc---cC
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR---------D--------------DETWIFVSSKEADLSNLESTQQLFSK---YK 59 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~---------~--------------~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~ 59 (358)
-||||||++-||+++++.|.++|.+ . ......+..+.+|++|++++.++++. .+
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~ 83 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR 83 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence 3689999999999999999998852 0 01112344568999999999988765 36
Q ss_pred CcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceecCCCCCCCccccccCCC
Q psy7590 60 PTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFPDKTTYPIDETMVHNGP 132 (358)
Q Consensus 60 ~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~ 132 (358)
+|++||+|+...... ...+.....+++|+.++.++.+++. +++-.++|++||....-
T Consensus 84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~---------------- 147 (285)
T d1jtva_ 84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM---------------- 147 (285)
T ss_dssp CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTS----------------
T ss_pred hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcC----------------
Confidence 999999998754321 2234456788999999888777764 45556899999985532
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 133 PHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 133 ~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
+.|....|+.+|...+.+.+.++.+ +|+++.++.||.|--
T Consensus 148 ~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T 190 (285)
T d1jtva_ 148 GLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT 190 (285)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCC
Confidence 2233337999999999888887665 489999999998753
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.27 E-value=4.2e-11 Score=108.65 Aligned_cols=154 Identities=16% Similarity=0.068 Sum_probs=105.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CC------------CCceeeecccccCCCHHHHHHHHhc-----cCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DD------------ETWIFVSSKEADLSNLESTQQLFSK-----YKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~------------~~~~~~~~~~~Dl~~~~~~~~~~~~-----~~~d 61 (358)
|++|||||+|-||+++++.|.++|.+ .. .....+..+.+|+++++++.+++.. .++|
T Consensus 26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 105 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 105 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccc
Confidence 68999999999999999999999984 00 0011233458999999998876654 3799
Q ss_pred EEEEcccccCCccc---cccchhhHHHHHHHHHHHHHHHHHh----c-CCCEEEEeeccceecCCCCCCCccccccCCCC
Q psy7590 62 HVIHLAAMVGGLFH---NMSHNLDFFRVNMKINDNVLDTSYK----Q-GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPP 133 (358)
Q Consensus 62 ~Vih~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~aa~~----~-~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~ 133 (358)
++||+|+....... ...+....+.+|..+...+...+.. . +...++.+||......
T Consensus 106 ilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~---------------- 169 (294)
T d1w6ua_ 106 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG---------------- 169 (294)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC----------------
T ss_pred hhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc----------------
Confidence 99999997542111 1223455677787777776655432 2 2335666666543211
Q ss_pred CCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCCC
Q psy7590 134 HPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGPH 174 (358)
Q Consensus 134 ~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~ 174 (358)
.|....|+.+|...+.+.+.++.. .|+.+..|.||.|-.+.
T Consensus 170 ~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 213 (294)
T d1w6ua_ 170 SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 213 (294)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccch
Confidence 122237999999999999888765 48999999999886553
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.22 E-value=6e-11 Score=104.29 Aligned_cols=153 Identities=16% Similarity=0.150 Sum_probs=106.0
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-------CCCCceeeecccccCCCHHHHHHH-------HhccCCcEEEEccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-------DDETWIFVSSKEADLSNLESTQQL-------FSKYKPTHVIHLAA 68 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~~~~~~~~~~Dl~~~~~~~~~-------~~~~~~d~Vih~a~ 68 (358)
+.|+||||||+|-||.++++.|.++|++ .............|..+.++.... +...++|++||+|+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG 80 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAG 80 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCc
Confidence 3579999999999999999999999974 111112222335555555443322 22235899999998
Q ss_pred ccCCc-cc---cccchhhHHHHHHHHHHHHHHHHHhc--CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHH
Q psy7590 69 MVGGL-FH---NMSHNLDFFRVNMKINDNVLDTSYKQ--GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSH 142 (358)
Q Consensus 69 ~~~~~-~~---~~~~~~~~~~~nv~~~~~ll~aa~~~--~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~ 142 (358)
..... .. ..+..+..+++|+.++..+.+++... +-.++|++||...+. +.|....|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~----------------~~~~~~~Y~a 144 (236)
T d1dhra_ 81 GWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD----------------GTPGMIGYGM 144 (236)
T ss_dssp CCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------CCTTBHHHHH
T ss_pred ccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC----------------CccCCcccHH
Confidence 53211 11 12334567899999999988888764 124899999986542 2223338999
Q ss_pred HHHHHHHHHHHHHhh-----cCceEEEEecCccc
Q psy7590 143 AKRMLDVLNKAYYQQ-----HGVTYTSVIPCNVF 171 (358)
Q Consensus 143 sK~~~E~~~~~~~~~-----~g~~~~ilRp~~v~ 171 (358)
||...+.+.+.++.+ .|+.+..+.|+.+.
T Consensus 145 sKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~ 178 (236)
T d1dhra_ 145 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLD 178 (236)
T ss_dssp HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEE
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCc
Confidence 999999999998764 37999999998775
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.18 E-value=1.3e-10 Score=101.87 Aligned_cols=150 Identities=15% Similarity=0.146 Sum_probs=103.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------C-CCCceeeecccccCCCHHHHHHHH-------hccCCcEEEEccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------D-DETWIFVSSKEADLSNLESTQQLF-------SKYKPTHVIHLAAMV 70 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~-~~~~~~~~~~~~Dl~~~~~~~~~~-------~~~~~d~Vih~a~~~ 70 (358)
.|||||||+|-||.+++++|.++|++ . .........+.+|..+.+...... +..++|++||+||..
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~ 82 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGW 82 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCccc
Confidence 48999999999999999999999984 1 111122223456666554433222 223589999999953
Q ss_pred CC-ccccc---cchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHH
Q psy7590 71 GG-LFHNM---SHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAK 144 (358)
Q Consensus 71 ~~-~~~~~---~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 144 (358)
.. ..... +..+..+++|+.++..+.+++...- -.++|++||...+. +.|....|+.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~----------------~~~~~~~Y~asK 146 (235)
T d1ooea_ 83 AGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG----------------PTPSMIGYGMAK 146 (235)
T ss_dssp CCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------CCTTBHHHHHHH
T ss_pred ccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC----------------CcccccchHHHH
Confidence 21 11111 2344578999999988888887642 23899999986542 222334899999
Q ss_pred HHHHHHHHHHHhhc-----CceEEEEecCcc
Q psy7590 145 RMLDVLNKAYYQQH-----GVTYTSVIPCNV 170 (358)
Q Consensus 145 ~~~E~~~~~~~~~~-----g~~~~ilRp~~v 170 (358)
...+.+.+.++.+. ++.+..+.|+.+
T Consensus 147 aal~~l~~~la~e~~~~~~~i~v~~i~Pg~~ 177 (235)
T d1ooea_ 147 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTL 177 (235)
T ss_dssp HHHHHHHHHHHSTTSSCCTTCEEEEEEESCB
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEecCcC
Confidence 99999999987653 678888999876
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.14 E-value=5.7e-10 Score=98.91 Aligned_cols=158 Identities=13% Similarity=0.011 Sum_probs=107.4
Q ss_pred CCCCCEEEEEcCCC--hhHHHHHHHHHHcccc------CCCCc----------eeeecccccCCCHHHHHHHHhc-----
Q psy7590 1 MAEEKIILVTGGTG--LVGKAIEKIVKEEEKR------DDETW----------IFVSSKEADLSNLESTQQLFSK----- 57 (358)
Q Consensus 1 m~~~~~VlItGatG--~lG~~l~~~L~~~g~~------~~~~~----------~~~~~~~~Dl~~~~~~~~~~~~----- 57 (358)
|.+.|+||||||+| -||+++++.|+++|++ ..... ........|+.+..+....+..
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 45678999999999 5889999999999974 11100 0122346788888777666643
Q ss_pred cCCcEEEEcccccCCcccc--------ccchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeeccceecCCCCCCCcccc
Q psy7590 58 YKPTHVIHLAAMVGGLFHN--------MSHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIFPDKTTYPIDETM 127 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~--------~~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy~~~~~~~~~E~~ 127 (358)
...|++||+++........ .+........|+.+...+.+++...- -+.+|++||....
T Consensus 82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~------------ 149 (258)
T d1qsga_ 82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------ 149 (258)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT------------
T ss_pred cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc------------
Confidence 2589999999875422111 11123456677777777777776542 2368888887542
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCCC
Q psy7590 128 VHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGPH 174 (358)
Q Consensus 128 ~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~ 174 (358)
.+.|....|+.+|...+.+.+..+... |+++..|.|+.|..+.
T Consensus 150 ----~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~ 195 (258)
T d1qsga_ 150 ----RAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 195 (258)
T ss_dssp ----SBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred ----cCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccc
Confidence 122222379999999999998887764 7999999999886553
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=3.9e-10 Score=100.96 Aligned_cols=154 Identities=14% Similarity=0.072 Sum_probs=109.0
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHcccc------CC------------CCceeeecccccCCCHHHHHHHHhc-----
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKR------DD------------ETWIFVSSKEADLSNLESTQQLFSK----- 57 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~------~~------------~~~~~~~~~~~Dl~~~~~~~~~~~~----- 57 (358)
|.+.|++|||||++-||.++++.|.++|++ .. .....+..+..|+.+.+........
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 456689999999999999999999999983 10 1112334457888888877665543
Q ss_pred cCCcEEEEcccccCCcc---ccccchhhHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccceecCCCCCCCccccccCC
Q psy7590 58 YKPTHVIHLAAMVGGLF---HNMSHNLDFFRVNMKINDNVLDTSYKQ---GVKKVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~aa~~~---~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
...|+++++|+...... ...++....+++|+.++..+.+++... +-.++|++||.+.+
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~---------------- 154 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK---------------- 154 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT----------------
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc----------------
Confidence 26899999988744211 122334567899999888887777531 12489999998643
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhh-----cCceEEEEecCcc
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQQ-----HGVTYTSVIPCNV 170 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~~-----~g~~~~ilRp~~v 170 (358)
.+.|....|+.||...+.+.+..+.+ .++.+..+.||.|
T Consensus 155 ~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v 198 (269)
T d1xu9a_ 155 VAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLI 198 (269)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCB
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcC
Confidence 22233348999999999888888654 3588899999866
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.12 E-value=1.8e-09 Score=95.15 Aligned_cols=155 Identities=14% Similarity=0.126 Sum_probs=107.8
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc------CCCCc--------eeeecccccCCCHHHHHHHHhc-----cCCcEE
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR------DDETW--------IFVSSKEADLSNLESTQQLFSK-----YKPTHV 63 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~-----~~~d~V 63 (358)
+.|.+|||||++-||.+++++|.++|++ ..... ........|+.+...+.+.... ...|.+
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 83 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccccc
Confidence 4578999999999999999999999984 11111 1122346777777666554432 258888
Q ss_pred EEcccccCCcc---------ccccchhhHHHHHHHHHHHHHHHHHhc----------CCCEEEEeeccceecCCCCCCCc
Q psy7590 64 IHLAAMVGGLF---------HNMSHNLDFFRVNMKINDNVLDTSYKQ----------GVKKVVSCLSTCIFPDKTTYPID 124 (358)
Q Consensus 64 ih~a~~~~~~~---------~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~v~r~V~~SS~~vy~~~~~~~~~ 124 (358)
++.++...... ...+.....+++|+.++..+.+++... +-.++|++||...+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~------- 156 (248)
T d2o23a1 84 VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG------- 156 (248)
T ss_dssp EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC-------
T ss_pred ccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccC-------
Confidence 88766422100 111234567899999999999988553 2237999999865421
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccCC
Q psy7590 125 ETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFGP 173 (358)
Q Consensus 125 E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~ 173 (358)
.|....|+.+|...+.+.+.++.+. |+.+..|.||.+.-+
T Consensus 157 ---------~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~ 199 (248)
T d2o23a1 157 ---------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 199 (248)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecc
Confidence 1222379999999999998887764 899999999887544
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.10 E-value=1.5e-09 Score=96.62 Aligned_cols=156 Identities=16% Similarity=0.079 Sum_probs=100.4
Q ss_pred CCCCCEEEEEcCCCh--hHHHHHHHHHHcccc------C---------CCCceeeecccccCCCHHHHHHHHhc------
Q psy7590 1 MAEEKIILVTGGTGL--VGKAIEKIVKEEEKR------D---------DETWIFVSSKEADLSNLESTQQLFSK------ 57 (358)
Q Consensus 1 m~~~~~VlItGatG~--lG~~l~~~L~~~g~~------~---------~~~~~~~~~~~~Dl~~~~~~~~~~~~------ 57 (358)
|++.|+||||||+|- ||.++++.|.++|.+ + .........+++|+++++++.++++.
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence 678899999997654 999999999999983 1 11111233458999999877666543
Q ss_pred --cCCcEEEEcccccCCcccc--------ccchhhHHHHHHHHHHHHHHHHHhcC-CCEEEEeeccceecCCCCCCCccc
Q psy7590 58 --YKPTHVIHLAAMVGGLFHN--------MSHNLDFFRVNMKINDNVLDTSYKQG-VKKVVSCLSTCIFPDKTTYPIDET 126 (358)
Q Consensus 58 --~~~d~Vih~a~~~~~~~~~--------~~~~~~~~~~nv~~~~~ll~aa~~~~-v~r~V~~SS~~vy~~~~~~~~~E~ 126 (358)
...|+++|+++........ .......+..|+........++.... ....+.++|....
T Consensus 83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~----------- 151 (268)
T d2h7ma1 83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS----------- 151 (268)
T ss_dssp TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-----------
T ss_pred cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc-----------
Confidence 1479999999964321111 11223345555566665555555443 2234444444322
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHHHhhc---CceEEEEecCcccC
Q psy7590 127 MVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQH---GVTYTSVIPCNVFG 172 (358)
Q Consensus 127 ~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G 172 (358)
...|....|+.+|...+.+.+..+... |+.+..|.|+.+-.
T Consensus 152 -----~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T 195 (268)
T d2h7ma1 152 -----RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRT 195 (268)
T ss_dssp -----SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred -----ccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCC
Confidence 122223379999999999988887653 79999999987753
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.09 E-value=2.5e-09 Score=95.78 Aligned_cols=150 Identities=15% Similarity=0.090 Sum_probs=100.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----------------------CCCCcee--------------eecccccCCC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----------------------DDETWIF--------------VSSKEADLSN 47 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----------------------~~~~~~~--------------~~~~~~Dl~~ 47 (358)
|+-+|||||++-||+++++.|.++|.+ ....... .....+|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 346799999999999999999999973 0111111 1224578999
Q ss_pred HHHHHHHHhc-----cCCcEEEEcccccCCcccccc---c--------------hhhHHHHHHHHHHHHHHHHHhc----
Q psy7590 48 LESTQQLFSK-----YKPTHVIHLAAMVGGLFHNMS---H--------------NLDFFRVNMKINDNVLDTSYKQ---- 101 (358)
Q Consensus 48 ~~~~~~~~~~-----~~~d~Vih~a~~~~~~~~~~~---~--------------~~~~~~~nv~~~~~ll~aa~~~---- 101 (358)
.++++++++. .++|++||+||...+...... . ...++.+|+.++..+.+++.+.
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 9988887753 269999999997542111100 0 1135788888888888876542
Q ss_pred ------CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCc
Q psy7590 102 ------GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCN 169 (358)
Q Consensus 102 ------~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~ 169 (358)
+..++|+++|..... +.+....|+.+|...+.+.+.++.. .|+.+..|-|+.
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~----------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~ 222 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQ----------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 222 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTS----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred HHHhcCCCCcccccccccccC----------------CccceeeeccccccchhhhHHHHHHhCCcccccccccccc
Confidence 123577666664321 1222237999999999998888765 489999999985
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.05 E-value=2.9e-09 Score=92.98 Aligned_cols=152 Identities=19% Similarity=0.131 Sum_probs=103.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----CCCCceeeecccccCCCHHHHHHHHhc----cCCcEEEEcccccCCc--
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----DDETWIFVSSKEADLSNLESTQQLFSK----YKPTHVIHLAAMVGGL-- 73 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~d~Vih~a~~~~~~-- 73 (358)
|++|||||++-||+++++.|.++|++ -...........+|+.+......+... ...+.+++.++.....
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKI 81 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccccceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccc
Confidence 68999999999999999999999984 111111223347899888766655432 2455556555432210
Q ss_pred -----cccccchhhHHHHHHHHHHHHHHHHHhc----------CCCEEEEeeccceecCCCCCCCccccccCCCCCCCCc
Q psy7590 74 -----FHNMSHNLDFFRVNMKINDNVLDTSYKQ----------GVKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNF 138 (358)
Q Consensus 74 -----~~~~~~~~~~~~~nv~~~~~ll~aa~~~----------~v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~ 138 (358)
....+.....++.|+.+...+...+... +-.++|++||...+-. .|...
T Consensus 82 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~----------------~~~~~ 145 (241)
T d1uaya_ 82 LGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG----------------QIGQA 145 (241)
T ss_dssp BCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHC----------------CTTCH
T ss_pred cccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccC----------------CCCch
Confidence 0111234567889998888888776543 2348999999865421 12223
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecCcccC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFG 172 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G 172 (358)
.|+.+|...+.+.+.++.+ +|+++..|-|+.+--
T Consensus 146 ~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T 182 (241)
T d1uaya_ 146 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDT 182 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSS
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccc
Confidence 8999999999999888765 489999999988753
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1.3e-09 Score=97.65 Aligned_cols=166 Identities=20% Similarity=0.148 Sum_probs=108.6
Q ss_pred CEE-EEEcCCChhHHHHHHHHHHc-ccc------C-----------CCCceeeecccccCCCHHHHHHHHhcc-----CC
Q psy7590 5 KII-LVTGGTGLVGKAIEKIVKEE-EKR------D-----------DETWIFVSSKEADLSNLESTQQLFSKY-----KP 60 (358)
Q Consensus 5 ~~V-lItGatG~lG~~l~~~L~~~-g~~------~-----------~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~ 60 (358)
|+| |||||++-||.++++.|.++ |.+ . ......+.++.+|++|.+++.++++.. ++
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i 82 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 82 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 566 89999999999999999986 652 0 001123445689999999988776542 69
Q ss_pred cEEEEcccccCCccccc---cchhhHHHHHHHHHHHHHHHHHhcC--CCEEEEeecccee-cCCCCCC----------Cc
Q psy7590 61 THVIHLAAMVGGLFHNM---SHNLDFFRVNMKINDNVLDTSYKQG--VKKVVSCLSTCIF-PDKTTYP----------ID 124 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~---~~~~~~~~~nv~~~~~ll~aa~~~~--v~r~V~~SS~~vy-~~~~~~~----------~~ 124 (358)
|++||.||......... ++....+++|+.++..+.+++...= -.++|.+||.... +.....+ ..
T Consensus 83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~ 162 (275)
T d1wmaa1 83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 162 (275)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence 99999999754321111 2234578899999999999986531 2389999997432 1000000 00
Q ss_pred c---------------ccccCCCCCCCCcchHHHHHHHHHHHHHHHhh-------cCceEEEEecCccc
Q psy7590 125 E---------------TMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ-------HGVTYTSVIPCNVF 171 (358)
Q Consensus 125 E---------------~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~-------~g~~~~ilRp~~v~ 171 (358)
+ ......+..+.. .|+.||.....+.+.++++ .|+.+..+-|++|-
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~ 230 (275)
T d1wmaa1 163 EEELVGLMNKFVEDTKKGVHQKEGWPSS-AYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 230 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTTTTCCSC-HHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred hhhhccccccchhcccccccccCCCchH-HHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence 0 000011222333 6999999888776655443 27999999998874
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.92 E-value=2.1e-08 Score=89.35 Aligned_cols=157 Identities=11% Similarity=-0.010 Sum_probs=96.8
Q ss_pred CCCCCEEEEEcCCC--hhHHHHHHHHHHcccc------CCCC----------ceeeecccccCCCHHHHHHHHhc-----
Q psy7590 1 MAEEKIILVTGGTG--LVGKAIEKIVKEEEKR------DDET----------WIFVSSKEADLSNLESTQQLFSK----- 57 (358)
Q Consensus 1 m~~~~~VlItGatG--~lG~~l~~~L~~~g~~------~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~----- 57 (358)
|++.|++|||||+| -||.++++.|.++|.+ .... .....+...|+++.+++.+++..
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 81 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence 56778999999988 5999999999999984 1110 11223457899999888777643
Q ss_pred cCCcEEEEcccccCCcc---ccc-cchhhHHHHHHH---HHHHHHHHHHhc-CCCE-EEEeeccceecCCCCCCCccccc
Q psy7590 58 YKPTHVIHLAAMVGGLF---HNM-SHNLDFFRVNMK---INDNVLDTSYKQ-GVKK-VVSCLSTCIFPDKTTYPIDETMV 128 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~---~~~-~~~~~~~~~nv~---~~~~ll~aa~~~-~v~r-~V~~SS~~vy~~~~~~~~~E~~~ 128 (358)
.++|++||+++...... ... .........+.. ....+....... +..+ ++..|+.+....
T Consensus 82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~----------- 150 (274)
T d2pd4a1 82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY----------- 150 (274)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------
T ss_pred CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc-----------
Confidence 26999999999643211 111 112222222222 223333333222 2223 444444443321
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 129 HNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 129 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.+....|+.+|...+.+.+..+.. .|+++..+.|+.+.-+
T Consensus 151 -----~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~ 193 (274)
T d2pd4a1 151 -----MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTL 193 (274)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred -----cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCc
Confidence 122237999999999988877665 4899999999877654
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.88 E-value=7.3e-08 Score=86.59 Aligned_cols=102 Identities=11% Similarity=-0.055 Sum_probs=66.5
Q ss_pred CCcEEEEcccccCCc-----cccccchhhHHHHHHHHHHHHHHHHHhcCCC--EEEEeeccceecCCCCCCCccccccCC
Q psy7590 59 KPTHVIHLAAMVGGL-----FHNMSHNLDFFRVNMKINDNVLDTSYKQGVK--KVVSCLSTCIFPDKTTYPIDETMVHNG 131 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~--r~V~~SS~~vy~~~~~~~~~E~~~~~~ 131 (358)
++|++||+|+..... ..+.++....+++|+.+...+..++.....+ +.+.+++.+....
T Consensus 119 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------- 184 (297)
T d1d7oa_ 119 SIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERI-------------- 184 (297)
T ss_dssp CEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSC--------------
T ss_pred CCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccc--------------
Confidence 699999999864211 1122345678899999999999988765321 3455555433211
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHh----hcCceEEEEecCcccCCCC
Q psy7590 132 PPHPSNFGYSHAKRMLDVLNKAYYQ----QHGVTYTSVIPCNVFGPHD 175 (358)
Q Consensus 132 ~~~p~~~~Y~~sK~~~E~~~~~~~~----~~g~~~~ilRp~~v~G~~~ 175 (358)
...... .|+.+|...+.+.+..+. +.|+++..|.|+.+..+..
T Consensus 185 ~~~~~~-~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~ 231 (297)
T d1d7oa_ 185 IPGYGG-GMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAA 231 (297)
T ss_dssp CTTCTT-THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCS
T ss_pred cccccc-ceecccccccccccccchhccccceEEecccccccccchhh
Confidence 111122 699999888777655433 4589999999998876543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.87 E-value=8.7e-08 Score=84.54 Aligned_cols=152 Identities=16% Similarity=0.133 Sum_probs=90.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc------C----------------CCCceeeec-ccccCCCHHHHHHHHh----c-
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR------D----------------DETWIFVSS-KEADLSNLESTQQLFS----K- 57 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~------~----------------~~~~~~~~~-~~~Dl~~~~~~~~~~~----~- 57 (358)
..|||||++-||.++++.|+++|.+ . ......+.. ...|....+.+.++++ .
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999983 1 111111211 1223333444444433 2
Q ss_pred cCCcEEEEcccccCCcccc--------------ccchhhHHHHHHHHHHHHHHHHHhcC---------CCEEEEeeccce
Q psy7590 58 YKPTHVIHLAAMVGGLFHN--------------MSHNLDFFRVNMKINDNVLDTSYKQG---------VKKVVSCLSTCI 114 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~--------------~~~~~~~~~~nv~~~~~ll~aa~~~~---------v~r~V~~SS~~v 114 (358)
.++|++||+|+...+.... ..........|..+............ ...++.+|+...
T Consensus 83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (266)
T d1mxha_ 83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT 162 (266)
T ss_dssp SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence 2699999999975421110 01122344555555555544444321 224445555433
Q ss_pred ecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 115 FPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 115 y~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
. ...|....|+.||...+.+.+..+.. .|+++..|.||.+.-+
T Consensus 163 ~----------------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~ 208 (266)
T d1mxha_ 163 D----------------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 208 (266)
T ss_dssp G----------------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred c----------------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecc
Confidence 2 22233338999999999988888765 4899999999987544
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.73 E-value=1.3e-07 Score=83.09 Aligned_cols=163 Identities=19% Similarity=0.166 Sum_probs=95.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccC---CCCceeeecccccCCCHHHHHHHHhc------cCCcEEEEcccccCCcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRD---DETWIFVSSKEADLSNLESTQQLFSK------YKPTHVIHLAAMVGGLF 74 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~d~Vih~a~~~~~~~ 74 (358)
||.||||||++-||+++++.|.++|++- ..+.. ....|+.+.+........ ...|+++++|+...
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~--- 74 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA---EVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP--- 74 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS---SEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT---
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH---HHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCC---
Confidence 4678999999999999999999999841 11111 125678777665544321 15899999998653
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHH----hcCCCEEEEeeccceec-CCCCCCCcc--cc---------ccCCCCCCCCc
Q psy7590 75 HNMSHNLDFFRVNMKINDNVLDTSY----KQGVKKVVSCLSTCIFP-DKTTYPIDE--TM---------VHNGPPHPSNF 138 (358)
Q Consensus 75 ~~~~~~~~~~~~nv~~~~~ll~aa~----~~~v~r~V~~SS~~vy~-~~~~~~~~E--~~---------~~~~~~~p~~~ 138 (358)
...........|..+...+.+... +........+++..... .....+... .. .......+...
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~ 153 (257)
T d1fjha_ 75 -QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNL 153 (257)
T ss_dssp -TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHH
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchH
Confidence 223344556677776666655443 33444455555442211 100000000 00 00001111122
Q ss_pred chHHHHHHHHHHHHHHHhh---cCceEEEEecCcccCC
Q psy7590 139 GYSHAKRMLDVLNKAYYQQ---HGVTYTSVIPCNVFGP 173 (358)
Q Consensus 139 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~ 173 (358)
.|+.+|...+.+.+.++.. +|+++..|.|+.+-.+
T Consensus 154 ~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~ 191 (257)
T d1fjha_ 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETP 191 (257)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----
T ss_pred HHHHHhhhhhccccccccccccccccccccccCCcCCh
Confidence 6999999999998888654 4899999999887544
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.58 E-value=7.2e-07 Score=81.44 Aligned_cols=151 Identities=13% Similarity=0.055 Sum_probs=97.7
Q ss_pred CEEEEEc--CCChhHHHHHHHHHHccccC----------------------------CCC-ceeeec-------------
Q psy7590 5 KIILVTG--GTGLVGKAIEKIVKEEEKRD----------------------------DET-WIFVSS------------- 40 (358)
Q Consensus 5 ~~VlItG--atG~lG~~l~~~L~~~g~~~----------------------------~~~-~~~~~~------------- 40 (358)
+..|||| ++.-||+++++.|.++|.+- ..+ ......
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI 82 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGC
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhccc
Confidence 5689999 45689999999999998520 000 000000
Q ss_pred -------ccccCCCHHHHHHHHhc-----cCCcEEEEcccccCCcc-----ccccchhhHHHHHHHHHHHHHHHHHhcC-
Q psy7590 41 -------KEADLSNLESTQQLFSK-----YKPTHVIHLAAMVGGLF-----HNMSHNLDFFRVNMKINDNVLDTSYKQG- 102 (358)
Q Consensus 41 -------~~~Dl~~~~~~~~~~~~-----~~~d~Vih~a~~~~~~~-----~~~~~~~~~~~~nv~~~~~ll~aa~~~~- 102 (358)
...|+.+.+++.++++. -++|++||.|+...+.. .+.++....+++|+.++..+.+++...=
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~ 162 (329)
T d1uh5a_ 83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK 162 (329)
T ss_dssp CHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred chhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcc
Confidence 12255555444444332 26999999998654211 1233456788899998888888887651
Q ss_pred -CCEEEEeeccceecCCCCCCCccccccCCCCCCCCcchHHHHHHHHHHHHHHHhh----cCceEEEEecCcc
Q psy7590 103 -VKKVVSCLSTCIFPDKTTYPIDETMVHNGPPHPSNFGYSHAKRMLDVLNKAYYQQ----HGVTYTSVIPCNV 170 (358)
Q Consensus 103 -v~r~V~~SS~~vy~~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~----~g~~~~ilRp~~v 170 (358)
-.++|.+||.+.... .+.... .|+.+|...+.+.+.++.+ +|+++..|.||.|
T Consensus 163 ~~GsIv~iss~~~~~~--------------~p~y~~-~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i 220 (329)
T d1uh5a_ 163 PQSSIISLTYHASQKV--------------VPGYGG-GMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL 220 (329)
T ss_dssp EEEEEEEEECGGGTSC--------------CTTCTT-THHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred cccccccceeehhccc--------------ccccch-hhhhhhccccccchhhHHHHhcccCcEEEEEecCcc
Confidence 237888887754221 111122 5999999999888877643 5899999999865
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.15 E-value=5.5e-07 Score=75.69 Aligned_cols=65 Identities=20% Similarity=0.194 Sum_probs=52.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCC----------CceeeecccccCCCHHHHHHHHhccCCcEEEEcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDE----------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLA 67 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a 67 (358)
.|+|+||||+|.+|+.+++.|.++|.+ ... ....+....+|+.+.+++.+++. ++|+|||+|
T Consensus 23 gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~iDilin~A 100 (191)
T d1luaa1 23 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK--GAHFVFTAG 100 (191)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT--TCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhc--CcCeeeecC
Confidence 579999999999999999999999984 100 01123345789999999999998 599999999
Q ss_pred ccc
Q psy7590 68 AMV 70 (358)
Q Consensus 68 ~~~ 70 (358)
+..
T Consensus 101 g~g 103 (191)
T d1luaa1 101 AIG 103 (191)
T ss_dssp CTT
T ss_pred ccc
Confidence 863
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.91 E-value=5.2e-05 Score=60.96 Aligned_cols=97 Identities=16% Similarity=0.149 Sum_probs=65.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeeccccc-----------------------CCCHHHHHHHHhc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEAD-----------------------LSNLESTQQLFSK 57 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~D-----------------------l~~~~~~~~~~~~ 57 (358)
|.+.|||.|+||+|++|++++..|+..+.-..........+..| ........+.++
T Consensus 1 m~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (154)
T d1y7ta1 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFK- 79 (154)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT-
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcc-
Confidence 67778999999999999999999987654211111111100000 001122335566
Q ss_pred cCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC
Q psy7590 58 YKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG 102 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~ 102 (358)
++|+||-++|... ....+..+.++.|..-.+.+.+.+.+..
T Consensus 80 -~advViitaG~~~---~pg~~r~dl~~~N~~i~~~~~~~i~k~a 120 (154)
T d1y7ta1 80 -DADYALLVGAAPR---KAGMERRDLLQVNGKIFTEQGRALAEVA 120 (154)
T ss_dssp -TCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred -cccEEEeecCcCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5999999999754 2335667889999999999999999864
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.81 E-value=6.2e-05 Score=59.82 Aligned_cols=101 Identities=14% Similarity=0.137 Sum_probs=68.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCCCCceee--------eccccc-------CCCHHHHHHHHhccCCcEEEEccccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDDETWIFV--------SSKEAD-------LSNLESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~--------~~~~~D-------l~~~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
||.|+||+|.+|++++..|..++.-....+..+ +.-+++ .....+..+.++ ++|+||.+|+..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~--~aDivVitag~~ 79 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLK--GCDVVVIPAGVP 79 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHT--TCSEEEECCSCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhC--CCCEEEECCCcC
Confidence 799999999999999999988876211000000 000000 112344556677 599999999964
Q ss_pred CCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 71 GGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 71 ~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
. ....+.....+.|+...+.+++.+.+++.+.+|.+-|
T Consensus 80 ~---~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 80 R---KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp C---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred C---CCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 3 2334667789999999999999999998765554443
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.74 E-value=5.6e-05 Score=60.20 Aligned_cols=25 Identities=24% Similarity=0.325 Sum_probs=22.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
|+||.|+||||++|+.+++.|+++.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~ 25 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEER 25 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT
T ss_pred CcEEEEECCccHHHHHHHHHHHhCC
Confidence 5699999999999999999998764
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.60 E-value=0.00016 Score=57.39 Aligned_cols=98 Identities=14% Similarity=0.228 Sum_probs=61.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHH------HHH----------------HHHhcc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLE------STQ----------------QLFSKY 58 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~------~~~----------------~~~~~~ 58 (358)
|.+.|||.|+|+ |++|+.++..|+..+.- .... -.|+.... ++. +.+.
T Consensus 2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~--~elv-----L~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~-- 71 (146)
T d1ez4a1 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIA--EEFV-----IVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCK-- 71 (146)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCC--SEEE-----EECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGT--
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCC--cEEE-----EeecccchhHHHHHHHhccccccCCceEeeccHHHhc--
Confidence 667789999995 99999999999988741 0011 11211000 000 1233
Q ss_pred CCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 59 KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
++|+||.+++... ....+.......|+...+.+.+.+.+++.+.++.+-|
T Consensus 72 ~adivvitag~~~---~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 72 DADLVVITAGAPQ---KPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp TCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred cccEEEEeccccc---CCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 6999999988654 2234566788899999999999999998775554443
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.57 E-value=0.00017 Score=57.16 Aligned_cols=98 Identities=16% Similarity=0.165 Sum_probs=62.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeee-------cccccCCCHH--------------HHHHHHhccCCcEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVS-------SKEADLSNLE--------------STQQLFSKYKPTHV 63 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~-------~~~~Dl~~~~--------------~~~~~~~~~~~d~V 63 (358)
|||.|+||+|.+|++++..|+.++.-....+..++ -...|+.+.. .-.+.++ ++|+|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~--~aDvV 78 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIID--ESDVV 78 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGT--TCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhc--cceEE
Confidence 58999999999999999999887641111111000 0001111100 0012333 59999
Q ss_pred EEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 64 IHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 64 ih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
|-+||... ....+..+.++.|..-.+.+.+...+.+.+.++
T Consensus 79 VitAG~~~---~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~ii 119 (145)
T d1hyea1 79 IITSGVPR---KEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIF 119 (145)
T ss_dssp EECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred EEeccccc---CCCCChhhhhhhhHHHHHHHHHHHhccCCCeEE
Confidence 99998643 223456778999999999999999998765554
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.00087 Score=52.94 Aligned_cols=95 Identities=20% Similarity=0.240 Sum_probs=61.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHc-cccCCCCceeeec------ccccCC------------CHHHHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEE-EKRDDETWIFVSS------KEADLS------------NLESTQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~-g~~~~~~~~~~~~------~~~Dl~------------~~~~~~~~~~~~~~d~Vih 65 (358)
|||.|+|++|.+|++++-.|..+ +.-. ....++. ...|+. ...+ .+.++ +.|+||.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~--el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~-~~~~~--~aDvvvi 75 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGS--ELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDA-TPALE--GADVVLI 75 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTC--EEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCC-HHHHT--TCSEEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCc--EEEEecccccchhHHHHHHCCccccCCcEEEcCCC-ccccC--CCCEEEE
Confidence 58999999999999999887643 4310 0000000 000110 1111 22455 5899999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+|+... ....+-.++.+.|..-.+.+.+.+.+.+.+.+|
T Consensus 76 taG~~~---k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aiv 114 (145)
T d2cmda1 76 SAGVRR---KPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACI 114 (145)
T ss_dssp CCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred CCCccC---CCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 999753 233466778999999999999999999866444
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.28 E-value=0.0017 Score=52.85 Aligned_cols=100 Identities=13% Similarity=0.050 Sum_probs=64.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCC-------------------------HHHHHHHHhcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSN-------------------------LESTQQLFSKY 58 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~-------------------------~~~~~~~~~~~ 58 (358)
.-||.|+||+|.+|++++-.|+....-.......+ .-.|+.. .....++++
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L--~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~-- 99 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIAL--KLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFE-- 99 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEE--EEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTT--
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEE--EEecCccccchhcchhhhhcccccccccCccccccchhhcc--
Confidence 34899999999999999999886532111111111 0111111 112334555
Q ss_pred CCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCC-C-EEEEee
Q psy7590 59 KPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGV-K-KVVSCL 110 (358)
Q Consensus 59 ~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v-~-r~V~~S 110 (358)
++|+||-+++... .......+.+..|..-.+.+.+++.+... . +++.+|
T Consensus 100 ~aDvVvi~ag~~r---kpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 100 DVDWALLIGAKPR---GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp TCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred CCceEEEeeccCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 5899999998753 34456778999999999999999999643 2 455444
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.27 E-value=0.00039 Score=55.09 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g 28 (358)
|||.|.||||++|+.|++.|+++.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~ 24 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEER 24 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTT
T ss_pred CEEEEECCccHHHHHHHHHHHhcC
Confidence 589999999999999999998754
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.21 E-value=0.00081 Score=52.00 Aligned_cols=83 Identities=18% Similarity=0.223 Sum_probs=57.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCC------CceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDE------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGG 72 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~ 72 (358)
|+|+|+|+ |.+|+.|++.|.+.|+. ++. .......+.+|.++++.+.++--+ ++|+++-+..
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~-~a~~vv~~t~---- 74 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIE-DADMYIAVTG---- 74 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTT-TCSEEEECCS----
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChh-hhhhhcccCC----
Confidence 58999996 99999999999999984 111 011345678999999999888533 5888884411
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 73 LFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 73 ~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+ -+.|+. +...++..+++++|
T Consensus 75 ------~----d~~N~~----~~~~~k~~~~~~iI 95 (132)
T d1lssa_ 75 ------K----EEVNLM----SSLLAKSYGINKTI 95 (132)
T ss_dssp ------C----HHHHHH----HHHHHHHTTCCCEE
T ss_pred ------c----HHHHHH----HHHHHHHcCCceEE
Confidence 1 134544 33456677877766
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.15 E-value=0.00027 Score=55.93 Aligned_cols=26 Identities=31% Similarity=0.461 Sum_probs=23.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.|||.|.||||++|+.|++.|.++++
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~h 27 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDF 27 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC
Confidence 46899999999999999999976654
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.03 E-value=0.0011 Score=52.88 Aligned_cols=93 Identities=16% Similarity=0.159 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCH-------------------------HHHHHHHhc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNL-------------------------ESTQQLFSK 57 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~-------------------------~~~~~~~~~ 57 (358)
+.|||.|+||+|.+|++++..|...+.-.... .++.+..|.... ....++++
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~--~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQ--PIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFK- 78 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTC--CEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTT-
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCC--ccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccC-
Confidence 46799999999999999999998654211000 011112222111 11224444
Q ss_pred cCCcEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcC
Q psy7590 58 YKPTHVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQG 102 (358)
Q Consensus 58 ~~~d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~ 102 (358)
++|+||-+++... .......+.++.|..-.+.+.+.+.+..
T Consensus 79 -~~dvVVitag~~~---~~g~sr~dll~~N~~i~k~~~~~i~k~a 119 (154)
T d5mdha1 79 -DLDVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKYA 119 (154)
T ss_dssp -TCSEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHHS
T ss_pred -CceEEEEecccCC---CCCCchhHHHHHhHHHHHHHHHHHHhhC
Confidence 5899999998754 2334556678999999999999987753
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.00 E-value=0.003 Score=49.37 Aligned_cols=93 Identities=14% Similarity=0.084 Sum_probs=62.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHH----------------------HHHHhccCCcE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLEST----------------------QQLFSKYKPTH 62 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~----------------------~~~~~~~~~d~ 62 (358)
|||.|+|+ |.+|++++..|+.++.-. . .+-.|+...... .+.++ ++|+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~--e-----l~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~--~adi 70 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAR--E-----MVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLK--GSDV 70 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCS--E-----EEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGT--TCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCC--E-----EEEEecccccccchhccccccccccccccccCCcHHHhc--CCCE
Confidence 58999996 999999999888876511 1 111222111000 11233 6999
Q ss_pred EEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEee
Q psy7590 63 VIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110 (358)
Q Consensus 63 Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~S 110 (358)
||-+|+... .......+....|..-.+.+.+...+.+.+.++.+-
T Consensus 71 vvitag~~~---~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivv 115 (140)
T d1a5za1 71 VIVAAGVPQ---KPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV 115 (140)
T ss_dssp EEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred EEEeccccc---CCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEe
Confidence 999998754 223455678889999999999999999877555443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.99 E-value=0.0028 Score=50.04 Aligned_cols=90 Identities=16% Similarity=0.208 Sum_probs=61.0
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHH------HHH-----------------HHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLE------STQ-----------------QLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~------~~~-----------------~~~~~~~~d 61 (358)
+||.|+|| |.+|++++..|+..+.-. +.. -.|+.... ++. +.++ ++|
T Consensus 7 ~KI~IiGa-G~vG~~~a~~l~~~~l~~--el~-----L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~--daD 76 (148)
T d1ldna1 7 ARVVVIGA-GFVGASYVFALMNQGIAD--EIV-----LIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCR--DAD 76 (148)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCS--EEE-----EECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTT--TCS
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCc--eEE-----EEeeccccccchhccHhhCccccCCCeEEEECCHHHhc--cce
Confidence 58999996 999999999999887511 111 11211000 011 2333 689
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+||.+++... .......+....|..-.+.+.+.+.+++.+.++
T Consensus 77 vvvitag~~~---~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ 119 (148)
T d1ldna1 77 LVVICAGANQ---KPGETRLDLVDKNIAIFRSIVESVMASGFQGLF 119 (148)
T ss_dssp EEEECCSCCC---CTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEE
T ss_pred eEEEeccccc---ccCcchhHHHHHHHHHHHHHHHHHHhhCCCceE
Confidence 9999988754 233455678899999999999999999866443
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.97 E-value=0.0037 Score=48.93 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=62.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHH--------HHH----------------HHHhccCCc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLE--------STQ----------------QLFSKYKPT 61 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~--------~~~----------------~~~~~~~~d 61 (358)
||.|+||+|.+|++++..|+.++.-. ... -.|+...+ ++. +.+. ++|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~--el~-----L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~--~aD 72 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIAD--EVV-----FVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTA--GSD 72 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCS--EEE-----EECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGT--TCS
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCC--EEE-----EEecCCcccccceeecchhhcccccCCceEeeCCHHHhh--hcC
Confidence 79999999999999999999887521 111 11211000 111 1122 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+|+-+|+... ....+-.+.++.|..-.+.+.+.+.+.+.+.++
T Consensus 73 iVvitaG~~~---~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ 115 (142)
T d1o6za1 73 VVVITAGIPR---QPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYIS 115 (142)
T ss_dssp EEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEE
T ss_pred EEEEeccccc---ccCCchhhHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 9999998643 233456789999999999999999999866444
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.95 E-value=0.0039 Score=48.71 Aligned_cols=97 Identities=19% Similarity=0.167 Sum_probs=61.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCHH------------HHHHHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNLE------------STQQLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~~------------~~~~~~~~~~~d~Vih 65 (358)
|||.|+|| |.+|++++..|+..+.-. ....++. ...|+.+.. .-.+.++ ++|+|+-
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~--el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~--dadvvvi 75 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLAR--ELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTA--NSDIVII 75 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCS--EEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGT--TCSEEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCc--eEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhc--CCeEEEE
Confidence 58999996 999999999999886411 0110000 000110000 0012333 6999999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
+|+... ..........+.|..-.+.+.+.+.+.+.+.++.+
T Consensus 76 tag~~~---~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv 116 (142)
T d1guza1 76 TAGLPR---KPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV 116 (142)
T ss_dssp CCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred EEecCC---CCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence 998643 22245667889999999999999999886655443
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=96.95 E-value=0.0036 Score=49.73 Aligned_cols=104 Identities=18% Similarity=0.164 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCC-------------HHHHHHHHhccCCc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSN-------------LESTQQLFSKYKPT 61 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~-------------~~~~~~~~~~~~~d 61 (358)
.+.+||.|+|+ |.+|+.++..|...+.. ....++. ...|+.+ .....++++ ++|
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~---el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~--~ad 78 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELA---DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALT--GAD 78 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCC---EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHT--TCS
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCc---eEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhc--CCC
Confidence 34569999997 99999999887777641 1111100 0011110 012234455 599
Q ss_pred EEEEcccccCCccc--cccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 62 HVIHLAAMVGGLFH--NMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 62 ~Vih~a~~~~~~~~--~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
+|+-+++....+.. ....-......|....+.+++.+.+.+.+.++.+-|
T Consensus 79 iVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs 130 (154)
T d1pzga1 79 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 130 (154)
T ss_dssp EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred eEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999986532111 112456788999999999999999998775655443
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.81 E-value=0.00029 Score=54.60 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=48.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHH
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFF 84 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~ 84 (358)
|||.|.|++|-.|+.|.+.+.+.++. -... .|.... +.+. ++|+||.+..+.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~---l~~~-----id~~~~----~~~~--~~DVvIDFS~p~-------------- 52 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHE---LVLK-----VDVNGV----EELD--SPDVVIDFSSPE-------------- 52 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCE---EEEE-----EETTEE----EECS--CCSEEEECSCGG--------------
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCe---EEEE-----ECCCcH----HHhc--cCCEEEEecCHH--------------
Confidence 58999999999999999888777541 1111 121111 1233 589999885543
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 85 RVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 85 ~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
++...+++|.++++ .+|.-+|
T Consensus 53 -----~~~~~l~~~~~~~~-p~ViGTT 73 (128)
T d1vm6a3 53 -----ALPKTVDLCKKYRA-GLVLGTT 73 (128)
T ss_dssp -----GHHHHHHHHHHHTC-EEEECCC
T ss_pred -----HHHHHHHHHHhcCC-CEEEEcC
Confidence 34568899999997 4664333
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.80 E-value=0.006 Score=47.68 Aligned_cols=94 Identities=13% Similarity=0.100 Sum_probs=62.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHH------HHH------------------HHHhccCC
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLE------STQ------------------QLFSKYKP 60 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~------~~~------------------~~~~~~~~ 60 (358)
|||.|+|+ |.+|++++..|+.++.-. . .+-.|+.... ++. +.+. ++
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~--e-----lvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~--~a 70 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVD--E-----IALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLK--GS 70 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCS--E-----EEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGT--TC
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCc--e-----EEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhc--cc
Confidence 58999996 999999999988876411 1 1112221100 010 1333 68
Q ss_pred cEEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Q psy7590 61 THVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLS 111 (358)
Q Consensus 61 d~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS 111 (358)
|+||-+|+... .......+....|..-.+.+.+.+.+.+.+.++.+-|
T Consensus 71 diVvitag~~~---~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 71 EIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp SEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred cEEEEeccccC---CCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence 99999888643 2334567788999999999999999998665554443
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.61 E-value=0.0029 Score=49.10 Aligned_cols=72 Identities=21% Similarity=0.221 Sum_probs=47.0
Q ss_pred EEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccccccchhhHHH
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMSHNLDFFR 85 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~ 85 (358)
||.|+|++|-+|+.|++.+.+... ..... ..|..+.. . .+...++|+||.+..+.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~---~~l~~----~~d~~~~~--~-~~~~~~~DvvIDFS~p~--------------- 55 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADD---LTLSA----ELDAGDPL--S-LLTDGNTEVVIDFTHPD--------------- 55 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTT---SEEEE----EECTTCCT--H-HHHTTTCSEEEECCCTT---------------
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC---CEEEE----EEecCCch--h-hhccccCCEEEEcccHH---------------
Confidence 799999999999999999887631 11111 12332222 2 22223699999886543
Q ss_pred HHHHHHHHHHHHHHhcCCCEEE
Q psy7590 86 VNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 86 ~nv~~~~~ll~aa~~~~v~r~V 107 (358)
++...++.|.+.+++ +|
T Consensus 56 ----~~~~~~~~~~~~~~~-~V 72 (135)
T d1yl7a1 56 ----VVMGNLEFLIDNGIH-AV 72 (135)
T ss_dssp ----THHHHHHHHHHTTCE-EE
T ss_pred ----HHHHHHHHHHhcCCC-EE
Confidence 344578899999985 55
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=96.50 E-value=0.012 Score=46.00 Aligned_cols=91 Identities=13% Similarity=0.154 Sum_probs=62.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHH------HHH-----------------HHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLE------STQ-----------------QLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~------~~~-----------------~~~~~~~~d 61 (358)
.||.|+|+ |.+|++++..|+.++.-+ . .+-.|+.... ++. +.+. ++|
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~--E-----lvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~--daD 71 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAR--E-----IVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICR--DAD 71 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCS--E-----EEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGT--TCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCc--E-----EEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhh--CCc
Confidence 48999996 999999999999887521 1 1112221110 011 1233 689
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEE
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~ 108 (358)
+||-+|+... .......+....|..-.+.+.+.+.+.+.+.++.
T Consensus 72 vVVitaG~~~---~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~i 115 (143)
T d1llda1 72 MVVITAGPRQ---KPGQSRLELVGATVNILKAIMPNLVKVAPNAIYM 115 (143)
T ss_dssp EEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEeccccc---CCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEE
Confidence 9999999754 2335566789999999999999999998664443
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.48 E-value=0.015 Score=46.25 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=61.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHH------HH-----------------HHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLES------TQ-----------------QLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~------~~-----------------~~~~~~~~d 61 (358)
+||.|+|+ |.+|+.++-.|...+.-.. .+-.|...... +. +.+. ++|
T Consensus 21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~E-------lvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~--~ad 90 (160)
T d1i0za1 21 NKITVVGV-GQVGMACAISILGKSLADE-------LALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTA--NSK 90 (160)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCCSE-------EEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGT--TCS
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCcE-------EEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcc--ccc
Confidence 48999996 9999999999999876211 11222211110 10 1222 699
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+||.+|+... ....+.....+.|..-.+.+...+.+.+.+.++
T Consensus 91 iVVitAg~~~---~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aii 133 (160)
T d1i0za1 91 IVVVTAGVRQ---QEGESRLNLVQRNVNVFKFIIPQIVKYSPDCII 133 (160)
T ss_dssp EEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEEEecCCcc---ccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9999999754 223556678899999999999999999866444
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.48 E-value=0.0073 Score=47.17 Aligned_cols=98 Identities=14% Similarity=0.144 Sum_probs=59.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCcee-----eecccccCCC----------HHHHHHHHhccCCcEEEEcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIF-----VSSKEADLSN----------LESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~-----~~~~~~Dl~~----------~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
+||.|+|+ |.+|+.++..|+..+.-+...+.. ..-...|+.+ .....+.+. ++|+|+-+|+.
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~--~adivvitag~ 78 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVK--DCDVIVVTAGA 78 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGT--TCSEEEECCCC
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhC--CCceEEEeccc
Confidence 47999997 999999999999887521000000 0000111111 000112344 59999999986
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEE
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~ 108 (358)
.. ....+.......|..-.+.+.+.+.+.+.+.++.
T Consensus 79 ~~---~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~i 114 (142)
T d1y6ja1 79 NR---KPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVIL 114 (142)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEE
T ss_pred cc---CcCcchhHHhhHHHHHHHHHHHHhhccCCCceEE
Confidence 53 2335667789999999999999999988765443
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.42 E-value=0.0056 Score=46.92 Aligned_cols=59 Identities=19% Similarity=0.092 Sum_probs=43.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----------CCCCceeeecccccCCCHHHHHHH-HhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----------DDETWIFVSSKEADLSNLESTQQL-FSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----------~~~~~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~Vih~ 66 (358)
|+++|+|+ |.+|+++++.|.+.|+. ......+...+.+|.++++.+.++ ++ ++|.||=+
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~--~a~~vi~~ 71 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIR--NFEYVIVA 71 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGG--GCSEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCc--cccEEEEE
Confidence 47899985 99999999999999984 001122334558999999999887 44 48888733
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.31 E-value=0.0011 Score=54.12 Aligned_cols=26 Identities=19% Similarity=0.341 Sum_probs=23.5
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|+||.|.||||++|..|++.|.++.+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~ 26 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPH 26 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTT
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCC
Confidence 56999999999999999999998743
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=96.24 E-value=0.012 Score=45.82 Aligned_cols=97 Identities=15% Similarity=0.208 Sum_probs=56.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCHHHHH------------HHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNLESTQ------------QLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~~~~~------------~~~~~~~~d~Vih 65 (358)
+||.|+|+ |.+|+.++-.|..++.. ....++. ...|+.+...+. +.+. +.|+||-
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~---dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~--~advvvi 75 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELG---DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTA--NSDVIVV 75 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCS---EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGT--TCSEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcc---eEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhc--CCCEEEE
Confidence 58999996 99999999988876531 1111100 011111111100 1122 6899999
Q ss_pred cccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEee
Q psy7590 66 LAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCL 110 (358)
Q Consensus 66 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~S 110 (358)
+|+... ..........+.|..-.+.+.+...+.+.+.++.+-
T Consensus 76 tag~~~---~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivv 117 (142)
T d1uxja1 76 TSGAPR---KPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV 117 (142)
T ss_dssp CCSCC------------CHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred eeeccC---CcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEe
Confidence 998653 122445567889999999999999998876555443
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=96.22 E-value=0.0027 Score=50.97 Aligned_cols=84 Identities=12% Similarity=0.111 Sum_probs=50.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc-c-------CCCCceeee------cccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK-R-------DDETWIFVS------SKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~-~-------~~~~~~~~~------~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
.+||+|.|++|.+|+.|++.+++... . ......... ....++.-..++..+++ .+|+||.+..+
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~--~~DViIDFs~p 81 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DFDVFIDFTRP 81 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhc--ccceEEEeccH
Confidence 46899999999999999999998642 1 111000000 00011111122334455 59999987443
Q ss_pred cCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 70 VGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 70 ~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
.++...+++|.+.+++ +|.-
T Consensus 82 -------------------~~~~~~~~~a~~~~~~-~ViG 101 (162)
T d1diha1 82 -------------------EGTLNHLAFCRQHGKG-MVIG 101 (162)
T ss_dssp -------------------HHHHHHHHHHHHTTCE-EEEC
T ss_pred -------------------HHHHHHHHHHHhccce-eEEe
Confidence 2455688999999974 6633
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.10 E-value=0.0045 Score=48.65 Aligned_cols=54 Identities=15% Similarity=0.252 Sum_probs=39.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
|+||+|+||.|.+|+.+++.|.+.|| +....|..........++ ++|.++.+.-
T Consensus 9 ~~kI~iIGg~G~mG~~la~~L~~~G~---------~V~~~d~~~~~~~~~~~~--~~~~v~~~~~ 62 (152)
T d2pv7a2 9 IHKIVIVGGYGKLGGLFARYLRASGY---------PISILDREDWAVAESILA--NADVVIVSVP 62 (152)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTC---------CEEEECTTCGGGHHHHHT--TCSEEEECSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHHcCC---------CcEecccccccccchhhh--hccccccccc
Confidence 56999999999999999999999987 112335555555555666 5888886543
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.06 E-value=0.0077 Score=47.96 Aligned_cols=90 Identities=19% Similarity=0.113 Sum_probs=59.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHH------HHH-----------------HHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLE------STQ-----------------QLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~------~~~-----------------~~~~~~~~d 61 (358)
.||.|+|+ |.+|++++..|+..+.-. +.. -.|..... ++. +.+. ++|
T Consensus 20 ~KI~IIGa-G~VG~~~A~~l~~~~l~~--elv-----L~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~--~ad 89 (159)
T d2ldxa1 20 CKITVVGV-GDVGMACAISILLKGLAD--ELA-----LVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSA--NSK 89 (159)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTSCS--EEE-----EECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGT--TEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCC--EEE-----EEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhc--ccc
Confidence 48999995 999999999999887621 011 11221100 000 1222 589
Q ss_pred EEEEcccccCCccccccchhhHHHHHHHHHHHHHHHHHhcCCCEEE
Q psy7590 62 HVIHLAAMVGGLFHNMSHNLDFFRVNMKINDNVLDTSYKQGVKKVV 107 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V 107 (358)
+||-+|+... ....+....++.|....+.+.+...+++.+-++
T Consensus 90 ivvitag~~~---~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~iv 132 (159)
T d2ldxa1 90 LVIITAGARM---VSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKI 132 (159)
T ss_dssp EEEECCSCCC---CTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEE
T ss_pred EEEEeccccc---CCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEE
Confidence 9999888654 223455567888999999999999988866444
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.03 E-value=0.0019 Score=52.56 Aligned_cols=26 Identities=19% Similarity=0.321 Sum_probs=23.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|+||.|+||||++|..|++.|.++.+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~ 26 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPE 26 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCC
Confidence 56999999999999999999987654
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=95.91 E-value=0.025 Score=44.14 Aligned_cols=95 Identities=16% Similarity=0.121 Sum_probs=58.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHH------HHH-----------------HHHhccCCc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLE------STQ-----------------QLFSKYKPT 61 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~------~~~-----------------~~~~~~~~d 61 (358)
+||.|+|+ |.+|+.++..|+.++.-. +.+-.|+.... ++. +.++ ++|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~-------elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~--~ad 71 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVAD-------DYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALA--DAD 71 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCS-------EEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGT--TCS
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCc-------eEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhc--ccc
Confidence 68999995 999999999999876411 11112221110 111 1223 589
Q ss_pred EEEEcccccCCcccc-ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 62 HVIHLAAMVGGLFHN-MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 62 ~Vih~a~~~~~~~~~-~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
+||-+|+........ ..+-....+.|..-.+.+.+.+++.+.+.++.+
T Consensus 72 iVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aiviv 120 (146)
T d1hyha1 72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV 120 (146)
T ss_dssp EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred EEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 999998864311111 122345788899999999999999987655543
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.80 E-value=0.0071 Score=45.13 Aligned_cols=59 Identities=12% Similarity=0.188 Sum_probs=45.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----CCC--Cc--eeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----DDE--TW--IFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~~~--~~--~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
.||.|+| +|++|+-++....+.|++ +.. .. ..-.++.+|+.|.+.+.+.....++|+|-
T Consensus 12 ~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 12 TRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIV 79 (111)
T ss_dssp CEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence 5899999 799999999999999984 111 11 11245579999999999988766789886
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.63 E-value=0.0044 Score=49.12 Aligned_cols=24 Identities=33% Similarity=0.545 Sum_probs=21.7
Q ss_pred EEEEEcCCChhHHHHHHHHHHccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||.|+||||++|..|++.|.++.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999999999999999988753
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=95.39 E-value=0.0092 Score=47.49 Aligned_cols=60 Identities=17% Similarity=0.215 Sum_probs=40.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CC-------CCceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DD-------ETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~-------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
.|+|+|.|| |.+|+++++.|.++|+. +. ...........+..+.......+. ..|.++.+
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~i~~ 74 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA--KHDLVISL 74 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT--TSSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhh--ccceeEee
Confidence 369999996 99999999999999983 10 111111222345566677777776 47777754
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.38 E-value=0.028 Score=42.92 Aligned_cols=84 Identities=20% Similarity=0.158 Sum_probs=51.2
Q ss_pred CCEEEEEcCC---ChhHHHHHHHHHHcc-cc---CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccc
Q psy7590 4 EKIILVTGGT---GLVGKAIEKIVKEEE-KR---DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHN 76 (358)
Q Consensus 4 ~~~VlItGat---G~lG~~l~~~L~~~g-~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~ 76 (358)
.++|+|+||| |..|..+.+.|++.+ ++ -+++...+ .+ +.-..++.++-. .+|.++-+..
T Consensus 8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i---~G-~~~y~sl~dlp~--~vDlvvi~vp-------- 73 (129)
T d2csua1 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV---QG-VKAYKSVKDIPD--EIDLAIIVVP-------- 73 (129)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE---TT-EECBSSTTSCSS--CCSEEEECSC--------
T ss_pred CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc---CC-eEeecchhhcCC--CCceEEEecC--------
Confidence 4689999998 999999999988654 21 01111111 10 011112222222 5898885422
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Q psy7590 77 MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLST 112 (358)
Q Consensus 77 ~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~ 112 (358)
-..+..+++.|.+.|++.++.+|+.
T Consensus 74 -----------~~~~~~~~~~~~~~g~~~~vi~s~G 98 (129)
T d2csua1 74 -----------KRFVKDTLIQCGEKGVKGVVIITAG 98 (129)
T ss_dssp -----------HHHHHHHHHHHHHHTCCEEEECCCS
T ss_pred -----------hHHhHHHHHHHHHcCCCEEEEeccc
Confidence 1244468899999999988877775
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=95.31 E-value=0.0049 Score=50.35 Aligned_cols=28 Identities=29% Similarity=0.491 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 2 AEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 2 ~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
++..||.|.||||++|..|++.|.++.+
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~ 30 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQ 30 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSS
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCC
Confidence 3456899999999999999999998754
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.24 E-value=0.0053 Score=49.41 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=23.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|||.|+||+|.+|++|++.|.+.|+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~ 25 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGH 25 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCC
Confidence 5899999999999999999999987
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.13 E-value=0.11 Score=40.50 Aligned_cols=99 Identities=15% Similarity=0.160 Sum_probs=60.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccccCCCCceeeec-------ccccCCCHHHHH------------HHHhccCCcEEEE
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSS-------KEADLSNLESTQ------------QLFSKYKPTHVIH 65 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~-------~~~Dl~~~~~~~------------~~~~~~~~d~Vih 65 (358)
+||.|+|+ |.+|++++..|+..+. .....++. ...|+.+..++. +.+. ++|+||-
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l---~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~--~advvvi 77 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNL---GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLA--GADVVIV 77 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC---CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGT--TCSEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCC---CeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccC--CCcEEEE
Confidence 58999995 9999999987766643 11111110 011111111110 1222 6899999
Q ss_pred cccccCCcccc--ccchhhHHHHHHHHHHHHHHHHHhcCCCEEEEe
Q psy7590 66 LAAMVGGLFHN--MSHNLDFFRVNMKINDNVLDTSYKQGVKKVVSC 109 (358)
Q Consensus 66 ~a~~~~~~~~~--~~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~ 109 (358)
+++....+... ..+-......|....+.+.+.+++.+.+.++.+
T Consensus 78 tag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aiviv 123 (150)
T d1t2da1 78 TAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV 123 (150)
T ss_dssp CCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99964321111 123567899999999999999999987755544
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.88 E-value=0.02 Score=45.43 Aligned_cols=25 Identities=20% Similarity=0.450 Sum_probs=22.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|++|+|.| .|.+|..|++.|.+.|+
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~ 25 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGF 25 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCC
Confidence 46899998 69999999999999875
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.37 E-value=0.01 Score=48.67 Aligned_cols=28 Identities=18% Similarity=0.337 Sum_probs=25.8
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||.|+||+|.| +|-.|.+++..|.+.|+
T Consensus 4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~ 31 (189)
T d1n1ea2 4 LLYLNKAVVFG-SGAFGTALAMVLSKKCR 31 (189)
T ss_dssp CCCEEEEEEEC-CSHHHHHHHHHHHTTEE
T ss_pred cceeceEEEEC-CCHHHHHHHHHHHHcCC
Confidence 78888999999 69999999999999987
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=93.79 E-value=0.066 Score=44.75 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=42.3
Q ss_pred CCEEEEEcC----------------CChhHHHHHHHHHHcccc-----C--C-CCceeeecccccCCCHHHHHHHHhc--
Q psy7590 4 EKIILVTGG----------------TGLVGKAIEKIVKEEEKR-----D--D-ETWIFVSSKEADLSNLESTQQLFSK-- 57 (358)
Q Consensus 4 ~~~VlItGa----------------tG~lG~~l~~~L~~~g~~-----~--~-~~~~~~~~~~~Dl~~~~~~~~~~~~-- 57 (358)
.|+||||+| ||..|.+|++++..+|.. . . .....+.. ..+...+++.+.+..
T Consensus 6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p~~~~~--~~~~t~~~m~~~~~~~~ 83 (223)
T d1u7za_ 6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTPPFVKR--VDVMTALEMEAAVNASV 83 (223)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCCTTEEE--EECCSHHHHHHHHHHHG
T ss_pred CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCccccccc--ceehhhHHHHHHHHhhh
Confidence 468999964 789999999999999984 1 1 11111211 223344444444321
Q ss_pred cCCcEEEEcccccC
Q psy7590 58 YKPTHVIHLAAMVG 71 (358)
Q Consensus 58 ~~~d~Vih~a~~~~ 71 (358)
.++|++|++|+...
T Consensus 84 ~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 84 QQQNIFIGCAAVAD 97 (223)
T ss_dssp GGCSEEEECCBCCS
T ss_pred ccceeEeeeechhh
Confidence 15899999999865
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.52 E-value=0.1 Score=40.92 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=23.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|+||.+.| .|.+|+.+++.|++.|+
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~ 25 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGY 25 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTC
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCC
Confidence 46899998 89999999999999988
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=93.38 E-value=0.02 Score=45.47 Aligned_cols=64 Identities=19% Similarity=0.328 Sum_probs=43.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHcccc-------CCCCce-eeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEKR-------DDETWI-FVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~~~-~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
+.++|||+|+ |-+|..+++.|.+.|.. +..+.. ...-..+...+.+++.+.+. ++|+||.+.+.
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~--~~Divi~atss 94 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLA--RSDVVVSATAA 94 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHH--TCSEEEECCSS
T ss_pred ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhc--cCCEEEEecCC
Confidence 3579999996 99999999999998863 111111 01111233445567778888 59999988664
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=92.97 E-value=0.12 Score=40.22 Aligned_cols=55 Identities=20% Similarity=0.294 Sum_probs=40.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
|++|.|.|+||-||...+.-+.+.. .+. .+....+ -.+.+.+.+...+++|..|+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~----d~f-~v~~Lsa-~~N~~~L~~q~~~f~pk~v~ 55 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNP----EHF-RVVALVA-GKNVTRMVEQCLEFSPRYAV 55 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCT----TTE-EEEEEEE-SSCHHHHHHHHHHHCCSEEE
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCC----CCc-EEEEEEe-cCcHHHHHHHHHHHhhcccc
Confidence 5689999999999999998887652 122 2222233 35788888888888899887
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=92.90 E-value=0.066 Score=41.62 Aligned_cols=24 Identities=13% Similarity=0.155 Sum_probs=22.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|||.|+| .|.+|+.|++.|++.|+
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~ 24 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGV 24 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCC
Confidence 5899998 79999999999999987
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=92.86 E-value=0.079 Score=41.59 Aligned_cols=24 Identities=25% Similarity=0.401 Sum_probs=21.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|||.|.| .|.+|+.+++.|.+.|+
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~ 24 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGH 24 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCC
Confidence 5899998 59999999999999987
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.18 E-value=0.11 Score=41.24 Aligned_cols=64 Identities=25% Similarity=0.222 Sum_probs=39.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCce-----eeecccccCCCH---HHHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWI-----FVSSKEADLSNL---ESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~-----~~~~~~~Dl~~~---~~~~~~~~~~~~d~Vih~a~ 68 (358)
..+|||+||+|-+|...++.++..|.+ ...+.. +... ..|..++ +.+.+.....++|+||++.+
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~-vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g 103 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA 103 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccc-cccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence 358999999999999999999888863 111000 1111 1233333 34444444457999998866
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=91.94 E-value=0.09 Score=41.35 Aligned_cols=25 Identities=20% Similarity=0.356 Sum_probs=19.3
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHH
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKE 26 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~ 26 (358)
|.+.+||.|+| +|.+|..+...+++
T Consensus 1 M~kkirvaIIG-aG~ig~~~~~~~l~ 25 (157)
T d1nvmb1 1 MNQKLKVAIIG-SGNIGTDLMIKVLR 25 (157)
T ss_dssp CCSCEEEEEEC-CSHHHHHHHHHHHH
T ss_pred CCCCcEEEEEc-CcHHHHHHHHHHHh
Confidence 78878999999 89999875544443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=91.82 E-value=0.21 Score=39.78 Aligned_cols=65 Identities=18% Similarity=0.171 Sum_probs=41.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc------CCCCce-----eee--cccccCCCHHHHHHHHhccCCcEEEEccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR------DDETWI-----FVS--SKEADLSNLESTQQLFSKYKPTHVIHLAA 68 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~-----~~~--~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~ 68 (358)
..+|||+||+|-+|...++..+..|.+ +..+.. +.. +..-|-...+.+.+.....++|+||++.+
T Consensus 30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG 107 (182)
T d1v3va2 30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 107 (182)
T ss_dssp SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence 358999999999999999999988863 111110 010 11122223344455555557999999866
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=91.76 E-value=0.21 Score=38.81 Aligned_cols=55 Identities=15% Similarity=0.302 Sum_probs=40.7
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVI 64 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vi 64 (358)
|++|.|.|+||-||....+-+.+... +. .+....+. .|.+.+.+...+++|..|+
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d----~f-~v~~lsa~-~N~~~L~~q~~ef~Pk~v~ 56 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLD----RY-QVIALTAN-RNVKDLADAAKRTNAKRAV 56 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGG----GE-EEEEEEES-SCHHHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCC----Cc-EEEEEEeC-CCHHHHHHHHHhhccccce
Confidence 67999999999999999988876521 22 22112333 5888888888888999887
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=91.59 E-value=0.21 Score=38.98 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=22.8
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
|||.|.| .|.+|+.+++.|++.|++
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~ 25 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYS 25 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCE
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCe
Confidence 5899998 799999999999999983
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.24 E-value=0.066 Score=43.80 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=22.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
|||.|.| .|++|..++..|.+.|+.
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~ 25 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHE 25 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCE
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCc
Confidence 5899997 899999999999999873
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=91.24 E-value=0.065 Score=41.61 Aligned_cols=59 Identities=7% Similarity=-0.005 Sum_probs=44.6
Q ss_pred EEEEEcCCChhHHHHHHHHHHcccc-----CCC----------CceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEKR-----DDE----------TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~~-----~~~----------~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
+|+|+|. |-+|..+++.|.+.|+. ..+ ...++.++.||.++++.+.++--+ ++++||-+
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~-~a~~vi~~ 78 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID-RCRAILAL 78 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT-TCSEEEEC
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccc-cCCEEEEc
Confidence 5899995 99999999999999874 111 012356679999999988777654 58988844
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=91.22 E-value=0.063 Score=42.67 Aligned_cols=27 Identities=22% Similarity=0.386 Sum_probs=23.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
..+|||+||+|-+|...++.++..|.+
T Consensus 28 g~~VlI~ga~G~vG~~aiqlak~~G~~ 54 (171)
T d1iz0a2 28 GEKVLVQAAAGALGTAAVQVARAMGLR 54 (171)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCE
T ss_pred CCEEEEEeccccchhhhhhhhcccccc
Confidence 458999999999999999999988863
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.19 E-value=0.23 Score=39.15 Aligned_cols=26 Identities=31% Similarity=0.371 Sum_probs=23.4
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
..+|||+||+|-+|...++.++..|.
T Consensus 29 g~~VlV~Ga~G~vG~~aiq~a~~~G~ 54 (174)
T d1yb5a2 29 GESVLVHGASGGVGLAACQIARAYGL 54 (174)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC
T ss_pred CCEEEEEeccccccccccccccccCc
Confidence 35899999999999999999988886
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=91.13 E-value=0.074 Score=41.49 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=23.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
|||+|+|+ |-+|..++..|.+.|++
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~ 25 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHE 25 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCc
Confidence 59999997 99999999999999983
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=90.26 E-value=1.4 Score=36.47 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=21.9
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|.| .|-+|++++..|...|.
T Consensus 31 ~~VliiG-~GglGs~va~~La~~Gv 54 (247)
T d1jw9b_ 31 SRVLIVG-LGGLGCAASQYLASAGV 54 (247)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTC
T ss_pred CCEEEEC-CCHHHHHHHHHHHHcCC
Confidence 4899999 67799999999999987
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=89.74 E-value=0.26 Score=38.85 Aligned_cols=25 Identities=24% Similarity=0.602 Sum_probs=21.1
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEE 27 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~ 27 (358)
|++ +||.|.| +|.+|+..++.|.+.
T Consensus 1 M~k-irvgiiG-~G~ig~~~~~~l~~~ 25 (170)
T d1f06a1 1 MTN-IRVAIVG-YGNLGRSVEKLIAKQ 25 (170)
T ss_dssp CCC-EEEEEEC-CSHHHHHHHHHHTTC
T ss_pred CCc-ceEEEEC-ChHHHHHHHHHHHhC
Confidence 443 6899999 699999999999875
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=89.71 E-value=0.31 Score=38.06 Aligned_cols=25 Identities=24% Similarity=0.244 Sum_probs=21.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
.+|+|+| +|-+|...++.++..|.+
T Consensus 28 ~~vlV~G-~G~vG~~~~~~ak~~Ga~ 52 (170)
T d1e3ja2 28 TTVLVIG-AGPIGLVSVLAAKAYGAF 52 (170)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCE
T ss_pred CEEEEEc-ccccchhhHhhHhhhccc
Confidence 4899997 699999999988888863
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=89.43 E-value=0.25 Score=39.24 Aligned_cols=24 Identities=21% Similarity=0.292 Sum_probs=21.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+|+ |-+|...++.++..|.
T Consensus 30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga 53 (182)
T d1vj0a2 30 KTVVIQGA-GPLGLFGVVIARSLGA 53 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTB
T ss_pred CEEEEECC-Cccchhheeccccccc
Confidence 58999996 8999999999998885
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=89.40 E-value=0.52 Score=37.37 Aligned_cols=24 Identities=21% Similarity=0.433 Sum_probs=22.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|||.|.| +|-.|.+|+..|.+.|+
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~ 24 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGN 24 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCC
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCC
Confidence 5899999 69999999999999886
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=89.37 E-value=0.72 Score=34.10 Aligned_cols=62 Identities=18% Similarity=0.116 Sum_probs=44.3
Q ss_pred CCEEEEEcCCC----------hhHHHHHHHHHHcccc-----CCCCc-----eeeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 4 EKIILVTGGTG----------LVGKAIEKIVKEEEKR-----DDETW-----IFVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG----------~lG~~l~~~L~~~g~~-----~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
.+||||.|+.. +.+.+.+++|.+.|++ +++.. ...+-++..-...+.+.+.++..+||.|
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD~lYfeplt~e~v~~Ii~~E~p~~i 83 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGV 83 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSEEECCCCSHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcCceEEccCCHHHHHHHHHHhCCCEE
Confidence 46999999744 7799999999999985 11111 1112224445578899999988899999
Q ss_pred EE
Q psy7590 64 IH 65 (358)
Q Consensus 64 ih 65 (358)
+-
T Consensus 84 i~ 85 (121)
T d1a9xa4 84 IV 85 (121)
T ss_dssp EC
T ss_pred Ee
Confidence 84
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=88.56 E-value=0.44 Score=37.97 Aligned_cols=24 Identities=21% Similarity=0.387 Sum_probs=21.2
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g 28 (358)
|-||.|-| .|.||+.+++.|.+++
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~ 24 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQP 24 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCT
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCC
Confidence 34899999 8999999999999875
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.41 E-value=0.62 Score=36.33 Aligned_cols=25 Identities=24% Similarity=0.337 Sum_probs=21.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
..+|+|+|+ |-+|...++.+...|.
T Consensus 27 gd~VlI~G~-G~iG~~~~~~a~~~G~ 51 (171)
T d1pl8a2 27 GHKVLVCGA-GPIGMVTLLVAKAMGA 51 (171)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred CCEEEEECC-CccHHHHHHHHHHcCC
Confidence 358999986 9999999999988886
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=88.34 E-value=0.48 Score=37.63 Aligned_cols=63 Identities=16% Similarity=0.145 Sum_probs=44.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc-------CCCCce-------------eeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR-------DDETWI-------------FVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~-------~~~~~~-------------~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
.++|+|+|+ |-.|++++..|.+.|.. ...+.. .......++.+.+.+...+. .+|.|
T Consensus 18 ~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~dii 94 (182)
T d1vi2a1 18 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA--SADIL 94 (182)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--TCSEE
T ss_pred CCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--cccee
Confidence 468999995 78899999999998752 211111 01122457778888888877 58999
Q ss_pred EEcccc
Q psy7590 64 IHLAAM 69 (358)
Q Consensus 64 ih~a~~ 69 (358)
|++...
T Consensus 95 IN~Tp~ 100 (182)
T d1vi2a1 95 TNGTKV 100 (182)
T ss_dssp EECSST
T ss_pred ccccCC
Confidence 998654
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=88.30 E-value=0.32 Score=36.47 Aligned_cols=63 Identities=22% Similarity=0.296 Sum_probs=45.7
Q ss_pred CCEEEEEcCCC----------hhHHHHHHHHHHcccc-----CCCCce-----eeecccccCCCHHHHHHHHhccCCcEE
Q psy7590 4 EKIILVTGGTG----------LVGKAIEKIVKEEEKR-----DDETWI-----FVSSKEADLSNLESTQQLFSKYKPTHV 63 (358)
Q Consensus 4 ~~~VlItGatG----------~lG~~l~~~L~~~g~~-----~~~~~~-----~~~~~~~Dl~~~~~~~~~~~~~~~d~V 63 (358)
-+||||.|+.. +.+.+.+++|.+.|++ +++... ..+.++..-...+.+.+.++..+||.|
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD~lYfePlt~e~v~~Ii~~E~pd~i 86 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAV 86 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcceeeeecCCHHHHHHHHHHhCcCCe
Confidence 46999999744 6799999999999995 111111 112234455688999999998899999
Q ss_pred EEc
Q psy7590 64 IHL 66 (358)
Q Consensus 64 ih~ 66 (358)
+-.
T Consensus 87 l~~ 89 (127)
T d1a9xa3 87 LPT 89 (127)
T ss_dssp ECS
T ss_pred EEE
Confidence 844
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=88.24 E-value=0.35 Score=36.92 Aligned_cols=80 Identities=19% Similarity=0.103 Sum_probs=50.0
Q ss_pred CCEEEEEcCC---ChhHHHHHHHHHHccccCCCCceeeecccccCC---CHHHHHHHHhccCCcEEEEcccccCCccccc
Q psy7590 4 EKIILVTGGT---GLVGKAIEKIVKEEEKRDDETWIFVSSKEADLS---NLESTQQLFSKYKPTHVIHLAAMVGGLFHNM 77 (358)
Q Consensus 4 ~~~VlItGat---G~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~ 77 (358)
.++|+|+|+| +-.|..+++.|++.|++ ...+......+. -..++.++-. .+|.|+-+..
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~----v~pVnP~~~~i~G~~~~~sl~dlp~--~iD~v~i~vp--------- 83 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYD----VYPVNPKYEEVLGRKCYPSVLDIPD--KIEVVDLFVK--------- 83 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE----EEEECTTCSEETTEECBSSGGGCSS--CCSEEEECSC---------
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCE----EEEECCcccccCCCcccccccccCc--cceEEEEEeC---------
Confidence 4689999998 88999999999999984 222211111111 1222333333 4888775422
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcCCCEEEE
Q psy7590 78 SHNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108 (358)
Q Consensus 78 ~~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~ 108 (358)
-..+..+++.|.+.|++.+++
T Consensus 84 ----------~~~~~~~~~e~~~~g~k~v~~ 104 (139)
T d2d59a1 84 ----------PKLTMEYVEQAIKKGAKVVWF 104 (139)
T ss_dssp ----------HHHHHHHHHHHHHHTCSEEEE
T ss_pred ----------HHHHHHHHHHHHHhCCCEEEE
Confidence 224556888888889986654
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=88.17 E-value=0.28 Score=36.70 Aligned_cols=87 Identities=10% Similarity=0.092 Sum_probs=50.9
Q ss_pred EEEEEcCCChhHHHHHHHHHHc-ccc------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCcccccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEE-EKR------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~-g~~------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 78 (358)
+|+|.| +|.+|+.|++++... +++ ......+-.....-+..++.+.+..++ .++.++-+..
T Consensus 5 ~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I~Gi~V~~~~~l~~~~~~-~i~iai~~i~---------- 72 (126)
T d2dt5a2 5 GLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPG-RIEIALLTVP---------- 72 (126)
T ss_dssp EEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTT-TCCEEEECSC----------
T ss_pred eEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEECCEEEecHHHHHHHHhh-cccEEEEeCC----------
Confidence 799999 699999999887533 442 122111111111122345567776665 4665553321
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEEeeccc
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVSCLSTC 113 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~~SS~~ 113 (358)
-...+.+++.|.+.|++.+.-++...
T Consensus 73 ---------~~~~~~I~d~l~~~gIk~I~~f~~~~ 98 (126)
T d2dt5a2 73 ---------REAAQKAADLLVAAGIKGILNFAPVV 98 (126)
T ss_dssp ---------HHHHHHHHHHHHHHTCCEEEECSSSC
T ss_pred ---------HHHHHHHHHHHHHcCCCEEeecCcee
Confidence 12334688888889998887766553
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=87.95 E-value=0.59 Score=36.91 Aligned_cols=25 Identities=24% Similarity=0.542 Sum_probs=21.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|++|.|-| .|.||+.+++.|++++.
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~d 25 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDD 25 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSS
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCC
Confidence 56899998 89999999999987764
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.91 E-value=0.4 Score=38.60 Aligned_cols=24 Identities=33% Similarity=0.635 Sum_probs=22.4
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
+||.|.|| |.+|+.++..+...|+
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~ 28 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGH 28 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTC
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCC
Confidence 59999996 9999999999999987
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=87.87 E-value=0.46 Score=34.98 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=48.7
Q ss_pred CEEEEEcCC---ChhHHHHHHHHHHccccCCCCceeeecccc---cCCCHHHHHHHHhccCCcEEEEcccccCCcccccc
Q psy7590 5 KIILVTGGT---GLVGKAIEKIVKEEEKRDDETWIFVSSKEA---DLSNLESTQQLFSKYKPTHVIHLAAMVGGLFHNMS 78 (358)
Q Consensus 5 ~~VlItGat---G~lG~~l~~~L~~~g~~~~~~~~~~~~~~~---Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~ 78 (358)
|+|.|+|+| +-.|..+.+.|++.|++ ...+..... .+.-..++.++-+ .+|.++-+..
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~----V~pVnP~~~~i~G~~~y~sl~~lp~--~~D~vvi~vp---------- 65 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFE----VLPVNPNYDEIEGLKCYRSVRELPK--DVDVIVFVVP---------- 65 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE----EEEECTTCSEETTEECBSSGGGSCT--TCCEEEECSC----------
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCE----EEEEccccccccCccccccchhccc--cceEEEEEeC----------
Confidence 689999998 78999999999999984 111111111 1112223333333 4888874422
Q ss_pred chhhHHHHHHHHHHHHHHHHHhcCCCEEEE
Q psy7590 79 HNLDFFRVNMKINDNVLDTSYKQGVKKVVS 108 (358)
Q Consensus 79 ~~~~~~~~nv~~~~~ll~aa~~~~v~r~V~ 108 (358)
-..+..+++.|.+.|++.+++
T Consensus 66 ---------~~~~~~~l~~~~~~g~k~v~~ 86 (116)
T d1y81a1 66 ---------PKVGLQVAKEAVEAGFKKLWF 86 (116)
T ss_dssp ---------HHHHHHHHHHHHHTTCCEEEE
T ss_pred ---------HHHHHHHHHHHHhcCCceEEe
Confidence 123445778888999986653
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=87.15 E-value=0.35 Score=38.69 Aligned_cols=26 Identities=23% Similarity=0.284 Sum_probs=23.3
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
.+||.|+|| |.+|+.++..++..|++
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~ 29 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTP 29 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCe
Confidence 468999996 99999999999999973
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=87.06 E-value=0.12 Score=41.32 Aligned_cols=65 Identities=15% Similarity=0.158 Sum_probs=37.6
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc------CCCCceeeecccc----cCCC-HHHHHHHHhccCCcEEEEcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR------DDETWIFVSSKEA----DLSN-LESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~------~~~~~~~~~~~~~----Dl~~-~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
.+|||+||+|-+|...++.....|.+ +..+...+...-+ |..+ .++........++|+||++.+-
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg 108 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 108 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred CEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCCc
Confidence 47999999999999999999998874 2222221111111 1111 1222234444579999998764
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.05 E-value=0.32 Score=45.73 Aligned_cols=24 Identities=13% Similarity=0.016 Sum_probs=21.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+|+ |-+|..+++.|.-.|.
T Consensus 26 s~VlvvG~-gglG~Ei~knLvl~GV 49 (529)
T d1yova1 26 AHVCLINA-TATGTEILKNLVLPGI 49 (529)
T ss_dssp CEEEECCC-SHHHHHHHHHHHTTTC
T ss_pred CCEEEECC-CHHHHHHHHHHHHhcC
Confidence 48999996 6799999999998886
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=85.26 E-value=0.58 Score=36.83 Aligned_cols=65 Identities=15% Similarity=-0.035 Sum_probs=38.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc-----C--CCCceeeecc----cccCCC---HHHHHHHHhccCCcEEEEccccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR-----D--DETWIFVSSK----EADLSN---LESTQQLFSKYKPTHVIHLAAMV 70 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~-----~--~~~~~~~~~~----~~Dl~~---~~~~~~~~~~~~~d~Vih~a~~~ 70 (358)
.+|+|.|+ |-+|...++.++..|.. + ..+....+-. ..|..+ .+.+.+.....++|+||.+++..
T Consensus 29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~~ 107 (174)
T d1jqba2 29 SSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGS 107 (174)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSSCT
T ss_pred CEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccCCH
Confidence 47999985 99999999999988752 1 1111111100 112222 34455555555799999997753
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=85.24 E-value=0.8 Score=35.08 Aligned_cols=24 Identities=29% Similarity=0.293 Sum_probs=21.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|||.+.| +|.+|++|++.|++.++
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~ 24 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPH 24 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSC
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCC
Confidence 5899998 89999999999998876
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=84.90 E-value=0.33 Score=33.14 Aligned_cols=25 Identities=20% Similarity=0.283 Sum_probs=22.8
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||+|.|.| +|++|+-++.+-.+.|+
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~ 25 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGI 25 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTE
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCC
Confidence 57999999 79999999999999987
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=84.53 E-value=0.13 Score=38.62 Aligned_cols=60 Identities=10% Similarity=0.034 Sum_probs=42.3
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc----CCC-----CceeeecccccCCCHHHHHHHHhccCCcEEEEc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR----DDE-----TWIFVSSKEADLSNLESTQQLFSKYKPTHVIHL 66 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~----~~~-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~ 66 (358)
|.|+|+| .|-+|..+++.|...+.. ... ...++.++.||.++++.+.++--. +++.+|-+
T Consensus 1 kHivI~G-~g~~g~~l~~~L~~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~-~A~~vi~~ 69 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELRGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVR-GARAVIVN 69 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSCGGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCT-TCSEEEEC
T ss_pred CEEEEEC-CCHHHHHHHHHHcCCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhh-cCcEEEEe
Confidence 3688998 599999999999765541 111 122445678999999988886544 58888843
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=84.44 E-value=4 Score=28.42 Aligned_cols=27 Identities=22% Similarity=0.131 Sum_probs=21.1
Q ss_pred CCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 3 EEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 3 ~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+++|.+.|..|--=+.|++.|+++|+
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~G~ 33 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNEGY 33 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTC
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhCCC
Confidence 356899987655544778999999998
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=84.05 E-value=0.85 Score=35.36 Aligned_cols=25 Identities=32% Similarity=0.429 Sum_probs=22.7
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|+|+|++|-+|...++.+...|.
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~g~ 53 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAVSG 53 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTC
T ss_pred CEEEEEeccccceeeeeeccccccc
Confidence 4899999999999999999998875
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.05 E-value=0.47 Score=37.77 Aligned_cols=25 Identities=20% Similarity=0.278 Sum_probs=22.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.+|||+||+|-+|+..++..+..|.
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga 56 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGC 56 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTC
T ss_pred CEEEEECCCchhhHHHHHHHHHcCC
Confidence 4799999999999999999888874
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=84.00 E-value=0.83 Score=36.01 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=20.5
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEE 28 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g 28 (358)
+||.|-| .|.||+.+++.|+++.
T Consensus 3 irIaING-fGRIGR~v~Ral~~~~ 25 (172)
T d2czca2 3 VKVGVNG-YGTIGKRVAYAVTKQD 25 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCT
T ss_pred EEEEEEC-CCHHHHHHHHHHHhCC
Confidence 4999999 7999999999998764
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.20 E-value=2 Score=38.88 Aligned_cols=24 Identities=25% Similarity=0.210 Sum_probs=21.2
Q ss_pred CEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.||||+|+ |-+|.++++.|...|.
T Consensus 38 ~kVlvvG~-GglG~ei~k~L~~~Gv 61 (426)
T d1yovb1 38 CKVLVIGA-GGLGCELLKNLALSGF 61 (426)
T ss_dssp CCEEEECS-STTHHHHHHHHHTTTC
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCC
Confidence 48999997 5599999999999887
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=83.02 E-value=0.31 Score=38.27 Aligned_cols=25 Identities=24% Similarity=0.203 Sum_probs=23.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR 30 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~ 30 (358)
|||.|+|+ |.+|..++..|.+.|++
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~ 26 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQS 26 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCE
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCE
Confidence 69999995 99999999999999983
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=82.97 E-value=0.47 Score=32.23 Aligned_cols=26 Identities=27% Similarity=0.382 Sum_probs=23.0
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
.++|||+||+|-+|...++.++..|.
T Consensus 32 ~~~vlI~gasGgVG~~aiQlak~~G~ 57 (77)
T d1o8ca2 32 DGEIVVTGASGGVGSTAVALLHKLGY 57 (77)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTC
T ss_pred CCcEEEEeCCCcHHHHHHHHHHHcCC
Confidence 35899999999999999998888875
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=82.65 E-value=2.2 Score=32.40 Aligned_cols=23 Identities=13% Similarity=0.195 Sum_probs=21.2
Q ss_pred EEEEEcCCChhHHHHHHHHHHccc
Q psy7590 6 IILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 6 ~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
||.+.| .|.+|+.+++.|++.|+
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~ 24 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFP 24 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSC
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCC
Confidence 689999 69999999999999887
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=82.62 E-value=1.1 Score=34.78 Aligned_cols=26 Identities=19% Similarity=0.167 Sum_probs=22.9
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
..+|||+||+|-+|..+++.++..|.
T Consensus 29 g~~Vlv~ga~g~vG~~~iqlak~~Ga 54 (179)
T d1qora2 29 DEQFLFHAAAGGVGLIACQWAKALGA 54 (179)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTC
T ss_pred CCEEEEEccccccchHHHHHHHHhCC
Confidence 35899999999999999999888764
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=82.07 E-value=0.47 Score=41.23 Aligned_cols=28 Identities=21% Similarity=0.325 Sum_probs=24.5
Q ss_pred CCCCCEEEEEcCCChhHHHHHHHHHHccc
Q psy7590 1 MAEEKIILVTGGTGLVGKAIEKIVKEEEK 29 (358)
Q Consensus 1 m~~~~~VlItGatG~lG~~l~~~L~~~g~ 29 (358)
|-.||+|+|+| +|.-|...+..|++++.
T Consensus 1 m~~~KrVaIIG-aG~sGl~~A~~L~~~~~ 28 (335)
T d2gv8a1 1 LPTIRKIAIIG-AGPSGLVTAKALLAEKA 28 (335)
T ss_dssp CCSCCEEEEEC-CSHHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEC-cCHHHHHHHHHHHHhCC
Confidence 66789999999 59999999999998763
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=82.05 E-value=1.7 Score=33.61 Aligned_cols=90 Identities=10% Similarity=0.084 Sum_probs=49.1
Q ss_pred CEEEEEcCCChhHHHHHHHHHHcccc---------CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccCCccc
Q psy7590 5 KIILVTGGTGLVGKAIEKIVKEEEKR---------DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVGGLFH 75 (358)
Q Consensus 5 ~~VlItGatG~lG~~l~~~L~~~g~~---------~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~~~~~ 75 (358)
++|+|.| +|.+|+..++.|.+.... ......... ..... ++.+++...++|+|+-+.....
T Consensus 8 ~kv~iIG-~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~e~l~~~~iD~V~I~tp~~~---- 77 (172)
T d1lc0a1 8 FGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGSLD--EVRQI---SLEDALRSQEIDVAYICSESSS---- 77 (172)
T ss_dssp EEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCEET--TEEBC---CHHHHHHCSSEEEEEECSCGGG----
T ss_pred cEEEEEc-CCHHHHHHHHHHHhCCCCcEEEEEeccchHHHHHhh--ccCcC---CHHHHHhCCCcchhhhcccccc----
Confidence 4899999 599999988888765321 111111110 00111 3556776657898874432211
Q ss_pred cccchhhHH------------HHHHHHHHHHHHHHHhcCCC
Q psy7590 76 NMSHNLDFF------------RVNMKINDNVLDTSYKQGVK 104 (358)
Q Consensus 76 ~~~~~~~~~------------~~nv~~~~~ll~aa~~~~v~ 104 (358)
+.+...... ..|+.-...+++++++.++.
T Consensus 78 H~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~ 118 (172)
T d1lc0a1 78 HEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (172)
T ss_dssp HHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred cccccccccccchhhhcCCCccccHHHHHHHHHHHHHcCCe
Confidence 101111111 13667778888888888754
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=81.08 E-value=1.9 Score=33.64 Aligned_cols=56 Identities=13% Similarity=0.075 Sum_probs=40.1
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHccccCCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccccC
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKRDDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAMVG 71 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~~~ 71 (358)
.++|+|.|-+..+|+-|+..|.++|. ... .++....+ +.+.+. ++|+||.+++...
T Consensus 37 GK~v~VIGrS~~VG~Pla~lL~~~ga----tVt-----~~h~~t~~-l~~~~~--~ADivI~a~G~p~ 92 (166)
T d1b0aa1 37 GLNAVVIGASNIVGRPMSMELLLAGC----TTT-----VTHRFTKN-LRHHVE--NADLLIVAVGKPG 92 (166)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTC----EEE-----EECSSCSC-HHHHHH--HCSEEEECSCCTT
T ss_pred cceEEEEeccccccHHHHHHHHHhhc----ccc-----ccccccch-hHHHHh--hhhHhhhhccCcc
Confidence 57999999999999999999998764 111 23333332 345555 3899999988654
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=81.04 E-value=0.66 Score=37.48 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=38.6
Q ss_pred CCEEEEEcCCChhHHHHHHHHHHcccc----CCCCceeeecccccCCCHHHHHHHHhccCCcEEEEcccc
Q psy7590 4 EKIILVTGGTGLVGKAIEKIVKEEEKR----DDETWIFVSSKEADLSNLESTQQLFSKYKPTHVIHLAAM 69 (358)
Q Consensus 4 ~~~VlItGatG~lG~~l~~~L~~~g~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~Vih~a~~ 69 (358)
.++|.|.| .|.||+.+++.|...|.+ +....... ..+.....++.+++.. +|+|+.+...
T Consensus 43 gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~---~~~~~~~~~l~~~l~~--sDii~~~~pl 106 (197)
T d1j4aa1 43 DQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPEL---EKKGYYVDSLDDLYKQ--ADVISLHVPD 106 (197)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHH---HHTTCBCSCHHHHHHH--CSEEEECSCC
T ss_pred CCeEEEec-ccccchhHHHhHhhhcccccccCccccccc---ccceeeeccccccccc--cccccccCCc
Confidence 46899999 899999999999988752 11110000 1112233467788884 8988766543
|