Psyllid ID: psy7767

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Protein Sequence
MVWTSKAESHQFSHVDHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYPDV
Secondary Structure (PSIPRED)
cEEEcccccEEEEEEccEEEEEEEccEEEEEEEEEccccEEEEEEccccEEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEEcccccccccEEEEEEcccccEEEEEEcccEEEEEcccccEEEEcccccccEEEEEEEcccEEEEEEccccEEEEcccccEEEEEEEccccccEEEEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEcccEEEEEcccccEEEEEEEcccccEEEEEEEccEEEEEEEEEcccccEEEcccccccEEEEEEEccEEEEEEEEEEEEEEEEccccccccccEcEEEEccccccEEEEEccEEEEEcccccccEEcccccEcccEEEcEccHHHHHHcccccEcEEEcccccEEEEEEEEcccccEEEEEEcccccccccccccc
Coil and Loop (DISEMBL)
mvwtskaeshqfshvdHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLtwkqshslsgrpdtltdvsdldgsnflqlvqwspvghdlifvkdnnlyqayddfrsinaltrdgikgvlfNGVADWVYEEEVFSstktlwfspdgsiLAYMKFNDARVHnmsyihygepgsktylypdv
Flexible Loop (DISEMBL)
mvwtskaeshqfshvDHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWkqshslsgrpdTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSyihygepgsktylypdv
Low Complexity Region (SEG)
MVWTSKAESHQFSHVDHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYPDV
Disordered region (IsUnstruct)
***********FSHVDHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSL*****TLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPG***Y*****
Disordered Region (DISOPRED)
MVW*S**ESHQFSHVDHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSK*YLYPDV
Disordered Region (DISEMBL)
***********FSHVDHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYPDV
Disordered Region (DISPRO)
MVWTSKAESHQFSHVDHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYPDV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVWTSKAESHQFSHVDHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYPDV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	200	2.2.26 [Sep-21-2011]
B1A4F7	776	Venom dipeptidyl peptidas	N/A	N/A	0.505	0.130	0.451	1e-22
P22411	766	Dipeptidyl peptidase 4 OS	yes	N/A	0.47	0.122	0.457	1e-17
B2D0J4	775	Venom dipeptidyl peptidas	no	N/A	0.56	0.144	0.376	3e-17
P27487	766	Dipeptidyl peptidase 4 OS	yes	N/A	0.47	0.122	0.436	1e-16
Q9N2I7	765	Dipeptidyl peptidase 4 OS	N/A	N/A	0.47	0.122	0.425	3e-16
P97321	761	Seprase OS=Mus musculus G	yes	N/A	0.46	0.120	0.413	7e-16
B6QVW4	899	Probable dipeptidyl-amino	N/A	N/A	0.51	0.113	0.412	9e-16
B0Y6C5	765	Probable dipeptidyl pepti	N/A	N/A	0.46	0.120	0.431	9e-16
P81425	765	Dipeptidyl peptidase 4 OS	no	N/A	0.47	0.122	0.425	2e-15
Q4WPH9	765	Probable dipeptidyl pepti	yes	N/A	0.46	0.120	0.421	2e-15

>sp|B1A4F7|VDDP4_VESVU Venom dipeptidyl peptidase 4 OS=Vespula vulgaris PE=1 SV=1

 Score =  106 bits (264), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 47/104 (45%), Positives = 69/104 (66%), Gaps = 3/104 (2%)

Query: 98  LQLVQWSPVGHDLIFVKDNNLYQ---AYDDFRSINALTRDGIKGVLFNGVADWVYEEEVF 154
           + L +W+P+  DLI++ DN++Y    + + F  +  +T DGI G+++NGV DWVYEEEV 
Sbjct: 158 IALAKWAPLTDDLIYILDNDIYYMRFSNNGFNDVQRVTYDGISGIVYNGVPDWVYEEEVL 217

Query: 155 SSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
             +  +WFSPDG+ LAY  F+D  V  + Y+HYGEPG+    YP
Sbjct: 218 QDSSAIWFSPDGNHLAYASFDDRNVQEILYLHYGEPGNLDDQYP 261

Venom dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. May process venom proteins into their activ forms and/or modulate the chemotactic activity of immune cells after the insect sting.
Vespula vulgaris (taxid: 7454)
EC: 3EC: .EC: 4EC: .EC: 1EC: 4EC: .EC: 5

>sp|P22411|DPP4_PIG Dipeptidyl peptidase 4 OS=Sus scrofa GN=DPP4 PE=1 SV=3

 Score = 89.7 bits (221), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 60/94 (63%)

Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q + WSPVGH L +V +N++Y   +   S   +T  G + V++NGV DWVYEEEVFS
Sbjct: 150 NNTQWITWSPVGHKLAYVWNNDIYVKNEPNLSSQRITWTGKENVIYNGVTDWVYEEEVFS 209

Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 210 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 243

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones (By similarity). Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.

Sus scrofa (taxid: 9823)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|B2D0J4|VDPP4_APIME Venom dipeptidyl peptidase 4 OS=Apis mellifera PE=1 SV=1

 Score = 88.2 bits (217), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 5/117 (4%)

Query: 85  TLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQA--YDDFRSINALTRDGIKGVLFN 142
           T TD+++ D    + L +WSP  + LI+V  N++Y    ++       +T  G+  ++FN
Sbjct: 150 TFTDIANGDR---IPLFKWSPTRNALIYVHKNDIYYQVFFEGGSDTRRITNTGVPDIVFN 206

Query: 143 GVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYPD 199
           G+ DWVYEEEV  S    W SPDG  LA+  FND  V ++    YG PG+    YP+
Sbjct: 207 GIPDWVYEEEVLGSPVAFWISPDGRHLAFATFNDTNVRDIVISKYGSPGNSRDQYPN 263

Venom dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. May process promelittin into its activ form and/or modulate the chemotactic activity of immune cells after the insect sting.

Apis mellifera (taxid: 7460)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|P27487|DPP4_HUMAN Dipeptidyl peptidase 4 OS=Homo sapiens GN=DPP4 PE=1 SV=2

 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)

Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 150 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 209

Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 210 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 243

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|Q9N2I7|DPP4_FELCA Dipeptidyl peptidase 4 OS=Felis catus GN=DPP4 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 59/94 (62%)

Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q + WSP GH L +V  N++Y   +   S + +T  G +  ++NG+ADWVYEEE+FS
Sbjct: 149 NNTQWITWSPEGHKLAYVWKNDVYVKNEPNSSSHRITWTGEENAIYNGIADWVYEEEIFS 208

Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP G+ LAY +FND +V  + Y  Y +
Sbjct: 209 AYSALWWSPKGTFLAYAQFNDTQVPLIEYSFYSD 242

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the. penultimate residue is proline.

Felis catus (taxid: 9685)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|P97321|SEPR_MOUSE Seprase OS=Mus musculus GN=Fap PE=2 SV=1

 Score = 83.6 bits (205), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 58/92 (63%)

Query: 98  LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSST 157
           +Q + WSPVG  L +V  NN+Y           +T  G +  +FNG+ DWVYEEE+ ++ 
Sbjct: 150 IQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITYTGRENRIFNGIPDWVYEEEMLATK 209

Query: 158 KTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
             LW+SPDG  LAY++FND+ +  ++Y +YG+
Sbjct: 210 YALWWSPDGKFLAYVEFNDSDIPIIAYSYYGD 241

In association with DPP4 is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM (By similarity). May have a role in tissue remodeling during development and wound healing, and contribute to invasiveness in malignant cancers.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|B6QVW4|DAPB_PENMQ Probable dipeptidyl-aminopeptidase B OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=dapB PE=3 SV=1

 Score = 83.6 bits (205), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 7/109 (6%)

Query: 98  LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSST 157
           +QL  WSP    ++F +DNNLY    D   ++ LT+DG K V FNGV DWVYEEEVF + 
Sbjct: 271 IQLASWSPQSDAVVFTRDNNLYLRKLDSDKVSQLTKDGGKDV-FNGVPDWVYEEEVFGTD 329

Query: 158 KTLWFSPDGSILAYMKFNDARVHNMSYIHY------GEPGSKTYLYPDV 200
            T W+S DG  +A+++ N++ V      +Y       +P +    YPDV
Sbjct: 330 STTWWSKDGKYVAFLRTNESMVPEFPIEYYMSRPSGKKPPAGLDKYPDV 378

Type IV dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.

Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) (taxid: 441960)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|B0Y6C5|DPP4_ASPFC Probable dipeptidyl peptidase 4 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=dpp4 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 93  DGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEE 152
           D S  +Q  QWSP G  + FV+DNN++   +   S + +T DG    LFNGV DW+YEEE
Sbjct: 139 DQSGDIQYAQWSPTGDAIAFVRDNNVFVWTN--ASTSQITNDGGPD-LFNGVPDWIYEEE 195

Query: 153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHY 187
           +      LWFSPDG+ LA+++FN+  V   +  +Y
Sbjct: 196 ILGDRFALWFSPDGAYLAFLRFNETGVPTFTVPYY 230

Extracellular dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Contributes to pathogenicity.

Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|P81425|DPP4_BOVIN Dipeptidyl peptidase 4 OS=Bos taurus GN=DPP4 PE=1 SV=3

 Score = 82.8 bits (203), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 57/94 (60%)

Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q + WS VGH L +V +N++Y   +       +T  G K V++NG+ DWVYEEEVFS
Sbjct: 149 NNTQWITWSSVGHKLAYVWNNDIYVKNEPNSPSQRITWTGKKDVIYNGITDWVYEEEVFS 208

Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+ + LAY +FND  V  + Y  Y +
Sbjct: 209 AYSALWWSPNSTFLAYAQFNDTEVPLIEYSFYSD 242

Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones. Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

>sp|Q4WPH9|DPP4_ASPFU Probable dipeptidyl peptidase 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dpp4 PE=3 SV=1

 Score = 82.4 bits (202), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 3/95 (3%)

Query: 93  DGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEE 152
           D S  +Q  QW+P G  + FV+DNN++   +   S + +T DG    LFNGV DW+YEEE
Sbjct: 139 DQSGDIQYAQWTPTGDAIAFVRDNNVFVWTN--ASTSQITNDGGPD-LFNGVPDWIYEEE 195

Query: 153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHY 187
           +      LWFSPDG+ LA+++FN+  V   +  +Y
Sbjct: 196 ILGDRFALWFSPDGAYLAFLRFNETGVPTFTVPYY 230

Extracellular dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Contributes to pathogenicity.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 4

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
91083961	767	PREDICTED: similar to dipeptidyl-peptida	0.54	0.140	0.490	2e-24
307211949	817	Dipeptidyl peptidase 4 [Harpegnathos sal	0.505	0.123	0.485	6e-22
110277461	775	dipeptidylpeptidase IV [Vespa basalis]	0.505	0.130	0.471	6e-22
260807407	915	hypothetical protein BRAFLDRAFT_66877 [B	0.46	0.100	0.537	3e-21
383864594	754	PREDICTED: venom dipeptidyl peptidase 4-	0.545	0.144	0.457	5e-21
313471718	776	RecName: Full=Venom dipeptidyl peptidase	0.505	0.130	0.451	5e-21
332024435	727	Dipeptidyl peptidase 4 [Acromyrmex echin	0.555	0.152	0.449	1e-20
307179774	757	Dipeptidyl peptidase 4 [Camponotus flori	0.495	0.130	0.475	6e-20
158288038	801	AGAP011584-PA [Anopheles gambiae str. PE	0.5	0.124	0.485	2e-19
195454797	805	GK10533 [Drosophila willistoni] gi|19417	0.525	0.130	0.443	2e-19

>gi|91083961|ref|XP_975053.1| PREDICTED: similar to dipeptidyl-peptidase [Tribolium castaneum] gi|270007979|gb|EFA04427.1| hypothetical protein TcasGA2_TC014727 [Tribolium castaneum]

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 53/108 (49%), Positives = 69/108 (63%)

Query: 91  DLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYE 150
           D++  N+ Q  QW+P+GH L++V  NNLY   +      ALT +GI G+++NGV DWVYE
Sbjct: 131 DIEDKNYTQYAQWAPIGHGLVYVYLNNLYYLKEPSGEPIALTTNGIPGIIYNGVPDWVYE 190

Query: 151 EEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
           EEV  +   LWFSPDG  LA+  FNDA V N +Y  YG PG  +  YP
Sbjct: 191 EEVLGTGSALWFSPDGKQLAFAAFNDAEVKNFTYFTYGVPGVTSSQYP 238

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211949|gb|EFN87861.1| Dipeptidyl peptidase 4 [Harpegnathos saltator]

 Score =  109 bits (272), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 70/103 (67%), Gaps = 2/103 (1%)

Query: 98  LQLVQWSPVGHDLIFVKDNNLYQ-AYDDFRS-INALTRDGIKGVLFNGVADWVYEEEVFS 155
           + L  W P+G +L++V+ N+++   + D +S +  LTR G  GV+FNG+ADWVYEEEVFS
Sbjct: 197 ISLATWLPIGSELVYVRANDIHHMVFKDGKSTVRRLTRSGKSGVVFNGIADWVYEEEVFS 256

Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
           S+  +W+SPDG  LA+  FND  V +M Y +YG PGS    YP
Sbjct: 257 SSSAIWYSPDGRYLAFATFNDTLVRDMEYTYYGAPGSLKDQYP 299

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110277461|gb|ABG57265.1| dipeptidylpeptidase IV [Vespa basalis]

 Score =  109 bits (272), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 49/104 (47%), Positives = 70/104 (67%), Gaps = 3/104 (2%)

Query: 98  LQLVQWSPVGHDLIFVKDNNLYQ---AYDDFRSINALTRDGIKGVLFNGVADWVYEEEVF 154
           + L +W+P+  DLI++ DN++Y    + + F  +  +T DGI G+++NGV DWVYEEEVF
Sbjct: 158 IALAKWAPLTDDLIYILDNDIYYMRFSNNGFNDVQRVTYDGIVGIVYNGVPDWVYEEEVF 217

Query: 155 SSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
             +  +WFSPDGS LAY  F+D  V  + Y+HYGEPG+    YP
Sbjct: 218 HRSSAMWFSPDGSHLAYASFDDRNVQEILYLHYGEPGNLVDQYP 261

Source: Vespa basalis

Species: Vespa basalis

Genus: Vespa

Family: Vespidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|260807407|ref|XP_002598500.1| hypothetical protein BRAFLDRAFT_66877 [Branchiostoma floridae] gi|229283773|gb|EEN54512.1| hypothetical protein BRAFLDRAFT_66877 [Branchiostoma floridae]

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 1/93 (1%)

Query: 98  LQLVQWSPVGHDLIFVKDNNLYQAYD-DFRSINALTRDGIKGVLFNGVADWVYEEEVFSS 156
           +Q   W+PVGH L+FV  NN+Y   D        +T DG++GV+FNGV DWVYEEEVFS+
Sbjct: 181 VQYAAWAPVGHKLVFVYKNNIYLKTDFSGNDSQPITTDGMEGVIFNGVPDWVYEEEVFST 240

Query: 157 TKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
             T+W+S DG++LA+ KFND +V  MS+ HYGE
Sbjct: 241 DHTIWWSSDGNLLAFAKFNDTQVPIMSFSHYGE 273

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|383864594|ref|XP_003707763.1| PREDICTED: venom dipeptidyl peptidase 4-like [Megachile rotundata]

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 54/118 (45%), Positives = 74/118 (62%), Gaps = 9/118 (7%)

Query: 85  TLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINA----LTRDGIKGVL 140
           T+T++S+ D    L L +WSP  + L++V++N++Y  Y DF   N+    LT  G  GV+
Sbjct: 128 TITNISNGDR---LLLAKWSPAKNALVYVRENDIY--YKDFSDTNSQERRLTHTGKPGVV 182

Query: 141 FNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
           FNG+ DWVYEEEV +S   LWFSPDG  LA++ FND  V ++    YG PG   Y YP
Sbjct: 183 FNGIPDWVYEEEVLASASALWFSPDGKHLAFITFNDTNVKDIVIPKYGTPGGIVYQYP 240

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|313471718|sp|B1A4F7.1|VDDP4_VESVU RecName: Full=Venom dipeptidyl peptidase 4; AltName: Full=Venom dipeptidyl peptidase IV; AltName: Allergen=Ves v 3; Flags: Precursor gi|167782086|gb|ACA00159.1| dipeptidylpeptidase IV preproprotein [Vespula vulgaris]

 Score =  106 bits (264), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/104 (45%), Positives = 69/104 (66%), Gaps = 3/104 (2%)

Query: 98  LQLVQWSPVGHDLIFVKDNNLYQ---AYDDFRSINALTRDGIKGVLFNGVADWVYEEEVF 154
           + L +W+P+  DLI++ DN++Y    + + F  +  +T DGI G+++NGV DWVYEEEV 
Sbjct: 158 IALAKWAPLTDDLIYILDNDIYYMRFSNNGFNDVQRVTYDGISGIVYNGVPDWVYEEEVL 217

Query: 155 SSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
             +  +WFSPDG+ LAY  F+D  V  + Y+HYGEPG+    YP
Sbjct: 218 QDSSAIWFSPDGNHLAYASFDDRNVQEILYLHYGEPGNLDDQYP 261

Source: Vespula vulgaris

Species: Vespula vulgaris

Genus: Vespula

Family: Vespidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332024435|gb|EGI64633.1| Dipeptidyl peptidase 4 [Acromyrmex echinatior]

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/118 (44%), Positives = 72/118 (61%), Gaps = 7/118 (5%)

Query: 84  DTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINA---LTRDGIKGVL 140
           DT  ++++     F+ L  WSP+G DL++V DN++Y    + RS N    LT  G   ++
Sbjct: 101 DTFEEIAN---ETFISLALWSPIGSDLVYVLDNDIYHMTFN-RSQNVVRRLTTSGEANIV 156

Query: 141 FNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
           FNG+ DWVYEEEVF S   +WFSP+G  LA+  FND  V +M+Y HYG  GS    YP
Sbjct: 157 FNGIPDWVYEEEVFGSATAMWFSPNGQHLAFATFNDTLVKDMAYFHYGTAGSLEDQYP 214

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307179774|gb|EFN67964.1| Dipeptidyl peptidase 4 [Camponotus floridanus]

 Score =  103 bits (256), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 2/101 (1%)

Query: 100 LVQWSPVGHDLIFVKDNNLYQAYDDFRS--INALTRDGIKGVLFNGVADWVYEEEVFSST 157
           L  WSP+G+DL++V DN++Y    +     +  LT+ G  GV++NGV DWVYEEEV  S 
Sbjct: 142 LALWSPIGNDLVYVHDNDIYHMIFNHEQTIVRRLTKSGKFGVIYNGVPDWVYEEEVLRSA 201

Query: 158 KTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
             +W+SPDG  LA+  FND  V +M+Y +YG PGS    YP
Sbjct: 202 VAMWYSPDGRYLAFATFNDTVVKDMAYFYYGVPGSFEDQYP 242

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158288038|ref|XP_309924.4| AGAP011584-PA [Anopheles gambiae str. PEST] gi|157019281|gb|EAA05700.5| AGAP011584-PA [Anopheles gambiae str. PEST]

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 1/101 (0%)

Query: 98  LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSST 157
           L LV+WSPVGH  +FV  NNLY           +T DG   V +NG+ DWVYEEEVFS+ 
Sbjct: 180 LNLVEWSPVGHSFVFVYQNNLYYRETPTSPEIQITTDGSPSV-YNGIPDWVYEEEVFSTN 238

Query: 158 KTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
              WFSPDG  +A+++FND     M    YG PG+  Y YP
Sbjct: 239 IATWFSPDGKRIAFIRFNDTETPLMKIPIYGPPGNPDYQYP 279

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195454797|ref|XP_002074409.1| GK10533 [Drosophila willistoni] gi|194170494|gb|EDW85395.1| GK10533 [Drosophila willistoni]

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 1/106 (0%)

Query: 93  DGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEE 152
           D   +L +VQWSPVG+ L+   D NLY   +   +  ALT D  +G + NG+ DWVYEEE
Sbjct: 171 DEQRYLSMVQWSPVGNALVINYDRNLYYKQNALDTEIALTNDS-EGAILNGIPDWVYEEE 229

Query: 153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
           VFSS    WF+P G+ LA+++F+D+  H +++ +YG+ G   Y YP
Sbjct: 230 VFSSNVATWFNPSGTQLAFIRFDDSSTHLINFPYYGDAGDLRYQYP 275

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
FB|FBgn0259175	1040	ome "omega" [Drosophila melano	0.51	0.098	0.466	1.9e-20
FB|FBgn0031741	745	CG11034 [Drosophila melanogast	0.78	0.209	0.380	1.5e-18
UNIPROTKB|F1NDP3	757	FAP "Uncharacterized protein"	0.885	0.233	0.329	2e-18
UNIPROTKB|F1NDK7	762	DPP4 "Uncharacterized protein"	0.615	0.161	0.387	2e-18
UNIPROTKB|J9P8B0	278	DPP4 "Uncharacterized protein"	0.47	0.338	0.436	2.2e-18
UNIPROTKB|P22411	766	DPP4 "Dipeptidyl peptidase 4"	0.47	0.122	0.457	3.3e-18
POMBASE|SPACUNK4.08	793	SPACUNK4.08 "dipeptidyl peptid	0.44	0.110	0.444	9.4e-18
UNIPROTKB|P27487	766	DPP4 "Dipeptidyl peptidase 4"	0.47	0.122	0.436	2.4e-17
UNIPROTKB|F1PP08	768	DPP4 "Uncharacterized protein"	0.47	0.122	0.436	3.1e-17
UNIPROTKB|Q9N2I7	765	DPP4 "Dipeptidyl peptidase 4"	0.47	0.122	0.425	3.9e-17

FB|FBgn0259175 ome "omega" [Drosophila melanogaster (taxid:7227)]

 Score = 254 (94.5 bits), Expect = 1.9e-20, P = 1.9e-20
 Identities = 48/103 (46%), Positives = 66/103 (64%)

Query:    96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
             ++L +VQWSPVG+ L+   D NLY          ALT D   G+L NG+ DWVYEEEVFS
Sbjct:   411 HYLSMVQWSPVGNALVINYDRNLYYKESALAQEIALTSDEQAGIL-NGIPDWVYEEEVFS 469

Query:   156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
             S    WF+P G+ LA++KF+D+  H +++ +YG+ G   Y YP
Sbjct:   470 SNVATWFNPSGTQLAFIKFDDSSTHLINFPYYGDAGDLRYQYP 512

GO:0008239 "dipeptidyl-peptidase activity" evidence=ISS;IDA

GO:0008236 "serine-type peptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

FB|FBgn0031741 CG11034 [Drosophila melanogaster (taxid:7227)]

 Score = 234 (87.4 bits), Expect = 1.5e-18, P = 1.5e-18
 Identities = 65/171 (38%), Positives = 90/171 (52%)

Query:    40 RC---LTWKQSEYWDYNLYLQRSTDIA---LKLSIRC-LTWKQSHSLSGRPD-----TLT 87
             RC   L +KQ  + + N Y+  +  ++    K+ IR  LT K  HS   + D     T T
Sbjct:    72 RCNHTLNFKQLHF-ELNNYVGATFSLSPDNTKILIRHNLTEKFRHSYIAQYDVFDIETNT 130

Query:    88 DVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADW 147
              V    G   LQ   WSP+   L +V  NN++  + +   I+ +T DG+ GV++NGV DW
Sbjct:   131 TVQIHKGEK-LQYCGWSPLRDRLAYVYLNNVFIHFSESLEIS-ITDDGVDGVVYNGVPDW 188

Query:   148 VYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTYLYP 198
             VYEEEV SS   +W+S DGS LA   FND  V   +Y  YG+  +  Y YP
Sbjct:   189 VYEEEVLSSGSAIWWSSDGSRLAVGFFNDTEVETFTYFLYGDGATTFYQYP 239

GO:0008239 "dipeptidyl-peptidase activity" evidence=ISS;IDA

GO:0008236 "serine-type peptidase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F1NDP3 FAP "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 233 (87.1 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 63/191 (32%), Positives = 100/191 (52%)

Query:     3 WTSKAES-HQFSHVDHKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTD 61
             W S +E  HQ +  D  I+  ++  Y+  T I         T KQ    +Y +   +   
Sbjct:    57 WVSDSEYLHQ-NQEDDIILFNVDMNYL--TTIMTNS-----TMKQVNASNYVMSSDKYF- 107

Query:    62 IALKLSIRCLTWKQSHSLSGRP-DTLTD--VSDLDGSNFLQLVQWSPVGHDLIFVKDNNL 118
             IAL+ +   L W+ S++ S    D +    V++    + +Q + WSPVGH L +V  NN+
Sbjct:   108 IALESNYSKL-WRYSYTASYHIYDLIYGGFVTENQLPHKIQYISWSPVGHKLAYVYQNNI 166

Query:   119 YQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDAR 178
             Y       +   LT DG +  +FNG+ DWVYEEE+ ++   LW+SP G  LAY++FND+ 
Sbjct:   167 YLKQSPREAPIKLTSDGKENEIFNGIPDWVYEEEMLATKYALWWSPSGKYLAYVQFNDSD 226

Query:   179 VHNMSYIHYGE 189
             +  + Y ++GE
Sbjct:   227 IPVIEYSYFGE 237

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0002020 "protease binding" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

UNIPROTKB|F1NDK7 DPP4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 233 (87.1 bits), Expect = 2.0e-18, P = 2.0e-18
 Identities = 50/129 (38%), Positives = 70/129 (54%)

Query:    73 WKQSHSLSGRPDTLTDVSDLDGS---NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSIN 129
             W+ S++ S         S LD +   N  Q + WSPVGH L +V +NN+Y       +  
Sbjct:   122 WRHSYTASYHIYDFNTSSILDDALLPNDTQYISWSPVGHKLAYVWNNNIYIKASPTAAPV 181

Query:   130 ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
              +T +G +  +FNG+ DWVYEEE+F S   LW+SP+G+ +AY  FND  V  + Y  Y E
Sbjct:   182 QITSNGKENKIFNGIPDWVYEEEMFGSHSALWWSPNGNFVAYAAFNDTEVPVIEYSFYSE 241

Query:   190 PGSKTYLYP 198
                 T  YP
Sbjct:   242 D---TLQYP 247

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0001666 "response to hypoxia" evidence=IEA

GO:0002020 "protease binding" evidence=IEA

GO:0005102 "receptor binding" evidence=IEA

GO:0008239 "dipeptidyl-peptidase activity" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030139 "endocytic vesicle" evidence=IEA

GO:0031295 "T cell costimulation" evidence=IEA

GO:0033632 "regulation of cell-cell adhesion mediated by integrin" evidence=IEA

GO:0042110 "T cell activation" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0043542 "endothelial cell migration" evidence=IEA

GO:0046581 "intercellular canaliculus" evidence=IEA

GO:0071438 "invadopodium membrane" evidence=IEA

UNIPROTKB|J9P8B0 DPP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 41/94 (43%), Positives = 59/94 (62%)

Query:    96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
             N  Q + WSP GH L +V +N++Y   +   S   +T +G + V++NG+ DWVYEEEVFS
Sbjct:   135 NNTQWITWSPEGHKLAYVWNNDVYVKNEPNISSQRITWNGKENVIYNGITDWVYEEEVFS 194

Query:   156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
             +   LW+SP G+ LAY +FND  V  + Y  Y +
Sbjct:   195 AYSALWWSPKGTFLAYAQFNDTEVPLIEYSFYSD 228

GO:0016020 "membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|P22411 DPP4 "Dipeptidyl peptidase 4" [Sus scrofa (taxid:9823)]

 Score = 231 (86.4 bits), Expect = 3.3e-18, P = 3.3e-18
 Identities = 43/94 (45%), Positives = 60/94 (63%)

Query:    96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
             N  Q + WSPVGH L +V +N++Y   +   S   +T  G + V++NGV DWVYEEEVFS
Sbjct:   150 NNTQWITWSPVGHKLAYVWNNDIYVKNEPNLSSQRITWTGKENVIYNGVTDWVYEEEVFS 209

Query:   156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
             +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct:   210 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 243

GO:0005102 "receptor binding" evidence=ISS

GO:0030027 "lamellipodium" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0008284 "positive regulation of cell proliferation" evidence=ISS

GO:0008239 "dipeptidyl-peptidase activity" evidence=ISS

GO:0071438 "invadopodium membrane" evidence=ISS

GO:0002020 "protease binding" evidence=ISS

GO:0043542 "endothelial cell migration" evidence=ISS

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=ISS

GO:0031295 "T cell costimulation" evidence=ISS

GO:0009986 "cell surface" evidence=ISS

GO:0030139 "endocytic vesicle" evidence=ISS

GO:0045121 "membrane raft" evidence=IEA

GO:0031258 "lamellipodium membrane" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

POMBASE|SPACUNK4.08 SPACUNK4.08 "dipeptidyl peptidase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 214 (80.4 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
 Identities = 40/90 (44%), Positives = 57/90 (63%)

Query:    98 LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSST 157
             + L +WSP GH L FV +N+LY   +D  ++  LT DG   V FNG+ DW+YEEEV SS 
Sbjct:   171 ISLAEWSPTGHQLSFVYNNDLYVRKND-GNVQRLTYDGTVDV-FNGLTDWIYEEEVLSSP 228

Query:   158 KTLWFSPDGSILAYMKFNDARVHNMSYIHY 187
              T+W+SPD   +A++K N++ +    Y  Y
Sbjct:   229 STIWWSPDSDKIAFLKLNESEIPTYHYPLY 258

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008239 "dipeptidyl-peptidase activity" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016485 "protein processing" evidence=ISO

UNIPROTKB|P27487 DPP4 "Dipeptidyl peptidase 4" [Homo sapiens (taxid:9606)]

 Score = 223 (83.6 bits), Expect = 2.4e-17, P = 2.4e-17
 Identities = 41/94 (43%), Positives = 59/94 (62%)

Query:    96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
             N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct:   150 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 209

Query:   156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
             +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct:   210 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 243

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IEA

GO:0046581 "intercellular canaliculus" evidence=IEA

GO:0031258 "lamellipodium membrane" evidence=IEA

GO:0045121 "membrane raft" evidence=IEA

GO:0008239 "dipeptidyl-peptidase activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009986 "cell surface" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042110 "T cell activation" evidence=IDA

GO:0008236 "serine-type peptidase activity" evidence=IDA

GO:0033632 "regulation of cell-cell adhesion mediated by integrin" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

GO:0030139 "endocytic vesicle" evidence=IDA

GO:0031295 "T cell costimulation" evidence=IDA

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=IDA

GO:0001666 "response to hypoxia" evidence=IDA

GO:0002020 "protease binding" evidence=IPI

GO:0071438 "invadopodium membrane" evidence=IDA

GO:0043542 "endothelial cell migration" evidence=IDA

GO:0008284 "positive regulation of cell proliferation" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0030027 "lamellipodium" evidence=IDA

GO:0016324 "apical plasma membrane" evidence=IDA

GO:0070062 "extracellular vesicular exosome" evidence=IDA

UNIPROTKB|F1PP08 DPP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 222 (83.2 bits), Expect = 3.1e-17, P = 3.1e-17
 Identities = 41/94 (43%), Positives = 59/94 (62%)

Query:    96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
             N  Q + WSP GH L +V +N++Y   +   S   +T +G + V++NG+ DWVYEEEVFS
Sbjct:   151 NNTQWITWSPEGHKLAYVWNNDVYVKNEPNISSQRITWNGKENVIYNGITDWVYEEEVFS 210

Query:   156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
             +   LW+SP G+ LAY +FND  V  + Y  Y +
Sbjct:   211 AYSALWWSPKGTFLAYAQFNDTEVPLIEYSFYSD 244

GO:0016020 "membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

UNIPROTKB|Q9N2I7 DPP4 "Dipeptidyl peptidase 4" [Felis catus (taxid:9685)]

 Score = 221 (82.9 bits), Expect = 3.9e-17, P = 3.9e-17
 Identities = 40/94 (42%), Positives = 59/94 (62%)

Query:    96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
             N  Q + WSP GH L +V  N++Y   +   S + +T  G +  ++NG+ADWVYEEE+FS
Sbjct:   149 NNTQWITWSPEGHKLAYVWKNDVYVKNEPNSSSHRITWTGEENAIYNGIADWVYEEEIFS 208

Query:   156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
             +   LW+SP G+ LAY +FND +V  + Y  Y +
Sbjct:   209 AYSALWWSPKGTFLAYAQFNDTQVPLIEYSFYSD 242

GO:0002020 "protease binding" evidence=ISS

GO:0005102 "receptor binding" evidence=ISS

GO:0008239 "dipeptidyl-peptidase activity" evidence=ISS

GO:0008284 "positive regulation of cell proliferation" evidence=ISS

GO:0009986 "cell surface" evidence=ISS

GO:0010716 "negative regulation of extracellular matrix disassembly" evidence=ISS

GO:0030027 "lamellipodium" evidence=ISS

GO:0030139 "endocytic vesicle" evidence=ISS

GO:0031295 "T cell costimulation" evidence=ISS

GO:0042803 "protein homodimerization activity" evidence=ISS

GO:0043542 "endothelial cell migration" evidence=ISS

GO:0071438 "invadopodium membrane" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	200
pfam00930	348	pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP I	4e-33

>gnl|CDD|216201 pfam00930, DPPIV_N, Dipeptidyl peptidase IV (DPP IV) N-terminal region

 Score =  120 bits (304), Expect = 4e-33
 Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 4/105 (3%)

Query: 97  FLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSS 156
            +Q  +WSP GH L +V+DNNLY           +T DG    +FNG+ADWVYEEEVF S
Sbjct: 44  KIQYAKWSPDGHKLAYVRDNNLYVRELATGKETQITSDG-SNGIFNGLADWVYEEEVFGS 102

Query: 157 TKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGS---KTYLYP 198
               W+SPDGS LA+++F+++ V  ++   Y + G    ++  YP
Sbjct: 103 NSAYWWSPDGSRLAFLRFDESEVPIITLPDYTDDGPAEVRSIKYP 147

This family is an alignment of the region to the N-terminal side of the active site. The Prosite motif does not correspond to this Pfam entry. Length = 348

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	200
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	99.92
KOG2100|consensus	755		99.5
PRK05137	435	tolB translocation protein TolB; Provisional	99.01
PRK03629	429	tolB translocation protein TolB; Provisional	98.95
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.94
PRK02889	427	tolB translocation protein TolB; Provisional	98.92
PRK01029	428	tolB translocation protein TolB; Provisional	98.92
PRK04043	419	tolB translocation protein TolB; Provisional	98.9
KOG2281|consensus	867		98.89
PRK05137	435	tolB translocation protein TolB; Provisional	98.87
PRK04043	419	tolB translocation protein TolB; Provisional	98.84
PRK04792	448	tolB translocation protein TolB; Provisional	98.83
PRK01742	429	tolB translocation protein TolB; Provisional	98.82
PRK00178	430	tolB translocation protein TolB; Provisional	98.81
PRK02889	427	tolB translocation protein TolB; Provisional	98.78
PRK03629	429	tolB translocation protein TolB; Provisional	98.78
PRK04792	448	tolB translocation protein TolB; Provisional	98.72
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.72
PRK01029	428	tolB translocation protein TolB; Provisional	98.71
PRK04922	433	tolB translocation protein TolB; Provisional	98.7
PRK04922	433	tolB translocation protein TolB; Provisional	98.69
PRK00178	430	tolB translocation protein TolB; Provisional	98.68
PRK01742	429	tolB translocation protein TolB; Provisional	98.57
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.48
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	98.35
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	98.07
PRK13616	591	lipoprotein LpqB; Provisional	98.01
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	97.9
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	97.57
COG4946	668	Uncharacterized protein related to the periplasmic	97.44
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	97.37
KOG2394|consensus	636		97.36
COG4946	668	Uncharacterized protein related to the periplasmic	97.35
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	97.24
PRK13616	591	lipoprotein LpqB; Provisional	97.15
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.06
KOG0318|consensus	603		96.88
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	96.78
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	96.67
PRK10115	686	protease 2; Provisional	96.35
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.25
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	96.02
KOG1539|consensus	910		96.02
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	96.0
KOG2139|consensus	445		95.5
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	95.4
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.23
TIGR02171	912	Fb_sc_TIGR02171 Fibrobacter succinogenes paralogou	95.19
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	95.16
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	94.8
KOG4497|consensus	447		94.79
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	94.77
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	94.69
KOG0318|consensus	603		94.68
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	94.57
KOG1446|consensus	311		94.41
KOG2139|consensus	445		94.41
KOG0973|consensus	942		94.38
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	94.34
PRK11028	330	6-phosphogluconolactonase; Provisional	93.89
KOG0271|consensus	480		93.6
KOG0271|consensus	480		93.37
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	93.29
KOG1524|consensus	737		93.26
KOG1274|consensus	933		92.85
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	92.57
PRK11028	330	6-phosphogluconolactonase; Provisional	92.55
KOG0293|consensus	519		92.39
KOG0266|consensus	456		91.92
KOG0291|consensus	893		91.82
COG1506	620	DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept	91.68
KOG1407|consensus	313		91.36
PTZ00420	568	coronin; Provisional	91.18
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	90.49
KOG0645|consensus	312		90.25
KOG4497|consensus	447		90.25
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	89.87
KOG0315|consensus	311		89.86
KOG0288|consensus	459		89.83
KOG0306|consensus	888		89.77
KOG2315|consensus	566		89.73
KOG0645|consensus	312		89.7
KOG0278|consensus	334		89.51
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	89.31
COG1770	682	PtrB Protease II [Amino acid transport and metabol	89.29
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	89.27
COG1506	620	DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-pept	89.14
PTZ00421	493	coronin; Provisional	89.13
KOG2110|consensus	391		89.11
KOG2096|consensus	420		88.41
KOG0305|consensus	484		88.34
KOG0273|consensus	524		88.25
KOG1445|consensus	1012		88.13
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	88.07
PF12566	122	DUF3748: Protein of unknown function (DUF3748); In	88.06
KOG0315|consensus	311		87.63
KOG2315|consensus	566		87.4
KOG0266|consensus	456		87.34
KOG0279|consensus	315		87.24
KOG2110|consensus	391		86.47
KOG0771|consensus	398		86.31
KOG1538|consensus	1081		86.29
KOG0273|consensus	524		86.28
KOG0305|consensus	484		86.21
KOG2314|consensus	698		86.2
KOG0263|consensus	707		86.09
KOG0973|consensus	942		85.83
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	85.47
KOG0279|consensus	315		85.4
KOG0293|consensus	519		85.27
PRK13613	599	lipoprotein LpqB; Provisional	84.97
KOG2394|consensus	636		84.7
PTZ00420	568	coronin; Provisional	84.47
PTZ00421	493	coronin; Provisional	84.23
KOG2055|consensus	514		83.78
KOG0291|consensus	893		83.74
KOG1273|consensus	405		83.37
KOG1007|consensus	370		83.35
KOG1274|consensus	933		83.26
KOG2106|consensus	626		83.15
KOG2055|consensus	514		83.01
KOG1445|consensus	1012		82.59
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	82.57
KOG0319|consensus	775		81.94
KOG1063|consensus	764		81.36
KOG2106|consensus	626		81.33
KOG0268|consensus	433		81.05
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	80.21

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=99.92  E-value=3e-25  Score=198.38  Aligned_cols=137  Identities=35%  Similarity=0.589  Sum_probs=108.7

Q ss_pred             ceeEEEEEeeeee-eeeeecCCCCc----cceeecCC-CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCC
Q psy7767          63 ALKLSIRCLTWKQ-SHSLSGRPDTL----TDVSDLDG-SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGI  136 (200)
Q Consensus        63 ~~kv~i~~n~~~~-R~s~~a~~~~~----~~v~~lt~-~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~  136 (200)
                      .+.|++..|..++ ||++.+.++..    ..++.++. ....+.+.|||||+.||||+++|||+.++.++...|||.+|.
T Consensus         4 ~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~~~nly~~~~~~~~~~~lT~dg~   83 (353)
T PF00930_consen    4 GKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVRDNNLYLRDLATGQETQLTTDGE   83 (353)
T ss_dssp             SSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEETTEEEEESSTTSEEEESES--T
T ss_pred             CCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEecCceEEEECCCCCeEEeccccc
Confidence            4678999999999 99999998621    23445554 367899999999999999999999999999999999999994


Q ss_pred             cceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeCCCCC-----CCCCCCCC
Q psy7767         137 KGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGS-----KTYLYPDV  200 (200)
Q Consensus       137 ~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~~~~-----~~~~YP~v  200 (200)
                       ..++||.|||+||||||++..++||||||++|||++.|++.|+.+.++.+..++.     ...+||++
T Consensus        84 -~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~  151 (353)
T PF00930_consen   84 -PGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKA  151 (353)
T ss_dssp             -TTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BT
T ss_pred             -eeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCC
Confidence             4579999999999999999999999999999999999999999999999988532     25677763

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG2100|consensus

Probab=99.50  E-value=4.9e-14  Score=138.76  Aligned_cols=128  Identities=34%  Similarity=0.598  Sum_probs=108.1

Q ss_pred             cceeEEEEEeeeee-eeeeecCCCCccceee----cC---CCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEee
Q psy7767          62 IALKLSIRCLTWKQ-SHSLSGRPDTLTDVSD----LD---GSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTR  133 (200)
Q Consensus        62 ~~~kv~i~~n~~~~-R~s~~a~~~~~~~v~~----lt---~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~  133 (200)
                      ....++...|..++ |||+.+.+. +.++..    ..   .+..++.+.|||.|+.++|+.++++|..........+++.
T Consensus       107 d~~~~~~~~~~~~~~rhs~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~wsp~~~~l~yv~~~niy~~~~~~~~~~~~~~  185 (755)
T KOG2100|consen  107 DRKYILLGRNYKKRFRHSYTAKYH-LYDLNTGEKLHPPEYEGSKIQYASWSPLGNDLAYVLHNNIYYQSSEEDEDVRIVS  185 (755)
T ss_pred             hhhhheeccCcccccceeeEEEEE-EEEcCCCCcccCcccCCCeeEEEEEcCCCCEEEEEEecccccccCcCCCceEEEe
Confidence            44566777777777 999999985 322211    11   1345689999999999999999999998877788888999


Q ss_pred             CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeCCC
Q psy7767         134 DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEP  190 (200)
Q Consensus       134 dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~~  190 (200)
                      ++..++++||.|||+||||+|....+.||||||.+|+|...+++.|+.+.++.+.+.
T Consensus       186 ~~~~~~i~ng~~Dw~yeeEv~~~~~a~wwsp~g~~la~~~~~dt~V~~~~~~~~~~~  242 (755)
T KOG2100|consen  186 NGGEDVIFNGKPDWIYEEEVLSSDSAIWWSPDGDRLAYASFNDTKVETINLPGYTDD  242 (755)
T ss_pred             cCCCceEEcCCCCceeehhhcccCccceeCCCCceeEEEEecccccceEEecccccc
Confidence            888888899999999999999999999999999999999999999999999999885

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.01  E-value=7.4e-09  Score=94.99  Aligned_cols=110  Identities=12%  Similarity=0.030  Sum_probs=80.7

Q ss_pred             ccCcceeEEEEEeeee----eeeeeecCCCCccceeecCC-CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeE
Q psy7767          59 STDIALKLSIRCLTWK----QSHSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSIN  129 (200)
Q Consensus        59 ~~~~~~kv~i~~n~~~----~R~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~  129 (200)
                      .|-+..++++..+..+    ....+..+.. ..+.+.++. ...+..|+|||||++|+|+..    .+||+.++++|+.+
T Consensus       161 ~g~f~~~iafv~~~~~~~~~~~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~  239 (435)
T PRK05137        161 KGYFDTRIVYVAESGPKNKRIKRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE  239 (435)
T ss_pred             CCcCCCeEEEEEeeCCCCCcceEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE
Confidence            4667778888877555    3456666653 445566665 456799999999999999973    47999999999888


Q ss_pred             EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeC
Q psy7767         130 ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYG  188 (200)
Q Consensus       130 rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~  188 (200)
                      +++....                   ...++.|||||++|+|....++...+|.+...+
T Consensus       240 ~l~~~~g-------------------~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~  279 (435)
T PRK05137        240 LVGNFPG-------------------MTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRS  279 (435)
T ss_pred             EeecCCC-------------------cccCcEECCCCCEEEEEEecCCCceEEEEECCC
Confidence            8885332                   234689999999999987766666666665443

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.95  E-value=9.2e-09  Score=94.76  Aligned_cols=112  Identities=17%  Similarity=0.062  Sum_probs=77.8

Q ss_pred             EEeccCcceeEEEEEeeee---eeeeeecCCCCccceeecCCC-CCceeeEECcCCCEEEEEEc----CcEEEEECCCCC
Q psy7767          56 LQRSTDIALKLSIRCLTWK---QSHSLSGRPDTLTDVSDLDGS-NFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRS  127 (200)
Q Consensus        56 ~~~~~~~~~kv~i~~n~~~---~R~s~~a~~~~~~~v~~lt~~-~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~  127 (200)
                      |-..|.+..+++++.....   ....+.++.. ....+.++.+ ..+..|+|||||++|||+..    .+||+.++++|+
T Consensus       156 tg~~g~f~~riayv~~~~~~~~~~~l~~~d~d-g~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~  234 (429)
T PRK03629        156 TGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA  234 (429)
T ss_pred             cCCCCccCCeEEEEEeeCCCCcceeEEEEcCC-CCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC
Confidence            4445678888888876432   1456666653 3344555543 46799999999999999962    379999999998


Q ss_pred             eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEee
Q psy7767         128 INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHY  187 (200)
Q Consensus       128 ~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~  187 (200)
                      .++|+....                   ...++.|||||++|+|+....+...++.+...
T Consensus       235 ~~~l~~~~~-------------------~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~  275 (429)
T PRK03629        235 VRQVASFPR-------------------HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA  275 (429)
T ss_pred             eEEccCCCC-------------------CcCCeEECCCCCEEEEEEcCCCCcEEEEEECC
Confidence            888885322                   23468999999999998655444455554443

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.94  E-value=5e-09  Score=97.53  Aligned_cols=92  Identities=20%  Similarity=0.243  Sum_probs=74.9

Q ss_pred             eeEEEEEeeeeeeeeeecCCCCccceeecCCCCCc-eeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcc
Q psy7767          64 LKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGSNFL-QLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKG  138 (200)
Q Consensus        64 ~kv~i~~n~~~~R~s~~a~~~~~~~v~~lt~~~~i-s~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~  138 (200)
                      ++|++..+.+++.+.|..+-. ..++.+++.+.++ ..|.|||||++|+|+.+.    +||+++.+++...|+|..+.  
T Consensus       250 ~~l~f~~~rdg~~~iy~~dl~-~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~--  326 (425)
T COG0823         250 SKLAFSSSRDGSPDIYLMDLD-GKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGG--  326 (425)
T ss_pred             CEEEEEECCCCCccEEEEcCC-CCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCC--
Confidence            788888888888777777775 4456777764443 699999999999999864    89999999999999998764  


Q ss_pred             eEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767         139 VLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus       139 ~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                                       ....+.|||||++|+|....
T Consensus       327 -----------------~~~~p~~SpdG~~i~~~~~~  346 (425)
T COG0823         327 -----------------GNSNPVWSPDGDKIVFESSS  346 (425)
T ss_pred             -----------------CCcCccCCCCCCEEEEEecc
Confidence                             34478999999999999744

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.92  E-value=1.8e-08  Score=92.50  Aligned_cols=111  Identities=16%  Similarity=0.091  Sum_probs=78.6

Q ss_pred             eccCcceeEEEEEeeeeeeeeeecCCCCccceeecCC-CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEe
Q psy7767          58 RSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALT  132 (200)
Q Consensus        58 ~~~~~~~kv~i~~n~~~~R~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT  132 (200)
                      ..|.+..+++......+....+.++.. ....+.++. ...+..|+|||||++|||+..    .+||+.++.+|+..+++
T Consensus       158 ~~g~f~~~iayv~~~~~~~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~  236 (427)
T PRK02889        158 ERGVFSTRIAYVIKTGNRYQLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVA  236 (427)
T ss_pred             CCcccccEEEEEEccCCccEEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEee
Confidence            355667777777654444456666553 334444443 456789999999999999973    36999999999888887


Q ss_pred             eCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeC
Q psy7767         133 RDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYG  188 (200)
Q Consensus       133 ~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~  188 (200)
                      ....                   ....+.|||||++|+|....++...+|.+...+
T Consensus       237 ~~~g-------------------~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~  273 (427)
T PRK02889        237 NFKG-------------------SNSAPAWSPDGRTLAVALSRDGNSQIYTVNADG  273 (427)
T ss_pred             cCCC-------------------CccceEECCCCCEEEEEEccCCCceEEEEECCC
Confidence            5321                   234689999999999987766666777765543

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.92  E-value=1.3e-08  Score=94.12  Aligned_cols=87  Identities=13%  Similarity=0.105  Sum_probs=60.9

Q ss_pred             eeeecCCCCccceeecCC-CCCceeeEECcCCCE--EEEEEc----CcEEEEECCCCCeEEEeeCCCcceEeccccccee
Q psy7767          77 HSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHD--LIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVY  149 (200)
Q Consensus        77 ~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~--IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~  149 (200)
                      ..|..+.. ..+.+++|. +.....|+|||||+.  ++|++.    .+||+.++++|+.++|+....             
T Consensus       166 ~l~~~d~d-G~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g-------------  231 (428)
T PRK01029        166 ELWSVDYD-GQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQG-------------  231 (428)
T ss_pred             eEEEEcCC-CCCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCC-------------
Confidence            44444443 335566665 345689999999998  555753    379999999999999997432             


Q ss_pred             eeeeeCCCcceEEccCCCEEEEEEEcCCcceEEE
Q psy7767         150 EEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMS  183 (200)
Q Consensus       150 eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~  183 (200)
                            ....+.|||||++|||+....+....+.
T Consensus       232 ------~~~~p~wSPDG~~Laf~s~~~g~~di~~  259 (428)
T PRK01029        232 ------NQLMPTFSPRKKLLAFISDRYGNPDLFI  259 (428)
T ss_pred             ------CccceEECCCCCEEEEEECCCCCcceeE
Confidence                  2346899999999999975444333433

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.90  E-value=2.5e-08  Score=92.35  Aligned_cols=112  Identities=13%  Similarity=0.011  Sum_probs=79.3

Q ss_pred             eccCcceeEEEEEeeee--eeeeeecCCCCccceeecCCCCCceeeEECcCCCE-EEEEE----cCcEEEEECCCCCeEE
Q psy7767          58 RSTDIALKLSIRCLTWK--QSHSLSGRPDTLTDVSDLDGSNFLQLVQWSPVGHD-LIFVK----DNNLYQAYDDFRSINA  130 (200)
Q Consensus        58 ~~~~~~~kv~i~~n~~~--~R~s~~a~~~~~~~v~~lt~~~~is~~~wSPDGk~-IAFV~----~gdLyv~~~~~g~~~r  130 (200)
                      +.+.+..+++.+....+  ....+.+++. ..+.+.++.+.....|+|||||++ ++|+.    +.+||+.++.+|+.++
T Consensus       149 ~~~~f~~r~~~v~~~~~~~~~~l~~~d~d-g~~~~~~~~~~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~  227 (419)
T PRK04043        149 PSIDWMKRKVVFSKYTGPKKSNIVLADYT-LTYQKVIVKGGLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEK  227 (419)
T ss_pred             CCcCceeeEEEEEEccCCCcceEEEECCC-CCceeEEccCCCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEE
Confidence            34467778887776444  3567777774 445555655556789999999997 66664    2479999999999999


Q ss_pred             EeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeCC
Q psy7767         131 LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       131 LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~  189 (200)
                      |+..+.                   ....+.|||||++|+|.........++.+...++
T Consensus       228 lt~~~g-------------------~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g  267 (419)
T PRK04043        228 IASSQG-------------------MLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTK  267 (419)
T ss_pred             EecCCC-------------------cEEeeEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence            996332                   2335789999999999976655556666654443

>KOG2281|consensus

Probab=98.89  E-value=9.7e-10  Score=106.22  Aligned_cols=105  Identities=20%  Similarity=0.267  Sum_probs=88.5

Q ss_pred             CCCceeeEECcC-CCEEEEEEcCcEEEEECCCCCeEEEeeC--CC----cceEecccccceeeeeeeCCCcceEEccCC-
Q psy7767          95 SNFLQLVQWSPV-GHDLIFVKDNNLYQAYDDFRSINALTRD--GI----KGVLFNGVADWVYEEEVFSSTKTLWFSPDG-  166 (200)
Q Consensus        95 ~~~is~~~wSPD-Gk~IAFV~~gdLyv~~~~~g~~~rLT~d--g~----~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG-  166 (200)
                      .....+|+.||. +..|||++..++||.++..+.++|+|..  |.    .+.+.+|+|.++.+|| |.+..++||||-+ 
T Consensus       199 t~~~~dP~lcP~~~~fia~i~~~dl~V~n~~~~~ekrlt~~h~g~sn~~dd~~saGVasyv~QEE-fdR~~GyWW~p~s~  277 (867)
T KOG2281|consen  199 TSTRMDPKLCPADPDFIAYIKVCDLWVLNILTGEEKRLTYIHNGSSNSKDDAISAGVASYVVQEE-FDRFEGYWWSPPSG  277 (867)
T ss_pred             CCCccCcccCCCCccceeeeehhhhhhhhhhhchhhceeeeeccccccccchhhcCcchHHHHHH-HHhhcceeecCCCC
Confidence            455689999995 9999999999999999999999999852  21    2346899999999999 7899999999844 


Q ss_pred             ---CEEEEEEEcCCcceEEEEEeeCC--CCCCCCCCCCC
Q psy7767         167 ---SILAYMKFNDARVHNMSYIHYGE--PGSKTYLYPDV  200 (200)
Q Consensus       167 ---k~Laf~r~D~s~v~~~~i~~~~~--~~~~~~~YP~v  200 (200)
                         .+|+|...|++.|.+++++..+.  ++.++++||++
T Consensus       278 ~~~~rIlYeeVdesev~V~h~~s~~~~~~~~d~~rYPrt  316 (867)
T KOG2281|consen  278 LKILRILYEEVDESEVEVIHVPSPVLGDRRVDSYRYPRT  316 (867)
T ss_pred             CceEEEEeeecChhheEEEeccCcccCCCccccccCCcC
Confidence               47999999999999998887754  55678999985

>PRK05137 tolB translocation protein TolB; Provisional

Probab=98.87  E-value=3.5e-08  Score=90.54  Aligned_cols=79  Identities=22%  Similarity=0.277  Sum_probs=58.6

Q ss_pred             ceeecCCCC-CceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767          88 DVSDLDGSN-FLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF  162 (200)
Q Consensus        88 ~v~~lt~~~-~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W  162 (200)
                      .+++++... ....+.|||||++|+|+.+.    +||+++++++..++||..+.                   ....+.|
T Consensus       281 ~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~-------------------~~~~~~~  341 (435)
T PRK05137        281 TTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGG-------------------RYSTPVW  341 (435)
T ss_pred             ceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCC-------------------cccCeEE
Confidence            456666543 34789999999999999853    79999999999999987432                   2345789


Q ss_pred             ccCCCEEEEEEEcCCcceEEEEE
Q psy7767         163 SPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       163 SPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      ||||++|+|++.+.+...++.+.
T Consensus       342 SpdG~~ia~~~~~~~~~~i~~~d  364 (435)
T PRK05137        342 SPRGDLIAFTKQGGGQFSIGVMK  364 (435)
T ss_pred             CCCCCEEEEEEcCCCceEEEEEE
Confidence            99999999997655433444333

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.84  E-value=4.5e-08  Score=90.60  Aligned_cols=82  Identities=10%  Similarity=0.058  Sum_probs=62.5

Q ss_pred             eeecCC-CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          89 VSDLDG-SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        89 v~~lt~-~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      .+.++. .+....+.|||||++|+|+..    .+||+.+++++..++||....                   ....+.||
T Consensus       225 ~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~-------------------~d~~p~~S  285 (419)
T PRK04043        225 KEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPG-------------------IDVNGNFV  285 (419)
T ss_pred             EEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEEcccCCC-------------------ccCccEEC
Confidence            344443 333567999999999999974    489999999999999997542                   23457899


Q ss_pred             cCCCEEEEEEEcCCcceEEEEEeeCC
Q psy7767         164 PDGSILAYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       164 PDGk~Laf~r~D~s~v~~~~i~~~~~  189 (200)
                      |||++|+|+....+...+|.++..++
T Consensus       286 PDG~~I~F~Sdr~g~~~Iy~~dl~~g  311 (419)
T PRK04043        286 EDDKRIVFVSDRLGYPNIFMKKLNSG  311 (419)
T ss_pred             CCCCEEEEEECCCCCceEEEEECCCC
Confidence            99999999987666667777776554

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.83  E-value=4.2e-08  Score=91.06  Aligned_cols=113  Identities=17%  Similarity=0.077  Sum_probs=77.7

Q ss_pred             EEeccCcceeEEEEEeeeee---eeeeecCCCCccceeecCC-CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCC
Q psy7767          56 LQRSTDIALKLSIRCLTWKQ---SHSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRS  127 (200)
Q Consensus        56 ~~~~~~~~~kv~i~~n~~~~---R~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~  127 (200)
                      |=..|-+..+++......+.   ...+.++.. ..+.+.++. ...+..|+|||||++|+|+..    .+||+.++++++
T Consensus       175 tG~~g~f~~riayv~~~~~~~~~~~l~i~d~d-G~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~  253 (448)
T PRK04792        175 TGERGAFLTRIAYVVVNDKDKYPYQLMIADYD-GYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQV  253 (448)
T ss_pred             cCCCccccCEEEEEEeeCCCCCceEEEEEeCC-CCCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCC
Confidence            33456778888887765443   233334432 223445554 456789999999999999963    269999999998


Q ss_pred             eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeC
Q psy7767         128 INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYG  188 (200)
Q Consensus       128 ~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~  188 (200)
                      .++++....                   ....+.|||||++|+|....++...++.+...+
T Consensus       254 ~~~lt~~~g-------------------~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~t  295 (448)
T PRK04792        254 REKVTSFPG-------------------INGAPRFSPDGKKLALVLSKDGQPEIYVVDIAT  295 (448)
T ss_pred             eEEecCCCC-------------------CcCCeeECCCCCEEEEEEeCCCCeEEEEEECCC
Confidence            888886321                   234689999999999987666655666665443

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.82  E-value=8.5e-08  Score=88.08  Aligned_cols=109  Identities=17%  Similarity=0.073  Sum_probs=73.4

Q ss_pred             ccCcceeEEEEEeeeee---eeeeecCCCCccceeecCC-CCCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEE
Q psy7767          59 STDIALKLSIRCLTWKQ---SHSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINA  130 (200)
Q Consensus        59 ~~~~~~kv~i~~n~~~~---R~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~r  130 (200)
                      +|.+-.+++++....+.   ...+..+.. ......++. ...+..|+|||||++|||+..+    +||+.++.+++.++
T Consensus       164 ~g~f~~ria~v~~~~~~~~~~~i~i~d~d-g~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~  242 (429)
T PRK01742        164 RGAFRTRIAYVVQKNGGSQPYEVRVADYD-GFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV  242 (429)
T ss_pred             CCccCCEEEEEEEEcCCCceEEEEEECCC-CCCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE
Confidence            45566777776654321   334444442 223445554 3457999999999999999742    69999999888777


Q ss_pred             EeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEee
Q psy7767         131 LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHY  187 (200)
Q Consensus       131 LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~  187 (200)
                      ++....                   ....+.|||||++|+|....++...+|.+...
T Consensus       243 l~~~~g-------------------~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~  280 (429)
T PRK01742        243 VASFRG-------------------HNGAPAFSPDGSRLAFASSKDGVLNIYVMGAN  280 (429)
T ss_pred             EecCCC-------------------ccCceeECCCCCEEEEEEecCCcEEEEEEECC
Confidence            775321                   23468999999999998765665666655543

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.81  E-value=1e-07  Score=86.78  Aligned_cols=112  Identities=15%  Similarity=0.076  Sum_probs=74.0

Q ss_pred             EeccCcceeEEEEEeeee----eeeeeecCCCCccceeecCC-CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCC
Q psy7767          57 QRSTDIALKLSIRCLTWK----QSHSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRS  127 (200)
Q Consensus        57 ~~~~~~~~kv~i~~n~~~----~R~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~  127 (200)
                      -.+|.+-.+++.+.....    ....+..+.. ..+.+.++. +..+..|+|||||++|||+..    .+||+.++++|+
T Consensus       156 g~~g~f~~~ia~v~~~~~~~~~~~~l~~~d~~-g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~  234 (430)
T PRK00178        156 GIKGAFSTRILYVTAERFSVNTRYTLQRSDYD-GARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR  234 (430)
T ss_pred             CCCccceeeEEEEEeeCCCCCcceEEEEECCC-CCCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC
Confidence            335566667776654321    1123333432 234445543 456799999999999999973    379999999999


Q ss_pred             eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeC
Q psy7767         128 INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYG  188 (200)
Q Consensus       128 ~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~  188 (200)
                      .++++....                   ....+.|||||++|+|....++...++.+...+
T Consensus       235 ~~~l~~~~g-------------------~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~  276 (430)
T PRK00178        235 REQITNFEG-------------------LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLAS  276 (430)
T ss_pred             EEEccCCCC-------------------CcCCeEECCCCCEEEEEEccCCCceEEEEECCC
Confidence            888885332                   234689999999999987655555555554443

>PRK02889 tolB translocation protein TolB; Provisional

Probab=98.78  E-value=9.8e-08  Score=87.72  Aligned_cols=79  Identities=22%  Similarity=0.266  Sum_probs=57.2

Q ss_pred             ceeecCCCC-CceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767          88 DVSDLDGSN-FLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF  162 (200)
Q Consensus        88 ~v~~lt~~~-~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W  162 (200)
                      .+++++... ....+.|||||++|+|+.+.    +||..+++++..++++..+.                   ....+.|
T Consensus       275 ~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~-------------------~~~~~~~  335 (427)
T PRK02889        275 GLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGS-------------------YNTSPRI  335 (427)
T ss_pred             CcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCC-------------------CcCceEE
Confidence            455666433 34789999999999999753    79999998888888886542                   2235789


Q ss_pred             ccCCCEEEEEEEcCCcceEEEEE
Q psy7767         163 SPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       163 SPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      ||||++|+|...+.+...++.+.
T Consensus       336 SpDG~~Ia~~s~~~g~~~I~v~d  358 (427)
T PRK02889        336 SPDGKLLAYISRVGGAFKLYVQD  358 (427)
T ss_pred             CCCCCEEEEEEccCCcEEEEEEE
Confidence            99999999987654433344433

>PRK03629 tolB translocation protein TolB; Provisional

Probab=98.78  E-value=1.1e-07  Score=87.73  Aligned_cols=79  Identities=15%  Similarity=0.244  Sum_probs=59.5

Q ss_pred             ceeecCCC-CCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767          88 DVSDLDGS-NFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF  162 (200)
Q Consensus        88 ~v~~lt~~-~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W  162 (200)
                      .+++++.+ .....+.|||||++|+|+.+.    +||+.+++++..++++..+.                   ....++|
T Consensus       278 ~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~-------------------~~~~~~~  338 (429)
T PRK03629        278 QIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGS-------------------QNQDADV  338 (429)
T ss_pred             CEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCC-------------------CccCEEE
Confidence            45566643 356899999999999999853    79999999998889986542                   2346899


Q ss_pred             ccCCCEEEEEEEcCCcceEEEEE
Q psy7767         163 SPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       163 SPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      ||||++|+|+..+.+...++.+.
T Consensus       339 SpDG~~Ia~~~~~~g~~~I~~~d  361 (429)
T PRK03629        339 SSDGKFMVMVSSNGGQQHIAKQD  361 (429)
T ss_pred             CCCCCEEEEEEccCCCceEEEEE
Confidence            99999999987665444444444

>PRK04792 tolB translocation protein TolB; Provisional

Probab=98.72  E-value=2.5e-07  Score=85.96  Aligned_cols=81  Identities=16%  Similarity=0.255  Sum_probs=59.8

Q ss_pred             ceeecCCC-CCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767          88 DVSDLDGS-NFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF  162 (200)
Q Consensus        88 ~v~~lt~~-~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W  162 (200)
                      ++++++.. .....++|||||++|+|+.+.    +||+.++++++.++||.++.                   ...++.|
T Consensus       297 ~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~-------------------~~~~~~~  357 (448)
T PRK04792        297 ALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGE-------------------QNLGGSI  357 (448)
T ss_pred             CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCC-------------------CCcCeeE
Confidence            45556543 345789999999999999753    79999999999999986543                   2235789


Q ss_pred             ccCCCEEEEEEEcCCcceEEEEEee
Q psy7767         163 SPDGSILAYMKFNDARVHNMSYIHY  187 (200)
Q Consensus       163 SPDGk~Laf~r~D~s~v~~~~i~~~  187 (200)
                      ||||++|+|...+.....++.+...
T Consensus       358 SpDG~~l~~~~~~~g~~~I~~~dl~  382 (448)
T PRK04792        358 TPDGRSMIMVNRTNGKFNIARQDLE  382 (448)
T ss_pred             CCCCCEEEEEEecCCceEEEEEECC
Confidence            9999999998766554555555433

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.72  E-value=6.6e-08  Score=90.07  Aligned_cols=76  Identities=22%  Similarity=0.253  Sum_probs=60.3

Q ss_pred             CCCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      .+....|+|||||++|||+..+    +||++++.++..++||+..                   +....+.|||||++|+
T Consensus       237 ~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~-------------------gi~~~Ps~spdG~~iv  297 (425)
T COG0823         237 NGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPRLTNGF-------------------GINTSPSWSPDGSKIV  297 (425)
T ss_pred             CCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcceecccCC-------------------ccccCccCCCCCCEEE
Confidence            4455789999999999999754    7999999999988888743                   3455889999999999


Q ss_pred             EEEEcCCcceEEEEEeeCC
Q psy7767         171 YMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       171 f~r~D~s~v~~~~i~~~~~  189 (200)
                      |+....+..++|.+...++
T Consensus       298 f~Sdr~G~p~I~~~~~~g~  316 (425)
T COG0823         298 FTSDRGGRPQIYLYDLEGS  316 (425)
T ss_pred             EEeCCCCCcceEEECCCCC
Confidence            9977666666665555443

>PRK01029 tolB translocation protein TolB; Provisional

Probab=98.71  E-value=1.8e-07  Score=86.52  Aligned_cols=82  Identities=15%  Similarity=0.033  Sum_probs=61.0

Q ss_pred             eeecCC-CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          89 VSDLDG-SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        89 v~~lt~-~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      .++++. ......|.|||||++|+|+..    .+||+.++++++.++||....                   ....+.||
T Consensus       319 ~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~-------------------~~~~p~wS  379 (428)
T PRK01029        319 PRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPE-------------------NKESPSWA  379 (428)
T ss_pred             eEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCC-------------------CccceEEC
Confidence            444554 245678999999999999974    379999999999999986431                   23468999


Q ss_pred             cCCCEEEEEEEcCCcceEEEEEeeCC
Q psy7767         164 PDGSILAYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       164 PDGk~Laf~r~D~s~v~~~~i~~~~~  189 (200)
                      |||+.|+|...+.+...++.+...++
T Consensus       380 pDG~~L~f~~~~~g~~~L~~vdl~~g  405 (428)
T PRK01029        380 IDSLHLVYSAGNSNESELYLISLITK  405 (428)
T ss_pred             CCCCEEEEEECCCCCceEEEEECCCC
Confidence            99999999877655555555554443

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.70  E-value=2.7e-07  Score=84.76  Aligned_cols=108  Identities=15%  Similarity=0.063  Sum_probs=71.3

Q ss_pred             CcceeEEEEEeeee----eeeeeecCCCCccceeecCC-CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEE
Q psy7767          61 DIALKLSIRCLTWK----QSHSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINAL  131 (200)
Q Consensus        61 ~~~~kv~i~~n~~~----~R~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rL  131 (200)
                      .+..+++.+....+    ....+..+.. ......++. +..+..|+|||||+.|+|+..    .+||+.++++++.+++
T Consensus       165 ~f~~~ia~v~~~~~~~~~~~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l  243 (433)
T PRK04922        165 AFWTRIAYVTVSGAGGAMRYALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELV  243 (433)
T ss_pred             cccceEEEEEEeCCCCCceEEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEe
Confidence            44555555544221    1234444442 334555554 345789999999999999973    3699999998888888


Q ss_pred             eeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeC
Q psy7767         132 TRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYG  188 (200)
Q Consensus       132 T~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~  188 (200)
                      +....                   ....+.|||||++|+|....++...++.+...+
T Consensus       244 ~~~~g-------------------~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~  281 (433)
T PRK04922        244 ASFRG-------------------INGAPSFSPDGRRLALTLSRDGNPEIYVMDLGS  281 (433)
T ss_pred             ccCCC-------------------CccCceECCCCCEEEEEEeCCCCceEEEEECCC
Confidence            75321                   234689999999999987665555555554443

>PRK04922 tolB translocation protein TolB; Provisional

Probab=98.69  E-value=3.1e-07  Score=84.38  Aligned_cols=79  Identities=20%  Similarity=0.265  Sum_probs=57.0

Q ss_pred             ceeecCCCC-CceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767          88 DVSDLDGSN-FLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF  162 (200)
Q Consensus        88 ~v~~lt~~~-~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W  162 (200)
                      .+++++... ....++|||||++|+|+.+.    +||+.+++++..+++|..+.                   ....+.|
T Consensus       283 ~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~-------------------~~~~~~~  343 (433)
T PRK04922        283 QLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGN-------------------YNARASV  343 (433)
T ss_pred             CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCC-------------------CccCEEE
Confidence            445555432 34689999999999999753    69999999899999986543                   2335899


Q ss_pred             ccCCCEEEEEEEcCCcceEEEEE
Q psy7767         163 SPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       163 SPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      ||||++|+|...+.+...++.+.
T Consensus       344 SpDG~~Ia~~~~~~~~~~I~v~d  366 (433)
T PRK04922        344 SPDGKKIAMVHGSGGQYRIAVMD  366 (433)
T ss_pred             CCCCCEEEEEECCCCceeEEEEE
Confidence            99999999986554333333333

>PRK00178 tolB translocation protein TolB; Provisional

Probab=98.68  E-value=3.5e-07  Score=83.28  Aligned_cols=80  Identities=19%  Similarity=0.215  Sum_probs=58.0

Q ss_pred             ceeecCCC-CCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767          88 DVSDLDGS-NFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF  162 (200)
Q Consensus        88 ~v~~lt~~-~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W  162 (200)
                      .+++++.. .....+.|||||++|+|+.+.    +||+.++++++.++++..+.                   ....+.|
T Consensus       278 ~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~-------------------~~~~~~~  338 (430)
T PRK00178        278 QLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGN-------------------YNARPRL  338 (430)
T ss_pred             CeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCC-------------------CccceEE
Confidence            44556543 335789999999999999753    79999999999999986442                   2335789


Q ss_pred             ccCCCEEEEEEEcCCcceEEEEEe
Q psy7767         163 SPDGSILAYMKFNDARVHNMSYIH  186 (200)
Q Consensus       163 SPDGk~Laf~r~D~s~v~~~~i~~  186 (200)
                      ||||++|+|...+.+...++.+..
T Consensus       339 Spdg~~i~~~~~~~~~~~l~~~dl  362 (430)
T PRK00178        339 SADGKTLVMVHRQDGNFHVAAQDL  362 (430)
T ss_pred             CCCCCEEEEEEccCCceEEEEEEC
Confidence            999999999876554334444443

>PRK01742 tolB translocation protein TolB; Provisional

Probab=98.57  E-value=9.5e-07  Score=81.19  Aligned_cols=72  Identities=19%  Similarity=0.208  Sum_probs=56.1

Q ss_pred             CceeeEECcCCCEEEEEE--cC--cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVK--DN--NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~--~g--dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....++|||||++|+|+.  ++  +||+.+++++..+++|....                   ...++.|||||++|+|.
T Consensus       249 ~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~-------------------~~~~~~wSpDG~~i~f~  309 (429)
T PRK01742        249 HNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAG-------------------NNTEPSWSPDGQSILFT  309 (429)
T ss_pred             ccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeeccCCC-------------------CcCCEEECCCCCEEEEE
Confidence            346799999999999986  33  69999999888888886332                   34578999999999998


Q ss_pred             EEcCCcceEEEEEee
Q psy7767         173 KFNDARVHNMSYIHY  187 (200)
Q Consensus       173 r~D~s~v~~~~i~~~  187 (200)
                      ....+...++.+...
T Consensus       310 s~~~g~~~I~~~~~~  324 (429)
T PRK01742        310 SDRSGSPQVYRMSAS  324 (429)
T ss_pred             ECCCCCceEEEEECC
Confidence            766666677766543

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.48  E-value=2.8e-06  Score=76.13  Aligned_cols=92  Identities=18%  Similarity=0.095  Sum_probs=62.3

Q ss_pred             eeeeecCCCCccceeecCC-CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceee
Q psy7767          76 SHSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYE  150 (200)
Q Consensus        76 R~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~e  150 (200)
                      ...+..+.- ..+.+.++. +..+..|+|||||++|||+..    .+||+.+++++...+++....              
T Consensus       170 ~~l~~~d~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~--------------  234 (417)
T TIGR02800       170 YELQVADYD-GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPG--------------  234 (417)
T ss_pred             ceEEEEcCC-CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCC--------------
Confidence            334444442 334555554 345789999999999999963    379999999887777765321              


Q ss_pred             eeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEee
Q psy7767         151 EEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHY  187 (200)
Q Consensus       151 EEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~  187 (200)
                           ...++.|||||+.|+|.....+...++.+...
T Consensus       235 -----~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~  266 (417)
T TIGR02800       235 -----MNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLD  266 (417)
T ss_pred             -----CccceEECCCCCEEEEEECCCCCccEEEEECC
Confidence                 23457899999999998655544455554433

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=98.35  E-value=9.6e-06  Score=72.70  Aligned_cols=79  Identities=22%  Similarity=0.337  Sum_probs=57.0

Q ss_pred             eeecCCC-CCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          89 VSDLDGS-NFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        89 v~~lt~~-~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      .++++.. .....+.|+|||++|+|+.+.    +||+.++++++.++++..+.                   ....+.||
T Consensus       270 ~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~-------------------~~~~~~~s  330 (417)
T TIGR02800       270 LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGG-------------------YNASPSWS  330 (417)
T ss_pred             EEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCC-------------------CccCeEEC
Confidence            4444433 234688999999999999743    79999999888888886543                   23467899


Q ss_pred             cCCCEEEEEEEcCCcceEEEEEe
Q psy7767         164 PDGSILAYMKFNDARVHNMSYIH  186 (200)
Q Consensus       164 PDGk~Laf~r~D~s~v~~~~i~~  186 (200)
                      |||+.|+|...+.....++.+..
T Consensus       331 pdg~~i~~~~~~~~~~~i~~~d~  353 (417)
T TIGR02800       331 PDGDLIAFVHREGGGFNIAVMDL  353 (417)
T ss_pred             CCCCEEEEEEccCCceEEEEEeC
Confidence            99999999876654444444443

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=98.07  E-value=0.00016  Score=60.22  Aligned_cols=60  Identities=22%  Similarity=0.262  Sum_probs=41.4

Q ss_pred             CCCceeeEECcCCCEEEEEE----cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK----DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~----~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ......+.|||+|+.|+...    .|+|.+.+++..+  .|.....                  .....+.|||||++|+
T Consensus       100 ~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~--~i~~~~~------------------~~~t~~~WsPdGr~~~  159 (194)
T PF08662_consen  100 TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK--KISTFEH------------------SDATDVEWSPDGRYLA  159 (194)
T ss_pred             CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE--Eeecccc------------------CcEEEEEEcCCCCEEE
Confidence            34556789999999999984    3578888887333  3332211                  1234678999999998


Q ss_pred             EEEE
Q psy7767         171 YMKF  174 (200)
Q Consensus       171 f~r~  174 (200)
                      ....
T Consensus       160 ta~t  163 (194)
T PF08662_consen  160 TATT  163 (194)
T ss_pred             EEEe
Confidence            7744

>PRK13616 lipoprotein LpqB; Provisional

Probab=98.01  E-value=2.6e-05  Score=75.66  Aligned_cols=85  Identities=19%  Similarity=0.108  Sum_probs=47.2

Q ss_pred             eeeeecCCCCccceeecCCCCCceeeEECcCCCEEEEEEcC-c-EEEEECCC-CCeEEEeeCCCcceEecccccceeeee
Q psy7767          76 SHSLSGRPDTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDN-N-LYQAYDDF-RSINALTRDGIKGVLFNGVADWVYEEE  152 (200)
Q Consensus        76 R~s~~a~~~~~~~v~~lt~~~~is~~~wSPDGk~IAFV~~g-d-Lyv~~~~~-g~~~rLT~dg~~~~~~nG~pdwv~eEE  152 (200)
                      ++.|.+...  ...+.++.+.....|+|||||++|+|+.++ . +++....+ ++...+.-++.+          ... +
T Consensus       379 s~Lwv~~~g--g~~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge----------~~~-~  445 (591)
T PRK13616        379 SSLWVGPLG--GVAVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASA----------VAS-R  445 (591)
T ss_pred             eEEEEEeCC--CcceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCch----------hhh-c
Confidence            344554431  123455555568999999999999999754 2 22222111 111111111110          000 0


Q ss_pred             eeCCCcceEEccCCCEEEEEE
Q psy7767         153 VFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus       153 i~~~~~~~~WSPDGk~Laf~r  173 (200)
                      +-+...++.|||||++|||+.
T Consensus       446 ~~g~Issl~wSpDG~RiA~i~  466 (591)
T PRK13616        446 VPGPISELQLSRDGVRAAMII  466 (591)
T ss_pred             cCCCcCeEEECCCCCEEEEEE
Confidence            012467899999999999986

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=97.90  E-value=0.00046  Score=57.46  Aligned_cols=60  Identities=23%  Similarity=0.402  Sum_probs=39.9

Q ss_pred             CCCceeeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      .+.+.+++|||+|+++|.+.+   ..+-+.++.......+   +.                  .....+.|||+|++|+.
T Consensus        59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~~~i~~~---~~------------------~~~n~i~wsP~G~~l~~  117 (194)
T PF08662_consen   59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKGKKIFSF---GT------------------QPRNTISWSPDGRFLVL  117 (194)
T ss_pred             CCceEEEEECcCCCEEEEEEccCCcccEEEcCcccEeEee---cC------------------CCceEEEECCCCCEEEE
Confidence            345899999999999998864   2566666642111111   11                  12346899999999998


Q ss_pred             EEEc
Q psy7767         172 MKFN  175 (200)
Q Consensus       172 ~r~D  175 (200)
                      .-.+
T Consensus       118 ~g~~  121 (194)
T PF08662_consen  118 AGFG  121 (194)
T ss_pred             EEcc
Confidence            7544

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=97.57  E-value=0.00017  Score=44.74  Aligned_cols=21  Identities=19%  Similarity=0.377  Sum_probs=16.8

Q ss_pred             CCcceEEccCCCEEEEEEEcC
Q psy7767         156 STKTLWFSPDGSILAYMKFND  176 (200)
Q Consensus       156 ~~~~~~WSPDGk~Laf~r~D~  176 (200)
                      .+..+.|||||++|+|++..+
T Consensus        10 ~~~~p~~SpDGk~i~f~s~~~   30 (39)
T PF07676_consen   10 DDGSPAWSPDGKYIYFTSNRN   30 (39)
T ss_dssp             SEEEEEE-TTSSEEEEEEECT
T ss_pred             cccCEEEecCCCEEEEEecCC
Confidence            345789999999999998776

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=97.44  E-value=0.00041  Score=66.00  Aligned_cols=67  Identities=21%  Similarity=0.360  Sum_probs=50.4

Q ss_pred             ceeecCCC-CCceeeEECcCCCEEEEEE--------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767          88 DVSDLDGS-NFLQLVQWSPVGHDLIFVK--------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTK  158 (200)
Q Consensus        88 ~v~~lt~~-~~is~~~wSPDGk~IAFV~--------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~  158 (200)
                      ...+++.+ +-+..|++||||++|||.+        ..+||+.+.++|+.+|||.-|.+                |  ..
T Consensus        70 ~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiTyfGr~----------------f--T~  131 (668)
T COG4946          70 KPLRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRITYFGRR----------------F--TR  131 (668)
T ss_pred             CeeEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEEEeccc----------------c--ce
Confidence            33566654 4458999999999999954        24899999999999999986532                1  12


Q ss_pred             ceEEccCCCEEEEE
Q psy7767         159 TLWFSPDGSILAYM  172 (200)
Q Consensus       159 ~~~WSPDGk~Laf~  172 (200)
                      -.-|+|||+-|++.
T Consensus       132 VaG~~~dg~iiV~T  145 (668)
T COG4946         132 VAGWIPDGEIIVST  145 (668)
T ss_pred             eeccCCCCCEEEEe
Confidence            24599999987765

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=97.37  E-value=0.0004  Score=43.05  Aligned_cols=27  Identities=22%  Similarity=0.369  Sum_probs=19.5

Q ss_pred             eecCC-CCCceeeEECcCCCEEEEEEcC
Q psy7767          90 SDLDG-SNFLQLVQWSPVGHDLIFVKDN  116 (200)
Q Consensus        90 ~~lt~-~~~is~~~wSPDGk~IAFV~~g  116 (200)
                      ++++. ......|.|||||++|+|+++.
T Consensus         2 ~~~t~~~~~~~~p~~SpDGk~i~f~s~~   29 (39)
T PF07676_consen    2 KQLTNSPGDDGSPAWSPDGKYIYFTSNR   29 (39)
T ss_dssp             EEES-SSSSEEEEEE-TTSSEEEEEEEC
T ss_pred             cCcccCCccccCEEEecCCCEEEEEecC
Confidence            44554 3456999999999999999754

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>KOG2394|consensus

Probab=97.36  E-value=0.00066  Score=65.13  Aligned_cols=80  Identities=21%  Similarity=0.224  Sum_probs=47.1

Q ss_pred             ceeecCC-CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767          88 DVSDLDG-SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD  165 (200)
Q Consensus        88 ~v~~lt~-~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD  165 (200)
                      .+.+... ...+....+||||+.||-|. ++-|-+-+.+.-+..-+-.      .+            |+..--+.||||
T Consensus       282 Pv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mk------SY------------FGGLLCvcWSPD  343 (636)
T KOG2394|consen  282 PVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMK------SY------------FGGLLCVCWSPD  343 (636)
T ss_pred             ccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHH------hh------------ccceEEEEEcCC
Confidence            3444433 34678999999999999996 3444444443211111110      01            344456799999


Q ss_pred             CCEEEEEEEcCCcceEEEEEe
Q psy7767         166 GSILAYMKFNDARVHNMSYIH  186 (200)
Q Consensus       166 Gk~Laf~r~D~s~v~~~~i~~  186 (200)
                      ||+|+ .-..+..|.++.+..
T Consensus       344 GKyIv-tGGEDDLVtVwSf~e  363 (636)
T KOG2394|consen  344 GKYIV-TGGEDDLVTVWSFEE  363 (636)
T ss_pred             ccEEE-ecCCcceEEEEEecc
Confidence            99986 334445666665543

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=97.35  E-value=0.0031  Score=60.25  Aligned_cols=62  Identities=16%  Similarity=0.207  Sum_probs=50.8

Q ss_pred             CCCceeeEECcCCCEEEEEE-----cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-----DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-----~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      .+-+.+..|||++++|||..     ...|-+.++++++...+|+.-.                   .+.+++|-|||++|
T Consensus       443 ~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta-------------------~DfsPaFD~d~ryL  503 (668)
T COG4946         443 YGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTA-------------------YDFSPAFDPDGRYL  503 (668)
T ss_pred             cceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcc-------------------cccCcccCCCCcEE
Confidence            35679999999999999995     2467778889999999987432                   56689999999999


Q ss_pred             EEEEEc
Q psy7767         170 AYMKFN  175 (200)
Q Consensus       170 af~r~D  175 (200)
                      .|++.+
T Consensus       504 YfLs~R  509 (668)
T COG4946         504 YFLSAR  509 (668)
T ss_pred             EEEecc
Confidence            999643

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=97.24  E-value=0.0013  Score=61.11  Aligned_cols=75  Identities=29%  Similarity=0.357  Sum_probs=44.2

Q ss_pred             CCCccceeecCCCC------CceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeee
Q psy7767          83 PDTLTDVSDLDGSN------FLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEE  152 (200)
Q Consensus        83 ~~~~~~v~~lt~~~------~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEE  152 (200)
                      +-+...|++||+..      ......|.+||+++.|..+    .++|.+++++++..|||.....               
T Consensus        17 ~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~---------------   81 (386)
T PF14583_consen   17 PDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGD---------------   81 (386)
T ss_dssp             TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B---------------
T ss_pred             CCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCC---------------
Confidence            54566888998633      3467899999999999874    4899999999999999985421               


Q ss_pred             eeCCCcceEEccCCCEEEEEEEc
Q psy7767         153 VFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus       153 i~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                         ...+..+||+++.|.|++..
T Consensus        82 ---~~~g~~~s~~~~~~~Yv~~~  101 (386)
T PF14583_consen   82 ---NTFGGFLSPDDRALYYVKNG  101 (386)
T ss_dssp             ----TTT-EE-TTSSEEEEEETT
T ss_pred             ---CccceEEecCCCeEEEEECC
Confidence               12245789999999998643

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.15  E-value=0.0021  Score=62.47  Aligned_cols=57  Identities=14%  Similarity=0.022  Sum_probs=44.6

Q ss_pred             CCceeeEECcCCCEEEEEEc---------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          96 NFLQLVQWSPVGHDLIFVKD---------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~---------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      ..+.++++||||+.+||+..         ..||+.+. ++..+++|. |.                   ....++|||||
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~-g~-------------------~~t~PsWspDG  408 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLE-GH-------------------SLTRPSWSLDA  408 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeec-CC-------------------CCCCceECCCC
Confidence            45789999999999999982         37999886 455577775 32                   35678999999


Q ss_pred             CEEEEEE
Q psy7767         167 SILAYMK  173 (200)
Q Consensus       167 k~Laf~r  173 (200)
                      +.|+|+.
T Consensus       409 ~~lw~v~  415 (591)
T PRK13616        409 DAVWVVV  415 (591)
T ss_pred             CceEEEe
Confidence            9888885

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.06  E-value=0.023  Score=50.96  Aligned_cols=94  Identities=16%  Similarity=0.103  Sum_probs=66.8

Q ss_pred             CcceeEEEEEeeeeeeeeeecCCCCccceeecCCCC-Cc-eeeEECcCCCEEEEEEcC------cEEEEECC-CCCeEEE
Q psy7767          61 DIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGSN-FL-QLVQWSPVGHDLIFVKDN------NLYQAYDD-FRSINAL  131 (200)
Q Consensus        61 ~~~~kv~i~~n~~~~R~s~~a~~~~~~~v~~lt~~~-~i-s~~~wSPDGk~IAFV~~g------dLyv~~~~-~g~~~rL  131 (200)
                      .....++|....+|-+|.|.-+.- ....+.+|.+. .+ .-+.|+++++.|.|+...      +||..+++ ++..++|
T Consensus       245 ~~~~~~l~~s~~~G~~hly~~~~~-~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~L  323 (353)
T PF00930_consen  245 PDGNEFLWISERDGYRHLYLYDLD-GGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCL  323 (353)
T ss_dssp             TTSSEEEEEEETTSSEEEEEEETT-SSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEES
T ss_pred             CCCCEEEEEEEcCCCcEEEEEccc-ccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEec
Confidence            334445566655666888777774 44567788653 44 468999999999999864      89999999 8999999


Q ss_pred             eeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767         132 TRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus       132 T~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      |.....                   ...+.+||||++++-...
T Consensus       324 T~~~~~-------------------~~~~~~Spdg~y~v~~~s  347 (353)
T PF00930_consen  324 TCEDGD-------------------HYSASFSPDGKYYVDTYS  347 (353)
T ss_dssp             STTSST-------------------TEEEEE-TTSSEEEEEEE
T ss_pred             cCCCCC-------------------ceEEEECCCCCEEEEEEc
Confidence            986531                   136899999999876543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>KOG0318|consensus

Probab=96.88  E-value=0.0092  Score=57.32  Aligned_cols=74  Identities=19%  Similarity=0.214  Sum_probs=50.3

Q ss_pred             CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ..++...++||||+..|=+ .++.+|+.+-.+|+..-...+....               -|...+++||||+++|+-+.
T Consensus       190 skFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aH---------------kGsIfalsWsPDs~~~~T~S  254 (603)
T KOG0318|consen  190 SKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAH---------------KGSIFALSWSPDSTQFLTVS  254 (603)
T ss_pred             ccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCc---------------cccEEEEEECCCCceEEEec
Confidence            4567899999999998888 4788999976655544332222111               13456899999999998776


Q ss_pred             EcCCcceEEEE
Q psy7767         174 FNDARVHNMSY  184 (200)
Q Consensus       174 ~D~s~v~~~~i  184 (200)
                      .|.+ .+++.+
T Consensus       255 aDkt-~KIWdV  264 (603)
T KOG0318|consen  255 ADKT-IKIWDV  264 (603)
T ss_pred             CCce-EEEEEe
Confidence            5543 444444

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.78  E-value=0.0052  Score=55.61  Aligned_cols=98  Identities=20%  Similarity=0.230  Sum_probs=56.7

Q ss_pred             EEEeccCcceeEEEEEeeee---eeeeeecCCCCccceeecCCCC---CceeeEECcCCCEEEEEE--cC----cEEEEE
Q psy7767          55 YLQRSTDIALKLSIRCLTWK---QSHSLSGRPDTLTDVSDLDGSN---FLQLVQWSPVGHDLIFVK--DN----NLYQAY  122 (200)
Q Consensus        55 y~~~~~~~~~kv~i~~n~~~---~R~s~~a~~~~~~~v~~lt~~~---~is~~~wSPDGk~IAFV~--~g----dLyv~~  122 (200)
                      |....++..+.+.++.....   .....      +-++..+..+.   .+...++||||+.|||..  +|    .|++.+
T Consensus        83 ~~~~~~~~~~~~~~r~~~~~~~~~~~ev------llD~n~l~~~~~~~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~D  156 (414)
T PF02897_consen   83 YSRNQGGKNYPVLYRRKTDEEDGPEEEV------LLDPNELAKDGGYVSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFD  156 (414)
T ss_dssp             EEEE-SS-SS-EEEEEETTS-TS-C-EE------EEEGGGGSTTSS-EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEE
T ss_pred             EEEEcCCCceEEEEEEecccCCCCceEE------EEcchHhhccCceEEeeeeeECCCCCEEEEEecCCCCceEEEEEEE
Confidence            34446677777777766541   11011      11222232222   224679999999999995  33    589999


Q ss_pred             CCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767         123 DDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA  177 (200)
Q Consensus       123 ~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s  177 (200)
                      +++|+..   .++-..                ....++.|++||+.|.|.+.++.
T Consensus       157 l~tg~~l---~d~i~~----------------~~~~~~~W~~d~~~~~y~~~~~~  192 (414)
T PF02897_consen  157 LETGKFL---PDGIEN----------------PKFSSVSWSDDGKGFFYTRFDED  192 (414)
T ss_dssp             TTTTEEE---EEEEEE----------------EESEEEEECTTSSEEEEEECSTT
T ss_pred             CCCCcCc---CCcccc----------------cccceEEEeCCCCEEEEEEeCcc
Confidence            9888432   211100                01223899999999999998875

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=96.67  E-value=0.0051  Score=62.32  Aligned_cols=63  Identities=22%  Similarity=0.162  Sum_probs=46.4

Q ss_pred             CCEEEEEEc--CcEEEEECCCCCeEEE-eeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE-EEEcC--Ccce
Q psy7767         107 GHDLIFVKD--NNLYQAYDDFRSINAL-TRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY-MKFND--ARVH  180 (200)
Q Consensus       107 Gk~IAFV~~--gdLyv~~~~~g~~~rL-T~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf-~r~D~--s~v~  180 (200)
                      ..+||||.+  ++|.+.|.++...++| +.+..                   ....|.|||||++||| +....  +...
T Consensus       318 ~tkiAfv~~~~~~L~~~D~dG~n~~~ve~~~~~-------------------~i~sP~~SPDG~~vAY~ts~e~~~g~s~  378 (912)
T TIGR02171       318 KAKLAFRNDVTGNLAYIDYTKGASRAVEIEDTI-------------------SVYHPDISPDGKKVAFCTGIEGLPGKSS  378 (912)
T ss_pred             eeeEEEEEcCCCeEEEEecCCCCceEEEecCCC-------------------ceecCcCCCCCCEEEEEEeecCCCCCce
Confidence            368999985  5999999998888888 66543                   2336899999999999 66665  4555


Q ss_pred             EEEEEeeC
Q psy7767         181 NMSYIHYG  188 (200)
Q Consensus       181 ~~~i~~~~  188 (200)
                      +|...+..
T Consensus       379 vYv~~L~t  386 (912)
T TIGR02171       379 VYVRNLNA  386 (912)
T ss_pred             EEEEehhc
Confidence            55544443

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>PRK10115 protease 2; Provisional

Probab=96.35  E-value=0.011  Score=58.43  Aligned_cols=57  Identities=11%  Similarity=0.093  Sum_probs=42.8

Q ss_pred             ceeeEECcCCCEEEEEEcC------cEEEEECCCCC--eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          98 LQLVQWSPVGHDLIFVKDN------NLYQAYDDFRS--INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~g------dLyv~~~~~g~--~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      +....|||||+.|||..+.      +|++.++++|.  ...+..                      ....+.|+|||+.|
T Consensus       129 l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~----------------------~~~~~~w~~D~~~~  186 (686)
T PRK10115        129 LGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN----------------------VEPSFVWANDSWTF  186 (686)
T ss_pred             EeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC----------------------cceEEEEeeCCCEE
Confidence            5778999999999999742      69999988775  222221                      11347999999999


Q ss_pred             EEEEEcC
Q psy7767         170 AYMKFND  176 (200)
Q Consensus       170 af~r~D~  176 (200)
                      +|.+.++
T Consensus       187 ~y~~~~~  193 (686)
T PRK10115        187 YYVRKHP  193 (686)
T ss_pred             EEEEecC
Confidence            9998864

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.25  E-value=0.068  Score=46.28  Aligned_cols=73  Identities=18%  Similarity=0.098  Sum_probs=44.2

Q ss_pred             CceeeEECcCCCEEEEEE----cCcEEEEECC---CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          97 FLQLVQWSPVGHDLIFVK----DNNLYQAYDD---FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~----~gdLyv~~~~---~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      .+..+++||||.++|++.    ++.||+..+.   +|....++..-.  + ...        + .....++.|++|++-+
T Consensus       113 ~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~--~-~~~--------~-~~~v~~v~W~~~~~L~  180 (253)
T PF10647_consen  113 RITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRR--V-APP--------L-LSDVTDVAWSDDSTLV  180 (253)
T ss_pred             ceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceE--e-ccc--------c-cCcceeeeecCCCEEE
Confidence            789999999999999999    7899997554   232333332110  0 000        0 1245689999999644


Q ss_pred             EEEEEcCCcceE
Q psy7767         170 AYMKFNDARVHN  181 (200)
Q Consensus       170 af~r~D~s~v~~  181 (200)
                      +..+.....+..
T Consensus       181 V~~~~~~~~~~~  192 (253)
T PF10647_consen  181 VLGRSAGGPVVR  192 (253)
T ss_pred             EEeCCCCCceeE
Confidence            433444343333

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=96.02  E-value=0.039  Score=45.64  Aligned_cols=66  Identities=14%  Similarity=0.045  Sum_probs=41.7

Q ss_pred             eeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767          99 QLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND  176 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~  176 (200)
                      ..+.+||||+.+....  ++.|.+.++++++..+....+.                   ....+.|+|||++|+....++
T Consensus       210 ~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-------------------~~~~~~~~~~g~~l~~~~~~~  270 (300)
T TIGR03866       210 VGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQ-------------------RVWQLAFTPDEKYLLTTNGVS  270 (300)
T ss_pred             cceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCC-------------------CcceEEECCCCCEEEEEcCCC
Confidence            4578999999864433  3568888887766543322221                   234688999999886544444


Q ss_pred             CcceEEE
Q psy7767         177 ARVHNMS  183 (200)
Q Consensus       177 s~v~~~~  183 (200)
                      +.+..+.
T Consensus       271 ~~i~v~d  277 (300)
T TIGR03866       271 NDVSVID  277 (300)
T ss_pred             CeEEEEE
Confidence            5455444

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG1539|consensus

Probab=96.02  E-value=0.041  Score=55.29  Aligned_cols=67  Identities=22%  Similarity=0.241  Sum_probs=51.1

Q ss_pred             CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ++.+.++.+||||+||+-... +-|.+.|+.++... -+.-+.                    -..++++||+|..||-+
T Consensus       576 ~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~--------------------~~~sls~SPngD~LAT~  635 (910)
T KOG1539|consen  576 GNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDS--------------------PCTSLSFSPNGDFLATV  635 (910)
T ss_pred             ccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCC--------------------cceeeEECCCCCEEEEE
Confidence            677899999999999998864 78999999877653 222111                    23478999999999999


Q ss_pred             EEcCCcceE
Q psy7767         173 KFNDARVHN  181 (200)
Q Consensus       173 r~D~s~v~~  181 (200)
                      ..|+.++-.
T Consensus       636 Hvd~~gIyl  644 (910)
T KOG1539|consen  636 HVDQNGIYL  644 (910)
T ss_pred             EecCceEEE
Confidence            888765443

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=96.00  E-value=0.17  Score=41.84  Aligned_cols=67  Identities=15%  Similarity=0.096  Sum_probs=41.2

Q ss_pred             CceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ....+.|+|||+.++.+.  ++.|++.+..+++..+....+.                   ....+.|+|||+.|+....
T Consensus        32 ~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------------------~~~~~~~~~~g~~l~~~~~   92 (300)
T TIGR03866        32 RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-------------------DPELFALHPNGKILYIANE   92 (300)
T ss_pred             CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-------------------CccEEEECCCCCEEEEEcC
Confidence            356689999999875554  3578888888776543222121                   1235689999987754433


Q ss_pred             cCCcceEE
Q psy7767         175 NDARVHNM  182 (200)
Q Consensus       175 D~s~v~~~  182 (200)
                      +++.+..+
T Consensus        93 ~~~~l~~~  100 (300)
T TIGR03866        93 DDNLVTVI  100 (300)
T ss_pred             CCCeEEEE
Confidence            34434333

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG2139|consensus

Probab=95.50  E-value=0.13  Score=47.94  Aligned_cols=63  Identities=21%  Similarity=0.357  Sum_probs=38.5

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEE-CC-CC-CeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAY-DD-FR-SINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~-~~-~g-~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      .++++.++|||||.++--..-..+|..- .. .- ..+.++-.|                    +..+..|||+|++|.|
T Consensus       238 lgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsg--------------------rvqtacWspcGsfLLf  297 (445)
T KOG2139|consen  238 LGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSG--------------------RVQTACWSPCGSFLLF  297 (445)
T ss_pred             CCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCC--------------------ceeeeeecCCCCEEEE
Confidence            5778999999999997444333333321 11 11 122333222                    3446689999999999


Q ss_pred             EEEcCC
Q psy7767         172 MKFNDA  177 (200)
Q Consensus       172 ~r~D~s  177 (200)
                      +...+.
T Consensus       298 ~~sgsp  303 (445)
T KOG2139|consen  298 ACSGSP  303 (445)
T ss_pred             EEcCCc
Confidence            866554

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=95.40  E-value=0.15  Score=40.25  Aligned_cols=71  Identities=17%  Similarity=0.112  Sum_probs=46.9

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..+.|+|+|+.|++.. ++.|.+.+++++..........                  .....+.|+|+++.|+...
T Consensus         9 ~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~l~~~~   70 (289)
T cd00200           9 TGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHT------------------GPVRDVAASADGTYLASGS   70 (289)
T ss_pred             CCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCC------------------cceeEEEECCCCCEEEEEc
Confidence            35689999999999999987 7789998887665332222111                  0223678999998776553


Q ss_pred             EcCCcceEEEE
Q psy7767         174 FNDARVHNMSY  184 (200)
Q Consensus       174 ~D~s~v~~~~i  184 (200)
                       .++.+..+.+
T Consensus        71 -~~~~i~i~~~   80 (289)
T cd00200          71 -SDKTIRLWDL   80 (289)
T ss_pred             -CCCeEEEEEc
Confidence             3444544443

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.23  E-value=0.23  Score=42.95  Aligned_cols=72  Identities=15%  Similarity=0.104  Sum_probs=40.7

Q ss_pred             CCCCceeeEECcCCCEEEEEEcCcEEEE--ECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVKDNNLYQA--YDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~~gdLyv~--~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      .+..+..|+|+|+|...++..+...-..  +...+...++.-+..               +.-+...++.+||||.++|+
T Consensus        64 ~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~---------------~~~~~I~~l~vSpDG~RvA~  128 (253)
T PF10647_consen   64 TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWP---------------GLRGRITALRVSPDGTRVAV  128 (253)
T ss_pred             cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEeccc---------------ccCCceEEEEECCCCcEEEE
Confidence            4567899999999776666554332221  112222222221110               00013568999999999999


Q ss_pred             EEEcCCcce
Q psy7767         172 MKFNDARVH  180 (200)
Q Consensus       172 ~r~D~s~v~  180 (200)
                      +..+....+
T Consensus       129 v~~~~~~~~  137 (253)
T PF10647_consen  129 VVEDGGGGR  137 (253)
T ss_pred             EEecCCCCe
Confidence            976544433

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171

Probab=95.19  E-value=0.051  Score=55.31  Aligned_cols=65  Identities=12%  Similarity=0.033  Sum_probs=42.1

Q ss_pred             cCcceeEEEEEeeeeeeeeeecCCCCccceee--cCCCCCceeeEECcCCCEEEE-EE--c----CcEEEEECCCCC
Q psy7767          60 TDIALKLSIRCLTWKQSHSLSGRPDTLTDVSD--LDGSNFLQLVQWSPVGHDLIF-VK--D----NNLYQAYDDFRS  127 (200)
Q Consensus        60 ~~~~~kv~i~~n~~~~R~s~~a~~~~~~~v~~--lt~~~~is~~~wSPDGk~IAF-V~--~----gdLyv~~~~~g~  127 (200)
                      +.+-.|++.+....+  ....+++. ....+.  +..+..+..|+|||||++||| |.  +    ..||+.++++..
T Consensus       315 ~~f~tkiAfv~~~~~--~L~~~D~d-G~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~  388 (912)
T TIGR02171       315 GTYKAKLAFRNDVTG--NLAYIDYT-KGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASG  388 (912)
T ss_pred             ccceeeEEEEEcCCC--eEEEEecC-CCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccC
Confidence            345667777765333  44445553 222222  345677899999999999999 63  2    269999988643

This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=95.16  E-value=0.17  Score=39.83  Aligned_cols=71  Identities=18%  Similarity=0.167  Sum_probs=48.6

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..+.|+|+++.++... ++.|++.++..++..+......                  +....+.|+|||+.|++..
T Consensus       135 ~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~l~~~~  196 (289)
T cd00200         135 TDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHT------------------GEVNSVAFSPDGEKLLSSS  196 (289)
T ss_pred             CCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCc------------------cccceEEECCCcCEEEEec
Confidence            34689999999998888877 8899999887655433332111                  1345789999998887664


Q ss_pred             EcCCcceEEEE
Q psy7767         174 FNDARVHNMSY  184 (200)
Q Consensus       174 ~D~s~v~~~~i  184 (200)
                      . ++.+..+.+
T Consensus       197 ~-~~~i~i~d~  206 (289)
T cd00200         197 S-DGTIKLWDL  206 (289)
T ss_pred             C-CCcEEEEEC
Confidence            4 455555543

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=94.80  E-value=0.28  Score=44.95  Aligned_cols=70  Identities=19%  Similarity=0.229  Sum_probs=40.8

Q ss_pred             ceeecCCCCC-ceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          88 DVSDLDGSNF-LQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        88 ~v~~lt~~~~-is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      .+.++..+.. ...+.+||||+++ ||.  ++.|-+.|+.+++..+-...|.                   ...++..||
T Consensus        28 ~~~~i~~~~~~h~~~~~s~Dgr~~-yv~~rdg~vsviD~~~~~~v~~i~~G~-------------------~~~~i~~s~   87 (369)
T PF02239_consen   28 VVARIPTGGAPHAGLKFSPDGRYL-YVANRDGTVSVIDLATGKVVATIKVGG-------------------NPRGIAVSP   87 (369)
T ss_dssp             EEEEEE-STTEEEEEE-TT-SSEE-EEEETTSEEEEEETTSSSEEEEEE-SS-------------------EEEEEEE--
T ss_pred             EEEEEcCCCCceeEEEecCCCCEE-EEEcCCCeEEEEECCcccEEEEEecCC-------------------CcceEEEcC
Confidence            3445544433 3567899999984 554  4578888998877653334342                   234688999


Q ss_pred             CCCEEEEEEEcCC
Q psy7767         165 DGSILAYMKFNDA  177 (200)
Q Consensus       165 DGk~Laf~r~D~s  177 (200)
                      ||++|+-......
T Consensus        88 DG~~~~v~n~~~~  100 (369)
T PF02239_consen   88 DGKYVYVANYEPG  100 (369)
T ss_dssp             TTTEEEEEEEETT
T ss_pred             CCCEEEEEecCCC
Confidence            9998865544433

...

>KOG4497|consensus

Probab=94.79  E-value=0.12  Score=47.70  Aligned_cols=86  Identities=19%  Similarity=0.213  Sum_probs=46.3

Q ss_pred             eeEECcCCCEEEEEEcCcEEEEECCCCCeEEE------------e-----------eCCCcceEecccccceeee-eeeC
Q psy7767         100 LVQWSPVGHDLIFVKDNNLYQAYDDFRSINAL------------T-----------RDGIKGVLFNGVADWVYEE-EVFS  155 (200)
Q Consensus       100 ~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rL------------T-----------~dg~~~~~~nG~pdwv~eE-Ei~~  155 (200)
                      ...+||+|++||-..+..|-+.+.++-+..|+            .           .+|.-.+..--.|+|-..- |--.
T Consensus        13 ~c~fSp~g~yiAs~~~yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~a   92 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRYRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQA   92 (447)
T ss_pred             ceeECCCCCeeeeeeeeEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCC
Confidence            56899999999998877777776554332110            0           1111011112234444311 1112


Q ss_pred             CCcceEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767         156 STKTLWFSPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       156 ~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      .-++.+|||||+.|.-...=+..+.++.+.
T Consensus        93 gls~~~WSPdgrhiL~tseF~lriTVWSL~  122 (447)
T KOG4497|consen   93 GLSSISWSPDGRHILLTSEFDLRITVWSLN  122 (447)
T ss_pred             cceeeeECCCcceEeeeecceeEEEEEEec
Confidence            346789999999887664433444444443

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=94.77  E-value=0.65  Score=42.73  Aligned_cols=59  Identities=14%  Similarity=0.060  Sum_probs=40.1

Q ss_pred             CCceeeEECcCCCEEEEEEc------------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          96 NFLQLVQWSPVGHDLIFVKD------------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~------------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      .+.+-++++|||+++ ||..            +.|++.|..+++...-...|.                   ...++.+|
T Consensus       248 ~g~q~ia~~~dg~~l-yV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~-------------------~~~~iavS  307 (352)
T TIGR02658       248 GGWQQVAYHRARDRI-YLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGH-------------------EIDSINVS  307 (352)
T ss_pred             CcceeEEEcCCCCEE-EEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCC-------------------ceeeEEEC
Confidence            344558999999996 5532            579999887776553333332                   34478999


Q ss_pred             cCCCEEEEEEE
Q psy7767         164 PDGSILAYMKF  174 (200)
Q Consensus       164 PDGk~Laf~r~  174 (200)
                      |||+-++|+..
T Consensus       308 ~Dgkp~lyvtn  318 (352)
T TIGR02658       308 QDAKPLLYALS  318 (352)
T ss_pred             CCCCeEEEEeC
Confidence            99996667644

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=94.69  E-value=0.16  Score=47.32  Aligned_cols=75  Identities=15%  Similarity=-0.055  Sum_probs=49.6

Q ss_pred             CcceeEEEEEeeeeeeeeeecCCCCccceeecCCCC--CceeeEECcCCCEEEEEEcC-cEEEEECCCCCeEEEeeCCC
Q psy7767          61 DIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGSN--FLQLVQWSPVGHDLIFVKDN-NLYQAYDDFRSINALTRDGI  136 (200)
Q Consensus        61 ~~~~kv~i~~n~~~~R~s~~a~~~~~~~v~~lt~~~--~is~~~wSPDGk~IAFV~~g-dLyv~~~~~g~~~rLT~dg~  136 (200)
                      ..-.|+++..+.++.|+.|.-+-. ..++++||++.  ......+||+++.|.|+.++ +|+..++++++.+.|-.-++
T Consensus        45 ~dG~kllF~s~~dg~~nly~lDL~-t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~  122 (386)
T PF14583_consen   45 DDGRKLLFASDFDGNRNLYLLDLA-TGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPD  122 (386)
T ss_dssp             TTS-EEEEEE-TTSS-EEEEEETT-T-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--T
T ss_pred             CCCCEEEEEeccCCCcceEEEEcc-cCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCc
Confidence            557889999998888888888775 55778888643  33468999999999999864 89999999998887776553

>KOG0318|consensus

Probab=94.68  E-value=0.15  Score=49.19  Aligned_cols=97  Identities=16%  Similarity=0.116  Sum_probs=59.8

Q ss_pred             eeeeeeeeecCCCCccceee-cCCCCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeE--EEeeCCCcceEecccccc
Q psy7767          72 TWKQSHSLSGRPDTLTDVSD-LDGSNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSIN--ALTRDGIKGVLFNGVADW  147 (200)
Q Consensus        72 ~~~~R~s~~a~~~~~~~v~~-lt~~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~--rLT~dg~~~~~~nG~pdw  147 (200)
                      ++++-|.|..+...+..... +.-.+.++..++||||+.+|-. ..+.+-+.++.+.+..  +.+..-            
T Consensus       463 ~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHt------------  530 (603)
T KOG0318|consen  463 QDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHT------------  530 (603)
T ss_pred             ccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeee------------
Confidence            34446666666642322222 2236788999999999999877 4567777887766551  222110            


Q ss_pred             eeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeC
Q psy7767         148 VYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYG  188 (200)
Q Consensus       148 v~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~  188 (200)
                             .+...++||||.+.||--..| +.+-+|.+..++
T Consensus       531 -------akI~~~aWsP~n~~vATGSlD-t~Viiysv~kP~  563 (603)
T KOG0318|consen  531 -------AKINCVAWSPNNKLVATGSLD-TNVIIYSVKKPA  563 (603)
T ss_pred             -------eeEEEEEeCCCceEEEecccc-ceEEEEEccChh
Confidence                   245678999999988754444 345555544443

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=94.57  E-value=0.15  Score=45.60  Aligned_cols=63  Identities=21%  Similarity=0.248  Sum_probs=43.5

Q ss_pred             eEECcCCCEEEEEEcCcEEEEECCCCC--e---EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767         101 VQWSPVGHDLIFVKDNNLYQAYDDFRS--I---NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus       101 ~~wSPDGk~IAFV~~gdLyv~~~~~g~--~---~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      ++.++||+.||-+.+.-|-+.+..+.-  .   -++-.|..        |          +-+-+.||||+..|||.+..
T Consensus         3 ~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~--------P----------QWRkl~WSpD~tlLa~a~S~   64 (282)
T PF15492_consen    3 LALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPN--------P----------QWRKLAWSPDCTLLAYAEST   64 (282)
T ss_pred             eeecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCC--------c----------hheEEEECCCCcEEEEEcCC
Confidence            578999999999999988888766532  1   24444432        3          34568999999999997543


Q ss_pred             CCcceEE
Q psy7767         176 DARVHNM  182 (200)
Q Consensus       176 ~s~v~~~  182 (200)
                       +.+..|
T Consensus        65 -G~i~vf   70 (282)
T PF15492_consen   65 -GTIRVF   70 (282)
T ss_pred             -CeEEEE
Confidence             334444

>KOG1446|consensus

Probab=94.41  E-value=0.31  Score=44.21  Aligned_cols=74  Identities=16%  Similarity=0.242  Sum_probs=48.8

Q ss_pred             CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ..+...+.+|||||.|....+ +.+|+.+.-+|+... |..+.+    |+.          ...-+..|+|||+.| +.-
T Consensus       187 ~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~-tfs~~~----~~~----------~~~~~a~ftPds~Fv-l~g  250 (311)
T KOG1446|consen  187 EAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKS-TFSGYP----NAG----------NLPLSATFTPDSKFV-LSG  250 (311)
T ss_pred             ccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEee-eEeecc----CCC----------CcceeEEECCCCcEE-EEe
Confidence            456789999999999998865 468999888887432 211211    000          122467899999866 455


Q ss_pred             EcCCcceEEEE
Q psy7767         174 FNDARVHNMSY  184 (200)
Q Consensus       174 ~D~s~v~~~~i  184 (200)
                      .+++.+..+.+
T Consensus       251 s~dg~i~vw~~  261 (311)
T KOG1446|consen  251 SDDGTIHVWNL  261 (311)
T ss_pred             cCCCcEEEEEc
Confidence            66666666655

>KOG2139|consensus

Probab=94.41  E-value=0.19  Score=46.78  Aligned_cols=69  Identities=23%  Similarity=0.261  Sum_probs=48.4

Q ss_pred             eeecCCCCCceeeEECcCCCEEEEEEcC--cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          89 VSDLDGSNFLQLVQWSPVGHDLIFVKDN--NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        89 v~~lt~~~~is~~~wSPDGk~IAFV~~g--dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      +-+......+..++|.|||..++=.+-+  .+-+.+.+.|.-.+|-..|-                  |..+-+.|||||
T Consensus       189 vl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~gl------------------gg~slLkwSPdg  250 (445)
T KOG2139|consen  189 VLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGL------------------GGFSLLKWSPDG  250 (445)
T ss_pred             heeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCC------------------CceeeEEEcCCC
Confidence            3333334567999999999998877533  57777888887776664331                  345668999999


Q ss_pred             CEEEEEEEc
Q psy7767         167 SILAYMKFN  175 (200)
Q Consensus       167 k~Laf~r~D  175 (200)
                      .+|.-.+.|
T Consensus       251 d~lfaAt~d  259 (445)
T KOG2139|consen  251 DVLFAATCD  259 (445)
T ss_pred             CEEEEeccc
Confidence            988545555

>KOG0973|consensus

Probab=94.38  E-value=0.47  Score=48.66  Aligned_cols=75  Identities=21%  Similarity=0.235  Sum_probs=54.9

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ..++++..||||+..+|-+. ++-|-+.+..+.+...+..+-         +         +...++.|-|-|++|| ..
T Consensus       129 ~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H---------~---------s~VKGvs~DP~Gky~A-Sq  189 (942)
T KOG0973|consen  129 DSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGH---------Q---------SLVKGVSWDPIGKYFA-SQ  189 (942)
T ss_pred             CCccceeccCCCccEEEEecccceEEEEccccceeeeeeecc---------c---------ccccceEECCccCeee-ee
Confidence            67899999999999999885 567888876655333333322         1         3466899999999998 55


Q ss_pred             EcCCcceEEEEEeeC
Q psy7767         174 FNDARVHNMSYIHYG  188 (200)
Q Consensus       174 ~D~s~v~~~~i~~~~  188 (200)
                      .|++-+.++....++
T Consensus       190 sdDrtikvwrt~dw~  204 (942)
T KOG0973|consen  190 SDDRTLKVWRTSDWG  204 (942)
T ss_pred             cCCceEEEEEcccce
Confidence            666778888866543

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=94.34  E-value=0.23  Score=44.36  Aligned_cols=75  Identities=16%  Similarity=0.092  Sum_probs=45.5

Q ss_pred             CceeeEECcCCCEEEEEEcC--cEEEEEC--CCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKDN--NLYQAYD--DFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~g--dLyv~~~--~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....+++||||+.|....++  .|-+.++  ++|....+..-.     ..|           ...+.+.+||||++|+-.
T Consensus       246 ~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~-----~~G-----------~~Pr~~~~s~~g~~l~Va  309 (345)
T PF10282_consen  246 APAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVP-----TGG-----------KFPRHFAFSPDGRYLYVA  309 (345)
T ss_dssp             SEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEE-----ESS-----------SSEEEEEE-TTSSEEEEE
T ss_pred             CceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEe-----CCC-----------CCccEEEEeCCCCEEEEE
Confidence            46889999999986444333  4555555  445554443211     111           135688999999988765


Q ss_pred             EEcCCcceEEEEEee
Q psy7767         173 KFNDARVHNMSYIHY  187 (200)
Q Consensus       173 r~D~s~v~~~~i~~~  187 (200)
                      -.+...+..|.+...
T Consensus       310 ~~~s~~v~vf~~d~~  324 (345)
T PF10282_consen  310 NQDSNTVSVFDIDPD  324 (345)
T ss_dssp             ETTTTEEEEEEEETT
T ss_pred             ecCCCeEEEEEEeCC
Confidence            566677888877533

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=93.89  E-value=1.5  Score=38.21  Aligned_cols=80  Identities=13%  Similarity=0.012  Sum_probs=44.4

Q ss_pred             ceeecCCCCCceeeEECcCCCEEEEEE--cCcEEEEECC-CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          88 DVSDLDGSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDD-FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        88 ~v~~lt~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~-~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      .+..+..++....+++||||+.|+-..  .+.|.+.+++ +|....+....     .            .+....+.++|
T Consensus        27 ~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-----~------------~~~p~~i~~~~   89 (330)
T PRK11028         27 LLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-----L------------PGSPTHISTDH   89 (330)
T ss_pred             eeeEEecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-----C------------CCCceEEEECC
Confidence            334443345677889999999874443  3466655554 23322222110     0            12345688999


Q ss_pred             CCCEEEEEEEcCCcceEEEE
Q psy7767         165 DGSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~~~~i  184 (200)
                      ||++|+-.....+.+..+.+
T Consensus        90 ~g~~l~v~~~~~~~v~v~~~  109 (330)
T PRK11028         90 QGRFLFSASYNANCVSVSPL  109 (330)
T ss_pred             CCCEEEEEEcCCCeEEEEEE
Confidence            99977544444444555544

>KOG0271|consensus

Probab=93.60  E-value=0.64  Score=43.71  Aligned_cols=39  Identities=15%  Similarity=0.242  Sum_probs=26.2

Q ss_pred             ceeecCC-CCCceeeEECcCCCEEEEEE-cCcEEEEECCCC
Q psy7767          88 DVSDLDG-SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFR  126 (200)
Q Consensus        88 ~v~~lt~-~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g  126 (200)
                      .+++++. .+.+....+||||++||-.+ +..|-+.+..+|
T Consensus       359 pi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tG  399 (480)
T KOG0271|consen  359 PITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTG  399 (480)
T ss_pred             chhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCc
Confidence            4556664 45668999999999999885 344444444443

>KOG0271|consensus

Probab=93.37  E-value=0.25  Score=46.34  Aligned_cols=72  Identities=24%  Similarity=0.308  Sum_probs=44.8

Q ss_pred             ccceeecCC-----CCCceeeEECcCCCEEEEEEcC-cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcc
Q psy7767          86 LTDVSDLDG-----SNFLQLVQWSPVGHDLIFVKDN-NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKT  159 (200)
Q Consensus        86 ~~~v~~lt~-----~~~is~~~wSPDGk~IAFV~~g-dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~  159 (200)
                      .+.+++-+.     +..+...+|||||+.||--.+. -+-+.|+++.+ +..|=.|        .-.|+         ..
T Consensus       101 vrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT-p~~t~Kg--------H~~WV---------lc  162 (480)
T KOG0271|consen  101 VRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET-PLFTCKG--------HKNWV---------LC  162 (480)
T ss_pred             ccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC-cceeecC--------CccEE---------EE
Confidence            455665442     4567899999999999876543 35555665432 2233222        22343         25


Q ss_pred             eEEccCCCEEEEEEEc
Q psy7767         160 LWFSPDGSILAYMKFN  175 (200)
Q Consensus       160 ~~WSPDGk~Laf~r~D  175 (200)
                      +.|||||++||=-..|
T Consensus       163 vawsPDgk~iASG~~d  178 (480)
T KOG0271|consen  163 VAWSPDGKKIASGSKD  178 (480)
T ss_pred             EEECCCcchhhccccC
Confidence            7899999999865444

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=93.29  E-value=0.42  Score=40.10  Aligned_cols=61  Identities=21%  Similarity=0.303  Sum_probs=36.0

Q ss_pred             CceeeEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          97 FLQLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      ...+.++.|||+ |.|...          +.||..+.+ ++...+..+                   +....++.|||||
T Consensus        87 ~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~-------------------~~~pNGi~~s~dg  145 (246)
T PF08450_consen   87 RPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG-------------------LGFPNGIAFSPDG  145 (246)
T ss_dssp             EEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE-------------------ESSEEEEEEETTS
T ss_pred             CCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEecC-------------------cccccceEECCcc
Confidence            346788999988 444432          347777665 444433321                   2356788999999


Q ss_pred             CEEEEEEEcCCc
Q psy7767         167 SILAYMKFNDAR  178 (200)
Q Consensus       167 k~Laf~r~D~s~  178 (200)
                      +.|.+.......
T Consensus       146 ~~lyv~ds~~~~  157 (246)
T PF08450_consen  146 KTLYVADSFNGR  157 (246)
T ss_dssp             SEEEEEETTTTE
T ss_pred             hheeecccccce
Confidence            988665444333

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>KOG1524|consensus

Probab=93.26  E-value=0.35  Score=47.22  Aligned_cols=31  Identities=10%  Similarity=0.329  Sum_probs=26.8

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCC
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDF  125 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~  125 (200)
                      +..+..++|.||+..|+|..++.+++.++.-
T Consensus       145 ~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~  175 (737)
T KOG1524|consen  145 EESIRCARWAPNSNSIVFCQGGHISIKPLAA  175 (737)
T ss_pred             CceeEEEEECCCCCceEEecCCeEEEeeccc
Confidence            3457899999999999999999999988753

>KOG1274|consensus

Probab=92.85  E-value=1.5  Score=44.76  Aligned_cols=70  Identities=19%  Similarity=0.241  Sum_probs=43.6

Q ss_pred             CceeeEECcCCCEEEEE-EcCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      -..-++|+|+|.++|+. .++.|-+.+.++.... .|..+-..                 ....-+.|||.|++||-.-.
T Consensus       190 i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~s-----------------s~~~~~~wsPnG~YiAAs~~  252 (933)
T KOG1274|consen  190 ICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSS-----------------SKFSDLQWSPNGKYIAASTL  252 (933)
T ss_pred             eeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccc-----------------cceEEEEEcCCCcEEeeecc
Confidence            34789999996666666 5778888777665543 22222110                 12456789999999986543


Q ss_pred             cCCcceEEEE
Q psy7767         175 NDARVHNMSY  184 (200)
Q Consensus       175 D~s~v~~~~i  184 (200)
                      | +.+-++.+
T Consensus       253 ~-g~I~vWnv  261 (933)
T KOG1274|consen  253 D-GQILVWNV  261 (933)
T ss_pred             C-CcEEEEec
Confidence            3 44544443

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=92.57  E-value=1.1  Score=41.25  Aligned_cols=78  Identities=13%  Similarity=0.182  Sum_probs=51.3

Q ss_pred             CCCceeeEECcCCCEEEEEEcC-----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDN-----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~g-----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ......+.+||||+.| |++++     -+|..+-++|....+.....              |.  ...+.+.++|+|+.|
T Consensus       243 ~~~~aaIhis~dGrFL-YasNRg~dsI~~f~V~~~~g~L~~~~~~~t--------------eg--~~PR~F~i~~~g~~L  305 (346)
T COG2706         243 TNWAAAIHISPDGRFL-YASNRGHDSIAVFSVDPDGGKLELVGITPT--------------EG--QFPRDFNINPSGRFL  305 (346)
T ss_pred             CCceeEEEECCCCCEE-EEecCCCCeEEEEEEcCCCCEEEEEEEecc--------------CC--cCCccceeCCCCCEE
Confidence            4556889999999986 66543     24545555555443332211              11  136788999999998


Q ss_pred             EEEEEcCCcceEEEEEeeCC
Q psy7767         170 AYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       170 af~r~D~s~v~~~~i~~~~~  189 (200)
                      +-+..+...+..|.+.-..+
T Consensus       306 iaa~q~sd~i~vf~~d~~TG  325 (346)
T COG2706         306 IAANQKSDNITVFERDKETG  325 (346)
T ss_pred             EEEccCCCcEEEEEEcCCCc
Confidence            77766667788888776665

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=92.55  E-value=4.4  Score=35.26  Aligned_cols=76  Identities=9%  Similarity=0.032  Sum_probs=41.0

Q ss_pred             CceeeEECcCCCEEEEEE--cCcEEEEECCC-CCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDF-RSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~-g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      .....+++|||+.+..+.  .+.|.+.+++. +.......... . +.-|           .....+.|+|||++|+-+.
T Consensus       127 ~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~-~-~~~g-----------~~p~~~~~~pdg~~lyv~~  193 (330)
T PRK11028        127 GCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEV-T-TVEG-----------AGPRHMVFHPNQQYAYCVN  193 (330)
T ss_pred             cccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCce-e-cCCC-----------CCCceEEECCCCCEEEEEe
Confidence            345668999999875443  35688888764 22110000000 0 0001           1345689999999775443


Q ss_pred             EcCCcceEEEEE
Q psy7767         174 FNDARVHNMSYI  185 (200)
Q Consensus       174 ~D~s~v~~~~i~  185 (200)
                      .....+..+.+.
T Consensus       194 ~~~~~v~v~~~~  205 (330)
T PRK11028        194 ELNSSVDVWQLK  205 (330)
T ss_pred             cCCCEEEEEEEe
Confidence            334555555554

>KOG0293|consensus

Probab=92.39  E-value=0.66  Score=44.01  Aligned_cols=60  Identities=25%  Similarity=0.280  Sum_probs=42.3

Q ss_pred             CCCceeeEECcCCCEEEE-EEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIF-VKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAF-V~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ...+..+.||||.++++= -.+..+.+.++++|+....-..+-      |           .+..+-.|-|||.+++-
T Consensus       269 ~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~------~-----------~S~~sc~W~pDg~~~V~  329 (519)
T KOG0293|consen  269 SQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGL------G-----------FSVSSCAWCPDGFRFVT  329 (519)
T ss_pred             cCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCc------C-----------CCcceeEEccCCceeEe
Confidence            567899999999887643 234568888998888765554431      0           15567789999988653

>KOG0266|consensus

Probab=91.92  E-value=2.4  Score=39.60  Aligned_cols=70  Identities=21%  Similarity=0.213  Sum_probs=50.0

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+....|+|+|+.|+... ++.|.+.++.+++..+......                  +...+++|+|||+.|+-. 
T Consensus       246 ~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs------------------~~is~~~f~~d~~~l~s~-  306 (456)
T KOG0266|consen  246 STYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHS------------------DGISGLAFSPDGNLLVSA-  306 (456)
T ss_pred             CCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccC------------------CceEEEEECCCCCEEEEc-
Confidence            56789999999998887775 5679999999877665554322                  134578899999988755 


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      ..++.+.++.
T Consensus       307 s~d~~i~vwd  316 (456)
T KOG0266|consen  307 SYDGTIRVWD  316 (456)
T ss_pred             CCCccEEEEE
Confidence            3355555554

>KOG0291|consensus

Probab=91.82  E-value=1.9  Score=43.58  Aligned_cols=71  Identities=18%  Similarity=0.111  Sum_probs=43.7

Q ss_pred             CCCCceeeEECcCCCEEEEEEc-Cc-EEEEECCCC-CeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVKD-NN-LYQAYDDFR-SINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~~-gd-Lyv~~~~~g-~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ....+..++.||||..+.-|-. |. +++ ++... ...+.+...                    ...++.|||||+.+|
T Consensus        54 ~~~NI~~ialSp~g~lllavdE~g~~~lv-s~~~r~Vlh~f~fk~--------------------~v~~i~fSPng~~fa  112 (893)
T KOG0291|consen   54 TRYNITRIALSPDGTLLLAVDERGRALLV-SLLSRSVLHRFNFKR--------------------GVGAIKFSPNGKFFA  112 (893)
T ss_pred             cCCceEEEEeCCCceEEEEEcCCCcEEEE-ecccceeeEEEeecC--------------------ccceEEECCCCcEEE
Confidence            3567899999999998877742 33 444 33321 112233221                    345789999999888


Q ss_pred             EEEEcCCcceEEEEEee
Q psy7767         171 YMKFNDARVHNMSYIHY  187 (200)
Q Consensus       171 f~r~D~s~v~~~~i~~~  187 (200)
                      ..+.+  .++++..|..
T Consensus       113 v~~gn--~lqiw~~P~~  127 (893)
T KOG0291|consen  113 VGCGN--LLQIWHAPGE  127 (893)
T ss_pred             EEecc--eeEEEecCcc
Confidence            76544  4566665443

>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]

Probab=91.68  E-value=0.41  Score=46.66  Aligned_cols=61  Identities=30%  Similarity=0.445  Sum_probs=42.5

Q ss_pred             eeecCCCCCceeeEECcCCCEEEEEE-c----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          89 VSDLDGSNFLQLVQWSPVGHDLIFVK-D----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        89 v~~lt~~~~is~~~wSPDGk~IAFV~-~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      +...+.+.....+.|||||+.++|+. .    .++|+.+.. |   .++...                   .......||
T Consensus        53 ~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~-g---~~~~~~-------------------~~v~~~~~~  109 (620)
T COG1506          53 VRLLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVG-G---LITKTA-------------------FGVSDARWS  109 (620)
T ss_pred             ccccccCCcccccccCCCCCEEEEEeccCCCcceEEEEecC-C---ceeeee-------------------cccccceeC
Confidence            34455678889999999999999998 2    368888766 4   222211                   123456788


Q ss_pred             cCCCEEEEE
Q psy7767         164 PDGSILAYM  172 (200)
Q Consensus       164 PDGk~Laf~  172 (200)
                      |+|+.+++.
T Consensus       110 ~~g~~~~~~  118 (620)
T COG1506         110 PDGDRIAFL  118 (620)
T ss_pred             CCCCeEEEE
Confidence            888888883

>KOG1407|consensus

Probab=91.36  E-value=1.7  Score=39.06  Aligned_cols=62  Identities=19%  Similarity=0.235  Sum_probs=40.6

Q ss_pred             CCCceeeEECcCCCEEEEEE-c-CcEEEEECCCCCeEEEe-eCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-D-NNLYQAYDDFRSINALT-RDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~-gdLyv~~~~~g~~~rLT-~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      +..+-.+.|+|...-+.++. + ..|-+.++..++..+-+ +.++                    .....|||||+++++
T Consensus        64 ~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~e--------------------ni~i~wsp~g~~~~~  123 (313)
T KOG1407|consen   64 TDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGE--------------------NINITWSPDGEYIAV  123 (313)
T ss_pred             CcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCc--------------------ceEEEEcCCCCEEEE
Confidence            34567889999755555554 3 35777787777665444 4332                    235789999999998


Q ss_pred             EEEcC
Q psy7767         172 MKFND  176 (200)
Q Consensus       172 ~r~D~  176 (200)
                      .-.|+
T Consensus       124 ~~kdD  128 (313)
T KOG1407|consen  124 GNKDD  128 (313)
T ss_pred             ecCcc
Confidence            75443

>PTZ00420 coronin; Provisional

Probab=91.18  E-value=1.7  Score=42.53  Aligned_cols=68  Identities=10%  Similarity=0.123  Sum_probs=44.1

Q ss_pred             CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|+|+|..++.+.  ++.|-+.++.++........+.                   ...++.|+|||+.|+-.
T Consensus       125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~-------------------~V~SlswspdG~lLat~  185 (568)
T PTZ00420        125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPK-------------------KLSSLKWNIKGNLLSGT  185 (568)
T ss_pred             CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCC-------------------cEEEEEECCCCCEEEEE
Confidence            45688999999998876543  5779899998776432111111                   23478999999988644


Q ss_pred             EEcCCcceEE
Q psy7767         173 KFNDARVHNM  182 (200)
Q Consensus       173 r~D~s~v~~~  182 (200)
                      . .++.+.++
T Consensus       186 s-~D~~IrIw  194 (568)
T PTZ00420        186 C-VGKHMHII  194 (568)
T ss_pred             e-cCCEEEEE
Confidence            3 33334444

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=90.49  E-value=2.2  Score=38.71  Aligned_cols=62  Identities=24%  Similarity=0.174  Sum_probs=39.8

Q ss_pred             ceeeEECc-CCCEEEEEEc--CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          98 LQLVQWSP-VGHDLIFVKD--NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        98 is~~~wSP-DGk~IAFV~~--gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      .-.+..+| ++.-+||.++  .-+++.+..+|+..+....+. +.-+||-               -.|||||++| |+..
T Consensus         7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~-gRHFyGH---------------g~fs~dG~~L-ytTE   69 (305)
T PF07433_consen    7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPP-GRHFYGH---------------GVFSPDGRLL-YTTE   69 (305)
T ss_pred             ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCC-CCEEecC---------------EEEcCCCCEE-EEec
Confidence            34578899 5677777764  367778888888764443332 2225554               3699999877 5544


Q ss_pred             cC
Q psy7767         175 ND  176 (200)
Q Consensus       175 D~  176 (200)
                      ++
T Consensus        70 nd   71 (305)
T PF07433_consen   70 ND   71 (305)
T ss_pred             cc
Confidence            33

>KOG0645|consensus

Probab=90.25  E-value=3.4  Score=37.32  Aligned_cols=64  Identities=20%  Similarity=0.257  Sum_probs=37.8

Q ss_pred             CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+...+|||.|+.||-.+- .-+-+..-.+++-.-++. .|-             |.    ....++||++|.+||-.
T Consensus        61 krsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGH-------------En----EVK~Vaws~sG~~LATC  123 (312)
T KOG0645|consen   61 KRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGH-------------EN----EVKCVAWSASGNYLATC  123 (312)
T ss_pred             hheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeecc-------------cc----ceeEEEEcCCCCEEEEe
Confidence            456899999999999887752 222222222333332222 111             11    23578999999999866


Q ss_pred             EEc
Q psy7767         173 KFN  175 (200)
Q Consensus       173 r~D  175 (200)
                      ..|
T Consensus       124 SRD  126 (312)
T KOG0645|consen  124 SRD  126 (312)
T ss_pred             eCC
Confidence            444

>KOG4497|consensus

Probab=90.25  E-value=1.3  Score=41.09  Aligned_cols=60  Identities=22%  Similarity=0.341  Sum_probs=39.4

Q ss_pred             CCCCceeeEECcCCCEEEEEEcCc--EEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVKDNN--LYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~~gd--Lyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      +..+++...|||||+.|.-...-+  |=+.++.+....-|-. +.                  ....+++|.|||++-|.
T Consensus        90 g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~-pK------------------~~~kg~~f~~dg~f~ai  150 (447)
T KOG4497|consen   90 GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPH-PK------------------TNVKGYAFHPDGQFCAI  150 (447)
T ss_pred             CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecc-cc------------------cCceeEEECCCCceeee
Confidence            356889999999999998887654  3334554433332222 11                  12356899999998776


Q ss_pred             E
Q psy7767         172 M  172 (200)
Q Consensus       172 ~  172 (200)
                      .
T Consensus       151 ~  151 (447)
T KOG4497|consen  151 L  151 (447)
T ss_pred             e
Confidence            6

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=89.87  E-value=3  Score=37.23  Aligned_cols=73  Identities=22%  Similarity=0.215  Sum_probs=37.6

Q ss_pred             ceeeEECcCCCEEEEEEc--CcEEEEECCCCC--eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          98 LQLVQWSPVGHDLIFVKD--NNLYQAYDDFRS--INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~--gdLyv~~~~~g~--~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      .-...++|||+.+.-+-.  ..|++.+++...  ......-.    +..|           ...+.+.|+|||+++..+.
T Consensus       146 ~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~----~~~G-----------~GPRh~~f~pdg~~~Yv~~  210 (345)
T PF10282_consen  146 PHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIK----VPPG-----------SGPRHLAFSPDGKYAYVVN  210 (345)
T ss_dssp             EEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEE----CSTT-----------SSEEEEEE-TTSSEEEEEE
T ss_pred             ceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccc----cccC-----------CCCcEEEEcCCcCEEEEec
Confidence            457789999999844332  357777665443  22111000    0000           2456789999998764333


Q ss_pred             EcCCcceEEEEE
Q psy7767         174 FNDARVHNMSYI  185 (200)
Q Consensus       174 ~D~s~v~~~~i~  185 (200)
                      ...+.+..+.+.
T Consensus       211 e~s~~v~v~~~~  222 (345)
T PF10282_consen  211 ELSNTVSVFDYD  222 (345)
T ss_dssp             TTTTEEEEEEEE
T ss_pred             CCCCcEEEEeec
Confidence            333455555555

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG0315|consensus

Probab=89.86  E-value=3.1  Score=37.32  Aligned_cols=99  Identities=14%  Similarity=0.091  Sum_probs=59.0

Q ss_pred             EEEEeeeeeeeeeecCCC-CccceeecC---C-CCCceeeEECcCCCEEEEEE-cCcEEEEECCCC-CeEEEeeCCCcce
Q psy7767          67 SIRCLTWKQSHSLSGRPD-TLTDVSDLD---G-SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFR-SINALTRDGIKGV  139 (200)
Q Consensus        67 ~i~~n~~~~R~s~~a~~~-~~~~v~~lt---~-~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g-~~~rLT~dg~~~~  139 (200)
                      +...|..|+=+.|..-.- ..+.+++++   . ...+..-.+|||+|.||=.. +..+++.+.++- .....+.      
T Consensus       182 l~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~------  255 (311)
T KOG0315|consen  182 LAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLT------  255 (311)
T ss_pred             EEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEee------
Confidence            344555666555544331 133444443   2 56678889999999998774 557888887764 2222222      


Q ss_pred             EecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEE
Q psy7767         140 LFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       140 ~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i  184 (200)
                         |.+.|+.         .-.||.||++|+-...| ..++.+.+
T Consensus       256 ---gh~rWvW---------dc~FS~dg~YlvTassd-~~~rlW~~  287 (311)
T KOG0315|consen  256 ---GHQRWVW---------DCAFSADGEYLVTASSD-HTARLWDL  287 (311)
T ss_pred             ---cCCceEE---------eeeeccCccEEEecCCC-Cceeeccc
Confidence               3334543         45699999999654444 44555543

>KOG0288|consensus

Probab=89.83  E-value=0.98  Score=42.66  Aligned_cols=59  Identities=20%  Similarity=0.185  Sum_probs=43.7

Q ss_pred             CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      +.+.+-..|||||.++|=- .+|.||++++.+|+.. ++...+..                 .....+.|+|-|+.|+
T Consensus       387 asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~-----------------~aI~s~~W~~sG~~Ll  447 (459)
T KOG0288|consen  387 ASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSN-----------------AAITSLSWNPSGSGLL  447 (459)
T ss_pred             ccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCC-----------------cceEEEEEcCCCchhh
Confidence            4567788999999998766 4789999999988764 45443321                 0234689999999885

>KOG0306|consensus

Probab=89.77  E-value=5.9  Score=40.18  Aligned_cols=135  Identities=19%  Similarity=0.189  Sum_probs=68.2

Q ss_pred             ccccccccc-ceEEEEEEeceeeeceeeeeeeeeeeeeeeeeeecceEEEEeccCcceeEEEEEeeeeeeeeeecCCCCc
Q psy7767           8 ESHQFSHVD-HKIIHIIECGYIRSTDIALKLSIRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTL   86 (200)
Q Consensus         8 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~kv~i~~n~~~~R~s~~a~~~~~   86 (200)
                      ||-.+=-+| ++-|.-|+||||-.        -        -|=.|..|++-.+. .-++.+.--+-            .
T Consensus       394 ~SikiWn~~t~kciRTi~~~y~l~--------~--------~Fvpgd~~Iv~G~k-~Gel~vfdlaS------------~  444 (888)
T KOG0306|consen  394 ESIKIWNRDTLKCIRTITCGYILA--------S--------KFVPGDRYIVLGTK-NGELQVFDLAS------------A  444 (888)
T ss_pred             CcEEEEEccCcceeEEeccccEEE--------E--------EecCCCceEEEecc-CCceEEEEeeh------------h
Confidence            444444455 88899999998632        1        22233334433222 22233322211            2


Q ss_pred             cceeecC-CCCCceeeEECcCCCEEEEEEcC-------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767          87 TDVSDLD-GSNFLQLVQWSPVGHDLIFVKDN-------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTK  158 (200)
Q Consensus        87 ~~v~~lt-~~~~is~~~wSPDGk~IAFV~~g-------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~  158 (200)
                      .-++... -.+.+-.++.+|||+..+-....       ..++.+..+.+.+.|+=...+.+            |+-....
T Consensus       445 ~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL------------el~ddvL  512 (888)
T KOG0306|consen  445 SLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL------------ELEDDVL  512 (888)
T ss_pred             hhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEE------------eccccEE
Confidence            2333332 24667889999999986655432       12333322223233332111111            1001334


Q ss_pred             ceEEccCCCEEEEEEEcCCcceEEEE
Q psy7767         159 TLWFSPDGSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       159 ~~~WSPDGk~Laf~r~D~s~v~~~~i  184 (200)
                      .+..||||+.||..--|. .|.+|.+
T Consensus       513 ~v~~Spdgk~LaVsLLdn-TVkVyfl  537 (888)
T KOG0306|consen  513 CVSVSPDGKLLAVSLLDN-TVKVYFL  537 (888)
T ss_pred             EEEEcCCCcEEEEEeccC-eEEEEEe
Confidence            789999999998765554 3665543

>KOG2315|consensus

Probab=89.73  E-value=4.6  Score=39.40  Aligned_cols=58  Identities=12%  Similarity=0.115  Sum_probs=38.7

Q ss_pred             CCCceeeEECcCCCEEEEEE----cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK----DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~----~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      .+.--.+-|||.|+.|++.-    .|++=+.|+.+  -+.|+.-...                  ...-+.|||||++++
T Consensus       311 egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n--~K~i~~~~a~------------------~tt~~eW~PdGe~fl  370 (566)
T KOG2315|consen  311 EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPN--RKLIAKFKAA------------------NTTVFEWSPDGEYFL  370 (566)
T ss_pred             CCCccceEECCCCCEEEEeecCCCCCceEEEeccc--hhhccccccC------------------CceEEEEcCCCcEEE
Confidence            34446778999999999884    45777777765  4445542211                  223467999999986


Q ss_pred             EE
Q psy7767         171 YM  172 (200)
Q Consensus       171 f~  172 (200)
                      -.
T Consensus       371 TA  372 (566)
T KOG2315|consen  371 TA  372 (566)
T ss_pred             EE
Confidence            44

>KOG0645|consensus

Probab=89.70  E-value=14  Score=33.59  Aligned_cols=88  Identities=20%  Similarity=0.202  Sum_probs=52.2

Q ss_pred             CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCe--------------EEEeeCCCcceEecccc-------------c
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSI--------------NALTRDGIKGVLFNGVA-------------D  146 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~--------------~rLT~dg~~~~~~nG~p-------------d  146 (200)
                      ..++...+||++|..||--.+ ..||+..++.+..              +++.-.+.+.+++-+.-             |
T Consensus       105 EnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~ddd  184 (312)
T KOG0645|consen  105 ENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDD  184 (312)
T ss_pred             ccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCC
Confidence            577899999999999998854 5788887774432              33333332222221111             2


Q ss_pred             ceeeeeeeCC---CcceEEccCCCEEEEEEEcCCcceEEE
Q psy7767         147 WVYEEEVFSS---TKTLWFSPDGSILAYMKFNDARVHNMS  183 (200)
Q Consensus       147 wv~eEEi~~~---~~~~~WSPDGk~Laf~r~D~s~v~~~~  183 (200)
                      |.--..+-++   ...+.|.|+|.+|+ ...|++.+.++.
T Consensus       185 W~c~~tl~g~~~TVW~~~F~~~G~rl~-s~sdD~tv~Iw~  223 (312)
T KOG0645|consen  185 WECVQTLDGHENTVWSLAFDNIGSRLV-SCSDDGTVSIWR  223 (312)
T ss_pred             eeEEEEecCccceEEEEEecCCCceEE-EecCCcceEeee
Confidence            2221111123   34556999999887 456666676665

>KOG0278|consensus

Probab=89.51  E-value=8.7  Score=34.67  Aligned_cols=75  Identities=17%  Similarity=0.228  Sum_probs=44.7

Q ss_pred             ceeecCCCCCceeeEECcCCCEEEEEEcCc---EEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          88 DVSDLDGSNFLQLVQWSPVGHDLIFVKDNN---LYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        88 ~v~~lt~~~~is~~~wSPDGk~IAFV~~gd---Lyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      .+..+.....+..+.++|+-.  .||.+|+   +|..+-.+|...-.-+.|.                 ++-.-.++|||
T Consensus       217 ~lKs~k~P~nV~SASL~P~k~--~fVaGged~~~~kfDy~TgeEi~~~nkgh-----------------~gpVhcVrFSP  277 (334)
T KOG0278|consen  217 LLKSYKMPCNVESASLHPKKE--FFVAGGEDFKVYKFDYNTGEEIGSYNKGH-----------------FGPVHCVRFSP  277 (334)
T ss_pred             ceeeccCccccccccccCCCc--eEEecCcceEEEEEeccCCceeeecccCC-----------------CCceEEEEECC
Confidence            344443456778889999873  4888764   5555666666654422232                 34455789999


Q ss_pred             CCCEEEEEEE-cCCcceEEE
Q psy7767         165 DGSILAYMKF-NDARVHNMS  183 (200)
Q Consensus       165 DGk~Laf~r~-D~s~v~~~~  183 (200)
                      ||.  .|... .++.+.+++
T Consensus       278 dGE--~yAsGSEDGTirlWQ  295 (334)
T KOG0278|consen  278 DGE--LYASGSEDGTIRLWQ  295 (334)
T ss_pred             CCc--eeeccCCCceEEEEE
Confidence            996  45543 334444444

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=89.31  E-value=1.9  Score=32.14  Aligned_cols=66  Identities=12%  Similarity=0.085  Sum_probs=41.4

Q ss_pred             eeEECcCCCEEEEEE-------------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcce
Q psy7767         100 LVQWSPVGHDLIFVK-------------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTL  160 (200)
Q Consensus       100 ~~~wSPDGk~IAFV~-------------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~  160 (200)
                      ++.+++|+..|.|+-                   .|.|+..+..++++..|-.+                   +.-.+++
T Consensus         2 dldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~~~-------------------L~fpNGV   62 (89)
T PF03088_consen    2 DLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLLDG-------------------LYFPNGV   62 (89)
T ss_dssp             EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEEEE-------------------ESSEEEE
T ss_pred             ceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEehhC-------------------CCccCeE
Confidence            456777877777774                   24688788777776655542                   1234567


Q ss_pred             EEccCCCEEEEEEEcCCcceEEEE
Q psy7767         161 WFSPDGSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       161 ~WSPDGk~Laf~r~D~s~v~~~~i  184 (200)
                      ..|||++.|++...-...+..+++
T Consensus        63 als~d~~~vlv~Et~~~Ri~rywl   86 (89)
T PF03088_consen   63 ALSPDESFVLVAETGRYRILRYWL   86 (89)
T ss_dssp             EE-TTSSEEEEEEGGGTEEEEEES
T ss_pred             EEcCCCCEEEEEeccCceEEEEEE
Confidence            899999999988766665655553

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>COG1770 PtrB Protease II [Amino acid transport and metabolism]

Probab=89.29  E-value=1.2  Score=44.29  Aligned_cols=61  Identities=18%  Similarity=0.243  Sum_probs=42.1

Q ss_pred             ceeeEECcCCCEEEEEEc---C---cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          98 LQLVQWSPVGHDLIFVKD---N---NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~---g---dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      +..++.|||++.+||..+   +   .|-+.++.+|...-                    |++-+...++.|.+||+.|.|
T Consensus       131 Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~--------------------d~i~~~~~~~~Wa~d~~~lfY  190 (682)
T COG1770         131 LGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELP--------------------DEITNTSGSFAWAADGKTLFY  190 (682)
T ss_pred             eeeeeeCCCCceEEEEEecccccEEEEEEEecccccccc--------------------hhhcccccceEEecCCCeEEE
Confidence            467899999999999964   2   35555665554321                    111112456799999999999


Q ss_pred             EEEcCCc
Q psy7767         172 MKFNDAR  178 (200)
Q Consensus       172 ~r~D~s~  178 (200)
                      ++.|+..
T Consensus       191 t~~d~~~  197 (682)
T COG1770         191 TRLDENH  197 (682)
T ss_pred             EEEcCCC
Confidence            9988863

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=89.27  E-value=1.3  Score=39.80  Aligned_cols=30  Identities=30%  Similarity=0.372  Sum_probs=20.3

Q ss_pred             CCcceEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767         156 STKTLWFSPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       156 ~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      ..+++.|||||+.|.+.-...+.+..+.+.
T Consensus       164 ~~NGla~SpDg~tly~aDT~~~~i~r~~~d  193 (307)
T COG3386         164 IPNGLAFSPDGKTLYVADTPANRIHRYDLD  193 (307)
T ss_pred             ecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence            567889999999887664444444444444

>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]

Probab=89.14  E-value=1  Score=43.96  Aligned_cols=67  Identities=25%  Similarity=0.399  Sum_probs=43.6

Q ss_pred             CCceeeEECcCCCEEEEEEcC----------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767          96 NFLQLVQWSPVGHDLIFVKDN----------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD  165 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~g----------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD  165 (200)
                      ..+.++..+|+|+.++|+...          .+|+.+...  ...++..                    +....++||||
T Consensus        13 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~--------------------~~~~~~~~spd   70 (620)
T COG1506          13 ARVSDPRVSPPGGRLAYILTGLDFLKPLYKSSLWVSDGKT--VRLLTFG--------------------GGVSELRWSPD   70 (620)
T ss_pred             hcccCcccCCCCceeEEeeccccccccccccceEEEeccc--ccccccC--------------------CcccccccCCC
Confidence            357889999999999999753          455543221  2222221                    24567899999


Q ss_pred             CCEEEEEEEcCCcceEEEE
Q psy7767         166 GSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       166 Gk~Laf~r~D~s~v~~~~i  184 (200)
                      |+.++|...+......+++
T Consensus        71 g~~~~~~~~~~~~~~~l~l   89 (620)
T COG1506          71 GSVLAFVSTDGGRVAQLYL   89 (620)
T ss_pred             CCEEEEEeccCCCcceEEE
Confidence            9999999855444333333

>PTZ00421 coronin; Provisional

Probab=89.13  E-value=2.5  Score=40.37  Aligned_cols=70  Identities=13%  Similarity=0.152  Sum_probs=43.3

Q ss_pred             CCCceeeEECcCCCEEEEE--EcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFV--KDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV--~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|+|++..+..+  .++.|.+.++..+..........                  .....+.|+|||+.|+-.
T Consensus       125 ~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~------------------~~V~sla~spdG~lLatg  186 (493)
T PTZ00421        125 TKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHS------------------DQITSLEWNLDGSLLCTT  186 (493)
T ss_pred             CCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCC------------------CceEEEEEECCCCEEEEe
Confidence            4567889999997544333  35679999998765443222111                  123468899999877654


Q ss_pred             EEcCCcceEEE
Q psy7767         173 KFNDARVHNMS  183 (200)
Q Consensus       173 r~D~s~v~~~~  183 (200)
                       ..++.+.++.
T Consensus       187 -s~Dg~IrIwD  196 (493)
T PTZ00421        187 -SKDKKLNIID  196 (493)
T ss_pred             -cCCCEEEEEE
Confidence             3344454443

>KOG2110|consensus

Probab=89.11  E-value=5  Score=37.49  Aligned_cols=78  Identities=22%  Similarity=0.137  Sum_probs=48.5

Q ss_pred             CCCceeeEECcCCCEEEEEEcC--cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDN--NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~g--dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      .+.+.-+++||||+.||=.++.  =|-|..+.+|+..  .+      +-.|.-        .-+-.+++||||++.|+- 
T Consensus       173 ~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl--~e------FRRG~~--------~~~IySL~Fs~ds~~L~~-  235 (391)
T KOG2110|consen  173 KGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKL--YE------FRRGTY--------PVSIYSLSFSPDSQFLAA-  235 (391)
T ss_pred             CCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEe--ee------eeCCce--------eeEEEEEEECCCCCeEEE-
Confidence            5678999999999999987643  1222233333321  11      011110        013457899999998874 


Q ss_pred             EEcCCcceEEEEEeeCC
Q psy7767         173 KFNDARVHNMSYIHYGE  189 (200)
Q Consensus       173 r~D~s~v~~~~i~~~~~  189 (200)
                      ..+..-|.+|.+.....
T Consensus       236 sS~TeTVHiFKL~~~~~  252 (391)
T KOG2110|consen  236 SSNTETVHIFKLEKVSN  252 (391)
T ss_pred             ecCCCeEEEEEeccccc
Confidence            45566789998877764

>KOG2096|consensus

Probab=88.41  E-value=1.4  Score=40.67  Aligned_cols=61  Identities=16%  Similarity=0.113  Sum_probs=41.0

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      +...--+..||+|+-+|-..+.+|-+...++|+...-..+-             -+    +....++|||||+++|-.
T Consensus       331 g~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~-------------h~----~~Is~is~~~~g~~~atc  391 (420)
T KOG2096|consen  331 GSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDI-------------HS----TTISSISYSSDGKYIATC  391 (420)
T ss_pred             CCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHh-------------hc----CceeeEEecCCCcEEeee
Confidence            33445789999999999999988888766655432111100             00    134678999999999754

>KOG0305|consensus

Probab=88.34  E-value=2  Score=41.35  Aligned_cols=66  Identities=27%  Similarity=0.325  Sum_probs=49.7

Q ss_pred             ceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767          98 LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA  177 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s  177 (200)
                      ..-+.|| ..+.||-..+..||+.+...+.+.+|...++                  .....+.|+|||+.||--.. .+
T Consensus       180 ~nlldWs-s~n~laValg~~vylW~~~s~~v~~l~~~~~------------------~~vtSv~ws~~G~~LavG~~-~g  239 (484)
T KOG0305|consen  180 LNLLDWS-SANVLAVALGQSVYLWSASSGSVTELCSFGE------------------ELVTSVKWSPDGSHLAVGTS-DG  239 (484)
T ss_pred             hhHhhcc-cCCeEEEEecceEEEEecCCCceEEeEecCC------------------CceEEEEECCCCCEEEEeec-CC
Confidence            3556899 6667787788899999999999888887642                  14568899999999986543 35


Q ss_pred             cceEEE
Q psy7767         178 RVHNMS  183 (200)
Q Consensus       178 ~v~~~~  183 (200)
                      .++++.
T Consensus       240 ~v~iwD  245 (484)
T KOG0305|consen  240 TVQIWD  245 (484)
T ss_pred             eEEEEe
Confidence            566554

>KOG0273|consensus

Probab=88.25  E-value=1.2  Score=42.67  Aligned_cols=18  Identities=33%  Similarity=0.512  Sum_probs=14.8

Q ss_pred             cceEEccCCCEEEEEEEc
Q psy7767         158 KTLWFSPDGSILAYMKFN  175 (200)
Q Consensus       158 ~~~~WSPDGk~Laf~r~D  175 (200)
                      .++.|||||++||+=..|
T Consensus       456 ysvafS~~g~ylAsGs~d  473 (524)
T KOG0273|consen  456 YSVAFSPNGRYLASGSLD  473 (524)
T ss_pred             EEEEecCCCcEEEecCCC
Confidence            478999999999986554

>KOG1445|consensus

Probab=88.13  E-value=1.1  Score=44.84  Aligned_cols=66  Identities=20%  Similarity=0.280  Sum_probs=44.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...|.+++|||||+++|-|. ++.|++..-..++. +|-......    |           ++-..+.|.=||+.|..+-
T Consensus       720 tdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~-pv~Eg~gpv----g-----------tRgARi~wacdgr~viv~G  783 (1012)
T KOG1445|consen  720 TDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ-PVYEGKGPV----G-----------TRGARILWACDGRIVIVVG  783 (1012)
T ss_pred             cCceeEEEECCCCcceeeeecCceEEEeCCCCCCC-ccccCCCCc----c-----------CcceeEEEEecCcEEEEec
Confidence            46789999999999999995 77888876543332 233211110    0           2344577999999888776


Q ss_pred             EcC
Q psy7767         174 FND  176 (200)
Q Consensus       174 ~D~  176 (200)
                      +|.
T Consensus       784 fdk  786 (1012)
T KOG1445|consen  784 FDK  786 (1012)
T ss_pred             ccc
Confidence            654

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=88.07  E-value=6.8  Score=35.37  Aligned_cols=73  Identities=14%  Similarity=0.095  Sum_probs=41.9

Q ss_pred             eeEECcCCCEEEEEEcC------------cEEEEECCCCCeE--EEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767         100 LVQWSPVGHDLIFVKDN------------NLYQAYDDFRSIN--ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD  165 (200)
Q Consensus       100 ~~~wSPDGk~IAFV~~g------------dLyv~~~~~g~~~--rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD  165 (200)
                      .+.|++||+.+.|+.-+            +||...+.++...  .|-......               + ....+..|+|
T Consensus       174 ~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~---------------~-~~~~~~~s~d  237 (414)
T PF02897_consen  174 SVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEP---------------F-WFVSVSRSKD  237 (414)
T ss_dssp             EEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCT---------------T-SEEEEEE-TT
T ss_pred             eEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCC---------------c-EEEEEEecCc
Confidence            49999999999999622            3777766554332  222211100               0 1235789999


Q ss_pred             CCEEEEEEEcCCc-ceEEEEEeeC
Q psy7767         166 GSILAYMKFNDAR-VHNMSYIHYG  188 (200)
Q Consensus       166 Gk~Laf~r~D~s~-v~~~~i~~~~  188 (200)
                      |++|......... ...+.++...
T Consensus       238 ~~~l~i~~~~~~~~s~v~~~d~~~  261 (414)
T PF02897_consen  238 GRYLFISSSSGTSESEVYLLDLDD  261 (414)
T ss_dssp             SSEEEEEEESSSSEEEEEEEECCC
T ss_pred             ccEEEEEEEccccCCeEEEEeccc
Confidence            9988766665555 4455555443

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length

Probab=88.06  E-value=3.2  Score=32.85  Aligned_cols=22  Identities=36%  Similarity=0.530  Sum_probs=16.3

Q ss_pred             CCCcceEEccCCCEEEEEEEcC
Q psy7767         155 SSTKTLWFSPDGSILAYMKFND  176 (200)
Q Consensus       155 ~~~~~~~WSPDGk~Laf~r~D~  176 (200)
                      |..-...|||||++|.|.-.|+
T Consensus        68 GGtHvHvfSpDG~~lSFTYNDh   89 (122)
T PF12566_consen   68 GGTHVHVFSPDGSWLSFTYNDH   89 (122)
T ss_pred             CCccceEECCCCCEEEEEecch
Confidence            3344567999999999985544

>KOG0315|consensus

Probab=87.63  E-value=4.9  Score=36.14  Aligned_cols=76  Identities=17%  Similarity=0.076  Sum_probs=48.0

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeE----EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSIN----ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~----rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      .-.++.++..|||+.++=+. .|+.|+.++-++...    .++.-...    +            +....-.+|||+++|
T Consensus       167 ~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah----~------------~~il~C~lSPd~k~l  230 (311)
T KOG0315|consen  167 DTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAH----N------------GHILRCLLSPDVKYL  230 (311)
T ss_pred             CcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecc----c------------ceEEEEEECCCCcEE
Confidence            45679999999999988775 579999987664321    22210000    0            122345799999999


Q ss_pred             EEEEEcCCcceEEEEEee
Q psy7767         170 AYMKFNDARVHNMSYIHY  187 (200)
Q Consensus       170 af~r~D~s~v~~~~i~~~  187 (200)
                      |-...|. .+.++.....
T Consensus       231 at~ssdk-tv~iwn~~~~  247 (311)
T KOG0315|consen  231 ATCSSDK-TVKIWNTDDF  247 (311)
T ss_pred             EeecCCc-eEEEEecCCc
Confidence            8665553 4666554443

>KOG2315|consensus

Probab=87.40  E-value=6.7  Score=38.29  Aligned_cols=75  Identities=19%  Similarity=0.240  Sum_probs=48.2

Q ss_pred             cCCCCCceeeEECcCCCEEEEEEcC---cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          92 LDGSNFLQLVQWSPVGHDLIFVKDN---NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        92 lt~~~~is~~~wSPDGk~IAFV~~g---dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      |...+.+-+..|||+|+..+-|.+-   -+=+-++. +.+.-....|                    -...+.|||-|+.
T Consensus       267 L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~eg--------------------pRN~~~fnp~g~i  325 (566)
T KOG2315|consen  267 LLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFPEG--------------------PRNTAFFNPHGNI  325 (566)
T ss_pred             cCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCCCC--------------------CccceEECCCCCE
Confidence            4446789999999999999888753   23333433 2332222222                    3456789999999


Q ss_pred             EEEEEEcC--CcceEEEEEee
Q psy7767         169 LAYMKFND--ARVHNMSYIHY  187 (200)
Q Consensus       169 Laf~r~D~--s~v~~~~i~~~  187 (200)
                      |++.-+++  +.+..+.+...
T Consensus       326 i~lAGFGNL~G~mEvwDv~n~  346 (566)
T KOG2315|consen  326 ILLAGFGNLPGDMEVWDVPNR  346 (566)
T ss_pred             EEEeecCCCCCceEEEeccch
Confidence            99887665  34555555553

>KOG0266|consensus

Probab=87.34  E-value=3.2  Score=38.78  Aligned_cols=73  Identities=23%  Similarity=0.184  Sum_probs=47.2

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEEC-CCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYD-DFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~-~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+.+.+|||||+.|+=.. +..|.+.++ +.+...+.-. |        ...         ....+.|+|+|+.|+ .
T Consensus       203 ~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~-g--------H~~---------~v~~~~f~p~g~~i~-S  263 (456)
T KOG0266|consen  203 TRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLK-G--------HST---------YVTSVAFSPDGNLLV-S  263 (456)
T ss_pred             ccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEec-C--------CCC---------ceEEEEecCCCCEEE-E
Confidence            46789999999999665554 457888888 3333333332 2        222         234789999995554 5


Q ss_pred             EEcCCcceEEEEEe
Q psy7767         173 KFNDARVHNMSYIH  186 (200)
Q Consensus       173 r~D~s~v~~~~i~~  186 (200)
                      -.+++.+.++.+..
T Consensus       264 gs~D~tvriWd~~~  277 (456)
T KOG0266|consen  264 GSDDGTVRIWDVRT  277 (456)
T ss_pred             ecCCCcEEEEeccC
Confidence            55556687777665

>KOG0279|consensus

Probab=87.24  E-value=7.6  Score=35.23  Aligned_cols=80  Identities=18%  Similarity=0.167  Sum_probs=50.1

Q ss_pred             CCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....+..+.|||+-=+|+-..+..|-+.+++++... -+..++.-.-...+.|          +--.+.||+||..| |.
T Consensus       232 a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~----------~clslaws~dG~tL-f~  300 (315)
T KOG0279|consen  232 AFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDP----------ICLSLAWSADGQTL-FA  300 (315)
T ss_pred             CCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCc----------EEEEEEEcCCCcEE-Ee
Confidence            345678899999999998888888888888876432 2333221000001111          34578999999988 55


Q ss_pred             EEcCCcceEEEE
Q psy7767         173 KFNDARVHNMSY  184 (200)
Q Consensus       173 r~D~s~v~~~~i  184 (200)
                      -.-+..+..+.+
T Consensus       301 g~td~~irv~qv  312 (315)
T KOG0279|consen  301 GYTDNVIRVWQV  312 (315)
T ss_pred             eecCCcEEEEEe
Confidence            444455555554

>KOG2110|consensus

Probab=86.47  E-value=8.6  Score=35.95  Aligned_cols=73  Identities=15%  Similarity=0.032  Sum_probs=48.4

Q ss_pred             CCCceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ..+...++.++++..+||=.   .|+|++.++.+-++....+--+                  +....+.|||||..||-
T Consensus       129 ~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~------------------~~lAalafs~~G~llAT  190 (391)
T KOG2110|consen  129 PKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHK------------------GPLAALAFSPDGTLLAT  190 (391)
T ss_pred             ccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecC------------------CceeEEEECCCCCEEEE
Confidence            34566666777788999974   4789999877544433332110                  23467899999999987


Q ss_pred             EEEcCCcceEEEEE
Q psy7767         172 MKFNDARVHNMSYI  185 (200)
Q Consensus       172 ~r~D~s~v~~~~i~  185 (200)
                      .....+-+++|.++
T Consensus       191 ASeKGTVIRVf~v~  204 (391)
T KOG2110|consen  191 ASEKGTVIRVFSVP  204 (391)
T ss_pred             eccCceEEEEEEcC
Confidence            66655566666653

>KOG0771|consensus

Probab=86.31  E-value=2.6  Score=39.54  Aligned_cols=78  Identities=17%  Similarity=0.081  Sum_probs=51.0

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCC-eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC----EE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRS-INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS----IL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~-~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk----~L  169 (200)
                      ..++.++.|||||+.||++......|.++++|. ..+.|+.+..              |   ....-+||-|+.    +|
T Consensus       186 ~~eV~DL~FS~dgk~lasig~d~~~VW~~~~g~~~a~~t~~~k~--------------~---~~~~cRF~~d~~~~~l~l  248 (398)
T KOG0771|consen  186 HAEVKDLDFSPDGKFLASIGADSARVWSVNTGAALARKTPFSKD--------------E---MFSSCRFSVDNAQETLRL  248 (398)
T ss_pred             cCccccceeCCCCcEEEEecCCceEEEEeccCchhhhcCCcccc--------------h---hhhhceecccCCCceEEE
Confidence            678999999999999999988888888888774 3455532211              1   234567888773    23


Q ss_pred             EEEEEcCCcceEEEEEeeCC
Q psy7767         170 AYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       170 af~r~D~s~v~~~~i~~~~~  189 (200)
                      |-.+.+...+....+.....
T Consensus       249 aa~~~~~~~v~~~~~~~w~~  268 (398)
T KOG0771|consen  249 AASQFPGGGVRLCDISLWSG  268 (398)
T ss_pred             EEecCCCCceeEEEeeeecc
Confidence            33355555666655554443

>KOG1538|consensus

Probab=86.29  E-value=1.4  Score=44.24  Aligned_cols=34  Identities=15%  Similarity=0.229  Sum_probs=29.5

Q ss_pred             CCceeeEECcCCCEEEEEEcCcEEEEECCCCCeE
Q psy7767          96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSIN  129 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~  129 (200)
                      .-+.++++.|||.++....++.|++.+..+|..-
T Consensus        13 hci~d~afkPDGsqL~lAAg~rlliyD~ndG~ll   46 (1081)
T KOG1538|consen   13 HCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLL   46 (1081)
T ss_pred             cchheeEECCCCceEEEecCCEEEEEeCCCcccc
Confidence            4578999999999999999999999998776543

>KOG0273|consensus

Probab=86.28  E-value=2.5  Score=40.59  Aligned_cols=63  Identities=14%  Similarity=0.033  Sum_probs=46.3

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..+++||||+++|+-. ++-|.+.+...++..+=..+..                   ....++|+-+|.+|.-..
T Consensus       452 ~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~-------------------~Ifel~Wn~~G~kl~~~~  512 (524)
T KOG0273|consen  452 QEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTG-------------------GIFELCWNAAGDKLGACA  512 (524)
T ss_pred             CCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCC-------------------eEEEEEEcCCCCEEEEEe
Confidence            45679999999999999984 6778888877777654443321                   123689999999998665


Q ss_pred             EcC
Q psy7767         174 FND  176 (200)
Q Consensus       174 ~D~  176 (200)
                      .|.
T Consensus       513 sd~  515 (524)
T KOG0273|consen  513 SDG  515 (524)
T ss_pred             cCC
Confidence            553

>KOG0305|consensus

Probab=86.21  E-value=10  Score=36.57  Aligned_cols=70  Identities=19%  Similarity=0.209  Sum_probs=45.6

Q ss_pred             eeecCCCCCceeeEECcCCCEEEEEEc---CcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          89 VSDLDGSNFLQLVQWSPVGHDLIFVKD---NNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        89 v~~lt~~~~is~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      +..+-.+..+..+.|||..+.|+...+   ++|-+.....-... -++  |        -.         .+.-.+.|||
T Consensus       381 i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~--g--------H~---------~RVl~la~SP  441 (484)
T KOG0305|consen  381 IDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELL--G--------HT---------SRVLYLALSP  441 (484)
T ss_pred             ecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeec--C--------Cc---------ceeEEEEECC
Confidence            333335788999999999999999875   45555444432111 111  1        10         1344689999


Q ss_pred             CCCEEEEEEEcCC
Q psy7767         165 DGSILAYMKFNDA  177 (200)
Q Consensus       165 DGk~Laf~r~D~s  177 (200)
                      ||++|+-...|++
T Consensus       442 dg~~i~t~a~DET  454 (484)
T KOG0305|consen  442 DGETIVTGAADET  454 (484)
T ss_pred             CCCEEEEecccCc
Confidence            9999988777775

>KOG2314|consensus

Probab=86.20  E-value=6.4  Score=38.83  Aligned_cols=62  Identities=15%  Similarity=0.373  Sum_probs=38.9

Q ss_pred             CCCceeeEECcCCCEEEEEEcCc------EEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNN------LYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gd------Lyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      ...+...+|-|.|++.+-+.++.      +|-.....++...|..-..                  .....+.|||.|+.
T Consensus       445 ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk------------------~~~N~vfwsPkG~f  506 (698)
T KOG2314|consen  445 KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK------------------KFANTVFWSPKGRF  506 (698)
T ss_pred             chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc------------------cccceEEEcCCCcE
Confidence            45678889999999999998763      3433322222222221110                  24567899999999


Q ss_pred             EEEEEE
Q psy7767         169 LAYMKF  174 (200)
Q Consensus       169 Laf~r~  174 (200)
                      ++...-
T Consensus       507 vvva~l  512 (698)
T KOG2314|consen  507 VVVAAL  512 (698)
T ss_pred             EEEEEe
Confidence            876643

>KOG0263|consensus

Probab=86.09  E-value=2.6  Score=42.13  Aligned_cols=71  Identities=21%  Similarity=0.143  Sum_probs=48.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      .+.+..+++||+|++||--. ++.|-++++.+|... ++-.. .                  +...+++||.||..||--
T Consensus       577 ~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~H-t------------------~ti~SlsFS~dg~vLasg  637 (707)
T KOG0263|consen  577 KGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGH-T------------------GTIYSLSFSRDGNVLASG  637 (707)
T ss_pred             CCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcc-c------------------CceeEEEEecCCCEEEec
Confidence            46689999999999999875 567888898876542 11111 0                  234578999999988754


Q ss_pred             EEcCCcceEEEEE
Q psy7767         173 KFNDARVHNMSYI  185 (200)
Q Consensus       173 r~D~s~v~~~~i~  185 (200)
                      ..| ..|..+.+.
T Consensus       638 g~D-nsV~lWD~~  649 (707)
T KOG0263|consen  638 GAD-NSVRLWDLT  649 (707)
T ss_pred             CCC-CeEEEEEch
Confidence            444 446665443

>KOG0973|consensus

Probab=85.83  E-value=2  Score=44.31  Aligned_cols=24  Identities=29%  Similarity=0.369  Sum_probs=19.9

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNL  118 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdL  118 (200)
                      .+.+...+|||||+++|+-.+..+
T Consensus        69 ~~sv~CVR~S~dG~~lAsGSDD~~   92 (942)
T KOG0973|consen   69 DGSVNCVRFSPDGSYLASGSDDRL   92 (942)
T ss_pred             cCceeEEEECCCCCeEeeccCcce
Confidence            356788999999999999987654

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=85.47  E-value=8.1  Score=35.61  Aligned_cols=71  Identities=11%  Similarity=0.030  Sum_probs=37.9

Q ss_pred             cCCCCCceeeEECcCCCEEEEEEc-----------CcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcc
Q psy7767          92 LDGSNFLQLVQWSPVGHDLIFVKD-----------NNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKT  159 (200)
Q Consensus        92 lt~~~~is~~~wSPDGk~IAFV~~-----------gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~  159 (200)
                      +..+...... +||||+.|.-...           +.|=+.|+.+.+.. .|--.+.+. +. .          ......
T Consensus        43 i~~G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~-~~-~----------~~~~~~  109 (352)
T TIGR02658        43 TDGGFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPR-FL-V----------GTYPWM  109 (352)
T ss_pred             EEccCCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCch-hh-c----------cCccce
Confidence            3334444444 9999999754433           24666676665543 222211100 00 0          013446


Q ss_pred             eEEccCCCEEEEEEEc
Q psy7767         160 LWFSPDGSILAYMKFN  175 (200)
Q Consensus       160 ~~WSPDGk~Laf~r~D  175 (200)
                      +..||||++|+..-.+
T Consensus       110 ~~ls~dgk~l~V~n~~  125 (352)
T TIGR02658       110 TSLTPDNKTLLFYQFS  125 (352)
T ss_pred             EEECCCCCEEEEecCC
Confidence            8999999988544333

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG0279|consensus

Probab=85.40  E-value=7.8  Score=35.15  Aligned_cols=83  Identities=17%  Similarity=-0.009  Sum_probs=55.1

Q ss_pred             cceeEEEEEeeeeeeeeeecCCCC-ccceeecCC-CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeEEEeeCCCcc
Q psy7767          62 IALKLSIRCLTWKQSHSLSGRPDT-LTDVSDLDG-SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSINALTRDGIKG  138 (200)
Q Consensus        62 ~~~kv~i~~n~~~~R~s~~a~~~~-~~~v~~lt~-~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~rLT~dg~~~  138 (200)
                      .-..+.|..+.+         .+. ...+++++. +..+++...||||....-. .++-+.+.|+.+|++.|.--....+
T Consensus        37 Dk~ii~W~L~~d---------d~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~d  107 (315)
T KOG0279|consen   37 DKTIIVWKLTSD---------DIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKD  107 (315)
T ss_pred             ceEEEEEEeccC---------ccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCc
Confidence            334556666655         211 345667765 6788999999999984433 3678999999998776555433222


Q ss_pred             eEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767         139 VLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus       139 ~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                                        ..++.+|||.++|+=
T Consensus       108 ------------------Vlsva~s~dn~qivS  122 (315)
T KOG0279|consen  108 ------------------VLSVAFSTDNRQIVS  122 (315)
T ss_pred             ------------------eEEEEecCCCceeec
Confidence                              236789999888753

>KOG0293|consensus

Probab=85.27  E-value=2.7  Score=40.00  Aligned_cols=65  Identities=18%  Similarity=0.298  Sum_probs=38.0

Q ss_pred             CCCceeeEECcCCCEEEEEEcC---cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDN---NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~g---dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ..++=...+||+||++|-....   -+|....+ +..+ |-.+=.      |..         .....+.||||.++|+-
T Consensus       224 tdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d-~~~k-l~~tlv------gh~---------~~V~yi~wSPDdryLla  286 (519)
T KOG0293|consen  224 TDEVWFLQFSHNGKYLASASKDSTAIIWIVVYD-VHFK-LKKTLV------GHS---------QPVSYIMWSPDDRYLLA  286 (519)
T ss_pred             CCcEEEEEEcCCCeeEeeccCCceEEEEEEecC-ccee-eeeeee------ccc---------CceEEEEECCCCCeEEe
Confidence            5678899999999999988643   24444332 3311 111000      000         12346789999999975


Q ss_pred             EEEcC
Q psy7767         172 MKFND  176 (200)
Q Consensus       172 ~r~D~  176 (200)
                      .-.++
T Consensus       287 Cg~~e  291 (519)
T KOG0293|consen  287 CGFDE  291 (519)
T ss_pred             cCchH
Confidence            54443

>PRK13613 lipoprotein LpqB; Provisional

Probab=84.97  E-value=13  Score=36.67  Aligned_cols=80  Identities=9%  Similarity=0.014  Sum_probs=48.7

Q ss_pred             CCCceeeEECcCCCEEEEEEc----CcEEEEECC---CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDD---FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS  167 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~---~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk  167 (200)
                      +..+..+++||||-++|.+.+    +.|++--+.   +|. .+|+.--.  + ..         + ++...++.|..|++
T Consensus       454 g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~-~~l~~~~~--l-~~---------~-l~~v~~~~W~~~~s  519 (599)
T PRK13613        454 GHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAV-VSVEEFRS--L-AP---------E-LEDVTDMSWAGDSQ  519 (599)
T ss_pred             CCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCc-EEeeccEE--e-cc---------C-CCccceeEEcCCCE
Confidence            346999999999999999986    678875433   233 55543100  0 00         1 12456889999986


Q ss_pred             EEEEE-EEcCCcceEEEEEeeCC
Q psy7767         168 ILAYM-KFNDARVHNMSYIHYGE  189 (200)
Q Consensus       168 ~Laf~-r~D~s~v~~~~i~~~~~  189 (200)
                       |+-+ +...+..+.+.+...+.
T Consensus       520 -L~Vlg~~~~~~~~v~~v~vdG~  541 (599)
T PRK13613        520 -LVVLGREEGGVQQARYVQVDGS  541 (599)
T ss_pred             -EEEEeccCCCCcceEEEecCCc
Confidence             5544 44443455555555544

>KOG2394|consensus

Probab=84.70  E-value=5.9  Score=38.81  Aligned_cols=87  Identities=25%  Similarity=0.391  Sum_probs=52.0

Q ss_pred             CCCceeeEECcCCCEEEEE--EcCcEEEEECCC--CC---eEEEeeCCCc-------ceEe-cccccceeeeeeeCCCcc
Q psy7767          95 SNFLQLVQWSPVGHDLIFV--KDNNLYQAYDDF--RS---INALTRDGIK-------GVLF-NGVADWVYEEEVFSSTKT  159 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV--~~gdLyv~~~~~--g~---~~rLT~dg~~-------~~~~-nG~pdwv~eEEi~~~~~~  159 (200)
                      ...+...+|-|.++.+..+  +.|++|+.+.+.  +.   .-+.-.+++.       .... |-+.-|...|.   ...+
T Consensus       219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g---~in~  295 (636)
T KOG2394|consen  219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEG---SINE  295 (636)
T ss_pred             ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccc---cccc
Confidence            4567889999976665444  478999885532  11   1122222211       0011 33445655443   5678


Q ss_pred             eEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767         160 LWFSPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       160 ~~WSPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      +.|||||++||-+..| +..++|.+.
T Consensus       296 f~FS~DG~~LA~VSqD-GfLRvF~fd  320 (636)
T KOG2394|consen  296 FAFSPDGKYLATVSQD-GFLRIFDFD  320 (636)
T ss_pred             eeEcCCCceEEEEecC-ceEEEeecc
Confidence            8999999999988655 566776654

>PTZ00420 coronin; Provisional

Probab=84.47  E-value=40  Score=33.10  Aligned_cols=35  Identities=14%  Similarity=0.101  Sum_probs=28.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSIN  129 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~  129 (200)
                      ...+..++|+|||+.|+-.. ++.|.+.++.++...
T Consensus       167 ~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i  202 (568)
T PTZ00420        167 PKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIA  202 (568)
T ss_pred             CCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEE
Confidence            45688999999999998775 668999999877654

>PTZ00421 coronin; Provisional

Probab=84.23  E-value=7.2  Score=37.27  Aligned_cols=78  Identities=13%  Similarity=0.060  Sum_probs=44.4

Q ss_pred             CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      .+.+..++|+| |++.||-.. ++.|.+.++..+... ..+. .  ...+.|..         .....+.|+|++..++.
T Consensus        75 ~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~-~--l~~L~gH~---------~~V~~l~f~P~~~~iLa  142 (493)
T PTZ00421         75 EGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISD-P--IVHLQGHT---------KKVGIVSFHPSAMNVLA  142 (493)
T ss_pred             CCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCc-c--eEEecCCC---------CcEEEEEeCcCCCCEEE
Confidence            46789999999 888877664 567888887654211 0000 0  00011110         12346789998754444


Q ss_pred             EEEcCCcceEEEE
Q psy7767         172 MKFNDARVHNMSY  184 (200)
Q Consensus       172 ~r~D~s~v~~~~i  184 (200)
                      ....++.+.++.+
T Consensus       143 Sgs~DgtVrIWDl  155 (493)
T PTZ00421        143 SAGADMVVNVWDV  155 (493)
T ss_pred             EEeCCCEEEEEEC
Confidence            5555555655543

>KOG2055|consensus

Probab=83.78  E-value=6  Score=37.99  Aligned_cols=118  Identities=16%  Similarity=0.105  Sum_probs=72.3

Q ss_pred             eeeeeeeeeeeecceEEEEeccCcceeEEEEEeeeeeeeeeecCCCCccceeecCC-CCCceeeEECcCCCEEEEEEcC-
Q psy7767          39 IRCLTWKQSEYWDYNLYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHDLIFVKDN-  116 (200)
Q Consensus        39 ~~~~~~~~~~~~~~~~y~~~~~~~~~kv~i~~n~~~~R~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~IAFV~~g-  116 (200)
                      +||-.-.-..+..+.|=-++=+... .++++.-.+|.--.|--+.-+-..++.+.. ...++.+.++|+|+..+|+.+. 
T Consensus       201 krlkDaNa~~ps~~~I~sv~FHp~~-plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rr  279 (514)
T KOG2055|consen  201 KRLKDANAAHPSHGGITSVQFHPTA-PLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRR  279 (514)
T ss_pred             EeecccccCCcCcCCceEEEecCCC-ceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccc
Confidence            4555556666777777666654443 344444445442233333322234444432 5678999999999988888765 


Q ss_pred             -cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767         117 -NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus       117 -dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                       -+|..++..++..+|..-       +|..     |.   ....+.-||||+.||+.
T Consensus       280 ky~ysyDle~ak~~k~~~~-------~g~e-----~~---~~e~FeVShd~~fia~~  321 (514)
T KOG2055|consen  280 KYLYSYDLETAKVTKLKPP-------YGVE-----EK---SMERFEVSHDSNFIAIA  321 (514)
T ss_pred             eEEEEeeccccccccccCC-------CCcc-----cc---hhheeEecCCCCeEEEc
Confidence             477788887777777653       2331     11   33456779999988764

>KOG0291|consensus

Probab=83.74  E-value=4.6  Score=40.94  Aligned_cols=61  Identities=15%  Similarity=0.159  Sum_probs=45.1

Q ss_pred             ceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767          98 LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA  177 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s  177 (200)
                      ...+.++|||+.|.+-.+|.|.+.++...+...+.-+-..                  ....+.-||||..|  +..|++
T Consensus        17 ~Gnl~ft~dG~sviSPvGNrvsv~dLknN~S~Tl~~e~~~------------------NI~~ialSp~g~ll--lavdE~   76 (893)
T KOG0291|consen   17 AGNLVFTKDGNSVISPVGNRVSVFDLKNNKSYTLPLETRY------------------NITRIALSPDGTLL--LAVDER   76 (893)
T ss_pred             cCcEEECCCCCEEEeccCCEEEEEEccCCcceeEEeecCC------------------ceEEEEeCCCceEE--EEEcCC
Confidence            3568999999999999999999999987776655443321                  34568899999755  445555


Q ss_pred             c
Q psy7767         178 R  178 (200)
Q Consensus       178 ~  178 (200)
                      +
T Consensus        77 g   77 (893)
T KOG0291|consen   77 G   77 (893)
T ss_pred             C
Confidence            3

>KOG1273|consensus

Probab=83.37  E-value=1.8  Score=39.96  Aligned_cols=61  Identities=18%  Similarity=0.118  Sum_probs=41.5

Q ss_pred             CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      .....+|||.|..+|--. +|.|-+.+..+-...++...-.                  .-..+++|||||+.|+-...|
T Consensus        25 ~a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~------------------~pi~sl~WS~dgr~LltsS~D   86 (405)
T KOG1273|consen   25 LAECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHV------------------RPITSLCWSRDGRKLLTSSRD   86 (405)
T ss_pred             ccceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccc------------------cceeEEEecCCCCEeeeecCC
Confidence            377889999999999885 6789888887543322221000                  123578999999988755443

>KOG1007|consensus

Probab=83.35  E-value=3  Score=38.12  Aligned_cols=63  Identities=25%  Similarity=0.241  Sum_probs=43.2

Q ss_pred             CCceeeEECcCCCEEEEEEcCcEEEEECCCCCeE-E-EeeCCCcceEecccccceeeeeeeCCCcceEEcc--CCCEEEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSIN-A-LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP--DGSILAY  171 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~-r-LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP--DGk~Laf  171 (200)
                      +.+....|.||++++|-+.+++|-+.+++.+..+ + |-..+.     ++         +-....+-.|||  ||..++-
T Consensus       124 g~i~cvew~Pns~klasm~dn~i~l~~l~ess~~vaev~ss~s-----~e---------~~~~ftsg~WspHHdgnqv~t  189 (370)
T KOG1007|consen  124 GKINCVEWEPNSDKLASMDDNNIVLWSLDESSKIVAEVLSSES-----AE---------MRHSFTSGAWSPHHDGNQVAT  189 (370)
T ss_pred             CceeeEEEcCCCCeeEEeccCceEEEEcccCcchheeeccccc-----cc---------ccceecccccCCCCccceEEE
Confidence            3678899999999999999999999999876652 1 211111     11         112345567999  8887764


Q ss_pred             E
Q psy7767         172 M  172 (200)
Q Consensus       172 ~  172 (200)
                      .
T Consensus       190 t  190 (370)
T KOG1007|consen  190 T  190 (370)
T ss_pred             e
Confidence            4

>KOG1274|consensus

Probab=83.26  E-value=6.2  Score=40.55  Aligned_cols=77  Identities=17%  Similarity=0.138  Sum_probs=50.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCe-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSI-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      .+.+..+.+.|+|+-||-+. +|.|++.++.++.. ..++.-...+    +   .    +.-.....++|+|||..||+.
T Consensus       138 ~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n----~---~----~~s~i~~~~aW~Pk~g~la~~  206 (933)
T KOG1274|consen  138 DAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDN----E---F----ILSRICTRLAWHPKGGTLAVP  206 (933)
T ss_pred             CCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccc----c---c----cccceeeeeeecCCCCeEEee
Confidence            46688999999999999985 78999999987653 2333211100    0   0    000134568999998888887


Q ss_pred             EEcCCcceEEE
Q psy7767         173 KFNDARVHNMS  183 (200)
Q Consensus       173 r~D~s~v~~~~  183 (200)
                      ..|+ .|..|.
T Consensus       207 ~~d~-~Vkvy~  216 (933)
T KOG1274|consen  207 PVDN-TVKVYS  216 (933)
T ss_pred             ccCC-eEEEEc
Confidence            6654 355444

>KOG2106|consensus

Probab=83.15  E-value=7.2  Score=38.04  Aligned_cols=70  Identities=13%  Similarity=0.207  Sum_probs=43.9

Q ss_pred             CceeeEECcCCCEEEE-EEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          97 FLQLVQWSPVGHDLIF-VKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        97 ~is~~~wSPDGk~IAF-V~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      ....+.+.|.| .||- ...|..++.+.++....++-.+++                   ..+.++|||||..||.-..|
T Consensus       409 ~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d~~-------------------~ls~v~ysp~G~~lAvgs~d  468 (626)
T KOG2106|consen  409 PAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTDNE-------------------QLSVVRYSPDGAFLAVGSHD  468 (626)
T ss_pred             ceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEecCC-------------------ceEEEEEcCCCCEEEEecCC
Confidence            44566677777 3333 345677777777666666665532                   34678999999999865444


Q ss_pred             CCcceEEEEEee
Q psy7767         176 DARVHNMSYIHY  187 (200)
Q Consensus       176 ~s~v~~~~i~~~  187 (200)
                       ..+-+|.+...
T Consensus       469 -~~iyiy~Vs~~  479 (626)
T KOG2106|consen  469 -NHIYIYRVSAN  479 (626)
T ss_pred             -CeEEEEEECCC
Confidence             34555555443

>KOG2055|consensus

Probab=83.01  E-value=5.5  Score=38.23  Aligned_cols=73  Identities=18%  Similarity=0.145  Sum_probs=50.7

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCe-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSI-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      .+.+++..||-||+.|.-+. .|+||+.++..... .+...+|.    .              .-..++-|++|++|| +
T Consensus       344 eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~----v--------------~gts~~~S~ng~ylA-~  404 (514)
T KOG2055|consen  344 EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGS----V--------------HGTSLCISLNGSYLA-T  404 (514)
T ss_pred             ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCc----c--------------ceeeeeecCCCceEE-e
Confidence            56689999999998876553 57999999986543 56677665    1              234678899999776 3


Q ss_pred             EEcCCcceEEEEEe
Q psy7767         173 KFNDARVHNMSYIH  186 (200)
Q Consensus       173 r~D~s~v~~~~i~~  186 (200)
                      -.+.+-|.+|....
T Consensus       405 GS~~GiVNIYd~~s  418 (514)
T KOG2055|consen  405 GSDSGIVNIYDGNS  418 (514)
T ss_pred             ccCcceEEEeccch
Confidence            35555566665333

>KOG1445|consensus

Probab=82.59  E-value=1.9  Score=43.07  Aligned_cols=33  Identities=18%  Similarity=0.376  Sum_probs=24.2

Q ss_pred             CCCCceeeEECc-CCCEEEEEEc-C--cEEEEECCCC
Q psy7767          94 GSNFLQLVQWSP-VGHDLIFVKD-N--NLYQAYDDFR  126 (200)
Q Consensus        94 ~~~~is~~~wSP-DGk~IAFV~~-g--dLyv~~~~~g  126 (200)
                      ++..+.++.|.| |-.++|...+ +  +||-....+.
T Consensus       626 Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl  662 (1012)
T KOG1445|consen  626 NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGL  662 (1012)
T ss_pred             cCceeeecccCCCChHHeeecccCceEEEEEeccCCC
Confidence            466789999999 8899988764 3  5666655544

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=82.57  E-value=3.9  Score=42.18  Aligned_cols=63  Identities=16%  Similarity=0.122  Sum_probs=41.7

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEE----ECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQA----YDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~----~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      +..+..+.+-+|...|.++. +|+|.+.    +.+.....-+..-      -             +.-.+.+||||+..|
T Consensus        75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~v------d-------------~GI~a~~WSPD~Ell  135 (928)
T PF04762_consen   75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSV------D-------------SGILAASWSPDEELL  135 (928)
T ss_pred             CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEE------c-------------CcEEEEEECCCcCEE
Confidence            46678888999988877775 7788888    3332232222210      0             123578999999999


Q ss_pred             EEEEEcC
Q psy7767         170 AYMKFND  176 (200)
Q Consensus       170 af~r~D~  176 (200)
                      |++..+.
T Consensus       136 a~vT~~~  142 (928)
T PF04762_consen  136 ALVTGEG  142 (928)
T ss_pred             EEEeCCC
Confidence            9886543

>KOG0319|consensus

Probab=81.94  E-value=5.3  Score=40.22  Aligned_cols=79  Identities=19%  Similarity=0.180  Sum_probs=51.6

Q ss_pred             ceeecCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767          88 DVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS  167 (200)
Q Consensus        88 ~v~~lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk  167 (200)
                      .++++-.++.   ++||++|+.|+-..++.|-..++.++... +. .+.     ++.         +....++.-+||++
T Consensus        15 s~epiYtGG~---~~~s~nG~~L~t~~~d~Vi~idv~t~~~~-l~-s~~-----~ed---------~d~ita~~l~~d~~   75 (775)
T KOG0319|consen   15 SLEPIYTGGP---VAWSSNGQHLYTACGDRVIIIDVATGSIA-LP-SGS-----NED---------EDEITALALTPDEE   75 (775)
T ss_pred             cccceecCCc---eeECCCCCEEEEecCceEEEEEccCCcee-cc-cCC-----ccc---------hhhhheeeecCCcc
Confidence            4444333333   89999999998888888999998877764 22 221     111         12456788999988


Q ss_pred             EEEEEEEcCCcceEEEEEe
Q psy7767         168 ILAYMKFNDARVHNMSYIH  186 (200)
Q Consensus       168 ~Laf~r~D~s~v~~~~i~~  186 (200)
                      .|. ...+.....++.++.
T Consensus        76 ~L~-~a~rs~llrv~~L~t   93 (775)
T KOG0319|consen   76 VLV-TASRSQLLRVWSLPT   93 (775)
T ss_pred             EEE-EeeccceEEEEEccc
Confidence            775 455556666666553

>KOG1063|consensus

Probab=81.36  E-value=3.3  Score=41.40  Aligned_cols=74  Identities=16%  Similarity=0.037  Sum_probs=42.0

Q ss_pred             CceeeEECcCCCEEEEEEcCcEEEE-ECCCC--CeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKDNNLYQA-YDDFR--SINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~gdLyv~-~~~~g--~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      .+..++|||||+.|+-|.+...+-. +...+  ...+.         .++.+.       -....+-.||||++++| ..
T Consensus       574 TVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~f---------a~~k~H-------tRIIWdcsW~pde~~Fa-Ta  636 (764)
T KOG1063|consen  574 TVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRF---------ACLKAH-------TRIIWDCSWSPDEKYFA-TA  636 (764)
T ss_pred             EEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhh---------cccccc-------ceEEEEcccCcccceeE-Ee
Confidence            4688999999999999976643322 11111  11110         111110       00113446999999865 45


Q ss_pred             EcCCcceEEEEEee
Q psy7767         174 FNDARVHNMSYIHY  187 (200)
Q Consensus       174 ~D~s~v~~~~i~~~  187 (200)
                      .++..|..+..+..
T Consensus       637 SRDK~VkVW~~~~~  650 (764)
T KOG1063|consen  637 SRDKKVKVWEEPDL  650 (764)
T ss_pred             cCCceEEEEeccCc
Confidence            66667877776655

>KOG2106|consensus

Probab=81.33  E-value=10  Score=36.98  Aligned_cols=31  Identities=29%  Similarity=0.373  Sum_probs=24.7

Q ss_pred             CCCCceeeEECcCCCEEEEEE-cCcEEEEECC
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDD  124 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~  124 (200)
                      ++..++-.++||||..+|.-. ++.||+.-++
T Consensus       446 d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs  477 (626)
T KOG2106|consen  446 DNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVS  477 (626)
T ss_pred             cCCceEEEEEcCCCCEEEEecCCCeEEEEEEC
Confidence            467889999999999999986 5567776544

>KOG0268|consensus

Probab=81.05  E-value=5.5  Score=37.34  Aligned_cols=112  Identities=14%  Similarity=0.097  Sum_probs=63.4

Q ss_pred             EEEEeccCcceeEEEEEeeeeeeeeeecCCCCc---------cceeecC-------C-CCCceeeEECcCCCEEEEEE-c
Q psy7767          54 LYLQRSTDIALKLSIRCLTWKQSHSLSGRPDTL---------TDVSDLD-------G-SNFLQLVQWSPVGHDLIFVK-D  115 (200)
Q Consensus        54 ~y~~~~~~~~~kv~i~~n~~~~R~s~~a~~~~~---------~~v~~lt-------~-~~~is~~~wSPDGk~IAFV~-~  115 (200)
                      ||-+|.+.-.+||.+...+.+-.+.-.|..|+.         .+++.|.       + ...+.+..+||.|+.++-.+ +
T Consensus       214 LyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyD  293 (433)
T KOG0268|consen  214 LYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYD  293 (433)
T ss_pred             EEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhcccccc
Confidence            566777777777777666655433332222211         1333332       1 34567888888888844331 2


Q ss_pred             CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEE
Q psy7767         116 NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMS  183 (200)
Q Consensus       116 gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~  183 (200)
                      ..|-+..+..+..+-+-.+..                 +.+...+-||-|+++| +.-.|+.++..+.
T Consensus       294 ksIRIf~~~~~~SRdiYhtkR-----------------Mq~V~~Vk~S~Dskyi-~SGSdd~nvRlWk  343 (433)
T KOG0268|consen  294 KSIRIFPVNHGHSRDIYHTKR-----------------MQHVFCVKYSMDSKYI-ISGSDDGNVRLWK  343 (433)
T ss_pred             ceEEEeecCCCcchhhhhHhh-----------------hheeeEEEEeccccEE-EecCCCcceeeee
Confidence            244444445444443332221                 1345578899999877 5677888888765

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=80.21  E-value=11  Score=33.96  Aligned_cols=26  Identities=23%  Similarity=0.273  Sum_probs=20.0

Q ss_pred             eeeEECcCCCEEEEEE--cCcEEEEECC
Q psy7767          99 QLVQWSPVGHDLIFVK--DNNLYQAYDD  124 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~--~gdLyv~~~~  124 (200)
                      -.++|||||+.+.|+-  .+.|+..+.+
T Consensus       166 NGla~SpDg~tly~aDT~~~~i~r~~~d  193 (307)
T COG3386         166 NGLAFSPDGKTLYVADTPANRIHRYDLD  193 (307)
T ss_pred             CceEECCCCCEEEEEeCCCCeEEEEecC
Confidence            5679999999776663  3678888776

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	200
1orv_A	728	Crystal Structure Of Porcine Dipeptidyl Peptidase I		1e-18
2qt9_A	766	Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A		1e-17
4a5s_A	740	Crystal Structure Of Human Dpp4 In Complex With A N		1e-17
1pfq_A	731	Crystal Structure Of Human Apo Dipeptidyl Peptidase		1e-17
1x70_A	728	Human Dipeptidyl Peptidase Iv In Complex With A Bet		1e-17
1r9n_A	739	Crystal Structure Of Human Dipeptidyl Peptidase Iv		1e-17
1n1m_A	728	Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A		1e-17
2rgu_A	734	Crystal Structure Of Complex Of Human Dpp4 And Inhi		1e-17
3q8w_A	732	A B-Aminoacyl Containing Thiazolidine Derivative An		1e-17
2g5p_A	726	Crystal Structure Of Human Dipeptidyl Peptidase Iv		1e-17
1u8e_A	728	Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F Leng		1e-17
1r9m_A	733	Crystal Structure Of Human Dipeptidyl Peptidase Iv		1e-17
2rip_A	729	Structure Of Dppiv In Complex With An Inhibitor Len		1e-17
1j2e_A	740	Crystal Structure Of Human Dipeptidyl Peptidase Iv		1e-17
3ccb_A	740	Crystal Structure Of Human Dpp4 In Complex With A B		1e-17
2qjr_A	748	Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf		1e-17
2jid_A	736	Human Dipeptidyl Peptidase Iv In Complex With 1-(3,		1e-17
2onc_A	731	Crystal Structure Of Human Dpp-4 Length = 731		1e-17
2bgr_A	738	Crystal Structure Of Hiv-1 Tat Derived Nonapeptides		1e-17
3nox_A	753	Crystal Structure Of Human Dpp-Iv In Complex With S		1e-17
3qbj_A	748	Crystal Structure Of Dipeptidyl Peptidase Iv In Com		2e-17
1z68_A	719	Crystal Structure Of Human Fibroblast Activation Pr		2e-16
1xfd_A	723	Structure Of A Human A-Type Potassium Channel Accel		4e-16
2gbc_A	730	Native Dpp-Iv (Cd26) From Rat Length = 730		4e-16

>pdb|1ORV|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv (Cd26) Length = 728

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 60/94 (63%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q + WSPVGH L +V +N++Y   +   S   +T  G + V++NGV DWVYEEEVFS
Sbjct: 112 NNTQWITWSPVGHKLAYVWNNDIYVKNEPNLSSQRITWTGKENVIYNGVTDWVYEEEVFS 171
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205

>pdb|2QT9|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl Cyclohexylalanine Inhibitor Length = 766

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 150 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 209
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 210 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 243

>pdb|4A5S|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Noval Heterocyclic Dpp4 Inhibitor Length = 740

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 112 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205

>pdb|1PFQ|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv / Cd26 Length = 731

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 115 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 174
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 175 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 208

>pdb|1X70|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With A Beta Amino Acid Inhibitor Length = 728

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 112 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205

>pdb|1R9N|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution Length = 739

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 123 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 182
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 183 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 216

>pdb|1N1M|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH AN INHIBITOR Length = 728

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 112 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205

>pdb|2RGU|A Chain A, Crystal Structure Of Complex Of Human Dpp4 And Inhibitor Length = 734

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 112 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205

>pdb|3Q8W|A Chain A, A B-Aminoacyl Containing Thiazolidine Derivative And Dppiv Complex Length = 732

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 112 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205

>pdb|2G5P|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (Dppiv) Complexed With Cyanopyrrolidine (C5-Pro-Pro) Inhibitor 21ac Length = 726

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 112 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205

>pdb|1U8E|A Chain A, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F Length = 728

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 112 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205

>pdb|1R9M|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv At 2.1 Ang. Resolution. Length = 733

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 117 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 176
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 177 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 210

>pdb|2RIP|A Chain A, Structure Of Dppiv In Complex With An Inhibitor Length = 729

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 113 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 172
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 173 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 206

>pdb|1J2E|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv Length = 740

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 118 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 177
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 178 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 211

>pdb|3CCB|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Benzimidazole Derivative Length = 740

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 124 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 183
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 184 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 217

>pdb|2QJR|A Chain A, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf Length = 748

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 120 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 179
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 180 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 213

>pdb|2JID|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4- Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine Length = 736

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 120 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 179
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 180 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 213

>pdb|2ONC|A Chain A, Crystal Structure Of Human Dpp-4 Length = 731

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 115 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 174
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 175 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 208

>pdb|2BGR|A Chain A, Crystal Structure Of Hiv-1 Tat Derived Nonapeptides Tat(1-9) Bound To The Active Site Of Dipeptidyl Peptidase Iv (Cd26) Length = 738

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 122 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 181
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 182 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 215

>pdb|3NOX|A Chain A, Crystal Structure Of Human Dpp-Iv In Complex With Sa-(+)-(6- (Aminomethyl)-5-(2,4-Dichlorophenyl)-7-Methylimidazo[1, 2-A]pyrimidin- 2-Yl)(Morpholino)methanone Length = 753

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS
Sbjct: 114 NNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 173
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 174 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 207

>pdb|3QBJ|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex With Inhibitor Length = 748

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 58/91 (63%)
Query: 99  QLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTK 158
           Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEEVFS+  
Sbjct: 123 QWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 182
Query: 159 TLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
            LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 183 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 213

>pdb|1Z68|A Chain A, Crystal Structure Of Human Fibroblast Activation Protein Alpha Length = 719

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 57/92 (61%)
Query: 98  LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSST 157
           +Q + WSPVG  L +V  NN+Y           +T +G +  +FNG+ DWVYEEE+ ++ 
Sbjct: 112 IQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171
Query: 158 KTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
             LW+SP+G  LAY +FND  +  ++Y +YG+
Sbjct: 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGD 203

>pdb|1XFD|A Chain A, Structure Of A Human A-Type Potassium Channel Accelerating Factor Dppx, A Member Of The Dipeptidyl Aminopeptidase Family Length = 723

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 81  GRPDTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVL 140
           G P +L D  ++  +  LQ   W P G  LIF+ +NN+Y      +    +   G +GV+
Sbjct: 101 GDPQSL-DPPEVSNAK-LQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVI 158
Query: 141 FNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE---PGSKTYLY 197
           +NG++DW+YEEE+  +    W+SPDG+ LAY   ND+RV  M    Y     P  K Y Y
Sbjct: 159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY 218
Query: 198 P 198
           P
Sbjct: 219 P 219

>pdb|2GBC|A Chain A, Native Dpp-Iv (Cd26) From Rat Length = 730

Iteration: 1
 Score = 80.9 bits (198), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 56/94 (59%)
Query: 96  NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFS 155
           N  Q + WS  GH L +V  N++Y   +     + +T  G + V+FNG+ DWVYEEE+F 
Sbjct: 111 NNTQWITWSQEGHKLAYVWKNDIYVKIEPHLPSHRITSTGKENVIFNGINDWVYEEEIFG 170
Query: 156 STKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE 189
           +   LW+SP+G+ LAY +FND  V  + Y  Y +
Sbjct: 171 AYSALWWSPNGTFLAYAQFNDTGVPLIEYSFYSD 204

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	200
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	4e-31
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	6e-31
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	9e-30
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	5e-27
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	4e-24

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} Length = 719

 Score =  118 bits (296), Expect = 4e-31
 Identities = 40/109 (36%), Positives = 62/109 (56%), Gaps = 3/109 (2%)

Query: 93  DGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEE 152
           +    +Q + WSPVG  L +V  NN+Y           +T +G +  +FNG+ DWVYEEE
Sbjct: 107 ELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEE 166

Query: 153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE---PGSKTYLYP 198
           + ++   LW+SP+G  LAY +FND  +  ++Y +YG+   P +    YP
Sbjct: 167 MLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 Length = 723

 Score =  117 bits (295), Expect = 6e-31
 Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 3/109 (2%)

Query: 93  DGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEE 152
             +  LQ   W P G  LIF+ +NN+Y      +    +   G +GV++NG++DW+YEEE
Sbjct: 111 VSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170

Query: 153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE---PGSKTYLYP 198
           +  +    W+SPDG+ LAY   ND+RV  M    Y     P  K Y YP
Sbjct: 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... Length = 740

 Score =  114 bits (286), Expect = 9e-30
 Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 5/111 (4%)

Query: 93  DGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEE 152
              N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEE
Sbjct: 109 RIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168

Query: 153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGS-----KTYLYP 198
           VFS+   LW+SP+G+ LAY +FND  V  + Y  Y +            YP
Sbjct: 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYP 219

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} Length = 741

 Score =  106 bits (266), Expect = 5e-27
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 4/108 (3%)

Query: 93  DGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEE 152
            G  F    + SP G  + F++  NL+           LT DG   +  NG+A++V +EE
Sbjct: 149 HGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTTI-GNGIAEFVADEE 207

Query: 153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSK--TYLYP 198
                   W++PD S +AY + +++ V            +      YP
Sbjct: 208 -MDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* Length = 706

 Score = 97.8 bits (244), Expect = 4e-24
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%)

Query: 93  DGSNFLQLVQWSPVGHDLIFVKDNNLY-----QAYDDFRSINALTRDGIKGVLFNGVADW 147
           D +     + +SPVG  + +V+++NLY     +  +      A+T DG + +++      
Sbjct: 118 DTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYG---QA 174

Query: 148 VYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE--PGSKTYLYP 198
           V++ E F   K  ++SP GS LA+ + + + V     + Y      SK   YP
Sbjct: 175 VHQRE-FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYP 226

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	200
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.79
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.63
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.53
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.19
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.18
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.64
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.58
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	98.55
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.54
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	98.53
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	98.5
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	98.4
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	98.38
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	98.38
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	98.34
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.34
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	98.32
1k32_A	1045	Tricorn protease; protein degradation, substrate g	98.3
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	98.29
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	98.28
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	98.18
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	98.17
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	98.15
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	98.13
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	98.13
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	98.09
1k32_A	1045	Tricorn protease; protein degradation, substrate g	98.02
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.97
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	97.91
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	97.9
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	97.88
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	97.73
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	97.62
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	97.6
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	97.55
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	97.5
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.5
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	97.5
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	97.44
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	97.43
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	97.4
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	97.38
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	97.33
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	97.32
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	97.23
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	97.21
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	97.2
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	97.2
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	97.2
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	97.18
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	97.17
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	97.13
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	97.1
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	97.07
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	96.98
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	96.9
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	96.85
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.84
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	96.81
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	96.79
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	96.78
3ow8_A	321	WD repeat-containing protein 61; structural genomi	96.72
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	96.71
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	96.71
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	96.68
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	96.68
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	96.67
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	96.67
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	96.63
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	96.62
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	96.61
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	96.58
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	96.56
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	96.53
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	96.52
3ow8_A	321	WD repeat-containing protein 61; structural genomi	96.47
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	96.45
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	96.43
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	96.41
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	96.38
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	96.36
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	96.34
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	96.33
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	96.24
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	96.23
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	96.23
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.22
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	96.17
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	96.07
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	96.02
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	96.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	95.97
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	95.96
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	95.94
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	95.91
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	95.9
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	95.85
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	95.83
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	95.82
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	95.8
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	95.8
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	95.77
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	95.72
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	95.72
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	95.72
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	95.71
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	95.69
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	95.6
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	95.58
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	95.53
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	95.51
3jrp_A	379	Fusion protein of protein transport protein SEC13	95.47
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	95.46
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	95.45
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	95.43
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	95.43
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	95.4
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	95.39
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	95.38
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	95.37
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	95.34
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	95.33
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	95.33
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	95.33
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	95.32
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	95.32
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	95.27
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	95.15
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	95.14
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	95.07
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	95.02
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	95.0
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	94.95
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	94.89
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	94.81
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	94.76
3jrp_A	379	Fusion protein of protein transport protein SEC13	94.65
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	94.61
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	94.6
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	94.6
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	94.54
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	94.53
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	94.53
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	94.44
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	94.29
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	94.29
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	94.28
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	94.22
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	94.18
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	94.16
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	94.14
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	94.1
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	94.1
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	93.99
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	93.88
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	93.74
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	93.72
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	93.6
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	93.58
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	93.58
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	93.41
2pm7_B	297	Protein transport protein SEC13, protein transport	93.28
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	93.23
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	93.16
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	93.14
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	93.14
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	93.08
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	93.05
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	92.93
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	92.88
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	92.83
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	92.82
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	92.71
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	92.6
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	92.44
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	92.39
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	92.39
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	92.05
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	91.89
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	91.78
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	91.65
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	91.53
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	91.47
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	91.39
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	91.31
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	91.24
2pm7_B	297	Protein transport protein SEC13, protein transport	91.17
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	91.16
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	90.79
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	90.02
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	90.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	89.63
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	89.35
3jro_A	753	Fusion protein of protein transport protein SEC13	88.92
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	88.51
2ece_A	462	462AA long hypothetical selenium-binding protein;	88.22
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	88.18
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	88.05
2p4o_A	306	Hypothetical protein; putative lactonase, structur	87.84
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	87.83
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	87.2
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	86.9
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	86.9
3v65_B	386	Low-density lipoprotein receptor-related protein;	86.79
3jro_A	753	Fusion protein of protein transport protein SEC13	86.75
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	86.64
2qe8_A	343	Uncharacterized protein; structural genomics, join	85.12
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	85.04
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	84.99
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	83.57
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	82.82
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	82.72
2ece_A	462	462AA long hypothetical selenium-binding protein;	82.48
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	82.34
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	81.73
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	81.32
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	81.04
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	80.28

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.79  E-value=2.3e-19  Score=169.29  Aligned_cols=134  Identities=35%  Similarity=0.636  Sum_probs=112.1

Q ss_pred             EEEeccCcceeEEEEEeeeee-eeeeecCCCCc----cceeecCC-CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCe
Q psy7767          55 YLQRSTDIALKLSIRCLTWKQ-SHSLSGRPDTL----TDVSDLDG-SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSI  128 (200)
Q Consensus        55 y~~~~~~~~~kv~i~~n~~~~-R~s~~a~~~~~----~~v~~lt~-~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~  128 (200)
                      |...+.+  ++|++..+..+. ||++.++.+..    .++++++. ...+..++|||||++|||+.+++||+.++++|+.
T Consensus        67 ~~~Spdg--~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~  144 (740)
T 4a5s_A           67 YSISPDG--QFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPS  144 (740)
T ss_dssp             EEECTTS--SEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCC
T ss_pred             eEECCCC--CEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCce
Confidence            4444433  467888776666 88888777521    23444554 4567999999999999999999999999999999


Q ss_pred             EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeCCC
Q psy7767         129 NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEP  190 (200)
Q Consensus       129 ~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~~  190 (200)
                      +|||.+|....+++|.++|+|+||||+...+++|||||++|||.+.|++.++.+.++.+...
T Consensus       145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~  206 (740)
T 4a5s_A          145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE  206 (740)
T ss_dssp             EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCST
T ss_pred             EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCC
Confidence            99999988777899999999999999999999999999999999999999999999988763

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.63  E-value=8.6e-16  Score=142.35  Aligned_cols=94  Identities=39%  Similarity=0.790  Sum_probs=86.0

Q ss_pred             CCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      ..+..++|||||++|||+.+++||+.++++++..++|.++....+++|.++|+++||+++...+++|||||++|||.+.|
T Consensus       110 ~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d  189 (719)
T 1z68_A          110 RPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN  189 (719)
T ss_dssp             SSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred             cccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence            46789999999999999999999999999999999998887776789999999999988888999999999999999999


Q ss_pred             CCcceEEEEEeeCC
Q psy7767         176 DARVHNMSYIHYGE  189 (200)
Q Consensus       176 ~s~v~~~~i~~~~~  189 (200)
                      ++.++.+.++.+..
T Consensus       190 ~~~~~~~~~~~~~~  203 (719)
T 1z68_A          190 DTDIPVIAYSYYGD  203 (719)
T ss_dssp             CTTSCEEEEEECCS
T ss_pred             CCCCceEEeeccCC
Confidence            88889888877765

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.53  E-value=2.6e-14  Score=131.62  Aligned_cols=91  Identities=40%  Similarity=0.781  Sum_probs=81.9

Q ss_pred             ceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767          98 LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA  177 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s  177 (200)
                      +..++|||||++|||+.+++||+.++++++..+++..+...++++|.++|+++||+++...+++|||||++|+|.+.+.+
T Consensus       116 ~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~  195 (723)
T 1xfd_A          116 LQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDS  195 (723)
T ss_dssp             CSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECT
T ss_pred             ccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCC
Confidence            78899999999999999999999999999999999887666678999999999999888899999999999999999888


Q ss_pred             cceEEEEEeeC
Q psy7767         178 RVHNMSYIHYG  188 (200)
Q Consensus       178 ~v~~~~i~~~~  188 (200)
                      .+..+.++.+.
T Consensus       196 ~~~~~~~~~~~  206 (723)
T 1xfd_A          196 RVPIMELPTYT  206 (723)
T ss_dssp             TSCEEEECCCS
T ss_pred             ccceEEeeccC
Confidence            88777765443

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.19  E-value=6.2e-11  Score=109.28  Aligned_cols=91  Identities=31%  Similarity=0.502  Sum_probs=77.5

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCC-----CCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDF-----RSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~-----g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ...+..++|||||+.|||+.+++||+.++++     ++..+++..+... +.+|.+  +++|| ++...+++|||||++|
T Consensus       120 ~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~--~~~ee-~~~~~~~~~SpDg~~l  195 (706)
T 2z3z_A          120 NEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTET-LVYGQA--VHQRE-FGIEKGTFWSPKGSCL  195 (706)
T ss_dssp             TTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTT-EEESSC--CGGGC-TTCCCSEEECTTSSEE
T ss_pred             cccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCC-eEcccc--hhhhh-cCCCceEEECCCCCEE
Confidence            3567889999999999999999999999998     8899999877554 578888  88888 5788999999999999


Q ss_pred             EEEEEcCCcceEEEEEeeCC
Q psy7767         170 AYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       170 af~r~D~s~v~~~~i~~~~~  189 (200)
                      +|.+.|++.++.+.+..+..
T Consensus       196 a~~~~d~~~~~~~~~~~~~~  215 (706)
T 2z3z_A          196 AFYRMDQSMVKPTPIVDYHP  215 (706)
T ss_dssp             EEEEEECTTSCCEEEEECCS
T ss_pred             EEEEECCCCCceEEeeccCC
Confidence            99998888887777665543

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.18  E-value=6e-11  Score=109.78  Aligned_cols=90  Identities=28%  Similarity=0.455  Sum_probs=75.7

Q ss_pred             eecCC-CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          90 SDLDG-SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        90 ~~lt~-~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      +.++. ...+..++|||||++|||+.+++||+.++++++..+++..+... +.+|.++|+++|| ++...+++|||||++
T Consensus       145 ~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~g~~~~v~~~~-~~~~~~~~~SpDg~~  222 (741)
T 2ecf_A          145 RQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTT-IGNGIAEFVADEE-MDRHTGYWWAPDDSA  222 (741)
T ss_dssp             CBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSS-EEESCCCHHHHHH-SCCCCSEEECTTSSC
T ss_pred             EEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccc-eeccccceeeeec-cccccceEECCCCCE
Confidence            34443 35678999999999999999999999999999999999876544 5889999999988 677889999999999


Q ss_pred             EEEEEEcCCcceE
Q psy7767         169 LAYMKFNDARVHN  181 (200)
Q Consensus       169 Laf~r~D~s~v~~  181 (200)
                      |+|...|.+.+..
T Consensus       223 l~~~~~d~~~~~~  235 (741)
T 2ecf_A          223 IAYARIDESPVPV  235 (741)
T ss_dssp             EEEEEEECTTSCE
T ss_pred             EEEEEEcCCCCce
Confidence            9999888765443

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.64  E-value=3.1e-07  Score=76.47  Aligned_cols=60  Identities=18%  Similarity=0.268  Sum_probs=48.8

Q ss_pred             CCceeeEECcCCCEEEEEEcC------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVKDN------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~g------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ..+..++|||||++|||+...      +||+.++++++..+++..+.                    ...+.|||||++|
T Consensus        59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--------------------~~~~~wspdg~~l  118 (347)
T 2gop_A           59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN--------------------IRSLEWNEDSRKL  118 (347)
T ss_dssp             ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE--------------------EEEEEECTTSSEE
T ss_pred             ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC--------------------ccceeECCCCCEE
Confidence            356789999999999999742      49999999988888886431                    2367999999999


Q ss_pred             EEEEEc
Q psy7767         170 AYMKFN  175 (200)
Q Consensus       170 af~r~D  175 (200)
                      +|...+
T Consensus       119 ~~~~~~  124 (347)
T 2gop_A          119 LIVGFK  124 (347)
T ss_dssp             EEEEEC
T ss_pred             EEEEcc
Confidence            999764

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.58  E-value=2.6e-07  Score=77.59  Aligned_cols=61  Identities=21%  Similarity=0.185  Sum_probs=48.8

Q ss_pred             ceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          98 LQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      +..++|||||++|+|+...    +||+.++++++..+++.....                  ....+.|||||++|+|++
T Consensus        38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~------------------~~~~~~~spdg~~l~~~~   99 (396)
T 3c5m_A           38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGD------------------NTFGGFISTDERAFFYVK   99 (396)
T ss_dssp             TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCB------------------CTTTCEECTTSSEEEEEE
T ss_pred             eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCC------------------ccccceECCCCCEEEEEE
Confidence            6789999999999999754    799999999988888764321                  123478999999999987


Q ss_pred             EcC
Q psy7767         174 FND  176 (200)
Q Consensus       174 ~D~  176 (200)
                      .+.
T Consensus       100 ~~~  102 (396)
T 3c5m_A          100 NEL  102 (396)
T ss_dssp             TTT
T ss_pred             cCC
Confidence            654

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=98.55  E-value=7.6e-07  Score=78.44  Aligned_cols=73  Identities=22%  Similarity=0.196  Sum_probs=56.5

Q ss_pred             CCCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ...+..++|||||++|||+...    .|++.++++++..+++....                   ....+.|||||++|+
T Consensus       178 ~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~-------------------~~~~~~~spdg~~la  238 (415)
T 2hqs_A          178 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR-------------------HNGAPAFSPDGSKLA  238 (415)
T ss_dssp             SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS-------------------CEEEEEECTTSSEEE
T ss_pred             CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCC-------------------cccCEEEcCCCCEEE
Confidence            4568999999999999999753    89999999988887775332                   234789999999999


Q ss_pred             EEEEcCCcceEEEEEe
Q psy7767         171 YMKFNDARVHNMSYIH  186 (200)
Q Consensus       171 f~r~D~s~v~~~~i~~  186 (200)
                      |....++...++.+..
T Consensus       239 ~~~~~~g~~~i~~~d~  254 (415)
T 2hqs_A          239 FALSKTGSLNLYVMDL  254 (415)
T ss_dssp             EEECTTSSCEEEEEET
T ss_pred             EEEecCCCceEEEEEC
Confidence            9876655555555444

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.54  E-value=2.1e-07  Score=78.50  Aligned_cols=71  Identities=23%  Similarity=0.236  Sum_probs=52.5

Q ss_pred             cceeecCCCC-C-----ceeeEECcCCCEEEEEEc--C--cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCC
Q psy7767          87 TDVSDLDGSN-F-----LQLVQWSPVGHDLIFVKD--N--NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSS  156 (200)
Q Consensus        87 ~~v~~lt~~~-~-----is~~~wSPDGk~IAFV~~--g--dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~  156 (200)
                      ..+++++... .     +..++|||||++|+|+..  +  +||+.++++++.+++|.....                  .
T Consensus        21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~------------------~   82 (388)
T 3pe7_A           21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD------------------N   82 (388)
T ss_dssp             CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB------------------C
T ss_pred             cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC------------------C
Confidence            3555665422 2     234899999999999986  2  599999999999999874321                  1


Q ss_pred             CcceEEccCCCEEEEEEEc
Q psy7767         157 TKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus       157 ~~~~~WSPDGk~Laf~r~D  175 (200)
                      ..++.|||||++|+|...+
T Consensus        83 ~~~~~~spdg~~l~~~~~~  101 (388)
T 3pe7_A           83 TFGGFLSPDDDALFYVKDG  101 (388)
T ss_dssp             SSSCEECTTSSEEEEEETT
T ss_pred             ccceEEcCCCCEEEEEeCC
Confidence            2256899999999998744

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=98.53  E-value=1.3e-06  Score=76.91  Aligned_cols=75  Identities=21%  Similarity=0.177  Sum_probs=57.3

Q ss_pred             CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ...+..++|||||+.|+|+..    .+||+.++++++..+++....                   ....+.|||||++|+
T Consensus       222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~-------------------~~~~~~~spdg~~l~  282 (415)
T 2hqs_A          222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS-------------------NNTEPTWFPDSQNLA  282 (415)
T ss_dssp             SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS-------------------CEEEEEECTTSSEEE
T ss_pred             CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC-------------------cccceEECCCCCEEE
Confidence            345789999999999999973    359999999888887775432                   234689999999999


Q ss_pred             EEEEcCCcceEEEEEeeC
Q psy7767         171 YMKFNDARVHNMSYIHYG  188 (200)
Q Consensus       171 f~r~D~s~v~~~~i~~~~  188 (200)
                      |...+++...++.+...+
T Consensus       283 ~~s~~~g~~~i~~~d~~~  300 (415)
T 2hqs_A          283 FTSDQAGRPQVYKVNING  300 (415)
T ss_dssp             EEECTTSSCEEEEEETTS
T ss_pred             EEECCCCCcEEEEEECCC
Confidence            988666555666555443

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=98.50  E-value=6e-07  Score=84.00  Aligned_cols=62  Identities=11%  Similarity=0.052  Sum_probs=49.4

Q ss_pred             CceeeEECcCCCEEEEEEc--C----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD--N----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~--g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      .+..++|||||++|||..+  |    +||+.++++|+..+++..+.                   ...++.|||||+.|+
T Consensus       126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-------------------~~~~~~wspDg~~l~  186 (710)
T 2xdw_A          126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-------------------KFSCMAWTHDGKGMF  186 (710)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-------------------CSCCEEECTTSSEEE
T ss_pred             EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-------------------ccceEEEEeCCCEEE
Confidence            3678999999999999964  2    79999999998877654221                   235689999999999


Q ss_pred             EEEEcCC
Q psy7767         171 YMKFNDA  177 (200)
Q Consensus       171 f~r~D~s  177 (200)
                      |.+.+..
T Consensus       187 ~~~~~~~  193 (710)
T 2xdw_A          187 YNAYPQQ  193 (710)
T ss_dssp             EEECCCC
T ss_pred             EEEECCc
Confidence            9987754

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=98.40  E-value=7e-07  Score=80.81  Aligned_cols=67  Identities=9%  Similarity=-0.118  Sum_probs=50.4

Q ss_pred             eeeEECcCCCEEEEEEc-----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          99 QLVQWSPVGHDLIFVKD-----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~~-----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ..++|||||+.|||+..     +.||+.++++++.++|+....                   ...++.|||||++|+ ..
T Consensus       153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~-------------------~~~~~~~SpDG~~l~-~~  212 (582)
T 3o4h_A          153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG-------------------SFSSASISPGMKVTA-GL  212 (582)
T ss_dssp             CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC-------------------EEEEEEECTTSCEEE-EE
T ss_pred             ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC-------------------ccccceECCCCCEEE-Ec
Confidence            78999999999999863     479999999999888876432                   235789999999998 44


Q ss_pred             EcCCcceEEEEE
Q psy7767         174 FNDARVHNMSYI  185 (200)
Q Consensus       174 ~D~s~v~~~~i~  185 (200)
                      .+++...++.+.
T Consensus       213 ~~~~~~~i~~~d  224 (582)
T 3o4h_A          213 ETAREARLVTVD  224 (582)
T ss_dssp             ECSSCEEEEEEC
T ss_pred             cCCCeeEEEEEc
Confidence            444433444443

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=98.38  E-value=5.7e-07  Score=75.87  Aligned_cols=67  Identities=16%  Similarity=0.356  Sum_probs=51.3

Q ss_pred             CCCceeeEECc-CCCEEEEEEcC-------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          95 SNFLQLVQWSP-VGHDLIFVKDN-------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        95 ~~~is~~~wSP-DGk~IAFV~~g-------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      ...+..++||| ||++|||+..+       +||+.+++++..++++......                 ....+.|||||
T Consensus       187 ~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~-----------------~~~~~~~spdg  249 (388)
T 3pe7_A          187 NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGE-----------------SCTHEFWVPDG  249 (388)
T ss_dssp             SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTE-----------------EEEEEEECTTS
T ss_pred             CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCc-----------------ccccceECCCC
Confidence            34568999999 99999999853       8999999888888888643200                 12357899999


Q ss_pred             CEEEEEEEcCCc
Q psy7767         167 SILAYMKFNDAR  178 (200)
Q Consensus       167 k~Laf~r~D~s~  178 (200)
                      ++|+|+..+.+.
T Consensus       250 ~~l~~~~~~~~~  261 (388)
T 3pe7_A          250 SALVYVSYLKGS  261 (388)
T ss_dssp             SCEEEEEEETTC
T ss_pred             CEEEEEecCCCC
Confidence            999998766543

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=98.38  E-value=3.9e-06  Score=66.38  Aligned_cols=75  Identities=17%  Similarity=0.197  Sum_probs=56.5

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCC-CCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDF-RSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~-g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|++..++.|++.++++ ++..++......                 .....+.|||||++|++..
T Consensus        41 ~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~-----------------~~~~~~~~spdg~~l~~~~  103 (297)
T 2ojh_A           41 PELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFAT-----------------ICNNDHGISPDGALYAISD  103 (297)
T ss_dssp             SSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCC-----------------CBCSCCEECTTSSEEEEEE
T ss_pred             CcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccc-----------------ccccceEECCCCCEEEEEE
Confidence            3467889999999999999999999999998 877777643210                 1345689999999999987


Q ss_pred             EcC-CcceEEEEEe
Q psy7767         174 FND-ARVHNMSYIH  186 (200)
Q Consensus       174 ~D~-s~v~~~~i~~  186 (200)
                      .+. ....++.+..
T Consensus       104 ~~~~~~~~l~~~~~  117 (297)
T 2ojh_A          104 KVEFGKSAIYLLPS  117 (297)
T ss_dssp             CTTTSSCEEEEEET
T ss_pred             eCCCCcceEEEEEC
Confidence            443 3455555543

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=98.34  E-value=2.5e-06  Score=79.67  Aligned_cols=63  Identities=21%  Similarity=0.103  Sum_probs=46.4

Q ss_pred             CceeeEECcCCCEEEEEEc------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      .+..++|||||++|||+..      ..|++.++++|+..+  .+...     +           ....++.|||||+.|+
T Consensus       122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~-----~-----------~~~~~~~wspDg~~l~  183 (695)
T 2bkl_A          122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIE-----G-----------GKYATPKWTPDSKGFY  183 (695)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBS-----C-----------CTTCCCEECTTSSEEE
T ss_pred             EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccC-----c-----------ccccceEEecCCCEEE
Confidence            4688999999999999963      369999999887531  11100     0           0125789999999999


Q ss_pred             EEEEcCC
Q psy7767         171 YMKFNDA  177 (200)
Q Consensus       171 f~r~D~s  177 (200)
                      |.+.|..
T Consensus       184 ~~~~d~~  190 (695)
T 2bkl_A          184 YEWLPTD  190 (695)
T ss_dssp             EEECCCC
T ss_pred             EEEecCC
Confidence            9988764

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.34  E-value=9.9e-07  Score=80.56  Aligned_cols=61  Identities=13%  Similarity=0.092  Sum_probs=49.1

Q ss_pred             CceeeEECcCCCEEEEEEc-----------CcEEEEECCC------CCeEEEe-eCCCcceEecccccceeeeeeeCCCc
Q psy7767          97 FLQLVQWSPVGHDLIFVKD-----------NNLYQAYDDF------RSINALT-RDGIKGVLFNGVADWVYEEEVFSSTK  158 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~-----------gdLyv~~~~~------g~~~rLT-~dg~~~~~~nG~pdwv~eEEi~~~~~  158 (200)
                      ....++|||||+.|+|+..           .+||+.++++      +..++|+ ....                   ...
T Consensus       131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~-------------------~~~  191 (662)
T 3azo_A          131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHR-------------------FVT  191 (662)
T ss_dssp             EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSS-------------------EEC
T ss_pred             cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCC-------------------ccc
Confidence            4578999999999999975           3799999998      7778887 4321                   234


Q ss_pred             ceEEccCCCEEEEEEEcC
Q psy7767         159 TLWFSPDGSILAYMKFND  176 (200)
Q Consensus       159 ~~~WSPDGk~Laf~r~D~  176 (200)
                      ++.|||||++|+|...+.
T Consensus       192 ~~~~SpDG~~la~~~~~~  209 (662)
T 3azo_A          192 GPRLSPDGRQAVWLAWDH  209 (662)
T ss_dssp             CCEECTTSSEEEEEEECT
T ss_pred             CceECCCCCEEEEEECCC
Confidence            678999999999998765

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=98.32  E-value=1.3e-06  Score=80.66  Aligned_cols=59  Identities=22%  Similarity=0.311  Sum_probs=48.9

Q ss_pred             CceeeEECcCCCEEEEEEcCcEEEEECCCC---CeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFR---SINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g---~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      .+..++|||||+.|+|..++.||+.+++++   ...+++..+.                   ....+.|||||++|||.+
T Consensus       110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~-------------------~~~~~~~SPDG~~la~~~  170 (741)
T 2ecf_A          110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEG-------------------FATDAKLSPKGGFVSFIR  170 (741)
T ss_dssp             ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSS-------------------CEEEEEECTTSSEEEEEE
T ss_pred             CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCc-------------------ccccccCCCCCCEEEEEe
Confidence            368899999999999999999999999988   6667765332                   234689999999999986


Q ss_pred             E
Q psy7767         174 F  174 (200)
Q Consensus       174 ~  174 (200)
                      .
T Consensus       171 ~  171 (741)
T 2ecf_A          171 G  171 (741)
T ss_dssp             T
T ss_pred             C
Confidence            3

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=98.30  E-value=2.7e-06  Score=83.14  Aligned_cols=85  Identities=16%  Similarity=0.091  Sum_probs=57.5

Q ss_pred             eecCC-CCCceeeEECcCCCEEEEEEcC-------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceE
Q psy7767          90 SDLDG-SNFLQLVQWSPVGHDLIFVKDN-------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLW  161 (200)
Q Consensus        90 ~~lt~-~~~is~~~wSPDGk~IAFV~~g-------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~  161 (200)
                      ++++. ...+..++|||||++|||+...       +||+.++++++.++|+..+..   .++.         +.....+.
T Consensus        46 ~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~lt~~~~~---~~~~---------~~~~~~~~  113 (1045)
T 1k32_A           46 RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGK---STGR---------RMFTDVAG  113 (1045)
T ss_dssp             EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEE---EETT---------EECSEEEE
T ss_pred             EEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEcccCCCc---cccc---------cccccccc
Confidence            34443 3567999999999999999642       799999999998888875421   0111         01235789


Q ss_pred             EccCCCEEEEEEEcC----CcceEEEEEee
Q psy7767         162 FSPDGSILAYMKFND----ARVHNMSYIHY  187 (200)
Q Consensus       162 WSPDGk~Laf~r~D~----s~v~~~~i~~~  187 (200)
                      |||||+ |+|....+    ....++.+...
T Consensus       114 ~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~  142 (1045)
T 1k32_A          114 FDPDGN-LIISTDAMQPFSSMTCLYRVEND  142 (1045)
T ss_dssp             ECTTCC-EEEEECTTSSSTTCCEEEEEEGG
T ss_pred             CCCCCE-EEEEECCcCCCcccceEEEEECC
Confidence            999998 88886543    23445555443

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=98.29  E-value=5.6e-07  Score=84.75  Aligned_cols=56  Identities=21%  Similarity=0.131  Sum_probs=46.6

Q ss_pred             eeeEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          99 QLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      .+++|||||+.|+|..+          +++|+.++++++..+|+....                   ....+.|||||++
T Consensus        65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~-------------------~~~~~~~SPdG~~  125 (740)
T 4a5s_A           65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPN-------------------NTQWVTWSPVGHK  125 (740)
T ss_dssp             CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCT-------------------TEEEEEECSSTTC
T ss_pred             cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCC-------------------cceeeEECCCCCE
Confidence            45899999999999987          689999999998887775332                   2346899999999


Q ss_pred             EEEEE
Q psy7767         169 LAYMK  173 (200)
Q Consensus       169 Laf~r  173 (200)
                      |||++
T Consensus       126 la~~~  130 (740)
T 4a5s_A          126 LAYVW  130 (740)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            99985

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=98.28  E-value=8.9e-06  Score=64.26  Aligned_cols=72  Identities=17%  Similarity=0.053  Sum_probs=55.4

Q ss_pred             CCceeeEECcCCCEEEEEE-----cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVK-----DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~-----~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ..+..++|||||+.|++..     ...||..+++++...+++....                    ...+.|||||++|+
T Consensus        85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~spdg~~l~  144 (297)
T 2ojh_A           85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP--------------------SYWHGWSPDGKSFT  144 (297)
T ss_dssp             CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS--------------------EEEEEECTTSSEEE
T ss_pred             ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC--------------------ccceEECCCCCEEE
Confidence            4568899999999999998     3589999988887777665321                    23578999999999


Q ss_pred             EEEEcCCcceEEEEEee
Q psy7767         171 YMKFNDARVHNMSYIHY  187 (200)
Q Consensus       171 f~r~D~s~v~~~~i~~~  187 (200)
                      |....++.+.++.+...
T Consensus       145 ~~~~~~~~~~l~~~~~~  161 (297)
T 2ojh_A          145 YCGIRDQVFDIYSMDID  161 (297)
T ss_dssp             EEEEETTEEEEEEEETT
T ss_pred             EEECCCCceEEEEEECC
Confidence            98777666666666543

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=98.18  E-value=1.3e-05  Score=73.22  Aligned_cols=80  Identities=18%  Similarity=0.123  Sum_probs=55.4

Q ss_pred             ceeecC-C-CCCceeeEECcCCCEEEEEEc---------CcEEEEECC-CC---CeEEEeeCCCcceEecccccceeeee
Q psy7767          88 DVSDLD-G-SNFLQLVQWSPVGHDLIFVKD---------NNLYQAYDD-FR---SINALTRDGIKGVLFNGVADWVYEEE  152 (200)
Q Consensus        88 ~v~~lt-~-~~~is~~~wSPDGk~IAFV~~---------gdLyv~~~~-~g---~~~rLT~dg~~~~~~nG~pdwv~eEE  152 (200)
                      .++.++ . ......++|||||++|||+..         .+||+.+++ +|   +.++++....                
T Consensus       178 ~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~----------------  241 (662)
T 3azo_A          178 AVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE----------------  241 (662)
T ss_dssp             GSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT----------------
T ss_pred             ceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC----------------
Confidence            445555 4 345678999999999999973         379999998 46   5666765321                


Q ss_pred             eeCCCcceEEccCCCEEEEEEEcCCcceEEEEEe
Q psy7767         153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIH  186 (200)
Q Consensus       153 i~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~  186 (200)
                        +....+.|||||+ |+|+...++...++.+..
T Consensus       242 --~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~  272 (662)
T 3azo_A          242 --EAIAQAEWAPDGS-LIVATDRTGWWNLHRVDP  272 (662)
T ss_dssp             --BCEEEEEECTTSC-EEEEECTTSSCEEEEECT
T ss_pred             --ceEcceEECCCCe-EEEEECCCCCeEEEEEEC
Confidence              1234689999999 888876555455555543

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=98.17  E-value=7.2e-06  Score=68.16  Aligned_cols=56  Identities=20%  Similarity=0.285  Sum_probs=45.4

Q ss_pred             CCceeeEECcCCCEEEEEE----------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767          96 NFLQLVQWSPVGHDLIFVK----------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD  165 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~----------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD  165 (200)
                      ..+..+++  ||++|||+.          .++||+.++++++.++| .                      ....+.||||
T Consensus        15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-~----------------------~~~~~~~SpD   69 (347)
T 2gop_A           15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-E----------------------NATMPRISPD   69 (347)
T ss_dssp             CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-E----------------------SCEEEEECTT
T ss_pred             EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-c----------------------cCCCeEECCC
Confidence            45688889  999999995          34799999998888777 1                      2346899999


Q ss_pred             CCEEEEEEEcC
Q psy7767         166 GSILAYMKFND  176 (200)
Q Consensus       166 Gk~Laf~r~D~  176 (200)
                      |++|||++.+.
T Consensus        70 g~~la~~~~~~   80 (347)
T 2gop_A           70 GKKIAFMRANE   80 (347)
T ss_dssp             SSEEEEEEEET
T ss_pred             CCEEEEEEecc
Confidence            99999998764

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=98.15  E-value=3.1e-06  Score=77.73  Aligned_cols=62  Identities=11%  Similarity=0.061  Sum_probs=49.3

Q ss_pred             CceeeEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          97 FLQLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      .+..++|||||++|||..+          ++||+.++++++.++++......                .....+.|||||
T Consensus        62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~----------------~~~~~~~~SPdG  125 (723)
T 1xfd_A           62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN----------------AKLQYAGWGPKG  125 (723)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS----------------CCCSBCCBCSST
T ss_pred             ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccc----------------ccccccEECCCC
Confidence            3789999999999999975          68999999998887777643210                124568999999


Q ss_pred             CEEEEEEE
Q psy7767         167 SILAYMKF  174 (200)
Q Consensus       167 k~Laf~r~  174 (200)
                      ++|||++.
T Consensus       126 ~~la~~~~  133 (723)
T 1xfd_A          126 QQLIFIFE  133 (723)
T ss_dssp             TCEEEEET
T ss_pred             CEEEEEEC
Confidence            99999864

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=98.13  E-value=2.1e-06  Score=79.32  Aligned_cols=55  Identities=27%  Similarity=0.240  Sum_probs=44.8

Q ss_pred             CceeeEECcCCCEEEEEEc----------CcEEEEECCCCCe---EEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          97 FLQLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSI---NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~---~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      .+..++|||||+.|||..+          +.|++.++++++.   .+++.                      ....+.||
T Consensus        61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~----------------------~~~~~~~S  118 (719)
T 1z68_A           61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPR----------------------PIQYLCWS  118 (719)
T ss_dssp             TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCS----------------------SBCCEEEC
T ss_pred             ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCc----------------------ccccceEC
Confidence            3788999999999999975          7899999998876   44431                      23468999


Q ss_pred             cCCCEEEEEE
Q psy7767         164 PDGSILAYMK  173 (200)
Q Consensus       164 PDGk~Laf~r  173 (200)
                      |||++|||++
T Consensus       119 PDG~~la~~~  128 (719)
T 1z68_A          119 PVGSKLAYVY  128 (719)
T ss_dssp             SSTTCEEEEE
T ss_pred             CCCCEEEEEE
Confidence            9999999985

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.13  E-value=2.4e-05  Score=65.47  Aligned_cols=81  Identities=12%  Similarity=-0.010  Sum_probs=55.0

Q ss_pred             eEECc-CCCEEEEEE-----------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767         101 VQWSP-VGHDLIFVK-----------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF  162 (200)
Q Consensus       101 ~~wSP-DGk~IAFV~-----------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W  162 (200)
                      +.||| ||+.|++..                 +.+||+.+++++..++|+........+.+..        ......+.|
T Consensus       287 ~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~  358 (396)
T 3c5m_A          287 HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDR--------QITHPHPSF  358 (396)
T ss_dssp             EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBS--------STTCCCCEE
T ss_pred             CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccc--------cCCCCCceE
Confidence            89999 999888854                 2589999999888888876432000000000        012456789


Q ss_pred             ccCCCEEEEEEEcCCcceEEEEEeeCC
Q psy7767         163 SPDGSILAYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       163 SPDGk~Laf~r~D~s~v~~~~i~~~~~  189 (200)
                      ||||++|+|...+.+...+|.+....+
T Consensus       359 s~dg~~l~~~s~~~~~~~l~~~~~~~~  385 (396)
T 3c5m_A          359 TPNDDGVLFTSDFEGVPAIYIADVPES  385 (396)
T ss_dssp             CTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred             ccCCCeEEEEecCCCCceEEEEEEccc
Confidence            999999999987766677777665554

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=98.09  E-value=1.1e-05  Score=76.16  Aligned_cols=61  Identities=15%  Similarity=0.000  Sum_probs=46.9

Q ss_pred             CceeeEECcCCCEEEEEEc--C----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD--N----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~--g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      .+..++|||||++|||..+  |    +||+.++++|+..+.+..+.                   ...++.|||| +.|+
T Consensus       164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~-------------------~~~~~~wspD-~~l~  223 (741)
T 1yr2_A          164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWV-------------------KFSGLAWLGN-DALL  223 (741)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEE-------------------ESCCCEESTT-SEEE
T ss_pred             EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCc-------------------eeccEEEECC-CEEE
Confidence            4688999999999999974  2    69999999988765432110                   1246899999 9999


Q ss_pred             EEEEcCC
Q psy7767         171 YMKFNDA  177 (200)
Q Consensus       171 f~r~D~s  177 (200)
                      |.+.+..
T Consensus       224 ~~~~~~~  230 (741)
T 1yr2_A          224 YSRFAEP  230 (741)
T ss_dssp             EEECCCC
T ss_pred             EEEecCc
Confidence            9987654

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=98.02  E-value=1.9e-05  Score=77.22  Aligned_cols=71  Identities=18%  Similarity=0.131  Sum_probs=55.4

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ...+..++|||  ++|||+..++||+.++++++.++|+....                   ....+.|||||++|||...
T Consensus        14 ~~~~~~~~~S~--~~iaf~~~~~l~~~~~~gg~~~~lt~~~~-------------------~v~~~~~SPDG~~la~~s~   72 (1045)
T 1k32_A           14 PNLLLNPDIHG--DRIIFVCCDDLWEHDLKSGSTRKIVSNLG-------------------VINNARFFPDGRKIAIRVM   72 (1045)
T ss_dssp             CCCCEEEEEET--TEEEEEETTEEEEEETTTCCEEEEECSSS-------------------EEEEEEECTTSSEEEEEEE
T ss_pred             cceEeCcEEeC--CEEEEEECCcEEEEECCCCcEEEeeeCCC-------------------cccCeEECCCCCEEEEEEe
Confidence            34678999995  69999999999999999999999986432                   2357899999999999987


Q ss_pred             c---CCcceEEEEEe
Q psy7767         175 N---DARVHNMSYIH  186 (200)
Q Consensus       175 D---~s~v~~~~i~~  186 (200)
                      +   .+...++.+..
T Consensus        73 ~~~~~~~~~i~~~d~   87 (1045)
T 1k32_A           73 RGSSLNTADLYFYNG   87 (1045)
T ss_dssp             ESTTCCEEEEEEEET
T ss_pred             eccCCCCCeEEEEEC
Confidence            6   34444444443

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.97  E-value=1.9e-05  Score=75.47  Aligned_cols=61  Identities=15%  Similarity=0.146  Sum_probs=45.3

Q ss_pred             CceeeEEC-cCCCEEEEEEcC------cEEEEECCCC-CeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          97 FLQLVQWS-PVGHDLIFVKDN------NLYQAYDDFR-SINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        97 ~is~~~wS-PDGk~IAFV~~g------dLyv~~~~~g-~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      .+..++|| |||++|||+.+.      .||+.++++| +.  ++ +.-    .             ....++.|||||+.
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~-~~~----~-------------~~~~~~~WspDg~~  234 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IA-DKV----S-------------GTNGEIVWGPDHTS  234 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--CC-CCE----E-------------EECSCCEECSSTTE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--CC-ccc----c-------------CceeeEEEecCCCE
Confidence            35789999 999999999753      3999999988 52  21 110    0             02346899999999


Q ss_pred             EEEEEEcCC
Q psy7767         169 LAYMKFNDA  177 (200)
Q Consensus       169 Laf~r~D~s  177 (200)
                      |+|++.+++
T Consensus       235 l~y~~~d~~  243 (751)
T 2xe4_A          235 LFYVTKDET  243 (751)
T ss_dssp             EEEEEECTT
T ss_pred             EEEEEECCC
Confidence            999998764

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=97.91  E-value=9.9e-05  Score=67.81  Aligned_cols=72  Identities=17%  Similarity=0.160  Sum_probs=51.9

Q ss_pred             eeecCCC-CCcee-eEECcCCCEEEEEEcC------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcce
Q psy7767          89 VSDLDGS-NFLQL-VQWSPVGHDLIFVKDN------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTL  160 (200)
Q Consensus        89 v~~lt~~-~~is~-~~wSPDGk~IAFV~~g------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~  160 (200)
                      ++.++.+ ..+.. +.|||||+.|+|....      .||..+++++..++++..+.                    ...+
T Consensus       347 ~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~--------------------~~~~  406 (706)
T 2z3z_A          347 IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTPESG--------------------MHRT  406 (706)
T ss_dssp             EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCCSSS--------------------EEEE
T ss_pred             EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccCCCc--------------------eEEE
Confidence            4445543 33444 7999999999999743      79999998888888875321                    2357


Q ss_pred             EEccCCCEEEEEEEcCCcce
Q psy7767         161 WFSPDGSILAYMKFNDARVH  180 (200)
Q Consensus       161 ~WSPDGk~Laf~r~D~s~v~  180 (200)
                      .|||||++|++...+....+
T Consensus       407 ~~spdg~~l~~~~~~~~~p~  426 (706)
T 2z3z_A          407 QLSPDGSAIIDIFQSPTVPR  426 (706)
T ss_dssp             EECTTSSEEEEEEECSSCSC
T ss_pred             EECCCCCEEEEEecCCCCCc
Confidence            99999999999866554333

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=97.90  E-value=3.4e-05  Score=69.71  Aligned_cols=85  Identities=15%  Similarity=0.044  Sum_probs=53.0

Q ss_pred             ceeecCC-CCCceeeEECcCCCEEEEEE-cC--cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          88 DVSDLDG-SNFLQLVQWSPVGHDLIFVK-DN--NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        88 ~v~~lt~-~~~is~~~wSPDGk~IAFV~-~g--dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      +++.++. ......++|||||+.|+... ++  .||+.++++++.. ++......+  .+.    ..    .......||
T Consensus       186 ~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~--~~~----~~----~~~~~~~~s  254 (582)
T 3o4h_A          186 GLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDF--SSY----RP----TAITWLGYL  254 (582)
T ss_dssp             CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHH--HHH----CC----SEEEEEEEC
T ss_pred             CceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcCh--hhh----hh----ccccceeEc
Confidence            4445554 34468999999999999433 34  7999999988877 554332110  000    00    001123499


Q ss_pred             cCCCEEEEEEEcCCcceEEEE
Q psy7767         164 PDGSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       164 PDGk~Laf~r~D~s~v~~~~i  184 (200)
                      ||| +|+|...+++.+..+.+
T Consensus       255 pdg-~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          255 PDG-RLAVVARREGRSAVFID  274 (582)
T ss_dssp             TTS-CEEEEEEETTEEEEEET
T ss_pred             CCC-cEEEEEEcCCcEEEEEE
Confidence            999 78888777776666654

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=97.88  E-value=8.9e-05  Score=69.65  Aligned_cols=94  Identities=10%  Similarity=0.069  Sum_probs=60.5

Q ss_pred             EEeccCcceeEEEEEeeeeeeeeeecCCCCccceeecCCC--CCceeeEECcCCCEEEEEEc--C----cEEEEECCCCC
Q psy7767          56 LQRSTDIALKLSIRCLTWKQSHSLSGRPDTLTDVSDLDGS--NFLQLVQWSPVGHDLIFVKD--N----NLYQAYDDFRS  127 (200)
Q Consensus        56 ~~~~~~~~~kv~i~~n~~~~R~s~~a~~~~~~~v~~lt~~--~~is~~~wSPDGk~IAFV~~--g----dLyv~~~~~g~  127 (200)
                      +-..++.++.+.++-..++.       .-.+-+...+..+  ..+..++|||||++|||+.+  |    .|++.++++|+
T Consensus        94 ~~~~~~~~~~~~~r~~~~~~-------~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~  166 (693)
T 3iuj_A           94 FKNDGLQNQNVLWRQQEGKP-------AEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ  166 (693)
T ss_dssp             EEECSSCSSCEEEEECTTSC-------CEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS
T ss_pred             EEEcCCCceeEEEEeCCCCC-------cEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC
Confidence            44467788878887432111       0001122222211  24678899999999999973  2    69999999998


Q ss_pred             eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767         128 INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND  176 (200)
Q Consensus       128 ~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~  176 (200)
                      ..+.+..+.                   ...++.|| ||+.|+|.+.+.
T Consensus       167 ~~~~~~~~~-------------------k~~~~~Ws-Dg~~l~y~~~~~  195 (693)
T 3iuj_A          167 PLETPLKDV-------------------KFSGISWL-GNEGFFYSSYDK  195 (693)
T ss_dssp             EEEEEEEEE-------------------ESCCCEEE-TTTEEEEEESSC
T ss_pred             CCccccCCc-------------------eeccEEEe-CCCEEEEEEecC
Confidence            765543211                   23568999 999999998874

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=97.73  E-value=0.00021  Score=66.69  Aligned_cols=70  Identities=9%  Similarity=0.008  Sum_probs=48.0

Q ss_pred             eeeEECcCCCEEEEEEcC--------------cEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767          99 QLVQWSPVGHDLIFVKDN--------------NLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF  162 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~~g--------------dLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W  162 (200)
                      ..++|||||+.|+|+...              +||+.++.++..  +.+......       +         ....++.|
T Consensus       171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~-------~---------~~~~~~~~  234 (695)
T 2bkl_A          171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD-------P---------TTFLQSDL  234 (695)
T ss_dssp             CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-------T---------TCEEEEEE
T ss_pred             cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-------C---------EEEEEEEE
Confidence            789999999999999752              399999987763  334332110       0         02346789


Q ss_pred             ccCCCEEEEEEEcC-CcceEEEE
Q psy7767         163 SPDGSILAYMKFND-ARVHNMSY  184 (200)
Q Consensus       163 SPDGk~Laf~r~D~-s~v~~~~i  184 (200)
                      ||||++|+|.+.+. ....++.+
T Consensus       235 SpDG~~l~~~~~~~~~~~~l~~~  257 (695)
T 2bkl_A          235 SRDGKYLFVYILRGWSENDVYWK  257 (695)
T ss_dssp             CTTSCCEEEEEEETTTEEEEEEE
T ss_pred             CCCCCEEEEEEeCCCCceEEEEE
Confidence            99999999998776 33344443

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=97.62  E-value=0.00032  Score=65.47  Aligned_cols=74  Identities=9%  Similarity=-0.031  Sum_probs=47.6

Q ss_pred             ceeeEECcCCCEEEEEEcC-----------------cEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767          98 LQLVQWSPVGHDLIFVKDN-----------------NLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTK  158 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~g-----------------dLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~  158 (200)
                      +..++|||||+.|+|++..                 +||+.++.++..  +.+...+..       +.         ...
T Consensus       173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~-------~~---------~~~  236 (710)
T 2xdw_A          173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE-------PK---------WMG  236 (710)
T ss_dssp             SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC-------TT---------CEE
T ss_pred             cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC-------Ce---------EEE
Confidence            5789999999999999742                 299998876653  223222110       00         123


Q ss_pred             ceEEccCCCEEEEEEEcCC--cceEEEEEee
Q psy7767         159 TLWFSPDGSILAYMKFNDA--RVHNMSYIHY  187 (200)
Q Consensus       159 ~~~WSPDGk~Laf~r~D~s--~v~~~~i~~~  187 (200)
                      ++.|||||++|+|...+..  ...++.+...
T Consensus       237 ~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~  267 (710)
T 2xdw_A          237 GAELSDDGRYVLLSIREGCDPVNRLWYCDLQ  267 (710)
T ss_dssp             EEEECTTSCEEEEEEECSSSSCCEEEEEEGG
T ss_pred             EEEEcCCCCEEEEEEEccCCCccEEEEEECc
Confidence            6789999999999876443  2344444433

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=97.60  E-value=0.0003  Score=60.44  Aligned_cols=75  Identities=12%  Similarity=0.061  Sum_probs=54.2

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.||... ++.|.+.++.+++..+-...|-.                 +....+.|||||++||= .
T Consensus       269 ~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~-----------------~~V~~v~fSpdg~~laS-~  330 (365)
T 4h5i_A          269 FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHS-----------------FAITEVTISPDSTYVAS-V  330 (365)
T ss_dssp             CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSS-----------------SCEEEEEECTTSCEEEE-E
T ss_pred             CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCccc-----------------CCEEEEEECCCCCEEEE-E
Confidence            45678999999999999876 56899999987765432222210                 12357899999999874 4


Q ss_pred             EcCCcceEEEEEee
Q psy7767         174 FNDARVHNMSYIHY  187 (200)
Q Consensus       174 ~D~s~v~~~~i~~~  187 (200)
                      ..++.+.++.++..
T Consensus       331 S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          331 SAANTIHIIKLPLN  344 (365)
T ss_dssp             ETTSEEEEEECCTT
T ss_pred             eCCCeEEEEEcCCC
Confidence            55677999888644

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=97.55  E-value=0.00081  Score=55.08  Aligned_cols=74  Identities=14%  Similarity=0.041  Sum_probs=51.2

Q ss_pred             cCCCCCcee-eEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          92 LDGSNFLQL-VQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        92 lt~~~~is~-~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      +..+..... ++|||||+.|+...++    .|++.++++++..+....+.                   ....+.|||||
T Consensus        79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-------------------~~~~~~~spdg  139 (331)
T 3u4y_A           79 IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-------------------DAVGIAISPNG  139 (331)
T ss_dssp             EEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-------------------TEEEEEECTTS
T ss_pred             cccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-------------------CccceEECCCC
Confidence            334445556 9999999999833333    79999998887765554332                   23478999999


Q ss_pred             CEEEEEEEcCCc-ceEEEE
Q psy7767         167 SILAYMKFNDAR-VHNMSY  184 (200)
Q Consensus       167 k~Laf~r~D~s~-v~~~~i  184 (200)
                      ++|+....+... +..|.+
T Consensus       140 ~~l~~~~~~~~~~i~~~~~  158 (331)
T 3u4y_A          140 NGLILIDRSSANTVRRFKI  158 (331)
T ss_dssp             SCEEEEEETTTTEEEEEEE
T ss_pred             CEEEEEecCCCceEEEEEE
Confidence            988766565555 665554

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=97.50  E-value=0.00028  Score=58.70  Aligned_cols=74  Identities=8%  Similarity=-0.025  Sum_probs=50.4

Q ss_pred             CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ......++|||||+ |+++..    +.|++.++++++.+++..-..     .           ......+.|||||++|+
T Consensus        39 ~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-----~-----------~~~p~~~a~spdg~~l~  101 (347)
T 3hfq_A           39 TQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-----P-----------GTPPAYVAVDEARQLVY  101 (347)
T ss_dssp             CSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEE-----E-----------SCCCSEEEEETTTTEEE
T ss_pred             cCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeec-----C-----------CCCCEEEEECCCCCEEE
Confidence            34567899999999 666653    589999987777666654110     0           02456789999999887


Q ss_pred             EEEEcCCcceEEEEE
Q psy7767         171 YMKFNDARVHNMSYI  185 (200)
Q Consensus       171 f~r~D~s~v~~~~i~  185 (200)
                      ....+++.+..+.+.
T Consensus       102 ~~~~~~~~v~v~~~~  116 (347)
T 3hfq_A          102 SANYHKGTAEVMKIA  116 (347)
T ss_dssp             EEETTTTEEEEEEEC
T ss_pred             EEeCCCCEEEEEEeC
Confidence            665455666666653

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.50  E-value=0.00033  Score=66.86  Aligned_cols=73  Identities=11%  Similarity=0.055  Sum_probs=49.0

Q ss_pred             ceeeEECcCCCEEEEEEc------CcEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          98 LQLVQWSPVGHDLIFVKD------NNLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~------gdLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ...++|||||+.|+|++.      .+||+.++.++..  +.+.......                 ...++.|||||++|
T Consensus       223 ~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~-----------------~~~~~~~SpDg~~l  285 (751)
T 2xe4_A          223 NGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPL-----------------FSAFMYKAADTNTL  285 (751)
T ss_dssp             CSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTT-----------------CEEEEEECTTSSEE
T ss_pred             eeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCc-----------------eEEEEEECCCCCEE
Confidence            357899999999999974      2699998877642  2333211100                 12357899999999


Q ss_pred             EEEEEcCCcceEEEEEee
Q psy7767         170 AYMKFNDARVHNMSYIHY  187 (200)
Q Consensus       170 af~r~D~s~v~~~~i~~~  187 (200)
                      +|...+.....++.++..
T Consensus       286 ~~~~~~~~~~~l~~~d~~  303 (751)
T 2xe4_A          286 CIGSQSPETAEVHLLDLR  303 (751)
T ss_dssp             EEEEECSSCEEEEEEESS
T ss_pred             EEEecCCCCceEEEEECC
Confidence            999866554455544443

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=97.50  E-value=0.0011  Score=56.36  Aligned_cols=72  Identities=18%  Similarity=0.174  Sum_probs=53.5

Q ss_pred             CCCCceeeEECcCCCEEEEEEc----------------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCC
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVKD----------------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSST  157 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~~----------------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~  157 (200)
                      ....+..++|+|||+.|+....                |.|++.++.+++..+....+.                   ..
T Consensus       343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~-------------------~~  403 (433)
T 3bws_A          343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN-------------------QP  403 (433)
T ss_dssp             CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS-------------------SE
T ss_pred             CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC-------------------CC
Confidence            4566789999999999988865                389999998877665544321                   23


Q ss_pred             cceEEccCCCEEEEEEEcCCcceEEEE
Q psy7767         158 KTLWFSPDGSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       158 ~~~~WSPDGk~Laf~r~D~s~v~~~~i  184 (200)
                      .++.|||||+.|+....+++.+..+.+
T Consensus       404 ~~~~~s~dg~~l~~~~~~d~~i~v~~~  430 (433)
T 3bws_A          404 TGLDVSPDNRYLVISDFLDHQIRVYRR  430 (433)
T ss_dssp             EEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred             ceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence            578999999998766555677777765

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=97.44  E-value=0.0011  Score=55.50  Aligned_cols=70  Identities=16%  Similarity=0.135  Sum_probs=50.4

Q ss_pred             CCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ....+..++|||||+.|+++.  ++.|.+.++.+++..+....+.                   ....+.|||||++|++
T Consensus        30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-------------------~v~~~~~spdg~~l~~   90 (391)
T 1l0q_A           30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-------------------SPQGVAVSPDGKQVYV   90 (391)
T ss_dssp             CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-------------------SEEEEEECTTSSEEEE
T ss_pred             cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-------------------CccceEECCCCCEEEE
Confidence            345678999999999997774  6789999998877655444322                   2346889999999987


Q ss_pred             EEEcCCcceEE
Q psy7767         172 MKFNDARVHNM  182 (200)
Q Consensus       172 ~r~D~s~v~~~  182 (200)
                      ...+++.+..+
T Consensus        91 ~~~~~~~v~v~  101 (391)
T 1l0q_A           91 TNMASSTLSVI  101 (391)
T ss_dssp             EETTTTEEEEE
T ss_pred             EECCCCEEEEE
Confidence            75555544443

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=97.43  E-value=0.00075  Score=56.55  Aligned_cols=78  Identities=9%  Similarity=0.010  Sum_probs=49.3

Q ss_pred             CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      +.....++|||||+.|+.+.  ++.|.+.+++++....+..-...   ..+          +....++.|||||++|+..
T Consensus       210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~---~~~----------~~~~~~i~~spdg~~l~v~  276 (361)
T 3scy_A          210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD---TVN----------AQGSGDIHLSPDGKYLYAS  276 (361)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC---SSC----------CCCEEEEEECTTSSEEEEE
T ss_pred             CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC---CCC----------CCCcccEEECCCCCEEEEE
Confidence            45567899999999988776  46788888876655433321100   000          1123578999999988655


Q ss_pred             EEc-CCcceEEEEE
Q psy7767         173 KFN-DARVHNMSYI  185 (200)
Q Consensus       173 r~D-~s~v~~~~i~  185 (200)
                      ..+ ...+.+|.+.
T Consensus       277 ~~~~~~~i~v~~~~  290 (361)
T 3scy_A          277 NRLKADGVAIFKVD  290 (361)
T ss_dssp             ECSSSCEEEEEEEC
T ss_pred             CCCCCCEEEEEEEc
Confidence            444 4556666653

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=97.40  E-value=0.0019  Score=54.17  Aligned_cols=70  Identities=23%  Similarity=0.221  Sum_probs=51.0

Q ss_pred             CCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      .+..+..++|||||+.|++..  ++.|++.++.+++..+....+.                   ....+.|||||+.|++
T Consensus        72 ~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~~  132 (391)
T 1l0q_A           72 AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-------------------SPLGLALSPDGKKLYV  132 (391)
T ss_dssp             CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-------------------SEEEEEECTTSSEEEE
T ss_pred             CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-------------------CcceEEECCCCCEEEE
Confidence            345788999999999998886  3689999998887765554332                   2346899999998877


Q ss_pred             EEEcCCcceEE
Q psy7767         172 MKFNDARVHNM  182 (200)
Q Consensus       172 ~r~D~s~v~~~  182 (200)
                      ...+++.+..+
T Consensus       133 ~~~~~~~v~~~  143 (391)
T 1l0q_A          133 TNNGDKTVSVI  143 (391)
T ss_dssp             EETTTTEEEEE
T ss_pred             EeCCCCEEEEE
Confidence            76555444433

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=97.38  E-value=0.002  Score=52.24  Aligned_cols=74  Identities=11%  Similarity=-0.012  Sum_probs=50.7

Q ss_pred             CCCCceeeEECcCCCEEEEEEc--CcEEEEECC--CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVKD--NNLYQAYDD--FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~~--gdLyv~~~~--~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      .......++|||||+.|+++..  +.|.+.+++  +++...+..-..      +           +....+.|||||++|
T Consensus        36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~------~-----------~~~~~~~~s~dg~~l   98 (343)
T 1ri6_A           36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL------P-----------GSLTHISTDHQGQFV   98 (343)
T ss_dssp             CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC------S-----------SCCSEEEECTTSSEE
T ss_pred             cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc------C-----------CCCcEEEEcCCCCEE
Confidence            3456778999999999988876  678877766  566554443110      0           134578999999988


Q ss_pred             EEEEEcCCcceEEEE
Q psy7767         170 AYMKFNDARVHNMSY  184 (200)
Q Consensus       170 af~r~D~s~v~~~~i  184 (200)
                      ++...+++.+..+.+
T Consensus        99 ~~~~~~~~~i~~~d~  113 (343)
T 1ri6_A           99 FVGSYNAGNVSVTRL  113 (343)
T ss_dssp             EEEETTTTEEEEEEE
T ss_pred             EEEecCCCeEEEEEC
Confidence            766555566666665

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=97.33  E-value=0.0024  Score=51.69  Aligned_cols=57  Identities=19%  Similarity=0.064  Sum_probs=42.9

Q ss_pred             CceeeEECcCCCEEEEEE-------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          97 FLQLVQWSPVGHDLIFVK-------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~-------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      ....++|||||+.|++..             ++.|++.++++++..+....+.                   ....+.||
T Consensus        83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-------------------~~~~~~~s  143 (337)
T 1pby_B           83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR-------------------QITMLAWA  143 (337)
T ss_dssp             CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-------------------SCCCEEEC
T ss_pred             cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC-------------------CcceeEEC
Confidence            567889999999998884             4789999998776654443332                   34567899


Q ss_pred             cCCCEEEEE
Q psy7767         164 PDGSILAYM  172 (200)
Q Consensus       164 PDGk~Laf~  172 (200)
                      |||++|++.
T Consensus       144 ~dg~~l~~~  152 (337)
T 1pby_B          144 RDGSKLYGL  152 (337)
T ss_dssp             TTSSCEEEE
T ss_pred             CCCCEEEEe
Confidence            999988765

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=97.32  E-value=0.0032  Score=53.91  Aligned_cols=69  Identities=14%  Similarity=0.117  Sum_probs=49.2

Q ss_pred             cCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEE-EeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          92 LDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINA-LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        92 lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~r-LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      +.....+.+++|||||+.|+...++.+.+.+...+.... .+..+..                 .....+.|||||+.|+
T Consensus       173 ~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~v~~v~fspdg~~l~  235 (365)
T 4h5i_A          173 IETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKN-----------------WSLSKINFIADDTVLI  235 (365)
T ss_dssp             EECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTT-----------------EEEEEEEEEETTEEEE
T ss_pred             eCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCC-----------------CCEEEEEEcCCCCEEE
Confidence            334567899999999999999998888888877666543 2322210                 0234688999999988


Q ss_pred             EEEEcCC
Q psy7767         171 YMKFNDA  177 (200)
Q Consensus       171 f~r~D~s  177 (200)
                      ....+.+
T Consensus       236 ~~s~d~~  242 (365)
T 4h5i_A          236 AASLKKG  242 (365)
T ss_dssp             EEEESSS
T ss_pred             EEecCCc
Confidence            7766653

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=97.23  E-value=0.0018  Score=52.37  Aligned_cols=56  Identities=16%  Similarity=-0.086  Sum_probs=41.7

Q ss_pred             CceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....++|||||+.|+.. ++.|++.++++++.......+.                   ...++.|||||++|+..
T Consensus       242 ~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~~~  297 (337)
T 1pby_B          242 FYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPH-------------------SYYSVNVSTDGSTVWLG  297 (337)
T ss_dssp             CEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSS-------------------CCCEEEECTTSCEEEEE
T ss_pred             ceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCC-------------------ceeeEEECCCCCEEEEE
Confidence            34568999999998766 8999999998776654443221                   34578999999987654

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=97.21  E-value=0.0012  Score=54.08  Aligned_cols=65  Identities=6%  Similarity=-0.025  Sum_probs=46.5

Q ss_pred             CCCCceeeEECcCCCEEEEEE--------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK--------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD  165 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~--------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD  165 (200)
                      .+.....+++||||+.|+...        ++.|++.+.++++..+....+.                   ...++.||||
T Consensus        39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------------------~~~~~~~s~d   99 (353)
T 3vgz_A           39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-------------------KPFGATINNT   99 (353)
T ss_dssp             EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-------------------CCCSEEEETT
T ss_pred             hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-------------------CcceEEECCC
Confidence            345678899999999997776        3479999988877655444222                   3457899999


Q ss_pred             CCEEEEEEEcCC
Q psy7767         166 GSILAYMKFNDA  177 (200)
Q Consensus       166 Gk~Laf~r~D~s  177 (200)
                      |++|++....+.
T Consensus       100 g~~l~v~~~~~~  111 (353)
T 3vgz_A          100 TQTLWFGNTVNS  111 (353)
T ss_dssp             TTEEEEEETTTT
T ss_pred             CCEEEEEecCCC
Confidence            998766544333

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=97.20  E-value=0.0021  Score=52.18  Aligned_cols=76  Identities=11%  Similarity=0.007  Sum_probs=46.9

Q ss_pred             eecCCCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeE---EEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          90 SDLDGSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSIN---ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        90 ~~lt~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~---rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      ..+........++|||||+.|++..  ++.|.+.+++.+...   +....+                   .....+.|||
T Consensus        78 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------------------~~~~~~~~s~  138 (343)
T 1ri6_A           78 AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-------------------DGCHSANISP  138 (343)
T ss_dssp             EEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-------------------TTBCCCEECT
T ss_pred             cccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-------------------CCceEEEECC
Confidence            3333334678899999999988876  456888877433322   221111                   1345688999


Q ss_pred             CCCEEEEEEEcCCcceEEEE
Q psy7767         165 DGSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~~~~i  184 (200)
                      ||++|+.....+..+..+.+
T Consensus       139 dg~~l~~~~~~~~~v~~~d~  158 (343)
T 1ri6_A          139 DNRTLWVPALKQDRICLFTV  158 (343)
T ss_dssp             TSSEEEEEEGGGTEEEEEEE
T ss_pred             CCCEEEEecCCCCEEEEEEe
Confidence            99988655424444555444

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=97.20  E-value=0.0017  Score=54.37  Aligned_cols=73  Identities=12%  Similarity=0.076  Sum_probs=47.4

Q ss_pred             CceeeEECcCCCEEEEEEc---CcEEEEECC--CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD---NNLYQAYDD--FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~---gdLyv~~~~--~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ....++|||||+.|+....   +.|.+.+++  ++....+..-..      |           .....+.|||||++|+.
T Consensus       260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~------g-----------~~~~~~~~spdg~~l~~  322 (361)
T 3scy_A          260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT------G-----------IHPRNFIITPNGKYLLV  322 (361)
T ss_dssp             CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC------S-----------SCCCEEEECTTSCEEEE
T ss_pred             CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC------C-----------CCCceEEECCCCCEEEE
Confidence            3568999999999866653   346665554  555444432110      1           13567899999998876


Q ss_pred             EEEcCCcceEEEEEe
Q psy7767         172 MKFNDARVHNMSYIH  186 (200)
Q Consensus       172 ~r~D~s~v~~~~i~~  186 (200)
                      ...+...+..|.+..
T Consensus       323 ~~~~~~~v~v~~~d~  337 (361)
T 3scy_A          323 ACRDTNVIQIFERDQ  337 (361)
T ss_dssp             EETTTTEEEEEEECT
T ss_pred             EECCCCCEEEEEEEC
Confidence            655666777776653

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=97.20  E-value=0.0022  Score=60.24  Aligned_cols=71  Identities=7%  Similarity=-0.035  Sum_probs=45.1

Q ss_pred             eeeEECcCCCEEEEEEcC---------------cEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCcceE
Q psy7767          99 QLVQWSPVGHDLIFVKDN---------------NLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLW  161 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~~g---------------dLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~  161 (200)
                      ..++|||| +.|+|++..               +||+.++.++..  +.+......       +.         ...++.
T Consensus       212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~-------~~---------~~~~~~  274 (741)
T 1yr2_A          212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL-------PK---------RGHGAS  274 (741)
T ss_dssp             CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC-------TT---------CEEEEE
T ss_pred             ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC-------Ce---------EEEEEE
Confidence            67899999 999999732               388888766542  223221110       00         124688


Q ss_pred             EccCCCEEEEEEEcC--CcceEEEEEe
Q psy7767         162 FSPDGSILAYMKFND--ARVHNMSYIH  186 (200)
Q Consensus       162 WSPDGk~Laf~r~D~--s~v~~~~i~~  186 (200)
                      |||||++|+|...+.  ....++.++.
T Consensus       275 ~SpDG~~l~~~~~~~~~~~~~l~~~d~  301 (741)
T 1yr2_A          275 VSSDGRWVVITSSEGTDPVNTVHVARV  301 (741)
T ss_dssp             ECTTSCEEEEEEECTTCSCCEEEEEEE
T ss_pred             ECCCCCEEEEEEEccCCCcceEEEEEC
Confidence            999999999998764  2334444443

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=97.18  E-value=0.0088  Score=48.65  Aligned_cols=66  Identities=15%  Similarity=0.030  Sum_probs=44.5

Q ss_pred             CceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCC-cceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGI-KGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~-~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ....++|||||+.+++..  ++.|++.++++++..+....+. ...  .+           ....++.|||||++|++..
T Consensus        44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~--~~-----------~~~~~~~~spdg~~l~~~~  110 (349)
T 1jmx_B           44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGE--VG-----------RSMYSFAISPDGKEVYATV  110 (349)
T ss_dssp             SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTE--EE-----------ECSSCEEECTTSSEEEEEE
T ss_pred             CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccc--cc-----------ccccceEECCCCCEEEEEc
Confidence            467889999999877665  4579999998877654333221 000  00           1246789999999998776


Q ss_pred             Ec
Q psy7767         174 FN  175 (200)
Q Consensus       174 ~D  175 (200)
                      .+
T Consensus       111 ~~  112 (349)
T 1jmx_B          111 NP  112 (349)
T ss_dssp             EE
T ss_pred             cc
Confidence            44

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=97.17  E-value=0.0019  Score=52.82  Aligned_cols=60  Identities=15%  Similarity=0.094  Sum_probs=43.0

Q ss_pred             CCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCe---EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSI---NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~---~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      .+.....++|||||+.++++.  ++.|++.++++++.   .+....+                   ....++.|||||++
T Consensus       174 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-------------------~~~~~~~~spdg~~  234 (331)
T 3u4y_A          174 GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-------------------NLPGTIVVSRDGST  234 (331)
T ss_dssp             SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-------------------SCCCCEEECTTSSE
T ss_pred             CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-------------------CCCceEEECCCCCE
Confidence            345678899999999987775  45799999887765   3222222                   13457899999998


Q ss_pred             EEEE
Q psy7767         169 LAYM  172 (200)
Q Consensus       169 Laf~  172 (200)
                      |+..
T Consensus       235 l~v~  238 (331)
T 3u4y_A          235 VYVL  238 (331)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8655

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=97.13  E-value=0.0014  Score=54.36  Aligned_cols=74  Identities=12%  Similarity=0.036  Sum_probs=47.4

Q ss_pred             CceeeEECcCCCEEEEEE--cCcEEEEECC-CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDD-FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~-~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ....++|||||+.|+...  ++.|.+.+++ +|....+..-..     .|           ....++.|||||++|+...
T Consensus       241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-----~~-----------~~~~~~~~spdg~~l~v~~  304 (347)
T 3hfq_A          241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST-----EG-----------DFPRDFDLDPTEAFVVVVN  304 (347)
T ss_dssp             EEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC-----SS-----------SCCCEEEECTTSSEEEEEE
T ss_pred             cceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec-----CC-----------CCcCeEEECCCCCEEEEEE
Confidence            356789999999986664  3568887775 233333322100     00           1356789999999887665


Q ss_pred             EcCCcceEEEEEe
Q psy7767         174 FNDARVHNMSYIH  186 (200)
Q Consensus       174 ~D~s~v~~~~i~~  186 (200)
                      .+...+..|.+..
T Consensus       305 ~~~~~v~v~~~d~  317 (347)
T 3hfq_A          305 QNTDNATLYARDL  317 (347)
T ss_dssp             TTTTEEEEEEECT
T ss_pred             cCCCcEEEEEEeC
Confidence            5666677776643

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=97.10  E-value=0.0023  Score=54.42  Aligned_cols=76  Identities=12%  Similarity=0.105  Sum_probs=46.5

Q ss_pred             CCCceeeEECcCCCEEEEEE--cCcEEEEECC-CCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDD-FRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~-~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      +.....++|||||+.|+...  .+.|++.+++ +|+...+..-..+   ..|           .....+.|||||++|+.
T Consensus       144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~---~~g-----------~~p~~~~~spdg~~l~v  209 (365)
T 1jof_A          144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAP---DPG-----------DHPRWVAMHPTGNYLYA  209 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS---STT-----------CCEEEEEECTTSSEEEE
T ss_pred             CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC---CCC-----------CCCCEeEECCCCCEEEE
Confidence            45678899999999875554  3479998887 6665433220000   000           12456799999998865


Q ss_pred             EEEcCCcceEEEE
Q psy7767         172 MKFNDARVHNMSY  184 (200)
Q Consensus       172 ~r~D~s~v~~~~i  184 (200)
                      .....+.+..+.+
T Consensus       210 ~~~~~~~v~v~~~  222 (365)
T 1jof_A          210 LMEAGNRICEYVI  222 (365)
T ss_dssp             EETTTTEEEEEEE
T ss_pred             EECCCCeEEEEEE
Confidence            5434445555543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=97.07  E-value=0.0039  Score=58.46  Aligned_cols=66  Identities=8%  Similarity=-0.008  Sum_probs=43.7

Q ss_pred             ceeeEECcCCCEEEEEEcC--------------cEEEEECCCCCe--EEEeeCCCcceEecccccceeeeeeeCCCcceE
Q psy7767          98 LQLVQWSPVGHDLIFVKDN--------------NLYQAYDDFRSI--NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLW  161 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~g--------------dLyv~~~~~g~~--~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~  161 (200)
                      ...++|| ||+.|+|++..              +||+.++.++..  +.|......      .+.         ...++.
T Consensus       177 ~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~------~~~---------~~~~~~  240 (693)
T 3iuj_A          177 FSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPA------QHH---------RYVGAT  240 (693)
T ss_dssp             SCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGG------GCC---------SEEEEE
T ss_pred             eccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCC------CCe---------EEEEEE
Confidence            4678999 99999999754              388887765432  344432210      000         123678


Q ss_pred             EccCCCEEEEEEEcCCcc
Q psy7767         162 FSPDGSILAYMKFNDARV  179 (200)
Q Consensus       162 WSPDGk~Laf~r~D~s~v  179 (200)
                      |||||++|+|.+......
T Consensus       241 ~SpDg~~l~~~~~~~~~~  258 (693)
T 3iuj_A          241 VTEDDRFLLISAANSTSG  258 (693)
T ss_dssp             ECTTSCEEEEEEESSSSC
T ss_pred             EcCCCCEEEEEEccCCCC
Confidence            999999999987755443

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=96.98  E-value=0.0039  Score=50.79  Aligned_cols=55  Identities=16%  Similarity=-0.003  Sum_probs=42.2

Q ss_pred             CceeeEECc-CCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          97 FLQLVQWSP-VGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        97 ~is~~~wSP-DGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ....+.+|| ||+.++.. .+.|++.++.+++..+....+.                   ....+.|||||++|+.
T Consensus       256 ~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~~  311 (349)
T 1jmx_B          256 LYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDH-------------------TYYCVAFDKKGDKLYL  311 (349)
T ss_dssp             CEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSS-------------------CCCEEEECSSSSCEEE
T ss_pred             cceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCC-------------------CccceEECCCCCEEEE
Confidence            457789999 99998777 8899999998877654444331                   2346899999998865

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=96.90  E-value=0.025  Score=45.44  Aligned_cols=71  Identities=13%  Similarity=0.077  Sum_probs=51.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..+.|+|||+.|+... ++.|.+.++..++.........                   ....+.|||||+.|+. .
T Consensus       265 ~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-------------------~v~~~~~s~~~~~l~~-~  324 (337)
T 1gxr_A          265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-------------------SVLSCDISVDDKYIVT-G  324 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-------------------CEEEEEECTTSCEEEE-E
T ss_pred             ccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCC-------------------cEEEEEECCCCCEEEE-e
Confidence            56689999999999988776 5679999998777653332221                   2346899999998865 4


Q ss_pred             EcCCcceEEEEE
Q psy7767         174 FNDARVHNMSYI  185 (200)
Q Consensus       174 ~D~s~v~~~~i~  185 (200)
                      ..++.+..+.+.
T Consensus       325 ~~dg~i~iw~~~  336 (337)
T 1gxr_A          325 SGDKKATVYEVI  336 (337)
T ss_dssp             ETTSCEEEEEEE
T ss_pred             cCCCeEEEEEEe
Confidence            556677777654

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=96.85  E-value=0.0036  Score=57.26  Aligned_cols=69  Identities=13%  Similarity=0.086  Sum_probs=47.5

Q ss_pred             CCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          96 NFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      +....++|||||+.||+..++.+.+.++.++...+.-....                  +....+.|||||++||-. ..
T Consensus        19 g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~------------------~~v~~~~~spdg~~lasg-~~   79 (611)
T 1nr0_A           19 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHS------------------HQTTVAKTSPSGYYCASG-DV   79 (611)
T ss_dssp             TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCS------------------SCEEEEEECTTSSEEEEE-ET
T ss_pred             CceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCC------------------CceEEEEECCCCcEEEEE-eC
Confidence            45677899999999999999999999987655433222111                  123468999999988744 34


Q ss_pred             CCcceEEE
Q psy7767         176 DARVHNMS  183 (200)
Q Consensus       176 ~s~v~~~~  183 (200)
                      ++.+.++.
T Consensus        80 d~~v~lWd   87 (611)
T 1nr0_A           80 HGNVRIWD   87 (611)
T ss_dssp             TSEEEEEE
T ss_pred             CCCEEEeE
Confidence            44455554

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.84  E-value=0.0072  Score=52.05  Aligned_cols=35  Identities=14%  Similarity=0.206  Sum_probs=30.0

Q ss_pred             eEECcCCCEEEEEE-----cCcEEEEECCCCCeEEEeeCC
Q psy7767         101 VQWSPVGHDLIFVK-----DNNLYQAYDDFRSINALTRDG  135 (200)
Q Consensus       101 ~~wSPDGk~IAFV~-----~gdLyv~~~~~g~~~rLT~dg  135 (200)
                      ..|+|+|++|+|+.     +..||.++++++..++|+...
T Consensus       109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~  148 (302)
T 3s25_A          109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY  148 (302)
T ss_dssp             EEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC
T ss_pred             cEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC
Confidence            37999999999997     348999999988888999764

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=96.81  E-value=0.0056  Score=53.94  Aligned_cols=72  Identities=17%  Similarity=0.147  Sum_probs=52.1

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCC----CeEEEeeCCCcceEecccccceeeeeeeCC-CcceEEcc--CCC
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFR----SINALTRDGIKGVLFNGVADWVYEEEVFSS-TKTLWFSP--DGS  167 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g----~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~-~~~~~WSP--DGk  167 (200)
                      ...+..++|||||+.||+..++.|.+.+++++    +..+......                  +. ...+.|||  ||+
T Consensus        18 ~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~------------------~~~v~~~~~sp~~~~~   79 (615)
T 1pgu_A           18 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHG------------------SSVVTTVKFSPIKGSQ   79 (615)
T ss_dssp             TTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTT------------------TSCEEEEEECSSTTCC
T ss_pred             cCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCC------------------CceEEEEEECcCCCCC
Confidence            46789999999999999999999999999876    3332222111                  12 35789999  999


Q ss_pred             EEEEEEEcCCcceEEEEE
Q psy7767         168 ILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       168 ~Laf~r~D~s~v~~~~i~  185 (200)
                      .|+.. ..++.+..+.+.
T Consensus        80 ~l~s~-~~dg~v~vw~~~   96 (615)
T 1pgu_A           80 YLCSG-DESGKVIVWGWT   96 (615)
T ss_dssp             EEEEE-ETTSEEEEEEEE
T ss_pred             EEEEe-cCCCEEEEEeCC
Confidence            88754 455667777664

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=96.79  E-value=0.018  Score=47.88  Aligned_cols=83  Identities=16%  Similarity=0.103  Sum_probs=52.4

Q ss_pred             cCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          92 LDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        92 lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      +.....+..++|||||..|+-..++.+.+.+++.+............. ..+.         -.....+.|||||++|+ 
T Consensus       234 ~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~-~~~~---------~~~v~~~~~spdg~~l~-  302 (319)
T 3frx_A          234 LSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGY-SKAA---------EPHAVSLAWSADGQTLF-  302 (319)
T ss_dssp             EECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTC-CGGG---------CCCEEEEEECTTSSEEE-
T ss_pred             ecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCcccccc-ccCc---------CcceeEEEECCCCCEEE-
Confidence            334567889999999999999988888888776544332221110000 0000         01234689999999886 


Q ss_pred             EEEcCCcceEEEEE
Q psy7767         172 MKFNDARVHNMSYI  185 (200)
Q Consensus       172 ~r~D~s~v~~~~i~  185 (200)
                      ....++.+..+.+.
T Consensus       303 sg~~Dg~i~vWd~~  316 (319)
T 3frx_A          303 AGYTDNVIRVWQVM  316 (319)
T ss_dssp             EEETTSCEEEEEEE
T ss_pred             EeecCceEEEEEEe
Confidence            44566778877764

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=96.78  E-value=0.023  Score=45.67  Aligned_cols=70  Identities=14%  Similarity=0.031  Sum_probs=49.7

Q ss_pred             CCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....+..++|+|||+.|+... ++.|++.++.+++..++....                   +....+.|||||+.|+..
T Consensus       223 ~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~  283 (337)
T 1gxr_A          223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHE-------------------SCVLSLKFAYCGKWFVST  283 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCS-------------------SCEEEEEECTTSSEEEEE
T ss_pred             CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCc-------------------cceeEEEECCCCCEEEEe
Confidence            356688999999999999886 578999999877765544321                   133578999999987644


Q ss_pred             EEcCCcceEEE
Q psy7767         173 KFNDARVHNMS  183 (200)
Q Consensus       173 r~D~s~v~~~~  183 (200)
                       ..++.+..+.
T Consensus       284 -~~dg~i~~~~  293 (337)
T 1gxr_A          284 -GKDNLLNAWR  293 (337)
T ss_dssp             -ETTSEEEEEE
T ss_pred             -cCCCcEEEEE
Confidence             4445454443

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=96.72  E-value=0.029  Score=46.94  Aligned_cols=70  Identities=19%  Similarity=0.192  Sum_probs=48.8

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      +..+..++|||||+.||... ++.|.+.++.+++..+......                  .....+.|||||+.|+.. 
T Consensus       164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~------------------~~v~~l~~spd~~~l~s~-  224 (321)
T 3ow8_A          164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA------------------MPIRSLTFSPDSQLLVTA-  224 (321)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCCCEEEECTTSCEEEEE-
T ss_pred             CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccC------------------CceeEEEEcCCCCEEEEE-
Confidence            45678999999999998875 5689999998776543332111                  134578999999987644 


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      ..++.+..+.
T Consensus       225 s~dg~i~iwd  234 (321)
T 3ow8_A          225 SDDGYIKIYD  234 (321)
T ss_dssp             CTTSCEEEEE
T ss_pred             cCCCeEEEEE
Confidence            4455555554

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=96.71  E-value=0.041  Score=44.60  Aligned_cols=74  Identities=11%  Similarity=-0.024  Sum_probs=52.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|||+.|+... ++.|.+.++.+++..+....+.                   ....+.|+|||+.|+...
T Consensus        74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~l~~~~  134 (369)
T 3zwl_B           74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPV-------------------PVKRVEFSPCGNYFLAIL  134 (369)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS-------------------CEEEEEECTTSSEEEEEE
T ss_pred             CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCC-------------------CeEEEEEccCCCEEEEec
Confidence            46789999999999998875 5679999998877655444221                   234689999999887654


Q ss_pred             Ec----CCcceEEEEEee
Q psy7767         174 FN----DARVHNMSYIHY  187 (200)
Q Consensus       174 ~D----~s~v~~~~i~~~  187 (200)
                      .+    ++.+..+.+...
T Consensus       135 ~~~~~~~g~i~~~d~~~~  152 (369)
T 3zwl_B          135 DNVMKNPGSINIYEIERD  152 (369)
T ss_dssp             CCBTTBCCEEEEEEEEEC
T ss_pred             CCccCCCCEEEEEEecCC
Confidence            43    155555555443

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=96.71  E-value=0.0054  Score=52.04  Aligned_cols=70  Identities=7%  Similarity=-0.020  Sum_probs=48.1

Q ss_pred             CCCCceeeEECcCCCEEEEEE---------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK---------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~---------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      ....+..++|+|||+.|+...         ++.|++.++.+++.......+                   +....+.|+|
T Consensus       252 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~-------------------~~~~~~~~~~  312 (433)
T 3bws_A          252 KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP-------------------GNKRHIVSGN  312 (433)
T ss_dssp             CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-------------------ECEEEEEECS
T ss_pred             CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC-------------------CCcceEEECC
Confidence            345578899999999998886         458999998877654443211                   1234678999


Q ss_pred             CCCEEEEEEEcCCcceEE
Q psy7767         165 DGSILAYMKFNDARVHNM  182 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~~~  182 (200)
                      ||+.|++....++.+..+
T Consensus       313 ~g~~l~~~~~~~~~v~v~  330 (433)
T 3bws_A          313 TENKIYVSDMCCSKIEVY  330 (433)
T ss_dssp             STTEEEEEETTTTEEEEE
T ss_pred             CCCEEEEEecCCCEEEEE
Confidence            999887765555444433

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=96.68  E-value=0.016  Score=49.37  Aligned_cols=77  Identities=19%  Similarity=0.223  Sum_probs=52.5

Q ss_pred             ecCCCCCceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          91 DLDGSNFLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        91 ~lt~~~~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      .+..+..+..+.|+|+|+.|+.+.   ++.|.+.++.++....+.. .+.                 -+....+.|||||
T Consensus       299 ~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h-----------------~~~v~~~~~s~dg  361 (401)
T 4aez_A          299 TVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH-----------------DTRVLYSALSPDG  361 (401)
T ss_dssp             EEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC-----------------SSCCCEEEECTTS
T ss_pred             EEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC-----------------CCCEEEEEECCCC
Confidence            333456789999999999999986   6789998887765443322 111                 0245678999999


Q ss_pred             CEEEEEEEcCCcceEEEEE
Q psy7767         167 SILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       167 k~Laf~r~D~s~v~~~~i~  185 (200)
                      +.|+.. ..++.+..+.+.
T Consensus       362 ~~l~s~-~~dg~i~iw~~~  379 (401)
T 4aez_A          362 RILSTA-ASDENLKFWRVY  379 (401)
T ss_dssp             SEEEEE-CTTSEEEEEECC
T ss_pred             CEEEEE-eCCCcEEEEECC
Confidence            988654 455556666543

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=96.68  E-value=0.0062  Score=49.54  Aligned_cols=62  Identities=21%  Similarity=0.205  Sum_probs=46.0

Q ss_pred             CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      .+..++|||||+.|+-.. ++.|.+.++.+++..+......                  +....+.|||||+.|+....|
T Consensus       275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------------~~v~~~~~s~~g~~l~~~s~d  336 (368)
T 3mmy_A          275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLD------------------QPISACCFNHNGNIFAYASSY  336 (368)
T ss_dssp             CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS------------------SCEEEEEECTTSSCEEEEECC
T ss_pred             ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCC------------------CCceEEEECCCCCeEEEEecc
Confidence            588999999999988875 5789999998776543332111                  134578999999999987655


Q ss_pred             C
Q psy7767         176 D  176 (200)
Q Consensus       176 ~  176 (200)
                      +
T Consensus       337 ~  337 (368)
T 3mmy_A          337 D  337 (368)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=96.67  E-value=0.0069  Score=49.74  Aligned_cols=70  Identities=7%  Similarity=0.081  Sum_probs=49.5

Q ss_pred             CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCe---EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSI---NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~---~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ...+..++|+|||+.|+.. .++.|.+.++++++.   ..+....                   +....+.|+|||+.|+
T Consensus         8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~-------------------~~v~~~~~~~~~~~l~   68 (372)
T 1k8k_C            8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN-------------------GQVTGVDWAPDSNRIV   68 (372)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS-------------------SCEEEEEEETTTTEEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC-------------------CcccEEEEeCCCCEEE
Confidence            4678999999999999988 577899999887752   2222111                   1345789999999887


Q ss_pred             EEEEcCCcceEEEE
Q psy7767         171 YMKFNDARVHNMSY  184 (200)
Q Consensus       171 f~r~D~s~v~~~~i  184 (200)
                      .. ..++.+..+.+
T Consensus        69 ~~-~~dg~i~vwd~   81 (372)
T 1k8k_C           69 TC-GTDRNAYVWTL   81 (372)
T ss_dssp             EE-ETTSCEEEEEE
T ss_pred             EE-cCCCeEEEEEC
Confidence            54 45556666654

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=96.67  E-value=0.018  Score=46.95  Aligned_cols=56  Identities=7%  Similarity=0.057  Sum_probs=41.3

Q ss_pred             ceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          98 LQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+.|||||+.+++..   ++.|++.+.++++..+... .+.                   ...++.|||||++|+..
T Consensus       143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------------------~~~~~~~s~dg~~l~~~  202 (353)
T 3vgz_A          143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-------------------MSTGLALDSEGKRLYTT  202 (353)
T ss_dssp             EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT-------------------TCCCCEEETTTTEEEEE
T ss_pred             CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC-------------------ccceEEECCCCCEEEEE
Confidence            46789999999987776   3569999998777655443 221                   24568999999987654

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=96.63  E-value=0.034  Score=46.69  Aligned_cols=73  Identities=21%  Similarity=0.251  Sum_probs=47.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEE-EeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINA-LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~r-LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|+|||+.|+-.. ++.|.+.+++.+.... +..       ..+..         .....+.|+|||+.|+-.
T Consensus       105 ~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-------~~~h~---------~~v~~~~~~p~~~~l~s~  168 (345)
T 3fm0_A          105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV-------LNSHT---------QDVKHVVWHPSQELLASA  168 (345)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE-------ECCCC---------SCEEEEEECSSSSCEEEE
T ss_pred             CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE-------ecCcC---------CCeEEEEECCCCCEEEEE
Confidence            45789999999999998875 5688888887654322 211       00100         123468899999988654


Q ss_pred             EEcCCcceEEEE
Q psy7767         173 KFNDARVHNMSY  184 (200)
Q Consensus       173 r~D~s~v~~~~i  184 (200)
                       ..++.+..+.+
T Consensus       169 -s~d~~i~~w~~  179 (345)
T 3fm0_A          169 -SYDDTVKLYRE  179 (345)
T ss_dssp             -ETTSCEEEEEE
T ss_pred             -eCCCcEEEEEe
Confidence             44455665543

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=96.62  E-value=0.053  Score=43.77  Aligned_cols=86  Identities=16%  Similarity=0.125  Sum_probs=54.7

Q ss_pred             eecCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          90 SDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        90 ~~lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ..+.....+..+.|+|++..++-..++.|.+.+++++....-...........+.+         +....+.|||||++|
T Consensus       251 ~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~---------~~v~~l~~s~dg~~l  321 (340)
T 4aow_A          251 YTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEP---------PQCTSLAWSADGQTL  321 (340)
T ss_dssp             EEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCC---------CCEEEEEECTTSSEE
T ss_pred             eeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCC---------CCEEEEEECCCCCEE
Confidence            33434567889999999999988889999999988765433222111000011111         133578999999987


Q ss_pred             EEEEEcCCcceEEEEE
Q psy7767         170 AYMKFNDARVHNMSYI  185 (200)
Q Consensus       170 af~r~D~s~v~~~~i~  185 (200)
                      + ....++.+.++.+.
T Consensus       322 ~-sgs~Dg~v~iW~~~  336 (340)
T 4aow_A          322 F-AGYTDNLVRVWQVT  336 (340)
T ss_dssp             E-EEETTSCEEEEEEE
T ss_pred             E-EEeCCCEEEEEeCC
Confidence            5 55666778777654

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=96.61  E-value=0.014  Score=46.81  Aligned_cols=67  Identities=25%  Similarity=0.272  Sum_probs=46.5

Q ss_pred             ceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767          98 LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA  177 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s  177 (200)
                      ..-++|||++ .||.-.++.|.+.++++|+..++-......                .....+.|||||+.|+- ...++
T Consensus        28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~----------------~~V~~v~~~~~~~~l~s-gs~Dg   89 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPG----------------EYISSVAWIKEGNYLAV-GTSSA   89 (318)
T ss_dssp             CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTT----------------CCEEEEEECTTSSEEEE-EETTS
T ss_pred             ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCC----------------CeEEEEEECCCCCEEEE-EECCC
Confidence            3568999997 888888999999999988876554321100                12357899999998864 44455


Q ss_pred             cceEE
Q psy7767         178 RVHNM  182 (200)
Q Consensus       178 ~v~~~  182 (200)
                      .+..+
T Consensus        90 ~v~iw   94 (318)
T 4ggc_A           90 EVQLW   94 (318)
T ss_dssp             EEEEE
T ss_pred             cEEEe
Confidence            55544

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=96.58  E-value=0.0088  Score=52.74  Aligned_cols=69  Identities=26%  Similarity=0.284  Sum_probs=46.0

Q ss_pred             CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.||-... +.|.+.+..+.....+....                   +....+.|||||++||-. 
T Consensus        16 ~~~V~~~a~spdg~~las~~~d~~v~iWd~~~~~~~~l~gh~-------------------~~V~~l~fspdg~~las~-   75 (577)
T 2ymu_A           16 SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS-------------------SSVWGVAFSPDGQTIASA-   75 (577)
T ss_dssp             SSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCS-------------------SCEEEEEECTTSSEEEEE-
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEEEEeCCC-------------------CCEEEEEECCCCCEEEEE-
Confidence            567899999999999998764 56888886433333333211                   123468999999988754 


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      ..++.+.++.
T Consensus        76 ~~d~~i~vWd   85 (577)
T 2ymu_A           76 SDDKTVKLWN   85 (577)
T ss_dssp             ETTSCEEEEE
T ss_pred             eCCCEEEEEE
Confidence            4445555553

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=96.56  E-value=0.056  Score=43.76  Aligned_cols=73  Identities=14%  Similarity=0.056  Sum_probs=48.7

Q ss_pred             CCCCceeeEECcCCCEEEEEEcC---------------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVKDN---------------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTK  158 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~~g---------------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~  158 (200)
                      ....+..+.|+|+|+.++.....               .+.+.++..++.........                  +...
T Consensus       258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------------------~~v~  319 (369)
T 3zwl_B          258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF------------------GPLN  319 (369)
T ss_dssp             CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS------------------SCEE
T ss_pred             CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc------------------CcEE
Confidence            45678899999999999998643               35666665554433322111                  1345


Q ss_pred             ceEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767         159 TLWFSPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       159 ~~~WSPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      .+.|||||+.|+- ...++.+..+.+.
T Consensus       320 ~~~~s~~~~~l~s-~~~dg~v~iw~~~  345 (369)
T 3zwl_B          320 TVAISPQGTSYAS-GGEDGFIRLHHFE  345 (369)
T ss_dssp             EEEECTTSSEEEE-EETTSEEEEEEEC
T ss_pred             EEEECCCCCEEEE-EcCCCeEEEEECc
Confidence            6899999998764 4556677777664

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=96.53  E-value=0.023  Score=49.64  Aligned_cols=73  Identities=10%  Similarity=-0.034  Sum_probs=44.0

Q ss_pred             eeecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeEEEeeCC-CcceEecccccceeeeeeeCC
Q psy7767          89 VSDLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSINALTRDG-IKGVLFNGVADWVYEEEVFSS  156 (200)
Q Consensus        89 v~~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~rLT~dg-~~~~~~nG~pdwv~eEEi~~~  156 (200)
                      +..+..+... .+.+||||+++....           ++.|.+.+..+.+...-..-+ .... ..|           ..
T Consensus        60 ~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~-~~g-----------~~  126 (373)
T 2mad_H           60 LGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRF-DVG-----------PY  126 (373)
T ss_pred             EEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccc-ccC-----------CC
Confidence            3444444444 999999999987664           235778888766554322222 1100 000           13


Q ss_pred             CcceEEccCCCEEEEEEE
Q psy7767         157 TKTLWFSPDGSILAYMKF  174 (200)
Q Consensus       157 ~~~~~WSPDGk~Laf~r~  174 (200)
                      ..++.|||||++|+....
T Consensus       127 p~~~~~spDG~~l~v~n~  144 (373)
T 2mad_H          127 SWMNANTPNNADLLFFQF  144 (373)
T ss_pred             ccceEECCCCCEEEEEec
Confidence            457899999999876643

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=96.52  E-value=0.0097  Score=51.72  Aligned_cols=31  Identities=16%  Similarity=-0.048  Sum_probs=26.8

Q ss_pred             CceeeEECcCCCEEEEEEcCcEEEEECCCCC
Q psy7767          97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFRS  127 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~  127 (200)
                      .+..++|||||+.|+...++.|++.++.+|+
T Consensus         6 p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~   36 (450)
T 2vdu_B            6 PLQNLLTSRDGSLVFAIIKNCILSFKYQSPN   36 (450)
T ss_dssp             CCCEEEECSSSSEEEEEETTEEEEEEEETTT
T ss_pred             cEEEEEecCCCCEEEEEeCCeEEEEECCCCC
Confidence            4677889999998887888999999988887

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=96.47  E-value=0.041  Score=45.98  Aligned_cols=72  Identities=13%  Similarity=0.090  Sum_probs=50.6

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|||+.|+-.. ++.|.+.++.+++..+.-....                  +...++.|||||+.|+ ..
T Consensus       248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~------------------~~v~~v~~s~~g~~l~-s~  308 (321)
T 3ow8_A          248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ------------------DQVWGVKYNGNGSKIV-SV  308 (321)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCEEEEEECTTSSEEE-EE
T ss_pred             CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCC------------------CcEEEEEECCCCCEEE-EE
Confidence            45678999999999988775 5679999988766543322111                  1234789999999886 55


Q ss_pred             EcCCcceEEEEE
Q psy7767         174 FNDARVHNMSYI  185 (200)
Q Consensus       174 ~D~s~v~~~~i~  185 (200)
                      .+++.+..+..|
T Consensus       309 ~~d~~i~vwd~p  320 (321)
T 3ow8_A          309 GDDQEIHIYDCP  320 (321)
T ss_dssp             ETTCCEEEEECC
T ss_pred             eCCCeEEEEeCC
Confidence            666777777643

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=96.45  E-value=0.027  Score=48.04  Aligned_cols=73  Identities=15%  Similarity=0.036  Sum_probs=50.8

Q ss_pred             CCCceeeEECcCCCE-EEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHD-LIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~-IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|||||.. ||-.. ++.|.+.++.+++..++.  +-.                 +...++.|||||++|+..
T Consensus       257 ~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~--~H~-----------------~~V~~v~~sp~~~~llas  317 (344)
T 4gqb_B          257 SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQ--AHR-----------------DFVRDATWSPLNHSLLTT  317 (344)
T ss_dssp             SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEEC--CCS-----------------SCEEEEEECSSSTTEEEE
T ss_pred             CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEc--CCC-----------------CCEEEEEEeCCCCeEEEE
Confidence            466889999999965 54443 578999998877654432  210                 123578999999988777


Q ss_pred             EEcCCcceEEEEEe
Q psy7767         173 KFNDARVHNMSYIH  186 (200)
Q Consensus       173 r~D~s~v~~~~i~~  186 (200)
                      ...++.+..+.++.
T Consensus       318 ~s~D~~v~~w~v~~  331 (344)
T 4gqb_B          318 VGWDHQVVHHVVPT  331 (344)
T ss_dssp             EETTSCEEEEECCC
T ss_pred             EcCCCeEEEEECCC
Confidence            77777777776654

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=96.43  E-value=0.025  Score=48.67  Aligned_cols=68  Identities=25%  Similarity=0.263  Sum_probs=48.1

Q ss_pred             ceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767          98 LQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA  177 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s  177 (200)
                      ..-+.||++ +.||...++.|++.++.+|+..++.......                .....+.|||||++||-. ..++
T Consensus       108 ~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~----------------~~V~sv~fspdg~~lasg-s~Dg  169 (420)
T 4gga_A          108 LNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPG----------------EYISSVAWIKEGNYLAVG-TSSA  169 (420)
T ss_dssp             CBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTT----------------CCEEEEEECTTSSEEEEE-ETTS
T ss_pred             ceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCC----------------CcEEEEEECCCCCEEEEE-ECCC
Confidence            466899986 5888888999999999999877665422100                123578999999988744 4455


Q ss_pred             cceEEE
Q psy7767         178 RVHNMS  183 (200)
Q Consensus       178 ~v~~~~  183 (200)
                      .+.++.
T Consensus       170 ~v~iWd  175 (420)
T 4gga_A          170 EVQLWD  175 (420)
T ss_dssp             CEEEEE
T ss_pred             eEEEEE
Confidence            565553

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=96.41  E-value=0.02  Score=48.49  Aligned_cols=74  Identities=16%  Similarity=0.173  Sum_probs=52.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCc-EEEEECCCCCeEEEeeCC-CcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNN-LYQAYDDFRSINALTRDG-IKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gd-Lyv~~~~~g~~~rLT~dg-~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ...+..++|||||+.||-.. ++. |.+.++.+++..+....| ..                 +....+.|||||+.|+-
T Consensus       195 ~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~-----------------~~v~~~~~s~~~~~l~s  257 (355)
T 3vu4_A          195 TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDR-----------------ADVVDMKWSTDGSKLAV  257 (355)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCC-----------------SCEEEEEECTTSCEEEE
T ss_pred             CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCC-----------------CcEEEEEECCCCCEEEE
Confidence            56789999999999998876 456 999999887765433322 10                 13357899999998875


Q ss_pred             EEEcCCcceEEEEEe
Q psy7767         172 MKFNDARVHNMSYIH  186 (200)
Q Consensus       172 ~r~D~s~v~~~~i~~  186 (200)
                      . .+++.+..+.+..
T Consensus       258 ~-s~d~~v~iw~~~~  271 (355)
T 3vu4_A          258 V-SDKWTLHVFEIFN  271 (355)
T ss_dssp             E-ETTCEEEEEESSC
T ss_pred             E-ECCCEEEEEEccC
Confidence            4 5556677776543

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=96.38  E-value=0.048  Score=43.59  Aligned_cols=72  Identities=22%  Similarity=0.176  Sum_probs=51.1

Q ss_pred             CCCCceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ....+....|+|+++.++...   ++.|.+.++.+++..+....-.                  +....+.|||||+.|+
T Consensus       239 ~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~------------------~~V~~l~~spdg~~l~  300 (318)
T 4ggc_A          239 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT------------------SRVLSLTMSPDGATVA  300 (318)
T ss_dssp             CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS------------------SCEEEEEECTTSSCEE
T ss_pred             ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCC------------------CCEEEEEEcCCCCEEE
Confidence            356678899999999998886   4689999998776654332111                  1235789999999886


Q ss_pred             EEEEcCCcceEEEE
Q psy7767         171 YMKFNDARVHNMSY  184 (200)
Q Consensus       171 f~r~D~s~v~~~~i  184 (200)
                       ....++.+.++.+
T Consensus       301 -S~s~D~~v~iWd~  313 (318)
T 4ggc_A          301 -SAAADETLRLWRC  313 (318)
T ss_dssp             -EEETTTEEEEECC
T ss_pred             -EEecCCeEEEEEC
Confidence             4556666776653

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=96.36  E-value=0.0078  Score=57.32  Aligned_cols=74  Identities=12%  Similarity=0.141  Sum_probs=48.3

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+...+|||||+.||-.. ++.|.+.+.++ ....+.  ....+ .         +   ....++.|||||+.|| +.
T Consensus        85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~--~~~~~-~---------~---~sv~svafSPDG~~LA-sg  147 (588)
T 2j04_A           85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD--SKGNL-S---------S---RTYHCFEWNPIESSIV-VG  147 (588)
T ss_dssp             SCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC--CSSCS-T---------T---TCEEEEEECSSSSCEE-EE
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc--CCCcc-c---------c---ccEEEEEEcCCCCEEE-EE
Confidence            46689999999999999875 56888887543 222222  11000 0         0   1245789999999886 55


Q ss_pred             EcCCcceEEEEE
Q psy7767         174 FNDARVHNMSYI  185 (200)
Q Consensus       174 ~D~s~v~~~~i~  185 (200)
                      .+++.+.++.+.
T Consensus       148 s~DGtVkIWd~~  159 (588)
T 2j04_A          148 NEDGELQFFSIR  159 (588)
T ss_dssp             ETTSEEEEEECC
T ss_pred             cCCCEEEEEECC
Confidence            667777777643

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=96.34  E-value=0.032  Score=45.37  Aligned_cols=70  Identities=14%  Similarity=0.067  Sum_probs=48.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|||+.|+... ++.|.+.++.+++..+......                  .....+.|+|||+.|+.. 
T Consensus        23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~~l~s~-   83 (312)
T 4ery_A           23 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK------------------LGISDVAWSSDSNLLVSA-   83 (312)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS------------------SCEEEEEECTTSSEEEEE-
T ss_pred             CCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCC------------------CceEEEEEcCCCCEEEEE-
Confidence            46789999999999998875 5688888888776654433221                  123468999999988654 


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      ..++.+..+.
T Consensus        84 ~~d~~i~vwd   93 (312)
T 4ery_A           84 SDDKTLKIWD   93 (312)
T ss_dssp             ETTSEEEEEE
T ss_pred             CCCCEEEEEE
Confidence            4445555443

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=96.33  E-value=0.023  Score=48.61  Aligned_cols=85  Identities=19%  Similarity=0.099  Sum_probs=48.7

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeee---CCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVF---SSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~---~~~~~~~WSPDGk~Laf  171 (200)
                      ...+..++|||||+.||...++.+.+.++.++............   ...+.-.......   .....+.|||||+.|+.
T Consensus        64 ~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s  140 (393)
T 1erj_A           64 TSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAA---NKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  140 (393)
T ss_dssp             SSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC--------------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCcccc---ccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence            45678999999999999988888888888877654332211100   0000000000000   01347899999998875


Q ss_pred             EEEcCCcceEEE
Q psy7767         172 MKFNDARVHNMS  183 (200)
Q Consensus       172 ~r~D~s~v~~~~  183 (200)
                      . ..++.+.++.
T Consensus       141 ~-~~d~~i~iwd  151 (393)
T 1erj_A          141 G-AEDRLIRIWD  151 (393)
T ss_dssp             E-ETTSCEEEEE
T ss_pred             E-cCCCeEEEEE
Confidence            4 4445555543

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=96.24  E-value=0.043  Score=47.15  Aligned_cols=73  Identities=23%  Similarity=0.207  Sum_probs=51.9

Q ss_pred             CCCCceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ....+....|+|+++.++...   ++.|.+.++.+++..+.-. |-.                 +....+.|||||++|+
T Consensus       319 ~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~-gH~-----------------~~V~~l~~spdg~~l~  380 (420)
T 4gga_A          319 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-GHT-----------------SRVLSLTMSPDGATVA  380 (420)
T ss_dssp             CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-CCS-----------------SCEEEEEECTTSSCEE
T ss_pred             cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc-CCC-----------------CCEEEEEEcCCCCEEE
Confidence            456778899999999999886   4689999998776543222 210                 1335789999999886


Q ss_pred             EEEEcCCcceEEEEE
Q psy7767         171 YMKFNDARVHNMSYI  185 (200)
Q Consensus       171 f~r~D~s~v~~~~i~  185 (200)
                       ....++.+..+.+.
T Consensus       381 -S~s~D~tvriWdv~  394 (420)
T 4gga_A          381 -SAAADETLRLWRCF  394 (420)
T ss_dssp             -EEETTTEEEEECCS
T ss_pred             -EEecCCeEEEEECC
Confidence             44556667777653

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=96.23  E-value=0.065  Score=45.59  Aligned_cols=72  Identities=17%  Similarity=0.197  Sum_probs=51.7

Q ss_pred             CCCceeeEECcCCCEEEEEE----cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK----DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~----~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ...+..++|+|+|..++.+.    ++.|.+.++.+++..+....+.                   ....+.|||||+.|+
T Consensus       259 ~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~-------------------~v~~~~~s~~~~~l~  319 (401)
T 4aez_A          259 NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS-------------------QVTSLIWSPHSKEIM  319 (401)
T ss_dssp             SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS-------------------CEEEEEECSSSSEEE
T ss_pred             cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC-------------------cEEEEEECCCCCeEE
Confidence            46679999999998877774    5789999998877654443221                   245789999999887


Q ss_pred             EEEE-cCCcceEEEEE
Q psy7767         171 YMKF-NDARVHNMSYI  185 (200)
Q Consensus       171 f~r~-D~s~v~~~~i~  185 (200)
                      .... +++.+..+.+.
T Consensus       320 ~~~g~~dg~i~v~~~~  335 (401)
T 4aez_A          320 STHGFPDNNLSIWSYS  335 (401)
T ss_dssp             EEECTTTCEEEEEEEE
T ss_pred             EEeecCCCcEEEEecC
Confidence            7643 45666666544

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=96.23  E-value=0.019  Score=52.84  Aligned_cols=69  Identities=7%  Similarity=-0.026  Sum_probs=48.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.||... +|.|.+.++.++...+......                  +....+.|||||+.|+.. 
T Consensus        13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~l~~~-   73 (814)
T 3mkq_A           13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTE------------------TPVRAGKFIARKNWIIVG-   73 (814)
T ss_dssp             CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS------------------SCEEEEEEEGGGTEEEEE-
T ss_pred             CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCC------------------CcEEEEEEeCCCCEEEEE-
Confidence            46789999999999999987 5689999988776543322111                  134578999999998865 


Q ss_pred             EcCCcceEE
Q psy7767         174 FNDARVHNM  182 (200)
Q Consensus       174 ~D~s~v~~~  182 (200)
                      .+++.+..+
T Consensus        74 ~~dg~i~vw   82 (814)
T 3mkq_A           74 SDDFRIRVF   82 (814)
T ss_dssp             ETTSEEEEE
T ss_pred             eCCCeEEEE
Confidence            344444444

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.22  E-value=0.015  Score=49.98  Aligned_cols=86  Identities=12%  Similarity=0.120  Sum_probs=52.0

Q ss_pred             eEECcCCCEEEEEEc--CcEEEEECCCCCeEEEeeCCCcceEe-ccccccee------------------eeeeeCCCcc
Q psy7767         101 VQWSPVGHDLIFVKD--NNLYQAYDDFRSINALTRDGIKGVLF-NGVADWVY------------------EEEVFSSTKT  159 (200)
Q Consensus       101 ~~wSPDGk~IAFV~~--gdLyv~~~~~g~~~rLT~dg~~~~~~-nG~pdwv~------------------eEEi~~~~~~  159 (200)
                      +.++|+|++|.|+..  ..||+++++++..++|+..+....+. .|  .|++                  ++.++.....
T Consensus       150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~~~~~P~g--~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~  227 (302)
T 3s25_A          150 FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDD--TNVYYMDVNRDNAIVHVNINNPNPVVLTEANI  227 (302)
T ss_dssp             CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSCEEEEEEEET--TEEEEEEGGGTTEEEEECSSSCCCEECSCSCE
T ss_pred             eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCCccceeeecC--CEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc
Confidence            457899999999975  58999999988888886532211000 11  1111                  0112333455


Q ss_pred             eEEccCCCEEEEEEEcCCcceEEEEEeeCC
Q psy7767         160 LWFSPDGSILAYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       160 ~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~  189 (200)
                      +||+|+|++|.|.. +.....++.+...+.
T Consensus       228 ~~~~~~g~~Iy~~~-~~~~~~i~~~~~DG~  256 (302)
T 3s25_A          228 EHYNVYGSLIFYQR-GGDNPALCVVKNDGT  256 (302)
T ss_dssp             EEEEEETTEEEEEE-CSSSCEEEEEETTSC
T ss_pred             ceEEECCCEEEEEE-CCCCcEEEEEECCCC
Confidence            89999999996653 433445555555444

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=96.17  E-value=0.051  Score=47.79  Aligned_cols=69  Identities=26%  Similarity=0.315  Sum_probs=46.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.||-.. ++.|.+.+..+.....+....                   +....+.|||||++|+- .
T Consensus       467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~-------------------~~v~~l~~s~dg~~l~s-~  526 (577)
T 2ymu_A          467 SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHS-------------------SSVRGVAFSPDGQTIAS-A  526 (577)
T ss_dssp             SSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCS-------------------SCEEEEEECTTSSCEEE-E
T ss_pred             CCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCC-------------------CCEEEEEEcCCCCEEEE-E
Confidence            46678999999999998875 457888886543333333211                   12356899999998864 4


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      .+++.+..+.
T Consensus       527 ~~dg~v~lwd  536 (577)
T 2ymu_A          527 SDDKTVKLWN  536 (577)
T ss_dssp             ETTSEEEEEC
T ss_pred             ECcCEEEEEe
Confidence            5555565553

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=96.07  E-value=0.042  Score=46.13  Aligned_cols=72  Identities=22%  Similarity=0.343  Sum_probs=47.3

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|||||+.||-.. ++.+.+.++..+....+.. .+-.                 +....+.|||||+.|+-.
T Consensus        61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~-----------------~~v~~v~~sp~~~~l~s~  123 (345)
T 3fm0_A           61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHE-----------------NEVKSVAWAPSGNLLATC  123 (345)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCS-----------------SCEEEEEECTTSSEEEEE
T ss_pred             CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCC-----------------CCceEEEEeCCCCEEEEE
Confidence            45689999999999998876 5678887776654332222 1110                 123578999999988754


Q ss_pred             EEcCCcceEEEE
Q psy7767         173 KFNDARVHNMSY  184 (200)
Q Consensus       173 r~D~s~v~~~~i  184 (200)
                       ..++.+..+.+
T Consensus       124 -s~D~~v~iwd~  134 (345)
T 3fm0_A          124 -SRDKSVWVWEV  134 (345)
T ss_dssp             -ETTSCEEEEEE
T ss_pred             -ECCCeEEEEEC
Confidence             44555666654

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=96.02  E-value=0.067  Score=44.41  Aligned_cols=81  Identities=20%  Similarity=0.130  Sum_probs=48.3

Q ss_pred             CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCC-cceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGI-KGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~-~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ...+..++|+|||+.|+....    +.|.+.++..++..+...... ......+.  +..    -+....+.|+|||+.|
T Consensus       233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~v~~~~~~~~~~~l  306 (397)
T 1sq9_A          233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGE--FAH----SSWVMSLSFNDSGETL  306 (397)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CC--BSB----SSCEEEEEECSSSSEE
T ss_pred             CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccc--ccc----CCcEEEEEECCCCCEE
Confidence            567899999999999988764    689999998776544332200 00000000  000    0133578999999987


Q ss_pred             EEEEEcCCcceEE
Q psy7767         170 AYMKFNDARVHNM  182 (200)
Q Consensus       170 af~r~D~s~v~~~  182 (200)
                      +.. ..++.+..+
T Consensus       307 ~~~-~~dg~i~iw  318 (397)
T 1sq9_A          307 CSA-GWDGKLRFW  318 (397)
T ss_dssp             EEE-ETTSEEEEE
T ss_pred             EEE-eCCCeEEEE
Confidence            654 444445444

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=96.00  E-value=0.031  Score=47.83  Aligned_cols=67  Identities=21%  Similarity=0.143  Sum_probs=46.6

Q ss_pred             CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      .+..++|||||+.||... ++.|.+.++++++..+......                  +....+.|+|||+.|+-. ..
T Consensus       125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~------------------~~v~~~~~~p~~~~l~s~-s~  185 (393)
T 1erj_A          125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE------------------QDIYSLDYFPSGDKLVSG-SG  185 (393)
T ss_dssp             BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCEEEEEECTTSSEEEEE-ET
T ss_pred             eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCC------------------CCEEEEEEcCCCCEEEEe-cC
Confidence            378999999999998875 5689999998776554433211                  123468999999988644 44


Q ss_pred             CCcceEE
Q psy7767         176 DARVHNM  182 (200)
Q Consensus       176 ~s~v~~~  182 (200)
                      ++.+..+
T Consensus       186 d~~v~iw  192 (393)
T 1erj_A          186 DRTVRIW  192 (393)
T ss_dssp             TSEEEEE
T ss_pred             CCcEEEE
Confidence            4555544

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=95.97  E-value=0.097  Score=43.61  Aligned_cols=75  Identities=12%  Similarity=0.024  Sum_probs=50.9

Q ss_pred             CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|+| ||+.|+... ++.|.+.++.+++.........                  +....+.|||||..+++.
T Consensus       262 ~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~~l~s  323 (416)
T 2pm9_A          262 QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG------------------NWCFKTKFAPEAPDLFAC  323 (416)
T ss_dssp             SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS------------------SCCCCEEECTTCTTEEEE
T ss_pred             cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC------------------CceEEEEECCCCCCEEEE
Confidence            45678999999 888888775 5789999988776543332211                  134578999999444445


Q ss_pred             EEcCCcceEEEEEee
Q psy7767         173 KFNDARVHNMSYIHY  187 (200)
Q Consensus       173 r~D~s~v~~~~i~~~  187 (200)
                      ...++.+..+.+...
T Consensus       324 ~~~d~~i~iw~~~~~  338 (416)
T 2pm9_A          324 ASFDNKIEVQTLQNL  338 (416)
T ss_dssp             CCSSSEEEEEESCCC
T ss_pred             EecCCcEEEEEccCC
Confidence            555666777665443

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=95.96  E-value=0.21  Score=41.35  Aligned_cols=89  Identities=9%  Similarity=-0.062  Sum_probs=51.7

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcce-----EecccccceeeeeeeCCCcceEEccCCC-
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGV-----LFNGVADWVYEEEVFSSTKTLWFSPDGS-  167 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~-----~~nG~pdwv~eEEi~~~~~~~~WSPDGk-  167 (200)
                      ...+..+.|+|||+.|+... ++.|.+.++..++..+.........     ..+|.. ...... -+....+.|+|||+ 
T Consensus       291 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~-~~~v~~~~~~~~g~~  368 (397)
T 1sq9_A          291 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE-HGDSLA-EPGVFDVKFLKKGWR  368 (397)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCT-TSCBCS-SCCEEEEEEECTTTS
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccc-cccccc-CCceeEEEecccccc
Confidence            45678999999999988876 5689999998776554333110000     000000 000000 01345789999994 


Q ss_pred             --------EEEEEEEcCCcceEEEEE
Q psy7767         168 --------ILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       168 --------~Laf~r~D~s~v~~~~i~  185 (200)
                              .+++....++.+..+.+.
T Consensus       369 ~~~~~~~~~~l~s~~~dg~i~iw~~~  394 (397)
T 1sq9_A          369 SGMGADLNESLCCVCLDRSIRWFREA  394 (397)
T ss_dssp             BSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred             ccccccccceEEEecCCCcEEEEEcC
Confidence                    344456667777777654

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=95.94  E-value=0.023  Score=48.09  Aligned_cols=72  Identities=11%  Similarity=-0.044  Sum_probs=43.9

Q ss_pred             ceeeE-ECcCCCEEEEEE-c-C-----cEEEEECC-CCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEcc---
Q psy7767          98 LQLVQ-WSPVGHDLIFVK-D-N-----NLYQAYDD-FRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSP---  164 (200)
Q Consensus        98 is~~~-wSPDGk~IAFV~-~-g-----dLyv~~~~-~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP---  164 (200)
                      ...++ |||||+.|+... + +     .|.+.+++ +|+..++.. .+.     .+           ....++.|||   
T Consensus       256 ~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-----~~-----------~~~~~~a~sp~~~  319 (365)
T 1jof_A          256 RADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-----PT-----------SGGHSNAVSPCPW  319 (365)
T ss_dssp             EEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-----SS-----------CCTTCCCEEECTT
T ss_pred             cccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-----CC-----------CCcccceecCCCc
Confidence            56788 999999985432 2 2     57777775 555544321 000     00           1234678999   


Q ss_pred             CCCEEEEEEEcCCcceEEEEE
Q psy7767         165 DGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~~~~i~  185 (200)
                      ||++|+....+...+.++.+.
T Consensus       320 dg~~l~v~~~~~~~v~v~~~~  340 (365)
T 1jof_A          320 SDEWMAITDDQEGWLEIYRWK  340 (365)
T ss_dssp             CTTEEEEECSSSCEEEEEEEE
T ss_pred             CCCEEEEEEcCCCeEEEEEEc
Confidence            899987665555667766553

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=95.91  E-value=0.037  Score=46.08  Aligned_cols=70  Identities=10%  Similarity=-0.069  Sum_probs=48.3

Q ss_pred             CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeE--EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSIN--ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~--rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ...+..++|+|||+.||-. .++.|.+.++.++...  .+.. +..                 +....+.|||||+.|+-
T Consensus       170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~-~h~-----------------~~v~~l~fs~~g~~l~s  231 (343)
T 3lrv_A          170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV-DEE-----------------AKIKEVKFADNGYWMVV  231 (343)
T ss_dssp             SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC-CTT-----------------SCEEEEEECTTSSEEEE
T ss_pred             CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec-cCC-----------------CCEEEEEEeCCCCEEEE
Confidence            3458899999999998874 5778999999877654  2322 010                 13457899999998876


Q ss_pred             EEEcCCcceEEEE
Q psy7767         172 MKFNDARVHNMSY  184 (200)
Q Consensus       172 ~r~D~s~v~~~~i  184 (200)
                      .. ++ .+..+.+
T Consensus       232 ~~-~~-~v~iwd~  242 (343)
T 3lrv_A          232 EC-DQ-TVVCFDL  242 (343)
T ss_dssp             EE-SS-BEEEEET
T ss_pred             Ee-CC-eEEEEEc
Confidence            55 44 5555543

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=95.90  E-value=0.045  Score=45.95  Aligned_cols=69  Identities=13%  Similarity=-0.007  Sum_probs=47.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|||+.|+... ++.|.+.++..++..+......                  +....+.|+|||+.|+.. 
T Consensus       139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~~l~s~-  199 (420)
T 3vl1_A          139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHR------------------ATVTDIAIIDRGRNVLSA-  199 (420)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCS------------------SCEEEEEEETTTTEEEEE-
T ss_pred             cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCC------------------CcEEEEEEcCCCCEEEEE-
Confidence            56789999999999988776 4689999998765433222111                  123568999999988754 


Q ss_pred             EcCCcceEE
Q psy7767         174 FNDARVHNM  182 (200)
Q Consensus       174 ~D~s~v~~~  182 (200)
                      ..++.+..+
T Consensus       200 ~~d~~v~iw  208 (420)
T 3vl1_A          200 SLDGTIRLW  208 (420)
T ss_dssp             ETTSCEEEE
T ss_pred             cCCCcEEEe
Confidence            444445544

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=95.85  E-value=0.11  Score=45.01  Aligned_cols=75  Identities=11%  Similarity=0.072  Sum_probs=48.1

Q ss_pred             CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEE-EeeCCCcceEecccccceeeeeeeCCCcceEEccC---CCEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINA-LTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD---GSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~r-LT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD---Gk~L  169 (200)
                      ...+..++|+|||+.|+.... +.|++.++.++.... ....      ..|.         .+....+.||||   |+.|
T Consensus       149 ~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~------~~~h---------~~~v~~~~~sp~~~~~~~l  213 (450)
T 2vdu_B          149 SKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEP------ILGH---------VSMLTDVHLIKDSDGHQFI  213 (450)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCC------SEEC---------SSCEEEEEEEECTTSCEEE
T ss_pred             CCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccccee------eecc---------cCceEEEEEcCCCCCCcEE
Confidence            456889999999999988864 789999887654321 0000      0010         013456899999   8766


Q ss_pred             EEEEEcCCcceEEEEE
Q psy7767         170 AYMKFNDARVHNMSYI  185 (200)
Q Consensus       170 af~r~D~s~v~~~~i~  185 (200)
                      +. ...++.+..+.+.
T Consensus       214 ~s-~~~d~~i~vwd~~  228 (450)
T 2vdu_B          214 IT-SDRDEHIKISHYP  228 (450)
T ss_dssp             EE-EETTSCEEEEEES
T ss_pred             EE-EcCCCcEEEEECC
Confidence            54 4555667766653

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=95.83  E-value=0.073  Score=44.25  Aligned_cols=77  Identities=9%  Similarity=-0.069  Sum_probs=50.0

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ...+..++|||||+.|+-..++.|.+.++..+...+....-.      +       ++.--....+.|+|||++|+-...
T Consensus       214 ~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~------~-------~~~~~~~~~~~~~~~g~~l~~~s~  280 (343)
T 3lrv_A          214 EAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYT------I-------PEFKTGTVTYDIDDSGKNMIAYSN  280 (343)
T ss_dssp             TSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCB------C------------CCEEEEECTTSSEEEEEET
T ss_pred             CCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccc------c-------ccccccceEEEECCCCCEEEEecC
Confidence            467899999999999999998899999988664322111000      0       000001135899999999876544


Q ss_pred             cCCcceEEEE
Q psy7767         175 NDARVHNMSY  184 (200)
Q Consensus       175 D~s~v~~~~i  184 (200)
                      .++.+..+.+
T Consensus       281 ~d~~i~v~~~  290 (343)
T 3lrv_A          281 ESNSLTIYKF  290 (343)
T ss_dssp             TTTEEEEEEE
T ss_pred             CCCcEEEEEE
Confidence            3566666654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=95.82  E-value=0.12  Score=43.72  Aligned_cols=74  Identities=18%  Similarity=0.085  Sum_probs=49.0

Q ss_pred             CCCceeeEECcCCCE-EEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc-CCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHD-LIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP-DGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~-IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP-DGk~Laf  171 (200)
                      ...+..++|||||+. ||-.. ++.|.+.++++++..+.....                   +...++.||| ||+.|+ 
T Consensus       269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~-------------------~~V~~vafsP~d~~~l~-  328 (357)
T 4g56_B          269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHR-------------------DFVTGVAWSPLDHSKFT-  328 (357)
T ss_dssp             SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCS-------------------SCEEEEEECSSSTTEEE-
T ss_pred             ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCC-------------------CCEEEEEEeCCCCCEEE-
Confidence            466889999999865 54443 578999998877655433211                   1235789999 788776 


Q ss_pred             EEEcCCcceEEEEEeeC
Q psy7767         172 MKFNDARVHNMSYIHYG  188 (200)
Q Consensus       172 ~r~D~s~v~~~~i~~~~  188 (200)
                      ....++.+..+.++..+
T Consensus       329 s~s~Dg~v~iW~~~~~~  345 (357)
T 4g56_B          329 TVGWDHKVLHHHLPSEG  345 (357)
T ss_dssp             EEETTSCEEEEECC---
T ss_pred             EEcCCCeEEEEECCCCC
Confidence            45666778888775543

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=95.80  E-value=0.061  Score=46.98  Aligned_cols=64  Identities=11%  Similarity=0.123  Sum_probs=41.2

Q ss_pred             ceeeEECcCCCEEEEEEc-----------CcEEEEECCCCCe-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767          98 LQLVQWSPVGHDLIFVKD-----------NNLYQAYDDFRSI-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD  165 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~-----------gdLyv~~~~~g~~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD  165 (200)
                      .+.+.++|||+++.....           ++|++.|+.+++. .+|. .|.                   ...++.||||
T Consensus       269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~-------------------~p~~i~~s~D  328 (373)
T 2mad_H          269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGH-------------------DVDAISVAQD  328 (373)
T ss_pred             eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCC-------------------CcCeEEECCC
Confidence            344678898887644332           4699998887765 3443 221                   3567899999


Q ss_pred             CCEEEEEEE-cCCcceE
Q psy7767         166 GSILAYMKF-NDARVHN  181 (200)
Q Consensus       166 Gk~Laf~r~-D~s~v~~  181 (200)
                      |++++|+.. .++.+..
T Consensus       329 g~~~l~v~~~~~~~V~V  345 (373)
T 2mad_H          329 GGPDLYALSAGTEVLHI  345 (373)
T ss_pred             CCeEEEEEcCCCCeEEE
Confidence            997778754 3443433

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=95.80  E-value=0.14  Score=42.57  Aligned_cols=71  Identities=17%  Similarity=-0.035  Sum_probs=48.6

Q ss_pred             CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ..+..++|+|||+.|+... ++.|.+.++.+.....+....                   +....+.|+|||+.+++...
T Consensus       164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~-------------------~~v~~~~~~~~~~~~l~s~~  224 (383)
T 3ei3_B          164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHK-------------------AKVTHAEFNPRCDWLMATSS  224 (383)
T ss_dssp             CCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSS-------------------SCEEEEEECSSCTTEEEEEE
T ss_pred             CCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCC-------------------CcEEEEEECCCCCCEEEEEe
Confidence            5578999999999988876 468999998544334443211                   13457899999995555666


Q ss_pred             cCCcceEEEEE
Q psy7767         175 NDARVHNMSYI  185 (200)
Q Consensus       175 D~s~v~~~~i~  185 (200)
                      .++.+..+.+.
T Consensus       225 ~d~~i~iwd~~  235 (383)
T 3ei3_B          225 VDATVKLWDLR  235 (383)
T ss_dssp             TTSEEEEEEGG
T ss_pred             CCCEEEEEeCC
Confidence            66666665543

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=95.77  E-value=0.1  Score=48.05  Aligned_cols=70  Identities=7%  Similarity=-0.083  Sum_probs=49.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|+... ++.|.+.++.+++..+......                  +....+.|||||+.|+.. 
T Consensus        55 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~l~~~-  115 (814)
T 3mkq_A           55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP------------------DYIRSIAVHPTKPYVLSG-  115 (814)
T ss_dssp             SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECSSSSEEEEE-
T ss_pred             CCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC------------------CCEEEEEEeCCCCEEEEE-
Confidence            46789999999999999986 4689999998776543332111                  134568999999988754 


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      .+++.+..+.
T Consensus       116 ~~dg~i~vw~  125 (814)
T 3mkq_A          116 SDDLTVKLWN  125 (814)
T ss_dssp             ETTSEEEEEE
T ss_pred             cCCCEEEEEE
Confidence            4445555443

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=95.72  E-value=0.041  Score=45.53  Aligned_cols=67  Identities=15%  Similarity=0.136  Sum_probs=44.9

Q ss_pred             CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ..+..++|||||+.|+... ++.|.+.+..+.....+....                   +....+.|+|||+.|+.. .
T Consensus       109 ~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l~~~-~  168 (425)
T 1r5m_A          109 NQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHR-------------------APIVSVKWNKDGTHIISM-D  168 (425)
T ss_dssp             BCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCC-------------------SCEEEEEECTTSSEEEEE-E
T ss_pred             CceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCC-------------------ccEEEEEECCCCCEEEEE-e
Confidence            4789999999999999886 467888885433333443211                   133578999999988755 3


Q ss_pred             cCCcceEE
Q psy7767         175 NDARVHNM  182 (200)
Q Consensus       175 D~s~v~~~  182 (200)
                      .++.+..+
T Consensus       169 ~d~~i~iw  176 (425)
T 1r5m_A          169 VENVTILW  176 (425)
T ss_dssp             TTCCEEEE
T ss_pred             cCCeEEEE
Confidence            44444444

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=95.72  E-value=0.13  Score=42.71  Aligned_cols=81  Identities=14%  Similarity=0.111  Sum_probs=51.1

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEE---EeeCCCcce-EecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINA---LTRDGIKGV-LFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~r---LT~dg~~~~-~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      +..+..++|+|||..++-..++.|.+.++.++....   +........ -..|.         -+....+.|||||+.|+
T Consensus       255 ~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~~~~~sp~g~~l~  325 (343)
T 2xzm_R          255 GSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGK---------NPQCTSLAWNALGKKLF  325 (343)
T ss_dssp             SSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCS---------CCCEEEEEECSSSCCEE
T ss_pred             CCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCC---------CCceEEEEECCCCCeEE
Confidence            456889999999999987778889999887654322   211110000 00000         01235789999999886


Q ss_pred             EEEEcCCcceEEEEE
Q psy7767         171 YMKFNDARVHNMSYI  185 (200)
Q Consensus       171 f~r~D~s~v~~~~i~  185 (200)
                       ....++.+..+.+.
T Consensus       326 -sg~~Dg~v~~w~~~  339 (343)
T 2xzm_R          326 -AGFTDGVIRTFSFE  339 (343)
T ss_dssp             -EEETTSEEEEEEEE
T ss_pred             -EecCCceEEEEEEE
Confidence             45666777777654

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=95.72  E-value=0.073  Score=43.98  Aligned_cols=86  Identities=9%  Similarity=-0.026  Sum_probs=48.0

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeE--EEeeCCCcceEecccccceeeeeee----C-CCcceEEccCC
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSIN--ALTRDGIKGVLFNGVADWVYEEEVF----S-STKTLWFSPDG  166 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~--rLT~dg~~~~~~nG~pdwv~eEEi~----~-~~~~~~WSPDG  166 (200)
                      ...+..++|+|||+.|+... ++.|.+.++.++...  .+..... .. .+-.+ ...-..+.    + ....+.|||||
T Consensus       330 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~-~~-~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~  406 (425)
T 1r5m_A          330 GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRD-GI-LNPLP-IPLYASYQSSQDNDYIFDLSWNCAG  406 (425)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----------------CEE-CCEEEEECCTTCCCCEEEEEECTTS
T ss_pred             CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccc-cc-cCccc-chhhhhhcCcccCCceEEEEccCCC
Confidence            56789999999999998886 568999988765411  1110000 00 00000 00000000    1 34578999999


Q ss_pred             CEEEEEEEcCCcceEEEE
Q psy7767         167 SILAYMKFNDARVHNMSY  184 (200)
Q Consensus       167 k~Laf~r~D~s~v~~~~i  184 (200)
                      +.|+.. ..++.+..+.+
T Consensus       407 ~~l~~~-~~dg~i~iw~~  423 (425)
T 1r5m_A          407 NKISVA-YSLQEGSVVAI  423 (425)
T ss_dssp             SEEEEE-ESSSCCEEEEC
T ss_pred             ceEEEE-ecCceEEEEee
Confidence            988754 55566776654

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=95.71  E-value=0.19  Score=42.58  Aligned_cols=70  Identities=9%  Similarity=-0.043  Sum_probs=47.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|+-.. ++.|.+.++.+++..+......                  +....+.|+|||+.++...
T Consensus       139 ~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~------------------~~v~~v~~s~~~~~~~~s~  200 (357)
T 4g56_B          139 DDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS------------------SEVNCVAACPGKDTIFLSC  200 (357)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCEEEEEECTTCSSCEEEE
T ss_pred             CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC------------------CCEEEEEEccCCCceeeee
Confidence            45688999999999998765 5689999988776544332111                  1234678999997655555


Q ss_pred             EcCCcceEE
Q psy7767         174 FNDARVHNM  182 (200)
Q Consensus       174 ~D~s~v~~~  182 (200)
                      ..++.+..+
T Consensus       201 ~~dg~v~~w  209 (357)
T 4g56_B          201 GEDGRILLW  209 (357)
T ss_dssp             ETTSCEEEC
T ss_pred             ccCCceEEE
Confidence            555555544

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=95.69  E-value=0.043  Score=44.49  Aligned_cols=69  Identities=10%  Similarity=0.063  Sum_probs=46.9

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCC----eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC-E
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRS----INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS-I  168 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~----~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk-~  168 (200)
                      ...+..++|+|||+.|+... ++.|.+.+++.+.    ...+....                   +....+.|+|||+ .
T Consensus        11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~~   71 (342)
T 1yfq_A           11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK-------------------HPLLCCNFIDNTDLQ   71 (342)
T ss_dssp             SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECS-------------------SCEEEEEEEESSSEE
T ss_pred             CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecC-------------------CceEEEEECCCCCcE
Confidence            45789999999999998875 5678888887766    33222211                   1345789999999 7


Q ss_pred             EEEEEEcCCcceEEE
Q psy7767         169 LAYMKFNDARVHNMS  183 (200)
Q Consensus       169 Laf~r~D~s~v~~~~  183 (200)
                      |+.. ..++.+..+.
T Consensus        72 l~~~-~~dg~i~~wd   85 (342)
T 1yfq_A           72 IYVG-TVQGEILKVD   85 (342)
T ss_dssp             EEEE-ETTSCEEEEC
T ss_pred             EEEE-cCCCeEEEEE
Confidence            7654 4445555543

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=95.60  E-value=0.28  Score=38.75  Aligned_cols=72  Identities=21%  Similarity=0.224  Sum_probs=46.9

Q ss_pred             CCCceeeEECc--CCCEEEEEE-cCcEEEEECCCCCe-------EEE-eeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          95 SNFLQLVQWSP--VGHDLIFVK-DNNLYQAYDDFRSI-------NAL-TRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        95 ~~~is~~~wSP--DGk~IAFV~-~gdLyv~~~~~g~~-------~rL-T~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      ...+..++|+|  ||+.|+... ++.|.+.++..+..       ..+ +..+.                 -+....+.|+
T Consensus        57 ~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~  119 (351)
T 3f3f_A           57 DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS-----------------KGSLYSVKFA  119 (351)
T ss_dssp             SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC-----------------SSCEEEEEEC
T ss_pred             CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeeccc-----------------CCceeEEEEc
Confidence            46789999999  699988876 56799988876542       111 11110                 0134578899


Q ss_pred             cC--CCEEEEEEEcCCcceEEEE
Q psy7767         164 PD--GSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       164 PD--Gk~Laf~r~D~s~v~~~~i  184 (200)
                      ||  |+.|+.. ..++.+..+.+
T Consensus       120 ~~~~~~~l~~~-~~dg~v~iwd~  141 (351)
T 3f3f_A          120 PAHLGLKLACL-GNDGILRLYDA  141 (351)
T ss_dssp             CGGGCSEEEEE-ETTCEEEEEEC
T ss_pred             CCCCCcEEEEe-cCCCcEEEecC
Confidence            99  8877654 45555666654

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=95.58  E-value=0.074  Score=44.94  Aligned_cols=66  Identities=20%  Similarity=0.004  Sum_probs=44.8

Q ss_pred             CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      .+..+.|||||+.|+-.. ++.|.+.++..+..........                  +....+.|||||+.|+-. ..
T Consensus       286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~------------------~~v~~l~~spdg~~l~sg-s~  346 (354)
T 2pbi_B          286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHE------------------NRVSTLRVSPDGTAFCSG-SW  346 (354)
T ss_dssp             CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCS------------------SCEEEEEECTTSSCEEEE-ET
T ss_pred             ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCC------------------CcEEEEEECCCCCEEEEE-cC
Confidence            467889999999987765 5689999987776543322111                  133578999999988754 34


Q ss_pred             CCcceE
Q psy7767         176 DARVHN  181 (200)
Q Consensus       176 ~s~v~~  181 (200)
                      ++.+.+
T Consensus       347 D~~v~v  352 (354)
T 2pbi_B          347 DHTLRV  352 (354)
T ss_dssp             TSEEEE
T ss_pred             CCCEEe
Confidence            444444

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=95.53  E-value=0.032  Score=45.29  Aligned_cols=71  Identities=11%  Similarity=0.034  Sum_probs=47.7

Q ss_pred             CCCceeeEECcCCCEEEEEE-----cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC---C
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-----DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD---G  166 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-----~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD---G  166 (200)
                      ...+..++|+|||+.++.+.     ++.|.+.++++++...+...+..                 +....+.|+||   |
T Consensus        18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~   80 (357)
T 3i2n_A           18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA-----------------KPIKCGTFGATSLQQ   80 (357)
T ss_dssp             SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES-----------------SCEEEEECTTCCTTT
T ss_pred             CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeeccc-----------------CcEEEEEEcCCCCCC
Confidence            45789999999999888776     67899999988776544321110                 12356889999   5


Q ss_pred             CEEEEEEEcCCcceEEE
Q psy7767         167 SILAYMKFNDARVHNMS  183 (200)
Q Consensus       167 k~Laf~r~D~s~v~~~~  183 (200)
                      +.|+.. ..++.+..+.
T Consensus        81 ~~l~~~-~~dg~i~iwd   96 (357)
T 3i2n_A           81 RYLATG-DFGGNLHIWN   96 (357)
T ss_dssp             CCEEEE-ETTSCEEEEC
T ss_pred             ceEEEe-cCCCeEEEEe
Confidence            766544 4445455443

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=95.51  E-value=0.085  Score=44.92  Aligned_cols=71  Identities=11%  Similarity=-0.014  Sum_probs=49.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|+-.. ++.|.+.++.+++..+.-....                  +....+.|+|||+.++...
T Consensus       127 ~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~------------------~~V~~~~~~~~~~~~l~s~  188 (344)
T 4gqb_B          127 DDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHA------------------AQVTCVAASPHKDSVFLSC  188 (344)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS------------------SCEEEEEECSSCTTEEEEE
T ss_pred             CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcC------------------CceEEEEecCCCCCceeee
Confidence            45689999999999998875 5679999998776543332111                  1234678999998766566


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      ..++.+..+.
T Consensus       189 s~D~~v~iwd  198 (344)
T 4gqb_B          189 SEDNRILLWD  198 (344)
T ss_dssp             ETTSCEEEEE
T ss_pred             cccccccccc
Confidence            6666666553

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=95.47  E-value=0.078  Score=43.20  Aligned_cols=74  Identities=22%  Similarity=0.181  Sum_probs=49.3

Q ss_pred             CCCceeeEECcC---CCEEEEEE-cCcEEEEECCCCC---eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767          95 SNFLQLVQWSPV---GHDLIFVK-DNNLYQAYDDFRS---INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS  167 (200)
Q Consensus        95 ~~~is~~~wSPD---Gk~IAFV~-~gdLyv~~~~~g~---~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk  167 (200)
                      ...+..++|+||   |+.|+... ++.|.+.++..+.   ...+.....       .         -+....+.|||||+
T Consensus       206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~---------~~~v~~~~~s~~g~  269 (379)
T 3jrp_A          206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEK-------F---------PDVLWRASWSLSGN  269 (379)
T ss_dssp             SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSC-------C---------SSCEEEEEECSSSC
T ss_pred             cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeecccc-------C---------CCcEEEEEEcCCCC
Confidence            456789999999   77777775 5678888887664   222222110       0         01335789999999


Q ss_pred             EEEEEEEcCCcceEEEEE
Q psy7767         168 ILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       168 ~Laf~r~D~s~v~~~~i~  185 (200)
                      .|+.. ..++.+..+.+.
T Consensus       270 ~l~~~-~~dg~i~iw~~~  286 (379)
T 3jrp_A          270 VLALS-GGDNKVTLWKEN  286 (379)
T ss_dssp             CEEEE-ESSSSEEEEEEE
T ss_pred             EEEEe-cCCCcEEEEeCC
Confidence            88755 445677777766

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=95.46  E-value=0.32  Score=39.19  Aligned_cols=69  Identities=14%  Similarity=0.089  Sum_probs=48.2

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE--ccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF--SPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W--SPDGk~Laf  171 (200)
                      ...+..++|+|||+.|+-.. ++.|.+.+++++...++.....                   ....+.|  +|||+.|+.
T Consensus        86 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~~~l~~  146 (368)
T 3mmy_A           86 TGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDA-------------------PVKTIHWIKAPNYSCVMT  146 (368)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS-------------------CEEEEEEEECSSCEEEEE
T ss_pred             cCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccC-------------------ceEEEEEEeCCCCCEEEE
Confidence            56789999999999998775 5689999998877665543221                   2346788  999987754


Q ss_pred             EEEcCCcceEEE
Q psy7767         172 MKFNDARVHNMS  183 (200)
Q Consensus       172 ~r~D~s~v~~~~  183 (200)
                      . ..++.+..+.
T Consensus       147 ~-~~dg~i~vwd  157 (368)
T 3mmy_A          147 G-SWDKTLKFWD  157 (368)
T ss_dssp             E-ETTSEEEEEC
T ss_pred             c-cCCCcEEEEE
Confidence            4 4444444443

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=95.45  E-value=0.054  Score=49.41  Aligned_cols=71  Identities=14%  Similarity=-0.016  Sum_probs=44.8

Q ss_pred             CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ..+..+++||||+.||-.. ++.|.+.++.++....+...+.        +         +....+.|||||++|+-. .
T Consensus       449 ~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h--------~---------~~v~~v~fspdg~~las~-s  510 (611)
T 1nr0_A          449 YNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH--------P---------AEITSVAFSNNGAFLVAT-D  510 (611)
T ss_dssp             SCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEEC--------S---------SCEEEEEECTTSSEEEEE-E
T ss_pred             CCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCC--------C---------CceEEEEECCCCCEEEEE-c
Confidence            3467789999999988776 4578888776654332221110        0         134578999999988744 4


Q ss_pred             cCCcceEEEE
Q psy7767         175 NDARVHNMSY  184 (200)
Q Consensus       175 D~s~v~~~~i  184 (200)
                      .++.+..+.+
T Consensus       511 ~d~~v~~w~~  520 (611)
T 1nr0_A          511 QSRKVIPYSV  520 (611)
T ss_dssp             TTSCEEEEEG
T ss_pred             CCCCEEEEEc
Confidence            4455555543

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=95.43  E-value=0.12  Score=42.78  Aligned_cols=59  Identities=17%  Similarity=0.049  Sum_probs=42.8

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|||||+.|+-.. ++.|.+.++..++.........                   ....+.|||||..|+..
T Consensus       196 ~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------------~v~~~~~sp~~~~la~~  255 (319)
T 3frx_A          196 NSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD-------------------EVFSLAFSPNRYWLAAA  255 (319)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS-------------------CEEEEEECSSSSEEEEE
T ss_pred             CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-------------------cEEEEEEcCCCCEEEEE
Confidence            45678999999999998775 5789999998766543322111                   23468999999988754

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=95.43  E-value=0.24  Score=39.18  Aligned_cols=32  Identities=9%  Similarity=0.126  Sum_probs=23.4

Q ss_pred             CCCceeeEECcCC----CEEEEEE-cCcEEEEECCCC
Q psy7767          95 SNFLQLVQWSPVG----HDLIFVK-DNNLYQAYDDFR  126 (200)
Q Consensus        95 ~~~is~~~wSPDG----k~IAFV~-~gdLyv~~~~~g  126 (200)
                      ...+..++|+|+|    +.|+-.. ++.|.+.++..+
T Consensus       214 ~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~  250 (351)
T 3f3f_A          214 KSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK  250 (351)
T ss_dssp             CSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred             CcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence            4678999999998    5555554 467888877654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=95.40  E-value=0.15  Score=41.39  Aligned_cols=70  Identities=14%  Similarity=0.019  Sum_probs=47.3

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|||+.|+... ++.|.+.++..++..+......                  +....+.|+|||+.|+-. 
T Consensus        65 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~s~-  125 (312)
T 4ery_A           65 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS------------------NYVFCCNFNPQSNLIVSG-  125 (312)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECSSSSEEEEE-
T ss_pred             CCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCC------------------CCEEEEEEcCCCCEEEEE-
Confidence            45688999999999998875 5689999998776544333211                  123467899999877644 


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      ..++.+..+.
T Consensus       126 ~~d~~i~iwd  135 (312)
T 4ery_A          126 SFDESVRIWD  135 (312)
T ss_dssp             ETTSCEEEEE
T ss_pred             eCCCcEEEEE
Confidence            4444454443

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=95.39  E-value=0.1  Score=43.44  Aligned_cols=67  Identities=16%  Similarity=-0.052  Sum_probs=45.4

Q ss_pred             CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      .+..++|||||+.|+-.. ++.|.+.++..+.....-....                  +....+.|||||+.|+-. ..
T Consensus       272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~------------------~~v~~~~~s~dg~~l~s~-s~  332 (340)
T 1got_B          272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD------------------NRVSCLGVTDDGMAVATG-SW  332 (340)
T ss_dssp             CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECTTSSCEEEE-ET
T ss_pred             ceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCC------------------CcEEEEEEcCCCCEEEEE-cC
Confidence            578899999999988775 4679999987766543322111                  123468999999988754 44


Q ss_pred             CCcceEE
Q psy7767         176 DARVHNM  182 (200)
Q Consensus       176 ~s~v~~~  182 (200)
                      ++.+.++
T Consensus       333 D~~i~iW  339 (340)
T 1got_B          333 DSFLKIW  339 (340)
T ss_dssp             TSCEEEE
T ss_pred             CccEEec
Confidence            4545443

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=95.38  E-value=0.088  Score=43.02  Aligned_cols=72  Identities=18%  Similarity=0.170  Sum_probs=50.9

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..+.|+|||+.|+... ++.|.+.++.+++.........                  .....+.|+|||+.|+- .
T Consensus       202 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~~-~  262 (372)
T 1k8k_C          202 CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET------------------LPLLAVTFITESSLVAA-G  262 (372)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS------------------CCEEEEEEEETTEEEEE-E
T ss_pred             CCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC------------------CCeEEEEEecCCCEEEE-E
Confidence            45688999999999988876 4679999998776544333221                  12346899999986653 3


Q ss_pred             EcCCcceEEEEEe
Q psy7767         174 FNDARVHNMSYIH  186 (200)
Q Consensus       174 ~D~s~v~~~~i~~  186 (200)
                       .++.+..+.+..
T Consensus       263 -~d~~i~i~~~~~  274 (372)
T 1k8k_C          263 -HDCFPVLFTYDS  274 (372)
T ss_dssp             -TTSSCEEEEEET
T ss_pred             -eCCeEEEEEccC
Confidence             667777777665

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=95.37  E-value=0.32  Score=39.26  Aligned_cols=72  Identities=14%  Similarity=0.084  Sum_probs=50.3

Q ss_pred             CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCeEEEee--CCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSINALTR--DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~~rLT~--dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ...+..++|+| +|+.|+... ++.|.+.++..++......  .+..                 +....+.|+|||+.|+
T Consensus       115 ~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~l~  177 (366)
T 3k26_A          115 GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR-----------------DEVLSADYDLLGEKIM  177 (366)
T ss_dssp             CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS-----------------SCEEEEEECTTSSEEE
T ss_pred             CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc-----------------CceeEEEECCCCCEEE
Confidence            56789999999 899888776 5789999998776654431  1110                 1345789999999886


Q ss_pred             EEEEcCCcceEEEE
Q psy7767         171 YMKFNDARVHNMSY  184 (200)
Q Consensus       171 f~r~D~s~v~~~~i  184 (200)
                      .. ..++.+..+.+
T Consensus       178 ~~-~~dg~i~i~d~  190 (366)
T 3k26_A          178 SC-GMDHSLKLWRI  190 (366)
T ss_dssp             EE-ETTSCEEEEES
T ss_pred             Ee-cCCCCEEEEEC
Confidence            44 44556666654

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=95.34  E-value=0.1  Score=42.84  Aligned_cols=69  Identities=7%  Similarity=-0.013  Sum_probs=46.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|+-.. ++.|.+.+++++...+......                  .....+.|+|||+.|+- .
T Consensus        13 ~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~s-~   73 (304)
T 2ynn_A           13 SDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE------------------TPVRAGKFIARKNWIIV-G   73 (304)
T ss_dssp             CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS------------------SCEEEEEEEGGGTEEEE-E
T ss_pred             CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC------------------CcEEEEEEeCCCCEEEE-E
Confidence            45789999999999988775 5689999988776543322111                  12346789999988764 3


Q ss_pred             EcCCcceEE
Q psy7767         174 FNDARVHNM  182 (200)
Q Consensus       174 ~D~s~v~~~  182 (200)
                      .+++.+..+
T Consensus        74 s~d~~i~vw   82 (304)
T 2ynn_A           74 SDDFRIRVF   82 (304)
T ss_dssp             ETTSEEEEE
T ss_pred             CCCCEEEEE
Confidence            444545444

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=95.33  E-value=0.082  Score=41.97  Aligned_cols=71  Identities=15%  Similarity=0.104  Sum_probs=48.0

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ...+..++|+|||+.++-..++.|.+.++..++..+......                  +....+.|+|||+.+  +..
T Consensus       225 ~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~~--~~~  284 (313)
T 3odt_A          225 ESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPA------------------ISIWSVDCMSNGDII--VGS  284 (313)
T ss_dssp             SSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSS------------------SCEEEEEECTTSCEE--EEE
T ss_pred             CceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccC------------------ceEEEEEEccCCCEE--EEe
Confidence            567899999999964433346789999998877654443221                  123568999999833  356


Q ss_pred             cCCcceEEEEE
Q psy7767         175 NDARVHNMSYI  185 (200)
Q Consensus       175 D~s~v~~~~i~  185 (200)
                      .++.+..+.+.
T Consensus       285 ~dg~i~iw~~~  295 (313)
T 3odt_A          285 SDNLVRIFSQE  295 (313)
T ss_dssp             TTSCEEEEESC
T ss_pred             CCCcEEEEeCC
Confidence            66667766644

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=95.33  E-value=0.11  Score=44.21  Aligned_cols=72  Identities=18%  Similarity=0.066  Sum_probs=47.7

Q ss_pred             ceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767          98 LQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND  176 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~  176 (200)
                      +..++|||+|+.|+-.. ++.|++.++..++...-...-     .+|.         -+....+.|||||+.|+ ....+
T Consensus       301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-----~~~h---------~~~v~~l~~s~dg~~l~-sgs~D  365 (380)
T 3iz6_a          301 VTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL-----QNSH---------EGRISCLGLSSDGSALC-TGSWD  365 (380)
T ss_dssp             CSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS-----CSSC---------CCCCCEEEECSSSSEEE-EECTT
T ss_pred             eEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc-----cCCC---------CCceEEEEECCCCCEEE-EeeCC
Confidence            67899999999987764 568999998766654222100     0010         02456789999999886 44555


Q ss_pred             CcceEEEE
Q psy7767         177 ARVHNMSY  184 (200)
Q Consensus       177 s~v~~~~i  184 (200)
                      +.+.++.+
T Consensus       366 ~~i~iW~~  373 (380)
T 3iz6_a          366 KNLKIWAF  373 (380)
T ss_dssp             SCEEEEEC
T ss_pred             CCEEEEec
Confidence            66777654

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=95.33  E-value=0.072  Score=45.28  Aligned_cols=72  Identities=14%  Similarity=0.086  Sum_probs=50.1

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|+-.. ++.|.+.++.+++.........                  .....+.|||||+.|+- .
T Consensus        66 ~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~------------------~~v~~~~~s~~g~~las-~  126 (380)
T 3iz6_a           66 SGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHC------------------PWVMECAFAPNGQSVAC-G  126 (380)
T ss_dssp             SSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCC------------------TTCCCCEECTTSSEEEE-C
T ss_pred             ccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCC------------------CCEEEEEECCCCCEEEE-e
Confidence            46789999999999988775 5689999988766543332111                  12346789999998864 3


Q ss_pred             EcCCcceEEEEE
Q psy7767         174 FNDARVHNMSYI  185 (200)
Q Consensus       174 ~D~s~v~~~~i~  185 (200)
                      ..++.+.++.+.
T Consensus       127 ~~d~~v~iw~~~  138 (380)
T 3iz6_a          127 GLDSACSIFNLS  138 (380)
T ss_dssp             CSSSCCEEEECC
T ss_pred             eCCCcEEEEECC
Confidence            455667776654

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=95.32  E-value=0.008  Score=49.99  Aligned_cols=73  Identities=5%  Similarity=-0.049  Sum_probs=46.4

Q ss_pred             CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|||||+.||.. .++.|.+.++.++....+.. .+.        .         +....+.|||||+.|+..
T Consensus        11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h--------~---------~~v~~~~~s~~~~~l~s~   73 (377)
T 3dwl_C           11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDH--------D---------KIVTCVDWAPKSNRIVTC   73 (377)
T ss_dssp             SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCC--------S---------SCEEEEEECTTTCCEEEE
T ss_pred             CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecC--------C---------ceEEEEEEeCCCCEEEEE
Confidence            3568899999999999888 56778888877653222221 110        0         133578999999988755


Q ss_pred             EEcCCcceEEEEE
Q psy7767         173 KFNDARVHNMSYI  185 (200)
Q Consensus       173 r~D~s~v~~~~i~  185 (200)
                       ..++.+..+.+.
T Consensus        74 -s~d~~v~vwd~~   85 (377)
T 3dwl_C           74 -SQDRNAYVYEKR   85 (377)
T ss_dssp             -ETTSSEEEC---
T ss_pred             -eCCCeEEEEEcC
Confidence             444556655543

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=95.32  E-value=0.04  Score=46.28  Aligned_cols=72  Identities=7%  Similarity=0.030  Sum_probs=48.2

Q ss_pred             CCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ..+..++|||||+.|+... ++.|.+.++.++........+..                 +....+.|+|||+.++++..
T Consensus       248 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~l~~g~  310 (420)
T 3vl1_A          248 SKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT-----------------CSCNSLTVDGNNANYIYAGY  310 (420)
T ss_dssp             CCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS-----------------SCEEEEEECSSCTTEEEEEE
T ss_pred             CcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC-----------------CCceeEEEeCCCCCEEEEEe
Confidence            4456678899999998775 46799999987765443332210                 13457899999994545666


Q ss_pred             cCCcceEEEE
Q psy7767         175 NDARVHNMSY  184 (200)
Q Consensus       175 D~s~v~~~~i  184 (200)
                      .++.+..+.+
T Consensus       311 ~dg~i~vwd~  320 (420)
T 3vl1_A          311 ENGMLAQWDL  320 (420)
T ss_dssp             TTSEEEEEET
T ss_pred             CCCeEEEEEc
Confidence            6666665543

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=95.27  E-value=0.12  Score=43.60  Aligned_cols=92  Identities=12%  Similarity=0.148  Sum_probs=51.2

Q ss_pred             CCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcce--Eeccc-c--cceeeeeeeCCCcceEEccCC-
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGV--LFNGV-A--DWVYEEEVFSSTKTLWFSPDG-  166 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~--~~nG~-p--dwv~eEEi~~~~~~~~WSPDG-  166 (200)
                      ....+..++|||||+.||... ++.|.+.++.++........+....  .+.|. +  +++...++-+....+.|+|++ 
T Consensus        27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~  106 (447)
T 3dw8_B           27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN  106 (447)
T ss_dssp             GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred             ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence            456789999999999999885 5789998887655211100000000  00010 0  001110111245689999998 


Q ss_pred             -CEEEEEEEcCCcceEEEEEe
Q psy7767         167 -SILAYMKFNDARVHNMSYIH  186 (200)
Q Consensus       167 -k~Laf~r~D~s~v~~~~i~~  186 (200)
                       ..|+ +...++.+..+.+..
T Consensus       107 ~~~l~-s~s~d~~i~iw~~~~  126 (447)
T 3dw8_B          107 AAQFL-LSTNDKTIKLWKISE  126 (447)
T ss_dssp             SSEEE-EEECSSCEEEEEEEE
T ss_pred             cceEE-EeCCCCeEEEEeccc
Confidence             5665 446667788877654

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=95.15  E-value=0.17  Score=42.09  Aligned_cols=69  Identities=14%  Similarity=-0.001  Sum_probs=46.3

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|+-.. ++.|.+.++.++..........                  +....+.|||||+.|+-. 
T Consensus        55 ~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~l~s~-  115 (340)
T 1got_B           55 LAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS------------------SWVMTCAYAPSGNYVACG-  115 (340)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS------------------SCEEEEEECTTSSEEEEE-
T ss_pred             CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCC------------------ccEEEEEECCCCCEEEEE-
Confidence            46789999999999987765 5689999988776543332211                  123467899999988754 


Q ss_pred             EcCCcceEE
Q psy7767         174 FNDARVHNM  182 (200)
Q Consensus       174 ~D~s~v~~~  182 (200)
                      ..++.+..+
T Consensus       116 ~~d~~v~iw  124 (340)
T 1got_B          116 GLDNICSIY  124 (340)
T ss_dssp             ETTCEEEEE
T ss_pred             eCCCeEEEE
Confidence            334444444

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=95.14  E-value=0.13  Score=43.57  Aligned_cols=71  Identities=14%  Similarity=0.071  Sum_probs=48.4

Q ss_pred             CceeeEECcCCCEEEEE----EcCcEEEEECCCCCe-EEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          97 FLQLVQWSPVGHDLIFV----KDNNLYQAYDDFRSI-NALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV----~~gdLyv~~~~~g~~-~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      .+..+.|+|||+.|+..    .++.|.+.++.++.. ..+.. +..                  .....+.|||||+.|+
T Consensus       222 ~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------------------~~v~~~~~s~~~~~l~  283 (402)
T 2aq5_A          222 RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS------------------SGVLLPFFDPDTNIVY  283 (402)
T ss_dssp             SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC------------------SSCEEEEEETTTTEEE
T ss_pred             cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCC------------------CceeEEEEcCCCCEEE
Confidence            36889999999988876    467899999886543 11211 111                  1345689999999887


Q ss_pred             EEEEcCCcceEEEEE
Q psy7767         171 YMKFNDARVHNMSYI  185 (200)
Q Consensus       171 f~r~D~s~v~~~~i~  185 (200)
                      .....++.+..+.+.
T Consensus       284 ~~g~~dg~i~i~d~~  298 (402)
T 2aq5_A          284 LCGKGDSSIRYFEIT  298 (402)
T ss_dssp             EEETTCSCEEEEEEC
T ss_pred             EEEcCCCeEEEEEec
Confidence            665556667666654

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=95.07  E-value=0.16  Score=42.27  Aligned_cols=71  Identities=14%  Similarity=0.003  Sum_probs=48.8

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|||+.|+-.. ++.|.+.++.+++..+......                  +....+.|||||+.|+- .
T Consensus        76 ~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~------------------~~v~~v~~sp~~~~l~s-~  136 (343)
T 2xzm_R           76 NHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ------------------SEVYSVAFSPDNRQILS-A  136 (343)
T ss_dssp             SSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC------------------SCEEEEEECSSTTEEEE-E
T ss_pred             CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC------------------CcEEEEEECCCCCEEEE-E
Confidence            45689999999999987664 5689999998776543222111                  12346899999998864 4


Q ss_pred             EcCCcceEEEE
Q psy7767         174 FNDARVHNMSY  184 (200)
Q Consensus       174 ~D~s~v~~~~i  184 (200)
                      ..++.+..+.+
T Consensus       137 ~~d~~i~~wd~  147 (343)
T 2xzm_R          137 GAEREIKLWNI  147 (343)
T ss_dssp             ETTSCEEEEES
T ss_pred             cCCCEEEEEec
Confidence            55566666654

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=95.02  E-value=0.21  Score=40.34  Aligned_cols=70  Identities=10%  Similarity=-0.041  Sum_probs=49.0

Q ss_pred             CCCceeeEECcCCC-EEEEEE-cCcEEEEEC-CCCCeEEEee--CCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          95 SNFLQLVQWSPVGH-DLIFVK-DNNLYQAYD-DFRSINALTR--DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk-~IAFV~-~gdLyv~~~-~~g~~~rLT~--dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ...+..++|+|||+ .|+... ++.|.+.++ .++....+..  ..                   +....+.|+| ++.|
T Consensus        56 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~-------------------~~v~~l~~~~-~~~l  115 (342)
T 1yfq_A           56 KHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEAN-------------------LGICRICKYG-DDKL  115 (342)
T ss_dssp             SSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCC-------------------SCEEEEEEET-TTEE
T ss_pred             CCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCC-------------------CceEEEEeCC-CCEE
Confidence            46789999999999 887775 578999999 8777655543  11                   1234688999 8877


Q ss_pred             EEEEEcCCcceEEEEE
Q psy7767         170 AYMKFNDARVHNMSYI  185 (200)
Q Consensus       170 af~r~D~s~v~~~~i~  185 (200)
                      +. ...++.+..+.+.
T Consensus       116 ~s-~~~d~~i~iwd~~  130 (342)
T 1yfq_A          116 IA-ASWDGLIEVIDPR  130 (342)
T ss_dssp             EE-EETTSEEEEECHH
T ss_pred             EE-EcCCCeEEEEccc
Confidence            64 4555556655443

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=95.00  E-value=0.03  Score=46.42  Aligned_cols=68  Identities=16%  Similarity=0.215  Sum_probs=41.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCC----eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRS----INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~----~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ...+..++|+|||+.|+... ++.|.+.++.++.    ...+....                   +....+.|+|||+.|
T Consensus        55 ~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~-------------------~~v~~~~~~~~~~~l  115 (377)
T 3dwl_C           55 DKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN-------------------RAATFVRWSPNEDKF  115 (377)
T ss_dssp             SSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCS-------------------SCEEEEECCTTSSCC
T ss_pred             CceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC-------------------CceEEEEECCCCCEE
Confidence            45689999999999998886 5789998887765    11111111                   133568899999988


Q ss_pred             EEEEEcCCcceEE
Q psy7767         170 AYMKFNDARVHNM  182 (200)
Q Consensus       170 af~r~D~s~v~~~  182 (200)
                      +.... ++.+..+
T Consensus       116 ~~~~~-d~~i~iw  127 (377)
T 3dwl_C          116 AVGSG-ARVISVC  127 (377)
T ss_dssp             EEEES-SSCEEEC
T ss_pred             EEEec-CCeEEEE
Confidence            76543 3444443

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=94.95  E-value=0.46  Score=43.39  Aligned_cols=73  Identities=12%  Similarity=0.057  Sum_probs=45.8

Q ss_pred             eecCCCCCceeeEECcCCCEEEEEE-cCcEEEEEC--CCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc--
Q psy7767          90 SDLDGSNFLQLVQWSPVGHDLIFVK-DNNLYQAYD--DFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP--  164 (200)
Q Consensus        90 ~~lt~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~--~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP--  164 (200)
                      ..+..+.....+++||||+.|+-.. ++.|.+.++  .+++..+-...|.                   ...++.|||  
T Consensus       173 ~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~-------------------~p~~va~sp~~  233 (543)
T 1nir_A          173 KVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI-------------------EARSVESSKFK  233 (543)
T ss_dssp             EEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS-------------------EEEEEEECCST
T ss_pred             EEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCC-------------------CcceEEeCCCc
Confidence            3343344477889999999986664 457999998  5554432222221                   234688999  


Q ss_pred             --CCCEEEEEEEcCCcceE
Q psy7767         165 --DGSILAYMKFNDARVHN  181 (200)
Q Consensus       165 --DGk~Laf~r~D~s~v~~  181 (200)
                        ||++|+.....+..+.+
T Consensus       234 ~~dg~~l~v~~~~~~~v~v  252 (543)
T 1nir_A          234 GYEDRYTIAGAYWPPQFAI  252 (543)
T ss_dssp             TCTTTEEEEEEEESSEEEE
T ss_pred             CCCCCEEEEEEccCCeEEE
Confidence              99988655444444433

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=94.89  E-value=0.16  Score=43.48  Aligned_cols=69  Identities=10%  Similarity=-0.009  Sum_probs=41.0

Q ss_pred             ecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767          91 DLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTK  158 (200)
Q Consensus        91 ~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~  158 (200)
                      .+..+... .+++||||+.+.-+.           ++.|.+.++.+++.. .+.-.+..  ...|           ....
T Consensus        46 ~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~--~~~g-----------~~p~  111 (361)
T 2oiz_A           46 MVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKR--VQGL-----------NYDG  111 (361)
T ss_dssp             EEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTB--CCBC-----------CCGG
T ss_pred             EecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccc--cccC-----------CCcc
Confidence            33333334 889999999976553           234888888776654 33321110  0001           1356


Q ss_pred             ceEEccCCCEEEEEE
Q psy7767         159 TLWFSPDGSILAYMK  173 (200)
Q Consensus       159 ~~~WSPDGk~Laf~r  173 (200)
                      .+.+||||++|+-..
T Consensus       112 ~i~~spdg~~l~v~n  126 (361)
T 2oiz_A          112 LFRQTTDGKFIVLQN  126 (361)
T ss_dssp             GEEECTTSSEEEEEE
T ss_pred             eEEECCCCCEEEEEC
Confidence            789999999875443

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=94.81  E-value=0.085  Score=50.21  Aligned_cols=70  Identities=19%  Similarity=0.332  Sum_probs=45.6

Q ss_pred             CceeeEECcCCCEEEEEE-cCcEEEEECCCCCe--------EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767          97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSI--------NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS  167 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~--------~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk  167 (200)
                      .+..++|||||+.||-.. +|.|-+.++.++..        ..+....      .|..+|+         ..+.||||| 
T Consensus       131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~------~gh~~~V---------~sVawSPdg-  194 (588)
T 2j04_A          131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD------AGSKDWV---------THIVWYEDV-  194 (588)
T ss_dssp             CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC------TTCCCCE---------EEEEEETTE-
T ss_pred             cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc------ccccccE---------EEEEEcCCc-
Confidence            588999999999999997 57888889887642        2222111      1222344         368999999 


Q ss_pred             EEEEEEEcCCcceEEEE
Q psy7767         168 ILAYMKFNDARVHNMSY  184 (200)
Q Consensus       168 ~Laf~r~D~s~v~~~~i  184 (200)
                       |+-. ..++.+..+.+
T Consensus       195 -Laas-s~D~tVrlWd~  209 (588)
T 2j04_A          195 -LVAA-LSNNSVFSMTV  209 (588)
T ss_dssp             -EEEE-ETTCCEEEECC
T ss_pred             -EEEE-eCCCeEEEEEC
Confidence             5433 44455665543

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=94.76  E-value=0.29  Score=44.98  Aligned_cols=89  Identities=17%  Similarity=0.084  Sum_probs=52.2

Q ss_pred             CCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEE-EeeCCCcce--EecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINA-LTRDGIKGV--LFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~r-LT~dg~~~~--~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ....+..+.|||||..|+-..++.|.+.++.++...+ +..+.....  ..+..+.-. ... .....++.|||||+.|+
T Consensus       601 ~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~l~~spdg~~l~  678 (694)
T 3dm0_A          601 ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAAT-KRK-VIYCTSLNWSADGSTLF  678 (694)
T ss_dssp             CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC-----------------C-CCCEEEEEECTTSSEEE
T ss_pred             CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccC-Cce-eEEeeeEEEcCCCCEEE
Confidence            3556789999999999998888899999998776543 221111000  000000000 000 00135689999999886


Q ss_pred             EEEEcCCcceEEEEE
Q psy7767         171 YMKFNDARVHNMSYI  185 (200)
Q Consensus       171 f~r~D~s~v~~~~i~  185 (200)
                       ....++.+..+.+.
T Consensus       679 -sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          679 -SGYTDGVIRVWGIG  692 (694)
T ss_dssp             -EEETTSEEEEEEC-
T ss_pred             -EEcCCCeEEEEecc
Confidence             55666777777653

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=94.65  E-value=0.16  Score=41.33  Aligned_cols=73  Identities=14%  Similarity=0.068  Sum_probs=47.2

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccC--CCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD--GSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD--Gk~La  170 (200)
                      ...+..++|||||+.||... ++.|.+.+++.+....+.. .+..                 +....+.|+|+  |+.|+
T Consensus        11 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~~~l~   73 (379)
T 3jrp_A           11 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE-----------------GPVWRVDWAHPKFGTILA   73 (379)
T ss_dssp             CCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS-----------------SCEEEEEECCGGGCSEEE
T ss_pred             cccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCC-----------------CcEEEEEeCCCCCCCEEE
Confidence            46789999999999999885 6778888886443332221 1110                 12356889988  87765


Q ss_pred             EEEEcCCcceEEEEE
Q psy7767         171 YMKFNDARVHNMSYI  185 (200)
Q Consensus       171 f~r~D~s~v~~~~i~  185 (200)
                      - ...++.+..+.+.
T Consensus        74 s-~~~dg~v~iwd~~   87 (379)
T 3jrp_A           74 S-CSYDGKVLIWKEE   87 (379)
T ss_dssp             E-EETTSCEEEEEEE
T ss_pred             E-eccCCEEEEEEcC
Confidence            4 4555666666543

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=94.61  E-value=0.087  Score=44.45  Aligned_cols=78  Identities=4%  Similarity=0.000  Sum_probs=48.3

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCC-CCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC-CEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDF-RSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG-SILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~-g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG-k~Laf~  172 (200)
                      ...+..++|+|||+.|+-..++.|.+.++.. +...++..-....  ..+..         +....+.|+||| +.|+ .
T Consensus       177 ~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~---------~~v~~~~~~p~~~~~l~-s  244 (447)
T 3dw8_B          177 TYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPAN--MEELT---------EVITAAEFHPNSCNTFV-Y  244 (447)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSS--GGGCC---------CCEEEEEECSSCTTEEE-E
T ss_pred             CcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeeccccc--ccccC---------cceEEEEECCCCCcEEE-E
Confidence            4668999999999999988778899999873 3333322100000  00100         134578999999 6665 4


Q ss_pred             EEcCCcceEEEE
Q psy7767         173 KFNDARVHNMSY  184 (200)
Q Consensus       173 r~D~s~v~~~~i  184 (200)
                      ...++.+..+.+
T Consensus       245 ~~~dg~i~iwd~  256 (447)
T 3dw8_B          245 SSSKGTIRLCDM  256 (447)
T ss_dssp             EETTSCEEEEET
T ss_pred             EeCCCeEEEEEC
Confidence            455555666553

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=94.60  E-value=0.11  Score=42.55  Aligned_cols=59  Identities=15%  Similarity=0.229  Sum_probs=36.8

Q ss_pred             CCceeeEECcCCCEEEEEEc-------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          96 NFLQLVQWSPVGHDLIFVKD-------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~-------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      ..+..+.++|||+..+-...       +.||..+.++++...+...                   +....++.|+|||+.
T Consensus       135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------------~~~~~~i~~~~dg~~  195 (333)
T 2dg1_A          135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-------------------ISVANGIALSTDEKV  195 (333)
T ss_dssp             CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-------------------ESSEEEEEECTTSSE
T ss_pred             CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-------------------CCcccceEECCCCCE
Confidence            34677889999864332221       4688877666555555431                   113456889999988


Q ss_pred             EEEEE
Q psy7767         169 LAYMK  173 (200)
Q Consensus       169 Laf~r  173 (200)
                      |++..
T Consensus       196 l~v~~  200 (333)
T 2dg1_A          196 LWVTE  200 (333)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            76553

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=94.60  E-value=0.3  Score=40.52  Aligned_cols=72  Identities=19%  Similarity=0.196  Sum_probs=45.1

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCC-CCe-EEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDF-RSI-NALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~-g~~-~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ...+..++|||||+.||-.. ++.|.+.++.. +.. ..+.. .+-        .         .....+.|+|||+.|+
T Consensus       107 ~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h--------~---------~~v~~v~~~p~~~~l~  169 (330)
T 2hes_X          107 ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH--------S---------QDVKHVIWHPSEALLA  169 (330)
T ss_dssp             --CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC--------S---------SCEEEEEECSSSSEEE
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC--------C---------CceEEEEECCCCCEEE
Confidence            45688999999999998775 57899988843 221 11111 110        0         1235689999999776


Q ss_pred             EEEEcCCcceEEEE
Q psy7767         171 YMKFNDARVHNMSY  184 (200)
Q Consensus       171 f~r~D~s~v~~~~i  184 (200)
                      - ...++.+..+.+
T Consensus       170 s-~s~D~~i~iW~~  182 (330)
T 2hes_X          170 S-SSYDDTVRIWKD  182 (330)
T ss_dssp             E-EETTSCEEEEEE
T ss_pred             E-EcCCCeEEEEEC
Confidence            4 455556666643

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=94.54  E-value=0.19  Score=48.90  Aligned_cols=69  Identities=16%  Similarity=0.052  Sum_probs=48.2

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.||... ++.|.+.++.+++..+......                  +....+.|||||+.|+-. 
T Consensus       615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~------------------~~v~~~~~s~~~~~l~s~-  675 (1249)
T 3sfz_A          615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHE------------------DEVLCCAFSSDDSYIATC-  675 (1249)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS------------------SCEEEEEECTTSSEEEEE-
T ss_pred             cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCC------------------CCEEEEEEecCCCEEEEE-
Confidence            46789999999999998875 5689999998876543332111                  123568999999988755 


Q ss_pred             EcCCcceEE
Q psy7767         174 FNDARVHNM  182 (200)
Q Consensus       174 ~D~s~v~~~  182 (200)
                      ..++.+.++
T Consensus       676 ~~d~~v~vw  684 (1249)
T 3sfz_A          676 SADKKVKIW  684 (1249)
T ss_dssp             ETTSEEEEE
T ss_pred             eCCCeEEEE
Confidence            344444444

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=94.53  E-value=0.43  Score=41.10  Aligned_cols=84  Identities=15%  Similarity=0.157  Sum_probs=49.9

Q ss_pred             CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee---CCCcce-E-ecccccceeeeeeeCCCcceEEccCCC
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR---DGIKGV-L-FNGVADWVYEEEVFSSTKTLWFSPDGS  167 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~---dg~~~~-~-~nG~pdwv~eEEi~~~~~~~~WSPDGk  167 (200)
                      ...+..++|+|+|+.+..+.  ++.|.+.++......+...   ++.... . ..|.         -+....+.|+|+|+
T Consensus       321 ~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h---------~~~v~~~~~~p~~~  391 (430)
T 2xyi_A          321 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGH---------TAKISDFSWNPNEP  391 (430)
T ss_dssp             SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCC---------SSCEEEEEECSSST
T ss_pred             CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCC---------CCCceEEEECCCCC
Confidence            46789999999998755554  4678888876522111000   000000 0 0000         01346789999999


Q ss_pred             EEEEEEEcCCcceEEEEEee
Q psy7767         168 ILAYMKFNDARVHNMSYIHY  187 (200)
Q Consensus       168 ~Laf~r~D~s~v~~~~i~~~  187 (200)
                      .++....+++.+.++.+...
T Consensus       392 ~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          392 WIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             TEEEEEETTSEEEEEEECHH
T ss_pred             CEEEEEECCCCEEEeEcccc
Confidence            66666677788888887644

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=94.53  E-value=0.26  Score=41.51  Aligned_cols=71  Identities=10%  Similarity=0.045  Sum_probs=47.3

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|||+.||-.. ++.|.+.+..++..........                  .....+.|||||+.|+-. 
T Consensus        64 ~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~------------------~~v~~~~~sp~g~~lasg-  124 (354)
T 2pbi_B           64 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC------------------TWVMACAYAPSGCAIACG-  124 (354)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS------------------SCCCEEEECTTSSEEEEE-
T ss_pred             CCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCC------------------CCEEEEEECCCCCEEEEe-
Confidence            46789999999999987765 5678888887665543332221                  124578999999988743 


Q ss_pred             EcCCcceEEEE
Q psy7767         174 FNDARVHNMSY  184 (200)
Q Consensus       174 ~D~s~v~~~~i  184 (200)
                      ..++.+..+.+
T Consensus       125 ~~d~~i~v~~~  135 (354)
T 2pbi_B          125 GLDNKCSVYPL  135 (354)
T ss_dssp             STTSEEEEEEC
T ss_pred             eCCCCEEEEEE
Confidence            33444444443

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=94.44  E-value=0.14  Score=43.29  Aligned_cols=70  Identities=9%  Similarity=-0.002  Sum_probs=46.5

Q ss_pred             CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCe--------EEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSI--------NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~--------~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      ...+..++|+| +|+.|+-.. ++.|.+.++..+..        ..+....                   +....+.|+|
T Consensus        81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~-------------------~~v~~~~~~p  141 (402)
T 2aq5_A           81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT-------------------KRVGIVAWHP  141 (402)
T ss_dssp             SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS-------------------SCEEEEEECS
T ss_pred             CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC-------------------CeEEEEEECc
Confidence            46789999999 888887775 56799998887631        1222111                   1345689999


Q ss_pred             CCCEEEEEEEcCCcceEEE
Q psy7767         165 DGSILAYMKFNDARVHNMS  183 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~~~~  183 (200)
                      ||+.+++....++.+.++.
T Consensus       142 ~~~~~l~s~~~dg~i~iwd  160 (402)
T 2aq5_A          142 TAQNVLLSAGCDNVILVWD  160 (402)
T ss_dssp             SBTTEEEEEETTSCEEEEE
T ss_pred             CCCCEEEEEcCCCEEEEEE
Confidence            9965555666666565554

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=94.29  E-value=0.39  Score=42.02  Aligned_cols=71  Identities=14%  Similarity=0.179  Sum_probs=49.9

Q ss_pred             CCCceeeEECc----------CCCEEEEEE-cCcEEEEECCCCC-eEEEeeCCCcceEecccccceeeeeeeCCCcceEE
Q psy7767          95 SNFLQLVQWSP----------VGHDLIFVK-DNNLYQAYDDFRS-INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF  162 (200)
Q Consensus        95 ~~~is~~~wSP----------DGk~IAFV~-~gdLyv~~~~~g~-~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W  162 (200)
                      ...+..++|||          ||+.||... ++.|++.+++++. ..+... +..                 +....+.|
T Consensus       531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~h~-----------------~~v~~l~~  592 (615)
T 1pgu_A          531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN-AHK-----------------DGVNNLLW  592 (615)
T ss_dssp             SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT-SST-----------------TCEEEEEE
T ss_pred             CCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhh-cCc-----------------cceEEEEE
Confidence            45689999999          999999886 5689999998763 322221 110                 13457899


Q ss_pred             ccCCCEEEEEEEcCCcceEEEEE
Q psy7767         163 SPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       163 SPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      ||||+ |+ ....++.+..+.+.
T Consensus       593 s~~~~-l~-s~~~d~~v~iw~~~  613 (615)
T 1pgu_A          593 ETPST-LV-SSGADACIKRWNVV  613 (615)
T ss_dssp             EETTE-EE-EEETTSCEEEEEEC
T ss_pred             cCCCC-eE-EecCCceEEEEeee
Confidence            99998 64 55666777777653

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=94.29  E-value=0.14  Score=45.28  Aligned_cols=69  Identities=14%  Similarity=0.162  Sum_probs=44.8

Q ss_pred             CCCceeeEECcC-CCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPV-GHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPD-Gk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      +..+..++|+|+ ++.||-.. ++.|.+.++..+.... ...+..                 .....+.|||||++|+-.
T Consensus       149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~-~~~~~~-----------------~~v~~v~wspdg~~lasg  210 (434)
T 2oit_A          149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVC-ATLPST-----------------VAVTSVCWSPKGKQLAVG  210 (434)
T ss_dssp             GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEE-EEECGG-----------------GCEEEEEECTTSSCEEEE
T ss_pred             CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCccee-eccCCC-----------------CceeEEEEcCCCCEEEEE
Confidence            456899999998 67777654 6789999988763322 211100                 134578999999988754


Q ss_pred             EEcCCcceEE
Q psy7767         173 KFNDARVHNM  182 (200)
Q Consensus       173 r~D~s~v~~~  182 (200)
                      . .++.+.++
T Consensus       211 s-~dg~v~iw  219 (434)
T 2oit_A          211 K-QNGTVVQY  219 (434)
T ss_dssp             E-TTSCEEEE
T ss_pred             c-CCCcEEEE
Confidence            3 44445444

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=94.28  E-value=0.18  Score=41.49  Aligned_cols=45  Identities=9%  Similarity=0.158  Sum_probs=30.8

Q ss_pred             ceeecCCC-CCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee
Q psy7767          88 DVSDLDGS-NFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR  133 (200)
Q Consensus        88 ~v~~lt~~-~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~  133 (200)
                      .++.+..+ .....|.|+|||+.|.|+-  ++.|+..+. ++....+..
T Consensus        36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~   83 (305)
T 3dr2_A           36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLD   83 (305)
T ss_dssp             CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEE
T ss_pred             ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeC
Confidence            55555543 3447899999999998885  467888877 455544443

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=94.22  E-value=0.58  Score=45.58  Aligned_cols=68  Identities=18%  Similarity=0.196  Sum_probs=49.0

Q ss_pred             CceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767          97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND  176 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~  176 (200)
                      .+...+|||||+.++...++.+.+.++.++........+..                 +....+.|||||+.|+.. ..+
T Consensus       800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~-----------------~~v~~~~~sp~~~~l~~~-~~d  861 (1249)
T 3sfz_A          800 IVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH-----------------STIQYCDFSPYDHLAVIA-LSQ  861 (1249)
T ss_dssp             CBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS-----------------SCCCEEEECSSTTEEEEE-CSS
T ss_pred             eEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC-----------------CceEEEEEcCCCCEEEEE-eCC
Confidence            56788999999999999999999999988776554443321                 245678999999987654 333


Q ss_pred             CcceEE
Q psy7767         177 ARVHNM  182 (200)
Q Consensus       177 s~v~~~  182 (200)
                      +.+..+
T Consensus       862 g~v~vw  867 (1249)
T 3sfz_A          862 YCVELW  867 (1249)
T ss_dssp             SCEEEE
T ss_pred             CeEEEE
Confidence            334433

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=94.18  E-value=0.2  Score=41.59  Aligned_cols=78  Identities=8%  Similarity=-0.051  Sum_probs=47.3

Q ss_pred             CCCceeeEECcCC-CEEEEE-EcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVG-HDLIFV-KDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDG-k~IAFV-~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|+|+| +.++-. .++.|.+.++..++..........   ..|..         .....+.|+|||..+++.
T Consensus       165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~---------~~v~~~~~~~~~~~~l~~  232 (416)
T 2pm9_A          165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP---NSGIK---------QQLSVVEWHPKNSTRVAT  232 (416)
T ss_dssp             SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC---SSCCC---------CCEEEEEECSSCTTEEEE
T ss_pred             CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc---ccccC---------CceEEEEECCCCCCEEEE
Confidence            4567899999995 555443 356899999987765443332110   00000         134578999999655556


Q ss_pred             EEcCC---cceEEEE
Q psy7767         173 KFNDA---RVHNMSY  184 (200)
Q Consensus       173 r~D~s---~v~~~~i  184 (200)
                      ..+++   .+..+.+
T Consensus       233 ~~~d~~~~~i~~~d~  247 (416)
T 2pm9_A          233 ATGSDNDPSILIWDL  247 (416)
T ss_dssp             EECCSSSCCCCEEET
T ss_pred             EECCCCCceEEEEeC
Confidence            55555   5666654

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=94.16  E-value=0.41  Score=43.31  Aligned_cols=72  Identities=10%  Similarity=-0.078  Sum_probs=43.1

Q ss_pred             ceeecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeC
Q psy7767          88 DVSDLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFS  155 (200)
Q Consensus        88 ~v~~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~  155 (200)
                      -+..+..+... .+.+||||+++....           ++.|.+.|..+++.. .|.-.+.+.. .-|           .
T Consensus       111 vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~-~~g-----------~  177 (426)
T 3c75_H          111 ILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRF-LVG-----------T  177 (426)
T ss_dssp             EEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC-CBS-----------C
T ss_pred             EEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccc-ccC-----------C
Confidence            34444444445 899999999975543           246888888877654 3332211100 000           1


Q ss_pred             CCcceEEccCCCEEEEE
Q psy7767         156 STKTLWFSPDGSILAYM  172 (200)
Q Consensus       156 ~~~~~~WSPDGk~Laf~  172 (200)
                      ...++.+||||++|+..
T Consensus       178 ~P~~~~~spDGk~lyV~  194 (426)
T 3c75_H          178 YQWMNALTPDNKNLLFY  194 (426)
T ss_dssp             CGGGSEECTTSSEEEEE
T ss_pred             CcceEEEcCCCCEEEEE
Confidence            34578999999987544

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=94.14  E-value=0.34  Score=39.57  Aligned_cols=70  Identities=7%  Similarity=-0.069  Sum_probs=48.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+...+|+|||+.|+-.. ++.|.+.++.+++..+......                  +....+.|+|||+.|+ ..
T Consensus        55 ~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~~l~-sg  115 (304)
T 2ynn_A           55 ETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP------------------DYIRSIAVHPTKPYVL-SG  115 (304)
T ss_dssp             SSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECSSSSEEE-EE
T ss_pred             CCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCC------------------CcEEEEEEcCCCCEEE-EE
Confidence            35678899999999988775 4679999998776543332111                  1234688999998776 45


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      ..++.+..+.
T Consensus       116 s~D~~v~lWd  125 (304)
T 2ynn_A          116 SDDLTVKLWN  125 (304)
T ss_dssp             ETTSCEEEEE
T ss_pred             CCCCeEEEEE
Confidence            5566666654

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=94.10  E-value=0.31  Score=40.45  Aligned_cols=78  Identities=18%  Similarity=0.127  Sum_probs=43.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|||+.||-.. ++.|.+.+++.+.....  .......+.|..         +....+.|||||++|+-. 
T Consensus        58 ~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~--~~~~~~~~~~h~---------~~V~~v~~sp~g~~las~-  125 (330)
T 2hes_X           58 KKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTF--EMDLLAIIEGHE---------NEVKGVAWSNDGYYLATC-  125 (330)
T ss_dssp             CSCEEEEEECTTSSEEEEEETTSCEEEEEC-------C--CCEEEEEEC-------------CEEEEEECTTSCEEEEE-
T ss_pred             cCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccc--cceeEEEEcCCC---------CcEEEEEECCCCCEEEEE-
Confidence            45689999999999988775 56788887753211000  000000011110         123578999999988644 


Q ss_pred             EcCCcceEEEE
Q psy7767         174 FNDARVHNMSY  184 (200)
Q Consensus       174 ~D~s~v~~~~i  184 (200)
                      ..++.+..+.+
T Consensus       126 s~D~~v~iwd~  136 (330)
T 2hes_X          126 SRDKSVWIWET  136 (330)
T ss_dssp             ETTSCEEEEEC
T ss_pred             eCCCEEEEEec
Confidence            44555666654

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=94.10  E-value=0.28  Score=39.68  Aligned_cols=45  Identities=16%  Similarity=0.229  Sum_probs=31.5

Q ss_pred             ceeecCC-CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee
Q psy7767          88 DVSDLDG-SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR  133 (200)
Q Consensus        88 ~v~~lt~-~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~  133 (200)
                      +++.+.. ......++|+|||+.|.++.  ++.|+..+.+++ ...+..
T Consensus        19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~   66 (296)
T 3e5z_A           19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMH   66 (296)
T ss_dssp             CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEES
T ss_pred             cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEEC
Confidence            3444443 23457899999999888875  568999998877 555543

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=93.99  E-value=0.32  Score=41.84  Aligned_cols=71  Identities=14%  Similarity=0.143  Sum_probs=48.8

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..+.|+|+|+.|+-.. ++.|.+.++++++..+......                  +....+.|+|||+.|+ ..
T Consensus       108 ~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~------------------~~V~~v~~~~~~~~l~-sg  168 (410)
T 1vyh_C          108 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT------------------DSVQDISFDHSGKLLA-SC  168 (410)
T ss_dssp             SSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCS------------------SCEEEEEECTTSSEEE-EE
T ss_pred             CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccC------------------CcEEEEEEcCCCCEEE-EE
Confidence            45688999999999887775 5689999998776543322111                  1234688999999775 44


Q ss_pred             EcCCcceEEEE
Q psy7767         174 FNDARVHNMSY  184 (200)
Q Consensus       174 ~D~s~v~~~~i  184 (200)
                      ..++.+..+.+
T Consensus       169 s~D~~i~iwd~  179 (410)
T 1vyh_C          169 SADMTIKLWDF  179 (410)
T ss_dssp             ETTSCCCEEET
T ss_pred             eCCCeEEEEeC
Confidence            55566666643

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=93.88  E-value=0.11  Score=44.46  Aligned_cols=59  Identities=8%  Similarity=0.091  Sum_probs=39.4

Q ss_pred             eecCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCC--CeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          90 SDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFR--SIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        90 ~~lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g--~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      ..+..+. ...+++||||+.|+-..++.|.+.+++++  +.. ++...|.                   ....+.++|||
T Consensus       300 ~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i~~~G~-------------------~P~~~~~~p~G  359 (361)
T 2oiz_A          300 ARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGAAE-------------------ASLQVQFHPVG  359 (361)
T ss_dssp             EEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEETTSCS-------------------SEEEEEECCCS
T ss_pred             EEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEeccCCC-------------------CcEEEEecCCC
Confidence            3444455 88999999999654333468999999888  443 2222232                   34567899999


Q ss_pred             CE
Q psy7767         167 SI  168 (200)
Q Consensus       167 k~  168 (200)
                      +.
T Consensus       360 ~~  361 (361)
T 2oiz_A          360 GT  361 (361)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=93.74  E-value=0.2  Score=43.24  Aligned_cols=73  Identities=10%  Similarity=0.070  Sum_probs=49.4

Q ss_pred             CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCC-e-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRS-I-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~-~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ...+..++|+|+|+.+..+.  ++.|.+.++.... . ..+....                   +....+.|||||+.++
T Consensus       277 ~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~-------------------~~v~~i~~sp~~~~~l  337 (430)
T 2xyi_A          277 TAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-------------------DEIFQVQWSPHNETIL  337 (430)
T ss_dssp             SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS-------------------SCEEEEEECSSCTTEE
T ss_pred             CCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC-------------------CCEEEEEECCCCCCEE
Confidence            56688999999998655443  5679999987632 2 2222111                   1335789999998876


Q ss_pred             EEEEcCCcceEEEEEe
Q psy7767         171 YMKFNDARVHNMSYIH  186 (200)
Q Consensus       171 f~r~D~s~v~~~~i~~  186 (200)
                      .....++.+.++.+..
T Consensus       338 ~s~~~d~~i~iwd~~~  353 (430)
T 2xyi_A          338 ASSGTDRRLHVWDLSK  353 (430)
T ss_dssp             EEEETTSCCEEEEGGG
T ss_pred             EEEeCCCcEEEEeCCC
Confidence            6767777777776654

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=93.72  E-value=0.19  Score=44.36  Aligned_cols=71  Identities=10%  Similarity=-0.044  Sum_probs=43.1

Q ss_pred             eeecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeEEEeeCC-CcceEecccccceeeeeeeCC
Q psy7767          89 VSDLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSINALTRDG-IKGVLFNGVADWVYEEEVFSS  156 (200)
Q Consensus        89 v~~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~rLT~dg-~~~~~~nG~pdwv~eEEi~~~  156 (200)
                      +.++..+..- .+.+||||+++....           ++.|.+.|+.+++..+-..-| ... +.-|           ..
T Consensus        59 ~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~-~~~g-----------~~  125 (368)
T 1mda_H           59 LGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR-FSVG-----------PR  125 (368)
T ss_dssp             EEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS-CCBS-----------CC
T ss_pred             EEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc-cccC-----------CC
Confidence            3344434444 899999999975553           356999998887764332212 100 0000           13


Q ss_pred             CcceEEccCCCEEEEE
Q psy7767         157 TKTLWFSPDGSILAYM  172 (200)
Q Consensus       157 ~~~~~WSPDGk~Laf~  172 (200)
                      ...+.+||||++|+..
T Consensus       126 P~~ia~SpDGk~lyVa  141 (368)
T 1mda_H          126 VHIIGNCASSACLLFF  141 (368)
T ss_dssp             TTSEEECTTSSCEEEE
T ss_pred             cceEEEcCCCCEEEEE
Confidence            5678999999987544

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=93.60  E-value=0.18  Score=42.29  Aligned_cols=55  Identities=20%  Similarity=0.216  Sum_probs=35.1

Q ss_pred             CceeeEECcCCCEEEEEEc--------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD--------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~--------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      .+.++.++|||+. .+...        +.||..+  +++..++....                   ....++.|||||+.
T Consensus       135 ~~~~i~~d~~G~l-~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~-------------------~~~~~i~~s~dg~~  192 (326)
T 2ghs_A          135 RSNDGRMHPSGAL-WIGTMGRKAETGAGSIYHVA--KGKVTKLFADI-------------------SIPNSICFSPDGTT  192 (326)
T ss_dssp             EEEEEEECTTSCE-EEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE-------------------SSEEEEEECTTSCE
T ss_pred             CCCCEEECCCCCE-EEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC-------------------cccCCeEEcCCCCE
Confidence            3578899999984 33332        4688877  35554443211                   13457899999998


Q ss_pred             EEEEE
Q psy7767         169 LAYMK  173 (200)
Q Consensus       169 Laf~r  173 (200)
                      |++..
T Consensus       193 lyv~~  197 (326)
T 2ghs_A          193 GYFVD  197 (326)
T ss_dssp             EEEEE
T ss_pred             EEEEE
Confidence            87653

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=93.58  E-value=0.66  Score=43.09  Aligned_cols=72  Identities=11%  Similarity=0.019  Sum_probs=44.7

Q ss_pred             eeecCCCCCceeeEECcCCCEEEEEE-cCcEEEEECC--CCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEc-
Q psy7767          89 VSDLDGSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDD--FRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS-  163 (200)
Q Consensus        89 v~~lt~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~--~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS-  163 (200)
                      +.++..+.....+.+||||+++.... ++.|.+.++.  +++.. +|.. |.                   ...++.+| 
T Consensus       190 ~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~-------------------~P~~ia~s~  249 (567)
T 1qks_A          190 KTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GS-------------------EARSIETSK  249 (567)
T ss_dssp             EEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CS-------------------EEEEEEECC
T ss_pred             EEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CC-------------------CCceeEEcc
Confidence            33454555667899999999864433 3469999885  44433 2222 21                   23467899 


Q ss_pred             ---cCCCEEEEEEEcCCcce
Q psy7767         164 ---PDGSILAYMKFNDARVH  180 (200)
Q Consensus       164 ---PDGk~Laf~r~D~s~v~  180 (200)
                         |||++|+........+.
T Consensus       250 ~~~pDGk~l~v~n~~~~~v~  269 (567)
T 1qks_A          250 MEGWEDKYAIAGAYWPPQYV  269 (567)
T ss_dssp             STTCTTTEEEEEEEETTEEE
T ss_pred             ccCCCCCEEEEEEccCCeEE
Confidence               79998866555444443

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=93.58  E-value=0.35  Score=44.48  Aligned_cols=69  Identities=16%  Similarity=0.005  Sum_probs=47.8

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|+-.. ++.|.+.++.++...+......                  +....+.|||||+.|+-. 
T Consensus       430 ~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~------------------~~v~~~~~s~~~~~l~s~-  490 (694)
T 3dm0_A          430 SHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT------------------KDVLSVAFSLDNRQIVSA-  490 (694)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS------------------SCEEEEEECTTSSCEEEE-
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCC------------------CCEEEEEEeCCCCEEEEE-
Confidence            46688999999999988775 5789999998776543332111                  123468899999988644 


Q ss_pred             EcCCcceEE
Q psy7767         174 FNDARVHNM  182 (200)
Q Consensus       174 ~D~s~v~~~  182 (200)
                      ..++.+..+
T Consensus       491 s~D~~i~iw  499 (694)
T 3dm0_A          491 SRDRTIKLW  499 (694)
T ss_dssp             ETTSCEEEE
T ss_pred             eCCCEEEEE
Confidence            444555554

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=93.41  E-value=0.7  Score=37.20  Aligned_cols=70  Identities=10%  Similarity=-0.108  Sum_probs=47.7

Q ss_pred             CceeeE----ECcCCCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc---CCCE
Q psy7767          97 FLQLVQ----WSPVGHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP---DGSI  168 (200)
Q Consensus        97 ~is~~~----wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP---DGk~  168 (200)
                      .+..+.    |+|+|+.++.... +.|.+.++.++..........                   ....+.|+|   ||+.
T Consensus       166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~~~~  226 (357)
T 3i2n_A          166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKN-------------------GVCSLEFDRKDISMNK  226 (357)
T ss_dssp             CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSS-------------------CEEEEEESCSSSSCCE
T ss_pred             ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCC-------------------ceEEEEcCCCCCCCCE
Confidence            455555    8999999998875 789999998777654433221                   335789999   9988


Q ss_pred             EEEEEEcCCcceEEEEEe
Q psy7767         169 LAYMKFNDARVHNMSYIH  186 (200)
Q Consensus       169 Laf~r~D~s~v~~~~i~~  186 (200)
                      |+.. ..++.+..+.+..
T Consensus       227 l~~~-~~dg~i~i~d~~~  243 (357)
T 3i2n_A          227 LVAT-SLEGKFHVFDMRT  243 (357)
T ss_dssp             EEEE-ESTTEEEEEEEEE
T ss_pred             EEEE-CCCCeEEEEeCcC
Confidence            7654 5556676666543

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=93.28  E-value=0.41  Score=38.97  Aligned_cols=75  Identities=20%  Similarity=0.178  Sum_probs=46.3

Q ss_pred             CCCceeeEECcCC---CEEEEEE-cCcEEEEECCCCC---eEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767          95 SNFLQLVQWSPVG---HDLIFVK-DNNLYQAYDDFRS---INALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS  167 (200)
Q Consensus        95 ~~~is~~~wSPDG---k~IAFV~-~gdLyv~~~~~g~---~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk  167 (200)
                      ...+..++|||+|   +.||-.. ++.|.+.+++.+.   ...+....       +.+         +....+.|||||+
T Consensus       204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~-------~~~---------~~v~~~~~s~~g~  267 (297)
T 2pm7_B          204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEE-------KFP---------DVLWRASWSLSGN  267 (297)
T ss_dssp             SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSS-------CCS---------SCEEEEEECSSSC
T ss_pred             CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecc-------cCC---------CcEEEEEECCCCC
Confidence            4567999999996   6666654 5678887776532   11222100       001         1234679999999


Q ss_pred             EEEEEEEcCCcceEEEEEe
Q psy7767         168 ILAYMKFNDARVHNMSYIH  186 (200)
Q Consensus       168 ~Laf~r~D~s~v~~~~i~~  186 (200)
                      .||-. ..++.+..+....
T Consensus       268 ~las~-~~D~~v~lw~~~~  285 (297)
T 2pm7_B          268 VLALS-GGDNKVTLWKENL  285 (297)
T ss_dssp             CEEEE-ETTSCEEEEEECT
T ss_pred             EEEEE-cCCCcEEEEEECC
Confidence            98754 5556677776543

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=93.23  E-value=0.4  Score=39.84  Aligned_cols=71  Identities=8%  Similarity=0.120  Sum_probs=46.5

Q ss_pred             CCCceeeEECcCC-CEEEEEE-cCcEEEEECCCCCeEEEeeC-CCcceEecccccceeeeeeeCCCcceEEcc-CCCEEE
Q psy7767          95 SNFLQLVQWSPVG-HDLIFVK-DNNLYQAYDDFRSINALTRD-GIKGVLFNGVADWVYEEEVFSSTKTLWFSP-DGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDG-k~IAFV~-~gdLyv~~~~~g~~~rLT~d-g~~~~~~nG~pdwv~eEEi~~~~~~~~WSP-DGk~La  170 (200)
                      ...+..++|+||| +.|+... ++.|.+.++.++........ +..                 +....+.||| ||+.|+
T Consensus        73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~-----------------~~v~~~~~~~~~~~~l~  135 (383)
T 3ei3_B           73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPG-----------------DAITGMKFNQFNTNQLF  135 (383)
T ss_dssp             SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTT-----------------CBEEEEEEETTEEEEEE
T ss_pred             CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcC-----------------CceeEEEeCCCCCCEEE
Confidence            4678999999999 7777765 57899999987766544431 210                 1234688999 555554


Q ss_pred             EEEEcCCcceEEE
Q psy7767         171 YMKFNDARVHNMS  183 (200)
Q Consensus       171 f~r~D~s~v~~~~  183 (200)
                       ....++.+..+.
T Consensus       136 -s~~~d~~i~iwd  147 (383)
T 3ei3_B          136 -VSSIRGATTLRD  147 (383)
T ss_dssp             -EEETTTEEEEEE
T ss_pred             -EEeCCCEEEEEE
Confidence             445555555543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=93.16  E-value=0.42  Score=38.59  Aligned_cols=64  Identities=23%  Similarity=0.311  Sum_probs=37.2

Q ss_pred             ceeeEECcCCCEEEEEE-------------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767          98 LQLVQWSPVGHDLIFVK-------------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTK  158 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~-------------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~  158 (200)
                      ..+++++|||+.. ++-                   .+.||..+.+ +....+....                   ....
T Consensus       117 ~~~i~~d~~G~l~-vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-------------------~~~~  175 (296)
T 3e5z_A          117 PNDVCLAPDGSLW-FSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-------------------VKPN  175 (296)
T ss_dssp             CCCEEECTTSCEE-EEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-------------------SSEE
T ss_pred             CCCEEECCCCCEE-EECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-------------------CCCc
Confidence            4568889998733 321                   2467777655 4444443211                   2345


Q ss_pred             ceEEccCCCEEEEEEEcCCcceEEE
Q psy7767         159 TLWFSPDGSILAYMKFNDARVHNMS  183 (200)
Q Consensus       159 ~~~WSPDGk~Laf~r~D~s~v~~~~  183 (200)
                      ++.|||||+.| +.......+..+.
T Consensus       176 gi~~s~dg~~l-v~~~~~~~i~~~~  199 (296)
T 3e5z_A          176 GLAFLPSGNLL-VSDTGDNATHRYC  199 (296)
T ss_dssp             EEEECTTSCEE-EEETTTTEEEEEE
T ss_pred             cEEECCCCCEE-EEeCCCCeEEEEE
Confidence            78999999988 6544334444443

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=93.14  E-value=0.25  Score=40.56  Aligned_cols=34  Identities=12%  Similarity=0.008  Sum_probs=28.2

Q ss_pred             CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCe
Q psy7767          95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSI  128 (200)
Q Consensus        95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~  128 (200)
                      ...+..++|+| ||+.|+... ++.|.+.+++++..
T Consensus        43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~   78 (408)
T 4a11_B           43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSR   78 (408)
T ss_dssp             SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSS
T ss_pred             CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcc
Confidence            56789999999 999998886 67899999887653

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=93.14  E-value=0.38  Score=41.12  Aligned_cols=51  Identities=14%  Similarity=0.041  Sum_probs=31.5

Q ss_pred             cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767         115 DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       115 ~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      ++.|.+.++..+..........                  ....++.|||||++||... + .++-.+.+.
T Consensus       338 Dg~V~lwd~~~~~~~~~~~~~~------------------~~V~svafspdG~~LA~as-~-~Gv~lvrL~  388 (393)
T 4gq1_A          338 HGLIQLINTYEKDSNSIPIQLG------------------MPIVDFCWHQDGSHLAIAT-E-GSVLLTRLM  388 (393)
T ss_dssp             TTEEEEEETTCTTCCEEEEECS------------------SCEEEEEECTTSSEEEEEE-S-SEEEEEEEG
T ss_pred             CCEEEEEECCCCcEEEEecCCC------------------CcEEEEEEcCCCCEEEEEe-C-CCeEEEEEe
Confidence            4678888887765543322111                  1235789999999998763 3 345555543

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=93.08  E-value=0.42  Score=40.00  Aligned_cols=33  Identities=12%  Similarity=0.231  Sum_probs=26.0

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCe
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSI  128 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~  128 (200)
                      +.....++++|||+.| |+.++.|++.+.++++.
T Consensus       224 g~~p~~la~~~d~~~l-yv~~~~v~~~d~~t~~~  256 (328)
T 3dsm_A          224 GDWPSEVQLNGTRDTL-YWINNDIWRMPVEADRV  256 (328)
T ss_dssp             TCCCEEEEECTTSCEE-EEESSSEEEEETTCSSC
T ss_pred             CCCceeEEEecCCCEE-EEEccEEEEEECCCCce
Confidence            4467889999999986 55566999999887664

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=93.05  E-value=0.29  Score=40.22  Aligned_cols=56  Identities=18%  Similarity=0.236  Sum_probs=35.7

Q ss_pred             ceeeEECcCCCEEEEEE-------------------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCc
Q psy7767          98 LQLVQWSPVGHDLIFVK-------------------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTK  158 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~-------------------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~  158 (200)
                      ..+++++|||+ |.|+-                   .+.||..+.++++..+++  +                  +....
T Consensus       133 ~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~------------------~~~p~  191 (305)
T 3dr2_A          133 PNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D------------------LDHPN  191 (305)
T ss_dssp             CCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E------------------ESSEE
T ss_pred             CCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c------------------CCCCc
Confidence            45688889887 33320                   245777776666665554  1                  12445


Q ss_pred             ceEEccCCCEEEEEEE
Q psy7767         159 TLWFSPDGSILAYMKF  174 (200)
Q Consensus       159 ~~~WSPDGk~Laf~r~  174 (200)
                      ++.|||||+.|++.-.
T Consensus       192 gl~~spdg~~lyv~~~  207 (305)
T 3dr2_A          192 GLAFSPDEQTLYVSQT  207 (305)
T ss_dssp             EEEECTTSSEEEEEEC
T ss_pred             ceEEcCCCCEEEEEec
Confidence            7899999998865533

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=92.93  E-value=0.37  Score=39.50  Aligned_cols=65  Identities=17%  Similarity=0.235  Sum_probs=37.2

Q ss_pred             ceeeEECcCCCEEEEEE-c------------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          98 LQLVQWSPVGHDLIFVK-D------------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~-~------------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      ..+++++|||+ +.+.. +            +.||..+.+ +....+...                   +....++.|||
T Consensus       100 ~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~-------------------~~~pngi~~sp  158 (297)
T 3g4e_A          100 FNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQ-------------------VDISNGLDWSL  158 (297)
T ss_dssp             EEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEE-------------------ESBEEEEEECT
T ss_pred             CCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC-CCEEEEeec-------------------cccccceEEcC
Confidence            56788999998 44432 1            246666543 333333221                   12456789999


Q ss_pred             CCCEEEEEEEcCCcceEEE
Q psy7767         165 DGSILAYMKFNDARVHNMS  183 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~~~~  183 (200)
                      ||+.|++.-.....+..+.
T Consensus       159 dg~~lyv~~~~~~~i~~~~  177 (297)
T 3g4e_A          159 DHKIFYYIDSLSYSVDAFD  177 (297)
T ss_dssp             TSCEEEEEEGGGTEEEEEE
T ss_pred             CCCEEEEecCCCCcEEEEe
Confidence            9998866544444444443

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=92.88  E-value=0.4  Score=40.18  Aligned_cols=59  Identities=7%  Similarity=-0.015  Sum_probs=38.3

Q ss_pred             CCCCceeeEECcCCCEEEEEEc------------CcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcce
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVKD------------NNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTL  160 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~~------------gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~  160 (200)
                      .+.....+.++|||+ +.++..            +.|++.+.++++.. .+.-...                  ....++
T Consensus       170 ~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g------------------~~p~~l  230 (328)
T 3dsm_A          170 IGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG------------------DWPSEV  230 (328)
T ss_dssp             CSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT------------------CCCEEE
T ss_pred             cCCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC------------------CCceeE
Confidence            344557788999997 555543            35999988777654 2322110                  135678


Q ss_pred             EEccCCCEEEE
Q psy7767         161 WFSPDGSILAY  171 (200)
Q Consensus       161 ~WSPDGk~Laf  171 (200)
                      .+||||++|.+
T Consensus       231 a~~~d~~~lyv  241 (328)
T 3dsm_A          231 QLNGTRDTLYW  241 (328)
T ss_dssp             EECTTSCEEEE
T ss_pred             EEecCCCEEEE
Confidence            99999998754

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=92.83  E-value=0.19  Score=43.36  Aligned_cols=70  Identities=10%  Similarity=-0.017  Sum_probs=47.9

Q ss_pred             CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      .+..+.|+|||+.|+... ++.|.+.++++.....+....                   +....+.|+|+|+.++.....
T Consensus       211 ~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~-------------------~~v~~v~~~p~~~~~~~s~s~  271 (435)
T 4e54_B          211 WFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHK-------------------KKVTHVALNPCCDWFLATASV  271 (435)
T ss_dssp             CCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCS-------------------SCEEEEEECTTCSSEEEEEET
T ss_pred             cEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEeccc-------------------ceEEeeeecCCCceEEEEecC
Confidence            356789999999988764 568999988654332222110                   123468999999987777777


Q ss_pred             CCcceEEEEE
Q psy7767         176 DARVHNMSYI  185 (200)
Q Consensus       176 ~s~v~~~~i~  185 (200)
                      ++.+.++.+.
T Consensus       272 d~~v~iwd~~  281 (435)
T 4e54_B          272 DQTVKIWDLR  281 (435)
T ss_dssp             TSBCCEEETT
T ss_pred             cceeeEEecc
Confidence            7777777543

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=92.82  E-value=0.47  Score=42.50  Aligned_cols=70  Identities=11%  Similarity=0.051  Sum_probs=40.9

Q ss_pred             eecCCCCCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCC
Q psy7767          90 SDLDGSNFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSST  157 (200)
Q Consensus        90 ~~lt~~~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~  157 (200)
                      ..+..+.... +++||||+++....           .+.|.+.|..+++.. .|.-.+.+.. .-|           ...
T Consensus        73 ~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~-~~g-----------~~P  139 (386)
T 3sjl_D           73 GMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRF-LVG-----------TYP  139 (386)
T ss_dssp             EEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC-CBS-----------CCG
T ss_pred             EEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccc-ccC-----------CCC
Confidence            3343343444 99999999975443           235888888877654 3322110000 000           145


Q ss_pred             cceEEccCCCEEEEE
Q psy7767         158 KTLWFSPDGSILAYM  172 (200)
Q Consensus       158 ~~~~WSPDGk~Laf~  172 (200)
                      ..+.+||||++|...
T Consensus       140 ~~~a~spDGk~lyVa  154 (386)
T 3sjl_D          140 WMTSLTPDGKTLLFY  154 (386)
T ss_dssp             GGEEECTTSSEEEEE
T ss_pred             ceEEEcCCCCEEEEE
Confidence            678999999987544

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=92.71  E-value=0.53  Score=37.13  Aligned_cols=68  Identities=12%  Similarity=0.024  Sum_probs=43.3

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ...+..+.|+|+|+.++-..++.|.+.++..++..+......                  +....+.|+|||+ |+ ...
T Consensus       184 ~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~-l~-~~~  243 (313)
T 3odt_A          184 NDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHE------------------SFVYCIKLLPNGD-IV-SCG  243 (313)
T ss_dssp             SSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS------------------SCEEEEEECTTSC-EE-EEE
T ss_pred             cccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCC------------------ceEEEEEEecCCC-EE-EEe
Confidence            466799999999993333346789999998776554333111                  1234688999994 54 334


Q ss_pred             cCCcceEE
Q psy7767         175 NDARVHNM  182 (200)
Q Consensus       175 D~s~v~~~  182 (200)
                      .++.+..+
T Consensus       244 ~dg~v~iw  251 (313)
T 3odt_A          244 EDRTVRIW  251 (313)
T ss_dssp             TTSEEEEE
T ss_pred             cCCEEEEE
Confidence            44444444

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=92.60  E-value=0.48  Score=38.61  Aligned_cols=37  Identities=14%  Similarity=0.285  Sum_probs=27.5

Q ss_pred             CCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEee
Q psy7767          96 NFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTR  133 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~  133 (200)
                      .....++|+|||+ |.++.  ++.|++.+.++++..++..
T Consensus        45 ~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~~~   83 (333)
T 2dg1_A           45 LQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPFV   83 (333)
T ss_dssp             CCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred             ccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEEee
Confidence            3457899999998 54443  4679999988888776653

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=92.44  E-value=0.68  Score=38.05  Aligned_cols=71  Identities=20%  Similarity=0.181  Sum_probs=45.2

Q ss_pred             CCCceeeEECcCC----CEEEEEE-cCcEEEEECCCCCe-----EEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          95 SNFLQLVQWSPVG----HDLIFVK-DNNLYQAYDDFRSI-----NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        95 ~~~is~~~wSPDG----k~IAFV~-~gdLyv~~~~~g~~-----~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      ...+..++|+|+|    +.||-.. ++.|.+.++++...     ..+..          ..         +....+.|||
T Consensus       212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~----------~~---------~~v~~v~~sp  272 (316)
T 3bg1_A          212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHK----------FN---------DVVWHVSWSI  272 (316)
T ss_dssp             SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEE----------CS---------SCEEEEEECT
T ss_pred             CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhc----------CC---------CcEEEEEEcC
Confidence            3557899999997    6676654 56788888765211     11111          00         1234689999


Q ss_pred             CCCEEEEEEEcCCcceEEEEE
Q psy7767         165 DGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~~~~i~  185 (200)
                      ||+.||.. ..++.+..+...
T Consensus       273 ~g~~las~-~~D~~v~lw~~~  292 (316)
T 3bg1_A          273 TANILAVS-GGDNKVTLWKES  292 (316)
T ss_dssp             TTCCEEEE-ESSSCEEEEEEC
T ss_pred             CCCEEEEE-cCCCeEEEEEEC
Confidence            99988755 455667777654

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=92.39  E-value=1.9  Score=35.22  Aligned_cols=73  Identities=12%  Similarity=-0.014  Sum_probs=48.4

Q ss_pred             CCCCceeeEECcCC---CEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          94 GSNFLQLVQWSPVG---HDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        94 ~~~~is~~~wSPDG---k~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ....+....++|++   +.++... ++.|.+.++..+..........                  +....+.|+|||++|
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l  201 (408)
T 4a11_B          140 FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR------------------QEILAVSWSPRYDYI  201 (408)
T ss_dssp             CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC------------------SCEEEEEECSSCTTE
T ss_pred             CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC------------------CcEEEEEECCCCCcE
Confidence            34567888888854   4666664 5689999988765433222111                  123578999999987


Q ss_pred             EEEEEcCCcceEEEE
Q psy7767         170 AYMKFNDARVHNMSY  184 (200)
Q Consensus       170 af~r~D~s~v~~~~i  184 (200)
                      ++....++.+..+.+
T Consensus       202 l~~~~~dg~i~i~d~  216 (408)
T 4a11_B          202 LATASADSRVKLWDV  216 (408)
T ss_dssp             EEEEETTSCEEEEET
T ss_pred             EEEEcCCCcEEEEEC
Confidence            667777777777665

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=92.39  E-value=2  Score=36.78  Aligned_cols=72  Identities=7%  Similarity=-0.046  Sum_probs=45.1

Q ss_pred             CCCceeeEECc-CCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|+| ||+.|+-.. ++.|-+.++.++....+.......                .....+.|+|||+.|+..
T Consensus       164 ~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~g  227 (435)
T 4e54_B          164 GGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTIN----------------IWFCSLDVSASSRMVVTG  227 (435)
T ss_dssp             SCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCS----------------CCCCCEEEETTTTEEEEE
T ss_pred             CCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCC----------------ccEEEEEECCCCCEEEEE
Confidence            46789999999 577765443 567888898765544443322100                124568899999987643


Q ss_pred             EEcCCcceEEE
Q psy7767         173 KFNDARVHNMS  183 (200)
Q Consensus       173 r~D~s~v~~~~  183 (200)
                       ..++.+..+.
T Consensus       228 -~~dg~i~~wd  237 (435)
T 4e54_B          228 -DNVGNVILLN  237 (435)
T ss_dssp             -CSSSBEEEEE
T ss_pred             -eCCCcEeeec
Confidence             4444454443

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=92.05  E-value=1.3  Score=37.97  Aligned_cols=70  Identities=14%  Similarity=0.078  Sum_probs=46.7

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|+|+.|+-.. ++.|.+.++.++...+......         .         ....+.|+|||+.|+- .
T Consensus       192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~---------~---------~v~~~~~~~~g~~l~s-~  252 (410)
T 1vyh_C          192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR---------E---------WVRMVRPNQDGTLIAS-C  252 (410)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS---------S---------CEEEEEECTTSSEEEE-E
T ss_pred             CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC---------c---------cEEEEEECCCCCEEEE-E
Confidence            45689999999999987765 5679999998776543222111         1         2245789999987754 4


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      ..++.+..+.
T Consensus       253 s~D~~v~vwd  262 (410)
T 1vyh_C          253 SNDQTVRVWV  262 (410)
T ss_dssp             ETTSCEEEEE
T ss_pred             cCCCeEEEEE
Confidence            4455555553

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=91.89  E-value=4.4  Score=32.93  Aligned_cols=38  Identities=11%  Similarity=-0.039  Sum_probs=28.9

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEee
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTR  133 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~  133 (200)
                      ...+..++++|||+. ....++.|++.+.++++...+..
T Consensus        53 ~~~~~~i~~~~dG~l-~v~~~~~l~~~d~~~g~~~~~~~   90 (297)
T 3g4e_A           53 DAPVSSVALRQSGGY-VATIGTKFCALNWKEQSAVVLAT   90 (297)
T ss_dssp             SSCEEEEEEBTTSSE-EEEETTEEEEEETTTTEEEEEEE
T ss_pred             CCceEEEEECCCCCE-EEEECCeEEEEECCCCcEEEEEe
Confidence            456788899999994 44457789999988887766654

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=91.78  E-value=0.72  Score=37.16  Aligned_cols=70  Identities=11%  Similarity=-0.015  Sum_probs=45.5

Q ss_pred             CCCceeeEECcC----CCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc-CCCE
Q psy7767          95 SNFLQLVQWSPV----GHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP-DGSI  168 (200)
Q Consensus        95 ~~~is~~~wSPD----Gk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP-DGk~  168 (200)
                      ...+..++|+|+    |+.|+... ++.|.+.++.+++..+......                  +....+.|+| ||+.
T Consensus        69 ~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~------------------~~i~~~~~~~~~~~~  130 (366)
T 3k26_A           69 DENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG------------------NAINELKFHPRDPNL  130 (366)
T ss_dssp             TCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC------------------SCEEEEEECSSCTTE
T ss_pred             CCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC------------------CcEEEEEECCCCCCE
Confidence            356899999999    55666654 5679999988776654333111                  1345789999 8887


Q ss_pred             EEEEEEcCCcceEEE
Q psy7767         169 LAYMKFNDARVHNMS  183 (200)
Q Consensus       169 Laf~r~D~s~v~~~~  183 (200)
                      |+. ...++.+..+.
T Consensus       131 l~s-~~~dg~i~iwd  144 (366)
T 3k26_A          131 LLS-VSKDHALRLWN  144 (366)
T ss_dssp             EEE-EETTSCEEEEE
T ss_pred             EEE-EeCCCeEEEEE
Confidence            754 44455555543

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=91.65  E-value=0.31  Score=40.77  Aligned_cols=35  Identities=6%  Similarity=-0.033  Sum_probs=27.8

Q ss_pred             ceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEe
Q psy7767          98 LQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALT  132 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT  132 (200)
                      ...|.|+||++.+.|+-  ++.|+..+.+++....++
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~   87 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA   87 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence            46899999999998885  568999998877665554

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=91.53  E-value=0.43  Score=42.15  Aligned_cols=63  Identities=10%  Similarity=0.081  Sum_probs=40.3

Q ss_pred             eEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767         101 VQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus       101 ~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ..++|||+++.....          +.+.+.|+.+.+..+-...|.                   ...++.|+|||++|+
T Consensus       269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-------------------~p~gi~~s~Dg~~l~  329 (368)
T 1mda_H          269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-------------------DSDAIIAAQDGASDN  329 (368)
T ss_dssp             EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-------------------EECEEEECCSSSCEE
T ss_pred             eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-------------------CcceEEECCCCCEEE
Confidence            679999999755432          256688887765532222111                   345789999999988


Q ss_pred             EEEE-cCCcceEE
Q psy7767         171 YMKF-NDARVHNM  182 (200)
Q Consensus       171 f~r~-D~s~v~~~  182 (200)
                      +... ..+.+..+
T Consensus       330 va~~~~~~~VsVI  342 (368)
T 1mda_H          330 YANSAGTEVLDIY  342 (368)
T ss_dssp             EEEETTTTEEEEE
T ss_pred             EEccCCCCeEEEE
Confidence            7765 34444433

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=91.47  E-value=0.73  Score=38.73  Aligned_cols=33  Identities=12%  Similarity=-0.088  Sum_probs=25.3

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCC
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRS  127 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~  127 (200)
                      ...+..++|||||+.||-..++.+.+.+++.+.
T Consensus        19 ~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~   51 (355)
T 3vu4_A           19 SNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVA   51 (355)
T ss_dssp             CCCCCEEEECTTSSEEEEECSSEEEEEEETTEE
T ss_pred             CCceEEEEECCCCCEEEEEcCCEEEEEecCCcc
Confidence            467899999999999987766666666666443

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=91.39  E-value=2.1  Score=39.00  Aligned_cols=77  Identities=6%  Similarity=-0.097  Sum_probs=46.4

Q ss_pred             eecCCCCCceeeEECc----CCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEc
Q psy7767          90 SDLDGSNFLQLVQWSP----VGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFS  163 (200)
Q Consensus        90 ~~lt~~~~is~~~wSP----DGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WS  163 (200)
                      ..+..+.....+++||    ||++++...  .+.|.+.+..+++..+........  ..+ ..+.  .+  .+..++.+|
T Consensus       216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~--~~~-~~~~--~~--~~v~~i~~s  288 (543)
T 1nir_A          216 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT--VDT-QTYH--PE--PRVAAIIAS  288 (543)
T ss_dssp             EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC--SSS-CCEE--SC--CCEEEEEEC
T ss_pred             EEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcc--cCc-cccc--cC--CceEEEEEC
Confidence            3444566678999999    999986664  578989998887765444322100  000 0000  00  134578899


Q ss_pred             cCCCEEEEEE
Q psy7767         164 PDGSILAYMK  173 (200)
Q Consensus       164 PDGk~Laf~r  173 (200)
                      |||+.+++.-
T Consensus       289 ~~~~~~~vs~  298 (543)
T 1nir_A          289 HEHPEFIVNV  298 (543)
T ss_dssp             SSSSEEEEEE
T ss_pred             CCCCEEEEEE
Confidence            9998775543

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=91.31  E-value=0.86  Score=36.48  Aligned_cols=57  Identities=21%  Similarity=0.085  Sum_probs=39.2

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ...+..++|+|||+.|+-.. ++.|.+.++..+........+.                   ....+.|+|++..|+
T Consensus       215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-------------------~v~~~~~~~~~~~~~  272 (340)
T 4aow_A          215 TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-------------------IINALCFSPNRYWLC  272 (340)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-------------------CEEEEEECSSSSEEE
T ss_pred             CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-------------------eEEeeecCCCCceee
Confidence            45678899999999987764 5789999988665543333221                   234578999886554

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=91.24  E-value=3.4  Score=36.51  Aligned_cols=69  Identities=12%  Similarity=0.067  Sum_probs=39.6

Q ss_pred             CceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ....++++|++..|.++.  ++.|++.+.+++...++...+.                 .....++.|+|||++|.++-.
T Consensus       227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-----------------~~~P~gia~~pdG~~lyv~d~  289 (430)
T 3tc9_A          227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-----------------SGWEFHIQFHPSGNYAYIVVV  289 (430)
T ss_dssp             SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-----------------SSCCEEEEECTTSSEEEEEET
T ss_pred             CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-----------------CCcceeEEEcCCCCEEEEEEC
Confidence            446677888555554443  3567777776555433333221                 013567899999997765533


Q ss_pred             cCCcceEE
Q psy7767         175 NDARVHNM  182 (200)
Q Consensus       175 D~s~v~~~  182 (200)
                      ....+..+
T Consensus       290 ~~~~I~~~  297 (430)
T 3tc9_A          290 NQHYILRS  297 (430)
T ss_dssp             TTTEEEEE
T ss_pred             CCCEEEEE
Confidence            33334333

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=91.17  E-value=0.78  Score=37.25  Aligned_cols=70  Identities=16%  Similarity=0.109  Sum_probs=43.7

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCe---EEEeeCCCcceEecccccceeeeeeeCCCcceEEccC--CCE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSI---NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD--GSI  168 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~---~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD--Gk~  168 (200)
                      ...+..++|||||+.||-.. ++.|.+.+++++..   ..+.  |        ..         +....+.|+|+  |+.
T Consensus         9 ~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~--g--------H~---------~~V~~v~~s~~~~g~~   69 (297)
T 2pm7_B            9 NEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT--G--------HE---------GPVWRVDWAHPKFGTI   69 (297)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC--C--------CS---------SCEEEEEECCGGGCSE
T ss_pred             cCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc--c--------cc---------CCeEEEEecCCCcCCE
Confidence            45678999999999988775 56788888764322   1221  1        10         12346789874  776


Q ss_pred             EEEEEEcCCcceEEEE
Q psy7767         169 LAYMKFNDARVHNMSY  184 (200)
Q Consensus       169 Laf~r~D~s~v~~~~i  184 (200)
                      |+ ....++.+.++.+
T Consensus        70 l~-s~s~D~~v~iWd~   84 (297)
T 2pm7_B           70 LA-SCSYDGKVMIWKE   84 (297)
T ss_dssp             EE-EEETTTEEEEEEB
T ss_pred             EE-EEcCCCEEEEEEc
Confidence            65 4455555665544

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=91.16  E-value=1  Score=37.40  Aligned_cols=55  Identities=15%  Similarity=0.164  Sum_probs=35.7

Q ss_pred             CCceeeEECcCCCEEEEEEcC-------------------------cEEEEECCCCCeEEEeeCCCcceEecccccceee
Q psy7767          96 NFLQLVQWSPVGHDLIFVKDN-------------------------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYE  150 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~g-------------------------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~e  150 (200)
                      +.+..++++|||+.++--.++                         .|++.+.++|+..+....+.              
T Consensus        24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~--------------   89 (329)
T 3fvz_A           24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL--------------   89 (329)
T ss_dssp             SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT--------------
T ss_pred             CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc--------------
Confidence            457888999999876544444                         48888777666543322111              


Q ss_pred             eeeeCCCcceEEccCCC
Q psy7767         151 EEVFSSTKTLWFSPDGS  167 (200)
Q Consensus       151 EEi~~~~~~~~WSPDGk  167 (200)
                         +....++.++|||+
T Consensus        90 ---~~~p~gia~d~~g~  103 (329)
T 3fvz_A           90 ---FYLPHGLSIDTDGN  103 (329)
T ss_dssp             ---CSSEEEEEECTTSC
T ss_pred             ---cCCceEEEECCCCC
Confidence               23456788999998

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=90.79  E-value=0.49  Score=42.76  Aligned_cols=65  Identities=11%  Similarity=0.048  Sum_probs=40.9

Q ss_pred             eeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767          99 QLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS  167 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk  167 (200)
                      ....++|||+++....           .++|.+.|+.+.+..+-..-|.                   ...++.|+|||+
T Consensus       322 ~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-------------------~P~gia~spDg~  382 (426)
T 3c75_H          322 QQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-------------------EIDSINVSQDAE  382 (426)
T ss_dssp             SCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-------------------EECEEEECCSSS
T ss_pred             eeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-------------------CcCeEEEccCCC
Confidence            3468999999864443           1369999988776542222121                   245789999999


Q ss_pred             EEEEEEE-cCCcceEE
Q psy7767         168 ILAYMKF-NDARVHNM  182 (200)
Q Consensus       168 ~Laf~r~-D~s~v~~~  182 (200)
                      .++|+.. .++.+.++
T Consensus       383 ~~lyv~n~~s~~VsVI  398 (426)
T 3c75_H          383 PLLYALSAGTQTLHIY  398 (426)
T ss_dssp             CEEEEEETTTTEEEEE
T ss_pred             EEEEEEcCCCCeEEEE
Confidence            6667755 34444433

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=90.02  E-value=1.9  Score=34.45  Aligned_cols=58  Identities=17%  Similarity=0.131  Sum_probs=33.0

Q ss_pred             CceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....++++|+++.|.++-.    +.|++.++++...+.+...+                  +....++.++|||++|.+.
T Consensus       123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~------------------~~~P~gia~d~~~~~lyv~  184 (267)
T 1npe_A          123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDN------------------LGLPNGLTFDAFSSQLCWV  184 (267)
T ss_dssp             SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTT------------------CSCEEEEEEETTTTEEEEE
T ss_pred             CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECC------------------CCCCcEEEEcCCCCEEEEE
Confidence            3456677787776655532    35666666543333332211                  1245678888988877554

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=90.00  E-value=0.53  Score=40.17  Aligned_cols=72  Identities=11%  Similarity=0.009  Sum_probs=47.7

Q ss_pred             CCCceeeEECc--------CCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767          95 SNFLQLVQWSP--------VGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD  165 (200)
Q Consensus        95 ~~~is~~~wSP--------DGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD  165 (200)
                      ...+..++|||        ||+.||-.. ++.|.+.++..+..........                  +...++.|+|+
T Consensus       136 ~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~------------------~~v~~v~~~p~  197 (393)
T 4gq1_A          136 HNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLS------------------SPGISVQFRPS  197 (393)
T ss_dssp             SSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECS------------------SCEEEEEEETT
T ss_pred             CCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCC------------------CCcEEEEECCC
Confidence            46689999998        899998875 4568888876554432222111                  12246899999


Q ss_pred             CCEEEEEEEcCCcceEEEE
Q psy7767         166 GSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       166 Gk~Laf~r~D~s~v~~~~i  184 (200)
                      |..++.....++.+..+.+
T Consensus       198 ~~~~l~~~~~d~~v~~wd~  216 (393)
T 4gq1_A          198 NPNQLIVGERNGNIRIFDW  216 (393)
T ss_dssp             EEEEEEEEETTSEEEEEET
T ss_pred             CCceEEecCCCCEEEEEEC
Confidence            9766556666666766643

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=89.63  E-value=0.66  Score=42.37  Aligned_cols=65  Identities=12%  Similarity=0.040  Sum_probs=41.5

Q ss_pred             CceeeEECcCCCEEEEEEc-CcEEEEECCCCCe-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSI-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      .+..++|||||+.++-... +.|.+.++..+.. ..+....                   +...++.|||||+.|+- ..
T Consensus       357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~-------------------~~V~sva~Sp~g~~l~S-gs  416 (524)
T 2j04_B          357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE-------------------TTITAIGVSRLHPMVLA-GS  416 (524)
T ss_dssp             SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS-------------------SCEEEEECCSSCCBCEE-EE
T ss_pred             cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC-------------------CceEEEEeCCCCCeEEE-EE
Confidence            3677899999998766543 3588888776653 3333211                   13357899999998764 44


Q ss_pred             cCCcceE
Q psy7767         175 NDARVHN  181 (200)
Q Consensus       175 D~s~v~~  181 (200)
                      .++.+..
T Consensus       417 ~Dgtv~l  423 (524)
T 2j04_B          417 ADGSLII  423 (524)
T ss_dssp             TTTEEEC
T ss_pred             CCCEEEE
Confidence            4444443

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=89.35  E-value=1.1  Score=37.76  Aligned_cols=72  Identities=17%  Similarity=0.061  Sum_probs=47.6

Q ss_pred             CCCceeeEECc-CCCEEEEEE-cCcEEEEECCC---CCeE--EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767          95 SNFLQLVQWSP-VGHDLIFVK-DNNLYQAYDDF---RSIN--ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS  167 (200)
Q Consensus        95 ~~~is~~~wSP-DGk~IAFV~-~gdLyv~~~~~---g~~~--rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk  167 (200)
                      ...+..++|+| ||+.||-.. ++.|.+.++.+   +...  .++....                  +....+.|+|||+
T Consensus        63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~  124 (437)
T 3gre_A           63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCS------------------STVTQITMIPNFD  124 (437)
T ss_dssp             TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECS------------------SCEEEEEECTTSS
T ss_pred             CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCC------------------CCEEEEEEeCCCC
Confidence            46789999999 999998875 46788887764   3211  1110000                  1345789999999


Q ss_pred             EEEEEEEcCCcceEEEEE
Q psy7767         168 ILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       168 ~Laf~r~D~s~v~~~~i~  185 (200)
                      .|+ +...++.+..+.+.
T Consensus       125 ~l~-s~s~dg~i~vwd~~  141 (437)
T 3gre_A          125 AFA-VSSKDGQIIVLKVN  141 (437)
T ss_dssp             EEE-EEETTSEEEEEEEE
T ss_pred             EEE-EEeCCCEEEEEEec
Confidence            876 44556677777664

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=88.92  E-value=1.3  Score=41.50  Aligned_cols=73  Identities=14%  Similarity=0.077  Sum_probs=47.6

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccC--CCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD--GSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD--Gk~La  170 (200)
                      .+.+..++|||||+.|+... ++.|.+.++.++....+.. .+..                 +....+.|||+  |+.|+
T Consensus         9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~-----------------~~V~~l~~s~~~~~~~l~   71 (753)
T 3jro_A            9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE-----------------GPVWRVDWAHPKFGTILA   71 (753)
T ss_dssp             CCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCS-----------------SCEEEEEECCTTSCSEEE
T ss_pred             cceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCc-----------------CceEEEEecCCCCCCEEE
Confidence            46789999999999988875 5778888876544333322 1110                 13357889998  88776


Q ss_pred             EEEEcCCcceEEEEE
Q psy7767         171 YMKFNDARVHNMSYI  185 (200)
Q Consensus       171 f~r~D~s~v~~~~i~  185 (200)
                      .. ..++.+..+.+.
T Consensus        72 s~-s~Dg~I~vwd~~   85 (753)
T 3jro_A           72 SC-SYDGKVLIWKEE   85 (753)
T ss_dssp             EE-ETTSCEEEEEEE
T ss_pred             EE-eCCCeEEEEECC
Confidence            44 445556666543

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=88.51  E-value=1.3  Score=43.01  Aligned_cols=69  Identities=13%  Similarity=-0.023  Sum_probs=44.5

Q ss_pred             CCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....+..++|||||+.||-.. ++.|.+.+..+++...... ..                  .....+.||| |++|+- 
T Consensus        16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~------------------~~V~~l~fsp-g~~L~S-   74 (902)
T 2oaj_A           16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DR------------------SAIKEMRFVK-GIYLVV-   74 (902)
T ss_dssp             CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SC------------------CCEEEEEEET-TTEEEE-
T ss_pred             CCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CC------------------CCEEEEEEcC-CCEEEE-
Confidence            356789999999999998875 5688888776544332211 11                  1234688999 886654 


Q ss_pred             EEcCCcceEEE
Q psy7767         173 KFNDARVHNMS  183 (200)
Q Consensus       173 r~D~s~v~~~~  183 (200)
                      ..+++.+..+.
T Consensus        75 ~s~D~~v~lWd   85 (902)
T 2oaj_A           75 INAKDTVYVLS   85 (902)
T ss_dssp             EETTCEEEEEE
T ss_pred             EECcCeEEEEE
Confidence            34445555443

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=88.22  E-value=1.9  Score=39.89  Aligned_cols=72  Identities=15%  Similarity=-0.028  Sum_probs=40.0

Q ss_pred             CCceeeEECcCCCEEEEEEc--CcEEEEECCC-CCeE---EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVKD--NNLYQAYDDF-RSIN---ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~--gdLyv~~~~~-g~~~---rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ....++.+||||+.|.....  +.|.+.++.+ +..+   ++...|.     ...+++.....+-+....+..||||++|
T Consensus       321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~-----~~~~~~~~G~~~~ggPr~~~lSpDGk~L  395 (462)
T 2ece_A          321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGI-----FHRADHPAGHKLTGAPQMLEISRDGRRV  395 (462)
T ss_dssp             CCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTT-----TTCBCCTTSCCCCSCCCCEEECTTSSEE
T ss_pred             CceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCe-----eccccccccccCCCCCCEEEEcCCCCEE
Confidence            45688999999999754433  4788877753 2222   2222211     0001111001112346788999999988


Q ss_pred             EEE
Q psy7767         170 AYM  172 (200)
Q Consensus       170 af~  172 (200)
                      +..
T Consensus       396 yVa  398 (462)
T 2ece_A          396 YVT  398 (462)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            544

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=88.18  E-value=7.8  Score=32.93  Aligned_cols=57  Identities=7%  Similarity=0.041  Sum_probs=35.9

Q ss_pred             ceeeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          98 LQLVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+++.|++..|.++-.   +.|+..++++.....+..++                  +....++.++|++++|.++
T Consensus       161 P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~------------------~~~PnGla~d~~~~~lY~a  220 (349)
T 3v64_C          161 PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH------------------LFWPNGLTIDYAGRRMYWV  220 (349)
T ss_dssp             EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSS------------------CSCEEEEEEETTTTEEEEE
T ss_pred             cceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECC------------------CCCcceEEEeCCCCEEEEE
Confidence            456678887777766643   34777776655444443322                  1345678999988888665

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=88.05  E-value=2.2  Score=34.95  Aligned_cols=33  Identities=12%  Similarity=0.012  Sum_probs=25.8

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCC
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRS  127 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~  127 (200)
                      ...+..++|+|||+.||-.. ++.|.+.++.++.
T Consensus        13 ~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~   46 (316)
T 3bg1_A           13 EDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG   46 (316)
T ss_dssp             -CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE
T ss_pred             cCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC
Confidence            45789999999999988775 4678888877654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=87.84  E-value=5  Score=32.88  Aligned_cols=34  Identities=15%  Similarity=0.207  Sum_probs=21.8

Q ss_pred             cCCCCCceeeEECcCCCEEEEEE--cCcEEEEECCCC
Q psy7767          92 LDGSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFR  126 (200)
Q Consensus        92 lt~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g  126 (200)
                      +..+.....++|+|+|+ |.++-  ++.|+..+.+++
T Consensus        28 ~p~~~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~   63 (306)
T 2p4o_A           28 FPVNTFLENLASAPDGT-IFVTNHEVGEIVSITPDGN   63 (306)
T ss_dssp             ECTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTCC
T ss_pred             CCCCCCcceEEECCCCC-EEEEeCCCCeEEEECCCCc
Confidence            33345567889999987 44442  357887776543

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=87.83  E-value=2.8  Score=35.25  Aligned_cols=70  Identities=3%  Similarity=-0.050  Sum_probs=44.2

Q ss_pred             CceeeE--ECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          97 FLQLVQ--WSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        97 ~is~~~--wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      .+..+.  ++|||+.|+... ++.|.+.++.+++..+.......                -+....+.|||||+.|+-. 
T Consensus       170 ~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~-  232 (437)
T 3gre_A          170 YAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR----------------HGAVSSICIDEECCVLILG-  232 (437)
T ss_dssp             CEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG----------------GCCEEEEEECTTSCEEEEE-
T ss_pred             CceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC----------------CCceEEEEECCCCCEEEEE-
Confidence            344444  778999988876 47899999987776544332100                0134578899999887644 


Q ss_pred             EcCCcceEEE
Q psy7767         174 FNDARVHNMS  183 (200)
Q Consensus       174 ~D~s~v~~~~  183 (200)
                      ..++.+..+.
T Consensus       233 ~~dg~i~iwd  242 (437)
T 3gre_A          233 TTRGIIDIWD  242 (437)
T ss_dssp             ETTSCEEEEE
T ss_pred             cCCCeEEEEE
Confidence            4445455543

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=87.20  E-value=2.6  Score=40.80  Aligned_cols=75  Identities=11%  Similarity=0.038  Sum_probs=48.3

Q ss_pred             CCCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEEEeeCCCcceEec-ccccceeeeeeeCCCcceEEc-----cCC-
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINALTRDGIKGVLFN-GVADWVYEEEVFSSTKTLWFS-----PDG-  166 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~dg~~~~~~n-G~pdwv~eEEi~~~~~~~~WS-----PDG-  166 (200)
                      ...+..++||||| .||.... +.|.+.+++++....-..-  ..  .. |...         ....+.||     ||| 
T Consensus       575 ~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~--~~--~~~gh~~---------~V~sv~Fs~~~~~~Dg~  640 (902)
T 2oaj_A          575 KGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENI--RE--ISGAQSA---------CVTCIEFVIMEYGDDGY  640 (902)
T ss_dssp             SCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEG--GG--TCSSCCC---------CEEEEEEEEEECTTSSS
T ss_pred             CCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeeh--hH--hcccccc---------ceEEEEEEEEecCCCCC
Confidence            5678999999999 9888864 5689999876544211010  00  00 2222         24578899     997 


Q ss_pred             --CEEEEEEEcCCcceEEEE
Q psy7767         167 --SILAYMKFNDARVHNMSY  184 (200)
Q Consensus       167 --k~Laf~r~D~s~v~~~~i  184 (200)
                        ++| +...+++.+..+.+
T Consensus       641 ~~~~l-~sgs~D~tv~~wd~  659 (902)
T 2oaj_A          641 SSILM-VCGTDMGEVITYKI  659 (902)
T ss_dssp             EEEEE-EEEETTSEEEEEEE
T ss_pred             cceEE-EEEecCCcEEEEEE
Confidence              455 46677777888876

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=86.90  E-value=4  Score=35.76  Aligned_cols=70  Identities=13%  Similarity=0.026  Sum_probs=42.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|+-.. ++.|.+.++. ++..+...... .. ..+.+         ....++.|+|++..|+...
T Consensus       192 ~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~-~~-~~~~~---------~~v~~v~w~~~~~~l~~~~  259 (434)
T 2oit_A          192 TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPP-FY-ESDHP---------VRVLDVLWIGTYVFAIVYA  259 (434)
T ss_dssp             GGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCT-TC-CTTSC---------EEEEEEEEEETTEEEEEEE
T ss_pred             CCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCc-cc-CCCCc---------eeEEEEEEecCceEEEEEc
Confidence            45688999999999998775 5689999887 44332221110 00 00000         0234789999998775544


Q ss_pred             EcC
Q psy7767         174 FND  176 (200)
Q Consensus       174 ~D~  176 (200)
                      ..+
T Consensus       260 ~~d  262 (434)
T 2oit_A          260 AAD  262 (434)
T ss_dssp             ETT
T ss_pred             cCC
Confidence            433

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=86.90  E-value=1.4  Score=40.88  Aligned_cols=61  Identities=15%  Similarity=0.078  Sum_probs=39.6

Q ss_pred             eeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767         100 LVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND  176 (200)
Q Consensus       100 ~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~  176 (200)
                      .+.|++|...++||.+   +.|.+.|.++++...-...|.                   ....+.+||||++| |+..++
T Consensus       158 ~~~~~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-------------------~p~~v~~SpDGr~l-yv~~~d  217 (567)
T 1qks_A          158 QQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-------------------AVHISRLSASGRYL-FVIGRD  217 (567)
T ss_dssp             SCCSCCCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-------------------CEEEEEECTTSCEE-EEEETT
T ss_pred             ccccccCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-------------------CccceEECCCCCEE-EEEcCC
Confidence            4567778666777764   589999998877653333332                   12367899999976 555544


Q ss_pred             Ccce
Q psy7767         177 ARVH  180 (200)
Q Consensus       177 s~v~  180 (200)
                      ..+.
T Consensus       218 g~V~  221 (567)
T 1qks_A          218 GKVN  221 (567)
T ss_dssp             SEEE
T ss_pred             CeEE
Confidence            4333

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=86.79  E-value=5.6  Score=34.38  Aligned_cols=58  Identities=7%  Similarity=0.021  Sum_probs=38.9

Q ss_pred             CceeeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....+++.|++..|.++-.   +.|+..++++.....+...+                  +....++.++|++++|.++
T Consensus       203 ~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~------------------~~~PnGlavd~~~~~lY~a  263 (386)
T 3v65_B          203 KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH------------------LFWPNGLTIDYAGRRMYWV  263 (386)
T ss_dssp             CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS------------------CSCEEEEEEEGGGTEEEEE
T ss_pred             CCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC------------------CCCeeeEEEeCCCCEEEEE
Confidence            3467788998888877653   45888887766555554332                  1245678888888887665

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=86.75  E-value=3.1  Score=38.95  Aligned_cols=72  Identities=15%  Similarity=0.239  Sum_probs=48.0

Q ss_pred             CCCceeeEECcC--CCEEEEEE-cCcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccC--CCE
Q psy7767          95 SNFLQLVQWSPV--GHDLIFVK-DNNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD--GSI  168 (200)
Q Consensus        95 ~~~is~~~wSPD--Gk~IAFV~-~gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD--Gk~  168 (200)
                      ...+..++|+|+  |+.|+... ++.|.+.++.++....+.. .+..                 +....+.|||+  |+.
T Consensus        53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~-----------------~~V~~v~~sp~~~~~~  115 (753)
T 3jro_A           53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHS-----------------ASVNSVQWAPHEYGPL  115 (753)
T ss_dssp             SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCS-----------------SCEEEEEECCGGGCSE
T ss_pred             cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCC-----------------CCeEEEEECCCCCCCE
Confidence            467899999998  99888876 5789999988775332222 1110                 13457899999  887


Q ss_pred             EEEEEEcCCcceEEEE
Q psy7767         169 LAYMKFNDARVHNMSY  184 (200)
Q Consensus       169 Laf~r~D~s~v~~~~i  184 (200)
                      |+.. ..++.+..+.+
T Consensus       116 l~sg-s~dg~I~vwdl  130 (753)
T 3jro_A          116 LLVA-SSDGKVSVVEF  130 (753)
T ss_dssp             EEEE-ETTSEEEEEEC
T ss_pred             EEEE-eCCCcEEEEEe
Confidence            7654 45555665554

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=86.64  E-value=2.8  Score=37.32  Aligned_cols=52  Identities=13%  Similarity=-0.029  Sum_probs=32.2

Q ss_pred             cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEE
Q psy7767         115 DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       115 ~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i  184 (200)
                      ++-|.+.++.+|+..+.-.....                 .....+.|||||++|+ ...+++.+.++.+
T Consensus       304 DgTIkIWDl~tGk~l~tL~gH~~-----------------~vvs~vafSPDG~~La-SGS~D~TIklWd~  355 (356)
T 2w18_A          304 SGTIAIWDLLLGQCTALLPPVSD-----------------QHWSFVKWSGTDSHLL-AGQKDGNIFVYHY  355 (356)
T ss_dssp             TSCEEEEETTTCSEEEEECCC-------------------CCCCEEEECSSSSEEE-EECTTSCEEEEEE
T ss_pred             CCcEEEEECCCCcEEEEecCCCC-----------------CeEEEEEECCCCCEEE-EEECCCcEEEecC
Confidence            56788888888775433221110                 0123478999999886 4456677777653

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=85.12  E-value=4.1  Score=33.98  Aligned_cols=88  Identities=8%  Similarity=0.065  Sum_probs=47.1

Q ss_pred             CCceeeEECcCCCEEEEE-----EcCcEEEEECCCCCeEEEeeC--CC----cceEecccccceeee--e---eeCCCcc
Q psy7767          96 NFLQLVQWSPVGHDLIFV-----KDNNLYQAYDDFRSINALTRD--GI----KGVLFNGVADWVYEE--E---VFSSTKT  159 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV-----~~gdLyv~~~~~g~~~rLT~d--g~----~~~~~nG~pdwv~eE--E---i~~~~~~  159 (200)
                      ....+++++|++..+.+.     ..+.|++.+.++++..++...  +.    ..+...|..-+....  .   +.....+
T Consensus       120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g  199 (343)
T 2qe8_A          120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG  199 (343)
T ss_dssp             CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred             cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence            345788999987765444     235799999988877765532  00    011112211000000  0   0012467


Q ss_pred             eEEccCCCEEEEEEEcCCcceEEEEE
Q psy7767         160 LWFSPDGSILAYMKFNDARVHNMSYI  185 (200)
Q Consensus       160 ~~WSPDGk~Laf~r~D~s~v~~~~i~  185 (200)
                      +.|||||+.|++......  .++.+.
T Consensus       200 ia~s~dg~~ly~~~~~~~--~l~~~~  223 (343)
T 2qe8_A          200 IVLDAENEWLYLSPMHST--SMYRIK  223 (343)
T ss_dssp             EEECTTSCEEEEEESSCS--EEEEEE
T ss_pred             eEeccCCCEEEEEeCCCC--eEEEEE
Confidence            999999998876543322  444443

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=85.04  E-value=4.9  Score=31.88  Aligned_cols=36  Identities=6%  Similarity=0.004  Sum_probs=23.8

Q ss_pred             CceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEe
Q psy7767          97 FLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALT  132 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT  132 (200)
                      ....++|+|+++.|.++-  ++.|++.+.+++....+.
T Consensus        37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~   74 (267)
T 1npe_A           37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII   74 (267)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE
T ss_pred             cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE
Confidence            356778888888876664  346888777765544433

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=84.99  E-value=4.6  Score=36.03  Aligned_cols=59  Identities=10%  Similarity=0.088  Sum_probs=41.3

Q ss_pred             ceeecCCCCCceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          88 DVSDLDGSNFLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        88 ~v~~lt~~~~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      -+.++..+.....+.+||||+...|+.   +++|.+.|..+++..+-...+                   +....+.+||
T Consensus       323 v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-------------------~~p~~l~~s~  383 (386)
T 3sjl_D          323 RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-------------------GHGPQVITTA  383 (386)
T ss_dssp             EEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-------------------CSSCCEEEEC
T ss_pred             EEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-------------------CCCceeEECC
Confidence            344454455677899999999888886   357999999887765333322                   2456678888


Q ss_pred             C
Q psy7767         165 D  165 (200)
Q Consensus       165 D  165 (200)
                      |
T Consensus       384 d  384 (386)
T 3sjl_D          384 D  384 (386)
T ss_dssp             C
T ss_pred             c
Confidence            7

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=83.57  E-value=4.4  Score=34.31  Aligned_cols=57  Identities=11%  Similarity=0.003  Sum_probs=35.3

Q ss_pred             ceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          98 LQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+++.|++..|.++-   .+.|+..++++...+.+...+                  +....++.++|++++|.++
T Consensus       124 P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~------------------l~~Pnglavd~~~~~lY~a  183 (318)
T 3sov_A          124 PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE------------------IYWPNGLTLDYEEQKLYWA  183 (318)
T ss_dssp             EEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS------------------CSCEEEEEEETTTTEEEEE
T ss_pred             ccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC------------------CCCccEEEEeccCCEEEEE
Confidence            35567777777766664   245777766654444443222                  2345678999998888665

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=82.82  E-value=18  Score=31.36  Aligned_cols=57  Identities=9%  Similarity=0.044  Sum_probs=38.6

Q ss_pred             ceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          98 LQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+++.|.+..|.++-   .+.|+..++++.....+...+                  +....++.++|++++|.++
T Consensus       204 P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~------------------l~~P~glavd~~~~~lY~a  263 (400)
T 3p5b_L          204 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN------------------IQWPNGITLDLLSGRLYWV  263 (400)
T ss_dssp             EEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS------------------CSCEEEEEEETTTTEEEEE
T ss_pred             cceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC------------------CCceEEEEEEeCCCEEEEE
Confidence            46678888888877765   246888887766555554322                  1245678899988888665

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=82.72  E-value=5.5  Score=34.71  Aligned_cols=54  Identities=6%  Similarity=-0.106  Sum_probs=34.7

Q ss_pred             ceeeEECcCCCEEEEEEc--CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          98 LQLVQWSPVGHDLIFVKD--NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~--gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...++|+|+|+ |.++-.  +.|++.+.+++....+...+.                   ... +.|+|||+.|+..
T Consensus       133 P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~~~~~~-------------------~~~-ia~~~~g~~l~~~  188 (409)
T 3hrp_A          133 MWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVHPGFK-------------------GGK-PAVTKDKQRVYSI  188 (409)
T ss_dssp             EEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEEETCC-------------------BCB-CEECTTSSEEEEE
T ss_pred             ceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEeeccCC-------------------CCc-eeEecCCCcEEEE
Confidence            46778899887 333322  468888877776665554321                   223 7899999876443

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=82.48  E-value=16  Score=33.55  Aligned_cols=35  Identities=9%  Similarity=-0.097  Sum_probs=25.0

Q ss_pred             ceeeEECcCCCEEEEEE---------------------cCcEEEEECCCCCeEEEee
Q psy7767          98 LQLVQWSPVGHDLIFVK---------------------DNNLYQAYDDFRSINALTR  133 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~---------------------~gdLyv~~~~~g~~~rLT~  133 (200)
                      ..++.|+|+++ +.+++                     ++.|.+.++++++..+-..
T Consensus       190 ~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~  245 (462)
T 2ece_A          190 AYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT  245 (462)
T ss_dssp             CCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE
T ss_pred             cceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe
Confidence            35688999999 55666                     4689999998775544333

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=82.34  E-value=6  Score=31.24  Aligned_cols=68  Identities=24%  Similarity=0.138  Sum_probs=34.1

Q ss_pred             CceeeEECcCCCEEEEEEc-C-cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD-N-NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~-g-dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ....++++|||+.++=... + .|.+.+.++.....+.....                 .....++.++|||+ |. +..
T Consensus       208 ~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~-----------------~~~~~~i~~~~~g~-l~-vs~  268 (286)
T 1q7f_A          208 YPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVK-----------------HAQCFDVALMDDGS-VV-LAS  268 (286)
T ss_dssp             SEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSC-----------------CSCEEEEEEETTTE-EE-EEE
T ss_pred             CCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCC-----------------CCcceeEEECCCCc-EE-EEC
Confidence            3456677777753222222 2 56666544333333332111                 01234789999995 53 434


Q ss_pred             cCCcceEEE
Q psy7767         175 NDARVHNMS  183 (200)
Q Consensus       175 D~s~v~~~~  183 (200)
                      .+..+..|.
T Consensus       269 ~~~~v~v~~  277 (286)
T 1q7f_A          269 KDYRLYIYR  277 (286)
T ss_dssp             TTTEEEEEE
T ss_pred             CCCeEEEEE
Confidence            445555554

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=81.73  E-value=8.9  Score=31.89  Aligned_cols=57  Identities=9%  Similarity=0.018  Sum_probs=34.4

Q ss_pred             ceeeEECcCCCEEEEEEc---CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          98 LQLVQWSPVGHDLIFVKD---NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~---gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+++.|++..|.++-.   +.|+..++++...+.+...+                  +....++.++|++++|.++
T Consensus       122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~------------------~~~P~gla~d~~~~~lY~~  181 (316)
T 1ijq_A          122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN------------------IQWPNGITLDLLSGRLYWV  181 (316)
T ss_dssp             EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS------------------CSCEEEEEEETTTTEEEEE
T ss_pred             cceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECC------------------CCCceEEEEeccCCEEEEE
Confidence            456677777776655532   35676666554443333211                  2345678899998888665

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=81.32  E-value=4.6  Score=38.43  Aligned_cols=57  Identities=19%  Similarity=0.264  Sum_probs=34.2

Q ss_pred             eeeEECcCCCEEEEEEcC--------------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          99 QLVQWSPVGHDLIFVKDN--------------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~~g--------------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      -++.+.|+|. |-|..++              .||..+.++|+.+++...+.                 +....++.|||
T Consensus       479 DnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-----------------~aEpnGiafSP  540 (592)
T 4a9v_A          479 DGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPI-----------------GCEVTGISFSP  540 (592)
T ss_dssp             EEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCT-----------------TCEEEEEEECT
T ss_pred             CceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCC-----------------CccccCCEECC
Confidence            4567777764 4443321              56666666666666654221                 01346889999


Q ss_pred             CCCEEEEEEE
Q psy7767         165 DGSILAYMKF  174 (200)
Q Consensus       165 DGk~Laf~r~  174 (200)
                      |+++| |+..
T Consensus       541 D~ktL-fV~v  549 (592)
T 4a9v_A          541 DQKTL-FVGI  549 (592)
T ss_dssp             TSSEE-EEEE
T ss_pred             CCCEE-EEEE
Confidence            99987 4543

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=81.04  E-value=5.8  Score=32.49  Aligned_cols=18  Identities=17%  Similarity=0.019  Sum_probs=13.7

Q ss_pred             CCCcceEEccCCCEEEEE
Q psy7767         155 SSTKTLWFSPDGSILAYM  172 (200)
Q Consensus       155 ~~~~~~~WSPDGk~Laf~  172 (200)
                      ....++.|+|||+.|.+.
T Consensus       185 ~~p~gia~~~dg~~lyv~  202 (322)
T 2fp8_A          185 HVPGGAEVSADSSFVLVA  202 (322)
T ss_dssp             SCCCEEEECTTSSEEEEE
T ss_pred             ccCcceEECCCCCEEEEE
Confidence            356678999999877554

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=80.28  E-value=7.4  Score=30.68  Aligned_cols=34  Identities=9%  Similarity=0.039  Sum_probs=20.5

Q ss_pred             CceeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEe
Q psy7767          97 FLQLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALT  132 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT  132 (200)
                      ....++++|||+ | |+.   ++.|++.+.++.....+.
T Consensus       165 ~p~~i~~~~~g~-l-~v~~~~~~~i~~~~~~g~~~~~~~  201 (286)
T 1q7f_A          165 FPNGVVVNDKQE-I-FISDNRAHCVKVFNYEGQYLRQIG  201 (286)
T ss_dssp             SEEEEEECSSSE-E-EEEEGGGTEEEEEETTCCEEEEES
T ss_pred             CcEEEEECCCCC-E-EEEECCCCEEEEEcCCCCEEEEEc
Confidence            356778888887 3 343   356887776544334443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	200
d1xfda1	465	b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-lik	5e-12
d2bgra1	470	b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,	9e-07

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 465

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.5 bits (148), Expect = 5e-12
 Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 2/116 (1%)

Query: 80  SGRPDTLTDVSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGV 139
            G P +L      +    LQ   W P G  LIF+ +NN+Y      +    +   G +GV
Sbjct: 100 HGDPQSLDPPEVSNAK--LQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGV 157

Query: 140 LFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGSKTY 195
           ++NG++DW+YEEE+  +    W+SPDG+ LAY   ND+RV  M    Y      T 
Sbjct: 158 IYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTV 213

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 470

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 46.3 bits (108), Expect = 9e-07
 Identities = 41/100 (41%), Positives = 59/100 (59%)

Query: 93  DGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEE 152
              N  Q V WSPVGH L +V +N++Y   +       +T  G + +++NG+ DWVYEEE
Sbjct: 109 RIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168

Query: 153 VFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPGS 192
           VFS+   LW+SP+G+ LAY +FND  V  + Y  Y +   
Sbjct: 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESL 208

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	200
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.9
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.79
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	99.28
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.19
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	99.01
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.71
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	98.67
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.54
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	98.54
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.99
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	97.82
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	97.56
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	97.47
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	97.44
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	97.18
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	97.15
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	97.11
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	97.07
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	97.05
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	96.99
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	96.91
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	96.89
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	96.79
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	96.79
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	96.77
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	96.63
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	96.59
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	96.54
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	96.37
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	96.36
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	96.33
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	96.27
d1tbga_	340	beta1-subunit of the signal-transducing G protein	96.26
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	96.23
d1tbga_	340	beta1-subunit of the signal-transducing G protein	96.14
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	96.09
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	95.98
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	95.9
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	95.7
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	95.56
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	95.56
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	95.2
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	95.2
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	95.05
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	94.52
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	94.4
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	93.82
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	93.41
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	93.11
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	93.07
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	92.58
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	91.25
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	91.05
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	89.98
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	86.99
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	86.73
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	86.56
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	84.45
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	82.93
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	82.67

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.3e-24  Score=196.22  Aligned_cols=147  Identities=32%  Similarity=0.519  Sum_probs=121.8

Q ss_pred             cceEEEEeccCcceeEEEEEeeeee-eeeeecCCCCccc-----eeecCC----CCCceeeEECcCCCEEEEEEcCcEEE
Q psy7767          51 DYNLYLQRSTDIALKLSIRCLTWKQ-SHSLSGRPDTLTD-----VSDLDG----SNFLQLVQWSPVGHDLIFVKDNNLYQ  120 (200)
Q Consensus        51 ~~~~y~~~~~~~~~kv~i~~n~~~~-R~s~~a~~~~~~~-----v~~lt~----~~~is~~~wSPDGk~IAFV~~gdLyv  120 (200)
                      +..-|.+.+.+  ++|++..|..+. |||+.+.++ +.+     .+.+.+    ...++.++|||||++||||++++||+
T Consensus        62 ~~~~~~~SpD~--~~vl~~~~~~~~~r~s~~~~~~-i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~nl~~  138 (465)
T d1xfda1          62 RAIRYEISPDR--EYALFSYNVEPIYQHSYTGYYV-LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYY  138 (465)
T ss_dssp             TCSEEEECTTS--SEEEEEESCCCCSSSCCCSEEE-EEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEE
T ss_pred             ccceeEECCCC--CeEEEEEcccceeEeeccccEE-EEEccCCceeeccCccCCccccceeeeccCCceEEEEecceEEE
Confidence            44456666543  578999998888 999999886 333     334432    34567899999999999999999999


Q ss_pred             EECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeCCCC---CCCCCC
Q psy7767         121 AYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGEPG---SKTYLY  197 (200)
Q Consensus       121 ~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~~~---~~~~~Y  197 (200)
                      .+..++...|+|.+|.+..++||.+||+|+||+++...++||||||++|||.+.|++.|+.+.++.+.+..   ....+|
T Consensus       139 ~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Y  218 (465)
T d1xfda1         139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY  218 (465)
T ss_dssp             ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred             EecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeeeeec
Confidence            99999999999999988888999999999999888889999999999999999999999999999887532   235677


Q ss_pred             CCC
Q psy7767         198 PDV  200 (200)
Q Consensus       198 P~v  200 (200)
                      |++
T Consensus       219 p~~  221 (465)
T d1xfda1         219 PKA  221 (465)
T ss_dssp             CBT
T ss_pred             ccc
Confidence            763

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.79  E-value=1.7e-19  Score=157.09  Aligned_cols=127  Identities=36%  Similarity=0.663  Sum_probs=110.2

Q ss_pred             ceeEEEEEeeeee-eeeeecCCCCc----cceeecCC-CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCC
Q psy7767          63 ALKLSIRCLTWKQ-SHSLSGRPDTL----TDVSDLDG-SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGI  136 (200)
Q Consensus        63 ~~kv~i~~n~~~~-R~s~~a~~~~~----~~v~~lt~-~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~  136 (200)
                      .++|++..+..+. ||++.+.++..    .++..++. ......++|||||+.|||++++++|+.++.++...+++.++.
T Consensus        73 g~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~t~~~~  152 (470)
T d2bgra1          73 GQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGK  152 (470)
T ss_dssp             SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCB
T ss_pred             CCEEEEEECCcceeeeccCceEEEEECCCCcccccccCCccccccccccCcceeeEeecccceEEECCCCceeeeeeccC
Confidence            4678888888877 99988887621    23444443 456799999999999999999999999999999999999888


Q ss_pred             cceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeCC
Q psy7767         137 KGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       137 ~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~  189 (200)
                      ....++|.++|+++|++++...+++|||||++|||.+.|++.++.+.++.+..
T Consensus       153 ~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~  205 (470)
T d2bgra1         153 EDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD  205 (470)
T ss_dssp             TTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCS
T ss_pred             CCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEEEeecc
Confidence            88889999999999988888999999999999999999999999999988865

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.28  E-value=3.6e-12  Score=100.91  Aligned_cols=60  Identities=20%  Similarity=0.237  Sum_probs=51.1

Q ss_pred             eeEECcC--CCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767         100 LVQWSPV--GHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA  177 (200)
Q Consensus       100 ~~~wSPD--Gk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s  177 (200)
                      .+.+|||  |++|||+++++||+.++++|+.++||....                   ...+++|||||++|||++.+.+
T Consensus         3 ~~~~sPdi~G~~v~f~~~~dl~~~d~~~g~~~~Lt~~~~-------------------~~~~p~~SPDG~~iaf~~~~~~   63 (281)
T d1k32a2           3 NLLLNPDIHGDRIIFVCCDDLWEHDLKSGSTRKIVSNLG-------------------VINNARFFPDGRKIAIRVMRGS   63 (281)
T ss_dssp             CCCEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSS-------------------EEEEEEECTTSSEEEEEEEEST
T ss_pred             CcccCCCCCCCEEEEEeCCcEEEEECCCCCEEEEecCCC-------------------cccCEEECCCCCEEEEEEeeCC
Confidence            3467999  999999999999999999999999998643                   3457899999999999986554


Q ss_pred             c
Q psy7767         178 R  178 (200)
Q Consensus       178 ~  178 (200)
                      .
T Consensus        64 ~   64 (281)
T d1k32a2          64 S   64 (281)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.19  E-value=1e-10  Score=92.75  Aligned_cols=86  Identities=20%  Similarity=0.142  Sum_probs=62.6

Q ss_pred             eeeecCCCCccceeecCC-CCCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeee
Q psy7767          77 HSLSGRPDTLTDVSDLDG-SNFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEE  151 (200)
Q Consensus        77 ~s~~a~~~~~~~v~~lt~-~~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eE  151 (200)
                      +.|.++.. ..+.+.++. ...+..|+|||||++|||++..    .+|+.+.+++...+++....               
T Consensus        20 ~l~i~d~d-G~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------   83 (269)
T d2hqsa1          20 ELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR---------------   83 (269)
T ss_dssp             EEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS---------------
T ss_pred             EEEEEcCC-CCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeec---------------
Confidence            34444442 345555543 4556899999999999999854    59999999999999987653               


Q ss_pred             eeeCCCcceEEccCCCEEEEEEEcCCcceEE
Q psy7767         152 EVFSSTKTLWFSPDGSILAYMKFNDARVHNM  182 (200)
Q Consensus       152 Ei~~~~~~~~WSPDGk~Laf~r~D~s~v~~~  182 (200)
                          ....+.|||||++|+|.....+.....
T Consensus        84 ----~~~~~~~spdg~~i~~~~~~~~~~~~~  110 (269)
T d2hqsa1          84 ----HNGAPAFSPDGSKLAFALSKTGSLNLY  110 (269)
T ss_dssp             ----CEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred             ----ccccceecCCCCeeeEeeecCCcccee
Confidence                334678999999999987665544433

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.01  E-value=5.2e-10  Score=88.10  Aligned_cols=77  Identities=16%  Similarity=0.167  Sum_probs=55.7

Q ss_pred             ceeecCCC-CCceeeEECcCCCEEEEEEc-------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcc
Q psy7767          88 DVSDLDGS-NFLQLVQWSPVGHDLIFVKD-------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKT  159 (200)
Q Consensus        88 ~v~~lt~~-~~is~~~wSPDGk~IAFV~~-------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~  159 (200)
                      +.++|+.+ .....|+|||||++|||+..       .+||+.++.+++.++||..+...    +.+.        .....
T Consensus        32 ~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~----~~~~--------~~~~~   99 (281)
T d1k32a2          32 STRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKS----TGRR--------MFTDV   99 (281)
T ss_dssp             CEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEE----ETTE--------ECSEE
T ss_pred             CEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCc----cCcc--------ccccc
Confidence            44455543 45688999999999999963       26999999999999999865311    1110        13456


Q ss_pred             eEEccCCCEEEEEEEcC
Q psy7767         160 LWFSPDGSILAYMKFND  176 (200)
Q Consensus       160 ~~WSPDGk~Laf~r~D~  176 (200)
                      +.|||||+.|+|.....
T Consensus       100 ~~~spdg~~l~~~~~~~  116 (281)
T d1k32a2         100 AGFDPDGNLIISTDAMQ  116 (281)
T ss_dssp             EEECTTCCEEEEECTTS
T ss_pred             cccCCCCCEEEEEEccC
Confidence            78999999999975443

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.71  E-value=1.3e-07  Score=74.21  Aligned_cols=75  Identities=13%  Similarity=0.101  Sum_probs=54.1

Q ss_pred             CCCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ......+.|||||+.++|+...    .+++.+.+++..+ ++....                   ....+.|||||++|+
T Consensus       170 ~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~-------------------~~~~p~~SPDG~~i~  229 (269)
T d2hqsa1         170 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-------------------LDETPSLAPNGTMVI  229 (269)
T ss_dssp             SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-------------------SCEEEEECTTSSEEE
T ss_pred             cccccccccccccceeEEEeecCCceeeeEeecccccce-EeecCc-------------------cccceEECCCCCEEE
Confidence            3445789999999999999754    6888887766654 443321                   234689999999999


Q ss_pred             EEEEcCCcceEEEEEeeCC
Q psy7767         171 YMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       171 f~r~D~s~v~~~~i~~~~~  189 (200)
                      |+....+...++.+...++
T Consensus       230 f~s~~~~~~~l~~~~~dg~  248 (269)
T d2hqsa1         230 YSSSQGMGSVLNLVSTDGR  248 (269)
T ss_dssp             EEEEETTEEEEEEEETTSC
T ss_pred             EEEcCCCCcEEEEEECCCC
Confidence            9987766556666555544

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.67  E-value=7.9e-09  Score=82.62  Aligned_cols=58  Identities=10%  Similarity=0.049  Sum_probs=49.0

Q ss_pred             eeEECc-CCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCC
Q psy7767         100 LVQWSP-VGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDA  177 (200)
Q Consensus       100 ~~~wSP-DGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s  177 (200)
                      ...||| ||+.|||+.+++||+.+++++...++++.+                    +...+.|||||++|++...+++
T Consensus         7 ~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~~~~~~~--------------------~v~~~~~spDg~~l~~~~~~~g   65 (360)
T d1k32a3           7 AEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPL--------------------RIRYVRRGGDTKVAFIHGTREG   65 (360)
T ss_dssp             EEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCS--------------------CEEEEEECSSSEEEEEEEETTE
T ss_pred             cccccCCCCCEEEEEECCeEEEEECCCCcEEEccCCC--------------------CEEEEEECCCCCEEEEEEcCCC
Confidence            357999 999999999999999999999988886533                    3457899999999999877654

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.54  E-value=2.8e-08  Score=85.16  Aligned_cols=62  Identities=21%  Similarity=0.131  Sum_probs=50.2

Q ss_pred             CCCceeeEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      ...+..++|||||++|||..+          +++|+.++++++..+++..+.                   ....+.|||
T Consensus        61 ~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~-------------------~~~~~~~SP  121 (470)
T d2bgra1          61 GHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPN-------------------NTQWVTWSP  121 (470)
T ss_dssp             SSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCT-------------------TEEEEEECS
T ss_pred             cCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccccccCCc-------------------ccccccccc
Confidence            346789999999999999964          479999999998887776543                   234689999


Q ss_pred             CCCEEEEEEEc
Q psy7767         165 DGSILAYMKFN  175 (200)
Q Consensus       165 DGk~Laf~r~D  175 (200)
                      ||++|||++.+
T Consensus       122 DG~~ia~~~~~  132 (470)
T d2bgra1         122 VGHKLAYVWNN  132 (470)
T ss_dssp             STTCEEEEETT
T ss_pred             CcceeeEeecc
Confidence            99999998643

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.54  E-value=2.4e-07  Score=73.76  Aligned_cols=69  Identities=6%  Similarity=-0.137  Sum_probs=53.7

Q ss_pred             ceeecCCCCCceeeEECcCCCEEEEEEcC---cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          88 DVSDLDGSNFLQLVQWSPVGHDLIFVKDN---NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        88 ~v~~lt~~~~is~~~wSPDGk~IAFV~~g---dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      .+.++..+..+..++|||||+.|+++...   .|++.+++++..++++....                   ....+.|||
T Consensus        35 ~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~-------------------~v~~~~~sp   95 (360)
T d1k32a3          35 YVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLG-------------------NVFAMGVDR   95 (360)
T ss_dssp             BEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECCCCCC-------------------SEEEEEECT
T ss_pred             cEEEccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEeeCCCc-------------------eEEeeeecc
Confidence            45555556778999999999999999754   48999999998888775432                   334689999


Q ss_pred             CCCEEEEEEEc
Q psy7767         165 DGSILAYMKFN  175 (200)
Q Consensus       165 DGk~Laf~r~D  175 (200)
                      ||++|++...+
T Consensus        96 dg~~l~~~~~~  106 (360)
T d1k32a3          96 NGKFAVVANDR  106 (360)
T ss_dssp             TSSEEEEEETT
T ss_pred             cccccceeccc
Confidence            99999876443

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=3.7e-06  Score=74.14  Aligned_cols=63  Identities=13%  Similarity=0.081  Sum_probs=48.5

Q ss_pred             CceeeEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          97 FLQLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      .+....|||||+.|+|..+          +++|+.++.++...+|+......                +....+.|||||
T Consensus        62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~----------------~~l~~~~wSPDG  125 (465)
T d1xfda1          62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN----------------AKLQYAGWGPKG  125 (465)
T ss_dssp             TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS----------------CCCSBCCBCSST
T ss_pred             ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCCc----------------cccceeeeccCC
Confidence            4567789999999999864          47999999999999887643211                123357899999


Q ss_pred             CEEEEEEEc
Q psy7767         167 SILAYMKFN  175 (200)
Q Consensus       167 k~Laf~r~D  175 (200)
                      ++|||++.+
T Consensus       126 ~~iafv~~~  134 (465)
T d1xfda1         126 QQLIFIFEN  134 (465)
T ss_dssp             TCEEEEETT
T ss_pred             ceEEEEecc
Confidence            999999753

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=0.00012  Score=57.11  Aligned_cols=75  Identities=12%  Similarity=0.028  Sum_probs=45.8

Q ss_pred             eeecCCCCCceeeEECcCCCEEEEEE--cCcEEEEECCCC--CeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          89 VSDLDGSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFR--SINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        89 v~~lt~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g--~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      ++.+..+..+..++|||||+.|+...  ++.|.+.+++.+  ....+.....                 -.....+.|||
T Consensus        30 ~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~-----------------~~~p~~l~~sp   92 (333)
T d1ri6a_          30 TQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-----------------PGSLTHISTDH   92 (333)
T ss_dssp             EEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-----------------SSCCSEEEECT
T ss_pred             EEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeeccc-----------------CCCceEEEEcC
Confidence            33344467789999999999995554  345766666543  2233322110                 02355789999


Q ss_pred             CCCEEEEEEEcCCcce
Q psy7767         165 DGSILAYMKFNDARVH  180 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~  180 (200)
                      ||++|+....+...+.
T Consensus        93 Dg~~l~v~~~~~~~v~  108 (333)
T d1ri6a_          93 QGQFVFVGSYNAGNVS  108 (333)
T ss_dssp             TSSEEEEEETTTTEEE
T ss_pred             CCCEEeecccCCCcee
Confidence            9999876554444443

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=97.56  E-value=0.00012  Score=58.74  Aligned_cols=61  Identities=11%  Similarity=-0.119  Sum_probs=44.4

Q ss_pred             CCCceeeEECcCCCEEEEEE------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      ......+++||||++++...      .++||+.|.++++...-.+.+                    ....+.|||||++
T Consensus        20 ~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~--------------------~~~~~a~SpDG~~   79 (373)
T d2madh_          20 DGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG--------------------FLPNPVAAHSGSE   79 (373)
T ss_pred             CCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCC--------------------CCccEEEcCCCCE
Confidence            45578889999999997652      247999998888765433322                    2235899999999


Q ss_pred             EEEEEEc
Q psy7767         169 LAYMKFN  175 (200)
Q Consensus       169 Laf~r~D  175 (200)
                      |++...+
T Consensus        80 l~va~~~   86 (373)
T d2madh_          80 FALASTS   86 (373)
T ss_pred             EEEEeec
Confidence            9887543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=97.47  E-value=0.00067  Score=52.60  Aligned_cols=67  Identities=15%  Similarity=-0.032  Sum_probs=44.3

Q ss_pred             CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      +.....++|||||+.+....  ++.|++.++++++.......+....            .......++.|||||++|+..
T Consensus        39 ~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~------------~~~~~~~~v~~s~DG~~l~v~  106 (346)
T d1jmxb_          39 KFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG------------EVGRSMYSFAISPDGKEVYAT  106 (346)
T ss_dssp             CCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT------------EEEECSSCEEECTTSSEEEEE
T ss_pred             CCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccccccc------------ccCCceEEEEEecCCCEEEEE
Confidence            45678999999999875443  4579999998887654333222110            001245678999999988654


Q ss_pred             E
Q psy7767         173 K  173 (200)
Q Consensus       173 r  173 (200)
                      .
T Consensus       107 ~  107 (346)
T d1jmxb_         107 V  107 (346)
T ss_dssp             E
T ss_pred             e
Confidence            3

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.44  E-value=0.00031  Score=57.33  Aligned_cols=73  Identities=12%  Similarity=0.005  Sum_probs=46.7

Q ss_pred             CceeeEECcCCCEEEEEEc-----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccC
Q psy7767          97 FLQLVQWSPVGHDLIFVKD-----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPD  165 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~-----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPD  165 (200)
                      ....++|||||+.|++...           +.|.+.+..+++..+....+......-|           .....+.||||
T Consensus        66 ~~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g-----------~~p~~~a~SpD  134 (368)
T d1mdah_          66 FLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG-----------PRVHIIGNCAS  134 (368)
T ss_dssp             TTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS-----------CCTTSEEECTT
T ss_pred             CCCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceeccc-----------CCccceEECCC
Confidence            3457899999999999852           2488888887776543332211000001           23457899999


Q ss_pred             CCEEEEEEEcCCcce
Q psy7767         166 GSILAYMKFNDARVH  180 (200)
Q Consensus       166 Gk~Laf~r~D~s~v~  180 (200)
                      |++|++...+.+.+.
T Consensus       135 Gk~l~va~~~~~~v~  149 (368)
T d1mdah_         135 SACLLFFLFGSSAAA  149 (368)
T ss_dssp             SSCEEEEECSSSCEE
T ss_pred             CCEEEEEeCCCCeEE
Confidence            999987765554443

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.18  E-value=0.00072  Score=56.58  Aligned_cols=77  Identities=12%  Similarity=0.043  Sum_probs=48.5

Q ss_pred             ceeecCCCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEee--CCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          88 DVSDLDGSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTR--DGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        88 ~v~~lt~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~--dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      .+..+..+.....+++||||++|+-.. ++.|.+.++++++...+..  .+.      +.         .+...++.|||
T Consensus        54 ~~~~l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~------~~---------~~~~~s~~~sp  118 (426)
T d1hzua2          54 IVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI------EA---------RSVESSKFKGY  118 (426)
T ss_dssp             EEEEEECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS------EE---------EEEEECCSTTC
T ss_pred             EEEEEeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCC------CC---------cceEEeeeecC
Confidence            344555556678899999999986554 4679999998876543321  111      00         01123567899


Q ss_pred             CCCEEEEEEEcCCcc
Q psy7767         165 DGSILAYMKFNDARV  179 (200)
Q Consensus       165 DGk~Laf~r~D~s~v  179 (200)
                      ||++|+.....+..+
T Consensus       119 DG~~l~v~~~~~~~v  133 (426)
T d1hzua2         119 EDRYTIAGAYWPPQF  133 (426)
T ss_dssp             TTTEEEEEEEESSEE
T ss_pred             CCCEEEEeecCCCeE
Confidence            999987655444333

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.15  E-value=0.00066  Score=57.96  Aligned_cols=79  Identities=10%  Similarity=-0.019  Sum_probs=48.6

Q ss_pred             ceeecCCCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEee--CCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          88 DVSDLDGSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTR--DGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        88 ~v~~lt~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~--dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      -+..+..+......++||||++|+... ++.|.+.++++++...+..  .+...               .+...++.|||
T Consensus        54 v~~~~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~---------------~~~~~s~~~Sp  118 (432)
T d1qksa2          54 IKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA---------------RSIETSKMEGW  118 (432)
T ss_dssp             EEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE---------------EEEEECCSTTC
T ss_pred             EEEEEeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCC---------------CCeEEecccCC
Confidence            344454566678999999999997654 4678999988766433321  11100               01123456899


Q ss_pred             CCCEEEEEEEcCCcceE
Q psy7767         165 DGSILAYMKFNDARVHN  181 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~~  181 (200)
                      ||++|+-...++..+.+
T Consensus       119 DG~~l~vs~~~~~~v~i  135 (432)
T d1qksa2         119 EDKYAIAGAYWPPQYVI  135 (432)
T ss_dssp             TTTEEEEEEEETTEEEE
T ss_pred             CCCEEEEEcCCCCeEEE
Confidence            99998655554444443

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.11  E-value=0.00087  Score=53.99  Aligned_cols=68  Identities=13%  Similarity=0.086  Sum_probs=47.8

Q ss_pred             CceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcC
Q psy7767          97 FLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFND  176 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~  176 (200)
                      ....++++|+|+.|||..++.+++.+++++...++-....                  +....+.|||||++||-. ..+
T Consensus        19 ~~~~~a~~~~g~~l~~~~~~~v~i~~~~~~~~~~~~~~H~------------------~~v~~~~~sp~g~~latg-~~d   79 (311)
T d1nr0a1          19 TAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHS------------------HQTTVAKTSPSGYYCASG-DVH   79 (311)
T ss_dssp             CCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCS------------------SCEEEEEECTTSSEEEEE-ETT
T ss_pred             CeEEEEEcCCCCEEEEEeCCEEEEEECCCCceeEEEcCCC------------------CCEEEEEEeCCCCeEecc-ccC
Confidence            4456799999999999999999999998776544432211                  123578899999988644 444


Q ss_pred             CcceEEE
Q psy7767         177 ARVHNMS  183 (200)
Q Consensus       177 s~v~~~~  183 (200)
                      +.+.++.
T Consensus        80 g~i~iwd   86 (311)
T d1nr0a1          80 GNVRIWD   86 (311)
T ss_dssp             SEEEEEE
T ss_pred             ceEeeee
Confidence            4455543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.07  E-value=0.001  Score=52.43  Aligned_cols=68  Identities=15%  Similarity=0.007  Sum_probs=44.0

Q ss_pred             CCceeeEECcCCCEEEEEE-----------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          96 NFLQLVQWSPVGHDLIFVK-----------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~-----------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      +....++|||||+.|+.+.           ++.|.+.++.+++..+....+......           +......+.|||
T Consensus        47 g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~-----------~~~~~~~~~~s~  115 (355)
T d2bbkh_          47 GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL-----------VGTYPWMTSLTP  115 (355)
T ss_dssp             CSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC-----------BSCCGGGEEECT
T ss_pred             CCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceee-----------cCCCCceEEEec
Confidence            3445789999999998764           357999999888765443322111000           012446789999


Q ss_pred             CCCEEEEEEE
Q psy7767         165 DGSILAYMKF  174 (200)
Q Consensus       165 DGk~Laf~r~  174 (200)
                      ||+++++...
T Consensus       116 dg~~~~v~~~  125 (355)
T d2bbkh_         116 DGKTLLFYQF  125 (355)
T ss_dssp             TSSEEEEEEC
T ss_pred             CCCeeEEecC
Confidence            9999876543

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.0064  Score=48.28  Aligned_cols=72  Identities=13%  Similarity=0.066  Sum_probs=52.1

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|||||+.|+-.. ++.|.+.++..++..+......                   ....+.|||||++|+- .
T Consensus       265 ~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-------------------~v~~~~~s~d~~~l~t-~  324 (337)
T d1gxra_         265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-------------------SVLSCDISVDDKYIVT-G  324 (337)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-------------------CEEEEEECTTSCEEEE-E
T ss_pred             ccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccCCC-------------------CEEEEEEeCCCCEEEE-E
Confidence            46689999999999887664 4679999988877654433211                   2346789999998864 4


Q ss_pred             EcCCcceEEEEEe
Q psy7767         174 FNDARVHNMSYIH  186 (200)
Q Consensus       174 ~D~s~v~~~~i~~  186 (200)
                      .+++.+..+.+.+
T Consensus       325 s~D~~I~vWdl~~  337 (337)
T d1gxra_         325 SGDKKATVYEVIY  337 (337)
T ss_dssp             ETTSCEEEEEEEC
T ss_pred             eCCCeEEEEEEEC
Confidence            5667788887653

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.99  E-value=0.00068  Score=53.53  Aligned_cols=51  Identities=12%  Similarity=0.097  Sum_probs=36.2

Q ss_pred             EECcCCCEEEEEE------cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767         102 QWSPVGHDLIFVK------DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus       102 ~wSPDGk~IAFV~------~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      +.||||++++...      .+.||+.+.++++.......|                    ...++.|||||++|+..
T Consensus         8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g--------------------~~~~~a~SpDg~~l~v~   64 (355)
T d2bbkh_           8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--------------------FLPNPVVADDGSFIAHA   64 (355)
T ss_dssp             CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC--------------------SSCEEEECTTSSCEEEE
T ss_pred             eeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECC--------------------CCCceEEcCCCCEEEEE
Confidence            5799999994432      236999999888765443323                    22368999999998765

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.91  E-value=0.0073  Score=46.24  Aligned_cols=66  Identities=15%  Similarity=-0.026  Sum_probs=44.4

Q ss_pred             CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      +.....+++||||+.|..+.  ++.|++.++.+++...-........  .           .....++.|||||++|+..
T Consensus        33 ~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~--~-----------~~~~~~v~~s~dg~~l~~~   99 (337)
T d1pbyb_          33 GPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE--R-----------VKSLFGAALSPDGKTLAIY   99 (337)
T ss_dssp             TTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE--E-----------EECTTCEEECTTSSEEEEE
T ss_pred             CCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcc--c-----------ccceeeEEEcCCCcEEEEe
Confidence            34567899999999875553  4579999999887654333221110  0           1245678999999998766


Q ss_pred             E
Q psy7767         173 K  173 (200)
Q Consensus       173 r  173 (200)
                      .
T Consensus       100 ~  100 (337)
T d1pbyb_         100 E  100 (337)
T ss_dssp             E
T ss_pred             e
Confidence            4

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=96.89  E-value=0.0022  Score=49.57  Aligned_cols=68  Identities=13%  Similarity=-0.008  Sum_probs=49.0

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      ...+....++|++..+++...+.|.+.+..+++..+....+.                   ...++.|||||++|+ +..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~-------------------~~~~va~s~DG~~l~-v~~  310 (346)
T d1jmxb_         251 TELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDH-------------------TYYCVAFDKKGDKLY-LGG  310 (346)
T ss_dssp             SSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEECSS-------------------CCCEEEECSSSSCEE-EES
T ss_pred             cceeEEEEEeCCCCEEEEecCCeEEEEECCCCcEEEEEcCCC-------------------CEEEEEEcCCCCEEE-EEe
Confidence            345677899999999999999999999998877655444332                   345789999999885 444


Q ss_pred             cCCcceEE
Q psy7767         175 NDARVHNM  182 (200)
Q Consensus       175 D~s~v~~~  182 (200)
                      .++.+.++
T Consensus       311 ~d~~v~v~  318 (346)
T d1jmxb_         311 TFNDLAVF  318 (346)
T ss_dssp             BSSEEEEE
T ss_pred             CCCcEEEE
Confidence            44444433

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.79  E-value=0.0019  Score=52.42  Aligned_cols=72  Identities=6%  Similarity=0.018  Sum_probs=49.0

Q ss_pred             CCceeeEECcCCCEEEEEEc-CcEEEEECCCCCeEEEee-CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVKD-NNLYQAYDDFRSINALTR-DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~-gdLyv~~~~~g~~~rLT~-dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ..+...+|||||+.||.... +.|.+.++++++..++.. .|-.                 +....+.|||||++|+- .
T Consensus         8 ~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~-----------------~~V~~l~fsp~~~~l~s-~   69 (371)
T d1k8kc_           8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN-----------------GQVTGVDWAPDSNRIVT-C   69 (371)
T ss_dssp             SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS-----------------SCEEEEEEETTTTEEEE-E
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCC-----------------CCEEEEEECCCCCEEEE-E
Confidence            35788999999999998854 678888887766444432 1100                 12357889999998864 4


Q ss_pred             EcCCcceEEEEE
Q psy7767         174 FNDARVHNMSYI  185 (200)
Q Consensus       174 ~D~s~v~~~~i~  185 (200)
                      ..++.+.++.+.
T Consensus        70 s~D~~i~vWd~~   81 (371)
T d1k8kc_          70 GTDRNAYVWTLK   81 (371)
T ss_dssp             ETTSCEEEEEEE
T ss_pred             ECCCeEEEEeec
Confidence            555667666543

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=96.79  E-value=0.013  Score=44.21  Aligned_cols=69  Identities=14%  Similarity=0.048  Sum_probs=44.0

Q ss_pred             CCCceeeEECcCCCEEEEEEc----CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKD----NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~----gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      ......+.++|+|+.++....    +.|++.++.+++.......+.                   ...+++|||||++|+
T Consensus       199 ~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~-------------------~~~~va~spdg~~l~  259 (301)
T d1l0qa2         199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-------------------DPAGIAVTPDGKKVY  259 (301)
T ss_dssp             SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-------------------SEEEEEECTTSSEEE
T ss_pred             cCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCCC-------------------CEEEEEEeCCCCEEE
Confidence            344567899999999866542    358999887776543222221                   235689999999874


Q ss_pred             EEEEcCCcceEE
Q psy7767         171 YMKFNDARVHNM  182 (200)
Q Consensus       171 f~r~D~s~v~~~  182 (200)
                      ....+++.+.++
T Consensus       260 va~~~~~~i~v~  271 (301)
T d1l0qa2         260 VALSFCNTVSVI  271 (301)
T ss_dssp             EEETTTTEEEEE
T ss_pred             EEECCCCeEEEE
Confidence            343344444443

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=96.77  E-value=0.0051  Score=46.61  Aligned_cols=65  Identities=17%  Similarity=0.141  Sum_probs=43.8

Q ss_pred             ecCCCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCE
Q psy7767          91 DLDGSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSI  168 (200)
Q Consensus        91 ~lt~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~  168 (200)
                      .+..+.....+++||||++|+...  ++.|.+.++.+++..+....+.                   ...++.|+|||+.
T Consensus        27 ~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-------------------~~~~~~~~~~~~~   87 (301)
T d1l0qa2          27 TIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-------------------SPQGVAVSPDGKQ   87 (301)
T ss_dssp             EEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-------------------SEEEEEECTTSSE
T ss_pred             EEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-------------------ccccccccccccc
Confidence            343455678899999999986543  4679999998877654443321                   2345778888887


Q ss_pred             EEEEEE
Q psy7767         169 LAYMKF  174 (200)
Q Consensus       169 Laf~r~  174 (200)
                      ++....
T Consensus        88 ~~~~~~   93 (301)
T d1l0qa2          88 VYVTNM   93 (301)
T ss_dssp             EEEEET
T ss_pred             cccccc
Confidence            765443

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.63  E-value=0.011  Score=47.77  Aligned_cols=72  Identities=14%  Similarity=0.182  Sum_probs=47.0

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEE-eeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINAL-TRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rL-T~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+..++|||||+.|+-.. ++.|.+.+++++...+. +..+..                 .....+.|+|||+.|+..
T Consensus        51 ~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~-----------------~~v~~i~~~p~~~~l~~~  113 (371)
T d1k8kc_          51 NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN-----------------RAARCVRWAPNEKKFAVG  113 (371)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCS-----------------SCEEEEEECTTSSEEEEE
T ss_pred             CCCEEEEEECCCCCEEEEEECCCeEEEEeeccccccccccccccc-----------------ccccccccccccccceee
Confidence            45689999999999988664 46799988876654433 222210                 123467899999988654


Q ss_pred             EEcCCcceEEEE
Q psy7767         173 KFNDARVHNMSY  184 (200)
Q Consensus       173 r~D~s~v~~~~i  184 (200)
                       ..++.+..+.+
T Consensus       114 -s~d~~i~i~~~  124 (371)
T d1k8kc_         114 -SGSRVISICYF  124 (371)
T ss_dssp             -ETTSSEEEEEE
T ss_pred             -cccCcceeeee
Confidence             34444555443

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.59  E-value=0.0062  Score=48.22  Aligned_cols=83  Identities=19%  Similarity=0.089  Sum_probs=47.1

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeee---eCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEV---FSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi---~~~~~~~~WSPDGk~Laf  171 (200)
                      ...+..++|||||+.||--.++.|.+.++.+++..........   ....+........   -.....+.|||||+.|+-
T Consensus        62 ~~~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s  138 (388)
T d1erja_          62 TSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSA---ANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT  138 (388)
T ss_dssp             SSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC--------------------CCCCBEEEEEECTTSSEEEE
T ss_pred             CCcEEEEEECCCCCEEEEEeCCeEEEEEecccceEeeeccccc---ccccccccccccccCCCCCEEEEEECCCCCccee
Confidence            4678999999999999887788899999987765432221110   0000000000000   012356899999998864


Q ss_pred             EEEcCCcceE
Q psy7767         172 MKFNDARVHN  181 (200)
Q Consensus       172 ~r~D~s~v~~  181 (200)
                      . ..++.+..
T Consensus       139 ~-~~dg~v~i  147 (388)
T d1erja_         139 G-AEDRLIRI  147 (388)
T ss_dssp             E-ETTSCEEE
T ss_pred             c-cccccccc
Confidence            3 44444443

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=96.54  E-value=0.0067  Score=46.76  Aligned_cols=74  Identities=8%  Similarity=0.104  Sum_probs=42.4

Q ss_pred             CceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....+.+||||+.+.....+    .+|..+.+++.........      .|           +...++.|||||++|+..
T Consensus       231 ~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-----------~~p~~~a~spDGk~l~va  293 (333)
T d1ri6a_         231 WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP------TE-----------TQPRGFNVDHSGKYLIAA  293 (333)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE------CS-----------SSCCCEEECTTSSEEEEE
T ss_pred             cceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeC------CC-----------CCeeEEEEeCCCCEEEEE
Confidence            34667899999987666433    2444433333222221110      00           145678999999997543


Q ss_pred             EEcCCcceEEEEEee
Q psy7767         173 KFNDARVHNMSYIHY  187 (200)
Q Consensus       173 r~D~s~v~~~~i~~~  187 (200)
                      -.+...+.+|.+...
T Consensus       294 ~~~~~~v~v~~id~~  308 (333)
T d1ri6a_         294 GQKSHHISVYEIVGE  308 (333)
T ss_dssp             CTTTCEEEEEEEETT
T ss_pred             ECCCCeEEEEEEECC
Confidence            344556777766543

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=96.37  E-value=0.12  Score=40.51  Aligned_cols=60  Identities=10%  Similarity=0.067  Sum_probs=36.9

Q ss_pred             CCceeeEECcCCCEEEEEEcC-----------cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          96 NFLQLVQWSPVGHDLIFVKDN-----------NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~~g-----------dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      .......++|||+.+++....           .+.+.+..+++..+....+                   ....++.|||
T Consensus       267 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~-------------------~~~~~~a~sp  327 (373)
T d2madh_         267 GGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-------------------HDVDAISVAQ  327 (373)
T ss_pred             CcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCC-------------------CCeeEEEECC
Confidence            345677999999998766432           3444444444433222211                   1345689999


Q ss_pred             CCCEEEEEEE
Q psy7767         165 DGSILAYMKF  174 (200)
Q Consensus       165 DGk~Laf~r~  174 (200)
                      ||++++|+..
T Consensus       328 DG~~~l~vt~  337 (373)
T d2madh_         328 DGGPDLYALS  337 (373)
T ss_pred             CCCEEEEEEe
Confidence            9999887643

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.36  E-value=0.0099  Score=47.11  Aligned_cols=78  Identities=10%  Similarity=-0.012  Sum_probs=50.5

Q ss_pred             eeecCCCCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeE----EEeeCCCcceEecccccceeeeeeeCCCcceEEcc
Q psy7767          89 VSDLDGSNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSIN----ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSP  164 (200)
Q Consensus        89 v~~lt~~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~----rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSP  164 (200)
                      +..+.-...+..++|||||+.||-..++.|.+.++..+...    .+...+..                 +....+.|||
T Consensus        45 ~~~~~H~~~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~~~~~~~~~h~-----------------~~I~~v~~s~  107 (337)
T d1gxra_          45 INTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRD-----------------NYIRSCKLLP  107 (337)
T ss_dssp             EEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTT-----------------SBEEEEEECT
T ss_pred             EEECCCCCcEEEEEECCCCCEEEEEECCEEEEEEccCCcccceeEEeeecCCC-----------------CcEEEEEEcC
Confidence            33343456789999999999999887888999988764322    11111100                 1234689999


Q ss_pred             CCCEEEEEEEcCCcceEEEE
Q psy7767         165 DGSILAYMKFNDARVHNMSY  184 (200)
Q Consensus       165 DGk~Laf~r~D~s~v~~~~i  184 (200)
                      ||+.|+- ...++.+..+.+
T Consensus       108 dg~~l~s-~~~dg~i~iwd~  126 (337)
T d1gxra_         108 DGCTLIV-GGEASTLSIWDL  126 (337)
T ss_dssp             TSSEEEE-EESSSEEEEEEC
T ss_pred             CCCEEEE-eecccccccccc
Confidence            9998864 444555665543

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.33  E-value=0.0039  Score=53.09  Aligned_cols=59  Identities=10%  Similarity=0.023  Sum_probs=42.7

Q ss_pred             eeeEECcCCCEEEEEEc--C----cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          99 QLVQWSPVGHDLIFVKD--N----NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~~--g----dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....+||||+.+||..+  |    .|++.++++|+....+-.+                   ....++.|++||+.|.|.
T Consensus       128 ~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~-------------------~~~~~~~W~~D~~~~~Y~  188 (430)
T d1qfma1         128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-------------------VKFSCMAWTHDGKGMFYN  188 (430)
T ss_dssp             EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-------------------ECSCCEEECTTSSEEEEE
T ss_pred             cceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc-------------------ccccceEEcCCCCEEEEE
Confidence            45689999999999963  3    6888899988753221100                   023468999999999999


Q ss_pred             EEcC
Q psy7767         173 KFND  176 (200)
Q Consensus       173 r~D~  176 (200)
                      +.+.
T Consensus       189 ~~~~  192 (430)
T d1qfma1         189 AYPQ  192 (430)
T ss_dssp             ECCC
T ss_pred             Eecc
Confidence            8664

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=96.27  E-value=0.023  Score=43.27  Aligned_cols=65  Identities=15%  Similarity=-0.060  Sum_probs=44.6

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKF  174 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~  174 (200)
                      +.......++|+++.+ ++.++.|.+.++.+++.......+.                   ....+.|||||++|+ +..
T Consensus       240 ~~~~~~~~~~~~~~~~-~~~~~~i~v~d~~~~~~~~~~~~~~-------------------~~~~~~~s~dG~~l~-v~~  298 (337)
T d1pbyb_         240 DVFYFSTAVNPAKTRA-FGAYNVLESFDLEKNASIKRVPLPH-------------------SYYSVNVSTDGSTVW-LGG  298 (337)
T ss_dssp             SSCEEEEEECTTSSEE-EEEESEEEEEETTTTEEEEEEECSS-------------------CCCEEEECTTSCEEE-EES
T ss_pred             CcceEEEEecccceEE-EEccccEEEEECCCCcEEEEEcCCC-------------------CEEEEEECCCCCEEE-EEe
Confidence            3445677899999886 5667899999998877654433322                   345789999999884 544


Q ss_pred             cCCcce
Q psy7767         175 NDARVH  180 (200)
Q Consensus       175 D~s~v~  180 (200)
                      .++.+.
T Consensus       299 ~~~~i~  304 (337)
T d1pbyb_         299 ALGDLA  304 (337)
T ss_dssp             BSSEEE
T ss_pred             CCCcEE
Confidence            444343

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.26  E-value=0.017  Score=44.00  Aligned_cols=69  Identities=16%  Similarity=-0.050  Sum_probs=47.4

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..+.|+|+|+.|+-.. ++.|.+.++.+++.........                  +....+.|||||+.|+ ..
T Consensus       270 ~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~------------------~~V~~l~~s~d~~~l~-s~  330 (340)
T d1tbga_         270 ICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD------------------NRVSCLGVTDDGMAVA-TG  330 (340)
T ss_dssp             CSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCS------------------SCEEEEEECTTSSCEE-EE
T ss_pred             cCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCC------------------CCEEEEEEeCCCCEEE-EE
Confidence            45578999999999987765 5789999988776554332111                  1234689999999886 44


Q ss_pred             EcCCcceEE
Q psy7767         174 FNDARVHNM  182 (200)
Q Consensus       174 ~D~s~v~~~  182 (200)
                      ..++.+.++
T Consensus       331 s~Dg~v~iW  339 (340)
T d1tbga_         331 SWDSFLKIW  339 (340)
T ss_dssp             ETTSCEEEE
T ss_pred             ccCCEEEEe
Confidence            555555543

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.23  E-value=0.0088  Score=44.61  Aligned_cols=69  Identities=13%  Similarity=0.022  Sum_probs=46.8

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..+.|+|+|+.|+-.. ++.|.+.++.+++..+.-....                  +....+.|||||+.|+- .
T Consensus       247 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~------------------~~V~~~~~s~~~~~l~s-~  307 (317)
T d1vyhc1         247 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHE------------------HFVTSLDFHKTAPYVVT-G  307 (317)
T ss_dssp             SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCS------------------SCEEEEEECSSSSCEEE-E
T ss_pred             CCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCC------------------CCEEEEEEcCCCCEEEE-E
Confidence            45678899999999988775 5789999988766543322111                  12356899999998874 4


Q ss_pred             EcCCcceEE
Q psy7767         174 FNDARVHNM  182 (200)
Q Consensus       174 ~D~s~v~~~  182 (200)
                      ..++.+.++
T Consensus       308 s~Dg~i~iW  316 (317)
T d1vyhc1         308 SVDQTVKVW  316 (317)
T ss_dssp             ETTSEEEEE
T ss_pred             eCCCeEEEe
Confidence            555555543

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.14  E-value=0.013  Score=44.65  Aligned_cols=63  Identities=14%  Similarity=0.066  Sum_probs=45.2

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      .+.+..++|||||+.||-.. ++.|.+.++.+++..+......                  +....+.|+|||+.|+...
T Consensus        55 ~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~------------------~~v~~v~~~~~~~~l~~~~  116 (340)
T d1tbga_          55 LAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRS------------------SWVMTCAYAPSGNYVACGG  116 (340)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSC------------------SCEEEEEECTTSSEEEEEE
T ss_pred             CCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEeccc------------------ccEEeeEeeccceeeeeec
Confidence            46789999999999988765 5789999998776654333211                  1234689999999887654


Q ss_pred             Ec
Q psy7767         174 FN  175 (200)
Q Consensus       174 ~D  175 (200)
                      .|
T Consensus       117 ~d  118 (340)
T d1tbga_         117 LD  118 (340)
T ss_dssp             TT
T ss_pred             cc
Confidence            33

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.09  E-value=0.037  Score=43.49  Aligned_cols=77  Identities=10%  Similarity=0.085  Sum_probs=49.8

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ...+..++|+|||+.|+-.. ++.|.+.++.+++..+.-..-...+ . .          +.......|||||+.|+ ..
T Consensus       308 ~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V-~-~----------~~~~~~~~~spd~~~l~-s~  374 (388)
T d1erja_         308 KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSV-I-S----------VAVANGSSLGPEYNVFA-TG  374 (388)
T ss_dssp             SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-E-E----------EEECSSCTTCTTCEEEE-EE
T ss_pred             cceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCE-E-E----------EEEecCcccCCCCCEEE-EE
Confidence            45678999999999988775 4789999998877654332111110 0 0          00122345899998776 45


Q ss_pred             EcCCcceEEEE
Q psy7767         174 FNDARVHNMSY  184 (200)
Q Consensus       174 ~D~s~v~~~~i  184 (200)
                      .+++.+.++.+
T Consensus       375 s~Dg~I~iW~~  385 (388)
T d1erja_         375 SGDCKARIWKY  385 (388)
T ss_dssp             ETTSEEEEEEE
T ss_pred             eCCCEEEEEee
Confidence            66677877765

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.98  E-value=0.012  Score=45.00  Aligned_cols=58  Identities=10%  Similarity=0.056  Sum_probs=41.9

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      ...+..++|||||+.||-.. ++.|.+.++++++..+...++..                 +....+.|+|||+.+
T Consensus        12 ~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~-----------------~~v~~v~~~~~g~~~   70 (299)
T d1nr0a2          12 NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHA-----------------TMITGIKTTSKGDLF   70 (299)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCS-----------------SCEEEEEECTTSCEE
T ss_pred             CCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC-----------------CcEEEEEeeccceee
Confidence            45689999999999987654 46799999988877655543321                 123468899999744

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.90  E-value=0.02  Score=46.51  Aligned_cols=79  Identities=18%  Similarity=0.117  Sum_probs=47.6

Q ss_pred             CCCceeeEECcCCCEEEEEEcC----cEEEEECCCCCeEEEee-CCCc---ceEecccccceeeeeeeCCCcceEEccCC
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDN----NLYQAYDDFRSINALTR-DGIK---GVLFNGVADWVYEEEVFSSTKTLWFSPDG  166 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~g----dLyv~~~~~g~~~rLT~-dg~~---~~~~nG~pdwv~eEEi~~~~~~~~WSPDG  166 (200)
                      ...+..++|||||+.|+-....    .|.+.+++.+...+... ....   .....|-..         ...++.|||||
T Consensus       231 ~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~---------~V~~l~fspd~  301 (393)
T d1sq9a_         231 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS---------WVMSLSFNDSG  301 (393)
T ss_dssp             CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS---------CEEEEEECSSS
T ss_pred             cceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccC---------ceeeeccCCCC
Confidence            3567899999999999887532    37778888876543322 1110   000111111         23568999999


Q ss_pred             CEEEEEEEcCCcceEEE
Q psy7767         167 SILAYMKFNDARVHNMS  183 (200)
Q Consensus       167 k~Laf~r~D~s~v~~~~  183 (200)
                      +.|+ ....++.+.++.
T Consensus       302 ~~l~-S~s~D~~v~vWd  317 (393)
T d1sq9a_         302 ETLC-SAGWDGKLRFWD  317 (393)
T ss_dssp             SEEE-EEETTSEEEEEE
T ss_pred             CeeE-EECCCCEEEEEE
Confidence            9875 555556666554

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.70  E-value=0.027  Score=42.10  Aligned_cols=61  Identities=13%  Similarity=-0.023  Sum_probs=42.8

Q ss_pred             CceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          97 FLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      .+..++|||+|+.||-.. +|.|.+.++++++...-.....                   ......|||||+.|+....|
T Consensus       253 ~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~-------------------~~~~~~~s~~~~~l~~a~sd  313 (342)
T d1yfqa_         253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-------------------EDSVVKIACSDNILCLATSD  313 (342)
T ss_dssp             CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-------------------SSEEEEEEECSSEEEEEEEC
T ss_pred             cceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCC-------------------CCEEEEEEeCCCEEEEEEcC
Confidence            346789999999987664 4689999998765432221111                   23357899999999987766


Q ss_pred             C
Q psy7767         176 D  176 (200)
Q Consensus       176 ~  176 (200)
                      +
T Consensus       314 d  314 (342)
T d1yfqa_         314 D  314 (342)
T ss_dssp             T
T ss_pred             C
Confidence            5

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.56  E-value=0.011  Score=49.07  Aligned_cols=64  Identities=17%  Similarity=0.119  Sum_probs=43.8

Q ss_pred             eeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          99 QLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      ..+.+++|.+.+.+|.   +|.|.+.|+.+++...-...|.                   ...++.|||||++| |+...
T Consensus        22 ~~~~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g~-------------------~~~~vafSPDGk~l-~~~~~   81 (426)
T d1hzua2          22 KKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-------------------AVHISRMSASGRYL-LVIGR   81 (426)
T ss_dssp             SSCCSCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECCS-------------------SEEEEEECTTSCEE-EEEET
T ss_pred             CcccccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCCC-------------------CeeEEEECCCCCEE-EEEeC
Confidence            4456888888887775   4689999999887754444332                   23468999999987 45555


Q ss_pred             CCcceEE
Q psy7767         176 DARVHNM  182 (200)
Q Consensus       176 ~s~v~~~  182 (200)
                      ++.+..+
T Consensus        82 d~~v~vw   88 (426)
T d1hzua2          82 DARIDMI   88 (426)
T ss_dssp             TSEEEEE
T ss_pred             CCCEEEE
Confidence            4544433

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.56  E-value=0.077  Score=41.96  Aligned_cols=70  Identities=14%  Similarity=0.104  Sum_probs=43.8

Q ss_pred             CCCceeeEECcCCCEEEEEEcC---cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDN---NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~g---dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ...+..++|+|||+.|+-+..+   .+.+.+.+.++..+.-. +..                 +....+.|+|||+.++.
T Consensus       102 ~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~-~h~-----------------~~v~~v~~~~~~~~~l~  163 (311)
T d1nr0a1         102 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT-GQA-----------------RAMNSVDFKPSRPFRII  163 (311)
T ss_dssp             SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCC-CCS-----------------SCEEEEEECSSSSCEEE
T ss_pred             cCcccccccccccccccccccccccccccccccccccccccc-ccc-----------------cccccccccccceeeec
Confidence            4678999999999999888643   36667777654432111 100                 12346789999987544


Q ss_pred             EEEcCCcceEE
Q psy7767         172 MKFNDARVHNM  182 (200)
Q Consensus       172 ~r~D~s~v~~~  182 (200)
                      .-.+++.+..+
T Consensus       164 sgs~d~~i~i~  174 (311)
T d1nr0a1         164 SGSDDNTVAIF  174 (311)
T ss_dssp             EEETTSCEEEE
T ss_pred             ccccccccccc
Confidence            44555555554

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.20  E-value=0.042  Score=41.81  Aligned_cols=74  Identities=18%  Similarity=0.001  Sum_probs=47.2

Q ss_pred             CCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ....+..++|+|+|+.|+... ++.|++.++.++........-.      +..         .....+.|||||+.|+..
T Consensus       178 ~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~------~h~---------~~v~~l~~s~~~~~l~sg  242 (299)
T d1nr0a2         178 HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWT------FHT---------AKVACVSWSPDNVRLATG  242 (299)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCC------CCS---------SCEEEEEECTTSSEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccc------ccc---------cccccccccccccceEEE
Confidence            356788999999999987764 4689998887655432221110      000         123467899999988754


Q ss_pred             EEcCCcceEEE
Q psy7767         173 KFNDARVHNMS  183 (200)
Q Consensus       173 r~D~s~v~~~~  183 (200)
                      . .++.+..+.
T Consensus       243 s-~dg~i~iwd  252 (299)
T d1nr0a2         243 S-LDNSVIVWN  252 (299)
T ss_dssp             E-TTSCEEEEE
T ss_pred             c-CCCEEEEEE
Confidence            4 445555554

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.20  E-value=0.036  Score=41.43  Aligned_cols=74  Identities=11%  Similarity=0.100  Sum_probs=46.9

Q ss_pred             CCCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCe-EEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          94 GSNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSI-NALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        94 ~~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~-~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      +...+..++|||||+.||-.. ++.|.+.+++.+.. ..+....       +..         +....+.|+|++..+++
T Consensus        10 h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~-------~h~---------~~V~~v~f~~~~~~~l~   73 (342)
T d1yfqa_          10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-------RYK---------HPLLCCNFIDNTDLQIY   73 (342)
T ss_dssp             CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-------ECS---------SCEEEEEEEESSSEEEE
T ss_pred             CCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEec-------CCC---------CCEEEEEEeCCCCCEEE
Confidence            356789999999999998875 57788887765432 2222100       000         12346789998877766


Q ss_pred             EEEcCCcceEEE
Q psy7767         172 MKFNDARVHNMS  183 (200)
Q Consensus       172 ~r~D~s~v~~~~  183 (200)
                      ....++.+..+.
T Consensus        74 sg~~d~~v~~w~   85 (342)
T d1yfqa_          74 VGTVQGEILKVD   85 (342)
T ss_dssp             EEETTSCEEEEC
T ss_pred             Ecccccceeeee
Confidence            666665555443

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.05  E-value=0.051  Score=40.18  Aligned_cols=62  Identities=15%  Similarity=0.127  Sum_probs=43.5

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      .+.+..++|||||+.||=.. ++.|.+.++++++..+......                  +....+.|+|+|..++...
T Consensus        17 ~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~------------------~~V~~~~~~~~~~~~~~~~   78 (317)
T d1vyhc1          17 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT------------------DSVQDISFDHSGKLLASCS   78 (317)
T ss_dssp             SSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCS------------------SCEEEEEECTTSSEEEEEE
T ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCC------------------CcEEEEeeecccccccccc
Confidence            45789999999999887664 5789999998776543332111                  1234678999999887654


Q ss_pred             E
Q psy7767         174 F  174 (200)
Q Consensus       174 ~  174 (200)
                      .
T Consensus        79 ~   79 (317)
T d1vyhc1          79 A   79 (317)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=94.52  E-value=0.03  Score=44.95  Aligned_cols=59  Identities=12%  Similarity=0.141  Sum_probs=39.3

Q ss_pred             ceeeEECcCCCEEEEEEc----------CcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCC
Q psy7767          98 LQLVQWSPVGHDLIFVKD----------NNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGS  167 (200)
Q Consensus        98 is~~~wSPDGk~IAFV~~----------gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk  167 (200)
                      ...++++|+|+.+.....          +.|++.+..+++..+-...+.                   ...++.|||||+
T Consensus       266 ~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~-------------------~~~~~a~spDG~  326 (368)
T d1mdah_         266 FQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-------------------DSDAIIAAQDGA  326 (368)
T ss_dssp             SSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-------------------EECEEEECCSSS
T ss_pred             ceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCCC-------------------ceeEEEECCCCC
Confidence            456789999998765532          258888887776432222111                   234689999999


Q ss_pred             EEEEEEEc
Q psy7767         168 ILAYMKFN  175 (200)
Q Consensus       168 ~Laf~r~D  175 (200)
                      .++|+...
T Consensus       327 ~~ly~s~~  334 (368)
T d1mdah_         327 SDNYANSA  334 (368)
T ss_dssp             CEEEEEET
T ss_pred             EEEEEEeC
Confidence            88888654

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=94.40  E-value=0.15  Score=41.03  Aligned_cols=28  Identities=21%  Similarity=0.299  Sum_probs=18.4

Q ss_pred             CCCcceEEccCCCEEEEEEEcCCcceEE
Q psy7767         155 SSTKTLWFSPDGSILAYMKFNDARVHNM  182 (200)
Q Consensus       155 ~~~~~~~WSPDGk~Laf~r~D~s~v~~~  182 (200)
                      ....++.|||||+.|.+.-.....+..|
T Consensus       177 ~~pnGia~s~dg~~lyvad~~~~~I~~~  204 (319)
T d2dg1a1         177 SVANGIALSTDEKVLWVTETTANRLHRI  204 (319)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred             ceeeeeeeccccceEEEecccCCceEEE
Confidence            3566789999999886654444434333

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=93.82  E-value=0.28  Score=40.92  Aligned_cols=64  Identities=5%  Similarity=-0.203  Sum_probs=40.9

Q ss_pred             CCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          96 NFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        96 ~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      ........||||+.+++..  .+.|++.+..+++..+++.-+      .|           .....+.+||||++++...
T Consensus       163 ~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~------~g-----------~~~~~~~~spdg~~~~va~  225 (432)
T d1qksa2         163 PRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS------AE-----------RFLHDGGLDGSHRYFITAA  225 (432)
T ss_dssp             CCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE------CC-----------SSEEEEEECTTSCEEEEEE
T ss_pred             CceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEc------cc-----------CccccceECCCCCEEEEec
Confidence            3345567899998877665  357888888776655444311      01           0234678999999886654


Q ss_pred             EcC
Q psy7767         174 FND  176 (200)
Q Consensus       174 ~D~  176 (200)
                      .+.
T Consensus       226 ~~~  228 (432)
T d1qksa2         226 NAR  228 (432)
T ss_dssp             GGG
T ss_pred             ccc
Confidence            443

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=93.41  E-value=0.15  Score=41.11  Aligned_cols=72  Identities=21%  Similarity=0.278  Sum_probs=41.1

Q ss_pred             EEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEcCCcceEEEEEeeCC
Q psy7767         110 LIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFNDARVHNMSYIHYGE  189 (200)
Q Consensus       110 IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D~s~v~~~~i~~~~~  189 (200)
                      |++-.+|+||+.+...+...+++.++......-..|        .....++.|.|||+.|.....+.+.+..+.++..+.
T Consensus       231 iavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p--------~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G~  302 (314)
T d1pjxa_         231 MDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP--------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNGK  302 (314)
T ss_dssp             EEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS--------SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCBC
T ss_pred             eEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECC--------CCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCCCh
Confidence            555566788887766677777776653211000111        124567899999998744334444455555544444

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=93.11  E-value=0.37  Score=37.82  Aligned_cols=66  Identities=15%  Similarity=0.237  Sum_probs=35.0

Q ss_pred             cCCCCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEE
Q psy7767          92 LDGSNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSIL  169 (200)
Q Consensus        92 lt~~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~L  169 (200)
                      +..+..+..++++|||+ |.++.  ++.||..+.+ |+...+...+                   +...++.|+|||+ |
T Consensus        24 ~p~~~~~e~iAv~pdG~-l~vt~~~~~~I~~i~p~-g~~~~~~~~~-------------------~~~~gla~~~dG~-l   81 (302)
T d2p4oa1          24 FPVNTFLENLASAPDGT-IFVTNHEVGEIVSITPD-GNQQIHATVE-------------------GKVSGLAFTSNGD-L   81 (302)
T ss_dssp             ECTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-CCEEEEEECS-------------------SEEEEEEECTTSC-E
T ss_pred             CCCCCCcCCEEECCCCC-EEEEeCCCCEEEEEeCC-CCEEEEEcCC-------------------CCcceEEEcCCCC-e
Confidence            33345567788888887 32332  3456665533 2333222211                   2345788999998 4


Q ss_pred             EEEEEcCCcc
Q psy7767         170 AYMKFNDARV  179 (200)
Q Consensus       170 af~r~D~s~v  179 (200)
                      ..+..+...+
T Consensus        82 ~v~~~~~~~~   91 (302)
T d2p4oa1          82 VATGWNADSI   91 (302)
T ss_dssp             EEEEECTTSC
T ss_pred             EEEecCCceE
Confidence            3444444433

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.07  E-value=0.37  Score=37.65  Aligned_cols=71  Identities=10%  Similarity=-0.016  Sum_probs=46.0

Q ss_pred             CCCceeeEECcCCCEEEEEEcC---cEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDN---NLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~g---dLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ...+..+.|+|||+.|+.+..+   .+.+.+.+.++..+......                  .....+.|+|++..++.
T Consensus       115 ~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~------------------~~v~~~~~~~~~~~~~~  176 (325)
T d1pgua1         115 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHS------------------QRINACHLKQSRPMRSM  176 (325)
T ss_dssp             SSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCS------------------SCEEEEEECSSSSCEEE
T ss_pred             cCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecc------------------cccccccccccccceEE
Confidence            4568899999999999988643   45566666655433222111                  12345789999988776


Q ss_pred             EEEcCCcceEEE
Q psy7767         172 MKFNDARVHNMS  183 (200)
Q Consensus       172 ~r~D~s~v~~~~  183 (200)
                      ...+++.+..+.
T Consensus       177 ~~~~d~~v~~~d  188 (325)
T d1pgua1         177 TVGDDGSVVFYQ  188 (325)
T ss_dssp             EEETTTEEEEEE
T ss_pred             Eeeccccccccc
Confidence            666666555443

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.58  E-value=0.22  Score=39.96  Aligned_cols=70  Identities=19%  Similarity=0.112  Sum_probs=41.4

Q ss_pred             CCCceeeEECcCCCEEEEE-EcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFV-KDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMK  173 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV-~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r  173 (200)
                      +..+..++||||| .||-. .++.|.+.++.+++......... .  ..|..         .....+.|||||+.|+-..
T Consensus       184 ~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~-~--l~~h~---------~~V~~l~~spdg~~l~sgs  250 (393)
T d1sq9a_         184 SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQH-S--MINNS---------NSIRSVKFSPQGSLLAIAH  250 (393)
T ss_dssp             CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC------CCC---------CCEEEEEECSSTTEEEEEE
T ss_pred             CCcEEEEEECCCC-EEEEEeCCCcEEEEeeccccccccccccc-c--ccccc---------ceEEEcccccccceeeeec
Confidence            3446778999998 43322 35679999988776543222111 0  11111         1235688999999987666


Q ss_pred             EcCC
Q psy7767         174 FNDA  177 (200)
Q Consensus       174 ~D~s  177 (200)
                      .|.+
T Consensus       251 ~D~t  254 (393)
T d1sq9a_         251 DSNS  254 (393)
T ss_dssp             EETT
T ss_pred             CCCC
Confidence            6554

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.25  E-value=0.33  Score=36.33  Aligned_cols=35  Identities=9%  Similarity=-0.048  Sum_probs=27.2

Q ss_pred             CCCceeeEECcCCCEEEEEE-cCcEEEEECCCCCeE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK-DNNLYQAYDDFRSIN  129 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~  129 (200)
                      ...+..++|||||+.|+-.. ++.|.+.++.++...
T Consensus       162 ~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~  197 (287)
T d1pgua2         162 RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVK  197 (287)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred             CCceeEEEeccCccccccccccccccceeecccccc
Confidence            35578999999999987764 568999988765543

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=91.05  E-value=0.93  Score=39.20  Aligned_cols=20  Identities=5%  Similarity=0.027  Sum_probs=15.6

Q ss_pred             ecCCCCCceeeEECcCCCEE
Q psy7767          91 DLDGSNFLQLVQWSPVGHDL  110 (200)
Q Consensus        91 ~lt~~~~is~~~wSPDGk~I  110 (200)
                      .+..+.+....++||||+++
T Consensus       111 ~iP~g~gphgi~~spdg~t~  130 (441)
T d1qnia2         111 HIPNVQAIHGLRLQKVPKTN  130 (441)
T ss_dssp             ECTTCCCEEEEEECCSSBCC
T ss_pred             ecCCCCCccceEEeccCCEE
Confidence            34446788889999999964

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=89.98  E-value=0.69  Score=37.59  Aligned_cols=70  Identities=14%  Similarity=0.175  Sum_probs=38.6

Q ss_pred             CceeeEECcCCCEEEEEEc--CcEEEEECCC-CCeEEEee--CCCcceEecccccceeeeeeeCCCcceEEccCCCEEEE
Q psy7767          97 FLQLVQWSPVGHDLIFVKD--NNLYQAYDDF-RSINALTR--DGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAY  171 (200)
Q Consensus        97 ~is~~~wSPDGk~IAFV~~--gdLyv~~~~~-g~~~rLT~--dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf  171 (200)
                      ....+.++|||+.+.-+..  +.|++.+.+. +....+..  ....     |           ...+.+.|+|||+++ |
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~-----g-----------~gPr~i~f~pdg~~~-y  208 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP-----G-----------DHPRWVAMHPTGNYL-Y  208 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST-----T-----------CCEEEEEECTTSSEE-E
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCC-----C-----------CceEEEEECCCCceE-E
Confidence            3467899999999865543  3577765443 22221211  0000     0           145678999999865 5


Q ss_pred             EEE-cCCcceEEE
Q psy7767         172 MKF-NDARVHNMS  183 (200)
Q Consensus       172 ~r~-D~s~v~~~~  183 (200)
                      +.. ....+..|.
T Consensus       209 v~~e~~~~V~v~~  221 (365)
T d1jofa_         209 ALMEAGNRICEYV  221 (365)
T ss_dssp             EEETTTTEEEEEE
T ss_pred             EeccCCCEEEEEE
Confidence            533 333344443

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=86.99  E-value=3.5  Score=33.11  Aligned_cols=28  Identities=0%  Similarity=-0.084  Sum_probs=19.5

Q ss_pred             CCCceeeEECcCCCEEEEEEcCcEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVKDNNLYQAY  122 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~~gdLyv~~  122 (200)
                      ....+.+++||||+.|.-+.++.+....
T Consensus        39 ~~~~s~la~s~d~~~ly~~~~~~~~~~~   66 (365)
T d1jofa_          39 DEPISWMTFDHERKNIYGAAMKKWSSFA   66 (365)
T ss_dssp             TCCCSEEEECTTSSEEEEEEBTEEEEEE
T ss_pred             CCCCCEEEEcCCCCEEEEEeCCcEEEEE
Confidence            3456789999999998666666544433

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=86.73  E-value=0.64  Score=36.35  Aligned_cols=55  Identities=16%  Similarity=0.236  Sum_probs=32.8

Q ss_pred             EEEEEcCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEE---ccCCCEEEE
Q psy7767         110 LIFVKDNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWF---SPDGSILAY  171 (200)
Q Consensus       110 IAFV~~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~W---SPDGk~Laf  171 (200)
                      |+|-.+|+||+....+++..+++.+|+...+....       .-+....++.|   +||++.|..
T Consensus       213 ia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~~-------~~~~~pt~vafg~~~~D~~~Lyv  270 (302)
T d2p4oa1         213 FAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAE-------QGVIGSTAVAFGQTEGDCTAIYV  270 (302)
T ss_dssp             EEEBTTCCEEEECBTTCCEEEECTTCCEEEEECGG-------GTCTTEEEEEECCSTTTTTEEEE
T ss_pred             eEECCCCCEEEEEcCCCcEEEECCCCCEEEEEecC-------CCCCCceEEEEcCCCCCCCEEEE
Confidence            66666677888777677777887776532211110       00123456788   789988743

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.56  E-value=5.5  Score=30.44  Aligned_cols=74  Identities=14%  Similarity=0.048  Sum_probs=44.8

Q ss_pred             CCCceeeEECcCCCEEEEEE--cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEE
Q psy7767          95 SNFLQLVQWSPVGHDLIFVK--DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYM  172 (200)
Q Consensus        95 ~~~is~~~wSPDGk~IAFV~--~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~  172 (200)
                      ...+....|+|+++.++.+.  ++.+.+.+...++...-.....      +..         +....+.||||+..++..
T Consensus       159 ~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~------~~~---------~~v~~v~~~pd~~~~l~s  223 (325)
T d1pgua1         159 SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH------KQG---------SFVRDVEFSPDSGEFVIT  223 (325)
T ss_dssp             SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS------CTT---------CCEEEEEECSTTCCEEEE
T ss_pred             ccccccccccccccceEEEeecccccccccccccccceeccccc------CCC---------CccEEeeeccccceeccc
Confidence            45678899999998866654  5678887776544332211111      100         123467899987666556


Q ss_pred             EEcCCcceEEE
Q psy7767         173 KFNDARVHNMS  183 (200)
Q Consensus       173 r~D~s~v~~~~  183 (200)
                      ...++.+..+.
T Consensus       224 ~~~d~~i~iwd  234 (325)
T d1pgua1         224 VGSDRKISCFD  234 (325)
T ss_dssp             EETTCCEEEEE
T ss_pred             cccccceeeee
Confidence            66666666653

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=84.45  E-value=0.39  Score=41.71  Aligned_cols=54  Identities=11%  Similarity=0.028  Sum_probs=37.7

Q ss_pred             eeeEECcCCCEEEEEE---cCcEEEEECCCCCeEEEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEE
Q psy7767          99 QLVQWSPVGHDLIFVK---DNNLYQAYDDFRSINALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILA  170 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~---~gdLyv~~~~~g~~~rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~La  170 (200)
                      +....+|||++| ||.   ++.|-+.++++.+..++..-+.      |           ....++++||||+++.
T Consensus        75 s~t~gtpDGr~l-fV~d~~~~rVavIDl~t~k~~~ii~iP~------g-----------~gphgi~~spdg~t~Y  131 (441)
T d1qnia2          75 SMTDGRYDGKYL-FINDKANTRVARIRLDIMKTDKITHIPN------V-----------QAIHGLRLQKVPKTNY  131 (441)
T ss_dssp             EEETTEEEEEEE-EEEETTTTEEEEEETTTTEEEEEEECTT------C-----------CCEEEEEECCSSBCCE
T ss_pred             ceecccCCCCEE-EEEcCCCCEEEEEECCCCcEeeEEecCC------C-----------CCccceEEeccCCEEE
Confidence            444568999997 665   3579999999988877765321      1           1344678999999653

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=82.93  E-value=1.8  Score=34.29  Aligned_cols=13  Identities=15%  Similarity=0.376  Sum_probs=9.7

Q ss_pred             CCcceEEccCCCE
Q psy7767         156 STKTLWFSPDGSI  168 (200)
Q Consensus       156 ~~~~~~WSPDGk~  168 (200)
                      ...++.++|||+.
T Consensus        83 ~p~gla~~~dG~l   95 (319)
T d2dg1a1          83 NPAAIKIHKDGRL   95 (319)
T ss_dssp             SEEEEEECTTSCE
T ss_pred             CeeEEEECCCCCE
Confidence            3457889999973

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.67  E-value=5.2  Score=28.98  Aligned_cols=63  Identities=11%  Similarity=-0.131  Sum_probs=37.4

Q ss_pred             eeeEECcCCCEEEEEE-cCcEEEEECCCCCeE-EEeeCCCcceEecccccceeeeeeeCCCcceEEccCCCEEEEEEEc
Q psy7767          99 QLVQWSPVGHDLIFVK-DNNLYQAYDDFRSIN-ALTRDGIKGVLFNGVADWVYEEEVFSSTKTLWFSPDGSILAYMKFN  175 (200)
Q Consensus        99 s~~~wSPDGk~IAFV~-~gdLyv~~~~~g~~~-rLT~dg~~~~~~nG~pdwv~eEEi~~~~~~~~WSPDGk~Laf~r~D  175 (200)
                      .-..++++++.++-.. ++.|.+.++.+|+.. .+......     |..         +....+.|||||..||.-..|
T Consensus       262 ~~~~~~~~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~-----~~~---------~~v~~v~~s~~~~~la~g~~d  326 (342)
T d2ovrb2         262 AVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG-----GSG---------GVVWRIRASNTKLVCAVGSRN  326 (342)
T ss_dssp             CEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTG-----GGT---------CEEEEEEECSSEEEEEEECSS
T ss_pred             ceeecccCCCeeEEEcCCCEEEEEECCCCCEEEEEecccCC-----CCC---------CCEEEEEECCCCCEEEEEeCC
Confidence            3445666777776654 568999999888764 33322110     100         123468999999766654333